Query psy12803
Match_columns 902
No_of_seqs 817 out of 3776
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 20:07:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12803.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12803hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j8h_A Titin, connectin; cardi 99.9 5.6E-21 1.9E-25 193.0 16.0 167 295-468 8-197 (197)
2 2v5t_A NCAM2, N-CAM 2, neural 99.8 5.4E-21 1.8E-25 191.2 14.9 164 295-467 6-187 (189)
3 2a38_A Titin; Z1Z2, structural 99.8 5.1E-21 1.8E-25 192.5 14.6 166 295-467 9-194 (194)
4 4fa8_A Secreted protein BARF1; 99.8 1.6E-21 5.6E-26 201.4 11.0 157 300-461 2-195 (203)
5 3rbs_A Myomesin-1; immunoglobu 99.8 4.2E-21 1.4E-25 198.6 13.8 158 300-467 11-206 (207)
6 3b43_A Titin; I-SET IG fold, e 99.8 2.2E-21 7.6E-26 230.4 12.5 196 264-471 269-479 (570)
7 2wv3_A Neuroplastin; igcam, me 99.8 2.3E-20 7.8E-25 188.1 18.0 164 295-467 6-189 (190)
8 2iep_A Muscle-specific kinase 99.8 5.2E-21 1.8E-25 192.2 13.0 163 297-469 13-191 (192)
9 2rik_A Titin; I-SET IG fold, p 99.8 1.9E-20 6.7E-25 200.2 17.7 169 297-472 11-195 (284)
10 1qz1_A Neural cell adhesion mo 99.8 8.3E-21 2.8E-25 203.5 14.8 165 297-468 106-290 (291)
11 3ojm_B Fibroblast growth facto 99.8 7.9E-21 2.7E-25 196.1 13.6 176 298-473 26-226 (231)
12 3grw_A Fibroblast growth facto 99.8 3E-20 1E-24 193.8 17.7 188 285-473 10-223 (241)
13 2v44_A NCAM2, neural cell adhe 99.8 4.2E-20 1.4E-24 185.5 17.8 160 296-465 7-184 (189)
14 2yd1_A Tyrosine-protein phosph 99.8 3E-20 1E-24 190.8 16.8 167 295-471 10-203 (212)
15 1epf_A NCAM, protein (neural c 99.8 3.5E-20 1.2E-24 186.2 17.0 163 296-466 7-189 (191)
16 2wim_A N-CAM 2, NCAM2, neural 99.8 9.2E-21 3.2E-25 203.2 12.3 166 297-471 104-287 (291)
17 3s97_C Contactin-1; carbonic a 99.8 3.1E-20 1E-24 187.4 15.4 160 297-467 14-200 (201)
18 2x1w_L Vascular endothelial gr 99.8 4.7E-20 1.6E-24 190.2 17.0 172 297-471 13-210 (213)
19 3b43_A Titin; I-SET IG fold, e 99.8 1.5E-20 5.3E-25 223.2 15.3 192 264-468 363-570 (570)
20 3kld_A Contactin 4, axcam, BIG 99.8 2.8E-20 9.5E-25 209.5 15.8 159 297-468 211-383 (384)
21 2rik_A Titin; I-SET IG fold, p 99.8 2.6E-20 8.9E-25 199.2 14.6 162 299-467 107-283 (284)
22 2c5d_C AXL oncogene, tyrosine- 99.8 3.6E-20 1.2E-24 187.2 14.7 159 294-466 5-191 (195)
23 2yd6_A PTPRD protein; hydrolas 99.8 3.8E-20 1.3E-24 190.3 14.6 168 296-469 11-205 (212)
24 1rhf_A Tyrosine-protein kinase 99.8 5.8E-20 2E-24 183.3 14.7 155 297-467 8-182 (182)
25 3lcy_A Titin; A-BAND, IG tande 99.8 4.8E-20 1.6E-24 185.3 14.1 164 296-468 12-196 (197)
26 3laf_A Deleted in colorectal c 99.8 4.7E-20 1.6E-24 207.2 15.4 195 264-469 193-402 (403)
27 2va4_A NCAM2, N-CAM 2, neural 99.8 8.4E-20 2.9E-24 183.0 15.2 162 299-467 12-192 (192)
28 1qz1_A Neural cell adhesion mo 99.8 6E-20 2.1E-24 196.8 14.0 167 296-470 7-195 (291)
29 2jll_A NCAM2, neural cell adhe 99.8 2E-19 6.7E-24 201.3 18.5 172 295-471 4-197 (389)
30 2r15_A Myomesin-1; sarcomeric 99.8 1.9E-19 6.6E-24 183.6 16.6 160 303-468 14-210 (212)
31 2yd9_A Receptor-type tyrosine- 99.8 8.7E-20 3E-24 197.8 14.2 163 296-471 113-294 (304)
32 3p3y_A Neurofascin; IG domains 99.8 1.2E-19 4.2E-24 203.6 15.6 158 300-468 231-403 (404)
33 3b5h_A Cervical EMMPRIN, HAB18 99.8 6.8E-19 2.3E-23 176.1 17.5 157 301-468 8-183 (184)
34 2nzi_A Titin; IG-domain, FNIII 99.8 3.4E-19 1.2E-23 192.6 16.4 171 295-472 8-201 (305)
35 2ny1_B T-cell surface glycopro 99.8 5.4E-19 1.9E-23 177.2 16.8 155 300-471 4-182 (184)
36 2wim_A N-CAM 2, NCAM2, neural 99.8 2.1E-19 7.2E-24 192.6 14.4 168 295-472 8-195 (291)
37 3sgj_C Human FCG3A receptor; r 99.8 3.3E-19 1.1E-23 183.5 15.0 151 297-472 13-178 (204)
38 1f97_A Junction adhesion molec 99.8 1.2E-19 4.2E-24 184.5 11.5 165 297-468 7-207 (212)
39 3k0w_A Mucosa-associated lymph 99.8 4E-19 1.4E-23 183.8 15.5 152 294-469 21-203 (218)
40 2o26_X MAST/stem cell growth f 99.8 6.2E-19 2.1E-23 189.5 17.4 168 297-470 97-290 (290)
41 3ejj_X Macrophage colony-stimu 99.8 7.3E-19 2.5E-23 188.2 17.8 171 295-471 93-284 (289)
42 1itb_B Type 1 interleukin-1 re 99.8 6E-19 2.1E-23 191.7 17.1 167 300-468 112-314 (315)
43 2vr9_A Roundabout 1, ROBO; imm 99.8 2.1E-19 7.2E-24 184.5 12.2 167 295-469 13-207 (217)
44 3qs9_E FL cytokine receptor; i 99.8 1.8E-19 6.3E-24 212.5 13.1 192 263-472 206-418 (527)
45 4frw_A Poliovirus receptor-rel 99.8 1.1E-18 3.9E-23 177.0 17.1 167 295-467 3-210 (218)
46 2ifg_A High affinity nerve gro 99.8 2.9E-19 1E-23 198.6 13.8 170 296-470 163-347 (347)
47 3qs7_E FL cytokine receptor; i 99.8 3E-19 1E-23 204.9 14.1 192 263-472 206-418 (423)
48 2v9r_A Roundabout homolog 1; p 99.8 2.2E-19 7.4E-24 183.0 11.4 168 295-472 13-206 (212)
49 2ec8_A MAST/stem cell growth f 99.8 5.8E-19 2E-23 206.6 16.5 173 297-471 217-414 (524)
50 3p2t_A Leukocyte immunoglobuli 99.8 4.2E-19 1.4E-23 180.3 12.8 150 297-456 11-179 (196)
51 3jz7_A MCAR, CAR, coxsackievir 99.8 1.4E-19 4.8E-24 184.1 9.3 162 299-469 8-213 (214)
52 1bih_A Hemolin; insect immunit 99.8 1.3E-18 4.4E-23 194.8 18.0 159 297-467 218-395 (395)
53 1cs6_A Axonin-1; neural cell a 99.8 4.9E-19 1.7E-23 197.9 14.4 154 298-467 214-381 (382)
54 2yd9_A Receptor-type tyrosine- 99.8 1.7E-19 5.9E-24 195.4 9.8 164 295-467 10-200 (304)
55 3bp6_B Programmed cell death 1 99.8 1.7E-18 5.7E-23 176.2 16.3 163 299-470 10-195 (202)
56 4f80_A Butyrophilin subfamily 99.8 5.8E-19 2E-23 183.3 12.8 166 299-469 12-214 (226)
57 3laf_A Deleted in colorectal c 99.8 4.4E-19 1.5E-23 199.2 12.2 166 297-471 127-314 (403)
58 1nbq_A JAM, junctional adhesio 99.8 4.4E-20 1.5E-24 187.4 3.5 170 297-466 10-207 (209)
59 2d3v_A Leukocyte immunoglobuli 99.8 4.2E-19 1.4E-23 180.5 10.3 149 301-457 14-181 (196)
60 1fnl_A Low affinity immunoglob 99.8 1.3E-18 4.5E-23 173.5 13.7 147 297-468 13-174 (175)
61 1f2q_A High affinity immunoglo 99.8 1.4E-18 4.6E-23 173.4 13.7 150 297-471 10-174 (176)
62 1ry7_B FGFR-3, fibroblast grow 99.8 9.6E-19 3.3E-23 191.8 13.8 173 300-472 132-331 (334)
63 3kld_A Contactin 4, axcam, BIG 99.8 3E-19 1E-23 201.1 9.9 193 264-471 79-297 (384)
64 2v5m_A Dscam; neurobiology SPL 99.8 1.2E-18 4.2E-23 194.8 14.4 151 299-466 220-387 (388)
65 3d9a_L Light chain of hyhel10 99.8 1.2E-18 4.1E-23 178.5 12.4 168 297-464 7-209 (213)
66 3r4d_A CEA-related cell adhesi 99.8 2.4E-18 8.2E-23 175.1 13.9 161 299-471 7-203 (208)
67 4i0k_A CD276 antigen; immunogl 99.8 3E-18 1E-22 176.5 14.8 168 300-472 4-210 (222)
68 1ugn_A LIR1, leukocyte immunog 99.8 2.1E-18 7.3E-23 175.4 13.5 159 301-467 14-197 (198)
69 4dkd_C Macrophage colony-stimu 99.8 3.5E-18 1.2E-22 183.1 15.8 170 295-471 93-284 (292)
70 3ry4_A Low affinity immunoglob 99.8 8.5E-18 2.9E-22 165.8 16.6 145 297-466 10-169 (170)
71 3p3y_A Neurofascin; IG domains 99.8 8.1E-19 2.8E-23 196.9 10.4 193 264-471 93-314 (404)
72 3sbw_C Programmed cell death 1 99.8 8.9E-18 3E-22 172.7 17.4 170 298-471 8-214 (222)
73 2fbo_J V1V2;, variable region- 99.8 1.3E-18 4.3E-23 182.3 11.1 169 298-466 9-250 (250)
74 3oq3_B IFN-alpha/beta binding 99.8 2.9E-18 9.9E-23 188.7 14.4 161 302-466 139-328 (329)
75 3o4o_C Interleukin-1 receptor 99.8 2.5E-18 8.5E-23 189.1 13.2 168 295-470 22-222 (339)
76 1lk3_L 9D7 light chain; antige 99.8 3.2E-18 1.1E-22 175.3 13.0 161 298-458 7-202 (210)
77 2gi7_A GPVI protein; IG-like d 99.8 3.4E-18 1.2E-22 172.3 12.8 133 301-456 17-168 (184)
78 1vca_A VCAM-D1,2, human vascul 99.8 8.6E-18 2.9E-22 172.7 15.8 165 301-471 11-200 (202)
79 2y23_A Myomesin; structural pr 99.8 5.4E-18 1.8E-22 183.2 14.9 158 300-467 116-311 (312)
80 1uct_A Immunoglobulin alpha FC 99.7 3.2E-18 1.1E-22 178.2 12.5 156 301-469 18-199 (218)
81 3rjd_A High affinity immunoglo 99.7 5.3E-18 1.8E-22 178.5 14.1 151 296-470 6-169 (262)
82 3mj8_L Stimulatory hamster ant 99.7 2.7E-18 9.1E-23 175.9 11.4 163 300-464 9-209 (213)
83 1ry7_B FGFR-3, fibroblast grow 99.7 7.7E-19 2.6E-23 192.5 7.7 168 295-471 12-219 (334)
84 2y25_A Myomesin; structural pr 99.7 1.1E-17 3.9E-22 181.1 16.7 163 301-469 108-316 (317)
85 2pet_A Lutheran blood group gl 99.7 6.8E-18 2.3E-22 174.4 13.2 170 297-466 6-229 (231)
86 1cs6_A Axonin-1; neural cell a 99.7 3.1E-18 1.1E-22 191.3 11.2 191 264-471 78-296 (382)
87 2ec8_A MAST/stem cell growth f 99.7 2.4E-17 8.2E-22 192.8 19.1 173 297-472 120-313 (524)
88 3nl4_L Antigen binding fragmen 99.7 9.4E-18 3.2E-22 171.8 13.7 156 297-452 7-198 (213)
89 1oll_A NK receptor; immune sys 99.7 1.1E-17 3.8E-22 169.1 13.9 152 302-467 14-187 (188)
90 4fmk_A Poliovirus receptor-rel 99.7 2.9E-17 9.8E-22 167.5 17.0 166 297-466 7-215 (225)
91 1hng_A CD2; T lymphocyte adhes 99.7 5.1E-18 1.7E-22 170.5 10.8 149 300-466 5-174 (176)
92 2rcj_C Light chain; immunoglob 99.7 1.9E-17 6.5E-22 193.7 17.2 169 297-469 120-317 (523)
93 1q0x_L FAB 9B1, light chain; a 99.7 1.1E-17 3.7E-22 171.4 13.0 164 298-462 7-209 (212)
94 2y25_A Myomesin; structural pr 99.7 8.6E-19 2.9E-23 190.0 5.0 162 298-467 13-199 (317)
95 4dep_C Interleukin-1 receptor 99.7 4E-18 1.4E-22 188.2 10.2 168 298-468 127-333 (349)
96 3mj6_A Junctional adhesion mol 99.7 9.8E-18 3.4E-22 177.8 12.2 173 297-472 11-241 (268)
97 2v5m_A Dscam; neurobiology SPL 99.7 7.7E-18 2.6E-22 188.3 11.6 194 264-471 81-309 (388)
98 4dep_C Interleukin-1 receptor 99.7 1.2E-17 3.9E-22 184.5 12.9 161 298-469 14-218 (349)
99 3sob_L Antibody light chain; b 99.7 1.6E-17 5.6E-22 172.5 13.2 168 297-464 30-232 (237)
100 4fqp_A Poliovirus receptor; im 99.7 1E-17 3.5E-22 182.5 12.1 162 298-472 124-308 (313)
101 3mjg_X Beta-type platelet-deri 99.7 5.2E-17 1.8E-21 174.1 17.4 161 301-472 105-282 (289)
102 3oq3_B IFN-alpha/beta binding 99.7 6.9E-18 2.4E-22 185.7 10.7 158 299-470 37-226 (329)
103 3r06_A Anti-mouse CD3epsilon a 99.7 2E-17 6.9E-22 169.4 13.0 163 297-459 7-204 (213)
104 2c1o_A IGK-C protein; FAB frag 99.7 2E-17 6.7E-22 174.6 13.2 163 296-458 43-245 (254)
105 3vh8_G Killer cell immunoglobu 99.7 9.2E-18 3.2E-22 183.3 10.7 157 301-469 33-216 (316)
106 4fom_A Poliovirus receptor-rel 99.7 2.2E-18 7.5E-23 186.9 5.6 164 297-472 120-304 (308)
107 1bih_A Hemolin; insect immunit 99.7 6.1E-18 2.1E-22 189.3 9.4 168 299-471 108-310 (395)
108 1e07_A Carcinoembryonic antige 99.7 6.7E-17 2.3E-21 193.9 18.0 155 294-468 470-640 (642)
109 3o4o_C Interleukin-1 receptor 99.7 3.4E-18 1.1E-22 188.1 5.2 166 300-467 129-334 (339)
110 2xzc_L FAB A.17 light chain; i 99.7 3.5E-17 1.2E-21 168.3 12.5 165 298-462 7-209 (216)
111 3s96_B 3B5H10 FAB light chain; 99.7 2.6E-17 8.7E-22 169.0 11.4 161 300-462 9-214 (218)
112 1wio_A CD4, T-cell surface gly 99.7 4.5E-17 1.6E-21 181.3 14.3 158 301-467 106-292 (363)
113 3pv7_A B7-H6, IG-like domain-c 99.7 6.1E-17 2.1E-21 170.2 14.5 169 297-466 9-224 (248)
114 3qs7_E FL cytokine receptor; i 99.7 7.6E-18 2.6E-22 193.2 8.1 163 301-471 149-326 (423)
115 1itb_B Type 1 interleukin-1 re 99.7 7E-18 2.4E-22 183.3 7.3 158 300-467 14-201 (315)
116 3tv3_L PGT128 light chain, IG 99.7 2.4E-17 8.4E-22 168.7 10.9 161 300-463 9-206 (211)
117 3dmk_A DOWN syndrome cell adhe 99.7 5.8E-17 2E-21 200.0 16.2 164 297-471 349-529 (816)
118 2wng_A Tyrosine-protein phosph 99.7 6.8E-17 2.3E-21 177.1 14.6 159 297-457 9-205 (327)
119 3v2a_R Vascular endothelial gr 99.7 1.1E-18 3.6E-23 213.3 0.0 163 301-472 559-760 (772)
120 2ocw_A Polymeric-immunoglobuli 99.7 1.5E-16 5E-21 188.4 18.4 168 297-470 337-548 (585)
121 1c1e_H Catalytic antibody 1E9 99.7 4.7E-17 1.6E-21 167.8 12.1 165 296-465 5-217 (219)
122 1e07_A Carcinoembryonic antige 99.7 7E-17 2.4E-21 193.7 15.4 184 264-472 358-561 (642)
123 1nfd_E H57 FAB; complex (immun 99.7 3E-18 1E-22 175.7 2.8 158 298-457 6-201 (212)
124 1sy6_A T-cell surface glycopro 99.7 1.3E-17 4.4E-22 171.7 7.5 144 303-466 15-202 (204)
125 1jbj_A CD3 epsilon and gamma e 99.7 3.4E-17 1.2E-21 165.7 10.3 131 301-458 9-179 (186)
126 1wio_A CD4, T-cell surface gly 99.7 4.6E-17 1.6E-21 181.3 12.1 153 301-471 4-181 (363)
127 2rcj_C Light chain; immunoglob 99.7 8E-17 2.7E-21 188.3 14.6 169 296-466 5-212 (523)
128 4fom_A Poliovirus receptor-rel 99.7 9.5E-17 3.2E-21 174.0 14.0 167 299-471 7-213 (308)
129 2ghw_B Anti-SARS SCFV antibody 99.7 1.6E-16 5.3E-21 167.0 15.1 168 295-467 6-241 (247)
130 3d9a_H Heavy chain of hyhel10 99.7 5.8E-17 2E-21 166.1 11.5 161 297-462 6-208 (210)
131 2p1y_A Bispecific alpha/beta T 99.7 1.6E-16 5.5E-21 165.7 14.9 155 297-455 6-222 (238)
132 3bkj_L WO2 IGG2A FAB fragment 99.7 7.2E-17 2.5E-21 170.6 12.2 162 297-458 40-241 (252)
133 3u83_A Poliovirus receptor-rel 99.7 3.4E-17 1.2E-21 178.9 10.0 162 297-471 138-323 (331)
134 3u83_A Poliovirus receptor-rel 99.7 4.3E-17 1.5E-21 178.1 10.5 171 296-471 19-233 (331)
135 1nkr_A P58-CL42 KIR; inhibitor 99.7 2.2E-16 7.4E-21 161.2 13.8 144 301-455 17-184 (201)
136 1mju_H Immunoglobulin MS6-12; 99.7 1.3E-16 4.4E-21 166.6 12.0 170 296-470 5-219 (227)
137 1dr9_A B7-1 (CD80), T lymphocy 99.7 4.1E-16 1.4E-20 158.3 15.3 160 300-464 3-197 (201)
138 3rjd_A High affinity immunoglo 99.7 1.9E-16 6.6E-21 166.5 13.3 140 296-458 87-249 (262)
139 3dmk_A DOWN syndrome cell adhe 99.7 3.7E-17 1.3E-21 201.7 8.8 204 294-507 529-750 (816)
140 1p6f_A NKP46, natural cytotoxi 99.7 2.6E-16 9E-21 166.7 14.1 157 302-472 17-195 (242)
141 3uzq_A Anti-dengue MAB 4E11; d 99.7 3E-16 1E-20 165.9 14.5 172 295-471 5-247 (253)
142 2wng_A Tyrosine-protein phosph 99.7 9.2E-17 3.1E-21 176.0 10.9 162 300-465 126-317 (327)
143 3bqu_C 3H6 FAB light chain; be 99.7 3.9E-17 1.3E-21 169.8 7.4 160 297-456 29-223 (233)
144 3eow_R Poliovirus receptor; im 99.7 1.2E-16 4.1E-21 164.9 10.8 165 298-467 6-211 (221)
145 4fqp_A Poliovirus receptor; im 99.7 1.4E-16 4.9E-21 173.3 11.9 171 295-469 4-216 (313)
146 2if7_A SLAM family member 6; N 99.7 4.2E-16 1.4E-20 158.6 14.6 146 298-463 5-187 (193)
147 3qs9_E FL cytokine receptor; i 99.7 5.4E-17 1.8E-21 191.4 9.2 162 301-471 149-326 (527)
148 3umt_A SCFV heavy chain and li 99.7 3.1E-16 1.1E-20 166.1 14.0 170 296-470 7-247 (256)
149 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 3E-16 1E-20 162.2 13.4 164 297-465 6-220 (222)
150 2o26_X MAST/stem cell growth f 99.7 1.3E-16 4.4E-21 171.4 10.9 152 297-468 18-183 (290)
151 1nqb_A Single-chain antibody f 99.7 6.4E-16 2.2E-20 164.4 16.0 169 296-469 5-234 (256)
152 1pz5_B Heavy chain of FAB (SYA 99.7 2E-16 6.8E-21 163.4 11.4 163 297-464 6-217 (220)
153 1qgc_4 Protein (immunoglobulin 99.7 1.4E-16 4.7E-21 181.3 11.2 168 297-464 7-213 (438)
154 3esu_F Antibody 14B7* light ch 99.7 6.2E-16 2.1E-20 162.7 15.3 154 297-453 10-231 (250)
155 2ocw_A Polymeric-immunoglobuli 99.7 7.5E-16 2.6E-20 182.3 17.3 174 295-470 4-223 (585)
156 2zg1_A Sialic acid-binding IG- 99.7 3.4E-16 1.2E-20 160.1 12.3 155 296-466 5-213 (214)
157 3ejj_X Macrophage colony-stimu 99.7 4.1E-16 1.4E-20 166.7 13.5 154 298-468 11-181 (289)
158 1f3r_B FV antibody fragment; I 99.7 2.8E-16 9.7E-21 166.8 11.8 169 297-470 6-247 (257)
159 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 9.9E-16 3.4E-20 162.5 15.8 167 297-468 9-248 (256)
160 2y23_A Myomesin; structural pr 99.6 1.1E-15 3.7E-20 165.1 15.9 159 300-464 10-198 (312)
161 2oz4_A Intercellular adhesion 99.6 2.4E-16 8.3E-21 167.5 10.2 140 298-468 105-264 (265)
162 3auv_A SC-DSFV derived from th 99.6 1.2E-15 4.2E-20 163.8 15.7 155 297-454 18-235 (276)
163 2j6e_L IGM, FAB light chain; a 99.6 1.2E-16 4.1E-21 166.1 7.2 164 298-462 26-229 (234)
164 2fbj_H IGA-kappa J539 FAB (hea 99.6 1.8E-15 6.1E-20 157.0 15.5 159 297-459 6-212 (220)
165 4dzb_B Vbeta2 (MAIT T cell rec 99.6 6.4E-16 2.2E-20 162.2 11.9 161 297-459 7-222 (246)
166 2znx_A SCFV; fluorotryptohpan, 99.6 1.8E-15 6.3E-20 159.1 15.4 155 297-454 7-222 (242)
167 3ux9_B SCFV antibody; five hel 99.6 2.4E-15 8.1E-20 159.0 15.6 155 297-455 8-236 (256)
168 1moe_A Anti-CEA MAB T84.66; an 99.6 3.1E-15 1.1E-19 156.1 16.2 154 297-453 7-219 (240)
169 1b6u_A KIR2DL3, P58 killer cel 99.6 7.4E-16 2.5E-20 164.9 11.2 160 301-471 16-204 (257)
170 3vh8_G Killer cell immunoglobu 99.6 5.5E-16 1.9E-20 169.1 10.2 157 302-469 129-314 (316)
171 3juy_B 3B3 single chain varian 99.6 2.4E-15 8.3E-20 159.2 14.8 157 295-456 10-244 (256)
172 1qgc_4 Protein (immunoglobulin 99.6 4.3E-16 1.5E-20 177.2 9.5 166 295-465 222-436 (438)
173 1z7z_I Intercellular adhesion 99.6 5E-16 1.7E-20 177.7 10.1 138 300-468 292-449 (450)
174 1hnf_A CD2; T lymphocyte adhes 99.6 2.5E-15 8.5E-20 152.3 13.6 150 298-465 6-178 (182)
175 3gkz_A Anti-methamphetamine si 99.6 1.3E-15 4.6E-20 161.1 12.1 170 296-470 13-251 (257)
176 2wqr_A IG epsilon chain C regi 99.6 2.1E-16 7.1E-21 173.4 6.0 159 298-457 120-309 (323)
177 4dkd_C Macrophage colony-stimu 99.6 5.6E-16 1.9E-20 165.9 9.0 154 297-468 10-181 (292)
178 1z7z_I Intercellular adhesion 99.6 1.6E-15 5.5E-20 173.5 13.4 163 297-471 92-285 (450)
179 1dee_B IGM RF 2A2; FAB-IBP com 99.6 3.8E-15 1.3E-19 154.7 14.6 163 297-462 6-221 (223)
180 1svz_A Immunoglobulin;, single 99.6 6.7E-15 2.3E-19 154.6 16.6 155 297-454 7-228 (247)
181 2vol_A Murine IGG FC; FC, zinc 99.6 3.2E-16 1.1E-20 161.0 5.9 152 303-456 15-196 (207)
182 1qok_A MFE-23 recombinant anti 99.6 5.6E-15 1.9E-19 159.3 15.8 169 294-468 29-268 (282)
183 1ccz_A Protein (CD58); LFA-3, 99.6 2E-15 6.8E-20 151.0 11.4 147 300-465 4-168 (171)
184 2rgs_A I, IG gamma-2B heavy ch 99.6 2.2E-16 7.5E-21 163.7 4.2 153 303-457 23-205 (218)
185 1za6_B IGG heavy chain; immuno 99.6 1.9E-15 6.6E-20 167.3 12.0 165 296-464 5-213 (344)
186 2oz4_A Intercellular adhesion 99.6 2.9E-15 9.9E-20 159.1 12.9 145 302-472 14-186 (265)
187 1op3_H FAB 2G12, heavy chain; 99.6 2.2E-15 7.7E-20 156.6 11.7 162 296-461 5-218 (225)
188 1dn0_B IGM-kappa cold agglutin 99.6 7.9E-15 2.7E-19 153.6 15.3 169 297-468 6-227 (232)
189 3q5y_A TCR N15 beta; IG, T cel 99.6 3.7E-15 1.3E-19 155.9 11.0 159 297-458 8-214 (240)
190 3m8o_H Immunoglobulin A1 heavy 99.6 1.5E-14 5E-19 149.6 15.3 159 297-458 6-213 (221)
191 2dru_A Chimera of CD48 antigen 99.6 9.8E-15 3.3E-19 147.3 13.1 147 299-464 7-177 (180)
192 3bae_H WO2 IGG2A FAB fragment 99.6 4.4E-15 1.5E-19 154.7 10.7 163 297-464 6-222 (228)
193 2gki_A Nuclease; anti-DNA anti 99.6 2.6E-14 8.8E-19 155.0 17.1 170 294-468 25-272 (291)
194 2gjj_A A21 single-chain antibo 99.6 2.5E-14 8.5E-19 152.9 16.5 155 297-454 11-239 (264)
195 3omz_A Human vdelta1 gamma del 99.6 4.8E-15 1.7E-19 157.2 10.7 155 297-454 8-231 (259)
196 3liz_H 4C3 monoclonal antibody 99.6 7.9E-15 2.7E-19 155.5 11.7 166 297-467 6-219 (253)
197 3v2a_R Vascular endothelial gr 99.6 2.5E-14 8.7E-19 174.5 17.5 173 298-472 133-330 (772)
198 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 3E-14 1E-18 152.1 16.0 155 297-454 21-254 (268)
199 2xqy_G A13-D6.3 monoclonal ant 99.6 1.4E-14 4.7E-19 155.1 13.3 164 296-464 11-221 (261)
200 2w59_A IGY FCU3-4; immunoglobu 99.6 2.7E-15 9.3E-20 157.1 6.9 160 298-457 20-217 (231)
201 4ei6_B Vbeta16 XV19 type II na 99.5 2.8E-14 9.7E-19 149.5 14.5 159 297-458 8-220 (245)
202 1gsm_A Madcam-1, mucosal addre 99.5 3.9E-14 1.3E-18 146.7 15.0 151 301-459 17-196 (210)
203 1c5d_H Monoclonal antibody aga 99.5 2.3E-14 7.8E-19 147.9 13.2 160 297-463 6-211 (215)
204 3nfj_J T cell receptor beta ch 99.5 1.4E-14 4.9E-19 151.9 11.3 161 297-459 7-221 (245)
205 3mjg_X Beta-type platelet-deri 99.5 5.1E-15 1.7E-19 158.6 7.9 185 299-508 8-218 (289)
206 3pl6_D MBP peptide / T-cell re 99.5 2.5E-14 8.6E-19 152.3 12.8 159 297-458 32-242 (268)
207 3fku_X Neutralizing antibody F 99.5 2.4E-14 8.4E-19 154.3 12.4 165 298-468 7-250 (280)
208 1l6x_A Immunoglobulin gamma-1 99.5 8.1E-15 2.8E-19 150.3 8.0 151 304-456 16-196 (207)
209 3nl4_H Antigen binding fragmen 99.5 2.2E-14 7.7E-19 147.5 11.1 164 296-466 4-212 (215)
210 3knb_A Titin; IG-like, titin, 99.5 4.4E-14 1.5E-18 128.6 11.4 95 369-468 5-99 (100)
211 1i1c_A IGG2A, IG gamma-2A chai 99.5 5E-15 1.7E-19 156.4 5.8 153 303-457 29-211 (239)
212 3o3u_N Maltose-binding peripla 99.5 3.7E-14 1.3E-18 168.0 13.4 157 299-457 374-566 (581)
213 2wbj_D OB TCR; transmembrane, 99.5 4.8E-14 1.6E-18 151.6 12.9 162 296-459 29-247 (279)
214 1igy_B IGG1 intact antibody MA 99.5 1.9E-14 6.4E-19 164.4 10.2 165 296-465 4-212 (434)
215 3qib_D 2B4 beta chain; IG doma 99.5 2.2E-14 7.4E-19 153.1 9.9 159 297-458 33-245 (270)
216 1y0f_A Collagen I alpha 1; nat 99.5 1.1E-13 3.6E-18 172.1 17.4 23 110-132 17-39 (1054)
217 1igt_B IGG2A intact antibody - 99.5 4.3E-14 1.5E-18 161.8 12.3 164 297-465 6-216 (444)
218 1igt_B IGG2A intact antibody - 99.5 1E-14 3.4E-19 167.0 6.9 152 303-456 252-433 (444)
219 3bn9_D E2 FAB heavy chain; ant 99.5 3.7E-14 1.3E-18 151.6 10.5 166 296-465 5-227 (257)
220 3knb_B Obscurin-like protein 1 99.5 5.1E-14 1.8E-18 129.9 10.0 96 368-470 12-107 (107)
221 1igy_B IGG1 intact antibody MA 99.5 1.1E-14 3.8E-19 166.3 6.7 153 303-457 242-424 (434)
222 2wqr_A IG epsilon chain C regi 99.5 1.5E-14 5.2E-19 158.5 7.0 156 307-464 25-210 (323)
223 1hzh_H IGG, immunoglobulin hea 99.5 9.1E-14 3.1E-18 159.8 13.9 166 297-466 6-227 (457)
224 1hxm_B Gamma-delta T-cell rece 99.5 1.1E-13 3.9E-18 145.4 13.4 165 297-466 7-227 (242)
225 3tv3_H PGT128 heavy chain, IG 99.5 8.4E-14 2.9E-18 146.4 11.2 168 296-467 5-236 (239)
226 1bec_A 14.3.D T cell antigen r 99.5 6.2E-14 2.1E-18 147.0 9.5 157 297-456 5-211 (238)
227 3qhz_H Human monoclonal antibo 99.5 1.1E-13 3.8E-18 144.3 11.3 167 297-467 6-228 (232)
228 3to4_D NKT vbeta2 (mouse varia 99.5 1.5E-13 5E-18 145.5 12.3 158 297-456 7-218 (253)
229 3mtr_A N-CAM-1, NCAM-1, neural 99.5 4.6E-14 1.6E-18 145.0 7.1 167 296-469 23-210 (215)
230 1iga_A IGA1; immunoglobulin; N 99.5 1.5E-13 5.2E-18 159.0 12.0 158 303-465 138-342 (475)
231 3n9g_H FAB fragment of MAB CR4 99.4 3.4E-13 1.2E-17 140.7 12.9 169 297-469 6-226 (230)
232 1oga_E TRBC1, T-cell receptor 99.4 4.1E-13 1.4E-17 142.1 13.3 160 297-459 9-220 (252)
233 1za6_B IGG heavy chain; immuno 99.4 1.1E-13 3.7E-18 153.2 8.8 153 302-457 131-330 (344)
234 1ow0_A IG alpha-1 chain C regi 99.4 2E-14 7E-19 148.4 2.3 157 298-456 11-199 (214)
235 2aty_A Complement receptor chi 99.4 3.8E-13 1.3E-17 151.6 12.7 152 303-456 180-361 (376)
236 1iga_A IGA1; immunoglobulin; N 99.4 4.7E-13 1.6E-17 154.9 13.8 154 302-457 258-443 (475)
237 3u2s_H PG9 heavy chain; greek 99.4 5.1E-13 1.8E-17 141.6 11.7 169 295-467 3-237 (248)
238 1hzh_H IGG, immunoglobulin hea 99.4 2E-13 7E-18 156.9 8.3 152 303-457 261-443 (457)
239 1ypz_F T-cell receptor gamma c 99.4 8.7E-13 3E-17 137.8 12.2 157 297-458 7-217 (230)
240 1g1c_A Immunoglobulin-like dom 99.4 2E-12 6.9E-17 115.9 11.9 94 369-468 5-98 (99)
241 3sob_H Antibody heavy chain, l 99.4 1.3E-12 4.3E-17 138.7 11.9 170 295-468 27-251 (256)
242 2cqv_A MLCK, myosin light chai 99.4 2.5E-12 8.4E-17 119.0 11.8 99 368-473 6-104 (114)
243 3mlr_H Human monoclonal anti-H 99.4 1.4E-12 4.8E-17 135.8 11.1 164 297-464 6-222 (226)
244 2kdg_A Myotilin; immonoglobuli 99.4 2E-12 6.7E-17 116.2 10.0 95 369-469 5-99 (100)
245 1zvo_C Myeloma immunoglobulin 99.4 5E-12 1.7E-16 148.2 16.2 169 299-467 305-504 (512)
246 1u2h_A APEG-1, aortic preferen 99.3 3.9E-12 1.3E-16 114.0 11.2 95 368-468 4-98 (99)
247 2dm3_A KIAA0992 protein, palla 99.3 1.3E-12 4.5E-17 119.6 8.1 99 368-472 8-106 (110)
248 3iu4_H CHP3 FAB heavy chain; a 99.3 1.5E-12 5.1E-17 139.4 8.5 166 297-466 6-222 (263)
249 2nzi_A Titin; IG-domain, FNIII 99.3 9.1E-13 3.1E-17 141.9 6.7 177 264-461 78-283 (305)
250 4acp_A IG gamma-1 chain C regi 99.3 7.9E-13 2.7E-17 139.9 5.8 152 303-456 36-217 (240)
251 1wit_A Twitchin 18TH IGSF modu 99.3 5.5E-12 1.9E-16 112.1 10.3 90 369-467 2-93 (93)
252 3qp3_A Titin; I-SET IG-like, s 99.3 7.9E-12 2.7E-16 113.0 11.3 94 369-469 8-101 (103)
253 2kkq_A Myotilin; unknown funct 99.3 9.4E-12 3.2E-16 116.0 12.0 100 368-472 14-113 (116)
254 3irg_A Titin; IG-like, titin, 99.3 8.8E-12 3E-16 111.4 11.4 95 369-468 5-99 (100)
255 2edj_A Roundabout homolog 2; K 99.3 7E-12 2.4E-16 112.8 10.3 93 368-469 7-99 (100)
256 2v5y_A Receptor-type tyrosine- 99.3 2E-11 6.9E-16 149.1 16.7 159 306-472 91-264 (731)
257 1fhg_A Telokin; immunoglobulin 99.3 1.3E-11 4.6E-16 120.7 11.3 99 368-472 40-138 (154)
258 3puc_A Titin; I-SET IG-like do 99.3 2.2E-11 7.5E-16 108.9 11.2 93 369-468 6-98 (99)
259 3irg_B Obscurin-like protein 1 99.3 1.4E-11 4.8E-16 112.0 10.0 96 368-470 12-107 (107)
260 2eo9_A Roundabout homolog 1; b 99.3 7.4E-12 2.5E-16 116.4 8.2 96 368-472 7-102 (118)
261 2dm2_A Palladin; beta-sandwich 99.3 6.3E-12 2.2E-16 115.3 7.6 100 368-472 7-106 (110)
262 1wwb_X Protein (brain derived 99.3 2.5E-11 8.5E-16 110.7 11.3 88 382-471 14-101 (103)
263 2dav_A SLOW MYBP-C, myosin-bin 99.2 2.2E-11 7.4E-16 115.7 10.8 99 370-468 8-111 (126)
264 3cx2_A Myosin-binding protein 99.2 4E-11 1.4E-15 109.9 11.9 99 369-467 4-107 (108)
265 3u1s_H FAB PGT145 heavy chain; 99.2 2.3E-11 7.8E-16 130.2 11.7 168 295-466 27-263 (267)
266 3kvq_A Vascular endothelial gr 99.2 1E-11 3.5E-16 113.1 6.9 96 368-472 9-104 (108)
267 1zvo_C Myeloma immunoglobulin 99.2 9.5E-11 3.3E-15 137.3 17.0 163 296-462 5-226 (512)
268 1ypz_E T cell receptor delta, 99.2 7.5E-11 2.6E-15 121.2 13.3 150 297-458 7-199 (207)
269 1he7_A High affinity nerve gro 99.2 5.8E-11 2E-15 112.7 11.4 91 382-472 13-103 (126)
270 2e7c_A Myosin-binding protein 99.2 4.4E-11 1.5E-15 111.3 10.1 94 369-470 21-117 (118)
271 1gxe_A Myosin binding protein 99.2 2.7E-11 9.3E-16 117.2 8.7 87 376-467 25-138 (139)
272 2yr3_A Myosin light chain kina 99.2 2.8E-11 9.5E-16 108.6 8.2 90 368-467 10-99 (99)
273 3caf_A Fibroblast growth facto 99.2 2.7E-11 9.1E-16 108.8 7.8 92 369-467 4-100 (100)
274 2jll_A NCAM2, neural cell adhe 99.2 9.4E-11 3.2E-15 130.7 13.9 187 264-467 79-287 (389)
275 2bk8_A Connectin, M1, titin he 99.2 1E-10 3.4E-15 104.6 10.9 92 371-469 3-95 (97)
276 2edn_A Myosin-binding protein 99.2 3.8E-11 1.3E-15 112.8 8.2 101 369-469 12-117 (118)
277 2ckn_A Basic fibroblast growth 99.2 4.4E-11 1.5E-15 106.9 8.2 87 369-467 9-95 (95)
278 1nct_A Titin; cell adhesion, g 99.2 1.7E-11 5.7E-16 112.3 5.5 93 368-467 13-105 (106)
279 2cry_A KIN of IRRE-like protei 99.2 1E-11 3.5E-16 116.3 3.5 103 368-472 13-117 (122)
280 2yuz_A Myosin-binding protein 99.1 3E-11 1E-15 109.7 6.1 93 368-471 6-98 (100)
281 3f8u_B Tapasin; endoplasmic re 99.1 1.4E-10 4.7E-15 130.5 11.7 168 297-464 164-400 (401)
282 2j8h_A Titin, connectin; cardi 99.1 2.5E-10 8.6E-15 114.4 12.4 100 368-472 3-102 (197)
283 1waa_A Titin; metal binding pr 99.1 1.7E-10 5.8E-15 103.4 9.2 89 368-468 4-92 (93)
284 3bfo_A Mucosa-associated lymph 99.1 2E-10 7E-15 101.5 9.6 84 369-468 3-87 (91)
285 2c5d_C AXL oncogene, tyrosine- 99.1 2.5E-10 8.6E-15 114.6 11.3 102 369-470 2-107 (195)
286 3m45_A Cell adhesion molecule 99.1 3.1E-10 1.1E-14 102.8 10.7 97 369-470 6-108 (108)
287 1x44_A Myosin-binding protein 99.1 2E-10 6.8E-15 104.1 9.3 93 370-472 8-100 (103)
288 3knb_A Titin; IG-like, titin, 99.1 5.3E-11 1.8E-15 108.1 4.3 71 297-367 11-84 (100)
289 2yd6_A PTPRD protein; hydrolas 99.1 2E-10 6.9E-15 117.3 9.1 97 368-470 5-102 (212)
290 2cr3_A Basic fibroblast growth 99.1 3.5E-10 1.2E-14 101.9 9.3 86 375-472 9-94 (99)
291 3lcy_A Titin; A-BAND, IG tande 99.1 3.8E-10 1.3E-14 112.6 10.4 99 368-473 6-104 (197)
292 2v9t_A Roundabout homolog 1; s 99.1 1.1E-10 3.7E-15 108.2 5.9 98 368-468 8-109 (117)
293 1wwc_A Protein (NT-3 growth fa 99.1 6.2E-10 2.1E-14 103.4 11.0 85 385-472 21-105 (118)
294 2yd1_A Tyrosine-protein phosph 99.1 4E-10 1.4E-14 115.0 10.6 99 368-471 5-105 (212)
295 3s35_X Vascular endothelial gr 99.1 8.5E-10 2.9E-14 102.8 11.9 94 376-472 15-114 (122)
296 3knb_B Obscurin-like protein 1 99.1 7.2E-11 2.5E-15 108.7 4.4 74 295-368 17-91 (107)
297 3so5_A LIG-3, leucine-rich rep 99.1 5.4E-10 1.9E-14 101.2 10.1 106 360-466 2-111 (112)
298 2edf_A Obscurin; beta-sandwich 99.0 2.7E-10 9.3E-15 102.9 7.8 93 368-472 7-99 (103)
299 1gl4_B Basement membrane-speci 99.0 6.3E-10 2.2E-14 99.5 10.1 86 370-467 10-97 (98)
300 2cr6_A KIAA1556 protein, obscu 99.0 4.2E-10 1.4E-14 104.3 9.1 94 369-472 13-106 (115)
301 2edk_A Myosin-binding protein 99.0 1.2E-10 4E-15 105.2 5.0 92 368-469 7-100 (101)
302 2lu7_A Obscurin-like protein 1 99.0 2.4E-10 8.2E-15 100.5 6.8 81 376-468 3-83 (84)
303 2a38_A Titin; Z1Z2, structural 99.0 2.7E-10 9.2E-15 113.8 8.0 95 369-468 5-99 (194)
304 3mtr_A N-CAM-1, NCAM-1, neural 99.0 7.1E-10 2.4E-14 113.5 11.3 99 368-472 18-116 (215)
305 1iam_A ICAM-1, CD54, intercell 99.0 4.7E-09 1.6E-13 106.3 17.0 143 297-456 5-166 (185)
306 2eo9_A Roundabout homolog 1; b 99.0 3.8E-10 1.3E-14 104.8 8.1 70 297-367 14-83 (118)
307 2yuv_A Myosin-binding protein 99.0 1.1E-09 3.7E-14 98.6 10.7 91 368-470 6-97 (100)
308 2lvc_A Obscurin-like protein 1 99.0 2.5E-10 8.7E-15 101.9 6.3 67 301-368 16-83 (91)
309 2e6p_A Obscurin-like protein 1 99.0 3.2E-10 1.1E-14 102.7 6.6 93 368-472 6-101 (104)
310 2dlt_A Myosin binding protein 99.0 3.6E-10 1.2E-14 102.9 6.9 91 368-468 7-97 (106)
311 1g1c_A Immunoglobulin-like dom 99.0 2.3E-10 7.9E-15 102.3 4.8 74 295-368 9-84 (99)
312 2lvc_A Obscurin-like protein 1 99.0 4.2E-10 1.4E-14 100.5 6.3 86 369-466 4-91 (91)
313 2edj_A Roundabout homolog 2; K 99.0 7.9E-10 2.7E-14 99.2 8.1 71 296-367 13-83 (100)
314 3qr2_A Basigin; CD147, EMMPRIN 99.0 1.8E-09 6.1E-14 103.0 11.0 89 368-458 20-116 (137)
315 1hxm_A Gamma-delta T-cell rece 99.0 3E-09 1E-13 111.4 13.7 150 297-457 7-199 (229)
316 4hwu_A Fibroblast growth facto 99.0 1.1E-09 3.9E-14 97.4 9.0 84 375-471 7-90 (95)
317 3rbg_A Cytotoxic and regulator 99.0 1.8E-09 6E-14 101.5 10.2 94 373-471 5-104 (124)
318 2lu7_A Obscurin-like protein 1 99.0 4.3E-10 1.5E-14 98.9 5.4 70 298-368 3-73 (84)
319 1epf_A NCAM, protein (neural c 99.0 1.6E-09 5.4E-14 108.0 10.2 98 369-471 2-102 (191)
320 2v5t_A NCAM2, N-CAM 2, neural 99.0 6.8E-10 2.3E-14 110.2 7.3 94 369-470 2-97 (189)
321 2eny_A Obscurin; beta-sandwich 99.0 6.8E-10 2.3E-14 101.3 6.7 94 368-472 7-101 (104)
322 1wit_A Twitchin 18TH IGSF modu 99.0 3.3E-10 1.1E-14 100.5 4.4 69 298-367 9-79 (93)
323 2kkq_A Myotilin; unknown funct 98.9 1.4E-09 4.7E-14 101.2 8.5 83 280-368 9-95 (116)
324 2kdg_A Myotilin; immonoglobuli 98.9 4.3E-10 1.5E-14 100.7 4.8 72 297-368 11-84 (100)
325 2k1m_A Myosin-binding protein 98.9 2.1E-09 7.1E-14 95.8 9.1 87 369-467 8-94 (95)
326 2ens_A Advanced glycosylation 98.9 5.2E-10 1.8E-14 99.9 5.1 84 368-467 9-94 (96)
327 1waa_A Titin; metal binding pr 98.9 1.1E-09 3.6E-14 98.1 7.1 72 295-367 9-81 (93)
328 3ojm_B Fibroblast growth facto 98.9 1.2E-09 4E-14 112.0 7.8 98 368-471 14-115 (231)
329 2c1o_A IGK-C protein; FAB frag 98.9 1.7E-09 5.7E-14 113.6 8.9 110 353-467 11-149 (254)
330 2edh_A Obscurin; structural ge 98.9 5.2E-09 1.8E-13 96.2 11.1 92 368-472 18-109 (113)
331 3shs_A HOC head outer capsid p 98.9 4.1E-09 1.4E-13 111.1 11.6 141 301-468 12-183 (304)
332 2cqv_A MLCK, myosin light chai 98.9 9.2E-10 3.1E-14 101.5 5.9 71 297-367 13-84 (114)
333 1mq8_A ICAM-1, intercellular a 98.9 1.9E-10 6.5E-15 125.1 1.4 160 301-472 96-286 (291)
334 2dm3_A KIAA0992 protein, palla 98.9 7E-10 2.4E-14 101.2 5.0 73 296-368 14-88 (110)
335 2dku_A KIAA1556 protein; beta- 98.9 2.2E-09 7.6E-14 96.9 8.1 93 368-472 7-99 (103)
336 2xot_A Amphoterin-induced prot 98.9 7.5E-10 2.6E-14 123.8 6.0 100 298-402 253-360 (361)
337 2wv3_A Neuroplastin; igcam, me 98.9 4.3E-09 1.5E-13 105.1 11.0 89 369-471 3-94 (190)
338 2yr3_A Myosin light chain kina 98.9 7.6E-10 2.6E-14 99.1 4.8 81 281-368 6-86 (99)
339 2cpc_A KIAA0657 protein; immun 98.9 3.8E-09 1.3E-13 96.9 9.6 92 369-472 10-104 (113)
340 2vr9_A Roundabout 1, ROBO; imm 98.9 1.4E-09 4.7E-14 111.0 6.8 98 368-468 8-106 (217)
341 1u2h_A APEG-1, aortic preferen 98.9 8.1E-10 2.8E-14 98.7 4.4 72 296-368 10-84 (99)
342 1mq8_A ICAM-1, intercellular a 98.9 7.2E-09 2.5E-13 112.6 12.7 157 298-471 6-189 (291)
343 1fhg_A Telokin; immunoglobulin 98.9 9.5E-10 3.2E-14 107.5 5.0 72 296-367 46-119 (154)
344 3cx2_A Myosin-binding protein 98.9 1.8E-09 6.1E-14 98.8 6.5 74 295-368 8-94 (108)
345 2dm2_A Palladin; beta-sandwich 98.9 2.4E-09 8.3E-14 97.8 7.1 71 297-367 14-87 (110)
346 2e7b_A Obscurin; IG-like domai 98.9 1.7E-09 5.8E-14 97.7 5.8 92 368-471 7-98 (103)
347 2yuz_A Myosin-binding protein 98.9 1.6E-09 5.5E-14 98.2 5.5 71 296-368 12-83 (100)
348 2v44_A NCAM2, neural cell adhe 98.9 9.2E-09 3.2E-13 102.3 11.6 94 371-471 4-98 (189)
349 2dm7_A KIAA1556 protein; beta- 98.9 5.4E-09 1.8E-13 95.2 9.0 92 368-472 7-98 (108)
350 1pd6_A Cardiac MYBP-C;, myosin 98.9 5E-09 1.7E-13 95.6 8.8 89 368-467 14-103 (104)
351 3irg_A Titin; IG-like, titin, 98.9 1E-09 3.5E-14 97.8 4.0 71 297-367 11-84 (100)
352 2v9r_A Roundabout homolog 1; p 98.9 1.1E-09 3.8E-14 110.7 4.7 101 368-471 8-112 (212)
353 2ckn_A Basic fibroblast growth 98.9 1.9E-09 6.4E-14 96.2 5.5 67 297-367 15-81 (95)
354 2e6q_A Obscurin-like protein 1 98.9 2.5E-08 8.4E-13 92.7 13.2 93 369-471 8-108 (112)
355 3zyj_A Leucine-rich repeat-con 98.9 4.3E-09 1.5E-13 120.6 9.9 103 357-472 333-437 (440)
356 3qp3_A Titin; I-SET IG-like, s 98.9 1.3E-09 4.6E-14 98.1 4.5 73 296-368 13-86 (103)
357 1nct_A Titin; cell adhesion, g 98.8 1.9E-09 6.5E-14 98.5 5.3 73 295-367 18-91 (106)
358 3puc_A Titin; I-SET IG-like do 98.8 1.7E-09 5.7E-14 96.5 4.8 73 295-368 10-84 (99)
359 1f97_A Junction adhesion molec 98.8 7.3E-09 2.5E-13 104.4 10.0 95 370-473 2-108 (212)
360 2e7c_A Myosin-binding protein 98.8 2.3E-09 8E-14 99.5 5.8 68 298-367 31-100 (118)
361 3kvq_A Vascular endothelial gr 98.8 3.5E-09 1.2E-13 96.1 6.8 70 297-367 16-85 (108)
362 1rhf_A Tyrosine-protein kinase 98.8 2.3E-09 8E-14 106.0 6.1 98 369-471 2-100 (182)
363 1x44_A Myosin-binding protein 98.8 4.6E-09 1.6E-13 95.0 7.3 70 297-367 13-85 (103)
364 3bn3_B ICAM-5, intercellular a 98.8 3.1E-08 1.1E-12 101.2 14.1 148 297-456 8-174 (196)
365 2eny_A Obscurin; beta-sandwich 98.8 5.2E-09 1.8E-13 95.4 7.3 72 296-367 13-86 (104)
366 1gxe_A Myosin binding protein 98.8 2E-09 6.7E-14 104.1 4.7 70 298-367 25-124 (139)
367 4fa8_A Secreted protein BARF1; 98.8 1.6E-09 5.6E-14 111.2 4.4 88 378-470 2-107 (203)
368 1z9m_A GAPA225; nectin-like, I 98.8 1.1E-08 3.9E-13 98.6 9.8 95 373-472 42-142 (145)
369 2iep_A Muscle-specific kinase 98.8 3.3E-09 1.1E-13 105.6 6.1 95 369-471 7-102 (192)
370 2ens_A Advanced glycosylation 98.8 4.4E-09 1.5E-13 93.8 5.8 63 297-367 16-78 (96)
371 3grw_A Fibroblast growth facto 98.8 5.2E-09 1.8E-13 108.3 7.2 98 368-471 10-111 (241)
372 3caf_A Fibroblast growth facto 98.8 2E-09 6.7E-14 96.5 3.4 70 299-368 16-87 (100)
373 2bk8_A Connectin, M1, titin he 98.8 6.8E-09 2.3E-13 92.5 6.9 71 297-368 7-80 (97)
374 2e6p_A Obscurin-like protein 1 98.8 4.3E-09 1.5E-13 95.2 5.6 67 301-368 20-87 (104)
375 2dlt_A Myosin binding protein 98.8 5.7E-09 1.9E-13 94.9 6.4 73 295-368 12-85 (106)
376 2edk_A Myosin-binding protein 98.8 4.8E-09 1.7E-13 94.5 5.8 72 295-367 12-88 (101)
377 3bfo_A Mucosa-associated lymph 98.8 5.4E-09 1.9E-13 92.2 5.8 64 297-368 9-72 (91)
378 2va4_A NCAM2, N-CAM 2, neural 98.8 1.6E-08 5.5E-13 100.4 9.6 93 369-470 2-96 (192)
379 3bp6_B Programmed cell death 1 98.8 1.1E-08 3.8E-13 103.2 8.5 96 372-470 5-105 (202)
380 2dav_A SLOW MYBP-C, myosin-bin 98.8 4.4E-09 1.5E-13 99.7 5.1 74 295-368 11-97 (126)
381 3zyi_A Leucine-rich repeat-con 98.8 4E-09 1.4E-13 121.3 5.8 106 353-472 340-447 (452)
382 3m45_A Cell adhesion molecule 98.8 9.8E-09 3.3E-13 92.7 7.0 73 295-367 10-92 (108)
383 2edf_A Obscurin; beta-sandwich 98.8 6.4E-09 2.2E-13 93.8 5.7 69 296-367 13-84 (103)
384 2ifg_A High affinity nerve gro 98.8 7.2E-10 2.5E-14 122.7 -0.8 106 357-471 136-252 (347)
385 3irg_B Obscurin-like protein 1 98.8 4.3E-09 1.5E-13 95.3 4.4 70 296-367 18-90 (107)
386 2cr6_A KIAA1556 protein, obscu 98.7 9.3E-09 3.2E-13 95.1 6.6 73 295-367 17-91 (115)
387 1ntl_A CRRY-IG; immunology, co 98.7 4E-08 1.4E-12 116.2 13.7 152 303-456 355-536 (551)
388 1pd6_A Cardiac MYBP-C;, myosin 98.7 1.5E-08 5.2E-13 92.4 7.8 69 297-367 21-93 (104)
389 2edn_A Myosin-binding protein 98.7 5.2E-09 1.8E-13 98.1 4.7 74 295-368 16-102 (118)
390 3qr2_A Basigin; CD147, EMMPRIN 98.7 8.1E-09 2.8E-13 98.4 5.9 75 293-367 23-111 (137)
391 1wwb_X Protein (brain derived 98.7 1.1E-08 3.7E-13 93.0 6.3 64 304-367 14-83 (103)
392 2k1m_A Myosin-binding protein 98.7 1.7E-08 5.9E-13 89.8 7.4 70 297-367 14-84 (95)
393 1vca_A VCAM-D1,2, human vascul 98.7 2.9E-08 9.9E-13 101.3 10.0 91 372-472 3-94 (202)
394 1nbq_A JAM, junctional adhesio 98.7 1.7E-08 5.7E-13 101.6 7.9 104 369-473 4-111 (209)
395 4f80_A Butyrophilin subfamily 98.7 5.2E-08 1.8E-12 100.3 11.5 94 376-471 11-122 (226)
396 1gl4_B Basement membrane-speci 98.7 8.9E-09 3E-13 92.0 5.0 68 297-368 16-84 (98)
397 2fbo_J V1V2;, variable region- 98.7 2.4E-08 8.2E-13 103.7 8.8 93 372-470 5-133 (250)
398 3s35_X Vascular endothelial gr 98.7 9.6E-09 3.3E-13 95.5 4.8 71 298-368 15-96 (122)
399 3p2t_A Leukocyte immunoglobuli 98.7 7E-09 2.4E-13 104.5 4.2 91 369-469 5-97 (196)
400 2xot_A Amphoterin-induced prot 98.7 2.3E-08 7.8E-13 111.7 8.7 85 375-469 252-338 (361)
401 2dm7_A KIAA1556 protein; beta- 98.7 2E-08 7E-13 91.3 6.8 66 298-367 15-83 (108)
402 2e7b_A Obscurin; IG-like domai 98.7 3.1E-08 1.1E-12 89.2 7.9 68 297-367 14-84 (103)
403 2d3v_A Leukocyte immunoglobuli 98.7 9.6E-09 3.3E-13 103.7 4.6 91 369-469 5-97 (196)
404 2yuv_A Myosin-binding protein 98.7 4.1E-08 1.4E-12 88.1 8.3 66 301-367 18-84 (100)
405 2cr3_A Basic fibroblast growth 98.7 6.7E-09 2.3E-13 93.4 2.6 65 299-367 11-75 (99)
406 2eo1_A OBSCN protein, cDNA FLJ 98.7 2.3E-08 8E-13 89.9 6.1 82 377-470 19-100 (102)
407 3k0w_A Mucosa-associated lymph 98.6 2.1E-08 7.1E-13 103.0 6.4 86 368-469 17-103 (218)
408 2gi7_A GPVI protein; IG-like d 98.6 1.9E-08 6.6E-13 100.6 5.9 82 368-468 7-90 (184)
409 3uto_A Twitchin; kinase, muscl 98.6 8.8E-08 3E-12 113.8 12.5 93 368-467 481-573 (573)
410 1uct_A Immunoglobulin alpha FC 98.6 3.6E-08 1.2E-12 102.0 8.1 94 368-469 8-103 (218)
411 1ugn_A LIR1, leukocyte immunog 98.6 9.8E-09 3.3E-13 103.6 3.6 92 368-469 4-98 (198)
412 2cry_A KIN of IRRE-like protei 98.6 4.7E-09 1.6E-13 98.0 1.1 82 280-367 8-98 (122)
413 1he7_A High affinity nerve gro 98.6 1.8E-08 6.3E-13 95.4 4.9 63 305-367 14-84 (126)
414 1hng_A CD2; T lymphocyte adhes 98.6 9.5E-08 3.3E-12 95.2 10.4 85 378-470 5-101 (176)
415 3r08_E T-cell surface glycopro 98.6 1.5E-08 5E-13 88.7 3.8 60 298-367 6-66 (82)
416 2v9t_A Roundabout homolog 1; s 98.6 1.9E-08 6.6E-13 92.8 4.7 71 297-367 15-93 (117)
417 2id5_A Lingo-1, leucine rich r 98.6 4.6E-08 1.6E-12 112.9 8.8 85 375-467 391-476 (477)
418 4hwu_A Fibroblast growth facto 98.6 2.3E-08 7.9E-13 88.8 4.9 67 297-368 7-73 (95)
419 3rbg_A Cytotoxic and regulator 98.6 2.9E-08 1E-12 93.1 5.8 71 298-368 8-88 (124)
420 1pko_A Myelin oligodendrocyte 98.6 2.7E-07 9.3E-12 88.0 12.6 96 373-470 10-123 (139)
421 2edh_A Obscurin; structural ge 98.6 7.4E-08 2.5E-12 88.4 8.2 68 296-367 24-94 (113)
422 2eo1_A OBSCN protein, cDNA FLJ 98.6 3.2E-08 1.1E-12 89.0 5.4 67 298-367 18-87 (102)
423 2cpc_A KIAA0657 protein; immun 98.6 4.9E-08 1.7E-12 89.4 6.6 65 301-367 23-89 (113)
424 3r4d_A CEA-related cell adhesi 98.6 6E-08 2E-12 97.8 7.5 90 374-471 4-111 (208)
425 3rbs_A Myomesin-1; immunoglobu 98.6 1.4E-07 4.8E-12 96.8 10.3 87 370-464 4-91 (207)
426 3so5_A LIG-3, leucine-rich rep 98.6 4.1E-08 1.4E-12 88.6 5.3 73 296-368 15-98 (112)
427 1wwc_A Protein (NT-3 growth fa 98.6 4.6E-08 1.6E-12 90.6 5.4 79 281-367 3-86 (118)
428 1eaj_A Coxsackie virus and ade 98.6 1.7E-07 5.8E-12 86.4 9.2 92 375-468 11-125 (126)
429 3udw_C Poliovirus receptor; PV 98.6 2.7E-07 9.2E-12 84.4 10.5 96 375-470 6-118 (118)
430 3c6l_A TCR 2W20 alpha chain; T 98.0 7.7E-09 2.6E-13 104.9 0.0 143 298-450 7-182 (185)
431 2e6q_A Obscurin-like protein 1 98.6 1.6E-07 5.6E-12 87.1 8.8 70 294-365 11-92 (112)
432 2v5y_A Receptor-type tyrosine- 98.5 2.9E-07 9.9E-12 112.3 13.6 158 297-468 170-354 (731)
433 2dku_A KIAA1556 protein; beta- 98.5 1.6E-07 5.4E-12 84.6 8.0 67 297-366 14-83 (103)
434 3jz7_A MCAR, CAR, coxsackievir 98.5 8.9E-08 3.1E-12 96.4 6.7 98 373-472 4-124 (214)
435 3khq_A B-cell antigen receptor 98.5 2.4E-07 8.3E-12 88.4 9.3 93 371-470 19-119 (133)
436 1fnl_A Low affinity immunoglob 98.5 1E-07 3.4E-12 94.3 6.5 81 368-467 6-87 (175)
437 1oll_A NK receptor; immune sys 98.5 7.3E-08 2.5E-12 96.6 5.5 90 369-468 4-95 (188)
438 3q0h_A T cell immunoreceptor w 98.5 5.1E-07 1.7E-11 84.0 10.8 90 375-472 9-112 (117)
439 3sgj_C Human FCG3A receptor; r 98.5 1.3E-07 4.3E-12 96.6 7.2 84 368-470 6-90 (204)
440 1xt5_A Variable region-contain 98.5 4.2E-07 1.4E-11 85.7 10.2 91 372-468 7-133 (135)
441 1z9m_A GAPA225; nectin-like, I 98.5 1.6E-07 5.6E-12 90.4 7.3 73 296-368 43-125 (145)
442 4f9l_D 20.1 anti-BTN3A1 antibo 98.5 1.3E-06 4.5E-11 91.3 14.5 152 298-452 8-230 (259)
443 2pet_A Lutheran blood group gl 98.5 7.1E-08 2.4E-12 98.8 4.8 92 375-472 6-118 (231)
444 3mj8_L Stimulatory hamster ant 98.5 3.7E-07 1.3E-11 92.6 10.0 92 371-468 3-109 (213)
445 3juy_B 3B3 single chain varian 98.5 4.1E-07 1.4E-11 95.6 10.7 98 369-469 6-134 (256)
446 2r15_A Myomesin-1; sarcomeric 98.5 5.9E-08 2E-12 98.0 4.0 79 382-467 15-94 (212)
447 1jhl_L IGG1-kappa D11.15 FV (l 98.5 6E-07 2E-11 81.8 10.4 79 372-455 4-94 (108)
448 4gos_A V-SET domain-containing 98.5 4.5E-07 1.5E-11 85.5 9.8 92 374-467 10-119 (125)
449 1xau_A B- and T-lymphocyte att 98.5 6.9E-07 2.3E-11 81.0 10.2 89 377-468 22-116 (122)
450 2qsq_A Carcinoembryonic antige 98.5 6.6E-07 2.3E-11 82.8 10.5 87 374-468 5-109 (111)
451 3qib_D 2B4 beta chain; IG doma 98.5 4.6E-07 1.6E-11 96.0 10.7 111 353-468 3-141 (270)
452 3nl4_L Antigen binding fragmen 98.5 5.1E-07 1.7E-11 91.5 10.4 94 370-468 2-110 (213)
453 1nkr_A P58-CL42 KIR; inhibitor 98.5 1.1E-07 3.8E-12 96.2 5.4 94 368-469 7-105 (201)
454 1gsm_A Madcam-1, mucosal addre 98.5 7.5E-07 2.6E-11 92.0 11.6 81 379-472 17-99 (210)
455 1jhl_L IGG1-kappa D11.15 FV (l 98.4 2.5E-07 8.4E-12 84.4 7.1 72 297-368 7-93 (108)
456 2ghw_B Anti-SARS SCFV antibody 98.4 3.3E-07 1.1E-11 95.5 9.0 91 376-469 9-120 (247)
457 3b5h_A Cervical EMMPRIN, HAB18 98.4 1.6E-07 5.5E-12 92.9 6.1 83 280-367 77-168 (184)
458 3gkz_A Anti-methamphetamine si 98.4 5.1E-07 1.7E-11 94.8 10.3 96 371-469 10-127 (257)
459 3omz_A Human vdelta1 gamma del 98.4 2.2E-07 7.6E-12 97.8 7.2 97 369-469 2-119 (259)
460 3sbw_C Programmed cell death 1 98.4 1.6E-07 5.5E-12 95.7 5.8 94 375-471 7-118 (222)
461 2eys_A NKT15; natural killer T 98.4 3.2E-07 1.1E-11 94.7 8.1 143 297-456 9-188 (210)
462 4f9p_D 103.2 anti-BTN3A1 antib 98.4 1.5E-06 5.2E-11 90.4 12.8 154 296-454 5-229 (254)
463 3s96_B 3B5H10 FAB light chain; 98.4 8.7E-07 3E-11 90.0 11.0 94 370-469 2-117 (218)
464 3d9a_L Light chain of hyhel10 98.4 7.3E-07 2.5E-11 90.4 10.2 92 372-468 4-108 (213)
465 3rrq_A Protein PD-1, programme 98.4 1.1E-06 3.7E-11 83.3 10.6 97 373-472 5-119 (129)
466 3s97_C Contactin-1; carbonic a 98.4 1.4E-07 4.9E-12 94.0 4.7 79 375-460 14-94 (201)
467 3umt_A SCFV heavy chain and li 98.4 5.1E-07 1.7E-11 94.9 9.1 90 376-468 9-121 (256)
468 2d9c_A Signal-regulatory prote 98.4 1.2E-06 4.2E-11 83.2 10.7 101 371-471 10-124 (136)
469 1i1r_A GP130, interleukin-6 re 98.4 2.2E-06 7.7E-11 92.5 14.1 158 297-459 10-186 (303)
470 4frw_A Poliovirus receptor-rel 98.4 9.1E-08 3.1E-12 96.1 2.9 94 375-468 5-116 (218)
471 1h5b_A Murine T cell receptor 98.4 1.2E-06 4E-11 80.6 10.2 82 372-456 4-95 (113)
472 2oyp_A Hepatitis A virus cellu 98.4 4E-07 1.4E-11 82.3 6.9 87 378-467 3-107 (109)
473 2or8_A Hepatitis A virus cellu 98.4 6.3E-07 2.1E-11 82.3 8.1 90 376-468 4-111 (116)
474 1moe_A Anti-CEA MAB T84.66; an 98.4 3.9E-07 1.3E-11 94.3 7.5 95 371-470 3-114 (240)
475 1zox_A CLM-1; IG-superfamily, 98.4 2.8E-06 9.6E-11 77.8 12.4 93 375-470 7-112 (113)
476 2ywz_A NEW antigen receptor va 98.4 1.8E-06 6.1E-11 79.3 11.1 80 371-453 2-87 (111)
477 2d9q_B Granulocyte colony-stim 98.4 2.4E-06 8.3E-11 92.8 14.0 107 299-406 8-123 (313)
478 4hwn_A FC receptor-like A; FCR 98.4 5.6E-07 1.9E-11 82.5 7.6 85 368-468 7-99 (108)
479 3pv7_A B7-H6, IG-like domain-c 98.4 2.5E-07 8.6E-12 96.4 5.8 97 375-471 9-121 (248)
480 2ny1_B T-cell surface glycopro 98.4 1.8E-07 6.3E-12 92.8 4.5 61 298-367 104-164 (184)
481 1neu_A Myelin P0 protein; stru 98.4 2E-06 6.8E-11 79.7 11.3 94 375-471 5-122 (124)
482 2if7_A SLAM family member 6; N 98.4 1.1E-06 3.8E-11 88.6 10.0 88 375-470 4-108 (193)
483 2rgs_A I, IG gamma-2B heavy ch 98.4 3.9E-07 1.3E-11 93.8 6.7 89 368-458 8-102 (218)
484 1sy6_A T-cell surface glycopro 98.4 2.5E-07 8.5E-12 94.5 5.1 63 303-367 125-188 (204)
485 3esu_F Antibody 14B7* light ch 98.4 5.6E-07 1.9E-11 93.9 8.0 94 370-468 5-111 (250)
486 1h5b_A Murine T cell receptor 98.3 5.5E-07 1.9E-11 82.8 6.9 71 297-368 7-93 (113)
487 3r06_A Anti-mouse CD3epsilon a 98.3 1.3E-06 4.4E-11 88.5 10.2 92 370-466 2-106 (213)
488 2p1y_A Bispecific alpha/beta T 98.3 6.6E-07 2.3E-11 92.5 8.2 93 372-469 3-115 (238)
489 2zg1_A Sialic acid-binding IG- 98.3 3.4E-06 1.1E-10 85.3 13.3 94 374-470 5-124 (214)
490 3mj6_A Junctional adhesion mol 98.3 1E-06 3.5E-11 92.6 9.7 95 370-467 6-121 (268)
491 2vsd_A CHIR AB1; immune system 98.3 6.7E-07 2.3E-11 81.5 7.0 75 369-455 5-79 (105)
492 1b6u_A KIR2DL3, P58 killer cel 98.3 6E-07 2E-11 95.6 7.7 105 301-409 116-242 (257)
493 1f2q_A High affinity immunoglo 98.3 2.4E-07 8.4E-12 91.4 4.3 80 369-467 4-84 (176)
494 1f3r_B FV antibody fragment; I 98.3 6.6E-07 2.2E-11 94.3 7.9 93 375-470 6-125 (257)
495 2q20_A VK1 O18/O8 germline lig 98.3 1.6E-06 5.4E-11 79.2 9.4 80 370-454 4-95 (109)
496 1lk3_L 9D7 light chain; antige 98.3 1.5E-06 5E-11 88.2 10.0 91 372-468 4-107 (210)
497 2x1w_L Vascular endothelial gr 98.3 1.9E-07 6.4E-12 95.5 3.4 84 375-468 13-101 (213)
498 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.3 1E-06 3.5E-11 92.8 9.0 96 370-468 4-116 (256)
499 3khq_A B-cell antigen receptor 98.3 6.3E-07 2.2E-11 85.5 6.6 72 295-368 21-99 (133)
500 4fmk_A Poliovirus receptor-rel 98.3 1.9E-06 6.4E-11 86.8 10.5 92 376-467 8-119 (225)
No 1
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.85 E-value=5.6e-21 Score=192.97 Aligned_cols=167 Identities=22% Similarity=0.268 Sum_probs=127.4
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcccee-ccCC--cEEEEeeeeecCceeEEeecC----
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA-VASS--TLNFTRINRINMGAYMCLADN---- 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~-~~~~--sL~I~~Vt~~DsG~YtC~A~N---- 367 (902)
+..+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+.......... ..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~ 87 (197)
T 2j8h_A 8 KEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGS 87 (197)
T ss_dssp EECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEE
T ss_pred EEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCc
Confidence 345567889999999999999999999999999876654332211111 2233 899999999999999999988
Q ss_pred ----------CCCEEEE-----cCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 368 ----------VPPQILI-----RNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 368 ----------~~P~i~~-----~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
.+|.+.. .+....+.+|+.+.|.|.+.+.|.|.+.|++++..+.... ++.+..... ..
T Consensus 88 ~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~--~~~~~~~~~-----~~ 160 (197)
T 2j8h_A 88 VSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNG--HYQVIVTRS-----FT 160 (197)
T ss_dssp EEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSS--SCEEEECSS-----EE
T ss_pred eeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCC--CEEEEEcCC-----ce
Confidence 1222211 1234567889999999999999999999999887765332 233222211 34
Q ss_pred EEEEec-cCCCCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 433 QLNISN-VNISDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 433 tL~I~~-V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
+|.|.+ ++.+|+|.|+|.|.|..|..+.++.|.|.+
T Consensus 161 ~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 161 SLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp EEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 699999 999999999999999999999999998863
No 2
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.85 E-value=5.4e-21 Score=191.25 Aligned_cols=164 Identities=21% Similarity=0.380 Sum_probs=125.8
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-------
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------- 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------- 367 (902)
+..+.+..+.+|++++|.|.+.+.|.+.+.|+|++..+......+.....+++|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 85 (189)
T 2v5t_A 6 REVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEID 85 (189)
T ss_dssp EECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEE
T ss_pred eccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceE
Confidence 3456678899999999999999999999999998877655444555556678999999999999999999987
Q ss_pred ---------CCCEEEEcCc--eeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEE
Q psy12803 368 ---------VPPQILIRNR--RVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 368 ---------~~P~i~~~p~--~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I 436 (902)
.+|.+..... ...+.+|+.+.|.|.+.+.|.|.+.|++++..+.... ++.+.. .. ++|.|
T Consensus 86 ~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~--~~~~~~-~~------~~L~i 156 (189)
T 2v5t_A 86 FRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE--KYILKG-SN------TELTV 156 (189)
T ss_dssp EEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSS--SEEEET-TT------TEEEE
T ss_pred EEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCC--cEEEec-CC------CEEEE
Confidence 2333333222 3456789999999999999999999999876654322 232221 12 24999
Q ss_pred eccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 437 SNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
.+++.+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 157 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 157 RNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 9999999999999999999999999988875
No 3
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.85 E-value=5.1e-21 Score=192.50 Aligned_cols=166 Identities=21% Similarity=0.271 Sum_probs=130.1
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcc-cee--ccCCcEEEEeeeeecCceeEEeecC----
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWK-DSA--VASSTLNFTRINRINMGAYMCLADN---- 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~-~~~--~~~~sL~I~~Vt~~DsG~YtC~A~N---- 367 (902)
+..+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+......+ ... ....+|.|.+++.+|+|.|+|.|.|
T Consensus 9 ~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~ 88 (194)
T 2a38_A 9 TQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQ 88 (194)
T ss_dssp EECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred EccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCce
Confidence 335567889999999999999999999999999877654332111 111 1234899999999999999999987
Q ss_pred -------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEE
Q psy12803 368 -------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQL 434 (902)
Q Consensus 368 -------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL 434 (902)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+.... ++.+..... .++|
T Consensus 89 ~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~--~~~~~~~~~-----~~~L 161 (194)
T 2a38_A 89 ATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSL--DFQISQEGD-----LYSL 161 (194)
T ss_dssp EEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSS--SEEEEEETT-----EEEE
T ss_pred EeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCC--cEEEEEcCC-----EEEE
Confidence 24555666667788999999999999999999999999887664332 333322221 2359
Q ss_pred EEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 435 NISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 435 ~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
.|.+++.+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 162 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 162 LIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 999999999999999999999999999999874
No 4
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.85 E-value=1.6e-21 Score=201.37 Aligned_cols=157 Identities=18% Similarity=0.196 Sum_probs=114.0
Q ss_pred cEEEEcCCeEEEEE---ecCCCCCCceEEecCCCccccc-----C----------Cccc---eeccCCcEEEEeeeeecC
Q psy12803 300 PIVVREGDNVRLRC---VATGHPKPSIIWKTSENKPITL-----G----------SWKD---SAVASSTLNFTRINRINM 358 (902)
Q Consensus 300 ~v~v~eGe~v~L~C---~a~G~P~p~v~W~k~~~~~~~~-----~----------~~~~---~~~~~~sL~I~~Vt~~Ds 358 (902)
++++.+|++|+|.| .+.+.|.+.|+|+|++...... . ..+. ......+|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 47899999999999 4678899999999976532110 0 0000 111234799999999999
Q ss_pred ceeEEeecC--------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecC--CceEEEee
Q psy12803 359 GAYMCLADN--------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHD--GVKYSISD 422 (902)
Q Consensus 359 G~YtC~A~N--------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~--~~~~~~~~ 422 (902)
|.|+|.|.| .+|.+...+..+.+.+|++++|.|.+.|.|.|.|+|+++++.+.... ..++.+
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~-- 159 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMK-- 159 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEE--
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEE--
Confidence 999999998 46666667777888999999999999999999999998877654322 222332
Q ss_pred cCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEE
Q psy12803 423 VDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGS 461 (902)
Q Consensus 423 ~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s 461 (902)
..++. ...|.|.+++.+|+|.|+|+|+|.+|+++..
T Consensus 160 ~~~g~---l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 160 EKDGS---LSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp CTTSC---EEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred eCCCC---EEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 23333 2347778999999999999999999998753
No 5
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.85 E-value=4.2e-21 Score=198.57 Aligned_cols=158 Identities=16% Similarity=0.188 Sum_probs=123.7
Q ss_pred cEEEEcCCeEEEEEecCC-CCCCceEEecCCCcccccCCccceecc-CC--cEEEEeeeeecCceeEEeecC--------
Q psy12803 300 PIVVREGDNVRLRCVATG-HPKPSIIWKTSENKPITLGSWKDSAVA-SS--TLNFTRINRINMGAYMCLADN-------- 367 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G-~P~p~v~W~k~~~~~~~~~~~~~~~~~-~~--sL~I~~Vt~~DsG~YtC~A~N-------- 367 (902)
++.+.+|+.+.|.|.+.+ .|.|.|+|+|++..+......+..... ++ +|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~a~~~~~ 90 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHST 90 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCCeEEEEE
Confidence 578999999999999975 799999999988766543333222222 12 699999999999999997766
Q ss_pred C-------------------------CCEEEEcCceeeeecCceEEEEEEeecc-CCceEEEEecCCeeeecCCceEEEe
Q psy12803 368 V-------------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PLSVRYWEFIDGTLIEHDGVKYSIS 421 (902)
Q Consensus 368 ~-------------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P~v~W~k~~~~l~~~~~~~~~~~ 421 (902)
. +|.|...+ ...+.+|+++.|.|.+.+. |.|.|.|++++..+.... ++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~--~~~-- 165 (207)
T 3rbs_A 91 VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE--KHD-- 165 (207)
T ss_dssp EEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCC--CCC--
T ss_pred EEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCC--ceE--
Confidence 0 46666554 4678999999999999999 999999999887775422 111
Q ss_pred ecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 422 DVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 422 ~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
... ...+|.|.+++.+|+|.|+|+|.|.+|.+++++.|.+.
T Consensus 166 -~~~----~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 166 -FKD----GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp -CSS----EEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred -cCC----CEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 111 13459999999999999999999999999999998754
No 6
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.84 E-value=2.2e-21 Score=230.42 Aligned_cols=196 Identities=21% Similarity=0.350 Sum_probs=145.7
Q ss_pred cccccccccCCCCCCCCcccccCCcccCCceeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec
Q psy12803 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV 343 (902)
Q Consensus 264 ~c~~kN~scs~~s~~~~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~ 343 (902)
.|.+.|..+.... ...+.+..+|.+... ......+.+|+.+.|.|.+.|.|.+.++|+|++..+......+....
T Consensus 269 ~C~a~N~~g~~~~-~~~l~V~~~p~~~~~----~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~ 343 (570)
T 3b43_A 269 TCYASNVAGKDSC-SAQLGVQEPPRFIKK----LEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFV 343 (570)
T ss_dssp EEEEEETTEEEEE-EEEECCBCCCEEEEC----CCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEE
T ss_pred EEEEECCCCcEEE-EEEEEeecCCccccc----CCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEE
Confidence 4555555544322 223444455544221 12234578999999999999999999999998776544333222222
Q ss_pred -cCCcEEEEeeeeecCceeEEeecC--------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCC
Q psy12803 344 -ASSTLNFTRINRINMGAYMCLADN--------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDG 408 (902)
Q Consensus 344 -~~~sL~I~~Vt~~DsG~YtC~A~N--------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~ 408 (902)
....|.|.+++.+|+|.|+|.|.| .+|.|...+..+.+.+|+++.|.|.+.|.|.|.|.|++++.
T Consensus 344 ~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~ 423 (570)
T 3b43_A 344 ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKR 423 (570)
T ss_dssp TTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTE
T ss_pred CCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCE
Confidence 235799999999999999999998 67888777888888999999999999999999999999887
Q ss_pred eeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 409 TLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 409 ~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.+.. +.++.+..... ..+|.|.+++.+|+|.|+|.|.|.+|.....+.|.|..+|.
T Consensus 424 ~l~~--~~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~ 479 (570)
T 3b43_A 424 ELRS--GKKYKIMSENF-----LTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPR 479 (570)
T ss_dssp ECCS--SSSEEEEEETT-----EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCE
T ss_pred ECcC--CCCEEEEEcCC-----EEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCc
Confidence 6643 23333322211 24599999999999999999999999999999999887654
No 7
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.84 E-value=2.3e-20 Score=188.09 Aligned_cols=164 Identities=20% Similarity=0.342 Sum_probs=128.8
Q ss_pred eecCCcEEEEc-CCeEEEEEecCCCCC--CceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC----
Q psy12803 295 IFSSSPIVVRE-GDNVRLRCVATGHPK--PSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN---- 367 (902)
Q Consensus 295 i~~~~~v~v~e-Ge~v~L~C~a~G~P~--p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N---- 367 (902)
+..+..+.+.+ |++++|.|.+.+.|. +.+.|+|++..+.... ....+..|.|.+++.+|+|.|+|.|.|
T Consensus 6 i~~~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~----~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~ 81 (190)
T 2wv3_A 6 IVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATR----KNASNMEYRINKPRAEDSGEYHCVYHFVSAP 81 (190)
T ss_dssp EEECCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCC----BCCSEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred ccccceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccc----eEeccEEEEEecCCcccCEEEEEEEEeCCcc
Confidence 33455567777 999999999998887 8999999776543221 112457899999999999999999976
Q ss_pred ---------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEec-CCeeee--cCCceEEEeecCCCceeeEeEEE
Q psy12803 368 ---------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFI-DGTLIE--HDGVKYSISDVDKGSYQYIMQLN 435 (902)
Q Consensus 368 ---------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~-~~~l~~--~~~~~~~~~~~~~~s~~~~stL~ 435 (902)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|+++ ++.... ....++.+..... .++|.
T Consensus 82 ~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~L~ 156 (190)
T 2wv3_A 82 KANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKEN-----YTELN 156 (190)
T ss_dssp EEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSS-----EEEEE
T ss_pred cccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCC-----eeEEE
Confidence 678888777788899999999999999999999999984 333322 1233444333221 24699
Q ss_pred EeccC-CCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 436 ISNVN-ISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 436 I~~V~-~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
|.+++ .+|+|.|+|.|.|..|....++.|.|.
T Consensus 157 i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 157 IVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp ECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 99999 799999999999999999999999885
No 8
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.84 E-value=5.2e-21 Score=192.16 Aligned_cols=163 Identities=22% Similarity=0.328 Sum_probs=127.1
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC---------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN--------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N--------- 367 (902)
.+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+..............+|.|.+++.+|+|.|+|.+.|
T Consensus 13 ~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 92 (192)
T 2iep_A 13 PLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESC 92 (192)
T ss_dssp CCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEE
T ss_pred CccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeE
Confidence 34567899999999999999999999999997765433222222223345799999999999999999988
Q ss_pred ------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCC
Q psy12803 368 ------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNI 441 (902)
Q Consensus 368 ------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~ 441 (902)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++... ..+ +|.|.+++.
T Consensus 93 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~--~~~~~~--~~~------~L~i~~~~~ 162 (192)
T 2iep_A 93 GALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALREN--SRIAVL--ESG------SLRIHNVQK 162 (192)
T ss_dssp EEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCC--SSEEEC--TTS------CEEESSCCG
T ss_pred EEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCC--CcEEEe--cCC------cEEEecCCh
Confidence 3555666666778899999999999999999999999987665432 233322 222 399999999
Q ss_pred CCCeEEEEEEEeCCcee-EEEEEEEeecC
Q psy12803 442 SDFDTYRCISKNEVDIA-KGSLILFESNA 469 (902)
Q Consensus 442 ~DsG~YtC~A~N~~G~~-~~s~~L~V~~~ 469 (902)
+|+|.|+|.|.|..|.. +..+.|.|..+
T Consensus 163 ~d~G~Y~C~a~n~~g~~~s~~~~l~V~~p 191 (192)
T 2iep_A 163 EDAGQYRCVAKNSLGTAYSKLVKLEVEVF 191 (192)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred hhCEEEEEEEEcCCCcEEEEEEEEEEEeC
Confidence 99999999999999988 45688888754
No 9
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.84 E-value=1.9e-20 Score=200.19 Aligned_cols=169 Identities=21% Similarity=0.359 Sum_probs=133.3
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec-cCCcEEEEeeeeecCceeEEeecC--------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV-ASSTLNFTRINRINMGAYMCLADN-------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~-~~~sL~I~~Vt~~DsG~YtC~A~N-------- 367 (902)
.+.++.+.+|++++|.|.+.+.|.+.++|+|++..+........... ...+|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~ 90 (284)
T 2rik_A 11 KPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCS 90 (284)
T ss_dssp CCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred cccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEE
Confidence 45678899999999999999999999999998766543332222222 346899999999999999999988
Q ss_pred ------CCCEEEEcC-ceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccC
Q psy12803 368 ------VPPQILIRN-RRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVN 440 (902)
Q Consensus 368 ------~~P~i~~~p-~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~ 440 (902)
.+|.+.... ....+.+|+.+.|.|.+.+.|.+.+.|++++..+......+... ... ...|.|.+++
T Consensus 91 ~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~--~~~-----~~~L~i~~~~ 163 (284)
T 2rik_A 91 AQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSF--VES-----VAVLEMYNLS 163 (284)
T ss_dssp EEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEE--ETT-----EEEEEECSCC
T ss_pred EEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEE--cCC-----EEEEEECCCC
Confidence 566665543 34568899999999999999999999999887665433322221 111 3469999999
Q ss_pred CCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 441 ISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 441 ~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
.+|+|.|+|.|.|..|....++.|.|..+|..
T Consensus 164 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 195 (284)
T 2rik_A 164 VEDSGDYTCEAHNAAGSASSSTSLKVKEPPVF 195 (284)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEECCCBC
T ss_pred cccCEEEEEEEEcCCCceeEEEEEEEecCCcc
Confidence 99999999999999999999999999877654
No 10
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.84 E-value=8.3e-21 Score=203.55 Aligned_cols=165 Identities=24% Similarity=0.426 Sum_probs=131.0
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC---------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN--------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N--------- 367 (902)
.+....+.+|+++.|.|.+.+.|.+.+.|+|++..+......+.....++.|.|.+++.+|+|.|+|.|.|
T Consensus 106 ~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 185 (291)
T 1qz1_A 106 APTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFK 185 (291)
T ss_dssp CCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEE
T ss_pred CCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeE
Confidence 45667899999999999999999999999998877654444455556678999999999999999999987
Q ss_pred -------CCCEEEEcC--ceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCC--ceEEEeecCCCceeeEeEEEE
Q psy12803 368 -------VPPQILIRN--RRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDG--VKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 368 -------~~P~i~~~p--~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~--~~~~~~~~~~~s~~~~stL~I 436 (902)
.+|.+.... ....+.+|+++.|.|.+.+.|.|.+.|++++..+..... .++.... . .++|.|
T Consensus 186 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~--~-----~~~L~i 258 (291)
T 1qz1_A 186 DIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSD--D-----SSELTI 258 (291)
T ss_dssp EEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECT--T-----SCEEEE
T ss_pred EEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcC--C-----CcEEEE
Confidence 234444332 245677899999999999999999999998876644321 2333221 1 135999
Q ss_pred eccCCCCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 437 SNVNISDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
.+++.+|+|.|+|.|.|..|..+.++.|.|.+
T Consensus 259 ~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 259 RNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 99999999999999999999999999999874
No 11
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.84 E-value=7.9e-21 Score=196.05 Aligned_cols=176 Identities=16% Similarity=0.185 Sum_probs=129.3
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcc--ceeccCCcEEEEeeeeecCceeEEeecC--------
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWK--DSAVASSTLNFTRINRINMGAYMCLADN-------- 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~--~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-------- 367 (902)
+..+.+.+|++++|.|.+.+.|.+.+.|+|++..+....... .......+|.|.+++.+|+|.|+|.|.|
T Consensus 26 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 105 (231)
T 3ojm_B 26 KRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHT 105 (231)
T ss_dssp CSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCccccc
Confidence 466889999999999999999999999999876654332221 2233456899999999999999999987
Q ss_pred ----------CCCEEEE-cCceeeeecCceEEEEEEeeccCCceEEEEe----cCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 368 ----------VPPQILI-RNRRVGVPIGRTATLECEVEAFPLSVRYWEF----IDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 368 ----------~~P~i~~-~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k----~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
.+|.+.. .+....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+.....................+
T Consensus 106 ~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (231)
T 3ojm_B 106 YHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAE 185 (231)
T ss_dssp EEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTT
T ss_pred EEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCcc
Confidence 1222222 2455778899999999999999999999998 554443322222222211111111234
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCCC
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPV 473 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~~ 473 (902)
+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|...+..+
T Consensus 186 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p 226 (231)
T 3ojm_B 186 VLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAP 226 (231)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC---
T ss_pred EEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCC
Confidence 69999999999999999999999999999999998876653
No 12
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.84 E-value=3e-20 Score=193.77 Aligned_cols=188 Identities=18% Similarity=0.240 Sum_probs=133.1
Q ss_pred cCCcccCCceeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCc--cceeccCCcEEEEeeeeecCceeE
Q psy12803 285 IPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSW--KDSAVASSTLNFTRINRINMGAYM 362 (902)
Q Consensus 285 vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~--~~~~~~~~sL~I~~Vt~~DsG~Yt 362 (902)
.+|.+..+. +..+..+.+.+|++++|.|.+.+.|.+.+.|+|++..+...... ........+|.|.+++.+|+|.|+
T Consensus 10 ~~P~~~~p~-~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 88 (241)
T 3grw_A 10 GAPYWTRPE-RMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYT 88 (241)
T ss_dssp -CCEESSGG-GGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred CCceeEcCC-CCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEE
Confidence 455554443 23456688999999999999999999999999987665433221 123344568999999999999999
Q ss_pred EeecC------------------CCCEEEE-cCceeeeecCceEEEEEEeeccCCceEEEEe----cCCeeeecCCceEE
Q psy12803 363 CLADN------------------VPPQILI-RNRRVGVPIGRTATLECEVEAFPLSVRYWEF----IDGTLIEHDGVKYS 419 (902)
Q Consensus 363 C~A~N------------------~~P~i~~-~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k----~~~~l~~~~~~~~~ 419 (902)
|.|.| .+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.........
T Consensus 89 C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 168 (241)
T 3grw_A 89 CVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVT 168 (241)
T ss_dssp EEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEE
T ss_pred EEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeee
Confidence 99987 1233332 3456678899999999999999999999998 55544332222221
Q ss_pred Ee-ecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCCC
Q psy12803 420 IS-DVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPV 473 (902)
Q Consensus 420 ~~-~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~~ 473 (902)
.. ..........++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..++.++
T Consensus 169 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 169 VLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAE 223 (241)
T ss_dssp EEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-------
T ss_pred eeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCC
Confidence 11 1111122345679999999999999999999999999999999998876653
No 13
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.84 E-value=4.2e-20 Score=185.50 Aligned_cols=160 Identities=21% Similarity=0.315 Sum_probs=121.8
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccC---CcEEEEeeeeecCceeEEeecC-----
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVAS---STLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~---~sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
..+.++.+.+|++++|.|.+.+.|. .+.|+|+++..+.... +.....+ .+|.|.+++.+|+|.|+|.+.|
T Consensus 7 ~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~ 84 (189)
T 2v44_A 7 ISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQ-RVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQT 84 (189)
T ss_dssp ESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCS-SEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCE
T ss_pred ecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCc-eEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCc
Confidence 3456688999999999999999887 8999995444433222 2222222 3899999999999999999998
Q ss_pred ----------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEe
Q psy12803 368 ----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 368 ----------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+......++.... .+ +|.|.
T Consensus 85 ~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~--~~------~L~i~ 156 (189)
T 2v44_A 85 QEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA--NN------NLQIL 156 (189)
T ss_dssp EEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECT--TS------CEEET
T ss_pred EEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEec--CC------cEEEE
Confidence 4556655566678899999999999999999999999998877654444444432 22 39999
Q ss_pred ccCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12803 438 NVNISDFDTYRCISKNEVDIAKGSLILF 465 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G~~~~s~~L~ 465 (902)
+++.+|+|.|+|.|.|..+.......+.
T Consensus 157 ~v~~~d~G~Y~C~a~n~~~~~~~~~~~~ 184 (189)
T 2v44_A 157 NINKSDEGIYRCEGRVEARGEIDFRDII 184 (189)
T ss_dssp TCCGGGCEEEEEEEEETTTTEEEEEEEE
T ss_pred EcCcccCeEEEEEEEccccCceeeeeEE
Confidence 9999999999999999997665444443
No 14
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.84 E-value=3e-20 Score=190.83 Aligned_cols=167 Identities=23% Similarity=0.366 Sum_probs=129.3
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCC-ccceeccC--CcEEEEeeee-ecCceeEEeecC---
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGS-WKDSAVAS--STLNFTRINR-INMGAYMCLADN--- 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~-~~~~~~~~--~sL~I~~Vt~-~DsG~YtC~A~N--- 367 (902)
+..+.++.+.+|++++|.|.+.+.|.+.|.|+|++..+..... .......+ .+|.|.+++. +|+|.|+|.|.|
T Consensus 10 ~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g 89 (212)
T 2yd1_A 10 IRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVG 89 (212)
T ss_dssp EECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSS
T ss_pred EcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCC
Confidence 3456778899999999999999999999999998765542221 11111223 4899999999 999999999988
Q ss_pred ------------C-------CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCce
Q psy12803 368 ------------V-------PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSY 428 (902)
Q Consensus 368 ------------~-------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~ 428 (902)
. .|.+...+....+.+|+.++|.|.+.+.|.|.+.|++++..+... ..++.+. .
T Consensus 90 ~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~---~--- 162 (212)
T 2yd1_A 90 DAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMS-NPRYSLK---D--- 162 (212)
T ss_dssp CEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTT-STTEEEE---T---
T ss_pred CeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccC-CCeEEcc---C---
Confidence 1 167777777778889999999999999999999999987766432 2233222 1
Q ss_pred eeEeEEEEeccCCCCCeEEEEEEEeCCceeEEE-EEEEeecCCC
Q psy12803 429 QYIMQLNISNVNISDFDTYRCISKNEVDIAKGS-LILFESNAKT 471 (902)
Q Consensus 429 ~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s-~~L~V~~~p~ 471 (902)
.+|.|.+++.+|+|.|+|.|.|..|...+. +.|.|.....
T Consensus 163 ---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~ 203 (212)
T 2yd1_A 163 ---GFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRV 203 (212)
T ss_dssp ---TEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred ---CeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEeccc
Confidence 249999999999999999999999999765 8898886543
No 15
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.84 E-value=3.5e-20 Score=186.16 Aligned_cols=163 Identities=18% Similarity=0.234 Sum_probs=126.6
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC-CCceEEecCCCcccccCCcccee----ccCCcEEEEeeeeecCceeEEeecC---
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP-KPSIIWKTSENKPITLGSWKDSA----VASSTLNFTRINRINMGAYMCLADN--- 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P-~p~v~W~k~~~~~~~~~~~~~~~----~~~~sL~I~~Vt~~DsG~YtC~A~N--- 367 (902)
..+.++.+.+|++++|.|.+.+.| .+.+.|+|.++..+.....+... ....+|.|.+++.+|+|.|+|.+.|
T Consensus 7 ~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 86 (191)
T 1epf_A 7 IVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDG 86 (191)
T ss_dssp EESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTT
T ss_pred ecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCC
Confidence 356678899999999999999976 88999999444433322222222 2346899999999999999999988
Q ss_pred ------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEE
Q psy12803 368 ------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLN 435 (902)
Q Consensus 368 ------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~ 435 (902)
.+|.+...+....+.+|+++.|.|.+.+.|.|.+.|++++..+......++.... ++. |.
T Consensus 87 ~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~~------L~ 158 (191)
T 1epf_A 87 TQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLS--NNY------LQ 158 (191)
T ss_dssp EEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECT--TSC------EE
T ss_pred cceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEec--CCe------EE
Confidence 5677777777788899999999999999999999999988776544444444332 222 99
Q ss_pred EeccCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12803 436 ISNVNISDFDTYRCISKNEVDIAKGSLILFE 466 (902)
Q Consensus 436 I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V 466 (902)
|.+++.+|+|.|+|.|.|..+.......+.|
T Consensus 159 i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 159 IRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp ETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred ECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 9999999999999999999976655555544
No 16
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.83 E-value=9.2e-21 Score=203.20 Aligned_cols=166 Identities=21% Similarity=0.384 Sum_probs=125.4
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC---------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN--------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N--------- 367 (902)
.+....+.+|+++.|.|.+.+.|.+.+.|++++..+......+.....+++|.|.+++.+|+|.|+|.|.|
T Consensus 104 ~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~ 183 (291)
T 2wim_A 104 VVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFR 183 (291)
T ss_dssp CCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEE
T ss_pred CCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEe
Confidence 34567899999999999999999999999998877654444455556677999999999999999999987
Q ss_pred -------CCCEEEEcCc--eeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEec
Q psy12803 368 -------VPPQILIRNR--RVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISN 438 (902)
Q Consensus 368 -------~~P~i~~~p~--~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~ 438 (902)
.+|.+..... ...+.+|+.+.|.|.+.+.|.|.+.|++++..+.... ++.+.. .. ++|.|.+
T Consensus 184 ~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~--~~~~~~-~~------~~L~i~~ 254 (291)
T 2wim_A 184 DIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE--KYILKG-SN------TELTVRN 254 (291)
T ss_dssp EEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTT--TEEECS-TT------CEEEEES
T ss_pred eEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCc--cEEEcC-Cc------cEEEEee
Confidence 2333322222 3456789999999999999999999999876654322 233221 11 3499999
Q ss_pred cCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 439 VNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 439 V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
++.+|+|.|+|.|.|..|..++++.|.|..++.
T Consensus 255 ~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 287 (291)
T 2wim_A 255 IINSDGGPYVCRATNKAGEDEKQAFLQVFVQHH 287 (291)
T ss_dssp CCSTTCEEEEEEEEETTEEEEEEEEEEC-----
T ss_pred CCcccCEEEEEEEEECCCceeeeEEEEEEEecc
Confidence 999999999999999999999999999987654
No 17
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.83 E-value=3.1e-20 Score=187.36 Aligned_cols=160 Identities=20% Similarity=0.326 Sum_probs=127.8
Q ss_pred cCCcEEEEcCCeEEEEEe-cCCCCC-CceEEecCCCcccccCC-ccceeccCCcEEEEeeeeecCceeEEeecC------
Q psy12803 297 SSSPIVVREGDNVRLRCV-ATGHPK-PSIIWKTSENKPITLGS-WKDSAVASSTLNFTRINRINMGAYMCLADN------ 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~-a~G~P~-p~v~W~k~~~~~~~~~~-~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------ 367 (902)
.+..+.+.+|+++.|.|. +.+.|. +.+.|+|++..+..... .......+++|.|.+++.+|+|.|+|.+.|
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEE
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcc
Confidence 345688999999999999 888898 99999998876643222 233444567899999999999999999987
Q ss_pred ------------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCcee
Q psy12803 368 ------------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQ 429 (902)
Q Consensus 368 ------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~ 429 (902)
.+|.+...+....+.+|+.++|.|.+.+.|.|.+.|++++..+.. ..++. ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~--~~~~~---~~~---- 164 (201)
T 3s97_C 94 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPS--TAEIS---TSG---- 164 (201)
T ss_dssp EECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCT--TCEEE---TTT----
T ss_pred hhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCC--ceeec---CCC----
Confidence 123444445567788999999999999999999999998875532 22221 112
Q ss_pred eEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 430 YIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 430 ~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
.+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 165 --~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 165 --AVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp --TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred --CEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 249999999999999999999999999999999886
No 18
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.83 E-value=4.7e-20 Score=190.25 Aligned_cols=172 Identities=13% Similarity=0.180 Sum_probs=123.0
Q ss_pred cCCcEEEEcC--CeEEEEEecCCCCCCceEEecC--CCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-----
Q psy12803 297 SSSPIVVREG--DNVRLRCVATGHPKPSIIWKTS--ENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 297 ~~~~v~v~eG--e~v~L~C~a~G~P~p~v~W~k~--~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
.+..+.+.+| ++|+|.|.+.+ |.+.++|+|. ++..+... ..........|.|.+++.+|+|.|+|.|.|
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~-~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~ 90 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDG-NRISWDSKKGFTIPSYMISYAGMVFCEAKINDESY 90 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCS-SSCEEETTTEEEEEGGGTTTCSEEEEEEC----CE
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCC-CcccccCCccEEEccCChhcCceEEEEEEECCeeE
Confidence 3456889999 99999999987 7799999885 45444333 233344567899999999999999999987
Q ss_pred ------------CCCEEEEcC-ceeeeecCceEEEEEEeeccCC--ceEEEEecCCeeeecCCceEEEeecCC--Cceee
Q psy12803 368 ------------VPPQILIRN-RRVGVPIGRTATLECEVEAFPL--SVRYWEFIDGTLIEHDGVKYSISDVDK--GSYQY 430 (902)
Q Consensus 368 ------------~~P~i~~~p-~~~~v~~G~~v~L~C~a~g~P~--P~v~W~k~~~~l~~~~~~~~~~~~~~~--~s~~~ 430 (902)
.+|.+...+ ..+.+.+|++++|.|.+.+.|. +.+.|++++..+.... .......... .....
T Consensus 91 ~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~-~~~~~~~~~~~~~~~~~ 169 (213)
T 2x1w_L 91 QSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKK-LVNRDLKTQSGSEMKKF 169 (213)
T ss_dssp ECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEE-EEEEEECCCSSCSCEEE
T ss_pred EEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEE-EeccccccccCccceee
Confidence 022233333 3347899999999999998664 4799998887542110 0000111101 01344
Q ss_pred EeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 431 IMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 431 ~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.+.+.
T Consensus 170 ~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 170 LSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPI 210 (213)
T ss_dssp EEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC---
T ss_pred eEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEecccc
Confidence 66899999999999999999999999999999999987654
No 19
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.83 E-value=1.5e-20 Score=223.19 Aligned_cols=192 Identities=18% Similarity=0.344 Sum_probs=146.9
Q ss_pred cccccccccCCCCCCCCcccccCCcccCCceeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec
Q psy12803 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV 343 (902)
Q Consensus 264 ~c~~kN~scs~~s~~~~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~ 343 (902)
.|.+.|..+..... ..+.+..+|.+.. .+.++.+.+|+++.|.|.+.|.|.|.|+|+|++..+...... ....
T Consensus 363 ~C~a~N~~g~~~~~-~~l~V~~~P~~~~-----~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~-~~~~ 435 (570)
T 3b43_A 363 TCEAHNAAGSASSS-TSLKVKEPPVFRK-----KPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKY-KIMS 435 (570)
T ss_dssp EEEEEBTTBCCEEE-EEECEECCCEECS-----CCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSE-EEEE
T ss_pred EEEEEeCCCEEEEE-EEEEecCCCeeec-----CCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCE-EEEE
Confidence 46666666554332 2444555665432 345678899999999999999999999999987655332221 1122
Q ss_pred cC--CcEEEEeeeeecCceeEEeecC--------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecC
Q psy12803 344 AS--STLNFTRINRINMGAYMCLADN--------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFID 407 (902)
Q Consensus 344 ~~--~sL~I~~Vt~~DsG~YtC~A~N--------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~ 407 (902)
.+ .+|.|.+++.+|+|.|+|.|.| .+|.|...+.++.+.+|+.+.|.|.+.|.|.|.|.|++++
T Consensus 436 ~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~ 515 (570)
T 3b43_A 436 ENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDK 515 (570)
T ss_dssp ETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETT
T ss_pred cCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCC
Confidence 22 4799999999999999999999 6888888888888999999999999999999999999987
Q ss_pred CeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 408 GTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 408 ~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
+.+.... .++.+..... .++|.|.+++.+|+|.|+|+|.|.+|.+++++.|.|.+
T Consensus 516 ~~~~~~~-~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~e 570 (570)
T 3b43_A 516 GEIVRES-DNIWISYSEN-----IATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVLE 570 (570)
T ss_dssp EECCCCT-TTEEECCCSS-----EEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCBC
T ss_pred eEeccCC-CeEEEEECCC-----EEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEeC
Confidence 6654432 2333322221 34699999999999999999999999999999998863
No 20
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.83 E-value=2.8e-20 Score=209.53 Aligned_cols=159 Identities=25% Similarity=0.486 Sum_probs=130.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC---------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN--------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N--------- 367 (902)
.+..+.+.+|+++.|.|.+.|.|.|.+.|+|+++..+... ......+++|.|.+++.+|+|.|+|.|.|
T Consensus 211 ~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 288 (384)
T 3kld_A 211 FPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARK--ARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKG 288 (384)
T ss_dssp CCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTT--CEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCcccccc--ceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEE
Confidence 3556788999999999999999999999999766544322 22334567899999999999999999998
Q ss_pred -----CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCC
Q psy12803 368 -----VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNIS 442 (902)
Q Consensus 368 -----~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~ 442 (902)
.+|.+...+.+..+.+|+++.|.|.+.|.|.|.|.|++++..+.... ++.+. . .+|.|.+++.+
T Consensus 289 ~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~--~~~~~---~------~~L~i~~v~~~ 357 (384)
T 3kld_A 289 QLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRD--RIQIE---Q------GTLNITIVNLS 357 (384)
T ss_dssp EEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBT--TEEEE---T------TEEEESSCCGG
T ss_pred EEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCc--cEEEe---C------CEEEEeecChh
Confidence 46677777777889999999999999999999999999887764332 22221 1 14999999999
Q ss_pred CCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 443 DFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 443 DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
|+|.|+|+|.|.+|...+++.|.|..
T Consensus 358 D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 358 DAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred hCEEEEEEEEeCCceEEeceEEEEec
Confidence 99999999999999999999999863
No 21
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.83 E-value=2.6e-20 Score=199.19 Aligned_cols=162 Identities=22% Similarity=0.390 Sum_probs=129.4
Q ss_pred CcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcccee-ccCCcEEEEeeeeecCceeEEeecC----------
Q psy12803 299 SPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA-VASSTLNFTRINRINMGAYMCLADN---------- 367 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~-~~~~sL~I~~Vt~~DsG~YtC~A~N---------- 367 (902)
....+.+|+++.|.|.+.+.|.+.+.|+|++..+.......... .....|.|.+++.+|+|.|+|.|.|
T Consensus 107 ~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 186 (284)
T 2rik_A 107 PSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTS 186 (284)
T ss_dssp SEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEE
Confidence 34678999999999999999999999999876654333222221 2335799999999999999999998
Q ss_pred ----CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCC
Q psy12803 368 ----VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISD 443 (902)
Q Consensus 368 ----~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~D 443 (902)
.+|.+...+....+.+|+++.|.|.+.+.|.|.+.|++++..+..... +.+.... ..++|.|.+++.+|
T Consensus 187 l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~--~~~~~~~-----~~~~L~i~~v~~~d 259 (284)
T 2rik_A 187 LKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKK--YKIMSEN-----FLTSIHILNVDSAD 259 (284)
T ss_dssp EEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTT--EEEEEET-----TEEEEEECSCCGGG
T ss_pred EEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCC--EEEEEcC-----CEEEEEEcCCCccc
Confidence 566666666677889999999999999999999999998877654332 2222221 13469999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEEEee
Q psy12803 444 FDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 444 sG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
+|.|+|.|.|..|..+.++.|.|.
T Consensus 260 ~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 260 IGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEEEEEEEeCCCceeEEEEEEEc
Confidence 999999999999999999999886
No 22
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.83 E-value=3.6e-20 Score=187.18 Aligned_cols=159 Identities=18% Similarity=0.210 Sum_probs=127.4
Q ss_pred eeecCCcEEEEcCCeEEEEEecC-CCCCCceEEecCCCcccccCC--ccceecc--------CCcEEEEeeeeecCceeE
Q psy12803 294 HIFSSSPIVVREGDNVRLRCVAT-GHPKPSIIWKTSENKPITLGS--WKDSAVA--------SSTLNFTRINRINMGAYM 362 (902)
Q Consensus 294 ~i~~~~~v~v~eGe~v~L~C~a~-G~P~p~v~W~k~~~~~~~~~~--~~~~~~~--------~~sL~I~~Vt~~DsG~Yt 362 (902)
++..+.++.+.+|++++|.|.+. +.|.+.+.|+|++..+..... .+..... .++|.|.+++.+|+|.|+
T Consensus 5 ~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 84 (195)
T 2c5d_C 5 FVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQ 84 (195)
T ss_dssp EEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEE
T ss_pred eccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEE
Confidence 34466788999999999999999 899999999997765543211 1122222 358999999999999999
Q ss_pred EeecC---------------CCCEEEEcCceeeeecCceEEEEEEeeccCCc-eEEEEecCCeeeecCCceEEEeecCCC
Q psy12803 363 CLADN---------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLS-VRYWEFIDGTLIEHDGVKYSISDVDKG 426 (902)
Q Consensus 363 C~A~N---------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~ 426 (902)
|.|.| .+|.+...+....+.+|+.+.|.|.+.+.|.| .+.|++++..+......
T Consensus 85 C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~---------- 154 (195)
T 2c5d_C 85 CLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH---------- 154 (195)
T ss_dssp EEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS----------
T ss_pred EEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc----------
Confidence 99987 56777777777889999999999999999999 99999988766432221
Q ss_pred ceeeEeEEEEeccCCCCCeEEEEEEEeCCceeE-EEEEEEe
Q psy12803 427 SYQYIMQLNISNVNISDFDTYRCISKNEVDIAK-GSLILFE 466 (902)
Q Consensus 427 s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~-~s~~L~V 466 (902)
....+|.|.+++ |+|.|+|.|.|..|... .++.|.|
T Consensus 155 --~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 155 --GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp --SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 112459999987 89999999999999986 7888888
No 23
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.82 E-value=3.8e-20 Score=190.29 Aligned_cols=168 Identities=21% Similarity=0.272 Sum_probs=125.9
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec---cCCcEEEEee-eeecCceeEEeecC----
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV---ASSTLNFTRI-NRINMGAYMCLADN---- 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~---~~~sL~I~~V-t~~DsG~YtC~A~N---- 367 (902)
..+.++.+.+|+++.|.|.+.+.|.+.|.|+|++..+... ....... ....|.|.++ +.+|+|.|+|.|.|
T Consensus 11 ~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~ 89 (212)
T 2yd6_A 11 RTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQ-RFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGE 89 (212)
T ss_dssp ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCT-TEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEE
T ss_pred eCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCC-ceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCc
Confidence 3566788999999999999999999999999987654322 2111111 2347999999 59999999999988
Q ss_pred ----------C-------CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecC-CceEEEeecCCCcee
Q psy12803 368 ----------V-------PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHD-GVKYSISDVDKGSYQ 429 (902)
Q Consensus 368 ----------~-------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~-~~~~~~~~~~~~s~~ 429 (902)
. .|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+.... ..++.......
T Consensus 90 ~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~---- 165 (212)
T 2yd6_A 90 ISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSES---- 165 (212)
T ss_dssp EEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETT----
T ss_pred EEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCC----
Confidence 1 2667777777788999999999999999999999999887665431 12232222111
Q ss_pred eEeEEEEeccCCCCCeEEEEEEEeCCceeE-EEEEEEeecC
Q psy12803 430 YIMQLNISNVNISDFDTYRCISKNEVDIAK-GSLILFESNA 469 (902)
Q Consensus 430 ~~stL~I~~V~~~DsG~YtC~A~N~~G~~~-~s~~L~V~~~ 469 (902)
.++|.|.+++.+|+|.|+|.|.|.+|... ..+.|.|...
T Consensus 166 -~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~ 205 (212)
T 2yd6_A 166 -IGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGT 205 (212)
T ss_dssp -EEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred -eEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEec
Confidence 35699999999999999999999999884 5566666544
No 24
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.82 E-value=5.8e-20 Score=183.35 Aligned_cols=155 Identities=19% Similarity=0.314 Sum_probs=122.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceecc---CCcEEEEeeeeecCceeEEeecC------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVA---SSTLNFTRINRINMGAYMCLADN------ 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~---~~sL~I~~Vt~~DsG~YtC~A~N------ 367 (902)
.+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+............ .++|.|.+++.+|+|.|+|.+.|
T Consensus 8 ~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 87 (182)
T 1rhf_A 8 APVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEI 87 (182)
T ss_dssp CCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEE
T ss_pred CCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEE
Confidence 455688999999999999999999999999977654332221111111 25899999999999999999988
Q ss_pred ---------CCCEEEEcCceeeeecCceEEEEEEeeccCCc-eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEe
Q psy12803 368 ---------VPPQILIRNRRVGVPIGRTATLECEVEAFPLS-VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 368 ---------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
.+|.+...+....+.+|+.+.|.|.+.+.|.| .+.|++++..+..... ..++|.|.
T Consensus 88 ~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~--------------~~~~L~i~ 153 (182)
T 1rhf_A 88 SQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP--------------SPSVLNVT 153 (182)
T ss_dssp CCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE--------------SSEEEEEC
T ss_pred EEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC--------------CceEEEEe
Confidence 57777777777889999999999999999999 9999998766532110 12359999
Q ss_pred ccCCCCCeEEEEEEEeCCceeE-EEEEEEee
Q psy12803 438 NVNISDFDTYRCISKNEVDIAK-GSLILFES 467 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G~~~-~s~~L~V~ 467 (902)
++ +|+|.|+|.|.|..|... .++.|.|+
T Consensus 154 ~~--~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 154 GV--TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp CC--SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred cc--ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 88 599999999999999885 47777763
No 25
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.82 E-value=4.8e-20 Score=185.33 Aligned_cols=164 Identities=19% Similarity=0.275 Sum_probs=125.4
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCC---cEEEEeeeeecCceeEEeecC-----
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASS---TLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~---sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
..+.++.+.+|+++.|.|.+.+.|.+.+.|+|++..+..... .....++ +|.|.+++.+|+|.|+|.|.|
T Consensus 12 ~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~--~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~ 89 (197)
T 3lcy_A 12 KEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRK--YKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEV 89 (197)
T ss_dssp ECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSS--EEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEE
T ss_pred ccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCcc--EEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCce
Confidence 355678999999999999999999999999998766543222 2222222 799999999999999999998
Q ss_pred ---------CCCEEEEc---CceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEE
Q psy12803 368 ---------VPPQILIR---NRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLN 435 (902)
Q Consensus 368 ---------~~P~i~~~---p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~ 435 (902)
.+|.+... +....+.+|+.+.|.|.+.+.|.|.+.|++++..+... .++.+..... .++|.
T Consensus 90 ~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~--~~~~~~~~~~-----~~~L~ 162 (197)
T 3lcy_A 90 ETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNS--ENITIENTEH-----YTHLV 162 (197)
T ss_dssp EEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEEEEECSS-----EEEEE
T ss_pred eEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCC--CceEEEEcCC-----EEEEE
Confidence 12222211 23456788999999999999999999999887666432 2333322221 24699
Q ss_pred EeccCC-CCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 436 ISNVNI-SDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 436 I~~V~~-~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
|.++.. +|+|.|+|.|.|..|..+.++.|.|.+
T Consensus 163 i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 163 MKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp ESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 999995 899999999999999999999999875
No 26
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.82 E-value=4.7e-20 Score=207.19 Aligned_cols=195 Identities=25% Similarity=0.381 Sum_probs=147.6
Q ss_pred cccccccccCCCCCCCCcccccCCcccCCc-eeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcccee
Q psy12803 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSE-HIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA 342 (902)
Q Consensus 264 ~c~~kN~scs~~s~~~~~~v~vpP~i~~~~-~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~ 342 (902)
.|.+.|..+........+.+...|.+.... .+..+..+.+.+|++++|.|.+.+.|.+.+.|+|++..+. ........
T Consensus 193 ~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~-~~~~~~~~ 271 (403)
T 3laf_A 193 RCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQ-LRSKKYSL 271 (403)
T ss_dssp EEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECC-CSSSSEEE
T ss_pred EEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeecc-CCCceEEE
Confidence 455555443333333344444455433222 2335667889999999999999999999999999765543 23334445
Q ss_pred ccCCcEEEEeeeeecCceeEEeecC--------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCC
Q psy12803 343 VASSTLNFTRINRINMGAYMCLADN--------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDG 408 (902)
Q Consensus 343 ~~~~sL~I~~Vt~~DsG~YtC~A~N--------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~ 408 (902)
..+++|.|.+++.+|+|.|+|.|.| .+|.+...+....+.+|+.++|.|.+.+.|.|.+.|++++.
T Consensus 272 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~ 351 (403)
T 3laf_A 272 LGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGD 351 (403)
T ss_dssp ETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTE
T ss_pred CCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCE
Confidence 5667899999999999999999988 56777777778888999999999999999999999999887
Q ss_pred eeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecC
Q psy12803 409 TLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 409 ~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~ 469 (902)
.+..... +.+. .. ++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 352 ~~~~~~~--~~~~--~~------~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P 402 (403)
T 3laf_A 352 VVIPSDY--FQIV--GG------SNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKP 402 (403)
T ss_dssp ECCCSSS--EEEE--TT------TEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred ECCCCCc--EEEe--cC------ccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCC
Confidence 6644322 2222 11 24999999999999999999999999999999999865
No 27
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.82 E-value=8.4e-20 Score=183.01 Aligned_cols=162 Identities=20% Similarity=0.306 Sum_probs=121.8
Q ss_pred CcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-----------
Q psy12803 299 SPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----------- 367 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N----------- 367 (902)
.++.+.+|++++|.|.+.+.|.+.+.|+|++..+... ........+.+|.|.+++.+|+|.|+|.+.|
T Consensus 12 ~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 90 (192)
T 2va4_A 12 FNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN-EKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFL 90 (192)
T ss_dssp EEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCS-SSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCC-ccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccceEEEE
Confidence 3577889999999999999999999999977654332 2222233456899999999999999999987
Q ss_pred ---CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecC-----CceEEEeecCCCceeeEeEEEEecc
Q psy12803 368 ---VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHD-----GVKYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 368 ---~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~-----~~~~~~~~~~~~s~~~~stL~I~~V 439 (902)
.+|.+... ....+.+|+.+.|.|.+.+.|.+.+.|++++....... ..++.+.... ..++|.|.++
T Consensus 91 ~V~~~p~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~~ 164 (192)
T 2va4_A 91 QVFVQPHIIQL-KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH-----GSSSLHIKDV 164 (192)
T ss_dssp EEEEEEEEEEE-CCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEET-----TEEEEEEESC
T ss_pred EEEccCccccc-CcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeecc-----CceEEEEecC
Confidence 23333332 23457789999999999999999999998843222211 1222222111 1356999999
Q ss_pred CCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 440 NISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
+.+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 165 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 165 KLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 9999999999999999999999998874
No 28
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.81 E-value=6e-20 Score=196.82 Aligned_cols=167 Identities=18% Similarity=0.258 Sum_probs=128.3
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC-CCceEEecCCCcccccCCccceec----cCCcEEEEeeeeecCceeEEeecC---
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP-KPSIIWKTSENKPITLGSWKDSAV----ASSTLNFTRINRINMGAYMCLADN--- 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P-~p~v~W~k~~~~~~~~~~~~~~~~----~~~sL~I~~Vt~~DsG~YtC~A~N--- 367 (902)
..+.++.+.+|++++|.|.+.+.| .+.+.|+|.++..+.....+.... ...+|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g 86 (291)
T 1qz1_A 7 IVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDG 86 (291)
T ss_dssp EESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred ecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCC
Confidence 356678899999999999999976 689999994444433322222221 345899999999999999999988
Q ss_pred ------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEE
Q psy12803 368 ------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLN 435 (902)
Q Consensus 368 ------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~ 435 (902)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+......++.... .+. |.
T Consensus 87 ~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~~------L~ 158 (291)
T 1qz1_A 87 TQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLS--NNY------LQ 158 (291)
T ss_dssp CEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECT--TSC------EE
T ss_pred CeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEcc--CCc------EE
Confidence 4666677777788999999999999999999999999988776544444443322 222 99
Q ss_pred EeccCCCCCeEEEEEEEeCCcee--EEEEEEEeecCC
Q psy12803 436 ISNVNISDFDTYRCISKNEVDIA--KGSLILFESNAK 470 (902)
Q Consensus 436 I~~V~~~DsG~YtC~A~N~~G~~--~~s~~L~V~~~p 470 (902)
|.+++.+|+|.|+|.|.|..+.. ...+.|.|..+|
T Consensus 159 i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p 195 (291)
T 1qz1_A 159 IRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPP 195 (291)
T ss_dssp ETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEE
T ss_pred EccCccccCeEEEEEEEecCCCceeeEEEEEEEecCC
Confidence 99999999999999999976433 456667766544
No 29
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.81 E-value=2e-19 Score=201.34 Aligned_cols=172 Identities=21% Similarity=0.306 Sum_probs=131.9
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecC--CCcccccC---Cccceec---cCCcEEEEeeeeecCceeEEeec
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTS--ENKPITLG---SWKDSAV---ASSTLNFTRINRINMGAYMCLAD 366 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~--~~~~~~~~---~~~~~~~---~~~sL~I~~Vt~~DsG~YtC~A~ 366 (902)
+..+.+..+.+|++++|.|.+.|.|.+.|+|+|+ +..+.... ..+.... ..++|.|.+++.+|+|.|+|.|.
T Consensus 4 i~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (389)
T 2jll_A 4 IIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAA 83 (389)
T ss_dssp EEECCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEE
T ss_pred EEecCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEE
Confidence 3446678899999999999999999999999998 33322110 1122222 34589999999999999999999
Q ss_pred C--------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 367 N--------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 367 N--------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
| .+|.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+......++.+..... .+
T Consensus 84 n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~-----~~ 158 (389)
T 2jll_A 84 SRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGR-----KM 158 (389)
T ss_dssp CSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSS-----CE
T ss_pred eCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCC-----EE
Confidence 9 3555555555556789999999999999999999999988776544433444433222 24
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
+|.|.+++.+|+|.|+|.|.|..|....++.|.|...|.
T Consensus 159 ~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~ 197 (389)
T 2jll_A 159 ILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPS 197 (389)
T ss_dssp EEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCC
T ss_pred EEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCC
Confidence 699999999999999999999999999988888865543
No 30
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.81 E-value=1.9e-19 Score=183.59 Aligned_cols=160 Identities=14% Similarity=0.130 Sum_probs=121.4
Q ss_pred EEcCCeEEEEEecCC-CCCCceEEecCCCcccccCCccceecc-CCcEEEEeeeeecCceeEEeecCC------------
Q psy12803 303 VREGDNVRLRCVATG-HPKPSIIWKTSENKPITLGSWKDSAVA-SSTLNFTRINRINMGAYMCLADNV------------ 368 (902)
Q Consensus 303 v~eGe~v~L~C~a~G-~P~p~v~W~k~~~~~~~~~~~~~~~~~-~~sL~I~~Vt~~DsG~YtC~A~N~------------ 368 (902)
.-+++.+.|.|.+.+ .|.+.+.|+|++..+............ ..+|.|.+++.+|+|.|+|.|.|.
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v 93 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSG 93 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECH
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEE
Confidence 347889999999998 468999999987665433222211211 135999999999999999999981
Q ss_pred ----------------------CCEEEE-cCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCC
Q psy12803 369 ----------------------PPQILI-RNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDK 425 (902)
Q Consensus 369 ----------------------~P~i~~-~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~ 425 (902)
.|.+.. .+..+.+.+|+.+.|.|.+.+.|.|.+.|++++..+..... +.+.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~--~~~~~~~~ 171 (212)
T 2r15_A 94 QAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDH--CNLKFEAG 171 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSS--EEEEEETT
T ss_pred eeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCC--EEEEEcCC
Confidence 233333 34567889999999999999999999999998877654333 33322211
Q ss_pred CceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 426 GSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 426 ~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
. .++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 172 ~----~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 172 R----TAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp T----EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred C----EEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEc
Confidence 1 24699999999999999999999999999999998874
No 31
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.81 E-value=8.7e-20 Score=197.83 Aligned_cols=163 Identities=19% Similarity=0.310 Sum_probs=123.6
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCC-ccceeccCCcEEEEeeeeecCceeEEeecC-------
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGS-WKDSAVASSTLNFTRINRINMGAYMCLADN------- 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~-~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------- 367 (902)
..+....+.+|+++.|.|.+.+.|.+.+.|+|++..+..... .+.....++.|.|.+++.+|+|.|+|.|.|
T Consensus 113 ~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 192 (304)
T 2yd9_A 113 MGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYS 192 (304)
T ss_dssp ECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEEC
T ss_pred cCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEe
Confidence 345667899999999999999999999999998766543322 223345567999999999999999999998
Q ss_pred -----------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEE
Q psy12803 368 -----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 368 -----------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I 436 (902)
.+|.+...+....+.+|++++|.|.+.+.|.|.+.|++++..+...... . ....+|.|
T Consensus 193 ~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~-------~----~~~~~L~i 261 (304)
T 2yd9_A 193 SPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDM-------P----VGRNVLEL 261 (304)
T ss_dssp CCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSC-------C----BSEEEEEE
T ss_pred ccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcccc-------c----CCcEEEEE
Confidence 2345555566667889999999999999999999999987665432211 0 11234777
Q ss_pred eccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 437 SNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.++ +|+|.|+|.|.|..|..+.++.|.|...+.
T Consensus 262 ~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 294 (304)
T 2yd9_A 262 TDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPK 294 (304)
T ss_dssp CSC--CSCEEEEEEEEETTEEEEEEEEEC------
T ss_pred ccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCcc
Confidence 666 699999999999999999999999987654
No 32
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.81 E-value=1.2e-19 Score=203.56 Aligned_cols=158 Identities=20% Similarity=0.329 Sum_probs=129.0
Q ss_pred cEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC------------
Q psy12803 300 PIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------------ 367 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------------ 367 (902)
...+.+|+++.|.|.+.+.|.+.+.|+|++..+.... ......+++|.|.+++.+|+|.|+|.|.|
T Consensus 231 ~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~--~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 308 (404)
T 3p3y_A 231 SQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDK--AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVR 308 (404)
T ss_dssp EEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTT--EEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred CceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCc--ccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEE
Confidence 4678999999999999999999999999876653222 23334467899999999999999999998
Q ss_pred --CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCC-ceEEEeecCCCceeeEeEEEEeccCCCCC
Q psy12803 368 --VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDG-VKYSISDVDKGSYQYIMQLNISNVNISDF 444 (902)
Q Consensus 368 --~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~-~~~~~~~~~~~s~~~~stL~I~~V~~~Ds 444 (902)
.+|.+...+....+.+|+.++|.|.+.+.|.|.+.|++++..+..... ...... ..+|.|.+++.+|+
T Consensus 309 V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~---------~~~L~i~~v~~~d~ 379 (404)
T 3p3y_A 309 VKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVA---------GDTIIFRDTQISSR 379 (404)
T ss_dssp EEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEE---------TTEEEESSCCSSCC
T ss_pred EeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEec---------CCEEEEeecCHHHC
Confidence 467777777778899999999999999999999999998776643221 111111 12499999999999
Q ss_pred eEEEEEEEeCCceeEEEEEEEeec
Q psy12803 445 DTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 445 G~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
|.|+|.|.|..|....++.|.|.+
T Consensus 380 G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 380 AVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp CEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999999998864
No 33
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=6.8e-19 Score=176.06 Aligned_cols=157 Identities=18% Similarity=0.273 Sum_probs=121.0
Q ss_pred EEEEcCCeEEEEEecCCCCCC--ceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-----------
Q psy12803 301 IVVREGDNVRLRCVATGHPKP--SIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p--~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N----------- 367 (902)
..+.+|++++|.|.+.+.|.+ .+.|+|++..+..... ......|.|. +.+|+|.|+|.|.|
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~----~~~~~~l~i~--~~~d~G~Y~C~~~n~~~~~~~l~V~ 81 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDAL----PGQKTEFKVD--SDDQWGEYSCVFLPEPMGTANIQLH 81 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTC----CCSEEEEEEC--GGGCCEEEEEEEESTTSCEEEEEEC
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccc----cCCcEEEEEe--chhhCeEEEEEEECCcCcEEEEEEe
Confidence 568899999999999987777 8999997755432211 1112345555 68999999999997
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccC-CceEEEEe---cCCeeeecC-CceEEEeecCCCceeeEeEEEEeccC-C
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFP-LSVRYWEF---IDGTLIEHD-GVKYSISDVDKGSYQYIMQLNISNVN-I 441 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P-~P~v~W~k---~~~~l~~~~-~~~~~~~~~~~~s~~~~stL~I~~V~-~ 441 (902)
.+|.+...+....+.+|+.+.|.|.+.+.| .|.+.|++ ++..+.... ..++.+..... .++|.|.+++ .
T Consensus 82 ~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~v~~~ 156 (184)
T 3b5h_A 82 GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQG-----RSELHIENLNME 156 (184)
T ss_dssp CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETT-----EEEEEECSCCTT
T ss_pred cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCC-----eeEEEEeecccc
Confidence 677777777777899999999999999999 79999999 555544322 23444433221 3469999999 9
Q ss_pred CCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 442 SDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 442 ~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 157 ~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 157 ADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp TSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred ccCceEEEEEEeCCCcceEEEEEEEec
Confidence 999999999999999999999998864
No 34
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.80 E-value=3.4e-19 Score=192.57 Aligned_cols=171 Identities=22% Similarity=0.272 Sum_probs=129.6
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccce-eccCC--cEEEEeeeeecCceeEEeecC----
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDS-AVASS--TLNFTRINRINMGAYMCLADN---- 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~-~~~~~--sL~I~~Vt~~DsG~YtC~A~N---- 367 (902)
+..+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+......... ...++ +|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 87 (305)
T 2nzi_A 8 KEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGS 87 (305)
T ss_dssp EECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEE
T ss_pred eecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCC
Confidence 34566789999999999999999999999999987665433221111 12233 899999999999999999988
Q ss_pred ----------CCCEEEEc-----CceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 368 ----------VPPQILIR-----NRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 368 ----------~~P~i~~~-----p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
.+|.+... +..+.+.+|+.+.|.|.+.+.|.|.+.|++++..+..... +.+..... ..
T Consensus 88 ~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~~~~~~-----~~ 160 (305)
T 2nzi_A 88 VSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGH--YQVIVTRS-----FT 160 (305)
T ss_dssp EEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSS--CEEEECSS-----EE
T ss_pred ccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCc--EEEEEcCC-----ce
Confidence 12222111 1345678899999999999999999999998776643322 22222111 24
Q ss_pred EEEEec-cCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 433 QLNISN-VNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 433 tL~I~~-V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.+ ++.+|+|.|+|.|.|..|..+.++.|.|...|..
T Consensus 161 ~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~ 201 (305)
T 2nzi_A 161 SLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDP 201 (305)
T ss_dssp EEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCC
T ss_pred EEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCC
Confidence 599999 9999999999999999999999999999876543
No 35
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.80 E-value=5.4e-19 Score=177.22 Aligned_cols=155 Identities=17% Similarity=0.210 Sum_probs=120.4
Q ss_pred cEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccC------------Cccce------eccCCcEEEEeeeeecCcee
Q psy12803 300 PIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLG------------SWKDS------AVASSTLNFTRINRINMGAY 361 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~------------~~~~~------~~~~~sL~I~~Vt~~DsG~Y 361 (902)
.+.+.+|++++|.|.+.+.|.+.+.|+|++...+... ..+.. .....+|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 3678999999999999999999999999876422210 01111 11234699999999999999
Q ss_pred EEeecCC--CCE----EEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEE
Q psy12803 362 MCLADNV--PPQ----ILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLN 435 (902)
Q Consensus 362 tC~A~N~--~P~----i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~ 435 (902)
+|.+.|. ... ....+....+.+|++++|.|.+.+.|.|.+.|++++..+.. . ..+|.
T Consensus 84 ~C~~~~~~~~~~l~V~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~-----------~------~~~L~ 146 (184)
T 2ny1_B 84 ICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ-----------G------GKTLS 146 (184)
T ss_dssp EEEETTEEEEEEEEEEEEEESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEE-----------E------SSEEE
T ss_pred EEEEEcCCCcEEEEEEEecCCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcccc-----------C------ceEEE
Confidence 9999991 001 11124456789999999999999999999999988765411 1 12499
Q ss_pred EeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 436 ISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 436 I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
|.+++.+|+|.|+|.|.|..+..+.++.|.|...+.
T Consensus 147 i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 147 VSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 182 (184)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred EecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCC
Confidence 999999999999999999999999999999987654
No 36
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.80 E-value=2.1e-19 Score=192.60 Aligned_cols=168 Identities=21% Similarity=0.313 Sum_probs=122.7
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccC---CcEEEEeeeeecCceeEEeecC----
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVAS---STLNFTRINRINMGAYMCLADN---- 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~---~sL~I~~Vt~~DsG~YtC~A~N---- 367 (902)
...+.++.+.+|++++|.|.+.+.|. .+.|+|.++..+.... +.....+ .+|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~ 85 (291)
T 2wim_A 8 TISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQ-RVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQ 85 (291)
T ss_dssp EESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBT-TEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSC
T ss_pred EEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCC-cEEEecCCCEEEEEEccCCcccCEEEEEEEecccCc
Confidence 33566788999999999999999875 8999995554443322 2222222 4899999999999999999988
Q ss_pred -----------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEE
Q psy12803 368 -----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 368 -----------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I 436 (902)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++.... .. +|.|
T Consensus 86 ~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~------~L~i 157 (291)
T 2wim_A 86 TQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA--NN------NLQI 157 (291)
T ss_dssp EEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECT--TS------CEEE
T ss_pred eEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEcc--CC------CEEE
Confidence 2333333455667899999999999999999999999988776544444444332 22 2999
Q ss_pred eccCCCCCeEEEEEEEeCCcee--EEEEEEEeecCCCC
Q psy12803 437 SNVNISDFDTYRCISKNEVDIA--KGSLILFESNAKTP 472 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G~~--~~s~~L~V~~~p~~ 472 (902)
.+++.+|+|.|+|.|.|..+.. ...+.|.|..++..
T Consensus 158 ~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~ 195 (291)
T 2wim_A 158 LNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAI 195 (291)
T ss_dssp TTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCC
T ss_pred EecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCcc
Confidence 9999999999999999987543 45667777665543
No 37
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.80 E-value=3.3e-19 Score=183.55 Aligned_cols=151 Identities=15% Similarity=0.145 Sum_probs=115.9
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCc-eEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC--------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPS-IIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN-------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~-v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-------- 367 (902)
.+....+.+|++++|.|.+.+.|.+. +.|+|++..+.. ..++|.|.+++.+|+|.|+|.|.|
T Consensus 13 ~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~---------~~~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~~ 83 (204)
T 3sgj_C 13 EPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISS---------QASSYFIDAATVDDSGEYRCQTQLSTLSDPVQ 83 (204)
T ss_dssp ESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESC---------CSSEEEESSCCGGGCEEEEEEETTSBCCCCEE
T ss_pred cCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEccc---------CccEEEEecccccCCEEEEEEeCCCcccccEE
Confidence 44557899999999999999988776 999997654321 127899999999999999999998
Q ss_pred ----CCCEEEEcCceeeeecCceEEEEEEeecc-CCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCC
Q psy12803 368 ----VPPQILIRNRRVGVPIGRTATLECEVEAF-PLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNIS 442 (902)
Q Consensus 368 ----~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~ 442 (902)
.+|.+...+. ..+.+|++++|.|.+.+. |.+.+.|++++..+.... .. .+|.|.+++.+
T Consensus 84 l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~---------~~------~~L~i~~v~~~ 147 (204)
T 3sgj_C 84 LEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFH---------HN------SDFYIPKATLK 147 (204)
T ss_dssp EEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEE---------EC------CCEEESSCCGG
T ss_pred EEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeeccc---------CC------ceEEECcCCcc
Confidence 3444444443 668899999999999766 668999998876653210 11 23999999999
Q ss_pred CCeEEEEEEEe-CCceeEEEEEEEeecCCCC
Q psy12803 443 DFDTYRCISKN-EVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 443 DsG~YtC~A~N-~~G~~~~s~~L~V~~~p~~ 472 (902)
|+|.|+|.|.| ..+..+..+.|.|..++..
T Consensus 148 D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~ 178 (204)
T 3sgj_C 148 DSGSYFCRGLVGSKNVSSETVQITITQGLAV 178 (204)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred cCEEEEEEEEeCCCceecCcEEEEEeCcCCC
Confidence 99999999999 4455677888888876544
No 38
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.80 E-value=1.2e-19 Score=184.53 Aligned_cols=165 Identities=22% Similarity=0.363 Sum_probs=121.0
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccc---------cCCccceeccCCcEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPIT---------LGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~---------~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+.++.+.+|+++.|.|.+.+.|.+.+.|+|++..+.. ............+|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 86 (212)
T 1f97_A 7 AQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSE 86 (212)
T ss_dssp SCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEEEEE
T ss_pred cCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEEEEEEc
Confidence 45668899999999999999999999999998766311 111122233348899999999999999999986
Q ss_pred ----------------CCCEEEEcCceeeeecCceEEEEEE-eeccCCceEEEEecCC-eeeecCC-------ceEEEee
Q psy12803 368 ----------------VPPQILIRNRRVGVPIGRTATLECE-VEAFPLSVRYWEFIDG-TLIEHDG-------VKYSISD 422 (902)
Q Consensus 368 ----------------~~P~i~~~p~~~~v~~G~~v~L~C~-a~g~P~P~v~W~k~~~-~l~~~~~-------~~~~~~~ 422 (902)
.+|.+...+....+.+|+.++|.|. +.+.|.|.+.|++++. .+..... ..+...
T Consensus 87 ~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~- 165 (212)
T 1f97_A 87 EGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTID- 165 (212)
T ss_dssp TTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEEC-
T ss_pred cCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEec-
Confidence 2233322233456889999999999 7999999999999887 5543221 112211
Q ss_pred cCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee--EEEEEEEeec
Q psy12803 423 VDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA--KGSLILFESN 468 (902)
Q Consensus 423 ~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~--~~s~~L~V~~ 468 (902)
... ++|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|.+
T Consensus 166 ~~~------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 166 PKS------GDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp TTT------CCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred CCC------ceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 112 349999999999999999999999988 5566666654
No 39
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.80 E-value=4e-19 Score=183.81 Aligned_cols=152 Identities=22% Similarity=0.303 Sum_probs=124.4
Q ss_pred eeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC------
Q psy12803 294 HIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------ 367 (902)
Q Consensus 294 ~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------ 367 (902)
.+..+.++.+.+|+++.|.|.+.+.|.+.+.|+|++..+.. ....+|.|.+++.+|+|.|+|.|.|
T Consensus 21 i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~ 92 (218)
T 3k0w_A 21 ITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPN--------GNTSELIFNAVHVKDAGFYVCRVNNNFTFEF 92 (218)
T ss_dssp EEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTT--------CCSSEEEETTCCGGGCEEEEEEEECTTCCEE
T ss_pred EEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCC--------CCCCEEEEccCChhhCeEeEEEEEcCCCCce
Confidence 34466778999999999999999999999999997655422 1356899999999999999999998
Q ss_pred ---------CC---------------CEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeec
Q psy12803 368 ---------VP---------------PQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDV 423 (902)
Q Consensus 368 ---------~~---------------P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~ 423 (902)
.. |.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....
T Consensus 93 s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~--------- 163 (218)
T 3k0w_A 93 SQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET--------- 163 (218)
T ss_dssp CCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCC---------
T ss_pred eeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCC---------
Confidence 11 566666677889999999999999999999999999876553211
Q ss_pred CCCceeeEeEEEEeccCCCCCeEEEEEEEeCCce-eEEEEEEEeecC
Q psy12803 424 DKGSYQYIMQLNISNVNISDFDTYRCISKNEVDI-AKGSLILFESNA 469 (902)
Q Consensus 424 ~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~-~~~s~~L~V~~~ 469 (902)
. .+|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|...
T Consensus 164 -~------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 164 -K------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp -S------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC-
T ss_pred -C------CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCC
Confidence 1 23999999999999999999999988 467778887663
No 40
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.80 E-value=6.2e-19 Score=189.51 Aligned_cols=168 Identities=16% Similarity=0.232 Sum_probs=127.1
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCC-CceEEecCCCcccccCCccceeccCCcEEEEeeeeecCc-eeEEeecC-------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPK-PSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMG-AYMCLADN------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~-p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG-~YtC~A~N------- 367 (902)
.+..+.+.+|+++.|.|.+.+ |. +.++|++.++..+.. ..+.....++.|.|.+++.+|+| .|+|.|.|
T Consensus 97 ~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~-~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s 174 (290)
T 2o26_X 97 VGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPT-DLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHS 174 (290)
T ss_dssp CCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCT-TCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEEC
T ss_pred cccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCC-CCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEe
Confidence 455688899999999999996 87 999995434444332 22334455678999999999999 99999988
Q ss_pred ------------CCCEEEEcCceeeeecCceEEEEEEeeccCCce-EEEEecCCee----eecCCceEEEeecCCCceee
Q psy12803 368 ------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSV-RYWEFIDGTL----IEHDGVKYSISDVDKGSYQY 430 (902)
Q Consensus 368 ------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~-v~W~k~~~~l----~~~~~~~~~~~~~~~~s~~~ 430 (902)
.+|.+...+....+.+|++++|.|.+.+.|.|. +.|++++..+ .......+. .......
T Consensus 175 ~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 250 (290)
T 2o26_X 175 DKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHR----GDFNYER 250 (290)
T ss_dssp CCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEE----ETTEEEE
T ss_pred EEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeeccccccc----CceeeEE
Confidence 345666666667889999999999999999996 9999998774 222221111 1112234
Q ss_pred EeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCC
Q psy12803 431 IMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 431 ~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
.++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.++|
T Consensus 251 ~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 251 QETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp EEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred EEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 5679999999999999999999999999999999987653
No 41
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.80 E-value=7.3e-19 Score=188.19 Aligned_cols=171 Identities=15% Similarity=0.201 Sum_probs=131.3
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCc-eEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeec-C-----
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPS-IIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLAD-N----- 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~-v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~-N----- 367 (902)
+..+..+.+.+|+++.|.|.+.+.+.+. +.|++.++..+... .+.....++.|.|.+++.+|+|.|+|.|. |
T Consensus 93 ~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~ 171 (289)
T 3ejj_X 93 NLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRK-TVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGREST 171 (289)
T ss_dssp EESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTT-CCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred ecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCC-ccEEECCCCCEEEeecccccCEEEEEEEEeCCCccc
Confidence 3445678899999999999999977665 99987665544322 23444566789999999999999999998 4
Q ss_pred -------------CCCEEEEcCceeeeecCceEEEEEEeec-cCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeE
Q psy12803 368 -------------VPPQILIRNRRVGVPIGRTATLECEVEA-FPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQ 433 (902)
Q Consensus 368 -------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~st 433 (902)
.+|.+...+....+.+|+++.|.|.+.+ .|.+.+.|++++..+.... .... ........++
T Consensus 172 ~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~--~~~~---~~~~~~~~~~ 246 (289)
T 3ejj_X 172 STGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPL--NSDF---QDNYYKKVRA 246 (289)
T ss_dssp CCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCE--EEEE---CSSSEEEEEE
T ss_pred cccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccC--Cccc---ccceEEeeEE
Confidence 3566777777777789999999999998 7999999999876653211 1111 1222334667
Q ss_pred EEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 434 LNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 434 L~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
|.|.+++.+|+|.|+|.|.|..|..++++.|.+...+.
T Consensus 247 L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~~ 284 (289)
T 3ejj_X 247 LSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESHH 284 (289)
T ss_dssp EEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC----
T ss_pred EEEEeecccCCEEEEEEEEcCCCCccccEEEEEEeccc
Confidence 99999999999999999999999999999999876543
No 42
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.79 E-value=6e-19 Score=191.73 Aligned_cols=167 Identities=20% Similarity=0.307 Sum_probs=126.5
Q ss_pred cEEEEcCCeEEEEEec------CCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeec-C-----
Q psy12803 300 PIVVREGDNVRLRCVA------TGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLAD-N----- 367 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a------~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~-N----- 367 (902)
...+.+|+++.|.|.+ .+.|.+.+.|+|++..+.... ......++.|.|.+++.+|+|.|+|.|. |
T Consensus 112 ~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~--~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~ 189 (315)
T 1itb_B 112 KQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN--IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQ 189 (315)
T ss_dssp EEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCS--SSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEE
T ss_pred ceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCcc--ceEeecCceEEEEeceehhCcEEEEEEEcCCCCcE
Confidence 3578899999999998 889999999999876654322 2334456799999999999999999999 5
Q ss_pred -----------------CCCEEEEcCce-eeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCc----eEEEeecCC
Q psy12803 368 -----------------VPPQILIRNRR-VGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGV----KYSISDVDK 425 (902)
Q Consensus 368 -----------------~~P~i~~~p~~-~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~----~~~~~~~~~ 425 (902)
.+|.+...+.. +.+.+|+.++|.|.+.+.|.|.+.|++++..+...... .+.+.....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~ 269 (315)
T 1itb_B 190 YPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPAN 269 (315)
T ss_dssp EEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSC
T ss_pred EEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCC
Confidence 23444333332 46889999999999999999999999987666443221 111111111
Q ss_pred -CceeeEeEEEEeccCCCC-CeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 426 -GSYQYIMQLNISNVNISD-FDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 426 -~s~~~~stL~I~~V~~~D-sG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
......++|.|.+++.+| +|.|+|.|.|..|...+++.|.|..
T Consensus 270 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 270 KRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp GGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECCC
T ss_pred CceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEecC
Confidence 112245679999999999 9999999999999999999998853
No 43
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.79 E-value=2.1e-19 Score=184.48 Aligned_cols=167 Identities=25% Similarity=0.362 Sum_probs=123.5
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCC-ccceeccCCcE----EEEeeeeecCceeEEeecC--
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGS-WKDSAVASSTL----NFTRINRINMGAYMCLADN-- 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~-~~~~~~~~~sL----~I~~Vt~~DsG~YtC~A~N-- 367 (902)
+..+.++.+.+|++++|.|.+.+.|.+.|.|+|++..+..... .......++.+ .|.+++.+|+|.|+|.|.|
T Consensus 13 ~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~ 92 (217)
T 2vr9_A 13 IEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRV 92 (217)
T ss_dssp EECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETT
T ss_pred ecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCC
Confidence 3456678899999999999999999999999997765543221 11222333333 6889999999999999987
Q ss_pred --------------CCCEEEEcCceeeeecCceEEEEEEe-eccCCceEEEEecCCeeeecC------CceEEEeecCCC
Q psy12803 368 --------------VPPQILIRNRRVGVPIGRTATLECEV-EAFPLSVRYWEFIDGTLIEHD------GVKYSISDVDKG 426 (902)
Q Consensus 368 --------------~~P~i~~~p~~~~v~~G~~v~L~C~a-~g~P~P~v~W~k~~~~l~~~~------~~~~~~~~~~~~ 426 (902)
.++.+...+....+.+|+.+.|.|.+ .+.|.|.+.|++++..+.... ..++... .
T Consensus 93 g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~--~-- 168 (217)
T 2vr9_A 93 GQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIV--D-- 168 (217)
T ss_dssp EEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEE--T--
T ss_pred CccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEec--C--
Confidence 12333334456678899999999999 899999999999877664321 1112211 1
Q ss_pred ceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecC
Q psy12803 427 SYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 427 s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~ 469 (902)
..+|.|.+++.+|+|.|+|.|.|..|....++.+.+...
T Consensus 169 ----~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~ 207 (217)
T 2vr9_A 169 ----GGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQV 207 (217)
T ss_dssp ----TTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred ----CCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEEe
Confidence 124999999999999999999999999987766666543
No 44
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.79 E-value=1.8e-19 Score=212.48 Aligned_cols=192 Identities=12% Similarity=0.114 Sum_probs=139.3
Q ss_pred ccccccccccCCCCCCCCcccccCCcccCCceeecCCcEEEEcCCeEEEEEecC-CCCCCceEEecCCCcccccCCcc--
Q psy12803 263 AICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVAT-GHPKPSIIWKTSENKPITLGSWK-- 339 (902)
Q Consensus 263 g~c~~kN~scs~~s~~~~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~-G~P~p~v~W~k~~~~~~~~~~~~-- 339 (902)
-.|.+.|..+........+.+..+|.+ .+.++.+.+|+++.|.|.+. +.|.+.|+|+|++..+.......
T Consensus 206 Y~C~A~N~~G~~~~~~~~l~V~~~p~~-------~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~ 278 (527)
T 3qs9_E 206 IRCCARNELGRECTRLFTIDLNQTPQT-------TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMS 278 (527)
T ss_dssp EEEEEECSSCEEEEECEEEESSSCCCC-------SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEE
T ss_pred EEEEEEeCCCcccceEEEEEEeccCcc-------CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeee
Confidence 567777766554443333444444443 23467899999999999997 89999999999887654321110
Q ss_pred -----ceeccCCcEEEEeeeeecCceeEEeecC-----------CCCEEEEcC--ceeeeecCceEEEEEEeeccCCceE
Q psy12803 340 -----DSAVASSTLNFTRINRINMGAYMCLADN-----------VPPQILIRN--RRVGVPIGRTATLECEVEAFPLSVR 401 (902)
Q Consensus 340 -----~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-----------~~P~i~~~p--~~~~v~~G~~v~L~C~a~g~P~P~v 401 (902)
......++|.|.+++.+|+|.|+|.|.| .+|.+...+ ..+.+.+|+++.|.|.+.|.|.|.|
T Consensus 279 ~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i 358 (527)
T 3qs9_E 279 TYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRC 358 (527)
T ss_dssp EEETTTEEEEEEEEEESSCCGGGCEEEEEEETTEEEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEE
T ss_pred eeccCcceeeEEEEEEccCCcccCeEEEEEEEeCCCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEE
Confidence 1112234699999999999999999998 445554433 3466889999999999999999999
Q ss_pred EEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 402 YWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 402 ~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
.|++++..+...... . ... .+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|..
T Consensus 359 ~W~k~g~~l~~~~~~--~---~~~------~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i 418 (527)
T 3qs9_E 359 TWTFSRKSFPCEQKG--L---DNG------YSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQV 418 (527)
T ss_dssp EEEETTEEEECBCCB--C---SSS------SEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEE
T ss_pred EEEECCEECcCCccc--c---cCC------cEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeE
Confidence 999988776443221 1 112 24999999999999999999999999999999999866543
No 45
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.79 E-value=1.1e-18 Score=177.02 Aligned_cols=167 Identities=12% Similarity=0.177 Sum_probs=121.9
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCC---ceEEecCCCcccccC----------------Cccc------eeccCCcEE
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKP---SIIWKTSENKPITLG----------------SWKD------SAVASSTLN 349 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p---~v~W~k~~~~~~~~~----------------~~~~------~~~~~~sL~ 349 (902)
+..+..++|.+|++|+|.|.+.+.|.+ .|+|+|++....... ..+. ....+.+|.
T Consensus 3 l~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~ 82 (218)
T 4frw_A 3 LETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVL 82 (218)
T ss_dssp EECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEE
T ss_pred EeCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEE
Confidence 345667899999999999999997765 489999765432110 0001 111235799
Q ss_pred EEeeeeecCceeEEeecC----------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeec
Q psy12803 350 FTRINRINMGAYMCLADN----------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEH 413 (902)
Q Consensus 350 I~~Vt~~DsG~YtC~A~N----------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~ 413 (902)
|.+++.+|+|.|.|.+.+ .++..........+.+++.+.|.|.+.+.|.|.|.|++++..+...
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~ 162 (218)
T 4frw_A 83 LRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSS 162 (218)
T ss_dssp ESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEE
T ss_pred EeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccC
Confidence 999999999999999987 2222223334455678899999999999999999999988766432
Q ss_pred CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 414 DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 414 ~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
.. . .........++|.|.++..+|+|.|+|+|.|..|..+..+.|.|.
T Consensus 163 ~~--~----~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 163 RS--F----KHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EE--E----ECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred ce--E----ecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 21 1 122334456789999999999999999999999988766666654
No 46
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.79 E-value=2.9e-19 Score=198.63 Aligned_cols=170 Identities=16% Similarity=0.163 Sum_probs=130.5
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCc-eeEEeecC-------
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMG-AYMCLADN------- 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG-~YtC~A~N------- 367 (902)
..+..+.+.+|++++|.|.+.+.|.+.+.|++++..+..... ......+++|.|.+++.+|+| .|+|.|.|
T Consensus 163 ~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~ 241 (347)
T 2ifg_A 163 VQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVM-KSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEV 241 (347)
T ss_dssp EECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEEC-CCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCE
T ss_pred ccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccc-cceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEE
Confidence 345667889999999999999999999999998876543322 223345568999999999999 99999988
Q ss_pred -------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccC
Q psy12803 368 -------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVN 440 (902)
Q Consensus 368 -------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~ 440 (902)
.+|.+ ....+.+|+.++|.|.+.|.|.|.|.|++++..+...............+......+|.|.+++
T Consensus 242 ~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 317 (347)
T 2ifg_A 242 SVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPT 317 (347)
T ss_dssp EECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCC
T ss_pred EEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCC
Confidence 22332 2234568999999999999999999999887766533332222222111223346679999999
Q ss_pred CCCCeEEEEEEEeCCceeEEEEEEEeecCC
Q psy12803 441 ISDFDTYRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 441 ~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
.+|+|.|+|+|.|.+|.+++++.|.|.++|
T Consensus 318 ~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 318 HVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred cccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 999999999999999999999999987653
No 47
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.79 E-value=3e-19 Score=204.85 Aligned_cols=192 Identities=12% Similarity=0.112 Sum_probs=132.8
Q ss_pred ccccccccccCCCCCCCCcccccCCcccCCceeecCCcEEEEcCCeEEEEEecCC-CCCCceEEecCCCcccccCCc---
Q psy12803 263 AICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATG-HPKPSIIWKTSENKPITLGSW--- 338 (902)
Q Consensus 263 g~c~~kN~scs~~s~~~~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G-~P~p~v~W~k~~~~~~~~~~~--- 338 (902)
-.|.+.|..+........+.+..+|.+ .+.+..+.+|+++.|.|.+.+ .|.|.|+|+|++..+......
T Consensus 206 Y~C~A~N~~G~~~~~~~~l~V~~~p~~-------~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~ 278 (423)
T 3qs7_E 206 IRCCARNELGRECTRLFTIDLNQTPQT-------TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMS 278 (423)
T ss_dssp EEEEEECSSCEEEEECEEEESSSCCCS-------STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEE
T ss_pred EEEEEEcCCCCcceeeEEEEEecCCcc-------CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecc
Confidence 567777776654332223333333333 233578999999999999998 788999999988765332110
Q ss_pred ----cceeccCCcEEEEeeeeecCceeEEeecC-----------CCCEEEEcC--ceeeeecCceEEEEEEeeccCCceE
Q psy12803 339 ----KDSAVASSTLNFTRINRINMGAYMCLADN-----------VPPQILIRN--RRVGVPIGRTATLECEVEAFPLSVR 401 (902)
Q Consensus 339 ----~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-----------~~P~i~~~p--~~~~v~~G~~v~L~C~a~g~P~P~v 401 (902)
.......++|.|.+++.+|+|.|+|.|.| .+|.+...+ ..+.+.+|+++.|.|.+.|+|.|.|
T Consensus 279 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i 358 (423)
T 3qs7_E 279 TYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRC 358 (423)
T ss_dssp EEETTTEEEEEEEEEESSCCTTTCEEEEEEETTEEEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEE
T ss_pred cccCCceeEEEEEEEEeecCHHHCEEEEEEEecCCCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeE
Confidence 01122334799999999999999999999 456555544 3567889999999999999999999
Q ss_pred EEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 402 YWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 402 ~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
.|++++..+...... ..... .+.+..+..+|+|.|+|.|.|..|.++.++.|.|...+..
T Consensus 359 ~W~k~g~~l~~~~~~-----~~~~~------~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~ 418 (423)
T 3qs7_E 359 TWTFSRKSFPCEQKG-----LDNGY------SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKH 418 (423)
T ss_dssp EEEETTEEEECBCCB-----CSSSS------EEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-------
T ss_pred EEEECCEECCCcccc-----ccCCc------EEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCcc
Confidence 999988777543210 00000 1223566789999999999999999999999999887654
No 48
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.79 E-value=2.2e-19 Score=182.95 Aligned_cols=168 Identities=23% Similarity=0.359 Sum_probs=122.5
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCC---ccceeccCC-----cEEEEeeeeecCceeEEeec
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGS---WKDSAVASS-----TLNFTRINRINMGAYMCLAD 366 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~---~~~~~~~~~-----sL~I~~Vt~~DsG~YtC~A~ 366 (902)
+..+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+..... .......++ .|.|.+++.+|+|.|+|.|.
T Consensus 13 ~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 92 (212)
T 2v9r_A 13 VEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVAR 92 (212)
T ss_dssp EECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEE
T ss_pred ecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEE
Confidence 3456678899999999999999999999999998765433221 112222333 34556679999999999998
Q ss_pred C----------------CCCEEEEcCceeeeecCceEEEEEEe-eccCCceEEEEecCCeeeecCCceEEEeecCCCcee
Q psy12803 367 N----------------VPPQILIRNRRVGVPIGRTATLECEV-EAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQ 429 (902)
Q Consensus 367 N----------------~~P~i~~~p~~~~v~~G~~v~L~C~a-~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~ 429 (902)
| .++.+...+....+.+|+.++|.|.+ .+.|.+.+.|++++..+... ..++... .
T Consensus 93 n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~-~~~~~~~---~---- 164 (212)
T 2v9r_A 93 NYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDK-DERITIR---G---- 164 (212)
T ss_dssp ETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTT-STTEEEE---T----
T ss_pred CCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCC-cceEEcc---C----
Confidence 7 12222233455678899999999999 89999999999987766432 2222221 1
Q ss_pred eEeEEEEeccCCCCCeEEEEEEEeCCceeEE-EEEEEeecCCCC
Q psy12803 430 YIMQLNISNVNISDFDTYRCISKNEVDIAKG-SLILFESNAKTP 472 (902)
Q Consensus 430 ~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~-s~~L~V~~~p~~ 472 (902)
.+|.|.+++.+|+|.|+|.|.|..|...+ .+.|.|..+|..
T Consensus 165 --~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~ 206 (212)
T 2v9r_A 165 --GKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSF 206 (212)
T ss_dssp --TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred --CeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchH
Confidence 24999999999999999999999998765 489998876654
No 49
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.79 E-value=5.8e-19 Score=206.61 Aligned_cols=173 Identities=20% Similarity=0.307 Sum_probs=134.1
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCc-eEEecCCCcc--cccCCccc----eeccCCcEEEEeeeeecCceeEEeecC--
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPS-IIWKTSENKP--ITLGSWKD----SAVASSTLNFTRINRINMGAYMCLADN-- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~-v~W~k~~~~~--~~~~~~~~----~~~~~~sL~I~~Vt~~DsG~YtC~A~N-- 367 (902)
.+....+.+|++++|.|.+.+.|.+. ++|+|++..+ ........ .....++|.|.+++.+|+|.|+|.|.|
T Consensus 217 ~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~ 296 (524)
T 2ec8_A 217 SKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTF 296 (524)
T ss_dssp SCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSS
T ss_pred cCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecC
Confidence 45567899999999999999999887 9999988763 21111001 123356899999999999999999998
Q ss_pred ------------CCCEEEEcC---ceeeeecCceEEEEEEeeccCCce-EEEEecCCeeeecCCceEEEeecCCCceeeE
Q psy12803 368 ------------VPPQILIRN---RRVGVPIGRTATLECEVEAFPLSV-RYWEFIDGTLIEHDGVKYSISDVDKGSYQYI 431 (902)
Q Consensus 368 ------------~~P~i~~~p---~~~~v~~G~~v~L~C~a~g~P~P~-v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~ 431 (902)
.+|.+...+ ..+.+.+|++++|.|.+.+.|.|. +.|++++..+..... ++... ...+.+...
T Consensus 297 g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~-~~~~~-~~~~~~~~~ 374 (524)
T 2ec8_A 297 GSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWE-DYPKS-ENESNIRYV 374 (524)
T ss_dssp CEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBC-CEESC-CSSSCCEEE
T ss_pred CceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCcc-ceeEE-ccCCCceeE
Confidence 456665543 367899999999999999999999 999998877654332 22222 222223456
Q ss_pred eEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 432 MQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 432 stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.
T Consensus 375 ~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~ 414 (524)
T 2ec8_A 375 SELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPE 414 (524)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEE
T ss_pred EEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCe
Confidence 7899999999999999999999999999999999976554
No 50
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.79 E-value=4.2e-19 Score=180.31 Aligned_cols=150 Identities=15% Similarity=0.141 Sum_probs=108.6
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC---------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN--------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N--------- 367 (902)
.+.. .+.+|++|+|.|.+.+ +.+.+.|+|++..+.............++|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~ 88 (196)
T 3p2t_A 11 EPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSD 88 (196)
T ss_dssp ESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCC
T ss_pred cCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCc
Confidence 3444 7899999999999999 7789999998776533211111123456899999999999999999987
Q ss_pred ----------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEe
Q psy12803 368 ----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 368 ----------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
.+|.+...+.. .+.+|++++|.|.+.+. .+.+.|++++..+.... ....... .....+|.|.
T Consensus 89 ~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~-~~~~~~~-----~~~~~~L~i~ 160 (196)
T 3p2t_A 89 PLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLC-LRSEHGA-----QQHQAEFPMS 160 (196)
T ss_dssp CEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGS-EEEEEEE-----EEEEEEEEEC
T ss_pred cEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCccccee-ecccccc-----cCcceEEEeC
Confidence 13444443332 57899999999999884 46899999887653322 1111100 1123569999
Q ss_pred ccCCCCCeEEEEEEEeCCc
Q psy12803 438 NVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G 456 (902)
+|+.+|+|.|+|.|.|..+
T Consensus 161 ~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 161 PVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp SCCGGGCEEEEEEEECGGG
T ss_pred CCcccCCCeEEEEEEcCCC
Confidence 9999999999999999876
No 51
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.79 E-value=1.4e-19 Score=184.10 Aligned_cols=162 Identities=19% Similarity=0.212 Sum_probs=117.3
Q ss_pred CcEEEEcCCeEEEEEecCCCC----CCceEEecCCCcc---------------cc----cCCccceec------cCCcEE
Q psy12803 299 SPIVVREGDNVRLRCVATGHP----KPSIIWKTSENKP---------------IT----LGSWKDSAV------ASSTLN 349 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~P----~p~v~W~k~~~~~---------------~~----~~~~~~~~~------~~~sL~ 349 (902)
..+.+.+|++|+|.|.+.+.+ .+.|.|+|.+... .. ....+.... .+.+|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 457899999999999999877 5699999843211 10 001112221 356899
Q ss_pred EEeeeeecCceeEEeecC--------------CCCEEEEcCceeeeecCceEEEEEEe-eccCCceEEEEecCCeeeecC
Q psy12803 350 FTRINRINMGAYMCLADN--------------VPPQILIRNRRVGVPIGRTATLECEV-EAFPLSVRYWEFIDGTLIEHD 414 (902)
Q Consensus 350 I~~Vt~~DsG~YtC~A~N--------------~~P~i~~~p~~~~v~~G~~v~L~C~a-~g~P~P~v~W~k~~~~l~~~~ 414 (902)
|.+++.+|+|.|+|.|.| .+|.+........+.+|+.++|.|.+ .+.|.|.+.|++++.......
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~ 167 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPT 167 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCG
T ss_pred EccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCc
Confidence 999999999999999988 33333333333457889999999999 899999999998644322111
Q ss_pred CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecC
Q psy12803 415 GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 415 ~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~ 469 (902)
... ..... .+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 168 ~~~---~~~~~------~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 168 PWL---AEMTS------PVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp GGG---GGTTS------SEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred cce---eccCC------CEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 111 01111 24999999999999999999999999999999998743
No 52
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.79 E-value=1.3e-18 Score=194.84 Aligned_cols=159 Identities=19% Similarity=0.269 Sum_probs=127.1
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcccee---ccCCcEEEEeeeeecCceeEEeecC------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA---VASSTLNFTRINRINMGAYMCLADN------ 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~---~~~~sL~I~~Vt~~DsG~YtC~A~N------ 367 (902)
.+....+.+|+++.|.|.+.+.|.+.+.|+|++..+......+... ....+|.|.+++.+|+|.|+|.|.|
T Consensus 218 ~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 297 (395)
T 1bih_A 218 VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQ 297 (395)
T ss_dssp ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCE
T ss_pred cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCce
Confidence 3566889999999999999999999999999876554322222211 1223799999999999999999999
Q ss_pred ---------CCCEEEEcCce-eeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEe
Q psy12803 368 ---------VPPQILIRNRR-VGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 368 ---------~~P~i~~~p~~-~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
.+|.+...+.. ..+.+|++++|.|.+.|.|.|.+.|++++..+.. . ++.+.. + +|.|.
T Consensus 298 ~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~-~--~~~~~~---~------~L~i~ 365 (395)
T 1bih_A 298 KHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSG-G--RATVTD---S------GLVIK 365 (395)
T ss_dssp EEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCS-S--SEEEET---T------EEEES
T ss_pred EEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCC-C--ceEEEC---C------EEEEe
Confidence 45666666655 7789999999999999999999999998766532 2 333321 1 49999
Q ss_pred ccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 438 NVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 366 ~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 395 (395)
T 1bih_A 366 GVKNGDKGYYGCRATNEHGDKYFETLVQVN 395 (395)
T ss_dssp SCCSTTCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eCCcccCEEEEEEEEccCCCceEEEEEEEC
Confidence 999999999999999999999999999873
No 53
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.78 E-value=4.9e-19 Score=197.86 Aligned_cols=154 Identities=21% Similarity=0.352 Sum_probs=128.9
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC----------
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN---------- 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N---------- 367 (902)
+....+.+|++++|.|.+.+.|.+.+.|+|++..+.. ........|.|.+++.+|+|.|+|.|.|
T Consensus 214 ~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~-----~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 288 (382)
T 1cs6_A 214 PADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTS-----KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGR 288 (382)
T ss_dssp CSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSC-----CCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CCceEEeCCCeEEEEEEEccCCCCEEEEEECCccccc-----EEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEE
Confidence 4567899999999999999999999999998766422 2234567899999999999999999988
Q ss_pred ----CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCC
Q psy12803 368 ----VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISD 443 (902)
Q Consensus 368 ----~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~D 443 (902)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... .++.+. . .+|.|.+++.+|
T Consensus 289 l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~--~~~~~~---~------~~L~i~~v~~~d 357 (382)
T 1cs6_A 289 IIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQ--NRIEVS---G------GELRFSKLVLED 357 (382)
T ss_dssp EEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCC--SSEEEE---T------TEEEESSCCGGG
T ss_pred EEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCC--ceEEEE---C------CEEEECcCCccc
Confidence 4667777777788999999999999999999999999988766432 233322 1 249999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEEEee
Q psy12803 444 FDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 444 sG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
+|.|+|.|.|..|...+++.|.|.
T Consensus 358 ~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 358 SGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEEEEeCCCeEEEEEEEEEe
Confidence 999999999999999999999886
No 54
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.78 E-value=1.7e-19 Score=195.44 Aligned_cols=164 Identities=21% Similarity=0.316 Sum_probs=120.3
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccC---CcEEEEeeee-ecCceeEEeecC---
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVAS---STLNFTRINR-INMGAYMCLADN--- 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~---~sL~I~~Vt~-~DsG~YtC~A~N--- 367 (902)
+..+.++.+.+|++++|.|.+.|.|.+.|.|+|++..+.. .........+ .+|.|.+++. +|+|.|+|.|.|
T Consensus 10 ~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~-~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g 88 (304)
T 2yd9_A 10 IKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNS-QRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVG 88 (304)
T ss_dssp EECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------C-TTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSC
T ss_pred eecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCC-CceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCC
Confidence 3456778899999999999999999999999998766532 2212222122 4799999998 999999999998
Q ss_pred -----------CC-------CEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCC-ceEEEeecCCCce
Q psy12803 368 -----------VP-------PQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDG-VKYSISDVDKGSY 428 (902)
Q Consensus 368 -----------~~-------P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~-~~~~~~~~~~~s~ 428 (902)
.+ |.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+..... .++.. ...+
T Consensus 89 ~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~--~~~~-- 164 (304)
T 2yd9_A 89 EITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQ--LRSG-- 164 (304)
T ss_dssp EECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEE--CTTS--
T ss_pred eEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEe--CCCe--
Confidence 11 6777777778899999999999999999999999998766543221 12222 2222
Q ss_pred eeEeEEEEeccCCCCCeEEEEEEEeCCceeEEE-EEEEee
Q psy12803 429 QYIMQLNISNVNISDFDTYRCISKNEVDIAKGS-LILFES 467 (902)
Q Consensus 429 ~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s-~~L~V~ 467 (902)
+|.|.+++.+|+|.|+|.|.|..|..... +.|.|.
T Consensus 165 ----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~ 200 (304)
T 2yd9_A 165 ----ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVR 200 (304)
T ss_dssp ----CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred ----EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEE
Confidence 39999999999999999999999987632 444443
No 55
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.78 E-value=1.7e-18 Score=176.17 Aligned_cols=163 Identities=14% Similarity=0.154 Sum_probs=113.5
Q ss_pred CcEEEEcCCeEEEEEecCCCCC-----CceEEecCCCcccccCCccceec-----cCCcEEEEeeeeecCceeEEeecCC
Q psy12803 299 SPIVVREGDNVRLRCVATGHPK-----PSIIWKTSENKPITLGSWKDSAV-----ASSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~P~-----p~v~W~k~~~~~~~~~~~~~~~~-----~~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
.++.+.+|+++.|.|.+.+.|. +.+.|+|.+.............. .+.+|.|.+++.+|+|.|+|.|.|.
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 89 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICG 89 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeC
Confidence 4578999999999999999886 89999995444332222111111 2368999999999999999999881
Q ss_pred C------CEEEE--c---Cc--eeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEE
Q psy12803 369 P------PQILI--R---NR--RVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLN 435 (902)
Q Consensus 369 ~------P~i~~--~---p~--~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~ 435 (902)
. -.+.+ . +. ...+.+|+.+.|.|.+.|.|.|.+.|++++..+.. . ......+. ...|.
T Consensus 90 ~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~----~--~~~~~~~~---~~~~~ 160 (202)
T 3bp6_B 90 AAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT----S--HIRTPEGL---YQVTS 160 (202)
T ss_dssp TEEEEEEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE----E--EEECTTSC---EEEEE
T ss_pred CCcceEEEEEEecCCCCcccEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCccC----c--eeeCCCCC---EEEEE
Confidence 1 01111 1 11 11456899999999999999999999887765421 1 11122222 23477
Q ss_pred EeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCC
Q psy12803 436 ISNVNISDFDTYRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 436 I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
|.+++.+|+|.|+|.|.|..|..+.++.|.|..+.
T Consensus 161 i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~~ 195 (202)
T 3bp6_B 161 VLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRM 195 (202)
T ss_dssp EEEECCCTTCCEEEEEEETTTTEEEEEEECC----
T ss_pred EEEEEcCCCCEEEEEEEcCCcccccEEEEEecCcC
Confidence 88899999999999999999999999998886543
No 56
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.78 E-value=5.8e-19 Score=183.26 Aligned_cols=166 Identities=15% Similarity=0.190 Sum_probs=113.0
Q ss_pred CcEEEEcCCeEEEEEecCCCCCC---ceEEecCCCcccc----------cC-----Cccce------eccCCcEEEEeee
Q psy12803 299 SPIVVREGDNVRLRCVATGHPKP---SIIWKTSENKPIT----------LG-----SWKDS------AVASSTLNFTRIN 354 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~P~p---~v~W~k~~~~~~~----------~~-----~~~~~------~~~~~sL~I~~Vt 354 (902)
.++.+.+|++|+|.|.+.+.+.+ .|+|+|++..... .. ..+.. ...+.+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 45789999999999999876554 6999997653210 00 00111 1123479999999
Q ss_pred eecCceeEEeecC------------CCCEEEEcCceeeeecCceEEEEEEeec-cCCceEEEEecCCeeeecCCceEEEe
Q psy12803 355 RINMGAYMCLADN------------VPPQILIRNRRVGVPIGRTATLECEVEA-FPLSVRYWEFIDGTLIEHDGVKYSIS 421 (902)
Q Consensus 355 ~~DsG~YtC~A~N------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P~v~W~k~~~~l~~~~~~~~~~~ 421 (902)
.+|+|.|+|.|.| ..+.+........+.+|+.+.|.|.+.+ .|.|.|.|+++++.++......+ .
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~--~ 169 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPV--V 169 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCC--E
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEE--E
Confidence 9999999999998 1111112233456789999999999998 59999999987766544322222 2
Q ss_pred ecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecC
Q psy12803 422 DVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 422 ~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~ 469 (902)
....+.+. .+.+.+++.+|+|.|+|+|+|.+|..+.++.|.|.++
T Consensus 170 ~~~~g~~~---v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 170 ADGVGLYA---VAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp ECTTSCEE---EEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred ECCCCcEE---EEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 23333322 2445567789999999999999999999999988764
No 57
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.78 E-value=4.4e-19 Score=199.20 Aligned_cols=166 Identities=27% Similarity=0.386 Sum_probs=130.5
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccC-CccceeccCCcEEEEeeeeecCceeEEeecC--------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLG-SWKDSAVASSTLNFTRINRINMGAYMCLADN-------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~-~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-------- 367 (902)
.+..+.+.+|+++.|.|.+.+.|.+.+.|+|++..+.... ..+.....+++|.|.+++.+|+|.|+|.|.|
T Consensus 127 ~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 206 (403)
T 3laf_A 127 QTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGN 206 (403)
T ss_dssp CCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCC
T ss_pred CCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceecc
Confidence 4566889999999999999999999999999887654322 2333445567999999999999999999988
Q ss_pred -------CCC------EEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEE
Q psy12803 368 -------VPP------QILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQL 434 (902)
Q Consensus 368 -------~~P------~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL 434 (902)
..| .+...+....+.+|++++|.|.+.+.|.+.+.|++++..+... ..++.... . ++|
T Consensus 207 ~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~-~~~~~~~~--~------~~L 277 (403)
T 3laf_A 207 EAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLR-SKKYSLLG--G------SNL 277 (403)
T ss_dssp CEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCS-SSSEEEET--T------TEE
T ss_pred ceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCC-CceEEECC--c------cEE
Confidence 111 2333455677889999999999999999999999877665432 22222221 1 249
Q ss_pred EEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 435 NISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 435 ~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.
T Consensus 278 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 314 (403)
T 3laf_A 278 LISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPW 314 (403)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred EEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCc
Confidence 9999999999999999999999999999999887543
No 58
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.78 E-value=4.4e-20 Score=187.39 Aligned_cols=170 Identities=19% Similarity=0.318 Sum_probs=119.3
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccc---------cCCccceeccCCcEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPIT---------LGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~---------~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+..+.+.+|+++.|.|.+.+.|.+.+.|+|++..+.. ............+|.|.+++.+|+|.|+|.|.|
T Consensus 10 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 89 (209)
T 1nbq_A 10 SEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSE 89 (209)
T ss_dssp SCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEEEE
T ss_pred CCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEEEec
Confidence 34567799999999999999999999999998766311 111112223347899999999999999999986
Q ss_pred ----------------CCCEEEEcCceeeeecCceEEEEEEe-eccCCceEEEEecCCeeeecCCceEEEeecCCCceee
Q psy12803 368 ----------------VPPQILIRNRRVGVPIGRTATLECEV-EAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQY 430 (902)
Q Consensus 368 ----------------~~P~i~~~p~~~~v~~G~~v~L~C~a-~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~ 430 (902)
.+|.+........+.+|+.+.|.|.+ .+.|.|.+.|++++..+....................
T Consensus 90 ~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (209)
T 1nbq_A 90 EGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPT 169 (209)
T ss_dssp TTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTT
T ss_pred CCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCC
Confidence 23333333334568899999999997 8999999999998876644322100000000000001
Q ss_pred EeEEEEeccCCCCCeEEEEEEEeCCceeEE--EEEEEe
Q psy12803 431 IMQLNISNVNISDFDTYRCISKNEVDIAKG--SLILFE 466 (902)
Q Consensus 431 ~stL~I~~V~~~DsG~YtC~A~N~~G~~~~--s~~L~V 466 (902)
.++|.|.+++.+|+|.|+|.|.|..|.... .+.|.|
T Consensus 170 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 170 TGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp TCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred cceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 234999999999999999999999998844 444444
No 59
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.77 E-value=4.2e-19 Score=180.48 Aligned_cols=149 Identities=14% Similarity=0.121 Sum_probs=98.8
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-------------
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------------- 367 (902)
..+.+|++|+|.|.+.+.|. .+.|+|++..+............++.|.|.+++.+|+|.|+|.|.|
T Consensus 14 ~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l 92 (196)
T 2d3v_A 14 SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLEL 92 (196)
T ss_dssp SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEE
T ss_pred CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEE
Confidence 37889999999999999776 9999998776532211111233456899999999999999999976
Q ss_pred ---C---CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCC
Q psy12803 368 ---V---PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNI 441 (902)
Q Consensus 368 ---~---~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~ 441 (902)
. +|.+...+ ...+.+|++++|.|.+.+.| +.+.|++++..+...... ... ...+ ....+|.|.+++.
T Consensus 93 ~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~-~~~--~~~~--~~~~~L~I~~v~~ 165 (196)
T 2d3v_A 93 VVTGFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLD-SQL--TPSG--QFQALFPVGPVTP 165 (196)
T ss_dssp EEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEE-CEE--CTTS--CEEEEEECCCCBT
T ss_pred EecCCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccc-ccc--ccCC--CceeEEEeeecCc
Confidence 1 34444333 24688999999999999999 899999988765321110 001 1111 1235699999999
Q ss_pred CCCeEEEEEEEeCCce
Q psy12803 442 SDFDTYRCISKNEVDI 457 (902)
Q Consensus 442 ~DsG~YtC~A~N~~G~ 457 (902)
+|+|.|+|.|.|..+.
T Consensus 166 ~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 166 SHRWMLRCYGSRRHIL 181 (196)
T ss_dssp TBCEEEEEEEEETTEE
T ss_pred ccCeeEEEEEEccCCC
Confidence 9999999999998753
No 60
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.77 E-value=1.3e-18 Score=173.51 Aligned_cols=147 Identities=14% Similarity=0.130 Sum_probs=113.7
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCc-eEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC--------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPS-IIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN-------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~-v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-------- 367 (902)
.+..+.+.+|++++|.|.+.+.|.+. +.|+|++..+. ..+++|.|.+++.+|+|.|+|.+.|
T Consensus 13 ~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~---------~~~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~~ 83 (175)
T 1fnl_A 13 EPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLIS---------SQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQ 83 (175)
T ss_dssp ESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEE---------SSCSEEEESSCCGGGCEEEEEECSSSCCCCCEE
T ss_pred cCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEcc---------CCceEEEEeCCCcccCEEEEEEeeCCcccccEE
Confidence 45556899999999999999988776 78999765432 2356899999999999999999998
Q ss_pred ----CCCEEEEcCceeeeecCceEEEEEEeeccCC-ceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCC
Q psy12803 368 ----VPPQILIRNRRVGVPIGRTATLECEVEAFPL-SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNIS 442 (902)
Q Consensus 368 ----~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~-P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~ 442 (902)
.++.+.. .....+.+|+.++|.|.+.+.|+ +.+.|++++..+... ... ..|.|.+++.+
T Consensus 84 l~V~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~---------~~~------~~L~i~~v~~~ 147 (175)
T 1fnl_A 84 LEVHIGWLLLQ-APRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF---------HHN------SDFHIPKATLK 147 (175)
T ss_dssp EEEECSSEEEE-CSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE---------EEC------CCEEESSCCGG
T ss_pred EEEeCCCceee-CCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC---------CCC------CEEEEcccChh
Confidence 2223222 23356889999999999998765 599999987665221 011 23999999999
Q ss_pred CCeEEEEEEEeCCce-eEEEEEEEeec
Q psy12803 443 DFDTYRCISKNEVDI-AKGSLILFESN 468 (902)
Q Consensus 443 DsG~YtC~A~N~~G~-~~~s~~L~V~~ 468 (902)
|+|.|+|.|.|..+. .+..+.|.|.+
T Consensus 148 d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 148 DSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred hCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 999999999997664 45677777764
No 61
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.77 E-value=1.4e-18 Score=173.43 Aligned_cols=150 Identities=19% Similarity=0.175 Sum_probs=113.3
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCC-ceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC--------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKP-SIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN-------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p-~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-------- 367 (902)
.+..+.+.+|++++|.|.+.+.|.+ .+.|+|++..+. ..+++|.|.+++.+|+|.|+|.+.|
T Consensus 10 ~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~---------~~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~~ 80 (176)
T 1f2q_A 10 NPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSE---------ETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVY 80 (176)
T ss_dssp ESSCSEEETTCCEEEECCTTCC----CCEEEETTEECS---------CCSSEEEECSCCGGGCEEEEEECTTSSCCCCEE
T ss_pred CCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECC---------CCceEEEEeccceecCEEEEEEcCCccccccEE
Confidence 4555789999999999999998875 699999765432 2357899999999999999999998
Q ss_pred ----CCCEEEEcCceeeeecCceEEEEEEee-ccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCC
Q psy12803 368 ----VPPQILIRNRRVGVPIGRTATLECEVE-AFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNIS 442 (902)
Q Consensus 368 ----~~P~i~~~p~~~~v~~G~~v~L~C~a~-g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~ 442 (902)
.++.+. ......+.+|+++.|.|.+. +.|.+.+.|++++..+... .. ..+|.|.+++.+
T Consensus 81 l~V~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~---------~~------~~~L~i~~v~~~ 144 (176)
T 1f2q_A 81 LEVFSDWLLL-QASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW---------YE------NHNISITNATVE 144 (176)
T ss_dssp EEEECSSEEE-EESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC---------CC------SSEEEESSCCGG
T ss_pred EEEeCcceee-cCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee---------cC------CCeEEECCCCcc
Confidence 122222 22335678999999999995 6677899999977655211 11 124999999999
Q ss_pred CCeEEEEEEEeCCce-eEEEEEEEeecCCC
Q psy12803 443 DFDTYRCISKNEVDI-AKGSLILFESNAKT 471 (902)
Q Consensus 443 DsG~YtC~A~N~~G~-~~~s~~L~V~~~p~ 471 (902)
|+|.|+|.|.|..+. .+..+.|.|..+|.
T Consensus 145 d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 145 DSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred cCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 999999999997544 45668888887654
No 62
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.77 E-value=9.6e-19 Score=191.78 Aligned_cols=173 Identities=18% Similarity=0.284 Sum_probs=126.3
Q ss_pred cEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcc--ceeccCCcEEEEeeeeecCceeEEeecC----------
Q psy12803 300 PIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWK--DSAVASSTLNFTRINRINMGAYMCLADN---------- 367 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~--~~~~~~~sL~I~~Vt~~DsG~YtC~A~N---------- 367 (902)
.+.+.+|+++.|.|.+.+.|.+.+.|+|++..+....... .......+|.|.+++.+|+|.|+|.|.|
T Consensus 132 ~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 211 (334)
T 1ry7_B 132 LLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYT 211 (334)
T ss_dssp EEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEE
T ss_pred eEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEE
Confidence 4678999999999999999999999999876654332211 1223456899999999999999999998
Q ss_pred ----C----CCEEEE-cCceeeeecCceEEEEEEeeccCCceEEEEe----cCCeeeecCCceEEEeecC--CCceeeEe
Q psy12803 368 ----V----PPQILI-RNRRVGVPIGRTATLECEVEAFPLSVRYWEF----IDGTLIEHDGVKYSISDVD--KGSYQYIM 432 (902)
Q Consensus 368 ----~----~P~i~~-~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k----~~~~l~~~~~~~~~~~~~~--~~s~~~~s 432 (902)
. +|.+.. .+....+.+|+++.|.|.+.+.|.|.+.|++ ++..+.......+.+.... .......+
T Consensus 212 l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (334)
T 1ry7_B 212 LDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELE 291 (334)
T ss_dssp EEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCC
T ss_pred EEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCcccccccccc
Confidence 1 222222 2355678899999999999999999999998 4444432222111111110 00000123
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.+++.+|+|.|+|.|.|..|....++.|.|...++.
T Consensus 292 ~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 331 (334)
T 1ry7_B 292 VLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEE 331 (334)
T ss_dssp CEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCCC
T ss_pred EEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCCC
Confidence 5999999999999999999999999999999999876654
No 63
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.77 E-value=3e-19 Score=201.13 Aligned_cols=193 Identities=20% Similarity=0.313 Sum_probs=136.0
Q ss_pred cccccccccCCCCCCCCcccccCCcccCCceeecCCcEEEEcCCeEEEEEecC-CCCCCceEEecCCCcccccCCcccee
Q psy12803 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVAT-GHPKPSIIWKTSENKPITLGSWKDSA 342 (902)
Q Consensus 264 ~c~~kN~scs~~s~~~~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~-G~P~p~v~W~k~~~~~~~~~~~~~~~ 342 (902)
.|.+.|..+.+.+....+.+.+.+.+. ......+.+.+|+.+.|.|.+. +.|.+.+.|++++..+.. ...+...
T Consensus 79 ~C~A~N~~G~~~s~~~~l~v~~~~~~~----~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~-~~~~~~~ 153 (384)
T 3kld_A 79 QCIATNSFGTIVSREAKLQFAYLENFK----TRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQ-DNRRFVS 153 (384)
T ss_dssp EEEEEETTEEEECCCEEEEEEEECCCS----CCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCC-SSSEEEC
T ss_pred EEEEEcCcccEEecceEEEEecccccc----cCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEe-eccEEEE
Confidence 466666665544433333333333221 1123457899999999999865 467789999997755432 2223334
Q ss_pred ccCCcEEEEeeeeecCceeEEeecCC--------C----------------CEEEE-cCceeeeecCceEEEEEEeeccC
Q psy12803 343 VASSTLNFTRINRINMGAYMCLADNV--------P----------------PQILI-RNRRVGVPIGRTATLECEVEAFP 397 (902)
Q Consensus 343 ~~~~sL~I~~Vt~~DsG~YtC~A~N~--------~----------------P~i~~-~p~~~~v~~G~~v~L~C~a~g~P 397 (902)
..+++|.|.+++.+|+|.|+|.|.|. . |.+.. .+..+.+.+|+++.|.|.+.|.|
T Consensus 154 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P 233 (384)
T 3kld_A 154 QETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNP 233 (384)
T ss_dssp TTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEES
T ss_pred cCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecC
Confidence 45678999999999999999999881 1 11111 24456688999999999999999
Q ss_pred CceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 398 LSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 398 ~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.|.+.|+++++..+... .+. . ... .+|.|.+++.+|+|.|+|.|.|..|....+..|.|..+|.
T Consensus 234 ~p~i~W~k~~~~~~~~~-~~~--~-~~~------~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~ 297 (384)
T 3kld_A 234 VPTILWRRADGKPIARK-ARR--H-KSN------GILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPN 297 (384)
T ss_dssp CCEEEEEETTCCCCCTT-CEE--C-TTS------CEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred CCcEEEEeCCCcccccc-cee--c-CCC------cEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCc
Confidence 99999998766543321 111 1 112 2499999999999999999999999999999998877554
No 64
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.77 E-value=1.2e-18 Score=194.83 Aligned_cols=151 Identities=23% Similarity=0.346 Sum_probs=123.5
Q ss_pred CcEEEEcCCeEEEEEecCCCCCCceEEecCCCccccc---CCccceeccCCcEEEEeeeeecCceeEEeecC--------
Q psy12803 299 SPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITL---GSWKDSAVASSTLNFTRINRINMGAYMCLADN-------- 367 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~---~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-------- 367 (902)
....+.+|++++|.|.+.++|.+.|+|+|++...... .........+++|.|.+++.+|+|.|+|.|.|
T Consensus 220 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 299 (388)
T 2v5m_A 220 KPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVE 299 (388)
T ss_dssp CCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEE
Confidence 4467899999999999999999999999975433211 11112233467999999999999999999999
Q ss_pred ------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCC
Q psy12803 368 ------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNI 441 (902)
Q Consensus 368 ------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~ 441 (902)
.+|.+...+....+.+|+++.|.|.+.+.|.|.|.|++++..+... . ++|.|.+++.
T Consensus 300 ~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~-----------~------~~L~i~~v~~ 362 (388)
T 2v5m_A 300 TVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS-----------E------SVLRIESVKK 362 (388)
T ss_dssp EEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC-----------S------SEEEESSCCG
T ss_pred EEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccC-----------C------CEEEEecCCh
Confidence 4566666677788999999999999999999999999987655321 1 2499999999
Q ss_pred CCCeEEEEEEEeCCceeEEEEEEEe
Q psy12803 442 SDFDTYRCISKNEVDIAKGSLILFE 466 (902)
Q Consensus 442 ~DsG~YtC~A~N~~G~~~~s~~L~V 466 (902)
+|+|.|+|.|.|..|..++++.|.|
T Consensus 363 ~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 363 EDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred hhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 9999999999999999999999876
No 65
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.77 E-value=1.2e-18 Score=178.53 Aligned_cols=168 Identities=16% Similarity=0.286 Sum_probs=116.7
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCc-cc----------ccC-Cccceec---cCCcEEEEeeeeecCcee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENK-PI----------TLG-SWKDSAV---ASSTLNFTRINRINMGAY 361 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~-~~----------~~~-~~~~~~~---~~~sL~I~~Vt~~DsG~Y 361 (902)
.+..+.+.+|++|+|.|.+.+.|.+.|.|+|++.. .. ... ..+.... ...+|.|.+++.+|+|.|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (213)
T 3d9a_L 7 SPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMY 86 (213)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEE
Confidence 35678899999999999999999899999985421 11 000 1122221 223899999999999999
Q ss_pred EEeecC------------------CCCEEEEcCceeeeecCceEEEEEEeec-cCCc-eEEEEecCCeeeecCCceEEEe
Q psy12803 362 MCLADN------------------VPPQILIRNRRVGVPIGRTATLECEVEA-FPLS-VRYWEFIDGTLIEHDGVKYSIS 421 (902)
Q Consensus 362 tC~A~N------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P-~v~W~k~~~~l~~~~~~~~~~~ 421 (902)
+|.|.| .+|.+...+....+.+|+.++|.|.+.+ .|.+ .+.|++++..+...........
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 166 (213)
T 3d9a_L 87 FCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 166 (213)
T ss_dssp EEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCC
T ss_pred EEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCc
Confidence 999988 1444444333223347899999999987 5665 8999998766532201112222
Q ss_pred ecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 422 DVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 422 ~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
...++.+...++|.|.+++.+|+|.|+|.|.|..........+
T Consensus 167 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i 209 (213)
T 3d9a_L 167 DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSF 209 (213)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEEE
T ss_pred cCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEEEe
Confidence 2344455567789999999999999999999987765444333
No 66
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.76 E-value=2.4e-18 Score=175.12 Aligned_cols=161 Identities=21% Similarity=0.251 Sum_probs=117.0
Q ss_pred CcEEEEcCCeEEEEEecCCCCCCceEEecCCCccccc-----------------CCccceeccCCcEEEEeeeeecCcee
Q psy12803 299 SPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITL-----------------GSWKDSAVASSTLNFTRINRINMGAY 361 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~-----------------~~~~~~~~~~~sL~I~~Vt~~DsG~Y 361 (902)
.++.+.+|++++|.|.+.+.+.+.+.|+|++...... ...+.....+++|.|.+++.+|+|.|
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y 86 (208)
T 3r4d_A 7 VPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVY 86 (208)
T ss_dssp ESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEE
T ss_pred ccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEE
Confidence 3467899999999999888899999999865422110 11233344567899999999999999
Q ss_pred EEeecC------------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeec
Q psy12803 362 MCLADN------------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDV 423 (902)
Q Consensus 362 tC~A~N------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~ 423 (902)
+|.+.| ..|.+...... +.+|+++.|.|.+.+.| |.+.|++++..+... .++.+...
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~--~~~~~~~~ 161 (208)
T 3r4d_A 87 TLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLT--ERMTLSQN 161 (208)
T ss_dssp EEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCC--SSEEEETT
T ss_pred EEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCC--CCeEEcCC
Confidence 999988 12444433333 78899999999999977 899999977665432 23333221
Q ss_pred CCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeE-EEEEEEeecCCC
Q psy12803 424 DKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAK-GSLILFESNAKT 471 (902)
Q Consensus 424 ~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~-~s~~L~V~~~p~ 471 (902)
. .+|.|.+++.+|+|.|+|.|.|.+|... ..+.|.|..++.
T Consensus 162 -~------~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 162 -N------SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPH 203 (208)
T ss_dssp -T------TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC----
T ss_pred -C------CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCc
Confidence 1 2499999999999999999999999874 567777765543
No 67
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.76 E-value=3e-18 Score=176.45 Aligned_cols=168 Identities=18% Similarity=0.369 Sum_probs=118.4
Q ss_pred cEEEEcCCeEEEEEecCCCCC-----CceEEecCCCcccc-----------cCCccceec------cCCcEEEEeeeeec
Q psy12803 300 PIVVREGDNVRLRCVATGHPK-----PSIIWKTSENKPIT-----------LGSWKDSAV------ASSTLNFTRINRIN 357 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G~P~-----p~v~W~k~~~~~~~-----------~~~~~~~~~------~~~sL~I~~Vt~~D 357 (902)
.+.+.+|++++|.|.+.+.|. +.|.|+|++..... ....+.... .+.+|.|.+++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 456889999999999998764 78999998754311 111122222 25689999999999
Q ss_pred CceeEEeecC----------------CCCEEEEcCceeeeecCceEEEEEEe-eccCCceEEEEecCCeeeecCCceEEE
Q psy12803 358 MGAYMCLADN----------------VPPQILIRNRRVGVPIGRTATLECEV-EAFPLSVRYWEFIDGTLIEHDGVKYSI 420 (902)
Q Consensus 358 sG~YtC~A~N----------------~~P~i~~~p~~~~v~~G~~v~L~C~a-~g~P~P~v~W~k~~~~l~~~~~~~~~~ 420 (902)
+|.|+|.+.| ..|.+...+ ...+.+|+.++|.|.+ .+.|.|.+.|+++++..... ......
T Consensus 84 ~G~Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~-~~~~~~ 161 (222)
T 4i0k_A 84 EGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTG-NVTTSQ 161 (222)
T ss_dssp CSCEEEEEEECCCCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCS-EEEEEE
T ss_pred CEEEEEEEEeCCCceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCC-CcceeE
Confidence 9999999986 235555444 3457789999999999 89999999998855554332 122222
Q ss_pred eecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 421 SDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 421 ~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
.....+. .+.|.|.+++.+|+|.|+|.|.|..|....++.|.|..+|..
T Consensus 162 ~~~~~~~---~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 210 (222)
T 4i0k_A 162 MANERGL---FDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLT 210 (222)
T ss_dssp EECTTSC---EEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC----
T ss_pred EcCCCCe---EEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCccc
Confidence 2222222 345899999999999999999999999999999999876654
No 68
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.76 E-value=2.1e-18 Score=175.38 Aligned_cols=159 Identities=15% Similarity=0.138 Sum_probs=108.8
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCC------------
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNV------------ 368 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~------------ 368 (902)
..+.+|++|+|.|.+.+.|. .+.|+|++..+.............+.|.|.+++.+|+|.|+|.|.|.
T Consensus 14 ~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~ 92 (198)
T 1ugn_A 14 SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLE 92 (198)
T ss_dssp SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEE
T ss_pred CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEE
Confidence 47899999999999999775 79999987665322222222345678999999999999999999651
Q ss_pred --------CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccC
Q psy12803 369 --------PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVN 440 (902)
Q Consensus 369 --------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~ 440 (902)
+|.+...+ ...+.+|++++|.|.+.+. .+.+.|++++..+... ...+...... .....|.|.+++
T Consensus 93 l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~-~~~~~~~~~~----~~~~~L~i~~v~ 165 (198)
T 1ugn_A 93 LVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQ-CLNSQPHARG----SSRAIFSVGPVS 165 (198)
T ss_dssp EEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------C-EEEC----------CCEEEEEECCCC
T ss_pred EEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCc-cccccccCCC----cceeEEEecccC
Confidence 23333332 2568899999999999998 7899999988765321 1111111100 113469999999
Q ss_pred CCCCeEEEEEEEeCCcee-----EEEEEEEee
Q psy12803 441 ISDFDTYRCISKNEVDIA-----KGSLILFES 467 (902)
Q Consensus 441 ~~DsG~YtC~A~N~~G~~-----~~s~~L~V~ 467 (902)
.+|+|.|+|.|.|..+.. +..+.|.|.
T Consensus 166 ~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 166 PSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp TTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred cccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 999999999999986521 345555553
No 69
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.76 E-value=3.5e-18 Score=183.14 Aligned_cols=170 Identities=17% Similarity=0.274 Sum_probs=127.3
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCC--CceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-----
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPK--PSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~--p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
+..+..+.+.+|++++|.|.+.+ |. +.+.|+++++..+.... +.....+..|.|.+++.+|+|.|+|.|.|
T Consensus 93 ~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 170 (292)
T 4dkd_C 93 NVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHT-NYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKV 170 (292)
T ss_dssp EESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSC-CEECCSSSCCEETTCCGGGCSEEEEEECSTTSCE
T ss_pred cccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCC-cccccCCceEEECCCCHHHCeEEEEEEEeCCCce
Confidence 33456788999999999999998 54 78999997655543322 33344456799999999999999999997
Q ss_pred ----------C----CCEEEEcCceeeeecCceEEEEEEeeccCC-ceEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 368 ----------V----PPQILIRNRRVGVPIGRTATLECEVEAFPL-SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 368 ----------~----~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~-P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
. +|.+...+....+.+|+.+.|.|.+.+.|. +.+.|++++..+.......+. ...+...+
T Consensus 171 ~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-----~~~~~~~~ 245 (292)
T 4dkd_C 171 MSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFH-----NNRYQKVL 245 (292)
T ss_dssp ECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEE-----TTEEEEEE
T ss_pred eEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceec-----cceeeeEE
Confidence 2 777777777777789999999999998775 467887776655322221111 11123456
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.....
T Consensus 246 ~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~ 284 (292)
T 4dkd_C 246 TLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAG 284 (292)
T ss_dssp EEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC-----
T ss_pred EEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCCC
Confidence 799999999999999999999999999999999876543
No 70
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.76 E-value=8.5e-18 Score=165.83 Aligned_cols=145 Identities=19% Similarity=0.213 Sum_probs=111.5
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC-CCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC--------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP-KPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN-------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P-~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-------- 367 (902)
.+..+.+.+|++++|.|.+.+.| .+.+.|+|++..+.. ....|.|.+++.+|+|.|+|.+.|
T Consensus 10 ~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~---------~~~~~~~~~~~~~d~G~Y~C~~~~~~~s~~~~ 80 (170)
T 3ry4_A 10 EPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPT---------HTQPSYRFKANNNDSGEYTCQTGQTSLSDPVH 80 (170)
T ss_dssp ESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTT---------CCSSEEEEECCGGGCEEEEEEETTSBCCCCEE
T ss_pred CCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEccc---------CccceEEEecccccCeEEEEEEeCCCceEeEE
Confidence 45556789999999999999986 679999997654322 245688999999999999999998
Q ss_pred ----CCCEEEEcCceeeeecCceEEEEEEee-ccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCC
Q psy12803 368 ----VPPQILIRNRRVGVPIGRTATLECEVE-AFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNIS 442 (902)
Q Consensus 368 ----~~P~i~~~p~~~~v~~G~~v~L~C~a~-g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~ 442 (902)
.++.+.. .....+.+|+++.|.|.+. +.|.+.+.|++++..+.... .. ..|.|.+++.+
T Consensus 81 l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~---------~~------~~L~i~~v~~~ 144 (170)
T 3ry4_A 81 LTVLFEWLVLQ-TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSH---------LD------PTFSIPQANHS 144 (170)
T ss_dssp EEEECCSEEEE-CSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEES---------SC------CEEEESSCCGG
T ss_pred EEEECCceEec-CCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccC---------CC------CeEEEEecccc
Confidence 3333333 3345678999999999995 55779999998776553211 11 24999999999
Q ss_pred CCeEEEEEEEeCCce-eEEEEEEEe
Q psy12803 443 DFDTYRCISKNEVDI-AKGSLILFE 466 (902)
Q Consensus 443 DsG~YtC~A~N~~G~-~~~s~~L~V 466 (902)
|+|.|+|.|.|..|. .+..+.|.|
T Consensus 145 d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 145 HSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCEEEEEEEEeCcCccccccEEEEE
Confidence 999999999999997 355566655
No 71
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.76 E-value=8.1e-19 Score=196.90 Aligned_cols=193 Identities=24% Similarity=0.341 Sum_probs=137.5
Q ss_pred cccccccccCCCCCCCCcccccCCcccCCceeecCCcEEEEcCCeEEEEEec-CCCCCCceEEecCCCcccccCCcccee
Q psy12803 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVA-TGHPKPSIIWKTSENKPITLGSWKDSA 342 (902)
Q Consensus 264 ~c~~kN~scs~~s~~~~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a-~G~P~p~v~W~k~~~~~~~~~~~~~~~ 342 (902)
.|.+.|..+...+....+.+..+|.+.. ....+..+.+|++++|.|.+ .+.|.+.+.|++++...+... .+...
T Consensus 93 ~C~a~n~~g~~~s~~~~l~V~~~p~~~~----~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~-~~~~~ 167 (404)
T 3p3y_A 93 QCFARNKFGTALSNRIRLQVSKSPLWPK----ENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQD-KRVSQ 167 (404)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCCCCCC----CCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCC-SSEEE
T ss_pred EEEEEcCCCeEeeeeEEEEEeccCcccc----CCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCC-CcEEE
Confidence 4555555444332233334444443321 12345789999999999999 788999999999876554332 34445
Q ss_pred ccCCcEEEEeeeeec-CceeEEeecCC------------------------CCEEEEc---CceeeeecCceEEEEEEee
Q psy12803 343 VASSTLNFTRINRIN-MGAYMCLADNV------------------------PPQILIR---NRRVGVPIGRTATLECEVE 394 (902)
Q Consensus 343 ~~~~sL~I~~Vt~~D-sG~YtC~A~N~------------------------~P~i~~~---p~~~~v~~G~~v~L~C~a~ 394 (902)
..+++|.|.+++.+| +|.|+|.|.|. +|.+... +....+.+|+++.|.|.+.
T Consensus 168 ~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~ 247 (404)
T 3p3y_A 168 GHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIAS 247 (404)
T ss_dssp CTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBC
T ss_pred cCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEEC
Confidence 567799999999999 59999999870 1111111 1235688999999999999
Q ss_pred ccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 395 AFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 395 g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
+.|.+.+.|++++..+... ...+. ... ++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.
T Consensus 248 g~p~~~v~W~~~~~~~~~~-~~~~~---~~~------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 314 (404)
T 3p3y_A 248 GVPTPDIAWYKKGGDLPSD-KAKFE---NFN------KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPY 314 (404)
T ss_dssp CSSCCEEEEEETTBCCCTT-TEEEE---GGG------TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEE
T ss_pred CCCCCcEEEEECCEECCCC-ccccc---ccC------ceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCe
Confidence 9999999999988766432 22211 111 2499999999999999999999999999999999987653
No 72
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.76 E-value=8.9e-18 Score=172.71 Aligned_cols=170 Identities=15% Similarity=0.263 Sum_probs=112.8
Q ss_pred CCcEEEEcCCeEEEEEecCCCCC-----CceEEecCCCccccc-------------CCccceec------cCCcEEEEee
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPK-----PSIIWKTSENKPITL-------------GSWKDSAV------ASSTLNFTRI 353 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~-----p~v~W~k~~~~~~~~-------------~~~~~~~~------~~~sL~I~~V 353 (902)
+..+.+.+|++++|.|.+.+.|. +.|.|+|++..+... ...+.... .+.+|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 34578999999999999987763 489999975221110 00111111 2248999999
Q ss_pred eeecCceeEEeecCCC-----CEEEE--cC------ceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEE
Q psy12803 354 NRINMGAYMCLADNVP-----PQILI--RN------RRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSI 420 (902)
Q Consensus 354 t~~DsG~YtC~A~N~~-----P~i~~--~p------~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~ 420 (902)
+.+|+|.|+|.|.|.. -.+.+ .+ ....+.+|+.++|.|.+.|.|.|.|.|+++++..+... .....
T Consensus 88 ~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~-~~~~~ 166 (222)
T 3sbw_C 88 KLQDAGVYRCMISYGGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGK-TTTTN 166 (222)
T ss_dssp CGGGCEEEEEEEESSSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCE-EEEEE
T ss_pred ccccCeEEEEEEEeCCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCc-cceEE
Confidence 9999999999999810 00111 11 11246789999999999999999999999855544321 22222
Q ss_pred eecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 421 SDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 421 ~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.....+.+...+.|.| +.+|+|.|+|.|.|..|....++.|.|...+.
T Consensus 167 ~~~~~~~~~~~~~l~v---~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 167 SKREEKLFNVTSTLRI---NTTTNEIFYCTFRRLDPEENHTAELVIPELPL 214 (222)
T ss_dssp CC----CEEEEEEEEE---ECCTTCEEEEEEEETTTTEEEEEEEECCCC--
T ss_pred EcCCCCCEEEEEEEEE---eccCCcEEEEEEEeCccceeeEEEEEecCCcc
Confidence 2333344334444444 57899999999999999999999999886554
No 73
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.76 E-value=1.3e-18 Score=182.25 Aligned_cols=169 Identities=20% Similarity=0.221 Sum_probs=115.1
Q ss_pred CCcEEEEcCCeEEEEEecCC---CCCCceEEecCCCccc----c------------------------cCCccceec--c
Q psy12803 298 SSPIVVREGDNVRLRCVATG---HPKPSIIWKTSENKPI----T------------------------LGSWKDSAV--A 344 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G---~P~p~v~W~k~~~~~~----~------------------------~~~~~~~~~--~ 344 (902)
+.++.+.+|++|+|.|.+.+ .|.+.|.|+|++.... . ....+.... .
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 88 (250)
T 2fbo_J 9 HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLA 88 (250)
T ss_dssp CSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTT
T ss_pred CCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCC
Confidence 34688999999999999987 7889999999764320 0 001111111 2
Q ss_pred CCcEEEEeeeeecCceeEEeecCC----------------------CCEEEE-cCceeeeecCceEEEEEEeeccCCceE
Q psy12803 345 SSTLNFTRINRINMGAYMCLADNV----------------------PPQILI-RNRRVGVPIGRTATLECEVEAFPLSVR 401 (902)
Q Consensus 345 ~~sL~I~~Vt~~DsG~YtC~A~N~----------------------~P~i~~-~p~~~~v~~G~~v~L~C~a~g~P~P~v 401 (902)
+.+|.|.+++.+|+|.|+|.|.|. ++.+.. .+..+.+.+|+++.|.|.+.+.|.|.|
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v 168 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANV 168 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEE
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCee
Confidence 358999999999999999999881 122222 123455667999999999999999999
Q ss_pred EEEecCCeeeecCCceEEEe------------ecCCCcee--eEeEEEEeccCCCCCeEEEEEEEe---CCceeEEEEEE
Q psy12803 402 YWEFIDGTLIEHDGVKYSIS------------DVDKGSYQ--YIMQLNISNVNISDFDTYRCISKN---EVDIAKGSLIL 464 (902)
Q Consensus 402 ~W~k~~~~l~~~~~~~~~~~------------~~~~~s~~--~~stL~I~~V~~~DsG~YtC~A~N---~~G~~~~s~~L 464 (902)
.|++++..+........... ........ ...+|.|.+++.+|+|.|+|.|.| ..|....++.|
T Consensus 169 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l 248 (250)
T 2fbo_J 169 TWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTIL 248 (250)
T ss_dssp EEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEE
T ss_pred EEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeEEE
Confidence 99998765533221111100 00000000 114699999999999999999999 55666777776
Q ss_pred Ee
Q psy12803 465 FE 466 (902)
Q Consensus 465 ~V 466 (902)
.|
T Consensus 249 ~V 250 (250)
T 2fbo_J 249 KV 250 (250)
T ss_dssp EC
T ss_pred eC
Confidence 54
No 74
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.76 E-value=2.9e-18 Score=188.69 Aligned_cols=161 Identities=21% Similarity=0.222 Sum_probs=121.7
Q ss_pred EEEcCCeEEEEEecCCCC-CCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCC------------
Q psy12803 302 VVREGDNVRLRCVATGHP-KPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNV------------ 368 (902)
Q Consensus 302 ~v~eGe~v~L~C~a~G~P-~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~------------ 368 (902)
.+.+|+++.|.|.+.+.| .+.+.|+|++..+.. ...+.. ..++.|.|.+++.+|+|.|+|.|.|.
T Consensus 139 ~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~-~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~ 216 (329)
T 3oq3_B 139 GTHDKYGIDLYCGILYAKHYNNITWYKNNQELII-DGTKYS-QSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSR 216 (329)
T ss_dssp TSSTTTCEEEECCCCSCCCCCEEEEEETTEECCC-SSSSEE-EETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEE
T ss_pred EEeCCCcEEEEeccCCCCCCceEEEEECCccCCC-CCceEe-cCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEe
Confidence 356799999999999999 999999998766532 222222 23689999999999999999999841
Q ss_pred --------CC---EEEEcCceeeeecCceEEEEEEeeccC---Cc-eEEEEecCCeeeecCCceEEEeecCCCceeeEeE
Q psy12803 369 --------PP---QILIRNRRVGVPIGRTATLECEVEAFP---LS-VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQ 433 (902)
Q Consensus 369 --------~P---~i~~~p~~~~v~~G~~v~L~C~a~g~P---~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~st 433 (902)
+| ...+.+..+.+.+|++++|.|.+.+.| .+ .+.|++++..+.......+.... .... ...++
T Consensus 217 ~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~-~~~~-~~~~~ 294 (329)
T 3oq3_B 217 CKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILT-SSGG-ITEAT 294 (329)
T ss_dssp EEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEE-EETT-EEEEE
T ss_pred eEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeec-ccCc-eeEeE
Confidence 11 011145557788999999999999998 77 88999988875433332222111 1111 24667
Q ss_pred EEEeccCCCCCe-EEEEEEEeCCceeEEEEEEEe
Q psy12803 434 LNISNVNISDFD-TYRCISKNEVDIAKGSLILFE 466 (902)
Q Consensus 434 L~I~~V~~~DsG-~YtC~A~N~~G~~~~s~~L~V 466 (902)
|.|.+++.+|+| .|+|.|.|..|....++.|.|
T Consensus 295 L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 295 LYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 999999999999 999999999999999988876
No 75
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.75 E-value=2.5e-18 Score=189.11 Aligned_cols=168 Identities=17% Similarity=0.217 Sum_probs=126.5
Q ss_pred eecCCcEEEEcCCeEEEEEecC-------CCCCCceEEecCCCcccccCC-ccceeccCCcEEEEeeeeecCceeEEeec
Q psy12803 295 IFSSSPIVVREGDNVRLRCVAT-------GHPKPSIIWKTSENKPITLGS-WKDSAVASSTLNFTRINRINMGAYMCLAD 366 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~-------G~P~p~v~W~k~~~~~~~~~~-~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~ 366 (902)
...+.++.+.+|++++|.|.+. +.|.+.|.|+|++..+..... .......+++|.|.+++.+|+|.|+|.|.
T Consensus 22 ~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 101 (339)
T 3o4o_C 22 GRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTR 101 (339)
T ss_dssp EECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEEECCEE
T ss_pred CcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEEEEEEE
Confidence 3456778999999999999998 899999999998876422222 33344567799999999999999999999
Q ss_pred CCC------CEEEE--c--------CceeeeecCceEEEEEE-----eeccCCceEEEEecCCeeeecCCceEEEeecCC
Q psy12803 367 NVP------PQILI--R--------NRRVGVPIGRTATLECE-----VEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDK 425 (902)
Q Consensus 367 N~~------P~i~~--~--------p~~~~v~~G~~v~L~C~-----a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~ 425 (902)
|.. -.+.+ . .....+.+|+++.|.|. +.+.|.+.+.|++++..+.. ...++.... ..
T Consensus 102 n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~-~~~~~~~~~-~~ 179 (339)
T 3o4o_C 102 NASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDK-DNEKFLSVR-GT 179 (339)
T ss_dssp ETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCT-TCSSEEECT-TS
T ss_pred CCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCC-CCceeEEcC-Cc
Confidence 811 11111 1 12346789999999999 78999999999998776643 323333322 11
Q ss_pred CceeeEeEEEEeccCCCCCeEEEEEEEeCCc----eeEEEEEEEeecCC
Q psy12803 426 GSYQYIMQLNISNVNISDFDTYRCISKNEVD----IAKGSLILFESNAK 470 (902)
Q Consensus 426 ~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G----~~~~s~~L~V~~~p 470 (902)
.+|.|.+++.+|+|.|+|.|.|..| .....+.|.|...+
T Consensus 180 ------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~ 222 (339)
T 3o4o_C 180 ------THLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKK 222 (339)
T ss_dssp ------SEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCC
T ss_pred ------ceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCC
Confidence 2499999999999999999999987 56778888887643
No 76
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.75 E-value=3.2e-18 Score=175.32 Aligned_cols=161 Identities=14% Similarity=0.254 Sum_probs=112.4
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCC--cc--cc--------cCCccceec---cCCcEEEEeeeeecCceeE
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN--KP--IT--------LGSWKDSAV---ASSTLNFTRINRINMGAYM 362 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~--~~--~~--------~~~~~~~~~---~~~sL~I~~Vt~~DsG~Yt 362 (902)
+.++.+.+|++|+|.|.+.+.|.+.|.|+|++. .+ +. ....+.... ...+|.|.+++.+|+|.|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 566889999999999999999889999998532 11 00 001111111 2238999999999999999
Q ss_pred EeecCC------------------CCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCeeeecCCceEEEee
Q psy12803 363 CLADNV------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGTLIEHDGVKYSISD 422 (902)
Q Consensus 363 C~A~N~------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~l~~~~~~~~~~~~ 422 (902)
|.|.|. +|.+...+....+.+|+.++|.|.+.+. |.+ .|.|++++..+............
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 166 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQD 166 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCcc
Confidence 999881 3444432222223469999999999974 554 89999987665321011112223
Q ss_pred cCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee
Q psy12803 423 VDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA 458 (902)
Q Consensus 423 ~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~ 458 (902)
..++.+...++|.|.++..+|+|.|+|.|.|.....
T Consensus 167 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 167 SKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 345566677889999999999999999999987644
No 77
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.75 E-value=3.4e-18 Score=172.32 Aligned_cols=133 Identities=20% Similarity=0.177 Sum_probs=103.3
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-------------
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------------- 367 (902)
..+.+|++|+|.|.+.+ +.+.+.|+|++.. ....++.|.|.+++.+|+|.|+|.|.|
T Consensus 17 ~~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~---------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l 86 (184)
T 2gi7_A 17 SLVPLEKPVTLRCQGPP-GVDLYRLEKLSSS---------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLEL 86 (184)
T ss_dssp SEEETTCCEEEEEECST-TCSEEEEEETTTC---------CEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEE
T ss_pred ccccCCCcEEEEEeCCC-CCCEEEEEECCcc---------ccCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEE
Confidence 37899999999999998 7889999997754 234567899999999999999999987
Q ss_pred ------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCC
Q psy12803 368 ------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNI 441 (902)
Q Consensus 368 ------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~ 441 (902)
.+|.+...+ ...+.+|++++|.|.+.+.| +.+.|++++..+..... . .....+|.|.+++.
T Consensus 87 ~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~--~---------~~~~~~L~i~~v~~ 153 (184)
T 2gi7_A 87 VATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNP--E---------RWYRASFPIITVTA 153 (184)
T ss_dssp EEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCC--C---------EEEEESSSEEEETT
T ss_pred EecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceec--C---------CCceEEEEEccCCc
Confidence 133444433 34577899999999987765 69999998866533111 0 11223499999999
Q ss_pred CCCeEEEEEEEeCCc
Q psy12803 442 SDFDTYRCISKNEVD 456 (902)
Q Consensus 442 ~DsG~YtC~A~N~~G 456 (902)
+|+|.|+|.|.|..+
T Consensus 154 ~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 154 AHSGTYRCYSFSSRD 168 (184)
T ss_dssp CCSEEEEEEEECTTS
T ss_pred cCCeEEEEEEEeCCC
Confidence 999999999999754
No 78
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.75 E-value=8.6e-18 Score=172.65 Aligned_cols=165 Identities=19% Similarity=0.228 Sum_probs=113.8
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-------------
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------------- 367 (902)
+.+.+|++++|.|.+.|.|.|.|.|++.....+. ..........+|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V 88 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--GKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEI 88 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--SEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--ceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEE
Confidence 4456999999999999999999999984332211 1111112335799999999999999999998
Q ss_pred -CCC-EEEEcCceeeeecCceEEEEEEeecc-CC--ceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCC
Q psy12803 368 -VPP-QILIRNRRVGVPIGRTATLECEVEAF-PL--SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNIS 442 (902)
Q Consensus 368 -~~P-~i~~~p~~~~v~~G~~v~L~C~a~g~-P~--P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~ 442 (902)
.+| .+.+.+. ..+.+|+.++|.|.+.+. |. ++|.|++++..+.... +.............++|.|..+..+
T Consensus 89 ~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~---~~~~~~~~~~~~~~~~l~i~~~~~d 164 (202)
T 1vca_A 89 YSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQE---FLEDADRKSLETKSLEVTFTPVIED 164 (202)
T ss_dssp EBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEE---CCSCCSSCCCEEEEEEEEECCCGGG
T ss_pred EeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccc---cccccCcCcceEEEEEEEEEeeecc
Confidence 122 1222222 458899999999999986 43 3799999886654321 0000001111334567889999999
Q ss_pred CCeEEEEEEEeCCce-------eEEEEEEEeecCCC
Q psy12803 443 DFDTYRCISKNEVDI-------AKGSLILFESNAKT 471 (902)
Q Consensus 443 DsG~YtC~A~N~~G~-------~~~s~~L~V~~~p~ 471 (902)
|.|.|+|.|.|.++. .+.++.|.|..+|.
T Consensus 165 ~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 165 IGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp TTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred CCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 999999999999875 45678888876653
No 79
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.75 E-value=5.4e-18 Score=183.23 Aligned_cols=158 Identities=15% Similarity=0.162 Sum_probs=121.4
Q ss_pred cEEEEcCCeEEEEEecC-CCCCCceEEecCCCcccccCCccceecc-C--CcEEEEeeeeecCceeEEeecCC-------
Q psy12803 300 PIVVREGDNVRLRCVAT-GHPKPSIIWKTSENKPITLGSWKDSAVA-S--STLNFTRINRINMGAYMCLADNV------- 368 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~-G~P~p~v~W~k~~~~~~~~~~~~~~~~~-~--~sL~I~~Vt~~DsG~YtC~A~N~------- 368 (902)
...+.+|+++.|.|.+. +.|.+.+.|+|++..+............ . .+|.|.+++.+|+|.|+|.|.|.
T Consensus 116 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 195 (312)
T 2y23_A 116 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHST 195 (312)
T ss_dssp EEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEE
T ss_pred ceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEE
Confidence 67899999999999999 8999999999987665433222222111 1 24999999999999999988761
Q ss_pred --------------------------CCEEEEcCceeeeecCceEEEEEEeeccCCc-eEEEEecCCeeeecCCceEEEe
Q psy12803 369 --------------------------PPQILIRNRRVGVPIGRTATLECEVEAFPLS-VRYWEFIDGTLIEHDGVKYSIS 421 (902)
Q Consensus 369 --------------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P-~v~W~k~~~~l~~~~~~~~~~~ 421 (902)
+|.|.... ...+.+|+.+.|.|.+.+.|.| .+.|++++..+.......+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~-- 272 (312)
T 2y23_A 196 VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK-- 272 (312)
T ss_dssp EEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-EEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC-----
T ss_pred EEEcchhhhhhcccccccccchhhccCCceeecc-eEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE--
Confidence 14444322 3678899999999999999988 99999988777543332221
Q ss_pred ecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 422 DVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 422 ~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
. ..++|.|.+++.+|+|.|+|.|.|..|...+++.|.|.
T Consensus 273 ---~----~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 273 ---D----GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp --------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred ---C----CEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 1 12469999999999999999999999999999998764
No 80
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.75 E-value=3.2e-18 Score=178.18 Aligned_cols=156 Identities=13% Similarity=0.150 Sum_probs=111.4
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCC--cEEEEeeeeecCceeEEeecC-----------
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASS--TLNFTRINRINMGAYMCLADN----------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~--sL~I~~Vt~~DsG~YtC~A~N----------- 367 (902)
..+.+|++|+|.|.+.+ +.+.+.|+|++..+.............. +|.|.+++.+|+|.|+|.|.|
T Consensus 18 ~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~ 96 (218)
T 1uct_A 18 PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTL 96 (218)
T ss_dssp SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCE
T ss_pred CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCE
Confidence 46899999999999988 6789999998766432211101112344 899999999999999999987
Q ss_pred --------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEecc
Q psy12803 368 --------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 368 --------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V 439 (902)
.+|.+...+ ...+.+|++++|.|.+.+.|.+.+.|++++..+.. . . . .... ...|.|.+|
T Consensus 97 ~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~--~-~-~-~~~~------~~~L~I~~v 164 (218)
T 1uct_A 97 ELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLP--Q-H-Q-SGEH------PANFSLGPV 164 (218)
T ss_dssp EEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCC--S-E-E-ECSS------SEEEECCSC
T ss_pred EEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccc--c-c-c-CCCc------cCEEEEccC
Confidence 134444444 35688999999999877888899999998865532 1 1 1 1111 235999999
Q ss_pred CCCCCeEEEEEEEeCCc-----eeEEEEEEEeecC
Q psy12803 440 NISDFDTYRCISKNEVD-----IAKGSLILFESNA 469 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~G-----~~~~s~~L~V~~~ 469 (902)
+.+|+|.|+|.|.|... ..+..+.|.|...
T Consensus 165 ~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 165 DLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp CGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred CcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 99999999999998642 2345567777654
No 81
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.75 E-value=5.3e-18 Score=178.48 Aligned_cols=151 Identities=16% Similarity=0.175 Sum_probs=120.3
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCC-ceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-------
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKP-SIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------- 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p-~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------- 367 (902)
..+..+.+.+|+++.|.|.+.+.|.+ .++|+|++..+.. .+.+|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~---------~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~ 76 (262)
T 3rjd_A 6 LQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQT---------STPSYRITSASVNDSGEYRCQRGLSGRSDPI 76 (262)
T ss_dssp ESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSC---------CSSEEEESSCCGGGCEEEEEEESSSCCCCCE
T ss_pred cCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeec---------cCCeEEEecCCcccCeEEEEEEecCCccccE
Confidence 34566789999999999999998888 9999997654321 256899999999999999999998
Q ss_pred ----CCCEEEEcCceeeeecCceEEEEEEe-eccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCC
Q psy12803 368 ----VPPQILIRNRRVGVPIGRTATLECEV-EAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNIS 442 (902)
Q Consensus 368 ----~~P~i~~~p~~~~v~~G~~v~L~C~a-~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~ 442 (902)
..+.+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ... ..|.|.+++.+
T Consensus 77 ~l~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~---------~~~------~~l~i~~~~~~ 141 (262)
T 3rjd_A 77 QLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF---------HWN------SNLTILKTNIS 141 (262)
T ss_dssp EEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE---------EEC------CCEEESSCCGG
T ss_pred EEEEeccceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc---------CCC------CeEEEEECChh
Confidence 11222333445668899999999999 77888999999877665321 011 23999999999
Q ss_pred CCeEEEEEEEeCCceeEEEEEEEeecCC
Q psy12803 443 DFDTYRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 443 DsG~YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
|+|.|+|.|.|..+..+..+.|.|....
T Consensus 142 d~G~Y~C~~~n~~~~~~~~~~l~V~~~~ 169 (262)
T 3rjd_A 142 HNGTYHCSGMGKHRYTSAGISVTVKELF 169 (262)
T ss_dssp GCEEEEEEEESSSEEEEECEEEEEECSS
T ss_pred hCEEEEEEEeCCCCccccceEEEeccCC
Confidence 9999999999999988898999988653
No 82
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.75 E-value=2.7e-18 Score=175.93 Aligned_cols=163 Identities=16% Similarity=0.209 Sum_probs=113.7
Q ss_pred cEEEEcCCeEEEEEecCCCCCCceEEecCC--Ccccc--c--------CCccce---eccCCcEEEEeeeeecCceeEEe
Q psy12803 300 PIVVREGDNVRLRCVATGHPKPSIIWKTSE--NKPIT--L--------GSWKDS---AVASSTLNFTRINRINMGAYMCL 364 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~--~~~~~--~--------~~~~~~---~~~~~sL~I~~Vt~~DsG~YtC~ 364 (902)
.+.+.+|++|+|.|.+.+.|.+.|.|+|.. ..+.. . ...+.. ...+.+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 578999999999999999999999999832 21110 0 011111 12334799999999999999999
Q ss_pred ecCC---------------------CCEEEEcCceeeeecCceEEEEEEeecc-CC-ceEEEEecCCeeeecCCceEEEe
Q psy12803 365 ADNV---------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PL-SVRYWEFIDGTLIEHDGVKYSIS 421 (902)
Q Consensus 365 A~N~---------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k~~~~l~~~~~~~~~~~ 421 (902)
|.|. +|.+...+....+.+|+.++|.|.+.+. |+ +.|.|++++..+.... ......
T Consensus 89 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~-~~~~~~ 167 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGV-KTTQPS 167 (213)
T ss_dssp EEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTE-EECCCE
T ss_pred eccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCc-ccCCcC
Confidence 9871 2333333333333479999999999986 44 4999999876663211 110111
Q ss_pred ecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 422 DVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 422 ~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
. ..+.+...++|.|.++..+|+|.|+|.|.|..+....++.+
T Consensus 168 ~-~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 209 (213)
T 3mj8_L 168 K-SDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLSP 209 (213)
T ss_dssp E-ETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEECC
T ss_pred c-cCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeecc
Confidence 1 33445566789999999999999999999999877766543
No 83
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=7.7e-19 Score=192.53 Aligned_cols=168 Identities=18% Similarity=0.253 Sum_probs=69.2
Q ss_pred eecCCcEEEEcCCeEEEEEecCCC-CCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCC-----
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGH-PKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNV----- 368 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~-P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~----- 368 (902)
+..+.++.+.+|++++|.|.+.+. |.+.+.|+|++..+.... .....+++|.|.+++.+|+|.|+|.|.|.
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~---~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~ 88 (334)
T 1ry7_B 12 PGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSE---RVLVGPQRLQVLNASHEDSGAYSCRQRLTQRVLC 88 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcc---cEEeccceEEEeecccccCEEEEEEEEeCCeEEE
Confidence 334667889999999999999986 678999999876653322 22235679999999999999999999871
Q ss_pred ------------------------------CCEEEEc----CceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecC
Q psy12803 369 ------------------------------PPQILIR----NRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHD 414 (902)
Q Consensus 369 ------------------------------~P~i~~~----p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~ 414 (902)
+|.+... ...+.+.+|+++.|.|.+.+.|.+.+.|++++..+....
T Consensus 89 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~ 168 (334)
T 1ry7_B 89 HFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEH 168 (334)
T ss_dssp ------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTS
T ss_pred EEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccc
Confidence 1211111 123567899999999999999999999999877664322
Q ss_pred CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 415 GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 415 ~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.......... ..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+.
T Consensus 169 ~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 219 (334)
T 1ry7_B 169 RIGGIKLRHQ------QWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSP 219 (334)
T ss_dssp STTCCCCCTT------TTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred cccceecccc------eEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCC
Confidence 1110001111 13499999999999999999999999999999999987543
No 84
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.75 E-value=1.1e-17 Score=181.10 Aligned_cols=163 Identities=15% Similarity=0.170 Sum_probs=122.0
Q ss_pred EEEEcCCeEEEEEecCC----------CCCCceEEecCCCcccccCCccceecc-CCcEEEEeeeeecCceeEEeecCC-
Q psy12803 301 IVVREGDNVRLRCVATG----------HPKPSIIWKTSENKPITLGSWKDSAVA-SSTLNFTRINRINMGAYMCLADNV- 368 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G----------~P~p~v~W~k~~~~~~~~~~~~~~~~~-~~sL~I~~Vt~~DsG~YtC~A~N~- 368 (902)
..+.+|+.+.|.|.+.+ .|.+.+.|+|++..+............ ...|.|.+++.+|+|.|+|.|.|.
T Consensus 108 ~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 187 (317)
T 2y25_A 108 KIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGK 187 (317)
T ss_dssp HHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSS
T ss_pred eecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCC
Confidence 34556777777777766 789999999988765433221111111 135999999999999999999981
Q ss_pred ---------------------------------CCEEEE-cCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecC
Q psy12803 369 ---------------------------------PPQILI-RNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHD 414 (902)
Q Consensus 369 ---------------------------------~P~i~~-~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~ 414 (902)
.|.+.. .+..+.+.+|+.+.|.|.+.+.|.|.+.|++++..+....
T Consensus 188 g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~ 267 (317)
T 2y25_A 188 TGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDD 267 (317)
T ss_dssp CEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCS
T ss_pred ceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCC
Confidence 233333 3456788999999999999999999999999988775433
Q ss_pred CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecC
Q psy12803 415 GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 415 ~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~ 469 (902)
++.+.... + ..++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 268 --~~~~~~~~-~---~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 268 --HCNLKFEA-G---RTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 316 (317)
T ss_dssp --SEEECCBT-T---TEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred --cEEEEEcC-C---CEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEcC
Confidence 33333221 1 1246999999999999999999999999999999998743
No 85
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.74 E-value=6.8e-18 Score=174.44 Aligned_cols=170 Identities=12% Similarity=0.115 Sum_probs=122.1
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCC-CceEEecCCCccc----c-----cC--Cccce----------eccCCcEEEEeee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPK-PSIIWKTSENKPI----T-----LG--SWKDS----------AVASSTLNFTRIN 354 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~-p~v~W~k~~~~~~----~-----~~--~~~~~----------~~~~~sL~I~~Vt 354 (902)
.+.++.+.+|+++.|.|.+.+.|. +.+.|+|++.... . .. ..+.. ...++.|.|.+++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 456688999999999999999885 8999998665422 0 00 11122 3445679999999
Q ss_pred eecCceeEEeecC------------------CCCEEEEcCceeeeecCceE-EEEEEe-eccCCceEEEEecCCeeeecC
Q psy12803 355 RINMGAYMCLADN------------------VPPQILIRNRRVGVPIGRTA-TLECEV-EAFPLSVRYWEFIDGTLIEHD 414 (902)
Q Consensus 355 ~~DsG~YtC~A~N------------------~~P~i~~~p~~~~v~~G~~v-~L~C~a-~g~P~P~v~W~k~~~~l~~~~ 414 (902)
.+|+|.|+|.|.| ..|.+...+..+.+.+|+.+ .|.|.+ .+.|.|.+.|++++..+....
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~ 165 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPV 165 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCS
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcccc
Confidence 9999999999987 22455555555667789988 999999 899999999999887665433
Q ss_pred --CceEEE----eecCCCceeeEeEEEEeccCCCCCeEEEEEEEe-----CCce-eEEEEEEEe
Q psy12803 415 --GVKYSI----SDVDKGSYQYIMQLNISNVNISDFDTYRCISKN-----EVDI-AKGSLILFE 466 (902)
Q Consensus 415 --~~~~~~----~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N-----~~G~-~~~s~~L~V 466 (902)
..++.+ .....+.+...++|.|.....+|+|.|+|.|.| ..|. .+..+.|.|
T Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 166 EMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp SCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred ccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 012222 123445566667899986666679999999999 4555 445555544
No 86
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.74 E-value=3.1e-18 Score=191.35 Aligned_cols=191 Identities=18% Similarity=0.251 Sum_probs=136.6
Q ss_pred cccccccccCCCCCCCCcccccCCcccCCceeecCCcEEEEcCCeEEEEEecC-CCCCCceEEecCCCcccccCCcc-ce
Q psy12803 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVAT-GHPKPSIIWKTSENKPITLGSWK-DS 341 (902)
Q Consensus 264 ~c~~kN~scs~~s~~~~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~-G~P~p~v~W~k~~~~~~~~~~~~-~~ 341 (902)
.|.+.|..+...+....+.+.+.+.+. ......+.+.+|++++|.|.+. +.|.+.+.|+|++..+......+ ..
T Consensus 78 ~C~a~n~~g~~~s~~~~l~v~~~~~~~----~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~ 153 (382)
T 1cs6_A 78 QCVATNARGTVVSREASLRFGFLQEFS----AEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFV 153 (382)
T ss_dssp EEEEEETTEEEECCCEEEEEEEECCCC----SSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEE
T ss_pred EEEEEcCCcEEEecceEEEeecccccc----ccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEE
Confidence 455555444333333333444333332 1234568899999999999964 57889999999876643222222 23
Q ss_pred eccCCcEEEEeeeeecCceeEEeecC-C------------------------CCEEEE-cCceeeeecCceEEEEEEeec
Q psy12803 342 AVASSTLNFTRINRINMGAYMCLADN-V------------------------PPQILI-RNRRVGVPIGRTATLECEVEA 395 (902)
Q Consensus 342 ~~~~~sL~I~~Vt~~DsG~YtC~A~N-~------------------------~P~i~~-~p~~~~v~~G~~v~L~C~a~g 395 (902)
...+++|.|.+++.+|+|.|+|.|.| . +|.+.. .+....+.+|+.+.|.|.+.+
T Consensus 154 ~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g 233 (382)
T 1cs6_A 154 SQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFG 233 (382)
T ss_dssp CTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEE
T ss_pred ecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEcc
Confidence 33457899999999999999999987 1 233333 244677889999999999999
Q ss_pred cCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 396 FPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 396 ~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.|.|.+.|++++..+.. . .... ..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.
T Consensus 234 ~p~~~i~W~~~~~~~~~--~-----~~~~------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 296 (382)
T 1cs6_A 234 NPVPQIKWRKLDGSQTS--K-----WLSS------EPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPD 296 (382)
T ss_dssp ESCCEEEEEECCSCCSC--C-----CSBS------SSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred CCCCEEEEEECCccccc--E-----EecC------CcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCC
Confidence 99999999998876432 0 0111 23499999999999999999999999999999999887654
No 87
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.74 E-value=2.4e-17 Score=192.85 Aligned_cols=173 Identities=15% Similarity=0.203 Sum_probs=133.3
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCc-eeEEeecC--------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMG-AYMCLADN-------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG-~YtC~A~N-------- 367 (902)
.+.++.+.+|++++|.|.+.+.|.+.|+|+|.++..+... .+.....++.|.|.+++.+|+| .|+|.|.|
T Consensus 120 ~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~-~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~ 198 (524)
T 2ec8_A 120 VDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKD-LRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSE 198 (524)
T ss_dssp CCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSS-CEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCC
T ss_pred cccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCC-CceeECCCccEEEeccchhhCCceEEEEEEECCceEEEE
Confidence 4556778999999999999997779999998555544322 2344455779999999999999 99999987
Q ss_pred -----------CCCEEEEcCceeeeecCceEEEEEEeeccCCce-EEEEecCCeeeecCCceEEEeecCCCceeeEeEEE
Q psy12803 368 -----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSV-RYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLN 435 (902)
Q Consensus 368 -----------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~-v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~ 435 (902)
.+|.+...+....+.+|+++.|.|.+.+.|.|. +.|++++..+.........+ .........++|.
T Consensus 199 ~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~ 276 (524)
T 2ec8_A 199 KFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWH--HGDFNYERQATLT 276 (524)
T ss_dssp CEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEE--CSSSCEEEEEEEE
T ss_pred EEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCcccccccccc--ccCCccceEEEEE
Confidence 346676777777899999999999999999887 99999887631111111111 1111233456799
Q ss_pred EeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 436 ISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 436 I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
|.+++.+|+|.|+|.|.|..|....++.|.|..++..
T Consensus 277 I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 313 (524)
T 2ec8_A 277 ISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFI 313 (524)
T ss_dssp ESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEE
T ss_pred ECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCce
Confidence 9999999999999999999999999999999876544
No 88
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.74 E-value=9.4e-18 Score=171.83 Aligned_cols=156 Identities=17% Similarity=0.307 Sum_probs=110.0
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCC--Ccccc--cC--------Cccceec---cCCcEEEEeeeeecCcee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSE--NKPIT--LG--------SWKDSAV---ASSTLNFTRINRINMGAY 361 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~--~~~~~--~~--------~~~~~~~---~~~sL~I~~Vt~~DsG~Y 361 (902)
.+..+.+.+|++|+|.|.+.+.|.+.|.|+|++ ..+.. .. ..+.... .+.+|.|.+++.+|+|.|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (213)
T 3nl4_L 7 TPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATY 86 (213)
T ss_dssp ECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEE
Confidence 356688999999999999999999999999853 11110 00 1111111 223799999999999999
Q ss_pred EEeecC--------------------CCCEEEEcCceeeeecCceEEEEEEeec-cCCceEEEEecCCeeeecCCceEEE
Q psy12803 362 MCLADN--------------------VPPQILIRNRRVGVPIGRTATLECEVEA-FPLSVRYWEFIDGTLIEHDGVKYSI 420 (902)
Q Consensus 362 tC~A~N--------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P~v~W~k~~~~l~~~~~~~~~~ 420 (902)
+|.|.| .+|.+...+....+.+|+.++|.|.+.+ .|.|.|.|++++..+..........
T Consensus 87 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~ 166 (213)
T 3nl4_L 87 YCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTP 166 (213)
T ss_dssp EEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECC
T ss_pred EEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCc
Confidence 999987 1233333222233456999999999998 8999999999876653211011112
Q ss_pred eecCCCceeeEeEEEEeccCCCCCeEEEEEEE
Q psy12803 421 SDVDKGSYQYIMQLNISNVNISDFDTYRCISK 452 (902)
Q Consensus 421 ~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~ 452 (902)
.....+.+...++|.|.++..+|+|.|+|.|.
T Consensus 167 ~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 167 QNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 22344556667889999999999999999999
No 89
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.74 E-value=1.1e-17 Score=169.12 Aligned_cols=152 Identities=13% Similarity=0.138 Sum_probs=108.1
Q ss_pred EEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC--------------
Q psy12803 302 VVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN-------------- 367 (902)
Q Consensus 302 ~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-------------- 367 (902)
.+.+|++|+|.|.+.+. .+.+.|+|++..+............+..|.|.+++.+|+|.|+|.+.|
T Consensus 14 ~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~ 92 (188)
T 1oll_A 14 MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLV 92 (188)
T ss_dssp EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEE
T ss_pred cCCCCCCEEEEEecCCC-CCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEE
Confidence 78999999999999874 478999998765432111111223456899999999999999999975
Q ss_pred -----CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCC
Q psy12803 368 -----VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNIS 442 (902)
Q Consensus 368 -----~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~ 442 (902)
.+|.+...+ ...+.+|++++|.|.+.+. .+.+.|++++..+.. ... ... ...+|.|.+|+.+
T Consensus 93 V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~----~~~-~~~------~~~~L~I~~v~~~ 159 (188)
T 1oll_A 93 VTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV----QRG-YGK------VQAEFPLGPVTTA 159 (188)
T ss_dssp EESCSCCCEEEEES-CSEEETTCEEEEEEECSSS-CSEEEEEEESSSCEE----EEE-ECS------SEEEEEEEECCGG
T ss_pred ecccCCCCeEEECC-CCccccCCEEEEEEEcCCC-CCEEEEEECCccccc----ccc-CCC------ceeEEEECCCCcC
Confidence 144554444 3458899999999998764 578999998876543 111 111 1345999999999
Q ss_pred CCeEEEEEEEeCCc---eeEEEEEEEee
Q psy12803 443 DFDTYRCISKNEVD---IAKGSLILFES 467 (902)
Q Consensus 443 DsG~YtC~A~N~~G---~~~~s~~L~V~ 467 (902)
|+|.|+|.|.|... ..+..+.|.|.
T Consensus 160 d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 160 HRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp GCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred CCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 99999999998641 12344555553
No 90
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.74 E-value=2.9e-17 Score=167.46 Aligned_cols=166 Identities=16% Similarity=0.181 Sum_probs=115.9
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCC---ceEEecCCCcccccCC------------------------ccceeccCCcEE
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKP---SIIWKTSENKPITLGS------------------------WKDSAVASSTLN 349 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p---~v~W~k~~~~~~~~~~------------------------~~~~~~~~~sL~ 349 (902)
.+.++.+.+|++|+|.|.+.+.+.+ .|+|+|++..+..... .......+.+|.
T Consensus 7 vp~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~ 86 (225)
T 4fmk_A 7 VLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLA 86 (225)
T ss_dssp CCSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEE
T ss_pred eCCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEE
Confidence 3445788999999999999987765 3899998765432100 001112345899
Q ss_pred EEeeeeecCceeEEeecC---------------CCCEEEEcCceeeeecCceEEEEEEe-eccCCceEEEEecCCeeeec
Q psy12803 350 FTRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTATLECEV-EAFPLSVRYWEFIDGTLIEH 413 (902)
Q Consensus 350 I~~Vt~~DsG~YtC~A~N---------------~~P~i~~~p~~~~v~~G~~v~L~C~a-~g~P~P~v~W~k~~~~l~~~ 413 (902)
|.+++.+|+|.|+|.|.| .+|.+...+.......++.+.+.|.+ .+.|.+.+.|++++..+...
T Consensus 87 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~ 166 (225)
T 4fmk_A 87 FRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKD 166 (225)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEE
T ss_pred EccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCC
Confidence 999999999999999987 33444443444445567777777765 56788899998887665432
Q ss_pred CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12803 414 DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFE 466 (902)
Q Consensus 414 ~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V 466 (902)
. ......++.+...++|.|.+++.+|+|.|+|+|.|..+....++.|.+
T Consensus 167 ~----~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l 215 (225)
T 4fmk_A 167 T----QEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTL 215 (225)
T ss_dssp E----EEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred c----ceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEE
Confidence 1 112233445556778999999999999999999999887654444443
No 91
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.73 E-value=5.1e-18 Score=170.48 Aligned_cols=149 Identities=15% Similarity=0.047 Sum_probs=108.1
Q ss_pred cEEEEcCCeEEEEEecCC--CCCCceEEecCCCccc--------ccCCccceeccCCcEEEEeeeeecCceeEEeecCC-
Q psy12803 300 PIVVREGDNVRLRCVATG--HPKPSIIWKTSENKPI--------TLGSWKDSAVASSTLNFTRINRINMGAYMCLADNV- 368 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G--~P~p~v~W~k~~~~~~--------~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~- 368 (902)
.+.+.+|++|+|.|.... .+.+.|.|+|++..+. .....+.....+++|.|.+++.+|+|.|+|.|.|.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~ 84 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN 84 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCC
Confidence 367899999999996544 6678999999874332 11223344456778999999999999999999981
Q ss_pred -CC------EEEE--cCc-eeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEec
Q psy12803 369 -PP------QILI--RNR-RVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISN 438 (902)
Q Consensus 369 -~P------~i~~--~p~-~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~ 438 (902)
.. .+.+ .+. ......+..++|.|.+.+.|.|.|.|++++..+..... +.|.+
T Consensus 85 g~~~~~~~~~l~V~~~~~~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~------------------~~i~~ 146 (176)
T 1hng_A 85 GTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ------------------KTMSY 146 (176)
T ss_dssp CCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESS------------------SEEEE
T ss_pred CCEEEEEEEEEEEeCCCCCCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCc------------------EEEEE
Confidence 11 1111 111 12223455799999999999999999998766543211 44557
Q ss_pred cCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12803 439 VNISDFDTYRCISKNEVDIAKGSLILFE 466 (902)
Q Consensus 439 V~~~DsG~YtC~A~N~~G~~~~s~~L~V 466 (902)
++.+|+|.|+|.|.|.+|..++++.|.+
T Consensus 147 ~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 147 QWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp ECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEccCCeEEEEEEEecCCCceecccccC
Confidence 7899999999999999999988877755
No 92
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.73 E-value=1.9e-17 Score=193.67 Aligned_cols=169 Identities=16% Similarity=0.168 Sum_probs=120.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCC--ceEEecCCCcccccCCcc-ceeccC------CcEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKP--SIIWKTSENKPITLGSWK-DSAVAS------STLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p--~v~W~k~~~~~~~~~~~~-~~~~~~------~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+....+.+|++++|.|.+.+.|.+ .|+|+|++..+....... .....+ +.|.|.+++.+|+|.|+|.|.|
T Consensus 120 ~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n 199 (523)
T 2rcj_C 120 FPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH 199 (523)
T ss_pred cCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEe
Confidence 3444566789999999999997654 899999876653221110 011111 3699999999999999999998
Q ss_pred ------------------CCCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCeeeecCCceEEEeecCCCc
Q psy12803 368 ------------------VPPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGTLIEHDGVKYSISDVDKGS 427 (902)
Q Consensus 368 ------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s 427 (902)
.+|.+........+.+|+.+.|.|.+.+. |.| .|.|++++..+....... .....+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~---~~~~~g~ 276 (523)
T 2rcj_C 200 EGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPA---VLQSSGL 276 (523)
T ss_pred cCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCc---EecCCCc
Confidence 13444433333456799999999999987 878 899999886642211111 1123344
Q ss_pred eeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecC
Q psy12803 428 YQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 428 ~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~ 469 (902)
+...++|.|.+++.+| |.|+|.|.|..|....++.|.|...
T Consensus 277 ~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~ 317 (523)
T 2rcj_C 277 YSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSL 317 (523)
T ss_pred EEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcC
Confidence 5567789999999999 9999999999999877777766543
No 93
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.73 E-value=1.1e-17 Score=171.41 Aligned_cols=164 Identities=15% Similarity=0.174 Sum_probs=112.4
Q ss_pred CCcEEEEcCCeEEEEEecCCCC---CCceEEecCCC--ccc--c--------cCCccceec---cCCcEEEEeeeeecCc
Q psy12803 298 SSPIVVREGDNVRLRCVATGHP---KPSIIWKTSEN--KPI--T--------LGSWKDSAV---ASSTLNFTRINRINMG 359 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P---~p~v~W~k~~~--~~~--~--------~~~~~~~~~---~~~sL~I~~Vt~~DsG 359 (902)
+..+.+.+|++|+|.|.+.+.| .+.|.|+|++. .+. . ....+.... ...+|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 5668899999999999999977 47899999642 210 0 001122111 2238999999999999
Q ss_pred eeEEeecCC-------------------CCEEEEcCceeeeecCceEEEEEEeeccC-Cc-eEEEEecCCeeeecCCceE
Q psy12803 360 AYMCLADNV-------------------PPQILIRNRRVGVPIGRTATLECEVEAFP-LS-VRYWEFIDGTLIEHDGVKY 418 (902)
Q Consensus 360 ~YtC~A~N~-------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P-~P-~v~W~k~~~~l~~~~~~~~ 418 (902)
.|+|.|.|. +|.+...+....+.+|+.++|.|.+.+.+ .+ .|.|++++..+.. .....
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~-~~~~~ 165 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTA-GMETT 165 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT-TEEEC
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCC-CeecC
Confidence 999999881 22222222222233688999999999864 43 8999998766532 11111
Q ss_pred EEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEE
Q psy12803 419 SISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSL 462 (902)
Q Consensus 419 ~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~ 462 (902)
......++.+...+.|.|..+..+|+|.|+|.|.|.....+.++
T Consensus 166 ~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~v 209 (212)
T 1q0x_L 166 QPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKTL 209 (212)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEEE
T ss_pred CceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeeee
Confidence 11223445666778899999999999999999999887655544
No 94
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.73 E-value=8.6e-19 Score=189.98 Aligned_cols=162 Identities=14% Similarity=0.093 Sum_probs=118.5
Q ss_pred CCcEEEEcCCeEEEEEecCCC-CCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCCCCEEE---
Q psy12803 298 SSPIVVREGDNVRLRCVATGH-PKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNVPPQIL--- 373 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~-P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~~P~i~--- 373 (902)
+.++.+.+|++++|.|.+.+. |.+.+.|+|++..+..... ........+|.|.+++.+|+|.|+|.|.|......
T Consensus 13 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 91 (317)
T 2y25_A 13 YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEK-HDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRL 91 (317)
T ss_dssp EEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC------CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEE
T ss_pred eeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCc-EEEECCeEEEEEccCCcccCeEEEEEEECCCCcEEEEE
Confidence 334789999999999999987 8899999998765432222 22223446899999999999999999998211111
Q ss_pred -----------EcCceeeeecCceEEEEEEeec----------cCCceEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 374 -----------IRNRRVGVPIGRTATLECEVEA----------FPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 374 -----------~~p~~~~v~~G~~v~L~C~a~g----------~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
..+....+.+|+.+.|.|.+.+ .|.+.+.|++++..+.... ++.+..... .+
T Consensus 92 ~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~--~~~~~~~~~-----~~ 164 (317)
T 2y25_A 92 KLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSD--RVKTGVTGE-----QI 164 (317)
T ss_dssp CCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCS--SEEEEECSS-----EE
T ss_pred EEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCC--CeEEeccCC-----EE
Confidence 1112234557888888888877 7899999999988775433 233322221 34
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
+|.|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 165 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 199 (317)
T 2y25_A 165 WLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 199 (317)
T ss_dssp EEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EEEECcCCcccCeeEEEEEEeCCceEEEEEEEeee
Confidence 69999999999999999999999999988888764
No 95
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.73 E-value=4e-18 Score=188.23 Aligned_cols=168 Identities=20% Similarity=0.218 Sum_probs=96.8
Q ss_pred CCcEEEEcCCeEEEEEec-----CCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-----
Q psy12803 298 SSPIVVREGDNVRLRCVA-----TGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a-----~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
+....+.+|+++.|.|.+ .+.|.+.++|+|++..+.. . .........|.|.+++.+|+|.|+|.|.|
T Consensus 127 ~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~--~-~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~ 203 (349)
T 4dep_C 127 PVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQN--F-NNVIPEGMNLSFLIALISNNGNYTCVVTYPENGR 203 (349)
T ss_dssp CEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCS--C-SSEEEETTEEEEESCCGGGCEEEEEEEEEEETTE
T ss_pred CcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCC--c-cceeecCCEEEEeeeeecCCcEEEEEEEEeeCCE
Confidence 445678899999999985 7789999999997765421 1 22333446799999999999999999988
Q ss_pred -------------C------CCEEEEcCcee--eeecCceEEEEEEee----ccCCceEEEEecCCeeeec-CCceE--E
Q psy12803 368 -------------V------PPQILIRNRRV--GVPIGRTATLECEVE----AFPLSVRYWEFIDGTLIEH-DGVKY--S 419 (902)
Q Consensus 368 -------------~------~P~i~~~p~~~--~v~~G~~v~L~C~a~----g~P~P~v~W~k~~~~l~~~-~~~~~--~ 419 (902)
. +|.+....... .+.+|++++|.|.+. +.|.|.+.|++++..+... ....+ .
T Consensus 204 ~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~ 283 (349)
T 4dep_C 204 TFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINES 283 (349)
T ss_dssp EEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEE
T ss_pred EEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccc
Confidence 1 44444433322 678899999999999 5789999999988776441 11111 0
Q ss_pred EeecCCCceeeEeEEEEeccCCCCC-eEEEEEEEeCCceeEEEEEEEeec
Q psy12803 420 ISDVDKGSYQYIMQLNISNVNISDF-DTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 420 ~~~~~~~s~~~~stL~I~~V~~~Ds-G~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
............++|.|.+++.+|+ |.|+|.|.|..|....++.|.|..
T Consensus 284 ~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 284 ISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp EECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC-----
T ss_pred eeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 0011111123456699999999999 999999999999999999999865
No 96
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.73 E-value=9.8e-18 Score=177.78 Aligned_cols=173 Identities=18% Similarity=0.301 Sum_probs=119.2
Q ss_pred cCCcEEEEcCCeEEEEEecC---CCCCCceEEecCCCcccccC----------------Ccccee-----ccCCcEEEEe
Q psy12803 297 SSSPIVVREGDNVRLRCVAT---GHPKPSIIWKTSENKPITLG----------------SWKDSA-----VASSTLNFTR 352 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~---G~P~p~v~W~k~~~~~~~~~----------------~~~~~~-----~~~~sL~I~~ 352 (902)
.+..+.+.+|++|+|.|.+. +.+.+.|.|+|.+....... ..+... ..+.+|.|.+
T Consensus 11 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 90 (268)
T 3mj6_A 11 SSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQD 90 (268)
T ss_dssp -CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECS
T ss_pred CCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECC
Confidence 34558899999999999998 77888999999654321110 011111 2336899999
Q ss_pred eeeecCceeEEeecCC--------CCEEEE---cCceeeeecCceEEEEEEe---eccCCceEEEEecCCeeeecC----
Q psy12803 353 INRINMGAYMCLADNV--------PPQILI---RNRRVGVPIGRTATLECEV---EAFPLSVRYWEFIDGTLIEHD---- 414 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N~--------~P~i~~---~p~~~~v~~G~~v~L~C~a---~g~P~P~v~W~k~~~~l~~~~---- 414 (902)
++.+|+|.|+|.|.|. ...+.+ .+....+.+|++++|.|.+ .+.|.+.+.|+++++......
T Consensus 91 v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~ 170 (268)
T 3mj6_A 91 VQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLS 170 (268)
T ss_dssp CCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEE
T ss_pred CCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEE
Confidence 9999999999999871 111111 3456788999999999999 677999999998654321100
Q ss_pred ------------C----ceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 415 ------------G----VKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 415 ------------~----~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
. .++.+... ......+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|...++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~ 241 (268)
T 3mj6_A 171 YDSNMRSGKFQSLGRFRNRVDLTGD---ISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQ 241 (268)
T ss_dssp EETTSSSCEEECSSTTTTTEEECSC---GGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC---
T ss_pred ecCCCCccccccccccccceEeecc---CCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCe
Confidence 0 01111000 0011345999999999999999999999999999999999655443
No 97
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.72 E-value=7.7e-18 Score=188.31 Aligned_cols=194 Identities=15% Similarity=0.244 Sum_probs=135.1
Q ss_pred cccccccccCCCCCCCCcccccCCcccCCceeecCCcEEEEcCCeEEEEEecCCCCC---CceEEecCCCcccccC---C
Q psy12803 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPK---PSIIWKTSENKPITLG---S 337 (902)
Q Consensus 264 ~c~~kN~scs~~s~~~~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G~P~---p~v~W~k~~~~~~~~~---~ 337 (902)
.|.+.|..+...+....+.+.++|.+. ..+....+.+|++++|.|.+.+.+. +.+.|+|++..+.... .
T Consensus 81 ~C~a~n~~g~~~s~~~~v~v~~~p~~~-----~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~ 155 (388)
T 2v5m_A 81 ACLARNQFGSIISRDVHVRAVVAQYYE-----ADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYD 155 (388)
T ss_dssp EEEEEETTEEEECCCEEEEEECCCCCC-----CBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBT
T ss_pred EEEEEccCCeEEecceEEEEccccccc-----cCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCC
Confidence 455555554433333333344444432 2345678999999999999998653 7899999887654321 2
Q ss_pred ccceeccCCcEEEEeeeeecC-ceeEEeecCCC----------CEEEE-c-------------CceeeeecCceEEEEEE
Q psy12803 338 WKDSAVASSTLNFTRINRINM-GAYMCLADNVP----------PQILI-R-------------NRRVGVPIGRTATLECE 392 (902)
Q Consensus 338 ~~~~~~~~~sL~I~~Vt~~Ds-G~YtC~A~N~~----------P~i~~-~-------------p~~~~v~~G~~v~L~C~ 392 (902)
.+.....+++|.|.+++.+|+ |.|+|.|.|.. ..+.+ . .....+.+|+.++|.|.
T Consensus 156 ~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~ 235 (388)
T 2v5m_A 156 GKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCP 235 (388)
T ss_dssp TTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCC
T ss_pred CcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEE
Confidence 234445667999999999999 99999998710 01111 1 12356788999999999
Q ss_pred eeccCCceEEEEecCCeeee----cCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 393 VEAFPLSVRYWEFIDGTLIE----HDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 393 a~g~P~P~v~W~k~~~~l~~----~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
+.+.|.|.+.|++++..+.. ....++. ...++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 236 ~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~---------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 306 (388)
T 2v5m_A 236 AQGFPAPSFRWYKFIEGTTRKQAVVLNDRVK---------QVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTA 306 (388)
T ss_dssp CEEESCCEEEEEEECTTSSCEEECCCSSSEE---------EETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEecCCCCcccccccccCcee---------cccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeC
Confidence 99999999999987543211 0111111 1123599999999999999999999999999999999987
Q ss_pred CCC
Q psy12803 469 AKT 471 (902)
Q Consensus 469 ~p~ 471 (902)
++.
T Consensus 307 ~p~ 309 (388)
T 2v5m_A 307 PLS 309 (388)
T ss_dssp EEE
T ss_pred CCc
Confidence 543
No 98
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.72 E-value=1.2e-17 Score=184.52 Aligned_cols=161 Identities=14% Similarity=0.123 Sum_probs=117.3
Q ss_pred CCcEEEEcCCeEEEEEecCCCCC-----------CceEEecCCCccc---ccC---CccceeccCCcEEEEeeeeecCce
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPK-----------PSIIWKTSENKPI---TLG---SWKDSAVASSTLNFTRINRINMGA 360 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~-----------p~v~W~k~~~~~~---~~~---~~~~~~~~~~sL~I~~Vt~~DsG~ 360 (902)
..++.+.+|+++.|.|.+.+.|. +.|.|+|++.... ... ........+++|.|.+++.+|+|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGN 93 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEE
Confidence 45578999999999999998765 9999999874211 111 122333456799999999999999
Q ss_pred eEEeecCCCC------EEEE------------cCceeeeecCceEEEEEEe-----eccCCceEEEEecCCeeeecCCce
Q psy12803 361 YMCLADNVPP------QILI------------RNRRVGVPIGRTATLECEV-----EAFPLSVRYWEFIDGTLIEHDGVK 417 (902)
Q Consensus 361 YtC~A~N~~P------~i~~------------~p~~~~v~~G~~v~L~C~a-----~g~P~P~v~W~k~~~~l~~~~~~~ 417 (902)
|+|.|.|... .+.+ .+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ..+
T Consensus 94 Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~--~~~ 171 (349)
T 4dep_C 94 YTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQN--FNN 171 (349)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCS--CSS
T ss_pred EEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCC--ccc
Confidence 9999999110 0111 1224567889999999985 7889999999998765522 222
Q ss_pred EEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCC-cee---EEEEEEEeecC
Q psy12803 418 YSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEV-DIA---KGSLILFESNA 469 (902)
Q Consensus 418 ~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~-G~~---~~s~~L~V~~~ 469 (902)
+... . +.|.|.+++.+|+|.|+|.|.|.. |.. +..+.|.|...
T Consensus 172 ~~~~--~-------~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~ 218 (349)
T 4dep_C 172 VIPE--G-------MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGS 218 (349)
T ss_dssp EEEE--T-------TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECC
T ss_pred eeec--C-------CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEcc
Confidence 2211 1 249999999999999999999987 554 67777777654
No 99
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.72 E-value=1.6e-17 Score=172.53 Aligned_cols=168 Identities=16% Similarity=0.261 Sum_probs=116.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcc----cc--------cCCccceec---cCCcEEEEeeeeecCcee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKP----IT--------LGSWKDSAV---ASSTLNFTRINRINMGAY 361 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~----~~--------~~~~~~~~~---~~~sL~I~~Vt~~DsG~Y 361 (902)
.+..+.+.+|++|+|.|.+.+.|.+.+.|+|.+... +. ....+.... .+.+|.|.+++.+|+|.|
T Consensus 30 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 109 (237)
T 3sob_L 30 SPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATY 109 (237)
T ss_dssp ECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEE
Confidence 466789999999999999999999999999843110 00 001111111 334799999999999999
Q ss_pred EEeecC------------------CCCEEEEcCceeeeecCceEEEEEEeecc-C-CceEEEEecCCeeeecCCceEEEe
Q psy12803 362 MCLADN------------------VPPQILIRNRRVGVPIGRTATLECEVEAF-P-LSVRYWEFIDGTLIEHDGVKYSIS 421 (902)
Q Consensus 362 tC~A~N------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P-~P~v~W~k~~~~l~~~~~~~~~~~ 421 (902)
+|.+.| .+|.+...+....+.+|+.++|.|.+.+. | .+.|.|++++..+...........
T Consensus 110 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 189 (237)
T 3sob_L 110 YCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ 189 (237)
T ss_dssp EEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCC
T ss_pred EEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeeccccc
Confidence 999987 23333333333334468899999999984 5 589999988766532110122223
Q ss_pred ecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 422 DVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 422 ~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
...++.+...++|.|..+..+|+|.|+|.|.|.......+..+
T Consensus 190 ~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 232 (237)
T 3sob_L 190 DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF 232 (237)
T ss_dssp CTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEEE
T ss_pred ccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceeeee
Confidence 3455667778889999999999999999999987655444333
No 100
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.72 E-value=1e-17 Score=182.46 Aligned_cols=162 Identities=18% Similarity=0.216 Sum_probs=120.5
Q ss_pred CCcEEEEcCCeEEEEEecC-CCCCCceEEecCCCcccccCCccce----eccCCcEEEEeeeeecCceeEEeecC-----
Q psy12803 298 SSPIVVREGDNVRLRCVAT-GHPKPSIIWKTSENKPITLGSWKDS----AVASSTLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~-G~P~p~v~W~k~~~~~~~~~~~~~~----~~~~~sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
.....+.+++.+.|.|.+. +.|.+.+.|++++..+......... ....+.|.|..+..+|+|.|+|.|.|
T Consensus 124 ~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~ 203 (313)
T 4fqp_A 124 VQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEK 203 (313)
T ss_dssp ECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSS
T ss_pred ccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCc
Confidence 3445567889999999876 6899999999987765432211100 01123588889999999999999998
Q ss_pred -----------CCCEEEEcC-ceeeeecCceEEEEEEeeccCCc-eEEEEecCCeeeecCCceEEEeecCCCceeeEeEE
Q psy12803 368 -----------VPPQILIRN-RRVGVPIGRTATLECEVEAFPLS-VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQL 434 (902)
Q Consensus 368 -----------~~P~i~~~p-~~~~v~~G~~v~L~C~a~g~P~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL 434 (902)
.+|.+.+.+ ....+.+|+.++|.|.+.|+|.| .|.|++++..+.. .. . .. . .+|
T Consensus 204 ~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~--~~--~-~~--~------~~L 270 (313)
T 4fqp_A 204 PQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPP--FA--V-AQ--G------AQL 270 (313)
T ss_dssp CEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCT--TE--E-EE--T------TEE
T ss_pred cceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCC--ce--E-Ee--C------CEE
Confidence 345554433 33456678999999999999999 6999998877632 11 1 11 1 249
Q ss_pred EEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 435 NISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 435 ~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
.|.+++.+|+|.|+|.|.|.+|..+.++.|.|.+.|+.
T Consensus 271 ~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~PP~ 308 (313)
T 4fqp_A 271 LIRPVDKPINTTLICNVTNALGARQAELTVQVKEGPPH 308 (313)
T ss_dssp EECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC--
T ss_pred EECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCCCC
Confidence 99999999999999999999999999999999887654
No 101
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.72 E-value=5.2e-17 Score=174.13 Aligned_cols=161 Identities=14% Similarity=0.155 Sum_probs=114.9
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-------------
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------------- 367 (902)
+.+.+|+++.|.|.+. .|.+.++|++.+...... ........+. ..+|+|.|+|.|.|
T Consensus 105 ~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~----~~~~~~~~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~ 175 (289)
T 3mjg_X 105 IFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALP----VPYDHQRGFS----GIFEDRSYICKTTIGDREVDSDAYYVY 175 (289)
T ss_dssp EEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCC----CCEETTTEEE----ECCCSSEEEEEEEETTEEEECCCEEEE
T ss_pred EEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccc----eeecCCcCee----eeccCcEEEEEEEeCCceeeeeeEEEE
Confidence 6789999999999999 688899998865221111 0111111121 46799999999986
Q ss_pred ----CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCC
Q psy12803 368 ----VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISD 443 (902)
Q Consensus 368 ----~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~D 443 (902)
.+|.+...+....+.+|++++|.|.+.+.|.|.+.|++++............. .........++|.|.+++.+|
T Consensus 176 v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~I~~v~~~D 253 (289)
T 3mjg_X 176 RLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDF--LLDMPYHIRSILHIPSAELED 253 (289)
T ss_dssp ECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEE--SCTTTTEEEEEEEESSCCSSC
T ss_pred ecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccc--cCCcceEEEEEEEEcccChhh
Confidence 14555555556778999999999999999999999997665432111111111 111122345679999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 444 FDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 444 sG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|+|.|.|.+|..++++.|.|...+..
T Consensus 254 ~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~ 282 (289)
T 3mjg_X 254 SGTYTCNVTESVNDHQDEKAINITVVESG 282 (289)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEEEEC--
T ss_pred CcEEEEEeecCCCCceeEEEEEEEEEecC
Confidence 99999999999999999999999876543
No 102
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.72 E-value=6.9e-18 Score=185.68 Aligned_cols=158 Identities=19% Similarity=0.255 Sum_probs=118.6
Q ss_pred CcEEEEcCCeEEEEEecCCC---------CCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCc-eeEEeecCC
Q psy12803 299 SPIVVREGDNVRLRCVATGH---------PKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMG-AYMCLADNV 368 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~---------P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG-~YtC~A~N~ 368 (902)
.++.+.+|+++.|.|.+.+. |.+.|+|+|++..+..... . ..+++|.|.+++.+|+| .|+|.|.|.
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~--~--~~~~~L~i~~v~~~D~Gs~Y~C~a~n~ 112 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNR--R--VKNGDLWIANYTSNDSHRRYLCTVTTK 112 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECST--T--EETTEEEESSCCGGGGGCCEEEEEECT
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCc--e--eecceEEEcCCChHhCCCcEEEEEEeC
Confidence 45779999999999999884 6689999998876543221 1 44779999999999999 999999991
Q ss_pred ---------------CCEEEEcCceeeeecCceEEEEEEeeccC-CceEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 369 ---------------PPQILIRNRRVGVPIGRTATLECEVEAFP-LSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 369 ---------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P-~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
+|.+........+.+|+++.|.|.+.+.| .|.+.|++++..+.. ...++... . .
T Consensus 113 ~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~-~~~~~~~~---~------~ 182 (329)
T 3oq3_B 113 NGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELII-DGTKYSQS---G------Q 182 (329)
T ss_dssp TSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCC-SSSSEEEE---T------T
T ss_pred CCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCC-CCceEecC---C------C
Confidence 22222222233456799999999999999 999999998877632 33333332 1 2
Q ss_pred EEEEeccCCCCCeEEEEEEEeC--CceeE----EEEEEEeecCC
Q psy12803 433 QLNISNVNISDFDTYRCISKNE--VDIAK----GSLILFESNAK 470 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~--~G~~~----~s~~L~V~~~p 470 (902)
+|.|.+++.+|+|.|+|.|.|. .|... ..+.|.|...+
T Consensus 183 ~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~ 226 (329)
T 3oq3_B 183 NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQ 226 (329)
T ss_dssp EEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCC
T ss_pred EEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCC
Confidence 4999999999999999999997 65443 34778887655
No 103
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.72 E-value=2e-17 Score=169.36 Aligned_cols=163 Identities=18% Similarity=0.263 Sum_probs=114.7
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCc--c--ccc--------CCccceec---cCCcEEEEeeeeecCcee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENK--P--ITL--------GSWKDSAV---ASSTLNFTRINRINMGAY 361 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~--~--~~~--------~~~~~~~~---~~~sL~I~~Vt~~DsG~Y 361 (902)
.+..+.+.+|++|+|.|.+.+.|.+.+.|+|.+.. . +.. ...+.... .+.+|.|.+++.+|+|.|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (213)
T 3r06_A 7 SPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSY 86 (213)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEE
T ss_pred CCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEE
Confidence 35668899999999999999999999999984311 1 000 01111111 234899999999999999
Q ss_pred EEeecC------------------CCCEEEEcCceeeeecCceEEEEEEeeccCC--ceEEEEecCCeeeecCCceEEEe
Q psy12803 362 MCLADN------------------VPPQILIRNRRVGVPIGRTATLECEVEAFPL--SVRYWEFIDGTLIEHDGVKYSIS 421 (902)
Q Consensus 362 tC~A~N------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~--P~v~W~k~~~~l~~~~~~~~~~~ 421 (902)
+|.|.| .+|.+...+....+..|+.++|.|.+.+.|+ +.+.|++++..+...........
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 166 (213)
T 3r06_A 87 YCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQ 166 (213)
T ss_dssp EEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCC
T ss_pred EEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCce
Confidence 999987 2334444333334456888999999998754 48999998766532110222223
Q ss_pred ecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeE
Q psy12803 422 DVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAK 459 (902)
Q Consensus 422 ~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~ 459 (902)
...++.+...++|.|..+..+|+|.|+|.|.|......
T Consensus 167 ~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~ 204 (213)
T 3r06_A 167 DSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAA 204 (213)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSC
T ss_pred eCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcc
Confidence 34556677788899999999999999999999875443
No 104
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.72 E-value=2e-17 Score=174.64 Aligned_cols=163 Identities=15% Similarity=0.265 Sum_probs=113.2
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC-----CCceEEecCC-Cccc----------cc-CCccceec---cCCcEEEEeeee
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP-----KPSIIWKTSE-NKPI----------TL-GSWKDSAV---ASSTLNFTRINR 355 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P-----~p~v~W~k~~-~~~~----------~~-~~~~~~~~---~~~sL~I~~Vt~ 355 (902)
..+..+.+.+|++|+|.|.+.+.| .+.|.|+|++ +... .. ...+.... ...+|.|.+++.
T Consensus 43 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 122 (254)
T 2c1o_A 43 QSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEA 122 (254)
T ss_dssp EECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred eCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCc
Confidence 346778999999999999999987 4899999853 2211 00 01122221 223799999999
Q ss_pred ecCceeEEeecCC------------------CCEEEEcCceeeeecCceEEEEEEeecc-CC-ceEEEEecCCeeeecCC
Q psy12803 356 INMGAYMCLADNV------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PL-SVRYWEFIDGTLIEHDG 415 (902)
Q Consensus 356 ~DsG~YtC~A~N~------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k~~~~l~~~~~ 415 (902)
+|+|.|+|.|.|. +|.+...+....+.+|+.++|.|.+.+. |. +.|.|++++..+.....
T Consensus 123 ~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 202 (254)
T 2c1o_A 123 EDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL 202 (254)
T ss_dssp GGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEE
T ss_pred ccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcce
Confidence 9999999999881 3444433222223458899999999985 44 46999998877643201
Q ss_pred ceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee
Q psy12803 416 VKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA 458 (902)
Q Consensus 416 ~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~ 458 (902)
.........++.+...++|.|.++..+|+|.|+|.|.|.....
T Consensus 203 ~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 203 NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred eccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 1222222344555667889999999999999999999987654
No 105
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.72 E-value=9.2e-18 Score=183.25 Aligned_cols=157 Identities=17% Similarity=0.221 Sum_probs=112.9
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-------------
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------------- 367 (902)
..+.+|++|+|.|.+.+. .+.+.|+|++..+... .......+.|.|.+++.+|+|.|+|.|.|
T Consensus 33 ~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~---~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~ 108 (316)
T 3vh8_G 33 AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPI---FHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNP 108 (316)
T ss_dssp SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCH---HHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCC
T ss_pred CccCCCCCEEEEEEccCC-CceEEEEeCCCcccee---ecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCc
Confidence 468899999999999997 6899999988764321 11223467899999999999999999864
Q ss_pred ---------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEec
Q psy12803 368 ---------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISN 438 (902)
Q Consensus 368 ---------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~ 438 (902)
.+|.+...+... +.+|++++|.|.+. .+.+.+.|++++..+....... ... . ......|.|.+
T Consensus 109 ~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~-~~~-~----~~~~~~L~i~~ 180 (316)
T 3vh8_G 109 VVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVG-QIH-D----GVSKANFSIGP 180 (316)
T ss_dssp EEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEEC-EEE-T----TEEEEEEEECS
T ss_pred EEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeee-eec-C----CCceEEEEECC
Confidence 134454444433 78999999999995 4567899998876653211100 000 0 01235699999
Q ss_pred cCCCCCeEEEEEEEeCCcee-----EEEEEEEeecC
Q psy12803 439 VNISDFDTYRCISKNEVDIA-----KGSLILFESNA 469 (902)
Q Consensus 439 V~~~DsG~YtC~A~N~~G~~-----~~s~~L~V~~~ 469 (902)
++.+|+|.|+|.|.|..|.. +..+.|.|...
T Consensus 181 v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~ 216 (316)
T 3vh8_G 181 MMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGP 216 (316)
T ss_dssp CCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECS
T ss_pred CChhhCceEEEEEecCCCCccccCCCCCEEEEecCC
Confidence 99999999999999998742 45566777653
No 106
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.72 E-value=2.2e-18 Score=186.87 Aligned_cols=164 Identities=14% Similarity=0.240 Sum_probs=120.7
Q ss_pred cCCcEEEEcCCeEEEEEec-CCCCCCceEEecCCCcccccCCc--cceeccCCcEEEEeeeeecCceeEEeecC------
Q psy12803 297 SSSPIVVREGDNVRLRCVA-TGHPKPSIIWKTSENKPITLGSW--KDSAVASSTLNFTRINRINMGAYMCLADN------ 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a-~G~P~p~v~W~k~~~~~~~~~~~--~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------ 367 (902)
.+..+.+.+|+.+.|.|.+ .+.|.+.|+|+|++..+...... .......+.|.|.++..+|+|.|+|.|.|
T Consensus 120 ~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~ 199 (308)
T 4fom_A 120 GPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKD 199 (308)
T ss_dssp CSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSC
T ss_pred ccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCc
Confidence 4445556678999999985 57999999999988765432210 01111224699999999999999999998
Q ss_pred ----------CCCEEEEcC-ceeeeecCceEEEEEEeeccCCc-eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEE
Q psy12803 368 ----------VPPQILIRN-RRVGVPIGRTATLECEVEAFPLS-VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLN 435 (902)
Q Consensus 368 ----------~~P~i~~~p-~~~~v~~G~~v~L~C~a~g~P~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~ 435 (902)
.+|.+...+ ....+.+|+.++|.|.+.|.|.| .+.|++++..+.... . .... ..|.
T Consensus 200 ~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~------~-~~~~-----~~l~ 267 (308)
T 4fom_A 200 IRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGL------L-ASDN-----TLHF 267 (308)
T ss_dssp EEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSC------B-CSTT-----EEEC
T ss_pred eEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcE------E-EcCC-----eEEE
Confidence 234443332 23456678999999999999998 699999887763311 0 1111 2377
Q ss_pred EeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 436 ISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 436 I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
|.+++.+|+|.|+|.|.|.+|..+.++.|.|.++|..
T Consensus 268 i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~~ 304 (308)
T 4fom_A 268 VHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPHH 304 (308)
T ss_dssp CSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC--
T ss_pred ECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCCC
Confidence 8999999999999999999999999999999987753
No 107
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.72 E-value=6.1e-18 Score=189.35 Aligned_cols=168 Identities=20% Similarity=0.253 Sum_probs=125.3
Q ss_pred CcEEEEcCCeEEEEEec-CCCCCCceEEecCCC--cccccC---CccceeccCCcEEEEeeeeecCc---eeEEeecCC-
Q psy12803 299 SPIVVREGDNVRLRCVA-TGHPKPSIIWKTSEN--KPITLG---SWKDSAVASSTLNFTRINRINMG---AYMCLADNV- 368 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a-~G~P~p~v~W~k~~~--~~~~~~---~~~~~~~~~~sL~I~~Vt~~DsG---~YtC~A~N~- 368 (902)
.+..+.+|++++|.|.+ .+.|.+.+.|+|++. ...... ..+.....+++|.|.+++.+|+| .|+|.|.|.
T Consensus 108 ~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~ 187 (395)
T 1bih_A 108 HEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAA 187 (395)
T ss_dssp EEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTT
T ss_pred cceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecc
Confidence 35667899999999996 788999999999762 211111 22334456779999999999999 999999980
Q ss_pred -C--C---------------------EEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecC
Q psy12803 369 -P--P---------------------QILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVD 424 (902)
Q Consensus 369 -~--P---------------------~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~ 424 (902)
. . .....+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......++......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~ 267 (395)
T 1bih_A 188 VDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRT 267 (395)
T ss_dssp CSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSS
T ss_pred cceEEEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecC
Confidence 0 0 001123456788999999999999999999999998876654433443322221
Q ss_pred CCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEE-EEEEEeecCCC
Q psy12803 425 KGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKG-SLILFESNAKT 471 (902)
Q Consensus 425 ~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~-s~~L~V~~~p~ 471 (902)
.+ ++|.|.+++.+|+|.|+|.|.|..|.... ++.|.|..+|.
T Consensus 268 ~~-----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~ 310 (395)
T 1bih_A 268 SG-----KRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPK 310 (395)
T ss_dssp TT-----SEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEE
T ss_pred CC-----ceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCc
Confidence 11 25999999999999999999999998765 88998886554
No 108
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.71 E-value=6.7e-17 Score=193.89 Aligned_cols=155 Identities=18% Similarity=0.248 Sum_probs=123.2
Q ss_pred eeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC------
Q psy12803 294 HIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------ 367 (902)
Q Consensus 294 ~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------ 367 (902)
.+.......+.+|++++|.|.+.+ |.+.+.|+|++..+..... ......+++|.|.+++.+|+|.|+|.|.|
T Consensus 470 ~i~~~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 547 (642)
T 1e07_A 470 SISSNNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPR-LQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANR 547 (642)
T ss_pred eEecCCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCc-EEEcCCCcEEEEeecChhcCceEEEEeEcCCCCcc
Confidence 344445577889999999999995 8899999998766543222 22223456999999999999999999998
Q ss_pred ----------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEe
Q psy12803 368 ----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 368 ----------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
.++.+...+.+..+.+|+.++|.|.+.+.|.|.+.|++++..+.. . .+|.|.
T Consensus 548 s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~------------~------~~L~i~ 609 (642)
T 1e07_A 548 SDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQH------------T------QVLFIA 609 (642)
T ss_pred CCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECcc------------C------ceEEEC
Confidence 123344455667889999999999999999999999988755421 1 139999
Q ss_pred ccCCCCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 438 NVNISDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
+++.+|+|.|+|.|.|.+|.+..++.|.|..
T Consensus 610 ~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V~v 640 (642)
T 1e07_A 610 KITPNNNGTYACFVSNLATGRNNSIVKSITV 640 (642)
T ss_pred cccccCCeEEEEEEEecccCcceeEEEEEEE
Confidence 9999999999999999999998888888763
No 109
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.71 E-value=3.4e-18 Score=188.05 Aligned_cols=166 Identities=16% Similarity=0.256 Sum_probs=124.5
Q ss_pred cEEEEcCCeEEEEEe-----cCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-------
Q psy12803 300 PIVVREGDNVRLRCV-----ATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------- 367 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~-----a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------- 367 (902)
...+.+|+++.|.|. +.+.|.+.+.|+|++..+.............+.|.|.+++.+|+|.|+|.|.|
T Consensus 129 ~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 208 (339)
T 3o4o_C 129 PQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQY 208 (339)
T ss_dssp EEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCC
T ss_pred ceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEE
Confidence 357899999999999 78899999999997766543322222222335899999999999999999987
Q ss_pred ----------------CCCEEEEcCceeeeecCceEEEEEEe---eccC-CceEEEEecCCeeeec-------CCceEEE
Q psy12803 368 ----------------VPPQILIRNRRVGVPIGRTATLECEV---EAFP-LSVRYWEFIDGTLIEH-------DGVKYSI 420 (902)
Q Consensus 368 ----------------~~P~i~~~p~~~~v~~G~~v~L~C~a---~g~P-~P~v~W~k~~~~l~~~-------~~~~~~~ 420 (902)
.+|.+...+..+.+.+|+++.|.|.+ .+.| .+.+.|++++..+... ...++..
T Consensus 209 ~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~ 288 (339)
T 3o4o_C 209 NITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEY 288 (339)
T ss_dssp EEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEEC
T ss_pred EEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEe
Confidence 14555555566678899999999999 8999 8899999887654221 1112222
Q ss_pred eecCCCceeeEeEEEEeccCCCCC-eEEEEEEEeCCceeEEEEEEEee
Q psy12803 421 SDVDKGSYQYIMQLNISNVNISDF-DTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 421 ~~~~~~s~~~~stL~I~~V~~~Ds-G~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
...+.....++|.|.+++.+|+ |.|+|.|.|.+|.+++.++|.+.
T Consensus 289 --~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 289 --SENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp --CCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC-
T ss_pred --cccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhHh
Confidence 2223233455699999999998 99999999999999888877664
No 110
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.71 E-value=3.5e-17 Score=168.35 Aligned_cols=165 Identities=15% Similarity=0.225 Sum_probs=109.7
Q ss_pred CCcEEEEcCCeEEEEEec-CCCC-CCceEEecCCC--ccc--c--------cCCccceec---cCCcEEEEeeeeecCce
Q psy12803 298 SSPIVVREGDNVRLRCVA-TGHP-KPSIIWKTSEN--KPI--T--------LGSWKDSAV---ASSTLNFTRINRINMGA 360 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a-~G~P-~p~v~W~k~~~--~~~--~--------~~~~~~~~~---~~~sL~I~~Vt~~DsG~ 360 (902)
+..+.+.+|++|+|.|.+ .+.+ .+.|.|+|++. .+. . ....+.... ...+|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 455789999999999995 4443 67999999542 110 0 001122211 22379999999999999
Q ss_pred eEEeecCCC-------------------CEEEEcCceeeeecCceEEEEEEeec-cCCc-eEEEEecCCeeeecCCceEE
Q psy12803 361 YMCLADNVP-------------------PQILIRNRRVGVPIGRTATLECEVEA-FPLS-VRYWEFIDGTLIEHDGVKYS 419 (902)
Q Consensus 361 YtC~A~N~~-------------------P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P-~v~W~k~~~~l~~~~~~~~~ 419 (902)
|+|.|.|.. |.+...+....+.+|+.++|.|.+.+ .|.+ .|.|++++..+.........
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 166 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT 166 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEEC
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecC
Confidence 999998822 22222111111235889999999998 4555 89999987665321011112
Q ss_pred EeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEE
Q psy12803 420 ISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSL 462 (902)
Q Consensus 420 ~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~ 462 (902)
.....++.+...++|.|..+..+|+|.|+|.|.|.........
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 209 (216)
T 2xzc_L 167 EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK 209 (216)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEE
T ss_pred cccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCceEE
Confidence 2233455667778999999999999999999999876544333
No 111
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.71 E-value=2.6e-17 Score=169.00 Aligned_cols=161 Identities=16% Similarity=0.266 Sum_probs=108.0
Q ss_pred cEEEEcCCeEEEEEecCCC-CCCceEEecCCC--cc--cc-cCC-----------ccce---eccCCcEEEEeeeeecCc
Q psy12803 300 PIVVREGDNVRLRCVATGH-PKPSIIWKTSEN--KP--IT-LGS-----------WKDS---AVASSTLNFTRINRINMG 359 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G~-P~p~v~W~k~~~--~~--~~-~~~-----------~~~~---~~~~~sL~I~~Vt~~DsG 359 (902)
.+.+.+|++|+|.|.+.+. |.+.|.|+|... .. +. ... .+.. ...+.+|.|.+++.+|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEA 88 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCE
Confidence 6789999999999999998 899999998421 10 00 000 1111 112346999999999999
Q ss_pred eeEEeecCC-----------------------CCEEEEcCceeeeecCceEEEEEEeec-cCCc-eEEEEecCCeeeecC
Q psy12803 360 AYMCLADNV-----------------------PPQILIRNRRVGVPIGRTATLECEVEA-FPLS-VRYWEFIDGTLIEHD 414 (902)
Q Consensus 360 ~YtC~A~N~-----------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P-~v~W~k~~~~l~~~~ 414 (902)
.|+|.|.|. +|.+...+....+..|+.++|.|.+.+ .|.+ .|.|++++..+....
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~ 168 (218)
T 3s96_B 89 IYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGV 168 (218)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC----
T ss_pred EEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCce
Confidence 999999651 222322222223346789999999998 5777 899999876664321
Q ss_pred CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEE
Q psy12803 415 GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSL 462 (902)
Q Consensus 415 ~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~ 462 (902)
... ... ...+.+...+.|.|..+..+|+|.|+|.|.|..+..+.++
T Consensus 169 ~~~-~~~-~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 169 DTS-NPT-KEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp ------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred ecC-ccc-ccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 111 111 1144555667799999999999999999999998776654
No 112
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.70 E-value=4.5e-17 Score=181.32 Aligned_cols=158 Identities=12% Similarity=0.119 Sum_probs=118.1
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCC------CCEE--
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNV------PPQI-- 372 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~------~P~i-- 372 (902)
..+.+|++++|.|.+.+.|.+.+.|+|++..+ .....+|.|.+++.+|+|.|+|.|.|. ...+
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~---------~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v 176 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSSPSVQCRSPRGKN---------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVV 176 (363)
T ss_dssp SSEESBSCEEEEEECCTTCCCCEEEECSSSCE---------EEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECE
T ss_pred eEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc---------cccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEE
Confidence 35789999999999999999999999987543 234578999999999999999999981 1111
Q ss_pred EEc---CceeeeecCceEEEEEEeec-----cCCceEEEEecCCeeeec------CCceEEEeecCCC-----ceeeEeE
Q psy12803 373 LIR---NRRVGVPIGRTATLECEVEA-----FPLSVRYWEFIDGTLIEH------DGVKYSISDVDKG-----SYQYIMQ 433 (902)
Q Consensus 373 ~~~---p~~~~v~~G~~v~L~C~a~g-----~P~P~v~W~k~~~~l~~~------~~~~~~~~~~~~~-----s~~~~st 433 (902)
... +..+.+.+|+.+.|.|.+.+ .|.|.+.|++++..+... ...++.+...... ......+
T Consensus 177 ~~~p~~~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (363)
T 1wio_A 177 LAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLH 256 (363)
T ss_dssp ECCSCSEEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCE
T ss_pred ecCCCCCCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceE
Confidence 111 14566888999999998877 889999999887665431 1222222110000 0000235
Q ss_pred EEEeccCCCCCeEEEEEEEeC--CceeEEEEEEEee
Q psy12803 434 LNISNVNISDFDTYRCISKNE--VDIAKGSLILFES 467 (902)
Q Consensus 434 L~I~~V~~~DsG~YtC~A~N~--~G~~~~s~~L~V~ 467 (902)
|.|.+++.+|+|.|+|.|.|. .|..+..+.|.|.
T Consensus 257 L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 257 LTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp EEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEE
T ss_pred EEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEE
Confidence 999999999999999999999 9999999999887
No 113
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.70 E-value=6.1e-17 Score=170.19 Aligned_cols=169 Identities=14% Similarity=0.146 Sum_probs=112.5
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCc-----eEEecCCCccccc---------------CCcc----ceeccCCcEEEEe
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPS-----IIWKTSENKPITL---------------GSWK----DSAVASSTLNFTR 352 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~-----v~W~k~~~~~~~~---------------~~~~----~~~~~~~sL~I~~ 352 (902)
.+..+.+.+|++|+|.|.+.+.|.+. |.|+|++...... .... .....+.+|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 34557899999999999999887776 9999964332100 0000 0112344699999
Q ss_pred eeeecCceeEEeecC--------------CCCEEEEcCceeeeecCceEEEEEEeec-cCCc-eEEEEecCCeeee----
Q psy12803 353 INRINMGAYMCLADN--------------VPPQILIRNRRVGVPIGRTATLECEVEA-FPLS-VRYWEFIDGTLIE---- 412 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N--------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P-~v~W~k~~~~l~~---- 412 (902)
++.+|+|.|+|.+.| .+|.+...+.. .+..|..+.|.|.+.+ .|.| .|.|++++..+..
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~ 167 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQ-VGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEI 167 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEE
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCC-ccccCCCcEEEEEEccEECCCeEEEEEECCccCCCcccc
Confidence 999999999999987 45555554432 3456788889999998 7998 9999998864321
Q ss_pred -cCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCce--eEEEEEEEe
Q psy12803 413 -HDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDI--AKGSLILFE 466 (902)
Q Consensus 413 -~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~--~~~s~~L~V 466 (902)
............++.+...++|.|..+..+|.|.|+|.|.|..+. .+.++.|.|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 168 SEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred ccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 111111233345566777788999999999999999999999886 456666666
No 114
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.70 E-value=7.6e-18 Score=193.19 Aligned_cols=163 Identities=15% Similarity=0.143 Sum_probs=107.4
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCc-cceeccCCcEEEEeeeeecCceeEEeecCCC-------CEE
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSW-KDSAVASSTLNFTRINRINMGAYMCLADNVP-------PQI 372 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~-~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~~-------P~i 372 (902)
..+.+|+.+.|.|.+.|+|.|.|+|+|++......... ....... ... ++.+|+|.|+|.|.|.. -.+
T Consensus 149 ~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~-~~~---l~~~d~G~Y~C~A~N~~G~~~~~~~~l 224 (423)
T 3qs7_E 149 YFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKE-EKV---LHELFGTDIRCCARNELGRECTRLFTI 224 (423)
T ss_dssp EEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEEC-CSE---ECCCCSSCEEEEEECSSCEEEEECEEE
T ss_pred cEeccCCceEEEEEEeeecCCeEEEEECCCCCcccccccccccccc-ceE---EecccCeEEEEEEEcCCCCcceeeEEE
Confidence 34567899999999999999999999977643211000 0000111 111 15789999999999911 011
Q ss_pred E------EcCceeeeecCceEEEEEEeec-cCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCe
Q psy12803 373 L------IRNRRVGVPIGRTATLECEVEA-FPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFD 445 (902)
Q Consensus 373 ~------~~p~~~~v~~G~~v~L~C~a~g-~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG 445 (902)
. ..+....+.+|+++.|.|.+.+ .|.|.|.|++++..+........... .........++|.|.+++.+|+|
T Consensus 225 ~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G 303 (423)
T 3qs7_E 225 DLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTY-STNRTMIRILFAFVSSVARNDTG 303 (423)
T ss_dssp ESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEE-ETTTEEEEEEEEEESSCCTTTCE
T ss_pred EEecCCccCCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccc-cCCceeEEEEEEEEeecCHHHCE
Confidence 1 1234567899999999999999 67799999999887643211111111 11112233456999999999999
Q ss_pred EEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 446 TYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 446 ~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.|+|.|.|. .+.++.|.|..++.
T Consensus 304 ~Y~C~A~N~---~~~~~~L~V~~~p~ 326 (423)
T 3qs7_E 304 YYTCSSSKH---PSQSALVTIVEKGF 326 (423)
T ss_dssp EEEEEETTE---EEEEEEEEEESSCE
T ss_pred EEEEEEecC---CCceEEEEEEeCCc
Confidence 999999998 77788888876654
No 115
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.70 E-value=7e-18 Score=183.31 Aligned_cols=158 Identities=16% Similarity=0.222 Sum_probs=116.7
Q ss_pred cEEEEcCCeEEEEEecCCCC-CCceEEecCCCcccc-cCCccceeccCCcEEEEeeeeecCceeEEeecC--------CC
Q psy12803 300 PIVVREGDNVRLRCVATGHP-KPSIIWKTSENKPIT-LGSWKDSAVASSTLNFTRINRINMGAYMCLADN--------VP 369 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G~P-~p~v~W~k~~~~~~~-~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N--------~~ 369 (902)
.+.+.+|+++.|.|.+.+.| .+.|.|+|++..... ..........+++|.|.+++.+|+|.|+|.|.| ..
T Consensus 14 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 93 (315)
T 1itb_B 14 ILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKIS 93 (315)
T ss_dssp CCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEECC
T ss_pred EEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEEEE
Confidence 46799999999999999977 889999998764321 122223334466999999999999999999998 11
Q ss_pred CEEEE-cC---------ceeeeecCceEEEEEEe------eccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeE
Q psy12803 370 PQILI-RN---------RRVGVPIGRTATLECEV------EAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQ 433 (902)
Q Consensus 370 P~i~~-~p---------~~~~v~~G~~v~L~C~a------~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~st 433 (902)
..+.. .+ ....+.+|+++.|.|.+ .+.|.+.+.|++++..+... ..++... . .+
T Consensus 94 v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~-~~~~~~~---~------~~ 163 (315)
T 1itb_B 94 AKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLD-NIHFSGV---K------DR 163 (315)
T ss_dssp CEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCC-SSSEEEE---T------TE
T ss_pred EEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCc-cceEeec---C------ce
Confidence 11111 11 12567889999999998 89999999999988766432 2232221 1 24
Q ss_pred EEEeccCCCCCeEEEEEEE-eCCcee---EEEEEEEee
Q psy12803 434 LNISNVNISDFDTYRCISK-NEVDIA---KGSLILFES 467 (902)
Q Consensus 434 L~I~~V~~~DsG~YtC~A~-N~~G~~---~~s~~L~V~ 467 (902)
|.|.+++.+|+|.|+|.|. |..|.. ...+.|.+.
T Consensus 164 L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~ 201 (315)
T 1itb_B 164 LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITL 201 (315)
T ss_dssp EEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred EEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEe
Confidence 9999999999999999999 888877 455555554
No 116
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.70 E-value=2.4e-17 Score=168.67 Aligned_cols=161 Identities=14% Similarity=0.213 Sum_probs=113.2
Q ss_pred cEEEEcCCeEEEEEecCCCCCCceEEecCC--Ccccc-c---------CCccce---eccCCcEEEEeeeeecCceeEEe
Q psy12803 300 PIVVREGDNVRLRCVATGHPKPSIIWKTSE--NKPIT-L---------GSWKDS---AVASSTLNFTRINRINMGAYMCL 364 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~--~~~~~-~---------~~~~~~---~~~~~sL~I~~Vt~~DsG~YtC~ 364 (902)
.+.+.+|++|+|.|.+. |.+.+.|+|.+ ..+.. . ...+.. ...+.+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 57899999999999999 88999999942 22110 0 001111 12234799999999999999999
Q ss_pred ecC--------------------CCCEEEEcCceeeeecCceEEEEEEeecc--CCceEEEEecCCeeeecCCceEEEee
Q psy12803 365 ADN--------------------VPPQILIRNRRVGVPIGRTATLECEVEAF--PLSVRYWEFIDGTLIEHDGVKYSISD 422 (902)
Q Consensus 365 A~N--------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~--P~P~v~W~k~~~~l~~~~~~~~~~~~ 422 (902)
|.| .+|.+...+....+.+|+.++|.|.+.+. |.+.+.|++++..+.. .........
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~-~~~~~~~~~ 165 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKA-GVETTTPSK 165 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECT-TEEECCCEE
T ss_pred EecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCC-CcccCCceE
Confidence 977 13344433333334469999999999986 3578999988766532 111111122
Q ss_pred cCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEE
Q psy12803 423 VDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLI 463 (902)
Q Consensus 423 ~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~ 463 (902)
...+.+...++|.|.++..+|+|.|+|.|.|..+..+.++.
T Consensus 166 ~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 166 QSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp CTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEEC
T ss_pred CCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeecc
Confidence 34456667788999999999999999999999987776654
No 117
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.70 E-value=5.8e-17 Score=199.96 Aligned_cols=164 Identities=23% Similarity=0.346 Sum_probs=132.5
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC---------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN--------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N--------- 367 (902)
.+....+.+|++++|.|.+.+.|.+.++|+|++..+. ..+..|.|.+++.+|+|.|+|.|.|
T Consensus 349 ~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~---------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 419 (816)
T 3dmk_A 349 DPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIG---------HSESVLRIESVKKEDKGMYQCFVRNDRESAEASA 419 (816)
T ss_dssp ESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECS---------CCSSEEEESSCCGGGCEEEEEEEECSSCEEEECC
T ss_pred CCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECC---------CCCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEE
Confidence 4566788999999999999999999999999765432 1246899999999999999999998
Q ss_pred --------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEecc
Q psy12803 368 --------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 368 --------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V 439 (902)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+..............++ ...++|.|.++
T Consensus 420 ~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~--~~~~~L~i~~v 497 (816)
T 3dmk_A 420 ELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNG--DVVSYLNITSV 497 (816)
T ss_dssp EEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTS--CEEEEEEESSC
T ss_pred EEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCC--CcEEEEEEeec
Confidence 36677776777788999999999999999999999999877664333222211111111 23467999999
Q ss_pred CCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 440 NISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
+.+|+|.|+|.|.|..|....++.|.|..++.
T Consensus 498 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 529 (816)
T 3dmk_A 498 HANDGGLYKCIAKSKVGVAEHSAKLNVYGLPY 529 (816)
T ss_dssp CTTTCEEEEEEEEETTEEEEEEEEEEECSSCE
T ss_pred cccCCEEEEEEEEECCCeEEEEEEEEEecCCe
Confidence 99999999999999999999999999987654
No 118
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.70 E-value=6.8e-17 Score=177.07 Aligned_cols=159 Identities=14% Similarity=0.197 Sum_probs=113.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCC-CCCceEEecCCCccc---ccCC----cccee--------ccCCcEEEEeeeeecCce
Q psy12803 297 SSSPIVVREGDNVRLRCVATGH-PKPSIIWKTSENKPI---TLGS----WKDSA--------VASSTLNFTRINRINMGA 360 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~-P~p~v~W~k~~~~~~---~~~~----~~~~~--------~~~~sL~I~~Vt~~DsG~ 360 (902)
.+.++.+.+|++++|.|.+.+. |.+.|.|+|++.... .... .+... ....+|.|.+++.+|+|.
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 88 (327)
T 2wng_A 9 PDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGT 88 (327)
T ss_dssp CCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEE
T ss_pred CCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeE
Confidence 4566889999999999999997 889999999875421 0000 01111 334589999999999999
Q ss_pred eEEeecCC-CC----------EEEE--c-------CceeeeecCceEEEEEEeeccCCc--eEEEEecCCeeeecCCceE
Q psy12803 361 YMCLADNV-PP----------QILI--R-------NRRVGVPIGRTATLECEVEAFPLS--VRYWEFIDGTLIEHDGVKY 418 (902)
Q Consensus 361 YtC~A~N~-~P----------~i~~--~-------p~~~~v~~G~~v~L~C~a~g~P~P--~v~W~k~~~~l~~~~~~~~ 418 (902)
|+|.|.|. .. .+.+ . .....+.+|+.+.|.|.+.+.|++ .+.|++++..+... ...
T Consensus 89 Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~--~~~ 166 (327)
T 2wng_A 89 YYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDF--QTN 166 (327)
T ss_dssp EEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCE--EEE
T ss_pred EEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcccc--ccc
Confidence 99999871 10 1111 1 112457889999999999998876 89999987665322 112
Q ss_pred EEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCce
Q psy12803 419 SISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDI 457 (902)
Q Consensus 419 ~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~ 457 (902)
.......+.+...++|.|.....+|.|.|+|.|.|..+.
T Consensus 167 ~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 167 VDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp EECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred cccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 222234455666778999988888889999999999876
No 119
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.70 E-value=1.1e-18 Score=213.31 Aligned_cols=163 Identities=21% Similarity=0.325 Sum_probs=0.0
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccce----------------e--c---cCCcEEEEeeeeecCc
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDS----------------A--V---ASSTLNFTRINRINMG 359 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~----------------~--~---~~~sL~I~~Vt~~DsG 359 (902)
..+.+|+++.|.|.+.+.|.+.+.|+|++..+......... . . ...+|.|.+++.+|+|
T Consensus 559 ~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 638 (772)
T 3v2a_R 559 MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQG 638 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCc
Confidence 45789999999999999999999999987665432211100 0 0 1125999999999999
Q ss_pred eeEEeecC------------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEe
Q psy12803 360 AYMCLADN------------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSIS 421 (902)
Q Consensus 360 ~YtC~A~N------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~ 421 (902)
.|+|.|.| .+|.|...+.++.+.+|++++|.|.+.|.|.|.|.|++++..+..... +.+.
T Consensus 639 ~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~--~~~~ 716 (772)
T 3v2a_R 639 DYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSG--IVLK 716 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCC--eEEc
Confidence 99999998 356666666677889999999999999999999999998877754332 2221
Q ss_pred ecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 422 DVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 422 ~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
. . .++|.|.+++.+|+|.|+|.|.|.+|.++.++.|.|..+|..
T Consensus 717 ~-~------~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~ 760 (772)
T 3v2a_R 717 D-G------NRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEK 760 (772)
T ss_dssp ---------------------------------------------------
T ss_pred C-C------CcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCCc
Confidence 1 1 235999999999999999999999999999999999887654
No 120
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.70 E-value=1.5e-16 Score=188.44 Aligned_cols=168 Identities=16% Similarity=0.253 Sum_probs=122.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCce----EEec--CCC--cccccC-------Cccceec---cCC--cEEEEeeeee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSI----IWKT--SEN--KPITLG-------SWKDSAV---ASS--TLNFTRINRI 356 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v----~W~k--~~~--~~~~~~-------~~~~~~~---~~~--sL~I~~Vt~~ 356 (902)
.+..+.+.+|+++.|.|.+.+.|.+.+ +|+| ++. .+.... ..+.... .++ +|.|.+++.+
T Consensus 337 ~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~ 416 (585)
T 2ocw_A 337 SPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSR 416 (585)
T ss_pred CCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChh
Confidence 346678999999999999999999987 7999 665 332211 1122221 233 3999999999
Q ss_pred cCceeEEeecC---------------CCCEEEEcCceeeeecCceEEEEEEee----ccCCceEEEEecCCeeeecCCce
Q psy12803 357 NMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTATLECEVE----AFPLSVRYWEFIDGTLIEHDGVK 417 (902)
Q Consensus 357 DsG~YtC~A~N---------------~~P~i~~~p~~~~v~~G~~v~L~C~a~----g~P~P~v~W~k~~~~l~~~~~~~ 417 (902)
|+|.|+|.| | .+|.+. .+..+.+.+|+++.|.|.+. +.|.|.|.|++++..+.......
T Consensus 417 D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~-~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~ 494 (585)
T 2ocw_A 417 DAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLK-VPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEG 494 (585)
T ss_pred hCEEEEEcc-cCCCccceeEEEEEecCccccc-cCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCC
Confidence 999999999 6 123333 25667899999999999997 77889999999988775432211
Q ss_pred ----EEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeE-EEEEEEeecCC
Q psy12803 418 ----YSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAK-GSLILFESNAK 470 (902)
Q Consensus 418 ----~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~-~s~~L~V~~~p 470 (902)
+... ... ...++|.|.+++.+|+|.|+|.|.|..|... ..+.|.|..++
T Consensus 495 ~~~~~~~~-~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 495 PSKAFVNC-DEN---SRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred CCcceEEe-cCc---ccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 1111 111 1235699999999999999999999999765 44889998765
No 121
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.70 E-value=4.7e-17 Score=167.77 Aligned_cols=165 Identities=15% Similarity=0.223 Sum_probs=111.3
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC--CCceEEecCC--Cccccc---------------CCccceec-----cCCcEEEE
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSE--NKPITL---------------GSWKDSAV-----ASSTLNFT 351 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~--~~~~~~---------------~~~~~~~~-----~~~sL~I~ 351 (902)
..+..+.+.+|++|+|.|.+.+.| .+.|.|+|++ ..+... ...+.... .+.+|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (219)
T 1c1e_H 5 VQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQIN 84 (219)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEEC
T ss_pred eCCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEEC
Confidence 345668899999999999999865 6889999974 222100 01122221 23589999
Q ss_pred eeeeecCceeEEeecCCC----------------------CEEEEcCceeeeecCceEEEEEEeec-cCCc-eEEEEecC
Q psy12803 352 RINRINMGAYMCLADNVP----------------------PQILIRNRRVGVPIGRTATLECEVEA-FPLS-VRYWEFID 407 (902)
Q Consensus 352 ~Vt~~DsG~YtC~A~N~~----------------------P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P-~v~W~k~~ 407 (902)
+++.+|+|.|+|.|.|.. |.+...+....+.+|+.++|.|.+.+ .|.| .|.|++++
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 164 (219)
T 1c1e_H 85 NLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 164 (219)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCC
Confidence 999999999999997721 22222222223567999999999998 8999 99999887
Q ss_pred CeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12803 408 GTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILF 465 (902)
Q Consensus 408 ~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~ 465 (902)
..+......... . .+.+...++|.|.. ...|.|.|+|.|.|..+.......|.
T Consensus 165 ~~~~~~~~~~~~---~-~~~~~~~s~L~i~~-~~~d~g~Y~C~a~n~~~~~~~~~~i~ 217 (219)
T 1c1e_H 165 LSSGVHTFPAVL---Q-SDLYTLSSSVTVPS-SPRPSETVTCNVAHPASSTKVDKKIV 217 (219)
T ss_dssp BCTTEEECCCEE---S-SSCEEEEEEEEEES-SSTTTSCCEEEEEEGGGTEEEEEECC
T ss_pred cccceEecCCcc---c-CCeEEEEEEEEEec-ccCCCCEEEEEEEeCCCCccEEEecC
Confidence 653111111111 1 14455667899954 44466999999999998776665553
No 122
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.70 E-value=7e-17 Score=193.72 Aligned_cols=184 Identities=23% Similarity=0.295 Sum_probs=132.8
Q ss_pred cccccccccCCCCCCCCcccccCCcccCCceeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec
Q psy12803 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV 343 (902)
Q Consensus 264 ~c~~kN~scs~~s~~~~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~ 343 (902)
.|.+.|..+...+....+.+..+|... ...+....+.+|++++|.|.+.+.|.+.++|+|++..+.
T Consensus 358 ~C~a~n~~g~~~s~~~~l~V~~~p~~~----~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~---------- 423 (642)
T 1e07_A 358 ECGIQNELSVDHSDPVILNVLYGPDDP----TISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQ---------- 423 (642)
T ss_pred EEEEeCCCCCcceeeEEEEEEcCCCCC----eecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcC----------
Confidence 466666555433333344444444321 223456788999999999999999999999999765432
Q ss_pred cCCcEEEEeeeeecCceeEEeecC-------------------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEE
Q psy12803 344 ASSTLNFTRINRINMGAYMCLADN-------------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWE 404 (902)
Q Consensus 344 ~~~sL~I~~Vt~~DsG~YtC~A~N-------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~ 404 (902)
....|.|.+++.+|+|.|+|.|.| .+|.+.. .....+.+|++++|.|.+.+ |.+.+.|+
T Consensus 424 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~~~i~W~ 501 (642)
T 1e07_A 424 HTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISS-NNSKPVEDKDAVAFTCEPEA-QNTTYLWW 501 (642)
T ss_pred CCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEec-CCceeecCCCeEEEEEECCC-CCcEEEEE
Confidence 245799999999999999999998 0222222 23456779999999999994 88999999
Q ss_pred ecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeE-EEEEEEeecCCCC
Q psy12803 405 FIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAK-GSLILFESNAKTP 472 (902)
Q Consensus 405 k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~-~s~~L~V~~~p~~ 472 (902)
+++..+... .++.+... . .+|.|.+++.+|+|.|+|.|.|..|... ..+.|.|...|..
T Consensus 502 ~~g~~l~~~--~~~~~~~~-~------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~ 561 (642)
T 1e07_A 502 VNGQSLPVS--PRLQLSNG-N------RTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDT 561 (642)
T ss_pred ECCEeCCCC--CcEEEcCC-C------cEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCc
Confidence 988776432 23333221 1 2499999999999999999999999864 4688888866543
No 123
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.70 E-value=3e-18 Score=175.65 Aligned_cols=158 Identities=20% Similarity=0.269 Sum_probs=109.6
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCC-cccc-----------cCCccceec---cCCcEEEEeeeeecCceeE
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN-KPIT-----------LGSWKDSAV---ASSTLNFTRINRINMGAYM 362 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~-~~~~-----------~~~~~~~~~---~~~sL~I~~Vt~~DsG~Yt 362 (902)
+..+.+.+|++|+|.|.+.+.|.+.|.|+|++. ..+. ....+.... ...+|.|.+++.+|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 566889999999999999998888999998542 1110 001111111 2238999999999999999
Q ss_pred EeecC---------------------CCCEEEEcCceeeeecCceEEEEEEeecc-CC-ceEEEEecCCeeeecCCceEE
Q psy12803 363 CLADN---------------------VPPQILIRNRRVGVPIGRTATLECEVEAF-PL-SVRYWEFIDGTLIEHDGVKYS 419 (902)
Q Consensus 363 C~A~N---------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k~~~~l~~~~~~~~~ 419 (902)
|.|.| .+|.+...+....+.+|+.++|.|.+.+. |. +.|.|++++..+... .....
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~-~~~~~ 164 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDG-VKTTK 164 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSS-CBCCC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCC-eecCC
Confidence 99983 12333322222234579999999999987 55 799999987666432 11111
Q ss_pred EeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCce
Q psy12803 420 ISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDI 457 (902)
Q Consensus 420 ~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~ 457 (902)
.....++ +...++|.|.+++.+|+|.|+|.|.|..+.
T Consensus 165 ~~~~~~~-~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 165 PSKQGQN-YMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp CBCSSSC-EEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred ceecCCC-ceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 1122233 555678999999999999999999998765
No 124
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.69 E-value=1.3e-17 Score=171.69 Aligned_cols=144 Identities=21% Similarity=0.303 Sum_probs=103.6
Q ss_pred EEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCC---CCEEEEc----
Q psy12803 303 VREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNV---PPQILIR---- 375 (902)
Q Consensus 303 v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~---~P~i~~~---- 375 (902)
+.+|++|+|.|.+ |.+.|+|+|++..+... ...+++|.|.+++.+|+|.|+|.+.+. ...+...
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~~~~v~v~~~~~ 85 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL------TEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMGSA 85 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE------ESSCCCEEEEEGGGCCEEEEEEESSSSCCCCEEEEEEC---
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC------CCCCCeEEeCCCCcCCCEEEEEEecCCCCeeEEEEEEEecc
Confidence 3589999999999 78899999977554221 124568999999999999999998761 1111100
Q ss_pred ---------------------------------Cceeeee-cCceEEEEEEeeccCCceEEEEecCCeeeecCC-ceEEE
Q psy12803 376 ---------------------------------NRRVGVP-IGRTATLECEVEAFPLSVRYWEFIDGTLIEHDG-VKYSI 420 (902)
Q Consensus 376 ---------------------------------p~~~~v~-~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~-~~~~~ 420 (902)
.....+. +|++++|.|. +.|.|.+.|++++..+..... ..+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~ 163 (204)
T 1sy6_A 86 DDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGS 163 (204)
T ss_dssp ---------------------------------CCCCEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEE
T ss_pred ccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEec
Confidence 0112244 8999999998 889999999998876643222 11111
Q ss_pred eecCCCceeeEeEEEEecc-CCCCCeEEEEEEEeCCcee-EEEEEEEe
Q psy12803 421 SDVDKGSYQYIMQLNISNV-NISDFDTYRCISKNEVDIA-KGSLILFE 466 (902)
Q Consensus 421 ~~~~~~s~~~~stL~I~~V-~~~DsG~YtC~A~N~~G~~-~~s~~L~V 466 (902)
. . .+|.|.+| +.+|+|.|+|.|.|..|.. +..+.|.|
T Consensus 164 -~--~------~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 164 -D--E------DHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp -E--T------TEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred -C--C------CEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 1 2 24999999 9999999999999999963 55555554
No 125
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.69 E-value=3.4e-17 Score=165.66 Aligned_cols=131 Identities=16% Similarity=0.234 Sum_probs=97.5
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEe-eeeecCceeEEeecCC--CCEEE--E-
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTR-INRINMGAYMCLADNV--PPQIL--I- 374 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~-Vt~~DsG~YtC~A~N~--~P~i~--~- 374 (902)
..+.+|++++|.|.+.+ +. .|+|+|++..+... .+++|.|.+ ++.+|+|.|+|.|.|. ..... .
T Consensus 9 ~v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~--------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK--------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EEEEETTEEEEECSSCC-CT-TCEEEETTEEECSC--------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred EEEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC--------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 34578999999999998 43 49999977654321 345899999 9999999999999981 00000 0
Q ss_pred -----cC--------------------------ce---eeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEE
Q psy12803 375 -----RN--------------------------RR---VGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSI 420 (902)
Q Consensus 375 -----~p--------------------------~~---~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~ 420 (902)
.+ .. ..+.+|+++.|.|.+ |.|.|.|++++..+.....
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~----- 150 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA----- 150 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC-----
T ss_pred EecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC-----
Confidence 00 00 123489999999988 8899999998876542111
Q ss_pred eecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee
Q psy12803 421 SDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA 458 (902)
Q Consensus 421 ~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~ 458 (902)
.. .+|.|.+++.+|+|.|+|+|.|..|..
T Consensus 151 ---~~------~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 ---TK------NTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp ---CS------SCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred ---Cc------ceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 12 239999999999999999999999876
No 126
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.69 E-value=4.6e-17 Score=181.28 Aligned_cols=153 Identities=16% Similarity=0.207 Sum_probs=118.0
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccC------------Ccccee------ccCCcEEEEeeeeecCceeE
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLG------------SWKDSA------VASSTLNFTRINRINMGAYM 362 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~------------~~~~~~------~~~~sL~I~~Vt~~DsG~Yt 362 (902)
+.+.+|++++|.|.+.+.|.+.|.|+|++..++... ..+... ....+|.|.+++.+|+|.|+
T Consensus 4 v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 83 (363)
T 1wio_A 4 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 83 (363)
T ss_dssp EEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEEE
T ss_pred EEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEEE
Confidence 678999999999999999999999999876432110 111111 13568999999999999999
Q ss_pred EeecCCC-------CEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEE
Q psy12803 363 CLADNVP-------PQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLN 435 (902)
Q Consensus 363 C~A~N~~-------P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~ 435 (902)
|.|.|.. ..+...+ ...+.+|++++|.|.+.+.|.|.+.|++++..+.. . ..+|.
T Consensus 84 C~~~n~~~~~~l~V~~~~~~~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~-----------~------~~~L~ 145 (363)
T 1wio_A 84 CEVEDQKEEVQLLVFGLTANS-DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ-----------G------GKTLS 145 (363)
T ss_dssp EEETTEEEEEEEEEEEEEESS-CSSEESBSCEEEEEECCTTCCCCEEEECSSSCEEE-----------E------SSEEE
T ss_pred EEEEECCCcEEEEEEeCCCCC-ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccc-----------c------ceEEE
Confidence 9999911 0122223 34688999999999999999999999988765421 1 12499
Q ss_pred EeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 436 ISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 436 I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
|.+++.+|+|.|+|.|.|..+....++.|.|..++.
T Consensus 146 i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~ 181 (363)
T 1wio_A 146 VSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 181 (363)
T ss_dssp ECSBCGGGCEECEEEEEETTEEEEECCEECEECCSC
T ss_pred EeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCC
Confidence 999999999999999999988888888888875544
No 127
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.69 E-value=8e-17 Score=188.34 Aligned_cols=169 Identities=16% Similarity=0.220 Sum_probs=122.0
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCC--ccc--cc--------CCccceec---cCCcEEEEeeeeecCce
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN--KPI--TL--------GSWKDSAV---ASSTLNFTRINRINMGA 360 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~--~~~--~~--------~~~~~~~~---~~~sL~I~~Vt~~DsG~ 360 (902)
..+..+.+.+|++++|.|.+.+.|.+.|.|+|++. .+. .. ...+.... ...+|.|.+++.+|+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 84 (523)
T 2rcj_C 5 TQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESD 84 (523)
T ss_pred ccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEE
Confidence 34566889999999999999999999999999752 111 00 01122211 12379999999999999
Q ss_pred eEEeecC---------------------CCCEEEEcCceeeeecCceEEEEEEeeccCCc--eEEEEecCCeeeecCCce
Q psy12803 361 YMCLADN---------------------VPPQILIRNRRVGVPIGRTATLECEVEAFPLS--VRYWEFIDGTLIEHDGVK 417 (902)
Q Consensus 361 YtC~A~N---------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P--~v~W~k~~~~l~~~~~~~ 417 (902)
|+|.|.| .+|.+...+....+.+|+.+.|.|.+.+.|++ .|.|++++..+... ..
T Consensus 85 Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~--~~ 162 (523)
T 2rcj_C 85 YYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAG--VE 162 (523)
T ss_pred EEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCc--eE
Confidence 9999987 12344444444556689999999999998764 89999988766421 11
Q ss_pred EE-EeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12803 418 YS-ISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFE 466 (902)
Q Consensus 418 ~~-~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V 466 (902)
+. ......+.+...++|.|.+++.+|+|.|+|.|.|..+....++.+.+
T Consensus 163 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~ 212 (523)
T 2rcj_C 163 TTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE 212 (523)
T ss_pred eccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeee
Confidence 11 11233455556678999999999999999999999988776666543
No 128
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.69 E-value=9.5e-17 Score=173.96 Aligned_cols=167 Identities=18% Similarity=0.214 Sum_probs=115.9
Q ss_pred CcEEEEcCCeEEEEEecCC-CCCCceEEecCCCccccc---------------CCccce----eccCCcEEEEeeeeecC
Q psy12803 299 SPIVVREGDNVRLRCVATG-HPKPSIIWKTSENKPITL---------------GSWKDS----AVASSTLNFTRINRINM 358 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G-~P~p~v~W~k~~~~~~~~---------------~~~~~~----~~~~~sL~I~~Vt~~Ds 358 (902)
..+++.+|++|+|.|.+.+ .+.+.|+|+|++...... ...+.. ...+.+|.|.+++.+|+
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 3477899999999999875 455679999976542210 001111 12345899999999999
Q ss_pred ceeEEeecC---------------CCCEE--EEcCceeeeecCceEEEEEEe-eccCCceEEEEecCCeeeecCCceEEE
Q psy12803 359 GAYMCLADN---------------VPPQI--LIRNRRVGVPIGRTATLECEV-EAFPLSVRYWEFIDGTLIEHDGVKYSI 420 (902)
Q Consensus 359 G~YtC~A~N---------------~~P~i--~~~p~~~~v~~G~~v~L~C~a-~g~P~P~v~W~k~~~~l~~~~~~~~~~ 420 (902)
|.|+|.|.| ..|.+ ...+.......|+.+.|.|.+ .+.|.|.|.|++++..+....
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~------ 160 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTT------ 160 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEE------
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCccccccc------
Confidence 999999976 22222 223344445678899999975 689999999999887663311
Q ss_pred eecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee--EEEEEEEeecCCC
Q psy12803 421 SDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA--KGSLILFESNAKT 471 (902)
Q Consensus 421 ~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~--~~s~~L~V~~~p~ 471 (902)
...........+.|.|..+..+|+|.|+|.|.|..+.. +.++.|.|..+|.
T Consensus 161 ~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~ 213 (308)
T 4fom_A 161 TSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPE 213 (308)
T ss_dssp EECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEE
T ss_pred ceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCe
Confidence 11223334456779999999999999999999988765 4555665655443
No 129
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.69 E-value=1.6e-16 Score=166.99 Aligned_cols=168 Identities=18% Similarity=0.219 Sum_probs=113.3
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCCc--c--c-------------ccCCccceecc-----CCcEEE
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSENK--P--I-------------TLGSWKDSAVA-----SSTLNF 350 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~~--~--~-------------~~~~~~~~~~~-----~~sL~I 350 (902)
+..+..+.+.+|++|+|.|.+.+.| .+.|.|+|.+.. + + .....+..... ..+|+|
T Consensus 6 v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 85 (247)
T 2ghw_B 6 LVQSGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQM 85 (247)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred EEecCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEE
Confidence 3345568899999999999999987 688999985321 1 0 00111222211 237999
Q ss_pred EeeeeecCceeEEeecCC-------------------------------CCEEEEcCceeeeecCceEEEEEEeeccCCc
Q psy12803 351 TRINRINMGAYMCLADNV-------------------------------PPQILIRNRRVGVPIGRTATLECEVEAFPLS 399 (902)
Q Consensus 351 ~~Vt~~DsG~YtC~A~N~-------------------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P 399 (902)
.+++.+|+|.|+|.|.|. ++.+...+..+.+.+|++++|.|.+.+.|.+
T Consensus 86 ~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~ 165 (247)
T 2ghw_B 86 NSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRS 165 (247)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTT
T ss_pred CcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccc
Confidence 999999999999999772 1223334556678899999999999999999
Q ss_pred eEEEEe--cCCeee--e--------cCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee-EEEEEEEe
Q psy12803 400 VRYWEF--IDGTLI--E--------HDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA-KGSLILFE 466 (902)
Q Consensus 400 ~v~W~k--~~~~l~--~--------~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~-~~s~~L~V 466 (902)
.+.|++ ++..+. . ....++.+.... ...+|.|.+++.+|+|.|+|.|.|..... .....|.|
T Consensus 166 ~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V 240 (247)
T 2ghw_B 166 NLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSG-----TDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEV 240 (247)
T ss_dssp CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSS-----SEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred eEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCC-----CeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEE
Confidence 999998 333221 0 011223222111 13469999999999999999999864433 23445555
Q ss_pred e
Q psy12803 467 S 467 (902)
Q Consensus 467 ~ 467 (902)
.
T Consensus 241 ~ 241 (247)
T 2ghw_B 241 K 241 (247)
T ss_dssp C
T ss_pred C
Confidence 4
No 130
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.69 E-value=5.8e-17 Score=166.15 Aligned_cols=161 Identities=16% Similarity=0.216 Sum_probs=111.2
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--ccc---cc-----------CCccceec-----cCCcEEEEee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KPI---TL-----------GSWKDSAV-----ASSTLNFTRI 353 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~~---~~-----------~~~~~~~~-----~~~sL~I~~V 353 (902)
.+..+.+.+|++|+|.|.+.+.| .+.|.|+|++. .+. .. ...+.... .+.+|.|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 85 (210)
T 3d9a_H 6 ESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSV 85 (210)
T ss_dssp EESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCC
Confidence 45567899999999999999865 48999998631 110 00 01122221 1238999999
Q ss_pred eeecCceeEEeecC-----------------CCCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCeeeecC
Q psy12803 354 NRINMGAYMCLADN-----------------VPPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGTLIEHD 414 (902)
Q Consensus 354 t~~DsG~YtC~A~N-----------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~l~~~~ 414 (902)
+.+|+|.|+|.+.| .+|.+...+....+.+|+.++|.|.+.+. |.| .|.|++++..+....
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 165 (210)
T 3d9a_H 86 TTEDTATYYCANWDGDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT 165 (210)
T ss_dssp CGGGCEEEEEEETTSSCBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred CcccCEEEEEEEecCcccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEE
Confidence 99999999999987 12333332222345689999999999987 888 999988876432111
Q ss_pred CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEE
Q psy12803 415 GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSL 462 (902)
Q Consensus 415 ~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~ 462 (902)
..... .. +.+...++|.|.++..+| |.|+|.|.|..|......
T Consensus 166 ~~~~~--~~--~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 208 (210)
T 3d9a_H 166 FPAVL--QS--DLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 208 (210)
T ss_dssp CCCEE--ET--TEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cCCcc--CC--CcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccccc
Confidence 11111 11 445556789999999877 999999999998875543
No 131
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.69 E-value=1.6e-16 Score=165.73 Aligned_cols=155 Identities=18% Similarity=0.220 Sum_probs=106.7
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCC--ccc-------------ccCCccceec----cCCcEEEEeeeeec
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN--KPI-------------TLGSWKDSAV----ASSTLNFTRINRIN 357 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~--~~~-------------~~~~~~~~~~----~~~sL~I~~Vt~~D 357 (902)
.+..+.+.+|++|+|.|. .+.|.+.|.|+|++. .+. .....+.... ...+|+|.+++.+|
T Consensus 6 ~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 84 (238)
T 2p1y_A 6 SPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQ 84 (238)
T ss_dssp ECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGG
T ss_pred CccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCccc
Confidence 456688999999999999 778899999999521 110 0001122221 23479999999999
Q ss_pred CceeEEeecCC--------------------CC-----------EEEEcCceeeeecCceEEEEEEeeccCCceEEEEec
Q psy12803 358 MGAYMCLADNV--------------------PP-----------QILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFI 406 (902)
Q Consensus 358 sG~YtC~A~N~--------------------~P-----------~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~ 406 (902)
+|.|+|.|.|. ++ .+...+..+.+.+|++++|.|.+.+.|.+.+.|+++
T Consensus 85 sG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~ 164 (238)
T 2p1y_A 85 TSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQ 164 (238)
T ss_dssp CEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEE
T ss_pred CeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEE
Confidence 99999999861 00 233334556788999999999999999999999986
Q ss_pred CC----eeee--------cCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCC
Q psy12803 407 DG----TLIE--------HDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEV 455 (902)
Q Consensus 407 ~~----~l~~--------~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~ 455 (902)
+. ..+. ....++.+...... ...+|.|.+++.+|+|.|+|.|.|..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 165 FPGEGPALLISILSVSDKKEDGRFTIFFNKRE---KKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CTTSCCEEEEEEETTCSEEEETTEEEEEETTT---TEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCCCCCEEEEEEccCCCcccCCceEEEecCCC---CeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 42 1110 00112222111111 13569999999999999999999984
No 132
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.69 E-value=7.2e-17 Score=170.60 Aligned_cols=162 Identities=15% Similarity=0.290 Sum_probs=111.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC-----CCceEEecCCCc--c--cc--------cCCccceec---cCCcEEEEeeeee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP-----KPSIIWKTSENK--P--IT--------LGSWKDSAV---ASSTLNFTRINRI 356 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P-----~p~v~W~k~~~~--~--~~--------~~~~~~~~~---~~~sL~I~~Vt~~ 356 (902)
.+..+.+.+|++|+|.|.+.+.| .+.|.|+|++.. + +. ....+.... .+.+|+|.+++.+
T Consensus 40 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 119 (252)
T 3bkj_L 40 TPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAE 119 (252)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcc
Confidence 46778899999999999999987 689999996521 1 00 001122222 1238999999999
Q ss_pred cCceeEEeecCC------------------CCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCeeeecCCc
Q psy12803 357 NMGAYMCLADNV------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGTLIEHDGV 416 (902)
Q Consensus 357 DsG~YtC~A~N~------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~l~~~~~~ 416 (902)
|+|.|+|.|.|. +|.+...+....+.+|+.++|.|.+.+. |.+ .|.|++++..+......
T Consensus 120 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 199 (252)
T 3bkj_L 120 DLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLN 199 (252)
T ss_dssp GCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEE
T ss_pred cCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeee
Confidence 999999999881 2333332222223468999999999984 554 79999987665321011
Q ss_pred eEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee
Q psy12803 417 KYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA 458 (902)
Q Consensus 417 ~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~ 458 (902)
........++.+...++|.|.++..+|+|.|+|.|.|.....
T Consensus 200 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 200 SWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred ecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 111222344566677889999999999999999999987654
No 133
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.69 E-value=3.4e-17 Score=178.90 Aligned_cols=162 Identities=18% Similarity=0.302 Sum_probs=119.5
Q ss_pred cCCcEEEEcC---CeEEEEEe-cCCCCCCceEEecCCCcccccCC---ccceeccCCcEEEEeeeeecCceeEEeecC--
Q psy12803 297 SSSPIVVREG---DNVRLRCV-ATGHPKPSIIWKTSENKPITLGS---WKDSAVASSTLNFTRINRINMGAYMCLADN-- 367 (902)
Q Consensus 297 ~~~~v~v~eG---e~v~L~C~-a~G~P~p~v~W~k~~~~~~~~~~---~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-- 367 (902)
.+..+.+.+| +.++|.|. +.+.|.+.+.|+|+......... ........+.|.|.+++.+|+|.|+|.|.|
T Consensus 138 ~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 217 (331)
T 3u83_A 138 TQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHM 217 (331)
T ss_dssp CSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETT
T ss_pred CCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCC
Confidence 4556788899 88999998 88899999999996333211100 001111123577778899999999999998
Q ss_pred ------------CCCEEEE-cCceeeeecCceEEEEEEeeccCCce-EEEEecCCeeeecCCceEEEeecCCCceeeEeE
Q psy12803 368 ------------VPPQILI-RNRRVGVPIGRTATLECEVEAFPLSV-RYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQ 433 (902)
Q Consensus 368 ------------~~P~i~~-~p~~~~v~~G~~v~L~C~a~g~P~P~-v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~st 433 (902)
.+|.+.. .+....+.+|++++|.|.+.+.|.|. +.|++++..+.. ... . . ..+
T Consensus 218 ~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~--~~~--~---~------~~~ 284 (331)
T 3u83_A 218 DRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPK--GVE--A---Q------NRT 284 (331)
T ss_dssp EEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCT--TEE--E---E------TTE
T ss_pred CcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccc--cce--e---c------CcE
Confidence 3555554 33345578899999999999999998 999998876632 111 1 1 124
Q ss_pred EEEe-ccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 434 LNIS-NVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 434 L~I~-~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
|.|. +++.+|+|.|+|.|.|..|..+.++.|.|.....
T Consensus 285 L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 323 (331)
T 3u83_A 285 LFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAA 323 (331)
T ss_dssp EEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC---
T ss_pred EEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccch
Confidence 9999 9999999999999999999999999999987544
No 134
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.68 E-value=4.3e-17 Score=178.13 Aligned_cols=171 Identities=19% Similarity=0.240 Sum_probs=122.2
Q ss_pred ecCCcEEEEcCCeEEEEEecCCC----CCCceEEecCCCccc---------------ccCCccce----eccCCcEEEEe
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGH----PKPSIIWKTSENKPI---------------TLGSWKDS----AVASSTLNFTR 352 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~----P~p~v~W~k~~~~~~---------------~~~~~~~~----~~~~~sL~I~~ 352 (902)
..+.++.+.+|++++|.|.+.+. +.+.+.|+|++.... .....+.. ...+.+|.|.+
T Consensus 19 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 98 (331)
T 3u83_A 19 QVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSR 98 (331)
T ss_dssp --CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECS
T ss_pred EcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcc
Confidence 34556889999999999999886 556799999542110 01111222 12356899999
Q ss_pred eeeecCceeEEeec-C--------------CCCEEEE--cCceeeeecC---ceEEEEEE-eeccCCceEEEEecCCeee
Q psy12803 353 INRINMGAYMCLAD-N--------------VPPQILI--RNRRVGVPIG---RTATLECE-VEAFPLSVRYWEFIDGTLI 411 (902)
Q Consensus 353 Vt~~DsG~YtC~A~-N--------------~~P~i~~--~p~~~~v~~G---~~v~L~C~-a~g~P~P~v~W~k~~~~l~ 411 (902)
++.+|+|.|+|.+. | .+|.+.. .+..+.+.+| +.+.|.|. +.+.|.|.+.|+++.....
T Consensus 99 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~ 178 (331)
T 3u83_A 99 LELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEA 178 (331)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEE
T ss_pred cCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCcc
Confidence 99999999999854 3 3454432 4455677888 78999997 8899999999998633221
Q ss_pred ecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 412 EHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 412 ~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
. ........+.+...+.|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.
T Consensus 179 ~-----~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~ 233 (331)
T 3u83_A 179 E-----YQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPE 233 (331)
T ss_dssp E-----EEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEE
T ss_pred c-----cceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCe
Confidence 1 111223344455667899999999999999999999999999999888875543
No 135
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.68 E-value=2.2e-16 Score=161.21 Aligned_cols=144 Identities=15% Similarity=0.168 Sum_probs=101.8
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcc--ceeccCCcEEEEeeeeecCceeEEeecC-----------
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWK--DSAVASSTLNFTRINRINMGAYMCLADN----------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~--~~~~~~~sL~I~~Vt~~DsG~YtC~A~N----------- 367 (902)
..+.+|++|+|.|.+.+ +.+.+.|+|++..+....... .....++.|.|.+++.+|+|.|+|.|.|
T Consensus 17 ~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s 95 (201)
T 1nkr_A 17 PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPS 95 (201)
T ss_dssp SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCC
T ss_pred CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCCC
Confidence 66889999999999985 778999999876543211100 0112346899999999999999999953
Q ss_pred -----------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEE
Q psy12803 368 -----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 368 -----------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I 436 (902)
.+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|++++..+..... .... ... ....+|.|
T Consensus 96 ~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~-~~~----~~~~~L~i 167 (201)
T 1nkr_A 96 DPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLP-AGPK-VNG----TFQADFPL 167 (201)
T ss_dssp CCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEE-CEEE-ETT----EEEEEEEE
T ss_pred CCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccc-cccc-cCC----ceEEEEEe
Confidence 1244444343 36789999999999986 5688999998866532111 1111 110 12456999
Q ss_pred eccCCCCCeEEEEEEEeCC
Q psy12803 437 SNVNISDFDTYRCISKNEV 455 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~ 455 (902)
.+|+ |+|.|+|.|.+..
T Consensus 168 ~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 168 GPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EECC--SCEEEEEEEEETT
T ss_pred CCcC--CCeeEEEEEEcCC
Confidence 9998 9999999999764
No 136
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.67 E-value=1.3e-16 Score=166.56 Aligned_cols=170 Identities=15% Similarity=0.208 Sum_probs=111.8
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--cc--cc--c-----------CCccceec-----cCCcEEEE
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KP--IT--L-----------GSWKDSAV-----ASSTLNFT 351 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~--~~--~-----------~~~~~~~~-----~~~sL~I~ 351 (902)
..+..+.+.+|++|+|.|.+.+.+ .+.|.|+|.+. .+ +. . ...+.... .+.+|+|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (227)
T 1mju_H 5 QQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLS 84 (227)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred cCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEEC
Confidence 345668899999999999999876 68899998642 11 10 0 01122221 23489999
Q ss_pred eeeeecCceeEEeecCC-------------------CCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCee
Q psy12803 352 RINRINMGAYMCLADNV-------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGTL 410 (902)
Q Consensus 352 ~Vt~~DsG~YtC~A~N~-------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~l 410 (902)
+++.+|+|.|.|.+.|. +|.+........+.+|+.++|.|.+.+. |.+ .|.|++++..+
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 85 SLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 164 (227)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred CCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcC
Confidence 99999999999999761 1333322222235679999999999986 777 99998887543
Q ss_pred eecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCC
Q psy12803 411 IEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 411 ~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
......... .. +.+...++|.|..+..+| |.|+|.|.|..+.....+.+.+..+|
T Consensus 165 ~~~~~~~~~---~~-g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p 219 (227)
T 1mju_H 165 GVHTFPAVL---QS-DLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPT 219 (227)
T ss_dssp TEEECCCEE---ET-TEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC-
T ss_pred CcEECCcee---cC-CeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCC
Confidence 111111111 11 445567789999999888 99999999988777666666555443
No 137
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.67 E-value=4.1e-16 Score=158.30 Aligned_cols=160 Identities=13% Similarity=0.237 Sum_probs=107.4
Q ss_pred cEEEEcCCeEEEEEecCC----CCCCceEEecCCCcccccC----------Cccce--eccCCcEEEEeeeeecCceeEE
Q psy12803 300 PIVVREGDNVRLRCVATG----HPKPSIIWKTSENKPITLG----------SWKDS--AVASSTLNFTRINRINMGAYMC 363 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G----~P~p~v~W~k~~~~~~~~~----------~~~~~--~~~~~sL~I~~Vt~~DsG~YtC 363 (902)
.+.+.+|++|+|.|.+.+ .|.+.+.|+|++..+.... ..+.. ...+.+|.|.+++.+|+|.|+|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 477999999999999964 4678899999765542110 01111 2345689999999999999999
Q ss_pred eecCC---CC------EE--EEcC----ceee---eecCceEEEEEEee-ccCCceEEEEecCCeeeecCCceEEEeecC
Q psy12803 364 LADNV---PP------QI--LIRN----RRVG---VPIGRTATLECEVE-AFPLSVRYWEFIDGTLIEHDGVKYSISDVD 424 (902)
Q Consensus 364 ~A~N~---~P------~i--~~~p----~~~~---v~~G~~v~L~C~a~-g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~ 424 (902)
.|.|. .. .+ .+.. ..+. ...|+.++|.|.+. +.|.|.|.|++++..+.. ....+.. ...
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~-~~~~~~~-~~~ 160 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNA-INTTVSQ-DPE 160 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECC-SEEEEEE-CTT
T ss_pred EEEcCCCCccccccccEEEEEEcCCCCCCceEeccCCCCCeEEEEEecCCccCCCEEEEEECCEECcc-ccceEEe-cCC
Confidence 99981 11 11 1111 1111 24578999999995 999999999998776643 2222221 122
Q ss_pred CCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 425 KGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 425 ~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
.+.+...++| .+..+|+|.|+|.|.|..|..++.+.+
T Consensus 161 ~~~~~~~~~~---~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 161 TELYAVSSKL---DFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp TCCEEEEEEE---EEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred CcEEEEEEEE---EEEecCCCEEEEEEecCcceeeeEEec
Confidence 2333333333 445689999999999999998887765
No 138
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.67 E-value=1.9e-16 Score=166.49 Aligned_cols=140 Identities=19% Similarity=0.196 Sum_probs=108.6
Q ss_pred ecCCcEEEEcCCeEEEEEec-CCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-------
Q psy12803 296 FSSSPIVVREGDNVRLRCVA-TGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------- 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a-~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------- 367 (902)
..+....+.+|+++.|.|.+ .+.|.+.+.|+|++..+.. ...+..|.|.+++.+|+|.|+|.|.|
T Consensus 87 ~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~-------~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~ 159 (262)
T 3rjd_A 87 LQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF-------FHWNSNLTILKTNISHNGTYHCSGMGKHRYTSA 159 (262)
T ss_dssp EEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEE-------EEECCCEEESSCCGGGCEEEEEEEESSSEEEEE
T ss_pred ecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccc-------cCCCCeEEEEECChhhCEEEEEEEeCCCCcccc
Confidence 34455678899999999999 6788899999997655421 22356899999999999999999988
Q ss_pred ----------CCCEEEEcCceeeeecCceEEEEEEeeccCC-ce----EEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 368 ----------VPPQILIRNRRVGVPIGRTATLECEVEAFPL-SV----RYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 368 ----------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~-P~----v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
.+|.+...+ ...+.+|+.+.|.|.+.+.|. |. +.|++++..+... .. .+
T Consensus 160 ~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~---------~~------~~ 223 (262)
T 3rjd_A 160 GISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR---------NT------SS 223 (262)
T ss_dssp CEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE---------ES------CC
T ss_pred ceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc---------CC------Cc
Confidence 244554444 556889999999999999986 54 6787776655321 11 23
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCcee
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVDIA 458 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G~~ 458 (902)
+|.|.+++.+|+|.|+|.|.|..|..
T Consensus 224 ~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 224 EYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred eEEEEEechhhCeEEEEEEEcccCce
Confidence 49999999999999999999999975
No 139
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.67 E-value=3.7e-17 Score=201.66 Aligned_cols=204 Identities=19% Similarity=0.239 Sum_probs=141.1
Q ss_pred eeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeee-eecCceeEEeecC-----
Q psy12803 294 HIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRIN-RINMGAYMCLADN----- 367 (902)
Q Consensus 294 ~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt-~~DsG~YtC~A~N----- 367 (902)
.+.......+.+|++++|.|.+.+.|.+.+.|+|++..+.. ..+.....+++|.|.+++ .+|+|.|+|.|.|
T Consensus 529 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~--~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~ 606 (816)
T 3dmk_A 529 YIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPI--NRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYS 606 (816)
T ss_dssp EECCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCC--STTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCE
T ss_pred eeEccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEccc--CCceEEecCCeEEEEecCccccCEEEEEEEEECCCce
Confidence 34445567889999999999999999999999997765432 223344567899999998 5899999999998
Q ss_pred ----------CCCEEEE-cCceeeeecCceEEEEEEeeccCCc-eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEE
Q psy12803 368 ----------VPPQILI-RNRRVGVPIGRTATLECEVEAFPLS-VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLN 435 (902)
Q Consensus 368 ----------~~P~i~~-~p~~~~v~~G~~v~L~C~a~g~P~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~ 435 (902)
.+|.+.. ......+.+|+.++|.|.+.+.|.+ .+.|++++..+........... .. ..++|.
T Consensus 607 ~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~--~~----~~~~L~ 680 (816)
T 3dmk_A 607 ARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRV--GR----RGSVLT 680 (816)
T ss_dssp EEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEE--TT----TEEEEE
T ss_pred eeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEc--CC----CeeEEE
Confidence 1222211 1234567899999999999877655 8999998877644333222211 11 235699
Q ss_pred EeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCCCCCCCCcceEEEEeCCCCCCccccCCCCcccCCCC
Q psy12803 436 ISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTPVPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPC 507 (902)
Q Consensus 436 I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~C~~~~v~~~c 507 (902)
|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|...... .......+....+.|.....+.+.+-|..
T Consensus 681 i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~P~p~i~W~k 750 (816)
T 3dmk_A 681 IEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEP--TDKAFAQGSDAKVECKADGFPKPQVTWKK 750 (816)
T ss_dssp EESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECC--CCEEEETTCCEEEECEEEEESCCEEECCE
T ss_pred EccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeec--ccceecCCCcEEEEEEEecCCCCeEEEEe
Confidence 99999999999999999999999999999988765432111 11222223334455444444444555553
No 140
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.67 E-value=2.6e-16 Score=166.70 Aligned_cols=157 Identities=12% Similarity=0.127 Sum_probs=110.4
Q ss_pred EEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC--------------
Q psy12803 302 VVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN-------------- 367 (902)
Q Consensus 302 ~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-------------- 367 (902)
.|.+|++|+|.|.+.+ +...+.|+|++..+............+..|.|.+|+.+|+|.|+|.+.|
T Consensus 17 ~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~ 95 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLV 95 (242)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEE
T ss_pred ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEE
Confidence 7899999999999986 4568999998765432111111223346899999999999999999965
Q ss_pred -----CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCC
Q psy12803 368 -----VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNIS 442 (902)
Q Consensus 368 -----~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~ 442 (902)
.+|.+...+ ...+.+|++|+|.|.+.+.+ +.+.|++++..+.. ... . .. ...+|.|.+|+.+
T Consensus 96 V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~----~~~-~-~~-----~~~~l~I~~v~~~ 162 (242)
T 1p6f_A 96 VTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTAT-SMFLLLKEGRSSHV----QRG-Y-GK-----VQAEFPLGPVTTA 162 (242)
T ss_dssp EECCSCCCEEEEES-CSEEETTCEEEEEEECTTSC-SEEEEEECSSSCEE----EEE-E-CS-----SEEEEEEEECCGG
T ss_pred eecccCCCceEccC-CCccCCCCcEEEEEecCCCC-CEEEEEECCCccCc----ccc-C-CC-----ceEEEEeCCCccc
Confidence 134444444 24578999999999998654 69999998866543 111 1 11 1346999999999
Q ss_pred CCeEEEEEEEeCC---ceeEEEEEEEeecCCCC
Q psy12803 443 DFDTYRCISKNEV---DIAKGSLILFESNAKTP 472 (902)
Q Consensus 443 DsG~YtC~A~N~~---G~~~~s~~L~V~~~p~~ 472 (902)
|+|.|+|.|.|.. ...+..+.|.|...+..
T Consensus 163 d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~ 195 (242)
T 1p6f_A 163 HRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIEN 195 (242)
T ss_dssp GCEEEEEEEEEETTEECCCCCCEEEEEEC----
T ss_pred cCEEEEEEEECCCCcccCCCCCEEEEEeccCCC
Confidence 9999999999874 23356677877765443
No 141
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.67 E-value=3e-16 Score=165.94 Aligned_cols=172 Identities=20% Similarity=0.260 Sum_probs=114.8
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCC--CCceEEecCC-C-ccccc---------------CCccceecc-----CCcEEE
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSE-N-KPITL---------------GSWKDSAVA-----SSTLNF 350 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~-~-~~~~~---------------~~~~~~~~~-----~~sL~I 350 (902)
+..+.++.+.+|++|+|.|.+.+.+ .+.+.|+|.. . .+... ...+..... ..+|+|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 84 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHL 84 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEe
Confidence 3456678899999999999999854 7899999832 1 11100 011222221 124999
Q ss_pred EeeeeecCceeEEeecC--------------C----------------CCEEEEcCceeeeecCceEEEEEEeeccCCc-
Q psy12803 351 TRINRINMGAYMCLADN--------------V----------------PPQILIRNRRVGVPIGRTATLECEVEAFPLS- 399 (902)
Q Consensus 351 ~~Vt~~DsG~YtC~A~N--------------~----------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P- 399 (902)
.+++.+|+|.|+|.|.| . ++.+...+..+.+.+|++++|.|.+.+.|.+
T Consensus 85 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 164 (253)
T 3uzq_A 85 SSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRY 164 (253)
T ss_dssp CSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEET
T ss_pred CCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccC
Confidence 99999999999999987 1 2445555666789999999999999999887
Q ss_pred ---eEEEEecC--Cee--eecC--------CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee-EEEEE
Q psy12803 400 ---VRYWEFID--GTL--IEHD--------GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA-KGSLI 463 (902)
Q Consensus 400 ---~v~W~k~~--~~l--~~~~--------~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~-~~s~~ 463 (902)
.+.|+++. ..+ +... ..++...... ...+|.|.+++.+|+|.|+|.|.|..+.. ....+
T Consensus 165 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~ 239 (253)
T 3uzq_A 165 GNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSR-----TDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTK 239 (253)
T ss_dssp TEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEE
T ss_pred CCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCC-----CEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEE
Confidence 99999853 211 1100 1122221111 13469999999999999999999975443 23445
Q ss_pred EEeecCCC
Q psy12803 464 LFESNAKT 471 (902)
Q Consensus 464 L~V~~~p~ 471 (902)
|.|...++
T Consensus 240 l~v~~~~~ 247 (253)
T 3uzq_A 240 LEIKRPLE 247 (253)
T ss_dssp EEECCC--
T ss_pred EEEcCCCC
Confidence 66655443
No 142
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.67 E-value=9.2e-17 Score=176.01 Aligned_cols=162 Identities=17% Similarity=0.244 Sum_probs=107.7
Q ss_pred cEEEEcCCeEEEEEecCCCCCC--ceEEecCCCcccccCCccc------eeccCCcEEEEeeeeecCceeEEeecC----
Q psy12803 300 PIVVREGDNVRLRCVATGHPKP--SIIWKTSENKPITLGSWKD------SAVASSTLNFTRINRINMGAYMCLADN---- 367 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G~P~p--~v~W~k~~~~~~~~~~~~~------~~~~~~sL~I~~Vt~~DsG~YtC~A~N---- 367 (902)
...+.+|++++|.|.+.+.|.+ .++|+|++..+........ .....+.|.|.....+|+|.|+|.|.|
T Consensus 126 ~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 126 AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 3567899999999999997765 8999998765432221000 111123577777777788999999998
Q ss_pred ---------------CCCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCeeeecCCceEEEeecCCCceee
Q psy12803 368 ---------------VPPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGTLIEHDGVKYSISDVDKGSYQY 430 (902)
Q Consensus 368 ---------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~ 430 (902)
.+|.+...+.. +.+|+.++|.|.+.+. |++ .|.|++++..+....... +....++.+..
T Consensus 206 ~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~--~~~~~~g~~~~ 281 (327)
T 2wng_A 206 GDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAST--VTENKDGTYNW 281 (327)
T ss_dssp SCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCS--CEECTTSCEEE
T ss_pred CCcccceEEeccccCCCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCc--eEECCCCcEEE
Confidence 23444433322 6689999999999995 444 899999887765432222 22344556677
Q ss_pred EeEEEEeccCCCCCeEEEEEEEeCCcee-EEEEEEE
Q psy12803 431 IMQLNISNVNISDFDTYRCISKNEVDIA-KGSLILF 465 (902)
Q Consensus 431 ~stL~I~~V~~~DsG~YtC~A~N~~G~~-~~s~~L~ 465 (902)
.+.|.|..+..+|+|.|+|.|.|..+.. +.++.+.
T Consensus 282 ~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~~~~ 317 (327)
T 2wng_A 282 MSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLK 317 (327)
T ss_dssp EEEEEC-------CCEEEEEEEETTCCCEEEEEECC
T ss_pred EEEEEEccccccCCCEEEEEEEeCCCCCchhheEEE
Confidence 7889999999999999999999999875 4444443
No 143
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.67 E-value=3.9e-17 Score=169.82 Aligned_cols=160 Identities=14% Similarity=0.286 Sum_probs=95.3
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCc-cc---c--------cCCccceec---cCCcEEEEeeeeecCcee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENK-PI---T--------LGSWKDSAV---ASSTLNFTRINRINMGAY 361 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~-~~---~--------~~~~~~~~~---~~~sL~I~~Vt~~DsG~Y 361 (902)
.+..+.+.+|++|+|.|.+.+.|.+.|.|+|++.. .. . ....+.... .+.+|.|.+++.+|+|.|
T Consensus 29 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 108 (233)
T 3bqu_C 29 SPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADY 108 (233)
T ss_dssp ECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEE
T ss_pred cCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEE
Confidence 36678899999999999999988889999986421 10 0 001111111 123799999999999999
Q ss_pred EEeecC------------------CCCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCeeeecCCceEEEe
Q psy12803 362 MCLADN------------------VPPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGTLIEHDGVKYSIS 421 (902)
Q Consensus 362 tC~A~N------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~l~~~~~~~~~~~ 421 (902)
+|.|.| .+|.+...+....+.+|++++|.|.+.+. |.+ .|.|++++..+...........
T Consensus 109 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 188 (233)
T 3bqu_C 109 YCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 188 (233)
T ss_dssp EEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCC
T ss_pred EEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCc
Confidence 999987 13444443332233469999999999985 443 7999998766532101111122
Q ss_pred ecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCc
Q psy12803 422 DVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 422 ~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G 456 (902)
...++.+...++|.|..+..+|+|.|+|.|.|...
T Consensus 189 ~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 189 DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred cCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 23445566778899999999999999999999754
No 144
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.67 E-value=1.2e-16 Score=164.93 Aligned_cols=165 Identities=16% Similarity=0.164 Sum_probs=116.0
Q ss_pred CCcEEEEcCCeEEEEEecCC-CCCCc----eEEecCCCcccccC-----------Cccceec--------cCCcEEEEee
Q psy12803 298 SSPIVVREGDNVRLRCVATG-HPKPS----IIWKTSENKPITLG-----------SWKDSAV--------ASSTLNFTRI 353 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G-~P~p~----v~W~k~~~~~~~~~-----------~~~~~~~--------~~~sL~I~~V 353 (902)
+.++.+.+|++|+|.|.+.+ .+.+. |.|+|++....... ..+.... .+.+|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 34566889999999999955 45444 99999864221100 1112111 3568999999
Q ss_pred eeecCceeEEeecC---------------CCCEEEEcCceeeeecCceE-EEEEEee-ccCCceEEEEecCCeeeecCCc
Q psy12803 354 NRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTA-TLECEVE-AFPLSVRYWEFIDGTLIEHDGV 416 (902)
Q Consensus 354 t~~DsG~YtC~A~N---------------~~P~i~~~p~~~~v~~G~~v-~L~C~a~-g~P~P~v~W~k~~~~l~~~~~~ 416 (902)
+.+|+|.|+|.+.| .+|.+...+.... .+|+.+ .|.|.+. +.|.|.|.|+++.......
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~--- 161 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQT--- 161 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCC---
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCcc---
Confidence 99999999999986 4566654333332 678888 5999987 8999999998764433211
Q ss_pred eEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 417 KYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 417 ~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
........+.+...++|.|.++..+|.|.|+|.|.|..+.....+.|...
T Consensus 162 -~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~~ 211 (221)
T 3eow_R 162 -SQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSLT 211 (221)
T ss_dssp -EEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECCC
T ss_pred -ceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEEE
Confidence 11122334455567889999999999999999999999887777666544
No 145
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.67 E-value=1.4e-16 Score=173.35 Aligned_cols=171 Identities=14% Similarity=0.134 Sum_probs=122.2
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCC-----ceEEecCCCcccc-----------cCCccc--------eeccCCcEEE
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKP-----SIIWKTSENKPIT-----------LGSWKD--------SAVASSTLNF 350 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p-----~v~W~k~~~~~~~-----------~~~~~~--------~~~~~~sL~I 350 (902)
+..|.++++.+|++|+|.|.+.+.+.+ .|+|+|++..... ....+. ....+.+|.|
T Consensus 4 v~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I 83 (313)
T 4fqp_A 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM 83 (313)
T ss_dssp EECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEE
T ss_pred EcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEE
Confidence 345667888999999999999886655 3899997654211 000111 1123457999
Q ss_pred EeeeeecCceeEEeecC---------------CCCEEEEcCceeeeecCceEEEEEEee-ccCCceEEEEecCCeeeecC
Q psy12803 351 TRINRINMGAYMCLADN---------------VPPQILIRNRRVGVPIGRTATLECEVE-AFPLSVRYWEFIDGTLIEHD 414 (902)
Q Consensus 351 ~~Vt~~DsG~YtC~A~N---------------~~P~i~~~p~~~~v~~G~~v~L~C~a~-g~P~P~v~W~k~~~~l~~~~ 414 (902)
.+++.+|+|.|+|.+.+ .+|.+........+..++.+.|.|.+. +.|.+.+.|++++..+....
T Consensus 84 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~ 163 (313)
T 4fqp_A 84 FGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTS 163 (313)
T ss_dssp CSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEE
T ss_pred CcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccc
Confidence 99999999999998854 456666555566677888999999875 78999999999887764321
Q ss_pred CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee--EEEEEEEeecC
Q psy12803 415 GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA--KGSLILFESNA 469 (902)
Q Consensus 415 ~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~--~~s~~L~V~~~ 469 (902)
.......+.+...+.|.|..+..+|+|.|+|.|.|..+.. ..++.|.|..+
T Consensus 164 ----~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~ 216 (313)
T 4fqp_A 164 ----QVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYP 216 (313)
T ss_dssp ----EEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEE
T ss_pred ----eeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccC
Confidence 1222334445566789999999999999999999987665 44555555443
No 146
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.67 E-value=4.2e-16 Score=158.56 Aligned_cols=146 Identities=18% Similarity=0.137 Sum_probs=100.3
Q ss_pred CCcEEEEcCCeEEEEEecCC-CCCCceEEecCCCcccc--cC----------C----ccceeccCCcEEEEeeeeecCce
Q psy12803 298 SSPIVVREGDNVRLRCVATG-HPKPSIIWKTSENKPIT--LG----------S----WKDSAVASSTLNFTRINRINMGA 360 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G-~P~p~v~W~k~~~~~~~--~~----------~----~~~~~~~~~sL~I~~Vt~~DsG~ 360 (902)
+..+.+.+|++|+|.|.+.+ .+.+.|.|+|++..+.. .. . .+.....+++|+|.+++.+|+|.
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~ 84 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGS 84 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEE
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCce
Confidence 44578999999999999986 45679999997543211 00 0 12223356799999999999999
Q ss_pred eEEeecCCC-----------------CEEEEcCceeeeecCc-eEEEEEEeecc-CCceEEEEecCCeeeecCCceEEEe
Q psy12803 361 YMCLADNVP-----------------PQILIRNRRVGVPIGR-TATLECEVEAF-PLSVRYWEFIDGTLIEHDGVKYSIS 421 (902)
Q Consensus 361 YtC~A~N~~-----------------P~i~~~p~~~~v~~G~-~v~L~C~a~g~-P~P~v~W~k~~~~l~~~~~~~~~~~ 421 (902)
|+|.|.|.. |.+.... ..+..|. +++|.|.+.+. |.|.+.|++++..+.. .
T Consensus 85 Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~--~------ 154 (193)
T 2if7_A 85 YRAQISTKTSAKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS--Q------ 154 (193)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES--S------
T ss_pred EEEEEEecCCCeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC--C------
Confidence 999998811 1111111 1123455 89999999985 5899999987654321 1
Q ss_pred ecCCCceeeEeEEEEeccCCC-CCeEEEEEEEeCCceeEEEEE
Q psy12803 422 DVDKGSYQYIMQLNISNVNIS-DFDTYRCISKNEVDIAKGSLI 463 (902)
Q Consensus 422 ~~~~~s~~~~stL~I~~V~~~-DsG~YtC~A~N~~G~~~~s~~ 463 (902)
..|.|.....+ |+|.|+|.|.|.+|..+..+.
T Consensus 155 ----------~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~~ 187 (193)
T 2if7_A 155 ----------PNLTVSWDPRISSEQDYTCIAENAVSNLSFSVS 187 (193)
T ss_dssp ----------SEEEEEECTTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred ----------CeEEEEeccCcCCCCcEEEEEECCCCccccccc
Confidence 12666554554 899999999999998866543
No 147
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.67 E-value=5.4e-17 Score=191.41 Aligned_cols=162 Identities=16% Similarity=0.199 Sum_probs=108.3
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-------------
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------------- 367 (902)
....+|+.+.|.|.+.|+|.|.|+|++++....... ......-.+.+..+..+|+|.|+|.|.|
T Consensus 149 ~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~ 225 (527)
T 3qs9_E 149 YFRKMENQDALVCISESVPEPIVEWVLCDSQGESCK---EESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTID 225 (527)
T ss_dssp EEEECSSSSCEEEEEEESSCCEEEEEEC----------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEE
T ss_pred cEEecCCceEEEEEEceecCCeEEEEECCCCCcccc---ccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEE
Confidence 445678889999999999999999999775432110 0000011122334557899999999998
Q ss_pred --CCCEEEEcCceeeeecCceEEEEEEee-ccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCC
Q psy12803 368 --VPPQILIRNRRVGVPIGRTATLECEVE-AFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDF 444 (902)
Q Consensus 368 --~~P~i~~~p~~~~v~~G~~v~L~C~a~-g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~Ds 444 (902)
.+|.+ .+..+.+.+|+.+.|.|.+. +.|.+.|.|++++..+......... ............+|.|.+++.+|+
T Consensus 226 V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~-~~~~~~~~~~~~~L~I~~v~~~Ds 302 (527)
T 3qs9_E 226 LNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMS-TYSTNRTMIRILFAFVSSVARNDT 302 (527)
T ss_dssp SSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEE-EEETTTEEEEEEEEEESSCCGGGC
T ss_pred EeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeee-eeccCcceeeEEEEEEccCCcccC
Confidence 12222 34567889999999999997 8999999999988766432211111 111122223345699999999999
Q ss_pred eEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 445 DTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 445 G~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
|.|+|.|.|. .+.++.|.|..++.
T Consensus 303 G~Y~C~a~N~---~~~~~~L~V~~~p~ 326 (527)
T 3qs9_E 303 GYYTCSSSKH---PSQSALVTIVEKGF 326 (527)
T ss_dssp EEEEEEETTE---EEEEEEEEEC--CE
T ss_pred eEEEEEEEeC---CCceEEEEEEccCc
Confidence 9999999998 67778888876554
No 148
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.67 E-value=3.1e-16 Score=166.07 Aligned_cols=170 Identities=18% Similarity=0.241 Sum_probs=114.8
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--ccccc---------------CCccceecc-----CCcEEEE
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KPITL---------------GSWKDSAVA-----SSTLNFT 351 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~~~~---------------~~~~~~~~~-----~~sL~I~ 351 (902)
..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|... .+... ...+..... ..+|+|.
T Consensus 7 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 86 (256)
T 3umt_A 7 QQSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELR 86 (256)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred EccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEEC
Confidence 344557799999999999999866 78999998431 11000 011112111 2259999
Q ss_pred eeeeecCceeEEeecCC----------------------------------CCEEEEcCceeeeecCceEEEEEEeeccC
Q psy12803 352 RINRINMGAYMCLADNV----------------------------------PPQILIRNRRVGVPIGRTATLECEVEAFP 397 (902)
Q Consensus 352 ~Vt~~DsG~YtC~A~N~----------------------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P 397 (902)
+++.+|+|.|.|.+.|. ++.+...+..+.+.+|++++|.|.+.+.|
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 166 (256)
T 3umt_A 87 SLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDI 166 (256)
T ss_dssp SCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCC
T ss_pred CCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCC
Confidence 99999999999999872 44555556667899999999999999999
Q ss_pred CceEEEEecC--Ceee--ec--------CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee-EEEEEE
Q psy12803 398 LSVRYWEFID--GTLI--EH--------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA-KGSLIL 464 (902)
Q Consensus 398 ~P~v~W~k~~--~~l~--~~--------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~-~~s~~L 464 (902)
.+.+.|++.. ..+. .. ...++...... ...+|.|.+++.+|+|.|+|.|.|..... .....|
T Consensus 167 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L 241 (256)
T 3umt_A 167 GSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSG-----SDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKL 241 (256)
T ss_dssp TTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEET-----TEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEE
T ss_pred CcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCC-----CEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEE
Confidence 8999999853 2211 00 01222222111 13469999999999999999999965443 234566
Q ss_pred EeecCC
Q psy12803 465 FESNAK 470 (902)
Q Consensus 465 ~V~~~p 470 (902)
.|...+
T Consensus 242 ~V~~~~ 247 (256)
T 3umt_A 242 EIKRAA 247 (256)
T ss_dssp EEC---
T ss_pred EEECCC
Confidence 666543
No 149
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.66 E-value=3e-16 Score=162.17 Aligned_cols=164 Identities=15% Similarity=0.232 Sum_probs=111.7
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC-c-c--cc----c-----------CCccceec-----cCCcEEE
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN-K-P--IT----L-----------GSWKDSAV-----ASSTLNF 350 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~-~-~--~~----~-----------~~~~~~~~-----~~~sL~I 350 (902)
.+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.+. . + +. . ...+.... .+.+|+|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (222)
T 1q9r_B 6 ESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQM 85 (222)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEE
T ss_pred cCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEE
Confidence 44567899999999999999865 78899998542 1 1 00 0 01122222 1248999
Q ss_pred EeeeeecCceeEEeecCCC-----------------------CEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEe
Q psy12803 351 TRINRINMGAYMCLADNVP-----------------------PQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEF 405 (902)
Q Consensus 351 ~~Vt~~DsG~YtC~A~N~~-----------------------P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k 405 (902)
.+++.+|+|.|.|.+.|.. |.+........+.+|+.++|.|.+.+. |.| .|.|++
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 165 (222)
T 1q9r_B 86 NTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 165 (222)
T ss_dssp CSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred CcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEec
Confidence 9999999999999998721 111111111224579999999999986 888 999988
Q ss_pred cCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12803 406 IDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILF 465 (902)
Q Consensus 406 ~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~ 465 (902)
++..+... ...... ..+.+...+.|.|.++..+| |.|+|.|.|..|.......|.
T Consensus 166 ~g~~~~~~---~~~~~~-~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i~ 220 (222)
T 1q9r_B 166 GSLSSGVH---TFPAVL-QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 220 (222)
T ss_dssp GTBCTTEE---EEEEEE-ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEECC
T ss_pred CCeEcceE---eccccc-cCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEecc
Confidence 77543211 111111 12355566789999999999 999999999999876655543
No 150
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.66 E-value=1.3e-16 Score=171.39 Aligned_cols=152 Identities=16% Similarity=0.255 Sum_probs=114.1
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC---------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN--------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N--------- 367 (902)
.+.++.+.+|++++|.|.+.+ .+.|+|++..+ ......+++|.|.+++.+|+|.|+|.|.|
T Consensus 18 ~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~------~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ng~~~~~~l~ 87 (290)
T 2o26_X 18 AQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN------EMVENKKNEWIQEKAEATRTGTYTCSNSNGLTSSIYVF 87 (290)
T ss_dssp CSSEEEEETTSCEEEEEECTT----EEEEEEECSSS------CEEEECSSEEEETTCCGGGCEEEEEEESSSCEEEEEEE
T ss_pred CCCeEEEcCCCcEEEEECCCC----cEEEecCCcce------eeecCCCceEEEeccCHHhCeEEEEEeeCCccEEEEEE
Confidence 456688999999999999998 89999988765 11222347999999999999999999987
Q ss_pred --CCCEEEEcCceeeeecCceEEEEEEeeccCC-ceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCC
Q psy12803 368 --VPPQILIRNRRVGVPIGRTATLECEVEAFPL-SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDF 444 (902)
Q Consensus 368 --~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~-P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~Ds 444 (902)
.+|.+...+..+.+.+|+.+.|.|.+.+ |. +.+.|++.++..+. ...++..... . .|.|.+++.+|+
T Consensus 88 V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~-~~~~~~~~~~--~------~L~i~~v~~~d~ 157 (290)
T 2o26_X 88 VRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLP-TDLTFVPNPK--A------GITIKNVKRAYH 157 (290)
T ss_dssp EECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCC-TTCEEEEETT--T------EEEEESCCGGGT
T ss_pred EeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCC-CCCceeeCCC--C------CEEEecccHHHC
Confidence 3333334455677889999999999995 87 99999654444332 2333333221 2 399999999999
Q ss_pred e-EEEEEEEeCCceeE-EEEEEEeec
Q psy12803 445 D-TYRCISKNEVDIAK-GSLILFESN 468 (902)
Q Consensus 445 G-~YtC~A~N~~G~~~-~s~~L~V~~ 468 (902)
| .|+|.|.|..+... ..+.|.|..
T Consensus 158 G~~Y~C~a~n~~~~~~s~~~~l~V~~ 183 (290)
T 2o26_X 158 RLCVRCAAQRDGTWLHSDKFTLKVRE 183 (290)
T ss_dssp TCEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCEEEEEEEECCceEEeEEEEEEEEe
Confidence 9 99999999966643 357777763
No 151
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.66 E-value=6.4e-16 Score=164.42 Aligned_cols=169 Identities=18% Similarity=0.246 Sum_probs=113.7
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--cc--ccc-------------CCccceec-----cCCcEEEE
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KP--ITL-------------GSWKDSAV-----ASSTLNFT 351 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~--~~~-------------~~~~~~~~-----~~~sL~I~ 351 (902)
..+..+.+.+|++|+|.|.+.+.| .+.|.|+|.+. .+ +.. ...+.... ...+|+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (256)
T 1nqb_A 5 QQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLS 84 (256)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEEC
Confidence 455668899999999999999875 67999999532 11 000 01122222 12479999
Q ss_pred eeeeecCceeEEeecCC-------------------CCEEEEcCceeeeecCceEEEEEEeeccCCc-----eEEEEe--
Q psy12803 352 RINRINMGAYMCLADNV-------------------PPQILIRNRRVGVPIGRTATLECEVEAFPLS-----VRYWEF-- 405 (902)
Q Consensus 352 ~Vt~~DsG~YtC~A~N~-------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P-----~v~W~k-- 405 (902)
+++.+|+|.|+|.|.|. ++.+...+..+.+.+|++++|.|.+.+.|.+ .|.|++
T Consensus 85 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 164 (256)
T 1nqb_A 85 SLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQK 164 (256)
T ss_dssp SCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred cCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEEC
Confidence 99999999999999883 1223334556678999999999999999875 999998
Q ss_pred cCCeee--ec--------CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee-EEEEEEEeecC
Q psy12803 406 IDGTLI--EH--------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA-KGSLILFESNA 469 (902)
Q Consensus 406 ~~~~l~--~~--------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~-~~s~~L~V~~~ 469 (902)
++..+. .. ...++...... ...+|.|.+++.+|+|.|+|.|.|..... .....|.|..+
T Consensus 165 ~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 234 (256)
T 1nqb_A 165 PGQSPKLLIYKVSNRFSGVPDRFSGSGSG-----TDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRA 234 (256)
T ss_dssp TTSCEEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC-
T ss_pred CCCCcEEEEEEeCCCCCccCCcEEEEccC-----CEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECC
Confidence 444331 10 01222221111 13469999999999999999999854332 23445666543
No 152
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.66 E-value=2e-16 Score=163.36 Aligned_cols=163 Identities=17% Similarity=0.250 Sum_probs=111.0
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC-c-c--c-ccC--------------Cccceec-----cCCcEEE
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN-K-P--I-TLG--------------SWKDSAV-----ASSTLNF 350 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~-~-~--~-~~~--------------~~~~~~~-----~~~sL~I 350 (902)
.+..+.+.+|++|+|.|.+.+.+ .+.|.|+|.+. . + + ... ..+.... .+.+|.|
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (220)
T 1pz5_B 6 ESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQM 85 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEE
Confidence 45668899999999999999866 78899998642 1 1 1 000 1122221 1238999
Q ss_pred EeeeeecCceeEEeecCC---------------------CCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecC
Q psy12803 351 TRINRINMGAYMCLADNV---------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFID 407 (902)
Q Consensus 351 ~~Vt~~DsG~YtC~A~N~---------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~ 407 (902)
.+++.+|+|.|.|.+.|. +|.+...+....+.+|+.++|.|.+.+. |.| .|.|++++
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 165 (220)
T 1pz5_B 86 NNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGA 165 (220)
T ss_dssp CSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred ccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCC
Confidence 999999999999999872 1222221112234679999999999988 988 99998877
Q ss_pred CeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 408 GTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 408 ~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
............ .. +.+...++|.|.++..+| |.|+|.|.|..|..+.++.+
T Consensus 166 ~~~~~~~~~~~~---~~-~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~ 217 (220)
T 1pz5_B 166 LSSGVRTVSSVL---QS-GFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKEI 217 (220)
T ss_dssp CCTTEEECCCEE---ET-TEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred cccceEEcCCcc---cC-CeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeecC
Confidence 631000000011 11 345556789999998866 99999999999987766544
No 153
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.66 E-value=1.4e-16 Score=181.29 Aligned_cols=168 Identities=14% Similarity=0.230 Sum_probs=116.2
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCC----CceEEecCC--Cccc--c--------cCCccceec---cCCcEEEEeeeeec
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPK----PSIIWKTSE--NKPI--T--------LGSWKDSAV---ASSTLNFTRINRIN 357 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~----p~v~W~k~~--~~~~--~--------~~~~~~~~~---~~~sL~I~~Vt~~D 357 (902)
.+..+.+.+|++|+|.|.+.+.|. +.|.|+|++ ..+. . ....+.... ...+|.|.+++.+|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (438)
T 1qgc_4 7 SPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADD 86 (438)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcC
Confidence 466788999999999999999876 489999964 2111 0 001111111 12479999999999
Q ss_pred CceeEEeecCC------------------CCEEEEcCceeeeecCceEEEEEEeec-cCCc-eEEEEecCCeeeecCCce
Q psy12803 358 MGAYMCLADNV------------------PPQILIRNRRVGVPIGRTATLECEVEA-FPLS-VRYWEFIDGTLIEHDGVK 417 (902)
Q Consensus 358 sG~YtC~A~N~------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P-~v~W~k~~~~l~~~~~~~ 417 (902)
+|.|+|.|.|. +|.+...+....+.+|+.+.|.|.+.+ .|.+ .|.|++++..+.......
T Consensus 87 ~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 166 (438)
T 1qgc_4 87 VATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNS 166 (438)
T ss_dssp CEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEE
T ss_pred CeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceec
Confidence 99999999981 333333222222346889999999987 6777 899999776653221112
Q ss_pred EEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 418 YSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 418 ~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
.......++.+...++|.|.+++.+|+|.|+|.|.|..+.......+
T Consensus 167 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 213 (438)
T 1qgc_4 167 WTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSF 213 (438)
T ss_dssp EECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEE
T ss_pred cccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceeccc
Confidence 22233344555667789999999999999999999998876444444
No 154
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.66 E-value=6.2e-16 Score=162.71 Aligned_cols=154 Identities=16% Similarity=0.231 Sum_probs=104.6
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcc----ccc--------CCccceec---cCCcEEEEeeeeecCcee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKP----ITL--------GSWKDSAV---ASSTLNFTRINRINMGAY 361 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~----~~~--------~~~~~~~~---~~~sL~I~~Vt~~DsG~Y 361 (902)
.+..+.+.+|++|+|.|.+.+.|.+.+.|+|..... +.. ...+.... ...+|+|.+++.+|+|.|
T Consensus 10 ~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 89 (250)
T 3esu_F 10 STSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTY 89 (250)
T ss_dssp SCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred cCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEE
Confidence 455678999999999999999999999999954210 000 01111111 122799999999999999
Q ss_pred EEeecC---------------CC-------------------CEEEEcCceeeeecCceEEEEEEeeccC--CceEEEEe
Q psy12803 362 MCLADN---------------VP-------------------PQILIRNRRVGVPIGRTATLECEVEAFP--LSVRYWEF 405 (902)
Q Consensus 362 tC~A~N---------------~~-------------------P~i~~~p~~~~v~~G~~v~L~C~a~g~P--~P~v~W~k 405 (902)
+|.|.| .+ +.+...+..+.+.+|++++|.|.+.+.| .+.+.|++
T Consensus 90 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k 169 (250)
T 3esu_F 90 FCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVK 169 (250)
T ss_dssp EEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEE
T ss_pred EEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEE
Confidence 999987 11 1122234456788999999999999877 78999998
Q ss_pred c--CCeeeec---------------CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEe
Q psy12803 406 I--DGTLIEH---------------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKN 453 (902)
Q Consensus 406 ~--~~~l~~~---------------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N 453 (902)
+ +..+... ...++.+..... ....+|.|.+++.+|+|.|+|.|.|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 170 QRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKS---SSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp ECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGG---GTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred ECCCCCcEEEEEEeccCCccccCccccceEEEEecCC---CCeEEEEECCCCcccCEEEEEEEec
Confidence 7 3322110 012222221111 1134699999999999999999997
No 155
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.66 E-value=7.5e-16 Score=182.35 Aligned_cols=174 Identities=17% Similarity=0.234 Sum_probs=126.9
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCC---ceEEecCCCcc-----ccc-------CCccceec---cC--CcEEEEeee
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKP---SIIWKTSENKP-----ITL-------GSWKDSAV---AS--STLNFTRIN 354 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p---~v~W~k~~~~~-----~~~-------~~~~~~~~---~~--~sL~I~~Vt 354 (902)
+..+.++.+.+|++++|.|.+.+.|.+ .|.|+|++... +.. ...+.... .+ .+|.|.+++
T Consensus 4 i~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~ 83 (585)
T 2ocw_A 4 IFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLS 83 (585)
T ss_pred ccCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCC
Confidence 345667889999999999999997654 89999987532 110 01122221 12 369999999
Q ss_pred eecCceeEEeecC--------------CCCEEEEcCceeeeecCceEEEEEEeeccC-CceEEEEecCCeeee---cC--
Q psy12803 355 RINMGAYMCLADN--------------VPPQILIRNRRVGVPIGRTATLECEVEAFP-LSVRYWEFIDGTLIE---HD-- 414 (902)
Q Consensus 355 ~~DsG~YtC~A~N--------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P-~P~v~W~k~~~~l~~---~~-- 414 (902)
.+|+|.|+|.|.| .+|.+...+..+.+.+|++++|.|.+.+.+ .+.+.|++++..... ..
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~ 163 (585)
T 2ocw_A 84 QDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSG 163 (585)
T ss_pred cccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCc
Confidence 9999999999987 566666677788899999999999999654 578999998764211 10
Q ss_pred ------CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCC
Q psy12803 415 ------GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 415 ------~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
..++.+..... .....+|.|.+++.+|+|.|+|.|.|..|.....+.|.|..++
T Consensus 164 ~~~~~~~~r~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 223 (585)
T 2ocw_A 164 YVNPNYTGRIRLDIQGT--GQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE 223 (585)
T ss_pred ccCccccCcEEEEeccC--CCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC
Confidence 12222221111 1123469999999999999999999999999999999998654
No 156
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.65 E-value=3.4e-16 Score=160.10 Aligned_cols=155 Identities=15% Similarity=0.193 Sum_probs=106.0
Q ss_pred ecCCcEEEEcCCeEEEEEecCCC-------CCCceEEecCCCcc-----ccc----------CCccceec-----cCCcE
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGH-------PKPSIIWKTSENKP-----ITL----------GSWKDSAV-----ASSTL 348 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~-------P~p~v~W~k~~~~~-----~~~----------~~~~~~~~-----~~~sL 348 (902)
..+..+.+.+|++|+|.|.+.+. +.+.+.|+|++... +.. ...+.... .+.+|
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 84 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSL 84 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCE
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEE
Confidence 34567889999999999998864 57889999976531 110 01122221 23479
Q ss_pred EEEeeeeecCceeEEeecCC---------------------CCEEEEcCceeeeecCceEEEEEEeecc----CCceEEE
Q psy12803 349 NFTRINRINMGAYMCLADNV---------------------PPQILIRNRRVGVPIGRTATLECEVEAF----PLSVRYW 403 (902)
Q Consensus 349 ~I~~Vt~~DsG~YtC~A~N~---------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~----P~P~v~W 403 (902)
.|.+++.+|+|.|+|.+.+. +|.+.. ...+.+|+.++|.|.+.+. |.|.+.|
T Consensus 85 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~---~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W 161 (214)
T 2zg1_A 85 SIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF---LEPLESGRPTRLSCSLPGSCEAGPPLTFSW 161 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC-----CCCCTTCCEEEEEECTTCCSCSSCCEEEE
T ss_pred EEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec---CccccCCCeEEEEEEeccCCCCCCCceEEE
Confidence 99999999999999999862 122211 1135689999999999874 8899999
Q ss_pred EecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee--EEEEEEEe
Q psy12803 404 EFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA--KGSLILFE 466 (902)
Q Consensus 404 ~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~--~~s~~L~V 466 (902)
++++..+... . ....+.|.|..+..+|.|.|+|.|.|..+.. ++++.|.|
T Consensus 162 ~~~~~~~~~~---~----------~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~V 213 (214)
T 2zg1_A 162 TGNALSPLDP---E----------TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNV 213 (214)
T ss_dssp ESSTTSSSCS---S----------CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEECCC
T ss_pred eCCCCccCCC---C----------ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEEe
Confidence 9887543211 0 0123459999999999999999999987543 55555543
No 157
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.65 E-value=4.1e-16 Score=166.70 Aligned_cols=154 Identities=25% Similarity=0.315 Sum_probs=116.4
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC----------
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN---------- 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N---------- 367 (902)
+..+.+.+|++++|.|.+.+ .+.|++++..... ........+|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~----~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 82 (289)
T 3ejj_X 11 GPELVVEPGETVTLRCVSNG----SVEWDGPISPYWT----LDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIH 82 (289)
T ss_dssp SSEEEECTTCCEEEEEECSS----CCEEECSCSSSSE----ECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEE
T ss_pred CceEEECCCCCEEEEEEeCC----cEEEccCCCceEE----EeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEE
Confidence 45678999999999999988 4999986543211 11223456899999999999999999987
Q ss_pred ----CCCE-EEEcCceeeeecCceEEEEEEeeccCCce-EEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCC
Q psy12803 368 ----VPPQ-ILIRNRRVGVPIGRTATLECEVEAFPLSV-RYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNI 441 (902)
Q Consensus 368 ----~~P~-i~~~p~~~~v~~G~~v~L~C~a~g~P~P~-v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~ 441 (902)
.+|. +...+..+.+.+|+++.|.|.+.+.|.+. +.|++.++..... ..++.... .. .|.|.+++.
T Consensus 83 l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~-~~~~~~~~--~~------~L~i~~v~~ 153 (289)
T 3ejj_X 83 LYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLR-KTVYFFSP--WR------GFIIRKAKV 153 (289)
T ss_dssp EEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCT-TCCEEEET--TT------EEEESSCCG
T ss_pred EEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCC-CccEEECC--CC------CEEEeeccc
Confidence 2232 55566778899999999999999987775 9998766665432 23333321 22 399999999
Q ss_pred CCCeEEEEEEE-eCCceeEEEEEEEeec
Q psy12803 442 SDFDTYRCISK-NEVDIAKGSLILFESN 468 (902)
Q Consensus 442 ~DsG~YtC~A~-N~~G~~~~s~~L~V~~ 468 (902)
+|+|.|+|.|. |..+..+..+.|.|..
T Consensus 154 ~d~G~Y~C~a~~~~~~~~~~~~~l~V~~ 181 (289)
T 3ejj_X 154 LDSNTYVCKTMVNGRESTSTGIWLKVNR 181 (289)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEES
T ss_pred ccCEEEEEEEEeCCCccccccEEEEEEE
Confidence 99999999999 5556667888888875
No 158
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=2.8e-16 Score=166.84 Aligned_cols=169 Identities=20% Similarity=0.250 Sum_probs=111.6
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCC--Ccc--cc-c-----------CCccceec-----cCCcEEEEee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSE--NKP--IT-L-----------GSWKDSAV-----ASSTLNFTRI 353 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~--~~~--~~-~-----------~~~~~~~~-----~~~sL~I~~V 353 (902)
.+..+.+.+|++|+|.|.+.+.| .+.|.|+|++ ..+ +. . ...+.... ...+|+|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (257)
T 1f3r_B 6 ESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSL 85 (257)
T ss_dssp EECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESC
T ss_pred CCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCC
Confidence 34456799999999999999875 7899999863 111 10 0 01122221 1248999999
Q ss_pred eeecCceeEEeecCCC---------C------EEEE-----------------------cCceeeeecCceEEEEEEeec
Q psy12803 354 NRINMGAYMCLADNVP---------P------QILI-----------------------RNRRVGVPIGRTATLECEVEA 395 (902)
Q Consensus 354 t~~DsG~YtC~A~N~~---------P------~i~~-----------------------~p~~~~v~~G~~v~L~C~a~g 395 (902)
+.+|+|.|+|.|.|.. . .+.+ .+..+.+.+|++++|.|.+.+
T Consensus 86 ~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 165 (257)
T 1f3r_B 86 QTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQ 165 (257)
T ss_dssp CTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSS
T ss_pred CcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECC
Confidence 9999999999997731 0 1111 133456789999999999999
Q ss_pred cCCceEEEEe--cCCeee--ec-C-------CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEE
Q psy12803 396 FPLSVRYWEF--IDGTLI--EH-D-------GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLI 463 (902)
Q Consensus 396 ~P~P~v~W~k--~~~~l~--~~-~-------~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~ 463 (902)
.|.+.+.|++ ++..+. .. . ..++.+... ....+|.|.+++.+|+|.|+|.|.|..........
T Consensus 166 ~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-----~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~ 240 (257)
T 1f3r_B 166 NINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGS-----GTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTK 240 (257)
T ss_dssp CCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-----BTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCE
T ss_pred cCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecC-----CCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEE
Confidence 9989999998 343321 10 0 122222111 11346999999999999999999997522223445
Q ss_pred EEeecCC
Q psy12803 464 LFESNAK 470 (902)
Q Consensus 464 L~V~~~p 470 (902)
|.|...+
T Consensus 241 l~V~~~~ 247 (257)
T 1f3r_B 241 LELKAAE 247 (257)
T ss_dssp ECCSSSC
T ss_pred EEEeCCC
Confidence 6665433
No 159
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.65 E-value=9.9e-16 Score=162.54 Aligned_cols=167 Identities=20% Similarity=0.271 Sum_probs=111.5
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCc--c--cc-c--------CCcccee-----ccCCcEEEEeeeeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENK--P--IT-L--------GSWKDSA-----VASSTLNFTRINRINM 358 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~--~--~~-~--------~~~~~~~-----~~~~sL~I~~Vt~~Ds 358 (902)
.+..+.+.+|++|+|.|.+.+.|.+.+.|+|.... + +. . ...+... ....+|+|.+++.+|+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Ds 88 (256)
T 3tf7_C 9 PDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDS 88 (256)
T ss_dssp SCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGC
T ss_pred cCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccC
Confidence 44568899999999999999999999999984311 1 00 0 0111111 1234799999999999
Q ss_pred ceeEEeecCC--------------------------------------CCEEEEcCceeeeecCceEEEEEEeeccCCce
Q psy12803 359 GAYMCLADNV--------------------------------------PPQILIRNRRVGVPIGRTATLECEVEAFPLSV 400 (902)
Q Consensus 359 G~YtC~A~N~--------------------------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~ 400 (902)
|.|+|.+.|. ++.+...+..+.+.+|++++|.|.+.+. .+.
T Consensus 89 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~~ 167 (256)
T 3tf7_C 89 AVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS-HNY 167 (256)
T ss_dssp SEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC-CSE
T ss_pred EEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC-ceE
Confidence 9999999771 2234445566678899999999999887 679
Q ss_pred EEEEecCC--ee--eec---C--------CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeE--EEEE
Q psy12803 401 RYWEFIDG--TL--IEH---D--------GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAK--GSLI 463 (902)
Q Consensus 401 v~W~k~~~--~l--~~~---~--------~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~--~s~~ 463 (902)
+.|++... .+ +.. . ..++.+..... ...+|.|.+++.+|+|.|+|.|.|..|... ...+
T Consensus 168 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt~ 243 (256)
T 3tf7_C 168 MYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQ----EDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGSK 243 (256)
T ss_dssp EEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSS----SBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCEE
T ss_pred EEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCC----CeEEEEECCCCHHHCEEEEEEecCCCCccEECCCeE
Confidence 99988431 11 100 0 11111111111 134699999999999999999999877542 2334
Q ss_pred EEeec
Q psy12803 464 LFESN 468 (902)
Q Consensus 464 L~V~~ 468 (902)
|.|..
T Consensus 244 l~v~~ 248 (256)
T 3tf7_C 244 LTVLE 248 (256)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 55543
No 160
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.65 E-value=1.1e-15 Score=165.06 Aligned_cols=159 Identities=13% Similarity=0.198 Sum_probs=116.5
Q ss_pred cEEEEcCCeEEEEEecC-CCCCCceEEecCCCcccccCCccceecc--CCcEEEEeeeeecCceeEEeecC---C-----
Q psy12803 300 PIVVREGDNVRLRCVAT-GHPKPSIIWKTSENKPITLGSWKDSAVA--SSTLNFTRINRINMGAYMCLADN---V----- 368 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~-G~P~p~v~W~k~~~~~~~~~~~~~~~~~--~~sL~I~~Vt~~DsG~YtC~A~N---~----- 368 (902)
.+.|.+|+++.|.|... +.|.+.|.|+|++..+...... ..... ..+|.|.+++.+|+|.|+|.|.| .
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~-~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~ 88 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRL-EVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYL 88 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTE-EEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEEE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCE-EEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEEE
Confidence 36788999999998876 5899999999987665432221 11122 24899999999999999999998 0
Q ss_pred -----------------CCEEEEcCc-eeeeecCceEEEEEEee-ccCCceEEEEecCCeeeecCCceEEEeecCCCcee
Q psy12803 369 -----------------PPQILIRNR-RVGVPIGRTATLECEVE-AFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQ 429 (902)
Q Consensus 369 -----------------~P~i~~~p~-~~~v~~G~~v~L~C~a~-g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~ 429 (902)
+|.+...+. ...+.+|+++.|.|.+. +.|.+.+.|++++..+....... +.......
T Consensus 89 l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~--~~~~~~~~-- 164 (312)
T 2y23_A 89 IDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYK--MHIDRNTG-- 164 (312)
T ss_dssp ECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCE--EEEETTTT--
T ss_pred EEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEE--EEEccCCC--
Confidence 444444333 67889999999999999 89999999999887765433322 22221111
Q ss_pred eEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 430 YIMQLNISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 430 ~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
..+|.|.+++.+|+|.|+|.|.|........+.+
T Consensus 165 -~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~ 198 (312)
T 2y23_A 165 -IIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVL 198 (312)
T ss_dssp -EEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEE
T ss_pred -EEEEEEccCCcccCEeEEEEEEeCCceEEEEEEE
Confidence 3569999999999999999998866555444443
No 161
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.64 E-value=2.4e-16 Score=167.49 Aligned_cols=140 Identities=16% Similarity=0.124 Sum_probs=107.7
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC----------
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN---------- 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N---------- 367 (902)
.....+.+|++++|.|.+. |.+.++| ++..+.. . ...+.|.|..+..+|+|.|+|.|.|
T Consensus 105 ~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~-~------~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s 173 (265)
T 2oz4_A 105 LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQP-L------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKN 173 (265)
T ss_dssp ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSC-C------SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEE
T ss_pred cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccC-C------CCcEEEEEccccccCCceEEEEEEcCCCCCccccc
Confidence 3456788999999999998 8999999 4544311 1 1235789999999999999999975
Q ss_pred --------CCCEEEEc--CceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEe
Q psy12803 368 --------VPPQILIR--NRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 368 --------~~P~i~~~--p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
.+|.+... +..+.+.+|++++|.|.+.|.|.|.+.|++++..+.. .+. | .
T Consensus 174 ~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~------------~g~------~--~ 233 (265)
T 2oz4_A 174 QTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLP------------IGE------S--V 233 (265)
T ss_dssp EEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECC------------TTS------C--E
T ss_pred ccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCC------------CCc------E--E
Confidence 12222221 3356789999999999999999999999998872211 111 2 2
Q ss_pred ccCCCCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 438 NVNISDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
.++.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 234 ~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 234 TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 3788999999999999999999999999875
No 162
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.64 E-value=1.2e-15 Score=163.80 Aligned_cols=155 Identities=17% Similarity=0.239 Sum_probs=106.5
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCc----cccc--------CCccceecc---CCcEEEEeeeeecCcee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENK----PITL--------GSWKDSAVA---SSTLNFTRINRINMGAY 361 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~----~~~~--------~~~~~~~~~---~~sL~I~~Vt~~DsG~Y 361 (902)
.+..+.+.+|++|+|.|.+.+.|.+.|.|+|++.. .+.. ...+..... ..+|+|.+++.+|+|.|
T Consensus 18 ~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 97 (276)
T 3auv_A 18 SPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATY 97 (276)
T ss_dssp ECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEE
Confidence 45668899999999999999999999999986531 1110 011222211 23799999999999999
Q ss_pred EEeecC---------------CCC--------------EEEEcCceeeeecCceEEEEEEeeccC--CceEEEEecC--C
Q psy12803 362 MCLADN---------------VPP--------------QILIRNRRVGVPIGRTATLECEVEAFP--LSVRYWEFID--G 408 (902)
Q Consensus 362 tC~A~N---------------~~P--------------~i~~~p~~~~v~~G~~v~L~C~a~g~P--~P~v~W~k~~--~ 408 (902)
+|.|.| .++ .+...+..+.+.+|++++|.|.+.+.| .+.+.|++++ .
T Consensus 98 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~ 177 (276)
T 3auv_A 98 YCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGK 177 (276)
T ss_dssp EEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTC
T ss_pred EEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCC
Confidence 999988 111 112234456788999999999999887 5899999864 1
Q ss_pred ee--ee-------------cCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeC
Q psy12803 409 TL--IE-------------HDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNE 454 (902)
Q Consensus 409 ~l--~~-------------~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~ 454 (902)
.+ +. ....++.+..... ....+|.|.+++.+|+|.|+|.|.|.
T Consensus 178 ~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 178 CLEWVAGITPAGGYTYYADSVKGRFTISADTS---KNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp CEEEEEEECGGGCCEEECTTTTTTEEEEEEGG---GTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CcEEEEEEeccCCccccccccCCcEEEEecCC---CcEEEEEECCCChhHCEEEEEEEEcC
Confidence 11 10 0112333222110 11246999999999999999999998
No 163
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.64 E-value=1.2e-16 Score=166.06 Aligned_cols=164 Identities=14% Similarity=0.191 Sum_probs=108.2
Q ss_pred CCcEEEEcCCeEEEEEecCCCC-CC-ceEEecCCC--cc--cc--------cCCccceec---cCCcEEEEeeeeecCce
Q psy12803 298 SSPIVVREGDNVRLRCVATGHP-KP-SIIWKTSEN--KP--IT--------LGSWKDSAV---ASSTLNFTRINRINMGA 360 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P-~p-~v~W~k~~~--~~--~~--------~~~~~~~~~---~~~sL~I~~Vt~~DsG~ 360 (902)
+..+.+.+|++|+|.|.+.+.+ .+ .|.|+|++. .+ +. ....+.... .+.+|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 5567789999999999999854 34 699998642 11 00 001111111 22489999999999999
Q ss_pred eEEeecCCC---------------------CEEEEcCceeeeecCceEEEEEEeeccC-C-ceEEEEecCCeeeecCCce
Q psy12803 361 YMCLADNVP---------------------PQILIRNRRVGVPIGRTATLECEVEAFP-L-SVRYWEFIDGTLIEHDGVK 417 (902)
Q Consensus 361 YtC~A~N~~---------------------P~i~~~p~~~~v~~G~~v~L~C~a~g~P-~-P~v~W~k~~~~l~~~~~~~ 417 (902)
|+|.|.|.. |.+...+....+.+|+.++|.|.+.+.+ . +.|.|++++..+... ...
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~-~~~ 184 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAG-VET 184 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSS-EEE
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCC-ccc
Confidence 999998721 1111111111223588999999999864 3 389999977655321 110
Q ss_pred EEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEE
Q psy12803 418 YSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSL 462 (902)
Q Consensus 418 ~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~ 462 (902)
.......++.+...++|.|.++..+|+|.|+|.|.|.....+.++
T Consensus 185 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 185 TKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp CCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred cCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 111122334455667899999999999999999999987755444
No 164
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.64 E-value=1.8e-15 Score=156.96 Aligned_cols=159 Identities=16% Similarity=0.235 Sum_probs=110.9
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--cc--cc-c------------CCccceecc-----CCcEEEEe
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KP--IT-L------------GSWKDSAVA-----SSTLNFTR 352 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~--~~-~------------~~~~~~~~~-----~~sL~I~~ 352 (902)
.+..+.+.+|++|+|.|.+.+.+ .+.|.|+|... .+ +. . ...+..... +.+|+|.+
T Consensus 6 q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (220)
T 2fbj_H 6 ESGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSK 85 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECS
T ss_pred cCCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECC
Confidence 44568899999999999998866 67899998542 11 10 0 011222221 23899999
Q ss_pred eeeecCceeEEeecCCC---------------------CEEEEcCceeeeecCceEEEEEEeecc-CC--ceEEEEecCC
Q psy12803 353 INRINMGAYMCLADNVP---------------------PQILIRNRRVGVPIGRTATLECEVEAF-PL--SVRYWEFIDG 408 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N~~---------------------P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~--P~v~W~k~~~ 408 (902)
++.+|+|.|.|.+.|.. |.+...+ ...+.+|+.++|.|.+.+. |. +.|.|++++.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~ 164 (220)
T 2fbj_H 86 VRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGK 164 (220)
T ss_dssp CCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCS
T ss_pred CChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCE
Confidence 99999999999987621 2222211 2234578999999999987 76 7999998876
Q ss_pred eeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeE
Q psy12803 409 TLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAK 459 (902)
Q Consensus 409 ~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~ 459 (902)
.+....... ....++.+...+.|.|..+..+|.|.|+|.|.|..+...
T Consensus 165 ~~~~~~~~~---~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 165 DITTVNFPP---ALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp SCEEEECCC---EECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred ecceEecCc---eECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 542111111 113445666777899999999999999999999998754
No 165
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.63 E-value=6.4e-16 Score=162.18 Aligned_cols=161 Identities=17% Similarity=0.233 Sum_probs=110.3
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCC----------------CcccccC-Cccceec----cCCcEEEEeeee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSE----------------NKPITLG-SWKDSAV----ASSTLNFTRINR 355 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~----------------~~~~~~~-~~~~~~~----~~~sL~I~~Vt~ 355 (902)
.+..+.+.+|++|+|.|.+.+.+.+.|.|+|.. ....... ..+.... .+.+|.|.+++.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~ 86 (246)
T 4dzb_B 7 HPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHP 86 (246)
T ss_dssp ECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCG
T ss_pred CCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCH
Confidence 456688999999999999999999999999821 1111000 0111111 233799999999
Q ss_pred ecCceeEEeecCC------------------------CCEEEE-cCceeeeecCceEEEEEEeeccCCc--eEEEEecCC
Q psy12803 356 INMGAYMCLADNV------------------------PPQILI-RNRRVGVPIGRTATLECEVEAFPLS--VRYWEFIDG 408 (902)
Q Consensus 356 ~DsG~YtC~A~N~------------------------~P~i~~-~p~~~~v~~G~~v~L~C~a~g~P~P--~v~W~k~~~ 408 (902)
+|+|.|+|.+.|. +|.+.. .+....+.+|+.++|.|.+.+.|++ .+.|++++.
T Consensus 87 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 166 (246)
T 4dzb_B 87 EDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGK 166 (246)
T ss_dssp GGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred HHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCE
Confidence 9999999999851 222222 2222334569999999999997654 899998776
Q ss_pred eeeecCCceEEEee------cCCCceeeEeEEEEeccCCCC-CeEEEEEEEeCCceeE
Q psy12803 409 TLIEHDGVKYSISD------VDKGSYQYIMQLNISNVNISD-FDTYRCISKNEVDIAK 459 (902)
Q Consensus 409 ~l~~~~~~~~~~~~------~~~~s~~~~stL~I~~V~~~D-sG~YtC~A~N~~G~~~ 459 (902)
.+.. ........ ..++.+...+.|.|..+..+| .|.|+|+|.|......
T Consensus 167 ~l~~--~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 167 EVHS--GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EECT--TEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred ECCC--CcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 5532 11111100 135666777889999999888 9999999999866544
No 166
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.63 E-value=1.8e-15 Score=159.06 Aligned_cols=155 Identities=19% Similarity=0.196 Sum_probs=105.1
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCC--cc--ccc--------CCccceec---cCCcEEEEeeeeecCcee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN--KP--ITL--------GSWKDSAV---ASSTLNFTRINRINMGAY 361 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~--~~--~~~--------~~~~~~~~---~~~sL~I~~Vt~~DsG~Y 361 (902)
.+..+.+.+|++|+|.|.+.+.|.+.+.|+|+.. .+ +.. ...+.... ...+|+|.+++.+|+|.|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (242)
T 2znx_A 7 SPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMY 86 (242)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred cCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEE
Confidence 4566889999999999999999999999998542 11 100 01122111 123799999999999999
Q ss_pred EEeecCC---------------CC-------------EEEEcCceeeeecCceEEEEEEeeccC--CceEEEEecC--Ce
Q psy12803 362 MCLADNV---------------PP-------------QILIRNRRVGVPIGRTATLECEVEAFP--LSVRYWEFID--GT 409 (902)
Q Consensus 362 tC~A~N~---------------~P-------------~i~~~p~~~~v~~G~~v~L~C~a~g~P--~P~v~W~k~~--~~ 409 (902)
.|.|.|. ++ .+...+....+.+|++++|.|.+.+.| .+.+.|++.. ..
T Consensus 87 ~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~ 166 (242)
T 2znx_A 87 FCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNR 166 (242)
T ss_dssp EEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSC
T ss_pred EEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCC
Confidence 9999881 11 112222334688999999999999886 4789999853 22
Q ss_pred ee---e--c---------CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeC
Q psy12803 410 LI---E--H---------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNE 454 (902)
Q Consensus 410 l~---~--~---------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~ 454 (902)
+. . . ...++.+...... ...+|.|.+++.+|+|.|+|.|.|.
T Consensus 167 ~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 167 LEYMGYVSYSGSTYYNPSLKSRISITRDTSK---NQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EEEEEEECTTSCEEECGGGTTCEEEEEETTT---TEEEEEECSCCGGGCEEEEEEETTS
T ss_pred cEEEEEEecCCccccCccccCcEEEEecCCC---CEEEEEECCCCcCcCEEEEEeccCC
Confidence 21 0 0 1223333221111 1346999999999999999999984
No 167
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.63 E-value=2.4e-15 Score=158.96 Aligned_cols=155 Identities=16% Similarity=0.244 Sum_probs=103.7
Q ss_pred cCCcEEEEcCCeEEEEEecCCC--CCCceEEecCCCc--cc--cc--------CCccceec---cCCcEEEEeeeeecCc
Q psy12803 297 SSSPIVVREGDNVRLRCVATGH--PKPSIIWKTSENK--PI--TL--------GSWKDSAV---ASSTLNFTRINRINMG 359 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~--P~p~v~W~k~~~~--~~--~~--------~~~~~~~~---~~~sL~I~~Vt~~DsG 359 (902)
.+..+.+.+|++|+|.|.+.+. |.+.+.|+|.+.. +. .. ...+.... ...+|.|.+++.+|+|
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 87 (256)
T 3ux9_B 8 QPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEA 87 (256)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred cCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCE
Confidence 3445789999999999999986 7889999985321 10 00 00111111 1237999999999999
Q ss_pred eeEEeecC-----------------CCC---------------------EEEEcCceeeeecCceEEEEEEeeccC--Cc
Q psy12803 360 AYMCLADN-----------------VPP---------------------QILIRNRRVGVPIGRTATLECEVEAFP--LS 399 (902)
Q Consensus 360 ~YtC~A~N-----------------~~P---------------------~i~~~p~~~~v~~G~~v~L~C~a~g~P--~P 399 (902)
.|+|.+.| .++ .+. .+....+.+|++++|.|.+.+.| .+
T Consensus 88 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~G~~v~L~C~~~~~~~~~~ 166 (256)
T 3ux9_B 88 DYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLV-ESGGGLVQPGGSLRLSCAASGFTFSSY 166 (256)
T ss_dssp EEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEE-EECCEEECTTCCEEEEEEEESSCGGGS
T ss_pred EEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEE-cCCCeEEcCCCeEEEEEEEeCCccccc
Confidence 99999976 111 122 22334588999999999999877 78
Q ss_pred eEEEEecC--Ceee-----ec----------CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCC
Q psy12803 400 VRYWEFID--GTLI-----EH----------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEV 455 (902)
Q Consensus 400 ~v~W~k~~--~~l~-----~~----------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~ 455 (902)
.+.|+++. ..+. .. ...++.+...... ...+|.|.+++.+|+|.|+|.|.|..
T Consensus 167 ~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 167 AMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSK---NTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTT---TEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCC---CEEEEEECCCChhhCEEEEEEEEcCC
Confidence 99999863 2211 00 0113333322211 13469999999999999999999964
No 168
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=3.1e-15 Score=156.15 Aligned_cols=154 Identities=18% Similarity=0.224 Sum_probs=105.1
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC----CCceEEecCCC--cc--ccc--------CCccceec---cCCcEEEEeeeeec
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP----KPSIIWKTSEN--KP--ITL--------GSWKDSAV---ASSTLNFTRINRIN 357 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P----~p~v~W~k~~~--~~--~~~--------~~~~~~~~---~~~sL~I~~Vt~~D 357 (902)
.+..+.+.+|++|+|.|.+.+.| .+.|.|+|++. .+ +.. ...+.... ...+|+|.+++.+|
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (240)
T 1moe_A 7 SPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADD 86 (240)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhh
Confidence 45668899999999999999988 88999999632 11 100 01111111 12279999999999
Q ss_pred CceeEEeecC---------------C------CCEEEEcCceeeeecCceEEEEEEeeccCC--ceEEEEecC--Ceeee
Q psy12803 358 MGAYMCLADN---------------V------PPQILIRNRRVGVPIGRTATLECEVEAFPL--SVRYWEFID--GTLIE 412 (902)
Q Consensus 358 sG~YtC~A~N---------------~------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~--P~v~W~k~~--~~l~~ 412 (902)
+|.|+|.|.| . ++.+...+....+.+|++++|.|.+.+.|. +.+.|+++. ..+..
T Consensus 87 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~ 166 (240)
T 1moe_A 87 VATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEW 166 (240)
T ss_dssp CEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEE
T ss_pred CEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEE
Confidence 9999999988 1 112333455567889999999999999874 589999863 22100
Q ss_pred ----c-----------CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEe
Q psy12803 413 ----H-----------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKN 453 (902)
Q Consensus 413 ----~-----------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N 453 (902)
. ...++.+...... ...+|.|.+++.+|+|.|+|.|.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 167 IGRIDPANGNSKYVPKFQGKATITADTSS---NTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EEEEETTTTEEEECGGGTTTEEEEEETTT---TEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEEEcccCCccccCccccccEEEEEcccC---CEEEEEECcCCHHHCEEEEEEEEe
Confidence 0 0112222211111 135699999999999999999985
No 169
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.62 E-value=7.4e-16 Score=164.86 Aligned_cols=160 Identities=14% Similarity=0.174 Sum_probs=109.1
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCc--cceeccCCcEEEEeeeeecCceeEEeecC-----------
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSW--KDSAVASSTLNFTRINRINMGAYMCLADN----------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~--~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N----------- 367 (902)
..+.+|++|+|.|.+.+ +.+.+.|+|++..+...... ......+..|.|.+++.+|+|.|+|.+.|
T Consensus 16 ~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S 94 (257)
T 1b6u_A 16 PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPS 94 (257)
T ss_dssp SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCC
T ss_pred CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCccccccC
Confidence 56889999999999986 56789999987654321110 01112346899999999999999999864
Q ss_pred -----------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEE
Q psy12803 368 -----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 368 -----------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I 436 (902)
.+|.+...+. ..+.+|++|+|.|.+.+.+ +.+.|++++..+....... . ...+ ....+|.|
T Consensus 95 ~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~-~---~~~~--~~~~~l~I 166 (257)
T 1b6u_A 95 DPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAG-P---KVNG--TFQADFPL 166 (257)
T ss_dssp CCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCB-C---CSSS--CCBEEEEE
T ss_pred CCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccc-c---ccCC--ceeEEEEe
Confidence 1233333333 3578999999999998765 6899999887664321110 0 0000 12346999
Q ss_pred eccCCCCCeEEEEEEEeCCc-----eeEEEEEEEeecCCC
Q psy12803 437 SNVNISDFDTYRCISKNEVD-----IAKGSLILFESNAKT 471 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G-----~~~~s~~L~V~~~p~ 471 (902)
.+|+ |+|.|+|.|.|... ..+..+.|.|...+.
T Consensus 167 ~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~ 204 (257)
T 1b6u_A 167 GPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPS 204 (257)
T ss_dssp EECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-
T ss_pred cccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCC
Confidence 9998 99999999997632 224556777776543
No 170
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.62 E-value=5.5e-16 Score=169.15 Aligned_cols=157 Identities=13% Similarity=0.159 Sum_probs=101.2
Q ss_pred EEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccce--eccCCcEEEEeeeeecCceeEEeecC------------
Q psy12803 302 VVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDS--AVASSTLNFTRINRINMGAYMCLADN------------ 367 (902)
Q Consensus 302 ~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~--~~~~~sL~I~~Vt~~DsG~YtC~A~N------------ 367 (902)
.+.+|++++|.|.+.+ +.+.+.|+|++..+......... ......|.|.+++.+|+|.|+|.|.|
T Consensus 129 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~ 207 (316)
T 3vh8_G 129 LVKSGERVILQCWSDI-MFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSD 207 (316)
T ss_dssp EEETTCCEEEEEEESS-CCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCC
T ss_pred ccCCCCeEEEEEcCCC-CCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCC
Confidence 4889999999999965 56789999987765322111111 12345899999999999999999987
Q ss_pred ----------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEe
Q psy12803 368 ----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 368 ----------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
.+|.+...+. ..+.+|++++|.|.+. .|.+.+.|++++..+...... .. ...+ ....+|.|.
T Consensus 208 ~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~--~~--~~~~--~~~~~L~i~ 279 (316)
T 3vh8_G 208 PLDIVVTGPYEKPSLSAQPG-PKVQAGESVTLSCSSR-SSYDMYHLSREGGAHERRLPA--VR--KVNR--TFQADFPLG 279 (316)
T ss_dssp CEEEEEECSSCCCEEEEESC-SCCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEEEEC--EE--CTTS--CEEEEEECC
T ss_pred CEEEEecCCCCCCeEEeCCC-CeecCCCcEEEEEECC-CCCcEEEEEECCCcCCCceec--ee--ccCC--ceeEEEEcC
Confidence 1233333332 2567899999999997 477899999988765321110 00 1111 123569999
Q ss_pred ccCCCCCeEEEEEEEeCCce-----eEEEEEEEeecC
Q psy12803 438 NVNISDFDTYRCISKNEVDI-----AKGSLILFESNA 469 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G~-----~~~s~~L~V~~~ 469 (902)
+++ |+|.|+|.|.|..+. .+..+.|.|...
T Consensus 280 ~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 314 (316)
T 3vh8_G 280 PAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGN 314 (316)
T ss_dssp -------CEEEEEEEBTTBTTEECCCCCCEEC-----
T ss_pred CcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCC
Confidence 999 999999999997663 345566666544
No 171
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.62 E-value=2.4e-15 Score=159.22 Aligned_cols=157 Identities=16% Similarity=0.219 Sum_probs=108.8
Q ss_pred eecCCcEEEEcCCeEEEEEecCCC--CCCceEEecCCCc--cc---ccC------------Cccceec--c---CCcEEE
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGH--PKPSIIWKTSENK--PI---TLG------------SWKDSAV--A---SSTLNF 350 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~--P~p~v~W~k~~~~--~~---~~~------------~~~~~~~--~---~~sL~I 350 (902)
...+..+++.+|++|+|.|.+.+. +.+.+.|+|.... +. ... ..+.... . ..+|+|
T Consensus 10 ~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 89 (256)
T 3juy_B 10 LVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMEL 89 (256)
T ss_dssp EEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred EEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEE
Confidence 345677899999999999999883 6788999974311 10 000 1122222 1 126999
Q ss_pred EeeeeecCceeEEeecCC-----------------------------------------CCEEEEcCceeeeecCceEEE
Q psy12803 351 TRINRINMGAYMCLADNV-----------------------------------------PPQILIRNRRVGVPIGRTATL 389 (902)
Q Consensus 351 ~~Vt~~DsG~YtC~A~N~-----------------------------------------~P~i~~~p~~~~v~~G~~v~L 389 (902)
.+++.+|+|.|.|.+.|. ++.+...+..+.+.+|++|+|
T Consensus 90 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L 169 (256)
T 3juy_B 90 RSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATF 169 (256)
T ss_dssp CSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEEE
T ss_pred CCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEE
Confidence 999999999999999763 344555666778899999999
Q ss_pred EEEeeccCC-ceEEEEecC--Ceee--ec--------CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCc
Q psy12803 390 ECEVEAFPL-SVRYWEFID--GTLI--EH--------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 390 ~C~a~g~P~-P~v~W~k~~--~~l~--~~--------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G 456 (902)
.|.+.+.|. +.+.|++.. ..+. .. ...++.+.... ...+|.|.+++.+|+|.|+|.|.|...
T Consensus 170 ~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 170 SCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSG-----TDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp EEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred EEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccC-----CEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 999999886 899998842 2211 11 11222222111 134699999999999999999998644
No 172
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.62 E-value=4.3e-16 Score=177.25 Aligned_cols=166 Identities=15% Similarity=0.244 Sum_probs=117.3
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCC--CCceEEecC--CCcccc---------------cCCccceec-----cCCcEEE
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTS--ENKPIT---------------LGSWKDSAV-----ASSTLNF 350 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~--~~~~~~---------------~~~~~~~~~-----~~~sL~I 350 (902)
+..+..+.+.+|++++|.|.+.+.| .+.|.|+|+ +..+.. ....+.... ...+|.|
T Consensus 222 ~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 301 (438)
T 1qgc_4 222 LVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQM 301 (438)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEE
Confidence 3345667899999999999999988 679999996 322210 001111111 1238999
Q ss_pred EeeeeecCceeEEeecC-----------------------CCCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEe
Q psy12803 351 TRINRINMGAYMCLADN-----------------------VPPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEF 405 (902)
Q Consensus 351 ~~Vt~~DsG~YtC~A~N-----------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k 405 (902)
.+++.+|+|.|+|.|.| .+|.+...+....+.+|++++|.|.+.+. |.| .|.|++
T Consensus 302 ~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 381 (438)
T 1qgc_4 302 SSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNS 381 (438)
T ss_dssp CSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGG
T ss_pred CCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEec
Confidence 99999999999999996 12222222222345689999999999997 888 999998
Q ss_pred cCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12803 406 IDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILF 465 (902)
Q Consensus 406 ~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~ 465 (902)
++..+......... ..+.+...++|.|.++..+| |.|+|.|.|..|.......|.
T Consensus 382 ~g~~~~~~~~~~~~----~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i~ 436 (438)
T 1qgc_4 382 GSLSSGVHTFPAVL----QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 436 (438)
T ss_dssp GTCCSSEEECCCEE----ETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEECC
T ss_pred CCCCCceeecCccc----cCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeecC
Confidence 87665322111111 12456667889999999999 999999999999877666553
No 173
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.62 E-value=5e-16 Score=177.69 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=99.3
Q ss_pred cEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC------------
Q psy12803 300 PIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------------ 367 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------------ 367 (902)
+..+.+|++++|.|.+. |.|.++| ++..+... ....+|.|.+++.+|+|.|+|.|.|
T Consensus 292 ~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~~-------~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~ 360 (450)
T 1z7z_I 292 KPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL-------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQT 360 (450)
T ss_dssp CSEEETTCEEEEEEEC---------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEE
T ss_pred CeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCCC-------CceEEEEEecCcccCCceEEEEEEcCCCCccccccee
Confidence 45799999999999998 8899999 44433111 1234899999999999999999986
Q ss_pred ------CCCEEEEcC--ceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEecc
Q psy12803 368 ------VPPQILIRN--RRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 368 ------~~P~i~~~p--~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V 439 (902)
.+|.+.... .++.+.+|++++|.|.+.|.|.|.|.|++++..+... +. .| ++
T Consensus 361 ~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~------------g~-----~~---~v 420 (450)
T 1z7z_I 361 RELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPI------------GE-----SV---TV 420 (450)
T ss_dssp EECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCT------------TS-----CE---EC
T ss_pred EEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCC------------CC-----eE---eE
Confidence 233333332 4668899999999999999999999999988743221 11 03 57
Q ss_pred CCCCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 440 NISDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
+.+|+|.|+|.|.|.+|..+.++.|.|..
T Consensus 421 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 421 TRDLEGTYLCRARSTQGEVTREVTVNVLS 449 (450)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ehhhCeEEEEEEEeCCCceeEEEEEEEEc
Confidence 88999999999999999999999999875
No 174
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.62 E-value=2.5e-15 Score=152.30 Aligned_cols=150 Identities=13% Similarity=0.050 Sum_probs=105.9
Q ss_pred CCcEEEEcCCeEEEEEecC--CCCCCceEEec--CCCcccc--------cCCccceeccCCcEEEEeeeeecCceeEEee
Q psy12803 298 SSPIVVREGDNVRLRCVAT--GHPKPSIIWKT--SENKPIT--------LGSWKDSAVASSTLNFTRINRINMGAYMCLA 365 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~--G~P~p~v~W~k--~~~~~~~--------~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A 365 (902)
...+...+|++|+|.|... +.+.+.|.|+| ++..+.. ....+.....+++|.|.+++.+|+|.|+|.|
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~ 85 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSI 85 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEE
Confidence 3457889999999999653 35678999999 7654421 1233455557789999999999999999999
Q ss_pred cCCC-C-----E--EEEc---CceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEE
Q psy12803 366 DNVP-P-----Q--ILIR---NRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQL 434 (902)
Q Consensus 366 ~N~~-P-----~--i~~~---p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL 434 (902)
.|.. . . +.+. ........+..++|.|.+.+.|.+.+.|++++..+ ... .. .|
T Consensus 86 ~n~~g~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~~----------~~------~i 148 (182)
T 1hnf_A 86 YDTKGKNVLEKIFDLKIQERVSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKHL-KLS----------QR------VI 148 (182)
T ss_dssp EETTSCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEESSCEE-EEE----------SS------CE
T ss_pred EeCCCceeEEEEEEEEEcCcCCCCEEEEccCcEEEEeEccCCCCCEEEEEECCEEC-CCC----------Cc------EE
Confidence 8811 1 1 1111 11111223457999999999999999999988766 110 11 14
Q ss_pred EEeccCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12803 435 NISNVNISDFDTYRCISKNEVDIAKGSLILF 465 (902)
Q Consensus 435 ~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~ 465 (902)
.+.. ..+|+|.|+|+|.|.++..+++..+.
T Consensus 149 ~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 149 THKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp EEEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred EEec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 4433 57899999999999999988877663
No 175
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.62 E-value=1.3e-15 Score=161.14 Aligned_cols=170 Identities=18% Similarity=0.180 Sum_probs=111.9
Q ss_pred ecCCcEEEEcCCeEEEEEecCC--CCCCceEEecCCC--ccccc--------------CCccceec-----cCCcEEEEe
Q psy12803 296 FSSSPIVVREGDNVRLRCVATG--HPKPSIIWKTSEN--KPITL--------------GSWKDSAV-----ASSTLNFTR 352 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G--~P~p~v~W~k~~~--~~~~~--------------~~~~~~~~-----~~~sL~I~~ 352 (902)
..+.++.+.+|++|+|.|.+.+ .+.+.+.|+|... ..... ...+.... ...+|+|.+
T Consensus 13 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 92 (257)
T 3gkz_A 13 QESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKS 92 (257)
T ss_dssp EEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred ECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECC
Confidence 3455677999999999999988 3578999998431 11000 01111111 122699999
Q ss_pred eeeecCceeEEeecCC--------------------------------CCEEEEcCceeeeecCceEEEEEEeeccCCc-
Q psy12803 353 INRINMGAYMCLADNV--------------------------------PPQILIRNRRVGVPIGRTATLECEVEAFPLS- 399 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N~--------------------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P- 399 (902)
++.+|+|.|+|.|.|. ++.+...+..+.+.+|++++|.|.+.+.|.+
T Consensus 93 v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 172 (257)
T 3gkz_A 93 VSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSS 172 (257)
T ss_dssp CCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGG
T ss_pred CChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccce
Confidence 9999999999999771 1344444556788999999999999999887
Q ss_pred eEEEEecC--Ceee--ecC--------CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeE-EEEEEEe
Q psy12803 400 VRYWEFID--GTLI--EHD--------GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAK-GSLILFE 466 (902)
Q Consensus 400 ~v~W~k~~--~~l~--~~~--------~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~-~s~~L~V 466 (902)
.+.|++.. ..+. ... ..++...... ...+|.|.+++.+|+|.|+|.|.|...... ...+|.|
T Consensus 173 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v 247 (257)
T 3gkz_A 173 HLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSG-----TSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEI 247 (257)
T ss_dssp GEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred EEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCC-----CEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEE
Confidence 99999842 2111 100 1122221111 134699999999999999999988644332 2334555
Q ss_pred ecCC
Q psy12803 467 SNAK 470 (902)
Q Consensus 467 ~~~p 470 (902)
...+
T Consensus 248 ~~~~ 251 (257)
T 3gkz_A 248 KRAP 251 (257)
T ss_dssp CCC-
T ss_pred EeCC
Confidence 5443
No 176
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.61 E-value=2.1e-16 Score=173.38 Aligned_cols=159 Identities=16% Similarity=0.292 Sum_probs=108.3
Q ss_pred CCcEEEEcCCeEEEEEecCCC-CCC---ceEEecCCCcccccCCccc------eeccCCcEEEEeeeeecCceeEEeecC
Q psy12803 298 SSPIVVREGDNVRLRCVATGH-PKP---SIIWKTSENKPITLGSWKD------SAVASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~-P~p---~v~W~k~~~~~~~~~~~~~------~~~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+..+.+.+|++++|.|.+.+. |.+ .|+|+|+++..+....... .....++|.|.+++.+|+|.|+|.|.|
T Consensus 120 p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n 199 (323)
T 2wqr_A 120 PSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTH 199 (323)
T ss_dssp CCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEEC
T ss_pred CCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEEC
Confidence 334457789999999999984 566 8999997655443221111 011234799999999999999999998
Q ss_pred C------------------CCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCeeeecCCceE-EEeecCCC
Q psy12803 368 V------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGTLIEHDGVKY-SISDVDKG 426 (902)
Q Consensus 368 ~------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~l~~~~~~~~-~~~~~~~~ 426 (902)
. +|.+...+.......|+.++|.|.+.+. |.+ .|.|++++..+... .... ......++
T Consensus 200 ~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~-~~~~~~~~~~~~g 278 (323)
T 2wqr_A 200 PHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDA-RHSTTQPRKTKGS 278 (323)
T ss_dssp TTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGG-GEEECCCEECSSS
T ss_pred CCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCC-ceeecCcccCCCC
Confidence 1 1222221111112239999999999984 543 79999987665321 1111 01123344
Q ss_pred ceeeEeEEEEeccCCCCCeEEEEEEEeCCce
Q psy12803 427 SYQYIMQLNISNVNISDFDTYRCISKNEVDI 457 (902)
Q Consensus 427 s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~ 457 (902)
.+...++|.|..+..+|+|.|+|.|.|....
T Consensus 279 ~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 279 GFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp SEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred cEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 6677888999999999999999999998876
No 177
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.61 E-value=5.6e-16 Score=165.89 Aligned_cols=154 Identities=24% Similarity=0.303 Sum_probs=113.6
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC---------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN--------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N--------- 367 (902)
.+.++.+.+|++++|.|.+.+. +.|+++....... ......++|.|.+++.+|+|.|+|.|.|
T Consensus 10 ~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~----~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 81 (292)
T 4dkd_C 10 SVPELVVKPGATVTLRCVGNGS----VEWDGPPSPHWTL----YSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAI 81 (292)
T ss_dssp CCSSCEECTTCCEEEEEECSSC----CCBCCCCCSSCEE----CCBTTEEEEEESSCCGGGCSCEEECCCC----CCEEE
T ss_pred CCCeEEEcCCCcEEEEEcCCCc----eEEccCCCCceEE----eccCceEEEEEcccccccCEEEEEEEccCCCCcceEE
Confidence 3456789999999999999984 8999754321110 1111235899999999999999999998
Q ss_pred -----CCCE-EEEcCceeeeecCceEEEEEEeeccCC--ceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEecc
Q psy12803 368 -----VPPQ-ILIRNRRVGVPIGRTATLECEVEAFPL--SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 368 -----~~P~-i~~~p~~~~v~~G~~v~L~C~a~g~P~--P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V 439 (902)
.++. +...+..+.+.+|+.+.|.|.+.+ |. +.+.|+++++..... ..++... .... |.|.++
T Consensus 82 ~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~-~~~~~~~--~~~~------L~i~~~ 151 (292)
T 4dkd_C 82 HLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMR-HTNYSFS--PWHG------FTIHRA 151 (292)
T ss_dssp CCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCS-SCCEECC--SSSC------CEETTC
T ss_pred EEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCcccc-CCccccc--CCce------EEECCC
Confidence 2332 345566788999999999999998 54 789999886554432 2222222 2222 999999
Q ss_pred CCCCCeEEEEEEEeCCceeE-EEEEEEeec
Q psy12803 440 NISDFDTYRCISKNEVDIAK-GSLILFESN 468 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~G~~~-~s~~L~V~~ 468 (902)
+.+|+|.|+|.|.|..+... ..+.|.|..
T Consensus 152 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 181 (292)
T 4dkd_C 152 KFIQSQDYQCSALMGGRKVMSISIRLKVQK 181 (292)
T ss_dssp CGGGCSEEEEEECSTTSCEECCCEEEEEEC
T ss_pred CHHHCeEEEEEEEeCCCceeEEEEEEEEeC
Confidence 99999999999999988664 478888876
No 178
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.61 E-value=1.6e-15 Score=173.46 Aligned_cols=163 Identities=13% Similarity=0.133 Sum_probs=119.6
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCC---ceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCC-----
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKP---SIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNV----- 368 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p---~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~----- 368 (902)
.+.+..+.+|++++|.|.+.+.|.+ .|+|+|++..+..... .....+++|.|.+++.+|+|.|+|.|.|.
T Consensus 92 ~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~--~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 169 (450)
T 1z7z_I 92 APLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA--VGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQG 169 (450)
T ss_dssp CCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEEC--CTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGT
T ss_pred cCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccc--cccccceEEEEEeeccccCceEEEEEEcccCCCC
Confidence 4556789999999999999998888 8999998765533221 11222358999999999999999999971
Q ss_pred --------CCEE-EE------cCce---eeeecCceEEEEEEeecc-C--CceEEEEecCCeeeecCCceEEEeecCCCc
Q psy12803 369 --------PPQI-LI------RNRR---VGVPIGRTATLECEVEAF-P--LSVRYWEFIDGTLIEHDGVKYSISDVDKGS 427 (902)
Q Consensus 369 --------~P~i-~~------~p~~---~~v~~G~~v~L~C~a~g~-P--~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s 427 (902)
.+.. .+ .+.. ..+.+|+.+.|.|.+.+. | .+.+.|++++..+.. ++... .. .
T Consensus 170 ~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~----~~~~~--~~-~ 242 (450)
T 1z7z_I 170 LELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYG--ND-S 242 (450)
T ss_dssp SCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC----EEEEE--TT-E
T ss_pred ceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc----eEEec--CC-c
Confidence 1111 11 1222 678899999999999999 7 789999988876533 22221 11 1
Q ss_pred eeeEeEEEEeccCCCCCe--EEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 428 YQYIMQLNISNVNISDFD--TYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 428 ~~~~stL~I~~V~~~DsG--~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
....+.+ +++.+|+| .|+|.|.|..|....++.|.|...+.
T Consensus 243 --~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~ 285 (450)
T 1z7z_I 243 --FSAKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPA 285 (450)
T ss_dssp --EEEEEEE-ECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred --eeEEEEE-EeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCC
Confidence 1222333 78999999 99999999999999999999887544
No 179
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.61 E-value=3.8e-15 Score=154.74 Aligned_cols=163 Identities=15% Similarity=0.254 Sum_probs=109.6
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--cc--cc-c------------CCccceecc-----CCcEEEEe
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KP--IT-L------------GSWKDSAVA-----SSTLNFTR 352 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~--~~-~------------~~~~~~~~~-----~~sL~I~~ 352 (902)
.+..+.+.+|++|+|.|.+.+.+ .+.|.|+|... .+ +. . ...+..... +.+|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (223)
T 1dee_B 6 ESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNS 85 (223)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECC
Confidence 34567899999999999998865 47899998542 11 10 0 011222221 24799999
Q ss_pred eeeecCceeEEeecCCC-----C-------EEEEc-----Ccee-------eeecCceEEEEEEeecc-CCc-eEEEEe-
Q psy12803 353 INRINMGAYMCLADNVP-----P-------QILIR-----NRRV-------GVPIGRTATLECEVEAF-PLS-VRYWEF- 405 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N~~-----P-------~i~~~-----p~~~-------~v~~G~~v~L~C~a~g~-P~P-~v~W~k- 405 (902)
++.+|+|.|.|.+.+.. . .+.+. +..+ .+.+|+.++|.|.+.+. |.| .|.|++
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 165 (223)
T 1dee_B 86 LRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYK 165 (223)
T ss_dssp CCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEET
T ss_pred CCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEcc
Confidence 99999999999997631 1 11121 0111 23478999999999987 877 999999
Q ss_pred cCCeeeecCCceEEEeecCCCceeeEeEEEEeccCC--CCCeEEEEEEEeCCceeEEEE
Q psy12803 406 IDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNI--SDFDTYRCISKNEVDIAKGSL 462 (902)
Q Consensus 406 ~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~--~DsG~YtC~A~N~~G~~~~s~ 462 (902)
++..+.. ..........+.+...+.|.|..... +|.|.|+|.|.|..+.....+
T Consensus 166 ~g~~l~~---~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 166 NNSDISS---TRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp TSCBCSC---EEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred CCCccce---eEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 6655422 11000001124566677899988876 889999999999998876654
No 180
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.61 E-value=6.7e-15 Score=154.61 Aligned_cols=155 Identities=18% Similarity=0.283 Sum_probs=104.0
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC-----CCceEEecCCC--cc--ccc--------CCccceec---cCCcEEEEeeeee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP-----KPSIIWKTSEN--KP--ITL--------GSWKDSAV---ASSTLNFTRINRI 356 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P-----~p~v~W~k~~~--~~--~~~--------~~~~~~~~---~~~sL~I~~Vt~~ 356 (902)
.+..+.+.+|++|+|.|.+.+.| .+.+.|+|.+. .+ +.. ...+.... ...+|+|.+++.+
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 86 (247)
T 1svz_A 7 TPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAE 86 (247)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred cCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHH
Confidence 45668899999999999999987 68999998542 11 100 01111111 1237999999999
Q ss_pred cCceeEEeecCC---------------C-------------CEEEEcCceeeeecCceEEEEEEeeccC--CceEEEEec
Q psy12803 357 NMGAYMCLADNV---------------P-------------PQILIRNRRVGVPIGRTATLECEVEAFP--LSVRYWEFI 406 (902)
Q Consensus 357 DsG~YtC~A~N~---------------~-------------P~i~~~p~~~~v~~G~~v~L~C~a~g~P--~P~v~W~k~ 406 (902)
|+|.|+|.+.|. + +.+...+....+.+|++++|.|.+.+.| .+.+.|+++
T Consensus 87 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 166 (247)
T 1svz_A 87 DLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQ 166 (247)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred HCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEe
Confidence 999999999881 1 1122222334588999999999999885 569999986
Q ss_pred C--Cee--ee---c----------CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeC
Q psy12803 407 D--GTL--IE---H----------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNE 454 (902)
Q Consensus 407 ~--~~l--~~---~----------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~ 454 (902)
. ..+ +. . ...++.+..... ....+|.|.+++.+|+|.|+|.|.|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 167 APGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTS---TSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp CTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGG---GTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CCCCCcEEEEEEEcCCCccccCccccCcEEEEEecC---CCEEEEEECCCChhHCEEEEEEEecc
Confidence 4 111 00 0 012222221111 11346999999999999999999995
No 181
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.61 E-value=3.2e-16 Score=161.05 Aligned_cols=152 Identities=16% Similarity=0.196 Sum_probs=104.7
Q ss_pred EEcCCeEEEEEecCCCC----CCceEEecCCCcccccCCc-c-----ceeccCCcEEEEeeeeecCceeEEeecC-----
Q psy12803 303 VREGDNVRLRCVATGHP----KPSIIWKTSENKPITLGSW-K-----DSAVASSTLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 303 v~eGe~v~L~C~a~G~P----~p~v~W~k~~~~~~~~~~~-~-----~~~~~~~sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
+.+|++++|.|.+.+.+ .+.|+|+|++..+...... . ......++|.|.+++.+|+|.|+|.|.|
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 77999999999999874 3489999988543211100 0 0111224799999999999999999998
Q ss_pred -------------CCCEEEEcCceeeeecCceEEEEEEeecc-CC-ceEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 368 -------------VPPQILIRNRRVGVPIGRTATLECEVEAF-PL-SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 368 -------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
.+|.+...+......+|+.++|.|.+.+. |. +.|.|++++..+... .........++.+...+
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~--~~~~~~~~~~g~~~~~s 172 (207)
T 2vol_A 95 PIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENY--KNTQPIMDTDGSYFVYS 172 (207)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCE--EECCCEECTTSCEEEEE
T ss_pred ceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCc--ccCCceECCCCCEEEEE
Confidence 12333222222122358999999999985 55 389999987755221 11111224556777888
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCc
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G 456 (902)
.|.|.....+|.|.|+|.|.|...
T Consensus 173 ~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 173 KLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp EEEEEHHHHSSCCEEEEEEECTTS
T ss_pred EEEECHHHcCCCCEEEEEEECCCC
Confidence 899988888899999999999864
No 182
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.60 E-value=5.6e-15 Score=159.30 Aligned_cols=169 Identities=17% Similarity=0.221 Sum_probs=113.1
Q ss_pred eeecCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCCc--cc--c-------------cCCccceec-----cCCcEE
Q psy12803 294 HIFSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSENK--PI--T-------------LGSWKDSAV-----ASSTLN 349 (902)
Q Consensus 294 ~i~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~~--~~--~-------------~~~~~~~~~-----~~~sL~ 349 (902)
.+..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.+.. +. . ....+.... ...+|+
T Consensus 29 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 108 (282)
T 1qok_A 29 KLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQ 108 (282)
T ss_dssp EEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEE
T ss_pred EEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEE
Confidence 34567778999999999999999875 689999996421 10 0 001122221 124799
Q ss_pred EEeeeeecCceeEEeecCCC----------------------------------CEEEEcCceeeeecCceEEEEEEeec
Q psy12803 350 FTRINRINMGAYMCLADNVP----------------------------------PQILIRNRRVGVPIGRTATLECEVEA 395 (902)
Q Consensus 350 I~~Vt~~DsG~YtC~A~N~~----------------------------------P~i~~~p~~~~v~~G~~v~L~C~a~g 395 (902)
|.+++.+|+|.|+|.+.|.. +.+...+..+.+.+|++++|.|.+.+
T Consensus 109 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 188 (282)
T 1qok_A 109 LSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASS 188 (282)
T ss_dssp ECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESS
T ss_pred ECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecC
Confidence 99999999999999998721 11222344566889999999999999
Q ss_pred cCCceEEEEec--CCeee--ec--------CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee-EEEE
Q psy12803 396 FPLSVRYWEFI--DGTLI--EH--------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA-KGSL 462 (902)
Q Consensus 396 ~P~P~v~W~k~--~~~l~--~~--------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~-~~s~ 462 (902)
.| +.+.|++. +..+. .. ...++...... ...+|.|.+++.+|+|.|+|.|.|..... ....
T Consensus 189 ~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt 262 (282)
T 1qok_A 189 SV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSG-----TSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGT 262 (282)
T ss_dssp CC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSCCGGGCEEEEEEECSSSSCEECCCE
T ss_pred CC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCC-----CEEEEEEccCChhHCEEEEEEEeeCCCceEeCCE
Confidence 99 99999983 43321 10 01223222111 13469999999999999999999864322 2345
Q ss_pred EEEeec
Q psy12803 463 ILFESN 468 (902)
Q Consensus 463 ~L~V~~ 468 (902)
.|.|..
T Consensus 263 ~l~V~~ 268 (282)
T 1qok_A 263 KLELKR 268 (282)
T ss_dssp EEEEC-
T ss_pred EEEEec
Confidence 566654
No 183
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.60 E-value=2e-15 Score=151.04 Aligned_cols=147 Identities=15% Similarity=0.092 Sum_probs=100.4
Q ss_pred cEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccC----------Ccccee-ccCCcEEEEeeeeecCceeEEeecCC
Q psy12803 300 PIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLG----------SWKDSA-VASSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 300 ~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~----------~~~~~~-~~~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
.+.+.+|++|+|.|.+.. |.+.|.|+|++..+.... ..+... ..+++|+|.+++.+|+|.|+|.|.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 467899999999999965 889999999765432111 112222 25679999999999999999999881
Q ss_pred CC----EEEE--cC-ceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCC
Q psy12803 369 PP----QILI--RN-RRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNI 441 (902)
Q Consensus 369 ~P----~i~~--~p-~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~ 441 (902)
.- .+.+ .+ ............|.|.+.+.|.|.+.|++++..+..... ..|.+. ..
T Consensus 83 ~~~~~~~L~V~~~~~~p~i~~~~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~----------------~~l~~~--~~ 144 (171)
T 1ccz_A 83 TDTMKFFLYVLEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ----------------KTMSYQ--WT 144 (171)
T ss_dssp CSCEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESS----------------SEEEEE--CS
T ss_pred CCcEEEEEEEECcCCCCEEEEecCCcEEEEEeCCCCCcEEEEEECCEECcCCcc----------------eEEEEe--cc
Confidence 10 1111 10 011111222248999999999999999987766542111 114443 37
Q ss_pred CCCeEEEEEEEeCCceeEEEEEEE
Q psy12803 442 SDFDTYRCISKNEVDIAKGSLILF 465 (902)
Q Consensus 442 ~DsG~YtC~A~N~~G~~~~s~~L~ 465 (902)
.|+|.|+|.|.|.++..+.++.|.
T Consensus 145 ~~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 145 NLRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp CCSSCEEEEEEETTEEEEEEECCC
T ss_pred CCCceEEEEEEcccCcccceeEEe
Confidence 899999999999999988776653
No 184
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.60 E-value=2.2e-16 Score=163.73 Aligned_cols=153 Identities=18% Similarity=0.190 Sum_probs=105.7
Q ss_pred EEcCCeEEEEEecCCC---CC-CceEEecCCCcccccCCcc------ceeccCCcEEEEeeeeecCceeEEeecCC----
Q psy12803 303 VREGDNVRLRCVATGH---PK-PSIIWKTSENKPITLGSWK------DSAVASSTLNFTRINRINMGAYMCLADNV---- 368 (902)
Q Consensus 303 v~eGe~v~L~C~a~G~---P~-p~v~W~k~~~~~~~~~~~~------~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~---- 368 (902)
+.+|++++|.|.+.+. |. +.|+|+|++..+....... ......++|.|.+++.+|+|.|+|.|.|.
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPS 102 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSS
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCC
Confidence 6799999999999986 43 7999999885542211000 01112347999999999999999999881
Q ss_pred --------------CCEEEEcCceeeeecCceEEEEEEeec-cCCc-eEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 369 --------------PPQILIRNRRVGVPIGRTATLECEVEA-FPLS-VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 369 --------------~P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
+|.+.+.+......+|+.++|.|.+.| +|.+ .|.|++++..+... .........++.+...+
T Consensus 103 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~--~~~~~~~~~~gt~~~~s 180 (218)
T 2rgs_A 103 PIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENY--KDTAPVLDSDGSYFIYS 180 (218)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCE--EECCCEECTTSCEEEEE
T ss_pred cceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCc--eecccEECCCCCEEEEE
Confidence 222322222111235899999999998 5766 89999988765321 11112224556677788
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCce
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVDI 457 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G~ 457 (902)
.|.|.....+|.|.|+|.|.|....
T Consensus 181 ~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 181 KLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp EEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred EEEECHHHcCCCCeEEEEEEcCCCC
Confidence 8988887777899999999998654
No 185
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.60 E-value=1.9e-15 Score=167.32 Aligned_cols=165 Identities=18% Similarity=0.254 Sum_probs=112.2
Q ss_pred ecCCcEEEEcCCeEEEEEecCCC--CCCceEEecCC--Ccccc---------------cCCccceec-----cCCcEEEE
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGH--PKPSIIWKTSE--NKPIT---------------LGSWKDSAV-----ASSTLNFT 351 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~--P~p~v~W~k~~--~~~~~---------------~~~~~~~~~-----~~~sL~I~ 351 (902)
..+..+.+.+|++|+|.|.+.+. +.+.|.|+|++ ..+.. ....+.... ...+|+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (344)
T 1za6_B 5 VQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELS 84 (344)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred eCCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEEC
Confidence 34566889999999999999986 46889999973 22210 001122222 12489999
Q ss_pred eeeeecCceeEEeecCC------------------CCEEEEcCceeeeecCceEEEEEEeecc-CC-ceEEEEecCCeee
Q psy12803 352 RINRINMGAYMCLADNV------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PL-SVRYWEFIDGTLI 411 (902)
Q Consensus 352 ~Vt~~DsG~YtC~A~N~------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k~~~~l~ 411 (902)
+++.+|+|.|+|.|.|. +|.+...+....+.+|+.++|.|.+.+. |. +.|.|++++..+.
T Consensus 85 ~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~ 164 (344)
T 1za6_B 85 SLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSG 164 (344)
T ss_dssp SCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTT
T ss_pred CCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCc
Confidence 99999999999999881 2233322222335689999999999987 65 7999988775431
Q ss_pred ecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 412 EHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 412 ~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
....... ....+.+...+.|.|.+++.+| |.|+|.|.|..+.......+
T Consensus 165 ~~~~~~~---~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~ 213 (344)
T 1za6_B 165 VHTFPAV---LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKV 213 (344)
T ss_dssp EEECCCE---ECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEE
T ss_pred eeECCCe---ECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEee
Confidence 1111111 1233445556789999999888 99999999998876544443
No 186
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.60 E-value=2.9e-15 Score=159.13 Aligned_cols=145 Identities=14% Similarity=0.143 Sum_probs=108.0
Q ss_pred EEEcCCeEEEEEecCC-CCCC--ceEEecCCCcccccCCccceeccCCcEEEEee---eeecCce--eEEeecC------
Q psy12803 302 VVREGDNVRLRCVATG-HPKP--SIIWKTSENKPITLGSWKDSAVASSTLNFTRI---NRINMGA--YMCLADN------ 367 (902)
Q Consensus 302 ~v~eGe~v~L~C~a~G-~P~p--~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~V---t~~DsG~--YtC~A~N------ 367 (902)
.+.+|++++|.|.+.+ .|.+ .|+|+|++..+.. .....+..|.|..+ +.+|+|. |+|.|.|
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~-----~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~ 88 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP-----TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQE 88 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC-----EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc-----eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcE
Confidence 6889999999999998 8877 9999998765432 23334457777766 7788885 9999998
Q ss_pred --------C--CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEe
Q psy12803 368 --------V--PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 368 --------~--~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
. +|.+. .....+.+|+.+.|.|.+. |.+.+.| ++..+.. .. ..+.|.|.
T Consensus 89 ~~~~l~V~~~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~-~~--------------~~~~l~i~ 147 (265)
T 2oz4_A 89 TLQTVTIYSFPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQP-LG--------------PRAQLLLK 147 (265)
T ss_dssp EEEEEEEECCCCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSC-CS--------------SEECCEEE
T ss_pred EEEEEEEeCCCCceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccC-CC--------------CcEEEEEc
Confidence 2 33333 3345688999999999998 8999999 5544411 11 12348899
Q ss_pred ccCCCCCeEEEEEEEeCC-ceeE---EEEEEEeecCCCC
Q psy12803 438 NVNISDFDTYRCISKNEV-DIAK---GSLILFESNAKTP 472 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~-G~~~---~s~~L~V~~~p~~ 472 (902)
.+..+|.|.|+|.|.|.. |... .++.|.|..+|..
T Consensus 148 ~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~ 186 (265)
T 2oz4_A 148 ATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRL 186 (265)
T ss_dssp CCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEEC
T ss_pred cccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCcc
Confidence 999999999999998644 7665 7788888776654
No 187
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.60 E-value=2.2e-15 Score=156.61 Aligned_cols=162 Identities=16% Similarity=0.209 Sum_probs=109.0
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC--CCceEEecCC--Cccc--c-------------cCCccceec-----cCCcEEEE
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSE--NKPI--T-------------LGSWKDSAV-----ASSTLNFT 351 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~--~~~~--~-------------~~~~~~~~~-----~~~sL~I~ 351 (902)
..+..+.+.+|++|+|.|.+.+.+ .+.|.|+|.. ..+. . ....+.... .+.+|+|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (225)
T 1op3_H 5 VESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMH 84 (225)
T ss_dssp EEECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred EcCCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEEC
Confidence 345567899999999999999876 7889999864 2111 0 001122222 13489999
Q ss_pred eeeeecCceeEEeecCCC------C--------EEEEc------Cc------eeeeecCceEEEEEEeecc-CCc-eEEE
Q psy12803 352 RINRINMGAYMCLADNVP------P--------QILIR------NR------RVGVPIGRTATLECEVEAF-PLS-VRYW 403 (902)
Q Consensus 352 ~Vt~~DsG~YtC~A~N~~------P--------~i~~~------p~------~~~v~~G~~v~L~C~a~g~-P~P-~v~W 403 (902)
+++.+|+|.|.|.+.|.. . .+.+. |. ...+.+|+.++|.|.+.+. |.| .|.|
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W 164 (225)
T 1op3_H 85 KMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW 164 (225)
T ss_dssp SCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEEC
T ss_pred CCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEE
Confidence 999999999999998731 1 11111 11 1123579999999999987 777 9999
Q ss_pred EecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEE
Q psy12803 404 EFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGS 461 (902)
Q Consensus 404 ~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s 461 (902)
++++..+........ ...++.+...++|.|.++..+| |.|+|.|.|..+.....
T Consensus 165 ~~~~~~~~~~~~~~~---~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 218 (225)
T 1op3_H 165 NSGALTSGVHTFPAV---LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 218 (225)
T ss_dssp CTTSCCTTCEECCCE---ECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEEEE
T ss_pred ecCCCcCCeEecCce---eCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCccEE
Confidence 887754211001111 1234456667889999999889 99999999987655433
No 188
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.59 E-value=7.9e-15 Score=153.56 Aligned_cols=169 Identities=12% Similarity=0.204 Sum_probs=108.7
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--cc--cc-c-----------CCccceecc-----CCcEEEEee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KP--IT-L-----------GSWKDSAVA-----SSTLNFTRI 353 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~--~~-~-----------~~~~~~~~~-----~~sL~I~~V 353 (902)
.+..+.+.+|++|+|.|.+.+.+ .+.+.|+|... .+ +. . ...+..... +.+|+|.++
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (232)
T 1dn0_B 6 QWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSV 85 (232)
T ss_dssp EECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCC
Confidence 44567899999999999998764 67899998541 11 10 0 012222221 228999999
Q ss_pred eeecCceeEEeec--CC-CC---------EEEEc------Cc------eeeeecC-ceEEEEEEeecc-CCc-eEEEEe-
Q psy12803 354 NRINMGAYMCLAD--NV-PP---------QILIR------NR------RVGVPIG-RTATLECEVEAF-PLS-VRYWEF- 405 (902)
Q Consensus 354 t~~DsG~YtC~A~--N~-~P---------~i~~~------p~------~~~v~~G-~~v~L~C~a~g~-P~P-~v~W~k- 405 (902)
+.+|+|.|.|.+. +. .+ .+.+. |. ...+.+| +.++|.|.+.+. |.| .|.|++
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~ 165 (232)
T 1dn0_B 86 TAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYK 165 (232)
T ss_dssp CGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEET
T ss_pred CcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcC
Confidence 9999999999997 31 01 11221 11 1123467 899999999986 877 999999
Q ss_pred cCCeeeecCCceEEEeecCCCceeeEeEEEEeccCC--CCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 406 IDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNI--SDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 406 ~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~--~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
++..+.. ..........+.+...++|.|..+.. +|.|.|+|.|.|..+.......|.|..
T Consensus 166 ~g~~l~~---~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~~ 227 (232)
T 1dn0_B 166 NNSDISS---TRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVIA 227 (232)
T ss_dssp TSCEECC---EEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC--
T ss_pred CCCceee---EEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCCC
Confidence 6655532 11000001124566678899999887 889999999999999887777666554
No 189
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.58 E-value=3.7e-15 Score=155.86 Aligned_cols=159 Identities=18% Similarity=0.300 Sum_probs=107.2
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcc-------------cccC--Cccceec----cCCcEEEEeeeeec
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKP-------------ITLG--SWKDSAV----ASSTLNFTRINRIN 357 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~-------------~~~~--~~~~~~~----~~~sL~I~~Vt~~D 357 (902)
.+..+.+.+|++|+|.|.+.+ +.+.|.|+|..... .... ..+.... .+.+|.|.+++.+|
T Consensus 8 ~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 86 (240)
T 3q5y_A 8 SPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELED 86 (240)
T ss_dssp ECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGG
T ss_pred CcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhH
Confidence 456688999999999999987 78899999832110 0000 0111111 23479999999999
Q ss_pred CceeEEeec--C---------------------CCCEEEE-cCceeeeecCceEEEEEEeec-cCCc-eEEEEecCCeee
Q psy12803 358 MGAYMCLAD--N---------------------VPPQILI-RNRRVGVPIGRTATLECEVEA-FPLS-VRYWEFIDGTLI 411 (902)
Q Consensus 358 sG~YtC~A~--N---------------------~~P~i~~-~p~~~~v~~G~~v~L~C~a~g-~P~P-~v~W~k~~~~l~ 411 (902)
+|.|.|.+. + .+|.+.. .+....+.+|+.++|.|.+.+ .|.+ .+.|++++..+.
T Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~ 166 (240)
T 3q5y_A 87 SAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVH 166 (240)
T ss_dssp CEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred CEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECc
Confidence 999999996 2 1222222 222233456899999999998 5666 789998776653
Q ss_pred ecCCceEE--EeecCCCceeeEeEEEEeccCCCC-CeEEEEEEEeCCcee
Q psy12803 412 EHDGVKYS--ISDVDKGSYQYIMQLNISNVNISD-FDTYRCISKNEVDIA 458 (902)
Q Consensus 412 ~~~~~~~~--~~~~~~~s~~~~stL~I~~V~~~D-sG~YtC~A~N~~G~~ 458 (902)
. ..... .....++.+...+.|.|..+..+| .|.|+|.|.|.....
T Consensus 167 ~--~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~~ 214 (240)
T 3q5y_A 167 S--GVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSE 214 (240)
T ss_dssp T--TEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred C--cEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 2 11110 112234556677889999999999 669999999976543
No 190
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.58 E-value=1.5e-14 Score=149.56 Aligned_cols=159 Identities=14% Similarity=0.229 Sum_probs=107.0
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCCc--ccc---c--------------CCccceec-----cCCcEEE
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSENK--PIT---L--------------GSWKDSAV-----ASSTLNF 350 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~~--~~~---~--------------~~~~~~~~-----~~~sL~I 350 (902)
.+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.... +.. . ...+.... ...+|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (221)
T 3m8o_H 6 ESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQM 85 (221)
T ss_dssp EESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEE
Confidence 45567899999999999998743 678999974321 100 0 01122221 1226999
Q ss_pred EeeeeecCceeEEeecCC--------------------CCEEEEcCceeeeecCceEEEEEEeec-cCC--ceEEEEecC
Q psy12803 351 TRINRINMGAYMCLADNV--------------------PPQILIRNRRVGVPIGRTATLECEVEA-FPL--SVRYWEFID 407 (902)
Q Consensus 351 ~~Vt~~DsG~YtC~A~N~--------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~--P~v~W~k~~ 407 (902)
.+++.+|+|.|.|.+.+. +|.+........ .+|+.++|.|.+.+ .|. +.+.|++++
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~-~~g~~v~L~C~~~~~~P~~~~~v~W~~~g 164 (221)
T 3m8o_H 86 NSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST-QPDGNVVIACLVQGFFPQEPLSVTWSESG 164 (221)
T ss_dssp CSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC-CCTTEEEEEEEEEEEBSSCSEEEEESCCS
T ss_pred CCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc-ccCCCEEEEEEEEeeECCCCEEEEEEECC
Confidence 999999999999999762 122221111111 57899999999998 676 489999877
Q ss_pred CeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee
Q psy12803 408 GTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA 458 (902)
Q Consensus 408 ~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~ 458 (902)
..+....... ......+.+...++|.|..+..+|+|.|+|.|.|..+..
T Consensus 165 ~~~~~~~~~~--~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 165 QGVTARNFPP--SQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp TTCEEEECCC--EECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred EECceEEcCc--eeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 6653211111 111234556667789999999999999999999988654
No 191
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.57 E-value=9.8e-15 Score=147.25 Aligned_cols=147 Identities=14% Similarity=0.135 Sum_probs=100.7
Q ss_pred CcEEEEcCCeEEEEEecCC-CCCCceEEecCC-Ccccc---------c-CC--cccee-ccCCcEEEEeeeeecCceeEE
Q psy12803 299 SPIVVREGDNVRLRCVATG-HPKPSIIWKTSE-NKPIT---------L-GS--WKDSA-VASSTLNFTRINRINMGAYMC 363 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G-~P~p~v~W~k~~-~~~~~---------~-~~--~~~~~-~~~~sL~I~~Vt~~DsG~YtC 363 (902)
.++.+.+|++|+|.|.+.. .+.+.|.|+|.+ ..+.. . .. .+... ..+++|.|.+++.+|+|.|+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 4578999999999999865 347899999953 22111 0 11 22233 456789999999999999999
Q ss_pred eecCCCC-----EEEE--c-CceeeeecCceEEEEEEe-eccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEE
Q psy12803 364 LADNVPP-----QILI--R-NRRVGVPIGRTATLECEV-EAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQL 434 (902)
Q Consensus 364 ~A~N~~P-----~i~~--~-p~~~~v~~G~~v~L~C~a-~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL 434 (902)
.+.+... .+.+ . +.......+.+++|.|.+ .+ |.|.+.|++++..+.. ... .+|
T Consensus 87 ~v~~~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~----------~~~------~~l 149 (180)
T 2dru_A 87 RMLHETEDQWKITMEVYEMVSKPMIYWECSNATLTCEVLEG-TDVELKLYQGKEHLRS----------LRQ------KTM 149 (180)
T ss_dssp EEESSSEEEEEEEEEEECCCCCCEEEEEGGGTEEEEECSSC-TTCEEEEEETTEEEEE----------ESS------SEE
T ss_pred EEEcCCeEEEEEEEEEECCCCCCEEEecCCCEEEEEEeCCC-CCCEEEEEECCeECcC----------CCC------CEE
Confidence 9876220 1111 1 111222356779999999 56 9999999988776531 111 126
Q ss_pred EEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 435 NISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 435 ~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
.+.. .+|+|.|+|.|.|.++..+.+..+
T Consensus 150 ~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 150 SYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp EEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred EEEE--hhcCccEEEEEecCcCccccceeE
Confidence 5633 789999999999999988766544
No 192
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.57 E-value=4.4e-15 Score=154.71 Aligned_cols=163 Identities=13% Similarity=0.242 Sum_probs=108.3
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCC----CceEEecCC--Ccc--c-cc-----------CCccceec-----cCCcEEEE
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPK----PSIIWKTSE--NKP--I-TL-----------GSWKDSAV-----ASSTLNFT 351 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~----p~v~W~k~~--~~~--~-~~-----------~~~~~~~~-----~~~sL~I~ 351 (902)
.+..+.+.+|++|+|.|.+.+.|. +.|.|+|.+ ..+ + .. ...+.... .+.+|.|.
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (228)
T 3bae_H 6 ESGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKIT 85 (228)
T ss_dssp EECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEEC
T ss_pred CCCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEc
Confidence 345678999999999999998775 889999853 111 0 00 01122221 12589999
Q ss_pred eeeeecCceeEEeecCCC---------------------------CEEEEcCceeeeecCceEEEEEEeecc-CCc-eEE
Q psy12803 352 RINRINMGAYMCLADNVP---------------------------PQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRY 402 (902)
Q Consensus 352 ~Vt~~DsG~YtC~A~N~~---------------------------P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~ 402 (902)
+++.+|+|.|.|.+.|.. |.+........+.+|+.++|.|.+.+. |.| .|.
T Consensus 86 ~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~ 165 (228)
T 3bae_H 86 SVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLT 165 (228)
T ss_dssp SCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEE
T ss_pred CCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEE
Confidence 999999999999987521 122111111234679999999999987 877 999
Q ss_pred EEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 403 WEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 403 W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
|++++..+...... .+. .. +.+...++|.|..+..+| |.|+|.|.|..+.......+
T Consensus 166 W~~~~~~~~~~~~~--~~~-~~-~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~~ 222 (228)
T 3bae_H 166 WNSGSLSSGVHTFP--AVL-QS-DLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKKI 222 (228)
T ss_dssp EGGGTCCTTEEEEE--EEE-ET-TEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred EeeCCcccCceEcC--cee-CC-CcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEEc
Confidence 98877543111111 111 12 455667889999998866 99999999999877655443
No 193
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.57 E-value=2.6e-14 Score=155.03 Aligned_cols=170 Identities=16% Similarity=0.229 Sum_probs=112.2
Q ss_pred eeecCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--cc--cc-------------cCCccceec-----cCCcEE
Q psy12803 294 HIFSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KP--IT-------------LGSWKDSAV-----ASSTLN 349 (902)
Q Consensus 294 ~i~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~--~~-------------~~~~~~~~~-----~~~sL~ 349 (902)
.+..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|... .+ +. ....+.... ...+|+
T Consensus 25 ~v~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 104 (291)
T 2gki_A 25 QLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYME 104 (291)
T ss_dssp EEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEE
T ss_pred EEEcCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEE
Confidence 34456678999999999999998876 57899999642 11 00 001122221 134799
Q ss_pred EEeeeeecCceeEEeecCCC-----------------------------------CEEEEcCceeeeecCceEEEEEEee
Q psy12803 350 FTRINRINMGAYMCLADNVP-----------------------------------PQILIRNRRVGVPIGRTATLECEVE 394 (902)
Q Consensus 350 I~~Vt~~DsG~YtC~A~N~~-----------------------------------P~i~~~p~~~~v~~G~~v~L~C~a~ 394 (902)
|.+++.+|+|.|.|.+.|.. +.+...+..+.+.+|++++|.|.+.
T Consensus 105 I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 184 (291)
T 2gki_A 105 LSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSS 184 (291)
T ss_dssp ECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEES
T ss_pred ECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcC
Confidence 99999999999999997721 1122223456788999999999999
Q ss_pred ccCCc------eEEEEecC--Ce--eeecC--------CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCc
Q psy12803 395 AFPLS------VRYWEFID--GT--LIEHD--------GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 395 g~P~P------~v~W~k~~--~~--l~~~~--------~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G 456 (902)
+.|.+ .+.|+++. .. .+... ..++...... ...+|.|.+++.+|+|.|+|.|.|...
T Consensus 185 ~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~DsG~Y~C~a~~~~~ 259 (291)
T 2gki_A 185 QSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSG-----TDFTLTISSVQAEDLAVYYCKQSYYHM 259 (291)
T ss_dssp SCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecC-----CEEEEEECCCCHHHCEEEEEEEccCCc
Confidence 98876 89999863 21 11111 1222222111 134699999999999999999999654
Q ss_pred eeE-EEEEEEeec
Q psy12803 457 IAK-GSLILFESN 468 (902)
Q Consensus 457 ~~~-~s~~L~V~~ 468 (902)
... ....|.|..
T Consensus 260 ~~fg~gt~l~v~~ 272 (291)
T 2gki_A 260 YTFGSGTKLEIKH 272 (291)
T ss_dssp EEECCCEEEEEEC
T ss_pred eEEcCCEEEEEEe
Confidence 332 223455544
No 194
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.57 E-value=2.5e-14 Score=152.90 Aligned_cols=155 Identities=14% Similarity=0.278 Sum_probs=104.0
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC------CCceEEecCC--Cccc--cc--------CCccceec---cCCcEEEEeeee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP------KPSIIWKTSE--NKPI--TL--------GSWKDSAV---ASSTLNFTRINR 355 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P------~p~v~W~k~~--~~~~--~~--------~~~~~~~~---~~~sL~I~~Vt~ 355 (902)
.+..+.+.+|++|+|.|.+.+.| .+.|.|+|.+ ..+. .. ...+.... ...+|+|.+++.
T Consensus 11 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~ 90 (264)
T 2gjj_A 11 TPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKA 90 (264)
T ss_dssp ECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred cCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCH
Confidence 45668899999999999999987 6899999853 2111 00 01122221 124899999999
Q ss_pred ecCceeEEeecCC---------------CC------------------EE-EEcCceeeeecCceEEEEEEeeccCC--c
Q psy12803 356 INMGAYMCLADNV---------------PP------------------QI-LIRNRRVGVPIGRTATLECEVEAFPL--S 399 (902)
Q Consensus 356 ~DsG~YtC~A~N~---------------~P------------------~i-~~~p~~~~v~~G~~v~L~C~a~g~P~--P 399 (902)
+|+|.|.|.+.|. ++ .+ ...+....+.+|++|+|.|.+.+.|. +
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 170 (264)
T 2gjj_A 91 EDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGYSFTGY 170 (264)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGS
T ss_pred HHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCCccCCe
Confidence 9999999999871 11 11 11222346889999999999998874 7
Q ss_pred eEEEEecC--Ce--eee---cC----------CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeC
Q psy12803 400 VRYWEFID--GT--LIE---HD----------GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNE 454 (902)
Q Consensus 400 ~v~W~k~~--~~--l~~---~~----------~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~ 454 (902)
.+.|+++. .. ++. .. ..++.+...... ...+|.|.+++.+|+|.|+|.|.|.
T Consensus 171 ~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 171 FINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSS---STAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTT---TEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCC---CEEEEEECcCCcccCEEEEEEEecC
Confidence 99999874 11 111 00 112222211111 1356999999999999999999995
No 195
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.57 E-value=4.8e-15 Score=157.17 Aligned_cols=155 Identities=15% Similarity=0.272 Sum_probs=99.3
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCC--Ccc--cc-cC--C----------ccce-----eccCCcEEEEeee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSE--NKP--IT-LG--S----------WKDS-----AVASSTLNFTRIN 354 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~--~~~--~~-~~--~----------~~~~-----~~~~~sL~I~~Vt 354 (902)
.+.++.+.+|++|+|.|.+.+.+.+.+.|+|.. ..+ +. .. . .+.. .....+|.|.+++
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 87 (259)
T 3omz_A 8 RTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLI 87 (259)
T ss_dssp ---CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCC
T ss_pred CCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCC
Confidence 345688999999999999999888999999832 111 00 00 0 0111 1123479999999
Q ss_pred eecCceeEEeecCC----------------------------------CCEEEEcCceeeeecCceEEEEEEeecc-CCc
Q psy12803 355 RINMGAYMCLADNV----------------------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PLS 399 (902)
Q Consensus 355 ~~DsG~YtC~A~N~----------------------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P 399 (902)
.+|+|.|.|.+.|. .+.+...+..+.+.+|++|+|.|.+.+. |.+
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 167 (259)
T 3omz_A 88 ENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSY 167 (259)
T ss_dssp GGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCCSSC
T ss_pred cccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCc
Confidence 99999999999861 2344555666789999999999999875 788
Q ss_pred eEEEEecCC--ee--eec--------CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeC
Q psy12803 400 VRYWEFIDG--TL--IEH--------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNE 454 (902)
Q Consensus 400 ~v~W~k~~~--~l--~~~--------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~ 454 (902)
.+.|++... .+ +.. ...++.+..... ....+|.|.+++.+|+|.|+|.|.+.
T Consensus 168 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 168 YIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKA---AKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp EEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGG---GTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred eEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCc---CCEEEEEECCCChhHCEEEEEEEeCc
Confidence 999998542 11 100 011222221111 11234999999999999999999853
No 196
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.56 E-value=7.9e-15 Score=155.54 Aligned_cols=166 Identities=16% Similarity=0.241 Sum_probs=109.5
Q ss_pred cCCcEEEEcCCeEEEEEecCC--CCCCceEEecCCCc--c--c-c------------cCCccceec-----cCCcEEEEe
Q psy12803 297 SSSPIVVREGDNVRLRCVATG--HPKPSIIWKTSENK--P--I-T------------LGSWKDSAV-----ASSTLNFTR 352 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G--~P~p~v~W~k~~~~--~--~-~------------~~~~~~~~~-----~~~sL~I~~ 352 (902)
.+..+.+.+|++|+|.|.+.+ .+...+.|+|.... . + . ....+.... .+.+|+|.+
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (253)
T 3liz_H 6 ESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSS 85 (253)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECS
T ss_pred cCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 455678999999999999976 33678999985321 1 1 0 001122221 123599999
Q ss_pred eeeecCceeEEeecCC----------------------CCEEEEcCceeeeecCceEEEEEEeec-cCCc-eEEEEecCC
Q psy12803 353 INRINMGAYMCLADNV----------------------PPQILIRNRRVGVPIGRTATLECEVEA-FPLS-VRYWEFIDG 408 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N~----------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P-~v~W~k~~~ 408 (902)
++.+|+|.|.|.+.|. +|.+........+.+|+.++|.|.+.+ .|.+ .+.|++++.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 165 (253)
T 3liz_H 86 LKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (253)
T ss_dssp CCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCe
Confidence 9999999999999762 222222222233557999999999998 6777 899988775
Q ss_pred eeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 409 TLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 409 ~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
.+........ . .. +.+...++|.|..+..+| |.|+|.|.|..+.......|.+.
T Consensus 166 ~~~~~~~~~~--~-~~-g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 166 SSGVHTFPAV--L-QS-DLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp CTTEEECCCE--E-ET-TEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred ecceEeCCcc--c-cC-CeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 3211111111 1 11 456667889999999999 99999999999887777766654
No 197
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.56 E-value=2.5e-14 Score=174.48 Aligned_cols=173 Identities=14% Similarity=0.193 Sum_probs=121.0
Q ss_pred CCcEEEEcC--CeEEEEEecCCCCCCceEEecC--CCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC------
Q psy12803 298 SSPIVVREG--DNVRLRCVATGHPKPSIIWKTS--ENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN------ 367 (902)
Q Consensus 298 ~~~v~v~eG--e~v~L~C~a~G~P~p~v~W~k~--~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N------ 367 (902)
+..+.+.+| ++++|.|.+.+ |.+.|.|+|+ +..+..... .........|.|.+++.+|+|.|+|.+.+
T Consensus 133 ~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 210 (772)
T 3v2a_R 133 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGN-RISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQ 210 (772)
T ss_dssp EEEEEEESSCCCEEEECCCCSC-SSCCEEEEEETTTEEECCCSS-SCEEETTTEEEEEGGGTTTCSEEEEEEEETTEEEE
T ss_pred ceeEEEecCCCCeEEEEccCCC-CCcEEEEEecCCCccccCCCc-eeecCCCCCeEecCCChhhCeEEEEEEEECCceEE
Confidence 345778899 99999999987 8889999996 544433222 22334556899999999999999999976
Q ss_pred -----------CCCEEEEcC-ceeeeecCceEEEEEEeecc--CCceEEEEecCCeeeecCCceEEEe-ecCCCceeeEe
Q psy12803 368 -----------VPPQILIRN-RRVGVPIGRTATLECEVEAF--PLSVRYWEFIDGTLIEHDGVKYSIS-DVDKGSYQYIM 432 (902)
Q Consensus 368 -----------~~P~i~~~p-~~~~v~~G~~v~L~C~a~g~--P~P~v~W~k~~~~l~~~~~~~~~~~-~~~~~s~~~~s 432 (902)
..+.+...+ ..+.+.+|++++|.|.+.+. |.+.+.|++++..+........... ..........+
T Consensus 211 s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (772)
T 3v2a_R 211 SIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLS 290 (772)
T ss_dssp CCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEE
T ss_pred EEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEE
Confidence 122233333 33678999999999999984 5668999988776533211111000 00012334567
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.+++.+|+|.|+|.|.|..+..+..+.|.|..+|..
T Consensus 291 ~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~ 330 (772)
T 3v2a_R 291 TLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFV 330 (772)
T ss_dssp EEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC-
T ss_pred EEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCee
Confidence 8999999999999999999999999999999999876654
No 198
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.56 E-value=3e-14 Score=152.10 Aligned_cols=155 Identities=19% Similarity=0.312 Sum_probs=103.4
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC-----CCceEEecCCC-c-c--ccc--------CCccceec---cCCcEEEEeeeee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP-----KPSIIWKTSEN-K-P--ITL--------GSWKDSAV---ASSTLNFTRINRI 356 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P-----~p~v~W~k~~~-~-~--~~~--------~~~~~~~~---~~~sL~I~~Vt~~ 356 (902)
.+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.+. . + +.. ...+.... ...+|+|.+++.+
T Consensus 21 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 100 (268)
T 1x9q_A 21 TPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAE 100 (268)
T ss_dssp ECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred eCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChh
Confidence 35567889999999999999877 58999998642 1 1 100 01122221 2237999999999
Q ss_pred cCceeEEeecCC---------------C-----C------------------EEEEcCceeeeecCceEEEEEEeeccCC
Q psy12803 357 NMGAYMCLADNV---------------P-----P------------------QILIRNRRVGVPIGRTATLECEVEAFPL 398 (902)
Q Consensus 357 DsG~YtC~A~N~---------------~-----P------------------~i~~~p~~~~v~~G~~v~L~C~a~g~P~ 398 (902)
|+|.|.|.+.|. . | .+...+....+.+|++++|.|.+.+.|.
T Consensus 101 DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~ 180 (268)
T 1x9q_A 101 DLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTF 180 (268)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCG
T ss_pred HCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCccc
Confidence 999999999871 0 0 0112233567889999999999998864
Q ss_pred --ceEEEEecC--Cee--ee---------------cCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeC
Q psy12803 399 --SVRYWEFID--GTL--IE---------------HDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNE 454 (902)
Q Consensus 399 --P~v~W~k~~--~~l--~~---------------~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~ 454 (902)
+.+.|++.. ..+ +. ....++.+..... ....+|.|.+++.+|+|.|+|.|.|.
T Consensus 181 ~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 181 GHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDS---KSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp GGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGG---GTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCC---CCEEEEEECCCCHHHCEEEEEEEccC
Confidence 789998853 221 10 0112222221110 01356999999999999999999985
No 199
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.56 E-value=1.4e-14 Score=155.09 Aligned_cols=164 Identities=14% Similarity=0.191 Sum_probs=109.1
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--cccc---c------------CCccceec-----cCCcEEEE
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KPIT---L------------GSWKDSAV-----ASSTLNFT 351 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~~~---~------------~~~~~~~~-----~~~sL~I~ 351 (902)
..+..+.+.+|++|+|.|.+.+.+ .+.|.|+|... .+.. . ...+.... .+.+|+|.
T Consensus 11 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 90 (261)
T 2xqy_G 11 QQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLS 90 (261)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEc
Confidence 345567899999999999999876 68899998642 1110 0 01122221 23489999
Q ss_pred eeeeecCceeEEeecCC---------------------CCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCC
Q psy12803 352 RINRINMGAYMCLADNV---------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDG 408 (902)
Q Consensus 352 ~Vt~~DsG~YtC~A~N~---------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~ 408 (902)
+|+.+|+|.|.|.+.|. +|.+........+.+|+.++|.|.+.+. |.+ .|.|++++.
T Consensus 91 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~ 170 (261)
T 2xqy_G 91 SLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSL 170 (261)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred CCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCC
Confidence 99999999999999872 1222221111234579999999999985 776 999998876
Q ss_pred eeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 409 TLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 409 ~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
.+......... .. +.+...++|.|..+..+| |.|+|.|.|..........+
T Consensus 171 ~~~~~~~~~~~---~~-g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~~~~ 221 (261)
T 2xqy_G 171 SSGVHTFPAVL---QS-DLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKI 221 (261)
T ss_dssp CTTEEECCCEE---ET-TEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred cCceEecCcee---cC-CcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEEEEe
Confidence 53211111111 12 455667889999998888 99999999977655444333
No 200
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.55 E-value=2.7e-15 Score=157.12 Aligned_cols=160 Identities=14% Similarity=0.206 Sum_probs=106.5
Q ss_pred CCcEEEEcCCeEEEEEecCC-CCC-C-ceEEecCCCcccccCCccceecc------CCcEEEEeeeeecCceeEEeecCC
Q psy12803 298 SSPIVVREGDNVRLRCVATG-HPK-P-SIIWKTSENKPITLGSWKDSAVA------SSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G-~P~-p-~v~W~k~~~~~~~~~~~~~~~~~------~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
+..+.+.+|++++|.|.+.+ .|. | .|+|+|++..++........... ..+|.|.+++.+|+|.|+|.|.|.
T Consensus 20 p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~ 99 (231)
T 2w59_A 20 PSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHE 99 (231)
T ss_dssp CCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECT
T ss_pred cChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcC
Confidence 44455679999999999998 474 4 99999977665111111111111 236999999999999999999981
Q ss_pred ------------------CCEEEEcCceeeeecCceEEEEEEeecc-C-CceEEEEecCCeeeecCCceEEEeec-----
Q psy12803 369 ------------------PPQILIRNRRVGVPIGRTATLECEVEAF-P-LSVRYWEFIDGTLIEHDGVKYSISDV----- 423 (902)
Q Consensus 369 ------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P-~P~v~W~k~~~~l~~~~~~~~~~~~~----- 423 (902)
+|.+.+.........+..++|.|.+.++ | .+.|.|++++..+.............
T Consensus 100 ~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~ 179 (231)
T 2w59_A 100 ELPLPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTAN 179 (231)
T ss_dssp TCSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSC
T ss_pred CCCCceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCccccc
Confidence 2222221111111235679999999986 4 36899999877664322111101111
Q ss_pred ---CC-CceeeEeEEEEeccCCCCCeEEEEEEEeCCce
Q psy12803 424 ---DK-GSYQYIMQLNISNVNISDFDTYRCISKNEVDI 457 (902)
Q Consensus 424 ---~~-~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~ 457 (902)
.+ +.+...+.|.|.....+|.|.|+|+|.|....
T Consensus 180 ~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 180 GAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp C---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred ccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 34 66777889999999999999999999998754
No 201
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.55 E-value=2.8e-14 Score=149.46 Aligned_cols=159 Identities=18% Similarity=0.240 Sum_probs=106.6
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCC--C-----------cccccCC---ccceec----cCCcEEEEeeeee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSE--N-----------KPITLGS---WKDSAV----ASSTLNFTRINRI 356 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~--~-----------~~~~~~~---~~~~~~----~~~sL~I~~Vt~~ 356 (902)
.+..+.+.+|++|+|.| ..+.+.+.|.|+|.. . ....... .+.... .+.+|.|.+++.+
T Consensus 8 ~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~ 86 (245)
T 4ei6_B 8 IPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALE 86 (245)
T ss_dssp ECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGG
T ss_pred CCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHh
Confidence 45668899999999999 667788999999821 1 1000110 122222 1238999999999
Q ss_pred cCceeEEeecC------------------------CCCEEEE-cCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCe
Q psy12803 357 NMGAYMCLADN------------------------VPPQILI-RNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGT 409 (902)
Q Consensus 357 DsG~YtC~A~N------------------------~~P~i~~-~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~ 409 (902)
|+|.|.|.+.+ .+|.+.. .+....+.+|+.++|.|.+.+. |.+ .+.|++++..
T Consensus 87 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~ 166 (245)
T 4ei6_B 87 DSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 166 (245)
T ss_dssp GCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred HCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEE
Confidence 99999999983 0222221 2222334568999999999984 545 8999987665
Q ss_pred eeecCCceEEEee------cCCCceeeEeEEEEeccCCCC-CeEEEEEEEeCCcee
Q psy12803 410 LIEHDGVKYSISD------VDKGSYQYIMQLNISNVNISD-FDTYRCISKNEVDIA 458 (902)
Q Consensus 410 l~~~~~~~~~~~~------~~~~s~~~~stL~I~~V~~~D-sG~YtC~A~N~~G~~ 458 (902)
+.. ........ ..++.+...+.|.|.....+| .|.|+|.|.|.....
T Consensus 167 l~~--~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~~ 220 (245)
T 4ei6_B 167 VHS--GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp ECT--TEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred CCC--CcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCCC
Confidence 532 11111100 135567777889999998888 999999999976543
No 202
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.55 E-value=3.9e-14 Score=146.71 Aligned_cols=151 Identities=13% Similarity=0.170 Sum_probs=106.2
Q ss_pred EEEEcCCeEEEEEecCCCCCC--ceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC-----------
Q psy12803 301 IVVREGDNVRLRCVATGHPKP--SIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN----------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p--~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N----------- 367 (902)
+.|.+|++++|.|.+ +.|.| .|.|++.+..+ . ..........|.|.+|+.+|+|.|.|.|.|
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~-~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~l 91 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---G-AVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQL 91 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---C-CEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---C-cEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEE
Confidence 689999999999999 88888 99999965443 1 111223346899999999999999999998
Q ss_pred ---CCCEEEE-cCceeeeecCceEEEEEEeecc-CC----ceEEEEecCCeeeecCC-c-eEE-----EeecCCCceeeE
Q psy12803 368 ---VPPQILI-RNRRVGVPIGRTATLECEVEAF-PL----SVRYWEFIDGTLIEHDG-V-KYS-----ISDVDKGSYQYI 431 (902)
Q Consensus 368 ---~~P~i~~-~p~~~~v~~G~~v~L~C~a~g~-P~----P~v~W~k~~~~l~~~~~-~-~~~-----~~~~~~~s~~~~ 431 (902)
.+|.... .+ ..+..|+.+ |+|.+.+. |. ++|.|++++..+..... . ... ........+..+
T Consensus 92 tV~~~P~~~~i~~--~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vt 168 (210)
T 1gsm_A 92 LVYAFPNQLTVSP--AALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVT 168 (210)
T ss_dssp EEEBCCSEEEEES--SSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEE
T ss_pred EEEecCCCcEEcc--ceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEE
Confidence 2232222 22 145578888 99999985 74 58999998877632111 0 110 011233467778
Q ss_pred eEEEEeccCCCCCeEEEEEEEeCCceeE
Q psy12803 432 MQLNISNVNISDFDTYRCISKNEVDIAK 459 (902)
Q Consensus 432 stL~I~~V~~~DsG~YtC~A~N~~G~~~ 459 (902)
++|.+......|.+.|+|.|.+.+-...
T Consensus 169 s~~~~~~~~~D~~~~~tC~a~~~L~~~~ 196 (210)
T 1gsm_A 169 ERWRLPPLGTPVPPALYCQATMRLPGLE 196 (210)
T ss_dssp EEEECCCCCSSCCSEEEEEEEEEETTEE
T ss_pred EEEeecCCcccCCceEEEEEEeeCCCCc
Confidence 8899887777777899999999875443
No 203
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.55 E-value=2.3e-14 Score=147.89 Aligned_cols=160 Identities=17% Similarity=0.249 Sum_probs=103.5
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--ccc--c-c-----------CCccceec-----cCCcEEEEee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KPI--T-L-----------GSWKDSAV-----ASSTLNFTRI 353 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~~--~-~-----------~~~~~~~~-----~~~sL~I~~V 353 (902)
.+..+.+.+|++|+|.|.+.+.+ .+.|.|+|.+. .+. . . ...+.... .+.+|.|.++
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (215)
T 1c5d_H 6 ESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSL 85 (215)
T ss_dssp EECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSC
T ss_pred cCCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCC
Confidence 35567899999999999999864 57899998641 110 0 0 01122221 1238999999
Q ss_pred eeecCceeEEeecCC---------------------CCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCee
Q psy12803 354 NRINMGAYMCLADNV---------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGTL 410 (902)
Q Consensus 354 t~~DsG~YtC~A~N~---------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~l 410 (902)
+.+|+|.|.|.+.|. +|.+...+....+.+|+.++|.|.+.+. |.| .|.|++++..+
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 165 (215)
T 1c5d_H 86 QTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSS 165 (215)
T ss_dssp CGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCC
T ss_pred CcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccC
Confidence 999999999999872 1122211111224579999999999987 888 99998887543
Q ss_pred eecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEE
Q psy12803 411 IEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLI 463 (902)
Q Consensus 411 ~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~ 463 (902)
........ . .. +.+...++|. ....+| |.|+|.|.|..+.......
T Consensus 166 ~~~~~~~~--~-~~-g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~~~~~~~ 211 (215)
T 1c5d_H 166 DVHTFPAV--L-QS-GLYTLTSSVT--SSTWPS-QTVTCNVAHPASSTKVDKK 211 (215)
T ss_dssp SCCBCCCE--E-ET-TEEEEEEEEE--ESSTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred ceEecCcc--c-CC-CCEEEEEEEe--cccCCC-CeEEEEEEeCCCCccEEEe
Confidence 21111111 1 11 4444455566 444456 9999999999987654443
No 204
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.54 E-value=1.4e-14 Score=151.92 Aligned_cols=161 Identities=18% Similarity=0.275 Sum_probs=107.4
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCC--ccc------------ccCCccceec----cCCcEEEEeeeeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN--KPI------------TLGSWKDSAV----ASSTLNFTRINRINM 358 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~--~~~------------~~~~~~~~~~----~~~sL~I~~Vt~~Ds 358 (902)
.+..+.+.+|++|+|.|.+.+.+.+.|.|+|... .+. .....+.... .+.+|.|.+++.+|+
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~ 86 (245)
T 3nfj_J 7 WPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDS 86 (245)
T ss_dssp ECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGC
T ss_pred CCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhC
Confidence 4556889999999999999999999999998321 100 0001111111 234799999999999
Q ss_pred ceeEEeecC------------C--------------CCEEEE-cCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCe
Q psy12803 359 GAYMCLADN------------V--------------PPQILI-RNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGT 409 (902)
Q Consensus 359 G~YtC~A~N------------~--------------~P~i~~-~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~ 409 (902)
|.|+|.+.| . +|.+.. .+....+.+|+.++|.|.+.+. |.+ .+.|++++..
T Consensus 87 G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~ 166 (245)
T 3nfj_J 87 GFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKE 166 (245)
T ss_dssp EEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred EEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEE
Confidence 999999976 0 122211 1111123348999999999985 444 7899987766
Q ss_pred eeecCCceEEEe------ecCCCceeeEeEEEEeccCCCC-CeEEEEEEEeCCceeE
Q psy12803 410 LIEHDGVKYSIS------DVDKGSYQYIMQLNISNVNISD-FDTYRCISKNEVDIAK 459 (902)
Q Consensus 410 l~~~~~~~~~~~------~~~~~s~~~~stL~I~~V~~~D-sG~YtC~A~N~~G~~~ 459 (902)
+.. ....... ....+.+...+.|.|.....+| .|.|+|.|.|......
T Consensus 167 l~~--~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 167 VHS--GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp ECT--TEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred CCC--CcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 532 1111100 1145667777889999998888 6699999999865543
No 205
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.54 E-value=5.1e-15 Score=158.59 Aligned_cols=185 Identities=14% Similarity=0.192 Sum_probs=112.2
Q ss_pred CcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec-c---CCcEEEEeeeeecCceeEEeecCCC-----
Q psy12803 299 SPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV-A---SSTLNFTRINRINMGAYMCLADNVP----- 369 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~-~---~~sL~I~~Vt~~DsG~YtC~A~N~~----- 369 (902)
.++++.+|++++|.|.+.+. |+|+|++..+.. +.... . .++|.|.+++.+|+|.|+|.|.|..
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~----~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 79 (289)
T 3mjg_X 8 PELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQ----EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETD 79 (289)
T ss_dssp SEEECCTTCCEEEEEEESSC----CEEEBTTBCCSE----EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------C
T ss_pred CeEEEeCCCcEEEEEeccce----EEEECCCCCccc----ceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcC
Confidence 45778999999999999984 999998766521 11111 1 2589999999999999999999811
Q ss_pred --CEEEE--c-Cc--------e---eeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeE
Q psy12803 370 --PQILI--R-NR--------R---VGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQ 433 (902)
Q Consensus 370 --P~i~~--~-p~--------~---~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~st 433 (902)
..+.+ . +. . +.+.+|+++.|.|.+. .|.|.+.|++.+...... ..+ .... .
T Consensus 80 ~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~--~~~---~~~~-~------ 146 (289)
T 3mjg_X 80 ERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALP--VPY---DHQR-G------ 146 (289)
T ss_dssp CCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCC--CCE---ETTT-E------
T ss_pred cEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccc--eee---cCCc-C------
Confidence 11111 1 10 1 5588999999999998 788899998765222111 000 0111 0
Q ss_pred EEEeccCCCCCeEEEEEEEeCCceeE-EEEEEEeecCCCCCCCCCCcceEEEEeCCCCCCccccCCCCcccCCCCC
Q psy12803 434 LNISNVNISDFDTYRCISKNEVDIAK-GSLILFESNAKTPVPTEKEQEEVTVYNRAPKPEGQDDLCPPQVLCPPCS 508 (902)
Q Consensus 434 L~I~~V~~~DsG~YtC~A~N~~G~~~-~s~~L~V~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~C~~~~v~~~cp 508 (902)
+. ..+|+|.|+|.|.|..+... ..+.|.|....++.............+....+.|....-+.+.+.|...
T Consensus 147 ~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~ 218 (289)
T 3mjg_X 147 FS----GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYP 218 (289)
T ss_dssp EE----ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECT
T ss_pred ee----eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcC
Confidence 11 35799999999999887654 3456666653121111111112233333345555444444445555543
No 206
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.53 E-value=2.5e-14 Score=152.27 Aligned_cols=159 Identities=21% Similarity=0.307 Sum_probs=108.4
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCC--Ccccc-----------cC--C-ccceec----cCCcEEEEeeeee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSE--NKPIT-----------LG--S-WKDSAV----ASSTLNFTRINRI 356 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~--~~~~~-----------~~--~-~~~~~~----~~~sL~I~~Vt~~ 356 (902)
.+..+.+.+|++|+|.|.+. .+.+.|.|+|.. ..+.. .. . .+.... .+.+|.|.+++.+
T Consensus 32 ~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~ 110 (268)
T 3pl6_D 32 TPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERG 110 (268)
T ss_dssp CCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGG
T ss_pred CCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcc
Confidence 45568899999999999987 478899999832 11100 00 0 122222 1457999999999
Q ss_pred cCceeEEeecC----------------C------CCEEEE-cCceeeeecCceEEEEEEeeccCCc--eEEEEecCCeee
Q psy12803 357 NMGAYMCLADN----------------V------PPQILI-RNRRVGVPIGRTATLECEVEAFPLS--VRYWEFIDGTLI 411 (902)
Q Consensus 357 DsG~YtC~A~N----------------~------~P~i~~-~p~~~~v~~G~~v~L~C~a~g~P~P--~v~W~k~~~~l~ 411 (902)
|+|.|+|.+.| . +|.+.. .+....+.+|+.++|.|.+.+.+++ .+.|++++..+.
T Consensus 111 D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~ 190 (268)
T 3pl6_D 111 DSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 190 (268)
T ss_dssp GCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEEC
T ss_pred cCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEECC
Confidence 99999999985 0 233222 2222334568999999999986554 899999877663
Q ss_pred ecCCceEE------EeecCCCceeeEeEEEEeccCCCC-CeEEEEEEEeCCcee
Q psy12803 412 EHDGVKYS------ISDVDKGSYQYIMQLNISNVNISD-FDTYRCISKNEVDIA 458 (902)
Q Consensus 412 ~~~~~~~~------~~~~~~~s~~~~stL~I~~V~~~D-sG~YtC~A~N~~G~~ 458 (902)
. ..... .....++.+...+.|.|.....+| .|.|+|.|.|.....
T Consensus 191 ~--~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~ 242 (268)
T 3pl6_D 191 S--GVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 242 (268)
T ss_dssp T--TEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred C--CeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCC
Confidence 2 11111 011245566777889999998888 999999999986543
No 207
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.53 E-value=2.4e-14 Score=154.31 Aligned_cols=165 Identities=16% Similarity=0.197 Sum_probs=107.2
Q ss_pred CCcEEEEcCCeEEEEEecCCC--CCCceEEecCCCcc-----cccC------------Cccceecc-----CCcEEEEee
Q psy12803 298 SSPIVVREGDNVRLRCVATGH--PKPSIIWKTSENKP-----ITLG------------SWKDSAVA-----SSTLNFTRI 353 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~--P~p~v~W~k~~~~~-----~~~~------------~~~~~~~~-----~~sL~I~~V 353 (902)
+..+.+.+|++|+|.|.+.+. +.+.+.|+|..... +... ..+..... ..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 566789999999999999875 66889999853110 0000 01222221 137999999
Q ss_pred eeecCceeEEeecCC--------------------------------------CCEEEEcCceeeeecCceEEEEEEeec
Q psy12803 354 NRINMGAYMCLADNV--------------------------------------PPQILIRNRRVGVPIGRTATLECEVEA 395 (902)
Q Consensus 354 t~~DsG~YtC~A~N~--------------------------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g 395 (902)
+.+|+|.|.|.+.|. ++.+...+. +.+.+|++|+|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~ 165 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNS 165 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecC
Confidence 999999999999763 112222233 67889999999999998
Q ss_pred -cC-CceEEEEecC--Ceeee--c--------CCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCce---e
Q psy12803 396 -FP-LSVRYWEFID--GTLIE--H--------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDI---A 458 (902)
Q Consensus 396 -~P-~P~v~W~k~~--~~l~~--~--------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~---~ 458 (902)
.+ .+.+.|++.. ..+.. . ...++.+.... ...+|.|.+++.+|+|.|+|.|.|..+. .
T Consensus 166 ~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~ 240 (280)
T 3fku_X 166 NNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSG-----NTASLTITGLQPEDEADYYCSTWDSSLSAVVF 240 (280)
T ss_dssp CCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEET-----TEEEEEECSCCGGGCSEEEEEEEETTTTEEEE
T ss_pred CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccC-----CEEEEEECCCCHHHCEEEEEEEecCCCCceEE
Confidence 44 4789998743 11110 0 01223322211 1345999999999999999999997622 1
Q ss_pred EEEEEEEeec
Q psy12803 459 KGSLILFESN 468 (902)
Q Consensus 459 ~~s~~L~V~~ 468 (902)
.....|.|..
T Consensus 241 g~~t~l~V~~ 250 (280)
T 3fku_X 241 GGGTKLTVLG 250 (280)
T ss_dssp BCCCEEEEC-
T ss_pred CCCEEEEECC
Confidence 2334566654
No 208
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.53 E-value=8.1e-15 Score=150.33 Aligned_cols=151 Identities=15% Similarity=0.163 Sum_probs=98.9
Q ss_pred EcCCeEEEEEecCCCC----CCceEEecCCCcccccCCccceeccCCcEEEEe---eeeec---CceeEEeecCC-----
Q psy12803 304 REGDNVRLRCVATGHP----KPSIIWKTSENKPITLGSWKDSAVASSTLNFTR---INRIN---MGAYMCLADNV----- 368 (902)
Q Consensus 304 ~eGe~v~L~C~a~G~P----~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~---Vt~~D---sG~YtC~A~N~----- 368 (902)
.+|++++|.|.+.+.+ .+.|+|+|++..+............++.|.|.. ++.+| +|.|+|.|.|.
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 6899999999999864 349999998755432211112223345666543 33555 99999999981
Q ss_pred -------------CCEEEEcCceeeeecCceEEEEEEeecc-CC-ceEEEEecCCeeeecCCceEEEeecCCCceeeEeE
Q psy12803 369 -------------PPQILIRNRRVGVPIGRTATLECEVEAF-PL-SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQ 433 (902)
Q Consensus 369 -------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~st 433 (902)
+|.+.+.+.......|..++|.|.+.+. |. +.|.|++++..+... .........++.+...+.
T Consensus 96 ~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~--~~~~~~~~~~gt~~~~s~ 173 (207)
T 1l6x_A 96 IEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNY--KTTPPVLDSDGSFFLYSK 173 (207)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCE--EECCCEECTTSCEEEEEE
T ss_pred eEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCc--cccCceECCCCCEEEEEE
Confidence 1222221111111246679999999985 54 389999987665321 111122245567777888
Q ss_pred EEEeccCCCCCeEEEEEEEeCCc
Q psy12803 434 LNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 434 L~I~~V~~~DsG~YtC~A~N~~G 456 (902)
|.|.....+|.|.|+|.|.|...
T Consensus 174 l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 174 LTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp EEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEECHHHcCCCCEEEEEEEcCCc
Confidence 99988877889999999999864
No 209
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.53 E-value=2.2e-14 Score=147.47 Aligned_cols=164 Identities=16% Similarity=0.175 Sum_probs=100.2
Q ss_pred ecCCcEEEEcCCeEEEEEecCC--CCCCceEEecCCCc--cccc--------------CCccceec---cCCcEEEEeee
Q psy12803 296 FSSSPIVVREGDNVRLRCVATG--HPKPSIIWKTSENK--PITL--------------GSWKDSAV---ASSTLNFTRIN 354 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G--~P~p~v~W~k~~~~--~~~~--------------~~~~~~~~---~~~sL~I~~Vt 354 (902)
..+..+.+.+|++|+|.|.+.+ .+.+.+.|+|.... +... ...+.... .+.+|.|.+++
T Consensus 4 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (215)
T 3nl4_H 4 EESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPT 83 (215)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCC
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCC
Confidence 3456688999999999999976 34678999974321 1000 01111111 12259999999
Q ss_pred eecCceeEEeecCC----------------------CCEEEEcCceeeeecCceEEEEEEeeccCCc--eEEEEecCCee
Q psy12803 355 RINMGAYMCLADNV----------------------PPQILIRNRRVGVPIGRTATLECEVEAFPLS--VRYWEFIDGTL 410 (902)
Q Consensus 355 ~~DsG~YtC~A~N~----------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P--~v~W~k~~~~l 410 (902)
.+|+|.|.|.+.|. +|.+...+....+.+|+.++|.|.+.+.+++ .+.|++++..+
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~ 163 (215)
T 3nl4_H 84 TEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTN 163 (215)
T ss_dssp GGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred cccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEEC
Confidence 99999999999762 2222222222345679999999999986543 57798877533
Q ss_pred eecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12803 411 IEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFE 466 (902)
Q Consensus 411 ~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V 466 (902)
........ ...++.+...+.|.| ...| |.|+|.|.|..+.......|.+
T Consensus 164 ~~~~~~~~---~~~~g~~~~~s~l~v---~~~d-g~ytC~v~~~~~~~~~~~~l~~ 212 (215)
T 3nl4_H 164 GVRTFPSV---RQSSGLYSLSSVVSV---TSSS-QPVTCNVAHPATNTKVDKTVAP 212 (215)
T ss_dssp TEEECCCE---ECTTSCEEEEEEEEE---CC----CCEEEEEEGGGTEEEEEECCS
T ss_pred CeEecCce---ECCCCCEEEEEEEEE---eccC-CEEEEEEEeCCCCcceEEecCC
Confidence 22111111 123344444444554 4557 9999999999988777666643
No 210
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.52 E-value=4.4e-14 Score=128.60 Aligned_cols=95 Identities=18% Similarity=0.293 Sum_probs=81.0
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
||.|...+.++.+.+|+++.|.|.+.|.|.|.|.|++++..+......++.+..... .++|.|.+++.+|+|.|+
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~-----~~~L~I~~~~~~D~G~Y~ 79 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDD-----LTTLIIMDVQKQDGGLYT 79 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSS-----EEEEEESSCCGGGCEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccc-----eEEEEEcCCCccCCEEEE
Confidence 678888888999999999999999999999999999988777655555555544332 346999999999999999
Q ss_pred EEEEeCCceeEEEEEEEeec
Q psy12803 449 CISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 449 C~A~N~~G~~~~s~~L~V~~ 468 (902)
|.|.|..|.++.++.|.|..
T Consensus 80 C~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 80 LSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEEETTEEEEEEEEEEEEC
T ss_pred EEEEECCCEEEEEEEEEEEE
Confidence 99999999999999999864
No 211
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.52 E-value=5e-15 Score=156.38 Aligned_cols=153 Identities=16% Similarity=0.209 Sum_probs=105.2
Q ss_pred EEcCCeEEEEEecCCC---CCC-ceEEecCCCcccccCCccc------eeccCCcEEEEeeeeecCceeEEeecCC----
Q psy12803 303 VREGDNVRLRCVATGH---PKP-SIIWKTSENKPITLGSWKD------SAVASSTLNFTRINRINMGAYMCLADNV---- 368 (902)
Q Consensus 303 v~eGe~v~L~C~a~G~---P~p-~v~W~k~~~~~~~~~~~~~------~~~~~~sL~I~~Vt~~DsG~YtC~A~N~---- 368 (902)
+.+|++++|.|.+.+. |.+ .|+|+|++..+........ ......+|.|.+++.+|+|.|+|.|.|.
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 5789999999999986 766 8999998865432110000 1112347999999999999999999981
Q ss_pred --------------CCEEEEcCceeeeecCceEEEEEEeecc-CC-ceEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 369 --------------PPQILIRNRRVGVPIGRTATLECEVEAF-PL-SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 369 --------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
+|.+.+.+.......|+.++|.|.+.+. |. ..|.|++++..+... .........++.+...+
T Consensus 109 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~--~~~~~~~~~dgt~~~~s 186 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENY--KNTPPTMDTDGSYFLYS 186 (239)
T ss_dssp CEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSE--EECCCEECTTSCEEEEE
T ss_pred CcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCc--eecCceECCCCCEEEEE
Confidence 2333322222222357889999999984 55 389999887655221 11111224556777888
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCce
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVDI 457 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G~ 457 (902)
.|.|.....+|.|.|+|.|.|....
T Consensus 187 ~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 187 KLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp EEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEChhhcCCCCEEEEEEECCCCC
Confidence 8988877777899999999998654
No 212
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.51 E-value=3.7e-14 Score=168.03 Aligned_cols=157 Identities=16% Similarity=0.279 Sum_probs=112.4
Q ss_pred CcEEEEcCCeEEEEEec-CCCCCCceEEecCCCccccc----------CCccceeccCCcEEEEeeeeecCceeEEeecC
Q psy12803 299 SPIVVREGDNVRLRCVA-TGHPKPSIIWKTSENKPITL----------GSWKDSAVASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a-~G~P~p~v~W~k~~~~~~~~----------~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
..+.+.+|++|+|.|.+ .+.|.+.|+|+|++..+... ...+.....+++|.|.+++.+|+|.|+|.+.|
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEEC
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEc
Confidence 34788999999999999 78899999999986532111 01233445567999999999999999999998
Q ss_pred ------------------CCCEEEEcCceeeeecCce-EEEEEEeec-cCCceEEEEecCCeeeecCCceEE---Eee-c
Q psy12803 368 ------------------VPPQILIRNRRVGVPIGRT-ATLECEVEA-FPLSVRYWEFIDGTLIEHDGVKYS---ISD-V 423 (902)
Q Consensus 368 ------------------~~P~i~~~p~~~~v~~G~~-v~L~C~a~g-~P~P~v~W~k~~~~l~~~~~~~~~---~~~-~ 423 (902)
..|.+.. ....+.++.. +.|.|.+.+ +|.|.|.|++++..+......... ... .
T Consensus 454 ~~~~~~~~~~~l~V~~~~~~p~i~~--~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~ 531 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPGKPEIVD--SASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHP 531 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCCCCEEES--CCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECT
T ss_pred CCCceeEEEEEEEEEcCCCCCEEEc--CCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcC
Confidence 1122221 1223455555 467999998 599999999988766543332211 111 2
Q ss_pred CCCceeeEeEEEEeccC-CCCCeEEEEEEEeCCce
Q psy12803 424 DKGSYQYIMQLNISNVN-ISDFDTYRCISKNEVDI 457 (902)
Q Consensus 424 ~~~s~~~~stL~I~~V~-~~DsG~YtC~A~N~~G~ 457 (902)
..+.|...++|.|..++ ..+.|.|+|.|+|.+..
T Consensus 532 ~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 532 ETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp TTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred CCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 56778889999999998 45588999999998753
No 213
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.51 E-value=4.8e-14 Score=151.58 Aligned_cols=162 Identities=18% Similarity=0.275 Sum_probs=109.0
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCC--cc--c-----------cc--CCccceec----cCCcEEEEeee
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN--KP--I-----------TL--GSWKDSAV----ASSTLNFTRIN 354 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~--~~--~-----------~~--~~~~~~~~----~~~sL~I~~Vt 354 (902)
..+..+.+.+|++|+|.|.+.+.+.+.|.|+|.+. .+ + .. ...+.... .+.+|.|.+++
T Consensus 29 ~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 108 (279)
T 2wbj_D 29 QHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAH 108 (279)
T ss_dssp EECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCC
T ss_pred eCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCC
Confidence 34667889999999999999988889999998642 11 0 00 01122221 12379999999
Q ss_pred eecCceeEEeecCC--------------------------CCEEEEc-CceeeeecCceEEEEEEeecc-CC-ceEEEEe
Q psy12803 355 RINMGAYMCLADNV--------------------------PPQILIR-NRRVGVPIGRTATLECEVEAF-PL-SVRYWEF 405 (902)
Q Consensus 355 ~~DsG~YtC~A~N~--------------------------~P~i~~~-p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k 405 (902)
.+|+|.|+|.+.|. +|.+... +....+.+|+.++|.|.+.+. |. +.|.|++
T Consensus 109 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k 188 (279)
T 2wbj_D 109 PEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 188 (279)
T ss_dssp GGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEE
T ss_pred ccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEE
Confidence 99999999999761 1222111 111123368999999999987 54 7999999
Q ss_pred cCCeeeecCCceEE------EeecCCCceeeEeEEEEeccCCCC-CeEEEEEEEeCCceeE
Q psy12803 406 IDGTLIEHDGVKYS------ISDVDKGSYQYIMQLNISNVNISD-FDTYRCISKNEVDIAK 459 (902)
Q Consensus 406 ~~~~l~~~~~~~~~------~~~~~~~s~~~~stL~I~~V~~~D-sG~YtC~A~N~~G~~~ 459 (902)
++..+.. ..... +....++.+...+.|.|.....+| .|.|+|.|.|......
T Consensus 189 ~g~~l~~--~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~~ 247 (279)
T 2wbj_D 189 NGKEVHS--GVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 247 (279)
T ss_dssp TTEECCT--TEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCTT
T ss_pred CCEECCC--CcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCCC
Confidence 7765532 11111 011245667778889999888765 6789999999876543
No 214
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.51 E-value=1.9e-14 Score=164.40 Aligned_cols=165 Identities=16% Similarity=0.257 Sum_probs=112.5
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--cc--c-cc------------CCccceec-----cCCcEEEE
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KP--I-TL------------GSWKDSAV-----ASSTLNFT 351 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~--~-~~------------~~~~~~~~-----~~~sL~I~ 351 (902)
..+..+.+.+|++|+|.|.+.+.+ .+.|.|+|++. .+ + .. ...+.... ...+|.|.
T Consensus 4 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (434)
T 1igy_B 4 QESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLS 83 (434)
T ss_dssp ECCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEEC
T ss_pred ECCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEEC
Confidence 345567899999999999999864 67899998642 21 1 00 01122222 13489999
Q ss_pred eeeeecCceeEEeecCC------------------CCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCeee
Q psy12803 352 RINRINMGAYMCLADNV------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGTLI 411 (902)
Q Consensus 352 ~Vt~~DsG~YtC~A~N~------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~l~ 411 (902)
+++.+|+|.|+|.|.|. +|.+........+.+|+.++|.|.+.+. |.| .|.|++++..+.
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~ 163 (434)
T 1igy_B 84 SLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSG 163 (434)
T ss_dssp SBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSS
T ss_pred CCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCC
Confidence 99999999999999871 2333322222335689999999999987 777 999988775421
Q ss_pred ecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12803 412 EHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILF 465 (902)
Q Consensus 412 ~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~ 465 (902)
....... ...+.+...+.|.|.++..+| |.|+|.|.|..+.......|.
T Consensus 164 ~~~~~~~----~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~ 212 (434)
T 1igy_B 164 VHTFPAV----LQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIV 212 (434)
T ss_dssp EEECCCE----ECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECC
T ss_pred eEecCce----ecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeecc
Confidence 1100000 112445556789999999999 999999999999865554443
No 215
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.51 E-value=2.2e-14 Score=153.12 Aligned_cols=159 Identities=16% Similarity=0.308 Sum_probs=107.4
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCc--cc---ccCC----------c-ccee----ccCCcEEEEeeeee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENK--PI---TLGS----------W-KDSA----VASSTLNFTRINRI 356 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~--~~---~~~~----------~-~~~~----~~~~sL~I~~Vt~~ 356 (902)
.+..+.+.+|++|+|.|.+.+ +.+.|.|+|.... +. .... . +... ..+.+|.|.+++.+
T Consensus 33 ~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~ 111 (270)
T 3qib_D 33 TPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAG 111 (270)
T ss_dssp ECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGG
T ss_pred CCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHh
Confidence 455688999999999999876 7789999983211 10 0000 0 1111 12448999999999
Q ss_pred cCceeEEeecC------------------C------CCEEEE-cCceeeeecCceEEEEEEeec-cCCc-eEEEEecCCe
Q psy12803 357 NMGAYMCLADN------------------V------PPQILI-RNRRVGVPIGRTATLECEVEA-FPLS-VRYWEFIDGT 409 (902)
Q Consensus 357 DsG~YtC~A~N------------------~------~P~i~~-~p~~~~v~~G~~v~L~C~a~g-~P~P-~v~W~k~~~~ 409 (902)
|+|.|.|.+.+ . +|.+.. .+....+.+|+.++|.|.+.+ .|.+ .+.|++++..
T Consensus 112 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~ 191 (270)
T 3qib_D 112 DSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 191 (270)
T ss_dssp GCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred HCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEE
Confidence 99999999984 0 232222 122223445999999999998 6766 8999987765
Q ss_pred eeecCCceEE------EeecCCCceeeEeEEEEeccCCCC-CeEEEEEEEeCCcee
Q psy12803 410 LIEHDGVKYS------ISDVDKGSYQYIMQLNISNVNISD-FDTYRCISKNEVDIA 458 (902)
Q Consensus 410 l~~~~~~~~~------~~~~~~~s~~~~stL~I~~V~~~D-sG~YtC~A~N~~G~~ 458 (902)
+.. ..... .....++.+...+.|.|.....+| .|.|+|.|.|.....
T Consensus 192 l~~--~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~~ 245 (270)
T 3qib_D 192 VHS--GVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 245 (270)
T ss_dssp ECT--TEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBCT
T ss_pred CCC--CcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCCC
Confidence 532 11111 011245566777889999998888 999999999986544
No 216
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} PDB: 1ygv_A 3hqv_A 3hr2_A
Probab=99.51 E-value=1.1e-13 Score=172.13 Aligned_cols=23 Identities=43% Similarity=0.690 Sum_probs=9.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC
Q psy12803 110 CPPGLQGPIGQKGEIGAKGEMGV 132 (902)
Q Consensus 110 c~~g~~G~~G~~G~~G~~G~~G~ 132 (902)
+++|++|++|.+|.+|.+|.+|.
T Consensus 17 g~~g~~G~~G~pG~~G~pG~~G~ 39 (1054)
T 1y0f_A 17 GPMGPSGPRGLPGPPGAPGPQGF 39 (1054)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCC
Confidence 33444444444444444443333
No 217
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.50 E-value=4.3e-14 Score=161.78 Aligned_cols=164 Identities=15% Similarity=0.230 Sum_probs=110.9
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCC--Cccc---cc------------CCccceec-----cCCcEEEEe
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSE--NKPI---TL------------GSWKDSAV-----ASSTLNFTR 352 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~--~~~~---~~------------~~~~~~~~-----~~~sL~I~~ 352 (902)
.+..+.+.+|++|+|.|.+.+.+ .+.|.|+|++ ..+. .. ...+.... .+.+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (444)
T 1igt_B 6 ESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSR 85 (444)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECS
T ss_pred cCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECC
Confidence 44567899999999999998864 6789999864 2110 00 01122222 134899999
Q ss_pred eeeecCceeEEeecCC---------------------CCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCe
Q psy12803 353 INRINMGAYMCLADNV---------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGT 409 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N~---------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~ 409 (902)
++.+|+|.|+|.|.|. +|.+........+.+|+.++|.|.+.+. |.| .|.|++++..
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 165 (444)
T 1igt_B 86 LKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 165 (444)
T ss_dssp CCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCC
Confidence 9999999999999872 1222221111224689999999999985 777 9999888764
Q ss_pred eeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12803 410 LIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILF 465 (902)
Q Consensus 410 l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~ 465 (902)
+......... . .+.+...+.|.|.++..+| |.|+|.|.|..+.......+.
T Consensus 166 ~~~~~~~~~~--~--~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~ 216 (444)
T 1igt_B 166 SGVHTFPAVL--Q--SDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIE 216 (444)
T ss_dssp TTEEECCCEE--E--TTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECC
T ss_pred CCeEecCccc--c--CCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEec
Confidence 2111111111 1 1445556789999999999 999999999999875554443
No 218
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.50 E-value=1e-14 Score=167.03 Aligned_cols=152 Identities=17% Similarity=0.199 Sum_probs=104.9
Q ss_pred EEcCCeEEEEEecCCCC----CCceEEecCCCcccccCCcccee------ccCCcEEEEeeeeecCceeEEeecC-----
Q psy12803 303 VREGDNVRLRCVATGHP----KPSIIWKTSENKPITLGSWKDSA------VASSTLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 303 v~eGe~v~L~C~a~G~P----~p~v~W~k~~~~~~~~~~~~~~~------~~~~sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
+.+|++++|.|.+.|.+ .+.|+|+|++..+.......... ...++|.|.+++.+|+|.|+|.|.|
T Consensus 252 ~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 252 LMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPA 331 (444)
T ss_dssp HCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSS
T ss_pred eecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCC
Confidence 57899999999999873 46899999876543222111111 1234799999999999999999999
Q ss_pred -------------CCCEEEEcCceeeeecCceEEEEEEeec-cCCc-eEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 368 -------------VPPQILIRNRRVGVPIGRTATLECEVEA-FPLS-VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 368 -------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
.+|.+...+.......+..++|.|.+.+ .|.+ .|.|++++..+.. ..........++.+...+
T Consensus 332 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~--~~~~~~~~~~~g~~~~~s 409 (444)
T 1igt_B 332 PIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELN--YKNTEPVLDSDGSYFMYS 409 (444)
T ss_dssp CEEEEEECCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEECSS--EEECCCEECTTSCEEEEE
T ss_pred ceEEEEeccCCCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEEECCEEccc--cccccceeCCCCCEEEEE
Confidence 1233332222111123445999999998 4666 8999998776521 111111224556677788
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCc
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G 456 (902)
.|.|.....+|.|.|+|.|.|..-
T Consensus 410 ~l~i~~~~~~d~g~YtC~a~n~~l 433 (444)
T 1igt_B 410 KLRVEKKNWVERNSYSCSVVHEGL 433 (444)
T ss_dssp EEEEEHHHHHTCCCEEEEEECTTS
T ss_pred EEEEChHHhcCCCeEEEEEECCCc
Confidence 899998888899999999999753
No 219
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.50 E-value=3.7e-14 Score=151.57 Aligned_cols=166 Identities=17% Similarity=0.260 Sum_probs=97.6
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--cc--c-cc------------CCccceec-----cCCcEEEE
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KP--I-TL------------GSWKDSAV-----ASSTLNFT 351 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~--~-~~------------~~~~~~~~-----~~~sL~I~ 351 (902)
..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|... .+ + .. ...+.... ...+|.|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (257)
T 3bn9_D 5 VQSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMS 84 (257)
T ss_dssp EEECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEE
T ss_pred EccCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEEC
Confidence 345567899999999999999865 67899998642 11 1 00 01122221 12479999
Q ss_pred eeeeecCceeEEeecCCC-----------C--------EEEEc------Cc------eeeeecCceEEEEEEeecc-CCc
Q psy12803 352 RINRINMGAYMCLADNVP-----------P--------QILIR------NR------RVGVPIGRTATLECEVEAF-PLS 399 (902)
Q Consensus 352 ~Vt~~DsG~YtC~A~N~~-----------P--------~i~~~------p~------~~~v~~G~~v~L~C~a~g~-P~P 399 (902)
+++.+|+|.|.|.+.|.. . .+.+. |. ...+.+|+.++|.|.+.+. |.|
T Consensus 85 ~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~p 164 (257)
T 3bn9_D 85 SLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 164 (257)
T ss_dssp SCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSC
T ss_pred CCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCC
Confidence 999999999999998732 1 12221 11 1124578899999999986 877
Q ss_pred -eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12803 400 -VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILF 465 (902)
Q Consensus 400 -~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~ 465 (902)
.|.|++++..+....... ....++.+...++|.|.++..+| |.|+|.|.|..........+.
T Consensus 165 i~v~W~k~g~~~~~~~~~~---~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~~~~~i~ 227 (257)
T 3bn9_D 165 VTVSWNSGALTSGVHTFPA---VLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 227 (257)
T ss_dssp CEEEETTTTCCSSCEECCC---EECTTSCEEEEEECCCC--------CEEEEEEEGGGTEEEEEEEC
T ss_pred cEEEEeeCCCcCCcEecCC---eEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcCEEEEEc
Confidence 999988776531111111 11344556677889999998888 999999999766555444443
No 220
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.50 E-value=5.1e-14 Score=129.92 Aligned_cols=96 Identities=24% Similarity=0.245 Sum_probs=79.9
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+.++.+.+|+++.|.|.+.|.|.|.|.|++++..+... .++.+..... ..+|.|.+++.+|+|.|
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~--~~~~~~~~~~-----~~~L~I~~v~~~D~G~Y 84 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS--ERLSFPADGA-----EHGLLLTAALPTDAGVY 84 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEECCEETT-----EEEEEESSCCGGGCEEE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccce--eeEEEeecCc-----eEEEEEecCChhhCEEE
Confidence 4789999999999999999999999999999999999988776443 3344333221 34699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p 470 (902)
+|+|.|.+|..+.++.|.|.++|
T Consensus 85 ~C~a~N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 85 VCRARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEEEEETTEEEEEEEEEEEEC--
T ss_pred EEEEEECCCEEEEEEEEEEEcCC
Confidence 99999999999999999998654
No 221
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.50 E-value=1.1e-14 Score=166.27 Aligned_cols=153 Identities=16% Similarity=0.163 Sum_probs=108.4
Q ss_pred EEcCCeEEEEEecCCCC----CCceEEecCCCcccccCCccc------eeccCCcEEEEeeeeecCceeEEeecC-----
Q psy12803 303 VREGDNVRLRCVATGHP----KPSIIWKTSENKPITLGSWKD------SAVASSTLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 303 v~eGe~v~L~C~a~G~P----~p~v~W~k~~~~~~~~~~~~~------~~~~~~sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
+.+|++++|.|.+.+.+ .+.|+|+|++..+........ .....++|.|.+++.+|+|.|+|.|.|
T Consensus 242 v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 321 (434)
T 1igy_B 242 LLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPA 321 (434)
T ss_dssp HSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSS
T ss_pred cccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCC
Confidence 78899999999999973 458999998866532211111 111235799999999999999999998
Q ss_pred -------------CCCEEEEcCceeeeecCceEEEEEEeecc-CC-ceEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 368 -------------VPPQILIRNRRVGVPIGRTATLECEVEAF-PL-SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 368 -------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
.+|.+...+......+|+.++|.|.+.+. |. +.|.|++++..+.. ..........++.+...+
T Consensus 322 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~--~~~~~~~~~~~g~~~~~s 399 (434)
T 1igy_B 322 PIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPEN--YKNTQPIMDTDGSYFVYS 399 (434)
T ss_dssp CCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSC--CEECCCCCCSSSCEEEEE
T ss_pred ceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCC--ceeccceeCCCCcEEEEE
Confidence 13333333322223467789999999985 43 48999998876622 211112224556677788
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCce
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVDI 457 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G~ 457 (902)
.|.|.....+|+|.|+|.|.|....
T Consensus 400 ~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 400 KLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp EEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred EEEECchhccCCCEEEEEEEcCCCC
Confidence 8999999889999999999998643
No 222
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.49 E-value=1.5e-14 Score=158.50 Aligned_cols=156 Identities=17% Similarity=0.234 Sum_probs=104.0
Q ss_pred CeEEEEEecCCC-C-CCceEEecCCCcccccCCccceeccC------CcEEEEeeeeecCceeEEeecCC----------
Q psy12803 307 DNVRLRCVATGH-P-KPSIIWKTSENKPITLGSWKDSAVAS------STLNFTRINRINMGAYMCLADNV---------- 368 (902)
Q Consensus 307 e~v~L~C~a~G~-P-~p~v~W~k~~~~~~~~~~~~~~~~~~------~sL~I~~Vt~~DsG~YtC~A~N~---------- 368 (902)
++++|.|.+.+. | .+.|+|+|++..+............+ +.|.|.++..+|+|.|+|+|.|.
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 699999999985 4 57999999876543221110011112 25777777778999999999981
Q ss_pred -------CCEE-EEcCceeeeecCceEEEEEEeecc-CCc---eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEE
Q psy12803 369 -------PPQI-LIRNRRVGVPIGRTATLECEVEAF-PLS---VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 369 -------~P~i-~~~p~~~~v~~G~~v~L~C~a~g~-P~P---~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I 436 (902)
.|.+ ...+..+.+.+|++++|.|.+.+. |.+ .|.|+++++..+.... .... ...++.+...++|.|
T Consensus 105 ~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~-~~~~-~~~~g~~~~~~~L~I 182 (323)
T 2wqr_A 105 CADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHST-RKEE-KQRNGTLTVTSTLPV 182 (323)
T ss_dssp CCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCC-CEEE-ECTTSCEEEEEEEEC
T ss_pred CCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCccccccc-CCCc-cCCCCCEEEEEEEEE
Confidence 1222 333444557789999999999986 566 8999997655433221 1111 122333445668999
Q ss_pred eccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 437 SNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
.+++.+|+|.|+|.|.|..+.....+.|
T Consensus 183 ~~~~~~D~G~Y~C~a~n~~~~~~~~~~v 210 (323)
T 2wqr_A 183 GTRDWIEGETYQCRVTHPHLPRALMRST 210 (323)
T ss_dssp CHHHHHTTCCEEEEEECTTSSSCEEEEE
T ss_pred CHHHccCCCCEEEEEECCCCCCCeeeEE
Confidence 9999999999999999987544333333
No 223
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.49 E-value=9.1e-14 Score=159.80 Aligned_cols=166 Identities=17% Similarity=0.238 Sum_probs=112.5
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--cc--c-cc------------CCccceec-----cCCcEEEEe
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KP--I-TL------------GSWKDSAV-----ASSTLNFTR 352 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~--~-~~------------~~~~~~~~-----~~~sL~I~~ 352 (902)
.+..+.+.+|++|+|.|.+.+.+ .+.|.|+|... .+ + .. ...+.... ...+|.|.+
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (457)
T 1hzh_H 6 QSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRS 85 (457)
T ss_dssp ECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred cCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECC
Confidence 45568899999999999999876 77899998531 11 1 00 01122221 123799999
Q ss_pred eeeecCceeEEeecCC------------------------------CCEEEEcCceeeeecCceEEEEEEeecc-CC-ce
Q psy12803 353 INRINMGAYMCLADNV------------------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PL-SV 400 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N~------------------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~-P~ 400 (902)
++.+|+|.|+|.|.|. +|.+...+....+.+|+.++|.|.+.+. |. +.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 165 (457)
T 1hzh_H 86 LRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 165 (457)
T ss_dssp CCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCE
T ss_pred CCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeE
Confidence 9999999999999762 1222221222235689999999999987 65 79
Q ss_pred EEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12803 401 RYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFE 466 (902)
Q Consensus 401 v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V 466 (902)
|.|++++..+... .........+.+...+.|.|.++..+| |.|+|.|.|..+.......|.+
T Consensus 166 v~W~k~~~~~~~~---~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~ 227 (457)
T 1hzh_H 166 VSWNSGALTSGVH---TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEP 227 (457)
T ss_dssp EEETTTTBCTTEE---EEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEeCCEeccce---EcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecc
Confidence 9998877543111 111111233445566789999999999 9999999998887665554443
No 224
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.49 E-value=1.1e-13 Score=145.45 Aligned_cols=165 Identities=18% Similarity=0.295 Sum_probs=109.4
Q ss_pred cCCcEEEEcCCeEEEEEecCCC--CCCceEEecCCC--cc--cc-c------------CCccceec-----cCCcEEEEe
Q psy12803 297 SSSPIVVREGDNVRLRCVATGH--PKPSIIWKTSEN--KP--IT-L------------GSWKDSAV-----ASSTLNFTR 352 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~--P~p~v~W~k~~~--~~--~~-~------------~~~~~~~~-----~~~sL~I~~ 352 (902)
.+..+.+.+|++|+|.|.+.+. +.+.+.|+|... .+ +. . ...+.... .+.+|.|.+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (242)
T 1hxm_B 7 PQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHN 86 (242)
T ss_dssp CCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECS
T ss_pred CCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECC
Confidence 3556889999999999999875 678999998542 11 10 0 11122221 234799999
Q ss_pred eeeecCceeEEeecCCC-------------CEEEEc---------C-------ceeeeecCceEEEEEEeecc-CC-ceE
Q psy12803 353 INRINMGAYMCLADNVP-------------PQILIR---------N-------RRVGVPIGRTATLECEVEAF-PL-SVR 401 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N~~-------------P~i~~~---------p-------~~~~v~~G~~v~L~C~a~g~-P~-P~v 401 (902)
++.+|+|.|.|.+.+.. ..+.+. + ....+.+|+.++|.|.+.+. |. +.|
T Consensus 87 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~~~v 166 (242)
T 1hxm_B 87 VEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKI 166 (242)
T ss_dssp CCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEEE
T ss_pred CCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCCeEE
Confidence 99999999999997621 011111 1 11123358999999999987 64 799
Q ss_pred EEEecCC-eeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12803 402 YWEFIDG-TLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFE 466 (902)
Q Consensus 402 ~W~k~~~-~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V 466 (902)
.|++++. .+....... .. ...+.+...++|.|..+.. | |.|+|.|.|..+....+..|.+
T Consensus 167 ~W~~~~~~~l~~~~~~~--~~-~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 167 HWEEKKSNTILGSQEGN--TM-KTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EEEESSSCCCCCCEECC--CE-ECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred EEEcCCCEeecCccccc--ee-cCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 9999886 442211001 11 1334566678899988875 5 9999999999887654555544
No 225
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.48 E-value=8.4e-14 Score=146.40 Aligned_cols=168 Identities=17% Similarity=0.232 Sum_probs=111.0
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC----CCceEEecCCCc--c--c-ccC-----------------Cccceec-----c
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP----KPSIIWKTSENK--P--I-TLG-----------------SWKDSAV-----A 344 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P----~p~v~W~k~~~~--~--~-~~~-----------------~~~~~~~-----~ 344 (902)
..+..+.+.+|++|+|.|.+.+.+ ...+.|+|.... + + ... ..+.... .
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 84 (239)
T 3tv3_H 5 QESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKN 84 (239)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGT
T ss_pred ecCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCC
Confidence 345567899999999999998755 348999984321 1 1 000 0111111 1
Q ss_pred CCcEEEEeeeeecCceeEEeecC-------------------------------CCCEEEEcCceeeeecCceEEEEEEe
Q psy12803 345 SSTLNFTRINRINMGAYMCLADN-------------------------------VPPQILIRNRRVGVPIGRTATLECEV 393 (902)
Q Consensus 345 ~~sL~I~~Vt~~DsG~YtC~A~N-------------------------------~~P~i~~~p~~~~v~~G~~v~L~C~a 393 (902)
..+|.|.+++.+|+|.|.|.+.+ .+|.+...+....+..|+.++|.|.+
T Consensus 85 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~ 164 (239)
T 3tv3_H 85 LVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 164 (239)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEE
T ss_pred EEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEE
Confidence 23599999999999999999853 12333322223335579999999999
Q ss_pred ecc-CCc-eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 394 EAF-PLS-VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 394 ~g~-P~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
.+. |.+ .+.|++++..+....... ....++.+...+.|.|......| |.|+|.|.|..+.......|.+.
T Consensus 165 ~~~~p~~~~v~W~~~g~~~~~~~~~~---~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~~ 236 (239)
T 3tv3_H 165 KDYFPEPVTVSWNSGALTSGVHTFPA---VLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 236 (239)
T ss_dssp EEEBSSCCEEEEGGGTBCTTEEECCC---EECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred eeEeCCCeEEEEEECCccCceEecCc---eECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEeccc
Confidence 884 544 488988765321111111 12345667778899999999999 99999999998877776666553
No 226
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.47 E-value=6.2e-14 Score=146.95 Aligned_cols=157 Identities=19% Similarity=0.251 Sum_probs=103.5
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCc--c--cc-----------cCCccceec----cCCcEEEEeeeeec
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENK--P--IT-----------LGSWKDSAV----ASSTLNFTRINRIN 357 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~--~--~~-----------~~~~~~~~~----~~~sL~I~~Vt~~D 357 (902)
.+..+.+.+|++|+|.|.+.. +.+.+.|+|.+.. + +. ....+.... .+.+|.|.+++.+|
T Consensus 5 ~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D 83 (238)
T 1bec_A 5 SPRNKVAVTGGKVTLSCQQTN-NHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQ 83 (238)
T ss_dssp ECSEEEEETTCCEEEEEEESS-CCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGG
T ss_pred CCCeeEEeCCCcEEEEEEeCC-CCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCccc
Confidence 456788999999999999964 6789999986421 1 00 001122221 22489999999999
Q ss_pred CceeEEeecCC-------------------------CCEEEE-cCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCe
Q psy12803 358 MGAYMCLADNV-------------------------PPQILI-RNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGT 409 (902)
Q Consensus 358 sG~YtC~A~N~-------------------------~P~i~~-~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~ 409 (902)
+|.|.|.+.|. +|.+.. .+....+.+|+.++|.|.+.+. |.+ .|.|++++..
T Consensus 84 ~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~ 163 (238)
T 1bec_A 84 TSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKE 163 (238)
T ss_dssp CEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEE
T ss_pred CEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEE
Confidence 99999999763 122221 1122234468999999999986 654 9999987766
Q ss_pred eeecCCceEE--EeecCCCceeeEeEEEEeccCCCC-CeEEEEEEEeCCc
Q psy12803 410 LIEHDGVKYS--ISDVDKGSYQYIMQLNISNVNISD-FDTYRCISKNEVD 456 (902)
Q Consensus 410 l~~~~~~~~~--~~~~~~~s~~~~stL~I~~V~~~D-sG~YtC~A~N~~G 456 (902)
+.. ..... .....++.+...+.|.|.....+| .|.|+|.|.|...
T Consensus 164 ~~~--~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 164 VHS--GVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp ECT--TEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred CCC--ceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 532 11111 111234556666778887766655 5789999999754
No 227
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.47 E-value=1.1e-13 Score=144.31 Aligned_cols=167 Identities=16% Similarity=0.218 Sum_probs=106.2
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCce--EEecCCCc----cc-c---cC-----------Cccceec-----cCCcE
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSI--IWKTSENK----PI-T---LG-----------SWKDSAV-----ASSTL 348 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v--~W~k~~~~----~~-~---~~-----------~~~~~~~-----~~~sL 348 (902)
.+..+.+.+|++|+|.|.+.+.+ ...+ .|+|.... .+ . .. ..+.... .+.+|
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 85 (232)
T 3qhz_H 6 ESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVL 85 (232)
T ss_dssp EECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEE
T ss_pred cCCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEE
Confidence 34457799999999999997632 2455 99984321 11 0 00 0112111 11269
Q ss_pred EEEeeeeecCceeEEeecC--------------------------CCCEEEEcCceeeeecCceEEEEEEeeccCC--ce
Q psy12803 349 NFTRINRINMGAYMCLADN--------------------------VPPQILIRNRRVGVPIGRTATLECEVEAFPL--SV 400 (902)
Q Consensus 349 ~I~~Vt~~DsG~YtC~A~N--------------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~--P~ 400 (902)
.|.+++.+|+|.|.|.+.+ .+|.+........+..|+.++|.|.+.+.++ ..
T Consensus 86 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~ 165 (232)
T 3qhz_H 86 TMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 165 (232)
T ss_dssp EECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCE
T ss_pred EECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeE
Confidence 9999999999999999973 1233332222234567999999999998643 35
Q ss_pred EEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 401 RYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 401 v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
+.|++++..+....... ....++.+...+.|.|..+...| |.|+|.|.|..+.......|.+.
T Consensus 166 v~W~~~g~~~~~~~~~~---~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~~ 228 (232)
T 3qhz_H 166 VSWNSGALTSGVHTFPA---VLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 228 (232)
T ss_dssp EEEGGGTBCTTEEECCC---EECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred EEEEECCEecceeeccc---eeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCCC
Confidence 78988764321111111 12334566777889999999999 99999999999888777776654
No 228
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.47 E-value=1.5e-13 Score=145.47 Aligned_cols=158 Identities=19% Similarity=0.283 Sum_probs=104.0
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcc----c-ccCC----------c-cceeccCCc--EEEEeeeeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKP----I-TLGS----------W-KDSAVASST--LNFTRINRINM 358 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~----~-~~~~----------~-~~~~~~~~s--L~I~~Vt~~Ds 358 (902)
.+..+.+.+|++|+|.|.+.+.+.+.+.|+|..... + .... . +.....+.. |.|.+++.+|+
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~Ds 86 (253)
T 3to4_D 7 NPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQG 86 (253)
T ss_dssp ECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSC
T ss_pred CCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhC
Confidence 355688999999999999999889999999832110 0 0000 0 222222222 99999999999
Q ss_pred ceeEEeecCC--------------------------CCEEEEc-CceeeeecCceEEEEEEeec-cCCc-eEEEEecCCe
Q psy12803 359 GAYMCLADNV--------------------------PPQILIR-NRRVGVPIGRTATLECEVEA-FPLS-VRYWEFIDGT 409 (902)
Q Consensus 359 G~YtC~A~N~--------------------------~P~i~~~-p~~~~v~~G~~v~L~C~a~g-~P~P-~v~W~k~~~~ 409 (902)
|.|.|.+.+. +|.+... +....+.+|+.++|.|.+.+ .|.+ .|.|++++..
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~ 166 (253)
T 3to4_D 87 RTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 166 (253)
T ss_dssp EEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred eEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEE
Confidence 9999999731 1111110 11111224689999999998 5766 8999987765
Q ss_pred eeecCCceEEEe------ecCCCceeeEeEEEEeccCCCC-CeEEEEEEEeCCc
Q psy12803 410 LIEHDGVKYSIS------DVDKGSYQYIMQLNISNVNISD-FDTYRCISKNEVD 456 (902)
Q Consensus 410 l~~~~~~~~~~~------~~~~~s~~~~stL~I~~V~~~D-sG~YtC~A~N~~G 456 (902)
+.. ....... ...++.+...+.|.|.....+| .|.|+|.|.|..-
T Consensus 167 l~~--~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l 218 (253)
T 3to4_D 167 VHS--GVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (253)
T ss_dssp ECT--TEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred CCC--ceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCC
Confidence 532 1111100 0145667777889999998888 7799999999753
No 229
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.46 E-value=4.6e-14 Score=144.98 Aligned_cols=167 Identities=15% Similarity=0.135 Sum_probs=109.1
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec---cCCcEEEEeeeeecCceeEEeecCCC---
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV---ASSTLNFTRINRINMGAYMCLADNVP--- 369 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~---~~~sL~I~~Vt~~DsG~YtC~A~N~~--- 369 (902)
..+.++.+.+|+++.|.|.+.+.|.|.|.|+|++..+......+.... ..++|.|.+++.+|+|.|+|.|.|..
T Consensus 23 ~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 102 (215)
T 3mtr_A 23 QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQE 102 (215)
T ss_dssp ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEE
T ss_pred cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCce
Confidence 345568899999999999999999999999998766543322222222 24689999999999999999999910
Q ss_pred ---CEEEE--c---Ccee-eeecCceEEEEEEee----ccCCc--eEEEEecCCeeeecCCceEEEeecCCCceeeEeEE
Q psy12803 370 ---PQILI--R---NRRV-GVPIGRTATLECEVE----AFPLS--VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQL 434 (902)
Q Consensus 370 ---P~i~~--~---p~~~-~v~~G~~v~L~C~a~----g~P~P--~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL 434 (902)
..+.+ . +... ....+..+.|.|... +.|.. .+.|.+++..... ........... ...|
T Consensus 103 ~~~~~l~v~~~P~~p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~--~~~~~~~~~~~-----~~~l 175 (215)
T 3mtr_A 103 SLEFILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWH--SKWYDAKEASM-----EGIV 175 (215)
T ss_dssp EEEEEEEECCCCCCCEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCE--EEEEEHHHHHH-----HTEE
T ss_pred EEEEEEEECCCCCCCcceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCccc--ccccccccccc-----cccE
Confidence 01111 0 1111 123467788888742 33443 4778765533110 00001000000 1349
Q ss_pred EEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecC
Q psy12803 435 NISNVNISDFDTYRCISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 435 ~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~ 469 (902)
.|.++...|.|.|+|.|.|.+|....+..+.+..+
T Consensus 176 ~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~ 210 (215)
T 3mtr_A 176 TIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 210 (215)
T ss_dssp EEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECC
T ss_pred EECCCCCCCEEEEEEEEEeCCcccCcccceeeEec
Confidence 99999999999999999999998876666666543
No 230
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.45 E-value=1.5e-13 Score=158.98 Aligned_cols=158 Identities=18% Similarity=0.243 Sum_probs=104.9
Q ss_pred EEcCCeEEEEEecCCC-CC-C-ceEEecCCCcccccCCcccee-cc------CCcEEEEeeeeecCceeEEeecCC----
Q psy12803 303 VREGDNVRLRCVATGH-PK-P-SIIWKTSENKPITLGSWKDSA-VA------SSTLNFTRINRINMGAYMCLADNV---- 368 (902)
Q Consensus 303 v~eGe~v~L~C~a~G~-P~-p-~v~W~k~~~~~~~~~~~~~~~-~~------~~sL~I~~Vt~~DsG~YtC~A~N~---- 368 (902)
+.+|+.++|.|.+.|. |. + .|+|+|++..... ....... .. .+.|.|..+..+|+|.|+|.|.|.
T Consensus 138 ~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~-~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 216 (475)
T 1iga_A 138 TQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTA-RNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 216 (475)
T ss_pred cCCCCeEEEEEEEeeecCCCceEEEEcCCCcccce-EeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCc
Confidence 3689999999999996 65 4 9999997643211 1001011 11 235888888889999999999981
Q ss_pred -----------------------------CCEE-EEcCceeeeecCceEEEEEEeeccCC---ceEEEEecCCeeeecCC
Q psy12803 369 -----------------------------PPQI-LIRNRRVGVPIGRTATLECEVEAFPL---SVRYWEFIDGTLIEHDG 415 (902)
Q Consensus 369 -----------------------------~P~i-~~~p~~~~v~~G~~v~L~C~a~g~P~---P~v~W~k~~~~l~~~~~ 415 (902)
+|.+ ...+....+.+|++++|.|.+.+.++ +.|.| ++..+.....
T Consensus 217 ~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~ 294 (475)
T 1iga_A 217 QDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQ 294 (475)
T ss_pred eeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccc
Confidence 1112 11222233578999999999998754 68999 4443322111
Q ss_pred ceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12803 416 VKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILF 465 (902)
Q Consensus 416 ~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~ 465 (902)
. ......++.+...++|.|.+++.+|+|.|+|.|.|..+.......|.
T Consensus 295 ~--~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~ 342 (475)
T 1iga_A 295 G--PPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLS 342 (475)
T ss_pred c--CceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEee
Confidence 1 11112233445667899999999999999999999999865555554
No 231
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.45 E-value=3.4e-13 Score=140.67 Aligned_cols=169 Identities=16% Similarity=0.271 Sum_probs=110.5
Q ss_pred cCCcEEEEcCCeEEEEEecCC--CCCCceEEecCCCc--c--c-cc------------CCccceeccC-----CcEEEEe
Q psy12803 297 SSSPIVVREGDNVRLRCVATG--HPKPSIIWKTSENK--P--I-TL------------GSWKDSAVAS-----STLNFTR 352 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G--~P~p~v~W~k~~~~--~--~-~~------------~~~~~~~~~~-----~sL~I~~ 352 (902)
.+..+.+.+|++|+|.|.+.+ .....+.|+|.... + + .. ...+.....+ .+|+|.+
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (230)
T 3n9g_H 6 QSGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSS 85 (230)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred ecCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECC
Confidence 445688999999999999875 23567999974321 1 1 00 0112222111 2499999
Q ss_pred eeeecCceeEEeecCC--------------------------CCEEEEcCceeeeecCceEEEEEEeecc-C-CceEEEE
Q psy12803 353 INRINMGAYMCLADNV--------------------------PPQILIRNRRVGVPIGRTATLECEVEAF-P-LSVRYWE 404 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N~--------------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P-~P~v~W~ 404 (902)
++.+|+|.|.|.+.+. +|.+........+.+|+.++|.|.+.+. | .+.+.|
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W- 164 (230)
T 3n9g_H 86 LRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW- 164 (230)
T ss_dssp CCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE-
T ss_pred CChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE-
Confidence 9999999999998642 1222211222234589999999999885 4 346899
Q ss_pred ecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecC
Q psy12803 405 FIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 405 k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~ 469 (902)
++..+.. ...........++.+...++|.|..+..+| |.|+|.|.|..+.......|.|.+.
T Consensus 165 -~~~~~~~-~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~~~ 226 (230)
T 3n9g_H 165 -NSGALTS-GVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPKSC 226 (230)
T ss_dssp -GGGTBCT-TEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCCTT
T ss_pred -CCcccCC-CeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCCCC
Confidence 4433321 100101112345667778899999999999 9999999999888777777776643
No 232
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.44 E-value=4.1e-13 Score=142.07 Aligned_cols=160 Identities=19% Similarity=0.265 Sum_probs=106.5
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCc--c--cc-----------cCCccceec----cCCcEEEEeeeeec
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENK--P--IT-----------LGSWKDSAV----ASSTLNFTRINRIN 357 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~--~--~~-----------~~~~~~~~~----~~~sL~I~~Vt~~D 357 (902)
.+..+.+.+|++|+|.|.+.. +.+.+.|+|.... + +. ....+.... .+.+|.|.+++.+|
T Consensus 9 ~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D 87 (252)
T 1oga_E 9 SPKYLFRKEGQNVTLSCEQNL-NHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNP 87 (252)
T ss_dssp SCSEEEEETTCCEEECCEECS-CCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCC
T ss_pred cCCeEEEcCCCcEEEEEEeCC-CCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhh
Confidence 456688999999999999864 6789999986421 1 10 001122222 23589999999999
Q ss_pred CceeEEeecCC-----------------------CCEEEEc-CceeeeecCceEEEEEEeecc-CC-ceEEEEecCCeee
Q psy12803 358 MGAYMCLADNV-----------------------PPQILIR-NRRVGVPIGRTATLECEVEAF-PL-SVRYWEFIDGTLI 411 (902)
Q Consensus 358 sG~YtC~A~N~-----------------------~P~i~~~-p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k~~~~l~ 411 (902)
+|.|.|.+.|. +|.+... +....+.+|+.++|.|.+.+. |. +.|.|++++..+.
T Consensus 88 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~ 167 (252)
T 1oga_E 88 TAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 167 (252)
T ss_dssp CEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred CEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECC
Confidence 99999998762 1222111 111123368999999999986 75 4999999776553
Q ss_pred ecCCceEE------EeecCCCceeeEeEEEEeccCCC-CCeEEEEEEEeCCceeE
Q psy12803 412 EHDGVKYS------ISDVDKGSYQYIMQLNISNVNIS-DFDTYRCISKNEVDIAK 459 (902)
Q Consensus 412 ~~~~~~~~------~~~~~~~s~~~~stL~I~~V~~~-DsG~YtC~A~N~~G~~~ 459 (902)
. ..... +....++.+...+.|.|...... |.|.|+|.|.|......
T Consensus 168 ~--~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 220 (252)
T 1oga_E 168 S--GVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 220 (252)
T ss_dssp S--SEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred C--CcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCC
Confidence 2 11111 01134566777888999887664 57899999999865443
No 233
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.44 E-value=1.1e-13 Score=153.17 Aligned_cols=153 Identities=15% Similarity=0.180 Sum_probs=102.7
Q ss_pred EEEcCCeEEEEEecCCC-CC-CceEEecCCCcccccCCccc-----eeccCCcEEEEeeeeecCceeEEeecCC------
Q psy12803 302 VVREGDNVRLRCVATGH-PK-PSIIWKTSENKPITLGSWKD-----SAVASSTLNFTRINRINMGAYMCLADNV------ 368 (902)
Q Consensus 302 ~v~eGe~v~L~C~a~G~-P~-p~v~W~k~~~~~~~~~~~~~-----~~~~~~sL~I~~Vt~~DsG~YtC~A~N~------ 368 (902)
.+.+|++++|.|.+.|. |. +.|+|+|++..+........ .....+.|.|.+++.+| |.|+|.|.|.
T Consensus 131 ~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~ 209 (344)
T 1za6_B 131 KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 209 (344)
T ss_dssp TTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEE
T ss_pred cccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 35689999999999986 65 79999998754311100000 01112378999999888 9999999981
Q ss_pred --------------------------------CCEEEEcCceeeeecCceEEEEEEeecc-C-CceEEEEecCCeeeecC
Q psy12803 369 --------------------------------PPQILIRNRRVGVPIGRTATLECEVEAF-P-LSVRYWEFIDGTLIEHD 414 (902)
Q Consensus 369 --------------------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P-~P~v~W~k~~~~l~~~~ 414 (902)
+|.+...+......+|..++|.|.+.|. | .+.|.|++++..+....
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~ 289 (344)
T 1za6_B 210 DKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYK 289 (344)
T ss_dssp EEEECCCCC--------------------CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEE
T ss_pred eEeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcE
Confidence 1222221111112346779999999996 4 35899999887663221
Q ss_pred CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCce
Q psy12803 415 GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDI 457 (902)
Q Consensus 415 ~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~ 457 (902)
........++.+...+.|.|.....+|.|.|+|+|.|....
T Consensus 290 --~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 290 --TTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp --ECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred --ecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 11122245566777888999888888999999999997654
No 234
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.43 E-value=2e-14 Score=148.40 Aligned_cols=157 Identities=16% Similarity=0.207 Sum_probs=104.0
Q ss_pred CCcEEEEcCCeEEEEEecCCCCC---CceEEecCCCcccccCCcc------ceeccCCcEEEEeeeeecCceeEEeecC-
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPK---PSIIWKTSENKPITLGSWK------DSAVASSTLNFTRINRINMGAYMCLADN- 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~---p~v~W~k~~~~~~~~~~~~------~~~~~~~sL~I~~Vt~~DsG~YtC~A~N- 367 (902)
+..+.+.+|++++|.|.+.+.+. +.|.| + +.......... .......+|.|.+++.+|+|.|+|.|.|
T Consensus 11 P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~C~~~~~ 88 (214)
T 1ow0_A 11 PALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYP 88 (214)
T ss_dssp CCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEEEECCS
T ss_pred cChHHhccCCCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeEEEEEecC
Confidence 44566789999999999999654 68999 4 33322110000 0011234788999999999999999998
Q ss_pred --C--------------CCEEEEcC-ceeeeecCceEEEEEEeecc-CC-ceEEEEecCCeeeecCCceEEEeec---CC
Q psy12803 368 --V--------------PPQILIRN-RRVGVPIGRTATLECEVEAF-PL-SVRYWEFIDGTLIEHDGVKYSISDV---DK 425 (902)
Q Consensus 368 --~--------------~P~i~~~p-~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k~~~~l~~~~~~~~~~~~~---~~ 425 (902)
. +|.+.+.+ ....+.+|+.++|.|.+.+. |. +.|.|++++..+............. .+
T Consensus 89 ~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~d 168 (214)
T 1ow0_A 89 ESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGT 168 (214)
T ss_dssp SCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCEECSCSSS
T ss_pred CCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCcccccCCC
Confidence 1 22222211 11224578899999999986 54 4899999876654321111111223 56
Q ss_pred CceeeEeEEEEeccCCCCCeEEEEEEEeCCc
Q psy12803 426 GSYQYIMQLNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 426 ~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G 456 (902)
+.+...+.|.|.....+|.|.|+|.|.|...
T Consensus 169 gt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 169 TTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp CCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred CcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 7778888898887766778999999999764
No 235
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.43 E-value=3.8e-13 Score=151.58 Aligned_cols=152 Identities=15% Similarity=0.173 Sum_probs=108.3
Q ss_pred EEcCCeEEEEEecCCC-CC---CceEEecCCCcccccCCccc------eeccCCcEEEEeeeeecCceeEEeecC-----
Q psy12803 303 VREGDNVRLRCVATGH-PK---PSIIWKTSENKPITLGSWKD------SAVASSTLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 303 v~eGe~v~L~C~a~G~-P~---p~v~W~k~~~~~~~~~~~~~------~~~~~~sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
+.+|++++|.|.+.+. |. ..|+|+|++..+........ .......|.|..++.+|+|.|+|.+.+
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 7889999999999986 33 36999998865432111111 111233799999999999999999988
Q ss_pred -------------CCCEEEEcCceeeeecCceEEEEEEeecc-C-CceEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 368 -------------VPPQILIRNRRVGVPIGRTATLECEVEAF-P-LSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 368 -------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P-~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
.+|.+.+.+....+.+|+.++|.|.+.++ | .+.|+|++++..+.. ..........++.+...+
T Consensus 260 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~--~~~~~~~~~~dgty~~~s 337 (376)
T 2aty_A 260 PIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAEN--YKNTQPIMNTNESYFVYS 337 (376)
T ss_pred ceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCC--eEeCCceECCCCCEEEEE
Confidence 23444444444444468899999999986 3 458999998866532 111122235566788888
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCc
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G 456 (902)
.|.|.....+|.|.|+|+|.|..-
T Consensus 338 ~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 338 KLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred EEEEcHHHhCCCCcEEEEEEeCCC
Confidence 999999888899999999999764
No 236
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.43 E-value=4.7e-13 Score=154.85 Aligned_cols=154 Identities=16% Similarity=0.215 Sum_probs=104.9
Q ss_pred EEEcCCeEEEEEecCCCCC---CceEEecCCCcccccCCcccee------ccCCcEEEEeeeeecCceeEEeecC-----
Q psy12803 302 VVREGDNVRLRCVATGHPK---PSIIWKTSENKPITLGSWKDSA------VASSTLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 302 ~v~eGe~v~L~C~a~G~P~---p~v~W~k~~~~~~~~~~~~~~~------~~~~sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
.+.+|++++|.|.+.+.+. +.|+| + +..+.......... ...+.|.|.+++.+|+|.|+|.|.|
T Consensus 258 ~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~ 335 (475)
T 1iga_A 258 DLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKT 335 (475)
T ss_pred HhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCC
Confidence 3689999999999998643 68999 4 43332211111111 1234799999999999999999998
Q ss_pred ------------CCCEEEEcCc-eeeeecCceEEEEEEeecc-C-CceEEEEecCCeeeecCCceEEEeec---CCCcee
Q psy12803 368 ------------VPPQILIRNR-RVGVPIGRTATLECEVEAF-P-LSVRYWEFIDGTLIEHDGVKYSISDV---DKGSYQ 429 (902)
Q Consensus 368 ------------~~P~i~~~p~-~~~v~~G~~v~L~C~a~g~-P-~P~v~W~k~~~~l~~~~~~~~~~~~~---~~~s~~ 429 (902)
.+|.+.+.+. ...+.+|+++.|.|.+.+. | .+.|.|++++..+............. .++.+.
T Consensus 336 ~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~ 415 (475)
T 1iga_A 336 PLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFA 415 (475)
T ss_pred ceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEE
Confidence 1233322222 1235678999999999986 4 35999999876654321011111222 455677
Q ss_pred eEeEEEEeccCCCCCeEEEEEEEeCCce
Q psy12803 430 YIMQLNISNVNISDFDTYRCISKNEVDI 457 (902)
Q Consensus 430 ~~stL~I~~V~~~DsG~YtC~A~N~~G~ 457 (902)
..+.|.|.....+|.|.|+|.|.|....
T Consensus 416 ~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 416 VTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred EEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 7889999999999999999999998654
No 237
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.41 E-value=5.1e-13 Score=141.64 Aligned_cols=169 Identities=18% Similarity=0.244 Sum_probs=108.8
Q ss_pred eecCCcEEEEcCCeEEEEEecCC--CCCCceEEecCCCc--c--c-c---c---------CCccceec-----cCCcEEE
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATG--HPKPSIIWKTSENK--P--I-T---L---------GSWKDSAV-----ASSTLNF 350 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G--~P~p~v~W~k~~~~--~--~-~---~---------~~~~~~~~-----~~~sL~I 350 (902)
+..+..+.+.+|++|+|.|.+.+ .+...+.|+|.... + + . . ...+.... ...+|+|
T Consensus 3 l~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 82 (248)
T 3u2s_H 3 LVESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQM 82 (248)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred eecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEE
Confidence 34566788999999999999975 34568999974321 1 1 0 0 01122221 1235999
Q ss_pred EeeeeecCceeEEeecC----------------------------------------CCCEEEEcCceeeeecCceEEEE
Q psy12803 351 TRINRINMGAYMCLADN----------------------------------------VPPQILIRNRRVGVPIGRTATLE 390 (902)
Q Consensus 351 ~~Vt~~DsG~YtC~A~N----------------------------------------~~P~i~~~p~~~~v~~G~~v~L~ 390 (902)
.+++.+|+|.|.|.+.+ .+|.+........+..|+.++|.
T Consensus 83 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~ 162 (248)
T 3u2s_H 83 NSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALG 162 (248)
T ss_dssp CSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEE
T ss_pred CCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEE
Confidence 99999999999999862 12333322222334568999999
Q ss_pred EEeecc-C-CceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 391 CEVEAF-P-LSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 391 C~a~g~-P-~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
|.+.+. | ...+.|++++..+...... .....++.+...+.|.|......| |.|+|.|.|..+.......|.+.
T Consensus 163 C~~~~~~P~~~~v~W~~~g~~~~~~~~~---~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~~ 237 (248)
T 3u2s_H 163 CLVKDYFPEPVTVSWNSGALTSGVHTFP---AVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 237 (248)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECC---CEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC-
T ss_pred EEEeeEECCCeEEEEeECCccCceeecC---ceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEccC
Confidence 999874 5 4578998876432111111 112345667778899999999888 99999999998877666666543
No 238
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.40 E-value=2e-13 Score=156.86 Aligned_cols=152 Identities=14% Similarity=0.164 Sum_probs=102.4
Q ss_pred EEcCCeEEEEEecCCCCCC----ceEEecCCCcccccCCccceeccCCcEEEEeee---eec---CceeEEeecC-----
Q psy12803 303 VREGDNVRLRCVATGHPKP----SIIWKTSENKPITLGSWKDSAVASSTLNFTRIN---RIN---MGAYMCLADN----- 367 (902)
Q Consensus 303 v~eGe~v~L~C~a~G~P~p----~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt---~~D---sG~YtC~A~N----- 367 (902)
+.+|++++|.|.+.|.|.+ .|+|+|++..+............++.|.|..+. .+| +|.|+|.|.|
T Consensus 261 ~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~ 340 (457)
T 1hzh_H 261 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 340 (457)
T ss_dssp HCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSS
T ss_pred cccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCC
Confidence 5689999999999997543 899999876543221111223345666666443 555 9999999997
Q ss_pred -------------CCCEEEEcCce-eeeecCceEEEEEEeeccCCc--eEEEEecCCeeeecCCceEEEeecCCCceeeE
Q psy12803 368 -------------VPPQILIRNRR-VGVPIGRTATLECEVEAFPLS--VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYI 431 (902)
Q Consensus 368 -------------~~P~i~~~p~~-~~v~~G~~v~L~C~a~g~P~P--~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~ 431 (902)
.+|.+...+.. ..+..|+ ++|.|.+.+.|++ .|.|++++..+.... ........++.+...
T Consensus 341 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~--~~~~~~~~~g~~~~~ 417 (457)
T 1hzh_H 341 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYK--TTPPVLDSDGSFFLY 417 (457)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEE--ECCCEECTTSCEEEE
T ss_pred cceEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECccee--ecCceeCCCCCEEEE
Confidence 12333332222 2233445 9999999997544 899999876653211 111223455667778
Q ss_pred eEEEEeccCCCCCeEEEEEEEeCCce
Q psy12803 432 MQLNISNVNISDFDTYRCISKNEVDI 457 (902)
Q Consensus 432 stL~I~~V~~~DsG~YtC~A~N~~G~ 457 (902)
+.|.|.....+|+|.|+|.|.|....
T Consensus 418 s~l~i~~~~~~~~g~YtC~a~n~~l~ 443 (457)
T 1hzh_H 418 SKLTVDKSRWQQGNVFSCSVMHEALH 443 (457)
T ss_dssp EEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEEChHHccCCCeEEEEEEECCCC
Confidence 88999988888999999999998643
No 239
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.40 E-value=8.7e-13 Score=137.79 Aligned_cols=157 Identities=17% Similarity=0.277 Sum_probs=103.1
Q ss_pred cCCcEEEEcCCeEEEEEecCCC--CCCceEEecCCC--cc--cc-c-----------CCccceec-----cCCcEEEEee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGH--PKPSIIWKTSEN--KP--IT-L-----------GSWKDSAV-----ASSTLNFTRI 353 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~--P~p~v~W~k~~~--~~--~~-~-----------~~~~~~~~-----~~~sL~I~~V 353 (902)
.+..+.+.+|++|+|.|.+.+. +.+.+.|+|... .+ +. . ...+.... .+.+|.|.++
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (230)
T 1ypz_F 7 PEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSL 86 (230)
T ss_dssp SCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSC
T ss_pred cCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcC
Confidence 3556889999999999999874 567899998542 11 10 0 11222222 1237999999
Q ss_pred eeecCceeEEeecCC---C-------CEEEEc----------Cceee--------eecCceEEEEEEeecc-CC-ceEEE
Q psy12803 354 NRINMGAYMCLADNV---P-------PQILIR----------NRRVG--------VPIGRTATLECEVEAF-PL-SVRYW 403 (902)
Q Consensus 354 t~~DsG~YtC~A~N~---~-------P~i~~~----------p~~~~--------v~~G~~v~L~C~a~g~-P~-P~v~W 403 (902)
+.+|+|.|.|.+.+. . -.+.+. +.... +.+|+.++|.|.+.+. |. +.|.|
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v~W 166 (230)
T 1ypz_F 87 EEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVYW 166 (230)
T ss_dssp CGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEEEE
T ss_pred ChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEEEE
Confidence 999999999999862 1 122221 11111 2247889999999987 75 59999
Q ss_pred Ee-cCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCcee
Q psy12803 404 EF-IDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIA 458 (902)
Q Consensus 404 ~k-~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~ 458 (902)
++ ++..+.... ...+. ..++.+...+.|.|..+.. | |.|+|.|.|.....
T Consensus 167 ~~~~g~~l~~~~--~~~~~-~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~ 217 (230)
T 1ypz_F 167 KEKDGNTILDSQ--EGDTL-KTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKG 217 (230)
T ss_dssp ECTTSSCBCCCE--ECCCE-EETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTT
T ss_pred EccCCeEccccc--cceee-cCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCC
Confidence 98 554442211 10111 2345566678899998886 5 99999999987643
No 240
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.39 E-value=2e-12 Score=115.85 Aligned_cols=94 Identities=17% Similarity=0.153 Sum_probs=76.7
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+.............. .++|.|.+++.+|+|.|+
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~------~~~L~i~~v~~~D~G~Y~ 78 (99)
T 1g1c_A 5 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDN------VCELVIRDVTGEDSASIM 78 (99)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETT------EEEEEECSCCGGGCEEEE
T ss_pred CCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCC------EEEEEECCCCcCCCEEEE
Confidence 57888888889999999999999999999999999998876654332222111111 345999999999999999
Q ss_pred EEEEeCCceeEEEEEEEeec
Q psy12803 449 CISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 449 C~A~N~~G~~~~s~~L~V~~ 468 (902)
|.|.|..|....++.|.|..
T Consensus 79 C~a~N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 79 VKAINIAGETSSHAFLLVQA 98 (99)
T ss_dssp EEEEETTEEEEEEEEEEEEC
T ss_pred EEEEECCCcEEEEEEEEEec
Confidence 99999999999999998864
No 241
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.38 E-value=1.3e-12 Score=138.74 Aligned_cols=170 Identities=18% Similarity=0.299 Sum_probs=107.3
Q ss_pred eecCCcEEEEcCCeEEEEEecCCC--CCCceEEecCCCc--c--cc-------------cCCccceecc-----CCcEEE
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGH--PKPSIIWKTSENK--P--IT-------------LGSWKDSAVA-----SSTLNF 350 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~--P~p~v~W~k~~~~--~--~~-------------~~~~~~~~~~-----~~sL~I 350 (902)
+..+..+.+.+|++|+|.|.+.+. ....+.|+|.... + +. ....+..... +.+|+|
T Consensus 27 v~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 106 (256)
T 3sob_H 27 LVESGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQM 106 (256)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred EEecCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEE
Confidence 334456789999999999998753 3567999974321 1 10 0011222211 124999
Q ss_pred EeeeeecCceeEEeecC-----------------------------CCCEEEEcCceeeeecCceEEEEEEeecc-C-Cc
Q psy12803 351 TRINRINMGAYMCLADN-----------------------------VPPQILIRNRRVGVPIGRTATLECEVEAF-P-LS 399 (902)
Q Consensus 351 ~~Vt~~DsG~YtC~A~N-----------------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P-~P 399 (902)
.+++.+|+|.|.|.+.+ .+|.+........+.+|+.++|.|.+.+. | .+
T Consensus 107 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~ 186 (256)
T 3sob_H 107 NSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 186 (256)
T ss_dssp CSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCC
T ss_pred CCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCe
Confidence 99999999999999863 12233222222235689999999999874 5 34
Q ss_pred eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 400 VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 400 ~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
.+.| ++..+.. ...........++.+...++|.|..+..+| |.|+|.|.|..+....+..|.+.+
T Consensus 187 ~v~W--~~~~~~~-~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~~~ 251 (256)
T 3sob_H 187 TVSW--NSGALTS-GVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKS 251 (256)
T ss_dssp EEEE--GGGTBCT-TEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC-
T ss_pred EEEE--CCcccCC-CeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEecccC
Confidence 7899 4433311 000001112445667778899999999999 999999999988777776665543
No 242
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=2.5e-12 Score=118.95 Aligned_cols=99 Identities=15% Similarity=0.180 Sum_probs=82.0
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+.... ++.+..... .++|.|.+++.+|+|.|
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~--~~~~~~~~~-----~~~L~I~~v~~~D~G~Y 78 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESE--HMKVENSEN-----GSKLTILAARQEHCGCY 78 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSS--SEEEEECSS-----EEEEEETTCCTTTCEEE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCC--CEEEEEcCC-----EEEEEECCCChhcCEEE
Confidence 46888888888999999999999999999999999999887775433 333332211 34699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTPV 473 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~~ 473 (902)
+|.|.|..|..+..+.|.|...+.++
T Consensus 79 ~C~a~N~~g~~~~~~~l~V~~~p~~P 104 (114)
T 2cqv_A 79 TLLVENKLGSRQAQVNLTVVDKPDPP 104 (114)
T ss_dssp EEEEECSSCEEECCEEEEEECSCSCC
T ss_pred EEEEEECCCcEEEEEEEEEECCCCCC
Confidence 99999999999999999998776553
No 243
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.37 E-value=1.4e-12 Score=135.84 Aligned_cols=164 Identities=18% Similarity=0.277 Sum_probs=105.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCC--CCCceEEecCCC--c--ccc---c----------CCccceec-----cCCcEEEEe
Q psy12803 297 SSSPIVVREGDNVRLRCVATGH--PKPSIIWKTSEN--K--PIT---L----------GSWKDSAV-----ASSTLNFTR 352 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~--P~p~v~W~k~~~--~--~~~---~----------~~~~~~~~-----~~~sL~I~~ 352 (902)
.+..+.+.+|++|+|.|.+.+. +...+.|+|... . .+. . ...+.... .+.+|+|.+
T Consensus 6 q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (226)
T 3mlr_H 6 ESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTT 85 (226)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESS
T ss_pred cCCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECC
Confidence 4456889999999999998762 356899998431 1 110 0 01122221 123599999
Q ss_pred eeeecCceeEEeecC---------------------------CCCEEEEcCceeeeecCceEEEEEEeecc-C-CceEEE
Q psy12803 353 INRINMGAYMCLADN---------------------------VPPQILIRNRRVGVPIGRTATLECEVEAF-P-LSVRYW 403 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N---------------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P-~P~v~W 403 (902)
++.+|+|.|.|.+.+ .+|.+...+....+.+|+.+.|.|.+.+. | .+.+.|
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W 165 (226)
T 3mlr_H 86 LQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW 165 (226)
T ss_dssp CCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE
T ss_pred CCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE
Confidence 999999999999842 12333322222234578999999999875 4 457899
Q ss_pred EecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 404 EFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 404 ~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
++..+.. ...........++.+...+.|.|.....+| |.|+|.|.|..+.......|
T Consensus 166 --~~~~~~~-~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~ 222 (226)
T 3mlr_H 166 --NSGALTS-GVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKV 222 (226)
T ss_dssp --GGGTCCT-TEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEEC
T ss_pred --CCccccC-CeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeEEEc
Confidence 3332211 100101112445667778899999999999 99999999998776555444
No 244
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.36 E-value=2e-12 Score=116.16 Aligned_cols=95 Identities=24% Similarity=0.356 Sum_probs=77.0
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+.......+.... .+ .++|.|.+++.+|+|.|+
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~--~~----~~~L~i~~v~~~D~G~Y~ 78 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSE--KG----LHSLIFEVVRASDAGAYA 78 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEET--TT----EEEEEESSCCGGGCEEEE
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcC--CC----eEEEEECCCCcccCEEEE
Confidence 567777778888999999999999999999999999988776544333333221 11 235999999999999999
Q ss_pred EEEEeCCceeEEEEEEEeecC
Q psy12803 449 CISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 449 C~A~N~~G~~~~s~~L~V~~~ 469 (902)
|.|.|..|..+.++.|.|...
T Consensus 79 C~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 79 CVAKNRAGEATFTVQLDVLAK 99 (100)
T ss_dssp EEEEETTEEEEEEEEEEEECC
T ss_pred EEEEcCCCeEEEEEEEEEEec
Confidence 999999999999999998754
No 245
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.36 E-value=5e-12 Score=148.22 Aligned_cols=169 Identities=15% Similarity=0.145 Sum_probs=109.2
Q ss_pred CcEEEEcCCeEEEEEecCCC-C-CCceEEecCCCccccc-CCccceeccC------CcEEEEeeeeecCceeEEeecC--
Q psy12803 299 SPIVVREGDNVRLRCVATGH-P-KPSIIWKTSENKPITL-GSWKDSAVAS------STLNFTRINRINMGAYMCLADN-- 367 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~-P-~p~v~W~k~~~~~~~~-~~~~~~~~~~------~sL~I~~Vt~~DsG~YtC~A~N-- 367 (902)
....+.+|++++|.|.+.+. | ...|+|+|++..+... .........+ +.|.|..+..+|.|.|+|.|.|
T Consensus 305 ~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~ 384 (512)
T 1zvo_C 305 AVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPS 384 (512)
T ss_pred ChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCC
Confidence 33446789999999999985 4 2489999987664311 1111111122 3589999999999999999998
Q ss_pred -CCC--EEEE-------cCceeeee----cCceEE-EEEEeeccCCc--eEEEEecCCeeeecCCceEEEeecCCCc-ee
Q psy12803 368 -VPP--QILI-------RNRRVGVP----IGRTAT-LECEVEAFPLS--VRYWEFIDGTLIEHDGVKYSISDVDKGS-YQ 429 (902)
Q Consensus 368 -~~P--~i~~-------~p~~~~v~----~G~~v~-L~C~a~g~P~P--~v~W~k~~~~l~~~~~~~~~~~~~~~~s-~~ 429 (902)
..+ .+.. .+..+.+. +|+.+. |.|.+.+++++ .|.|++++..+...............+. +.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~ 464 (512)
T 1zvo_C 385 LPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFW 464 (512)
T ss_pred CCCCceeEEeecCCCCCCCCEEEEEccCcCCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEE
Confidence 111 1111 01112222 588899 99999986443 6899998876643211111122233444 67
Q ss_pred eEeEEEEeccCCCCCeEEEEEEEeCCcee--EEEEEEEee
Q psy12803 430 YIMQLNISNVNISDFDTYRCISKNEVDIA--KGSLILFES 467 (902)
Q Consensus 430 ~~stL~I~~V~~~DsG~YtC~A~N~~G~~--~~s~~L~V~ 467 (902)
..+.|.|.....+|.|.|+|+|.|..... .....|.|.
T Consensus 465 ~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~~~~~~~~~v~ 504 (512)
T 1zvo_C 465 AWSVLRVPAPPSPQPATYTCVVSHEDSRTLLNASRSLEVS 504 (512)
T ss_pred EEEEEEECchhcCCCCeEEEEEEecCCCCceEEEEEEEec
Confidence 77889999888889999999999987553 344444443
No 246
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.35 E-value=3.9e-12 Score=114.00 Aligned_cols=95 Identities=17% Similarity=0.188 Sum_probs=77.6
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+... ..++...... ..++|.|.+++.+|+|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~-~~~~~~~~~~-----~~~~L~i~~~~~~D~G~Y 77 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPD-QRRFAEEAEG-----GLCRLRILAAERGDAGFY 77 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCB-TTEEEEECGG-----GEEEEEESSCCGGGCEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCC-CCEEEEECCC-----CEEEEEEccCCcCCCEEE
Confidence 3678888888889999999999999999999999999988766443 2333332221 124699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeec
Q psy12803 448 RCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~ 468 (902)
+|.|.|..|..+.++.|.|.+
T Consensus 78 ~C~a~N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 78 TCKAVNEYGARQCEARLEVRG 98 (99)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEECCCceeEEEEEEEEC
Confidence 999999999999999998864
No 247
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=1.3e-12 Score=119.61 Aligned_cols=99 Identities=21% Similarity=0.359 Sum_probs=82.0
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|++++|.|.+.+.|.|.|.|++++..+.......+... ..+ .++|.|.+++.+|+|.|
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~--~~~----~~~L~i~~v~~~D~G~Y 81 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVR--ENG----VHSLIIEPVTSRDAGIY 81 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEEC--TTS----CEEEEESSCCGGGCSBB
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEe--cCC----eEEEEEeeCCcccCEEE
Confidence 578999999999999999999999999999999999998877654333332222 221 24599999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.|..|..+.++.|.|...+..
T Consensus 82 ~C~a~n~~g~~~~~~~l~V~~~p~~ 106 (110)
T 2dm3_A 82 TCIATNRAGQNSFSLELVVAAKESG 106 (110)
T ss_dssp CEEEECSSCEEEECCEEEEECCCCS
T ss_pred EEEEECCCCEEEEEEEEEEeCCCCC
Confidence 9999999999999999999887654
No 248
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.33 E-value=1.5e-12 Score=139.36 Aligned_cols=166 Identities=17% Similarity=0.283 Sum_probs=103.2
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--cc--c-cc-----------CCccceec-----cCCcEEEEee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KP--I-TL-----------GSWKDSAV-----ASSTLNFTRI 353 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~--~-~~-----------~~~~~~~~-----~~~sL~I~~V 353 (902)
.+..+.+.+|++|+|.|.+.+.. ...|.|+|... .+ + .. ...+.... .+.+|.|.++
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 85 (263)
T 3iu4_H 6 ESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSL 85 (263)
T ss_dssp EECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSC
T ss_pred CCCCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCC
Confidence 34457799999999999997633 56799997432 11 1 00 01122211 1225999999
Q ss_pred eeecCceeEEeecCC--------------------------CCEEEEcCceeeeecCceEEEEEEeecc-CC-ceEEEEe
Q psy12803 354 NRINMGAYMCLADNV--------------------------PPQILIRNRRVGVPIGRTATLECEVEAF-PL-SVRYWEF 405 (902)
Q Consensus 354 t~~DsG~YtC~A~N~--------------------------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k 405 (902)
+.+|+|.|.|.+.+. +|.+........+.+|+.++|.|.+.+. |. +.|.|
T Consensus 86 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W-- 163 (263)
T 3iu4_H 86 QTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW-- 163 (263)
T ss_dssp CGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE--
T ss_pred CHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE--
Confidence 999999999998531 2222221222234578999999999876 43 67999
Q ss_pred cCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEe
Q psy12803 406 IDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFE 466 (902)
Q Consensus 406 ~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V 466 (902)
++..+.. ...........++.+...++|.|..+..+| |.|+|.|.|..+.......|.+
T Consensus 164 ~~~~~~~-~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~ 222 (263)
T 3iu4_H 164 NSGALTS-GVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 222 (263)
T ss_dssp GGGTBCT-TEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECCC
T ss_pred CCcccCC-ceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEcC
Confidence 3332211 000001112445667778899999998889 9999999999887666555543
No 249
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.32 E-value=9.1e-13 Score=141.94 Aligned_cols=177 Identities=17% Similarity=0.264 Sum_probs=108.6
Q ss_pred cccccccccCCCCCCCCcccccCCcccCCceeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcccee-
Q psy12803 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA- 342 (902)
Q Consensus 264 ~c~~kN~scs~~s~~~~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~- 342 (902)
.|.+.|..+.. .....+.+..+|.+..+..+..+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+..........
T Consensus 78 ~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~ 156 (305)
T 2nzi_A 78 QVRATNQGGSV-SGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVT 156 (305)
T ss_dssp EEEEEETTEEE-EEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEEC
T ss_pred EEEEEcCCCCc-cceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEc
Confidence 45555554432 2223444555565544444444567889999999999999999999999999776553322211111
Q ss_pred ccCCcEEEEe-eeeecCceeEEeecCC------CCEEEE--c---Cceeee--ecCceEEEEEEe--------------e
Q psy12803 343 VASSTLNFTR-INRINMGAYMCLADNV------PPQILI--R---NRRVGV--PIGRTATLECEV--------------E 394 (902)
Q Consensus 343 ~~~~sL~I~~-Vt~~DsG~YtC~A~N~------~P~i~~--~---p~~~~v--~~G~~v~L~C~a--------------~ 394 (902)
....+|.|.+ ++.+|+|.|+|.|.|. ...+.+ . +....+ ..+..+.|.|.. .
T Consensus 157 ~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~ 236 (305)
T 2nzi_A 157 RSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVE 236 (305)
T ss_dssp SSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEE
T ss_pred CCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEE
Confidence 1335899999 9999999999999991 000110 0 111111 234455555543 2
Q ss_pred ccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEE
Q psy12803 395 AFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGS 461 (902)
Q Consensus 395 g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s 461 (902)
..+.+...|.+.. ... ...|.|.++...|.|.|+|.|.|.+|....+
T Consensus 237 ~~~~~~~~w~~~~--------------~~~------~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S 283 (305)
T 2nzi_A 237 KCATTAERWLRVG--------------QAR------ETRYTVINLFGKTSYQFRVIAENKFGLSKPS 283 (305)
T ss_dssp EEETTSCCEEEEE--------------EES------SSEEEECSCCSSCEEEEEEEEEETTEECCCC
T ss_pred EecCCCCccEECc--------------ccc------CceEEecCCCCCCeEEEEEEEEeCCcccCCc
Confidence 2222233332211 111 1249999999999999999999999976533
No 250
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.32 E-value=7.9e-13 Score=139.87 Aligned_cols=152 Identities=15% Similarity=0.180 Sum_probs=102.2
Q ss_pred EEcCCeEEEEEecCCC---C-CCceEEecCCCcccccCCccceec------cCCcEEEEeeeeecCceeEEeecC-----
Q psy12803 303 VREGDNVRLRCVATGH---P-KPSIIWKTSENKPITLGSWKDSAV------ASSTLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 303 v~eGe~v~L~C~a~G~---P-~p~v~W~k~~~~~~~~~~~~~~~~------~~~sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
+..|++++|.|.+.+. | ..+|+|+|++..+........... ..+.|.|..+..+|.|.|+|+|.|
T Consensus 36 l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~ 115 (240)
T 4acp_A 36 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 115 (240)
T ss_dssp HSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----
T ss_pred cccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCc
Confidence 4569999999999995 3 347999998766532111011111 123677777777889999999998
Q ss_pred -------------CCCEEEEcCceeeeecCceEEEEEEeecc-CCc-eEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 368 -------------VPPQILIRNRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 368 -------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
.+|.+.+.+......+|+.++|.|.+.++ |.+ .|.|++++..+... .........++++...+
T Consensus 116 ~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~--~~~~~~~~~dgt~~~~s 193 (240)
T 4acp_A 116 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNY--KATPPVLDSDGSFFLYS 193 (240)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSE--EECCCEECTTSCEEEEE
T ss_pred cccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCc--CccCceECCCCCEEEEE
Confidence 12333332222222358899999999984 654 79999987664211 11112224567788888
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCc
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G 456 (902)
.|.|......|.+.|+|.|.+..-
T Consensus 194 ~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 194 KLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp EEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEEEChHHhCCCCEEEEEEEECCC
Confidence 999988877789999999999753
No 251
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.32 E-value=5.5e-12 Score=112.12 Aligned_cols=90 Identities=19% Similarity=0.268 Sum_probs=73.7
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecC--CeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFID--GTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~--~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++ ..+.. ...+... . ..++|.|.+++.+|+|.
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~--~~~~~~~-~------~~~~L~i~~~~~~D~G~ 72 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAP--ELLVDAK-S------STTSIFFPSAKRADSGN 72 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCST--TSEEEEE-T------TEEEEECTTBCGGGCEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCC--cEEEEec-C------CEEEEEECCCChhcCEE
Confidence 688877788889999999999999999999999999988 55422 2222211 1 13569999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEee
Q psy12803 447 YRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 447 YtC~A~N~~G~~~~s~~L~V~ 467 (902)
|+|.|.|..|..+.++.|.|.
T Consensus 73 Y~C~a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 73 YKLKVKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp EEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEcCCCeEEEEEEEEEC
Confidence 999999999999999998873
No 252
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.31 E-value=7.9e-12 Score=112.95 Aligned_cols=94 Identities=23% Similarity=0.318 Sum_probs=77.9
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+.... ++.+..... ..+|.|.+++.+|+|.|+
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~--~~~~~~~~~-----~~~L~i~~~~~~D~G~Y~ 80 (103)
T 3qp3_A 8 APRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESS--KIHYTNTSG-----VLTLEILDCHTDDSGTYR 80 (103)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCS--SEEEEEETT-----EEEEEECSCCGGGCEEEE
T ss_pred CCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCC--CEEEEECCC-----EEEEEEcCCCcccCEEEE
Confidence 5788888888999999999999999999999999999887664433 333332221 346999999999999999
Q ss_pred EEEEeCCceeEEEEEEEeecC
Q psy12803 449 CISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 449 C~A~N~~G~~~~s~~L~V~~~ 469 (902)
|.|.|..|..+.++.|.|...
T Consensus 81 C~a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 81 AVCTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp EEEEETTEEEEEEEEEEEECC
T ss_pred EEEEeCCCcEEEEEEEEEECC
Confidence 999999999999999998754
No 253
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.31 E-value=9.4e-12 Score=115.95 Aligned_cols=100 Identities=20% Similarity=0.285 Sum_probs=81.8
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+.++.+.+|+++.|.|.+.+.|.|.|.|++++..+... ..++.+.....+ .++|.|.+++.+|+|.|
T Consensus 14 ~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~-~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y 88 (116)
T 2kkq_A 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFN-TDRISLYQDNTG----RVTLLIKDVNKKDAGWY 88 (116)
T ss_dssp BCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCC-BTTEEEEECTTC----EEEEEEEEECGGGCEEE
T ss_pred CCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCC-CCeEEEEeCCCC----eEEEEECCCCcccCEEE
Confidence 4688888888999999999999999999999999999988666432 233444333322 24699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.|..|..+.++.|.|..++..
T Consensus 89 ~C~a~N~~G~~~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 89 TVSAVNEAGVTTCNTRLDVTARPNQ 113 (116)
T ss_dssp EEEEEETTEEEEEEEEEEEECCSCC
T ss_pred EEEEEcCCCeEEEEEEEEEeCCCCC
Confidence 9999999999999999999876654
No 254
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.31 E-value=8.8e-12 Score=111.42 Aligned_cols=95 Identities=18% Similarity=0.293 Sum_probs=77.6
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+......++.+..... .++|.|.+++.+|+|.|+
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~ 79 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDD-----LTTLIIMDVQKQDGGLYT 79 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSS-----EEEEEESSCCGGGCEEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCC-----EEEEEEeecCcccCEEEE
Confidence 567777788889999999999999999999999999987766433344444433221 356999999999999999
Q ss_pred EEEEeCCceeEEEEEEEeec
Q psy12803 449 CISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 449 C~A~N~~G~~~~s~~L~V~~ 468 (902)
|.|.|..|..+.++.|.|..
T Consensus 80 C~a~n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 80 LSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEEETTEEEEEEEEEEEEC
T ss_pred EEEEeCCCcEEEEEEEEEEe
Confidence 99999999999999998863
No 255
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=7e-12 Score=112.77 Aligned_cols=93 Identities=28% Similarity=0.397 Sum_probs=77.7
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+... ..++.+. ..+ +|.|.+++.+|+|.|
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~-~~~~~~~--~~~------~L~i~~v~~~d~G~Y 77 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGR-DPRATIQ--EQG------TLQIKNLRISDTGTY 77 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSS-CSSCEEC--TTC------CEEEESCCTTTCCEE
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCC-CCCEEEc--CCC------EEEEccCCcccCEEE
Confidence 4788888888899999999999999999999999999988776532 2233222 222 399999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecC
Q psy12803 448 RCISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~ 469 (902)
+|.|.|..|..+.++.|.|.++
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 78 TCVATSSSGETSWSAVLDVTES 99 (100)
T ss_dssp EEEEECSSCCCBCCEEEEEESC
T ss_pred EEEEEcCCCCEEEEEEEEEecC
Confidence 9999999999999999998864
No 256
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.29 E-value=2e-11 Score=149.13 Aligned_cols=159 Identities=18% Similarity=0.228 Sum_probs=117.9
Q ss_pred CCeEEEEEecCCCCCCceEEecCCCcccccCCcccee----ccCCcEEEEeeeeecCceeEEeecC-------CCCEEEE
Q psy12803 306 GDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA----VASSTLNFTRINRINMGAYMCLADN-------VPPQILI 374 (902)
Q Consensus 306 Ge~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~----~~~~sL~I~~Vt~~DsG~YtC~A~N-------~~P~i~~ 374 (902)
..++.|.|.+.|.|.|.+.|.|++............+ ..+.+|.|..+...|.|.|.|.... .+|.|.
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~- 169 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL- 169 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEEC-
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccc-
Confidence 4589999999999999999999887653222111111 2233688999999999999986554 567776
Q ss_pred cCceeeeecCceEEEEEEeeccCCceEE-EE--ecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEE
Q psy12803 375 RNRRVGVPIGRTATLECEVEAFPLSVRY-WE--FIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCIS 451 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~P~P~v~-W~--k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A 451 (902)
.+.++.+.+|++++|.|.+.|.|.|.+. |+ +++..+.... .... . .....++|.|.+++.+|+|.|+|.|
T Consensus 170 ~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~---~~~~-~---~~~~~~~l~I~~~~~~d~g~Y~c~A 242 (731)
T 2v5y_A 170 RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKE---IKVT-S---SRRFIASFNVVNTTKRDAGKYRCMI 242 (731)
T ss_dssp CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEE---EEEC-C---SSEEEEEEEECSCCTTTCEEEEEEE
T ss_pred cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccc---eEEe-c---cccceEEEEEcccccccCeEEEEEE
Confidence 5667889999999999999999999988 87 4554443211 1111 1 1123467999999999999999999
Q ss_pred EeCCce-eEEEEEEEeecCCCC
Q psy12803 452 KNEVDI-AKGSLILFESNAKTP 472 (902)
Q Consensus 452 ~N~~G~-~~~s~~L~V~~~p~~ 472 (902)
.|..|. .+..+.|.|..+|.+
T Consensus 243 ~n~~G~~~s~~~~l~V~~~P~~ 264 (731)
T 2v5y_A 243 RTEGGVGISNYAELVVKEPPVP 264 (731)
T ss_dssp EETTEEEECCCEEEEEECCCCB
T ss_pred ECCCCCcceeeEEEEEecCCCC
Confidence 999998 677788888876543
No 257
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.27 E-value=1.3e-11 Score=120.73 Aligned_cols=99 Identities=24% Similarity=0.306 Sum_probs=79.9
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+... .++.+.....+ .++|.|.+++.+|+|.|
T Consensus 40 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~--~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y 113 (154)
T 1fhg_A 40 VKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKES--RHFQIDYDEEG----NCSLTISEVCGDDDAKY 113 (154)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCS--SSEEEEECTTC----EEEEEESSCCGGGCEEE
T ss_pred CCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCC--CcEEEEECCCC----eEEEEECCCChhcCEEE
Confidence 6788988888899999999999999999999999999988766433 33333322221 24699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.|..|....++.|.|..++..
T Consensus 114 ~C~a~N~~G~~~~~~~l~V~~~p~~ 138 (154)
T 1fhg_A 114 TCKAVNSLGEATCTAELLVETMGKE 138 (154)
T ss_dssp EEEEEETTEEEEEEEEEEEECC---
T ss_pred EEEEEECCCeEEEEEEEEEeCcCcC
Confidence 9999999999999999999876654
No 258
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.26 E-value=2.2e-11 Score=108.88 Aligned_cols=93 Identities=20% Similarity=0.239 Sum_probs=76.4
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+... .++.+..... .++|.|.+++.+|+|.|+
T Consensus 6 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~--~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~ 78 (99)
T 3puc_A 6 KPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQG--GKYKLSEDKG-----GFFLEIHKTDTSDSGLYT 78 (99)
T ss_dssp EEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSS--SSEEEEEETT-----EEEEEECSCCGGGCEEEE
T ss_pred CCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCC--CCEEEEEeCC-----EEEEEECCCCcccCEEEE
Confidence 578888888899999999999999999999999999987666433 3333332221 245999999999999999
Q ss_pred EEEEeCCceeEEEEEEEeec
Q psy12803 449 CISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 449 C~A~N~~G~~~~s~~L~V~~ 468 (902)
|.|.|..|..+.++.|.|..
T Consensus 79 C~a~n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 79 CTVKNSAGSVSSSCKLTIKA 98 (99)
T ss_dssp EEEEETTEEEEEEEEEEEEC
T ss_pred EEEEeCCCcEeEEEEEEEEe
Confidence 99999999999999998863
No 259
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.26 E-value=1.4e-11 Score=111.96 Aligned_cols=96 Identities=24% Similarity=0.239 Sum_probs=77.6
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+... .++.+.... ..++|.|.+++.+|+|.|
T Consensus 12 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~-----~~~~L~i~~~~~~D~G~Y 84 (107)
T 3irg_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS--ERLSFPADG-----AEHGLLLTAALPTDAGVY 84 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC--SSEECCEET-----TEEEEEESSCCGGGCEEE
T ss_pred CCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCC--CcEEEEeCC-----CEEEEEEccCCHHhCEEE
Confidence 4688888888899999999999999999999999999987665432 333332222 123699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p 470 (902)
+|.|.|..|..+.++.|.|..+|
T Consensus 85 ~C~a~n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 85 VCRARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEEEEETTEEEEEEEEEEEEC--
T ss_pred EEEEEcCCCcEEEEEEEEEEcCC
Confidence 99999999999999999998653
No 260
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=7.4e-12 Score=116.44 Aligned_cols=96 Identities=20% Similarity=0.249 Sum_probs=79.0
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+.. ...++..... + +|.|.+++.+|+|.|
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~-~~~~~~~~~~--~------~L~i~~v~~~D~G~Y 77 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVST-QDSRIKQLEN--G------VLQIRYAKLGDTGRY 77 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCT-TSTTEEEEET--T------EEEEESCCGGGCCCE
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcC-CCCeEEEccC--C------EEEEccCCcCCCEEE
Confidence 467787788888999999999999999999999999998776643 2333333222 2 499999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.|..|....++.|.|...+.+
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~~~~~p 102 (118)
T 2eo9_A 78 TCIASTPSGEATWSAYIEVQEFGVP 102 (118)
T ss_dssp EEEEECSSCEEEEECCEEEECCSCC
T ss_pred EEEEEcCCCcEEEEEEEEEEeCCCC
Confidence 9999999999999999999876544
No 261
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=6.3e-12 Score=115.26 Aligned_cols=100 Identities=16% Similarity=0.203 Sum_probs=81.2
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.|.|.|++++..+.. ...++.+.....+ .++|.|.+++.+|+|.|
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~-~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y 81 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISP-KSDHYTIQRDLDG----TCSLHTTASTLDDDGNY 81 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCT-TCSSEEEEECTTC----EEEEEESSCCTTTCSCC
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCC-CCCeEEEEECCCc----EEEEEECCCChhhCEEE
Confidence 467777778888999999999999999999999999998776643 2334444333222 24699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.|..|..+..+.|.|...+..
T Consensus 82 ~C~a~N~~g~~~~~~~l~V~~~~~~ 106 (110)
T 2dm2_A 82 TIMAANPQGRISCTGRLMVQAVNSG 106 (110)
T ss_dssp EEEEECTTCCEEECCCEEEECCSCC
T ss_pred EEEEEECCCeEEEEEEEEEECCCCC
Confidence 9999999999999999999876654
No 262
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.26 E-value=2.5e-11 Score=110.67 Aligned_cols=88 Identities=16% Similarity=0.105 Sum_probs=69.2
Q ss_pred ecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEE
Q psy12803 382 PIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGS 461 (902)
Q Consensus 382 ~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s 461 (902)
..+..+.|.|.+.|.|.|.++|++++..+.........+... ......++|.|.+++.+|+|.|+|+|.|.+|.++.+
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~ 91 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVT--NHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQ 91 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEE--CSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEec--CCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEE
Confidence 457889999999999999999999887765433221222221 222346779999999999999999999999999999
Q ss_pred EEEEeecCCC
Q psy12803 462 LILFESNAKT 471 (902)
Q Consensus 462 ~~L~V~~~p~ 471 (902)
+.|.|...|.
T Consensus 92 ~~l~V~~~P~ 101 (103)
T 1wwb_X 92 ISAHFMGWPG 101 (103)
T ss_dssp EEECCSCCCC
T ss_pred EEEEECCCCC
Confidence 9999987654
No 263
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.25 E-value=2.2e-11 Score=115.71 Aligned_cols=99 Identities=15% Similarity=0.146 Sum_probs=74.9
Q ss_pred CEEEEcCceeeeecCceEEEEEEeecc---CCceEEEEecCCeeee-cCCceEEEee-cCCCceeeEeEEEEeccCCCCC
Q psy12803 370 PQILIRNRRVGVPIGRTATLECEVEAF---PLSVRYWEFIDGTLIE-HDGVKYSISD-VDKGSYQYIMQLNISNVNISDF 444 (902)
Q Consensus 370 P~i~~~p~~~~v~~G~~v~L~C~a~g~---P~P~v~W~k~~~~l~~-~~~~~~~~~~-~~~~s~~~~stL~I~~V~~~Ds 444 (902)
+.|...+.++.+.+|++++|.|.+.+. |.|.|.|+|+...... ....++.+.. .......+..+|.|.+++.+|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 557778889999999999999999875 8999999985321111 1123333321 1111122456799999999999
Q ss_pred eEEEEEEEeCCceeEEEEEEEeec
Q psy12803 445 DTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 445 G~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
|.|+|+|.|..|..++++.|.|..
T Consensus 88 G~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEEEEEEECSSCEEEECCEEEEEC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999999999998
No 264
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.24 E-value=4e-11 Score=109.92 Aligned_cols=99 Identities=19% Similarity=0.261 Sum_probs=73.4
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCC---ceEEEEecCCeeeec-CCceEEEeec-CCCceeeEeEEEEeccCCCC
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPL---SVRYWEFIDGTLIEH-DGVKYSISDV-DKGSYQYIMQLNISNVNISD 443 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~---P~v~W~k~~~~l~~~-~~~~~~~~~~-~~~s~~~~stL~I~~V~~~D 443 (902)
.|.|...+..+.+.+|++++|.|.+.+.|. |.|.|++++...... ...++.+... .........+|.|.+++.+|
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 467777888899999999999999999998 999999876332211 1122222110 00011234679999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEEEee
Q psy12803 444 FDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 444 sG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
+|.|+|.|.|..|..++++.|.|.
T Consensus 84 ~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999999999999986
No 265
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.24 E-value=2.3e-11 Score=130.19 Aligned_cols=168 Identities=17% Similarity=0.310 Sum_probs=106.4
Q ss_pred eecCCcEEEEcCCeEEEEEecCC--CCCCceEEecCCCc--c--c-cc-C-----------Cccceec-----cCCcEEE
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATG--HPKPSIIWKTSENK--P--I-TL-G-----------SWKDSAV-----ASSTLNF 350 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G--~P~p~v~W~k~~~~--~--~-~~-~-----------~~~~~~~-----~~~sL~I 350 (902)
+..+..+.+.+|++|+|.|.+.+ .....+.|+|.... + + .. . ..+.... .+.+|+|
T Consensus 27 v~q~~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 106 (267)
T 3u1s_H 27 LVQSGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMEL 106 (267)
T ss_dssp EEECCCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEE
T ss_pred EEeeCCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEE
Confidence 34455678999999999999865 33567999984321 1 1 00 0 1122221 1225999
Q ss_pred EeeeeecCceeEEeecC-------------------------------------------CCCEEEEcCceeeeecCceE
Q psy12803 351 TRINRINMGAYMCLADN-------------------------------------------VPPQILIRNRRVGVPIGRTA 387 (902)
Q Consensus 351 ~~Vt~~DsG~YtC~A~N-------------------------------------------~~P~i~~~p~~~~v~~G~~v 387 (902)
.+++.+|+|.|.|.+.+ .+|.+........+.+|+.+
T Consensus 107 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~ 186 (267)
T 3u1s_H 107 RGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSSKSTSGGTA 186 (267)
T ss_dssp CSCCGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCGGGEETTEE
T ss_pred CCCChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCcccCCCCcE
Confidence 99999999999999851 11222211111123478999
Q ss_pred EEEEEeecc-C-CceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12803 388 TLECEVEAF-P-LSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILF 465 (902)
Q Consensus 388 ~L~C~a~g~-P-~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~ 465 (902)
+|.|.+.+. | .+.+.| ++..+.. ...........++.+...++|.|.....+| +.|+|.|.|..........|.
T Consensus 187 ~l~C~~~~~~p~~~~v~W--~~~~~~~-~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 262 (267)
T 3u1s_H 187 ALGCLVKDYFPEPVTVSW--NSGALTS-GVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 262 (267)
T ss_dssp EEEEEEEEEBSSCCEEEE--GGGTBCT-TEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECC
T ss_pred EEEEEEeEEECCCeEEEE--CCcccCC-CEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceEEEcc
Confidence 999999874 5 457999 4433311 101111122445677788899999998889 999999999887666555554
Q ss_pred e
Q psy12803 466 E 466 (902)
Q Consensus 466 V 466 (902)
+
T Consensus 263 ~ 263 (267)
T 3u1s_H 263 P 263 (267)
T ss_dssp C
T ss_pred c
Confidence 4
No 266
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.22 E-value=1e-11 Score=113.07 Aligned_cols=96 Identities=22% Similarity=0.309 Sum_probs=67.7
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.+...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+...... ... ... ++|.|.+++.+|+|.|
T Consensus 9 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~--~~~-~~~------~~L~i~~v~~~D~G~Y 79 (108)
T 3kvq_A 9 VAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGI--VLK-DGN------RNLTIRRVRKEDEGLY 79 (108)
T ss_dssp --CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTE--EEE-TTT------TEEEECSCCGGGCEEE
T ss_pred CCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCe--EEe-CCC------cEEEEeecCcccCEEE
Confidence 4677777778888999999999999999999999999988776543332 221 222 2499999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.|..|....++.|.|..++..
T Consensus 80 ~C~a~n~~g~~~~~~~l~V~~~~~~ 104 (108)
T 3kvq_A 80 TCQACSVLGCAKVEAFFIIEGAQEK 104 (108)
T ss_dssp EEEEC----CEEEEEEEEEEC----
T ss_pred EEEEEeCCCceEEEEEEEEeCCCcc
Confidence 9999999999999999999876543
No 267
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.22 E-value=9.5e-11 Score=137.31 Aligned_cols=163 Identities=17% Similarity=0.297 Sum_probs=105.9
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCC----CceEEecCC--Ccc--cc-c-----------CCccceec-----cCCcEEE
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPK----PSIIWKTSE--NKP--IT-L-----------GSWKDSAV-----ASSTLNF 350 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~----p~v~W~k~~--~~~--~~-~-----------~~~~~~~~-----~~~sL~I 350 (902)
..+..+.+.+|++|+|.|.+.+.+. ..|.|+|.. ..+ +. . ...+.... .+.+|.|
T Consensus 5 ~qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 84 (512)
T 1zvo_C 5 QESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNL 84 (512)
T ss_pred ECCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEE
Confidence 3456788999999999999987543 679999863 211 10 0 01222222 1248999
Q ss_pred EeeeeecCceeEEeecCCCC-------------------EEEEc-----Cceee--------eecCceEEEEEEeecc-C
Q psy12803 351 TRINRINMGAYMCLADNVPP-------------------QILIR-----NRRVG--------VPIGRTATLECEVEAF-P 397 (902)
Q Consensus 351 ~~Vt~~DsG~YtC~A~N~~P-------------------~i~~~-----p~~~~--------v~~G~~v~L~C~a~g~-P 397 (902)
.+++.+|+|.|.|.+.+... .+.+. +..+. ...++.++|.|.+.+. |
T Consensus 85 ~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P 164 (512)
T 1zvo_C 85 RSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHP 164 (512)
T ss_pred CcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeec
Confidence 99999999999999876320 11111 00111 1235789999999987 7
Q ss_pred Cc-eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEE
Q psy12803 398 LS-VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSL 462 (902)
Q Consensus 398 ~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~ 462 (902)
.| .|.|++++....... .......++.+...++|.|..+..+ .|.|+|.|.|..+.....+
T Consensus 165 ~p~~v~W~~~~~~~~~~~---~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~ 226 (512)
T 1zvo_C 165 TSVTVTWYMGTQSQPQRT---FPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEI 226 (512)
T ss_pred CceEEEEEcCcccCceEe---cCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEE
Confidence 65 899988543211000 0011123345667788999988877 9999999999998776554
No 268
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.21 E-value=7.5e-11 Score=121.24 Aligned_cols=150 Identities=21% Similarity=0.305 Sum_probs=93.9
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCC--ccccc--------CCccceecc------CCcEEEEeeeeecCce
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN--KPITL--------GSWKDSAVA------SSTLNFTRINRINMGA 360 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~--~~~~~--------~~~~~~~~~------~~sL~I~~Vt~~DsG~ 360 (902)
.+..+.+.+|++|+|.|.+.+.+ +.|.|+|... .+... ...+..... ..+|+|.+++.+|+|.
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~ 85 (207)
T 1ypz_E 7 SPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGT 85 (207)
T ss_dssp SCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEE
T ss_pred CCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEE
Confidence 45568899999999999998754 4799998542 11110 112222221 2479999999999999
Q ss_pred eEEeecCCC-----------------CEEEEc-------CceeeeecCceEEEEEEeecc-CC-ceEEEEecCCeeeecC
Q psy12803 361 YMCLADNVP-----------------PQILIR-------NRRVGVPIGRTATLECEVEAF-PL-SVRYWEFIDGTLIEHD 414 (902)
Q Consensus 361 YtC~A~N~~-----------------P~i~~~-------p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k~~~~l~~~~ 414 (902)
|.|.+.+.. -.+.+. +..+.+.. ..++|.|.+.+. |. +.|.|+++ ..+.. .
T Consensus 86 Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~v~~~~-~~~~l~C~~~g~~P~~~~v~W~~~-~~l~~-~ 162 (207)
T 1ypz_E 86 YFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPSVFIMK-NGTNVACLVKDFYPKEVTISLRSS-KKIVE-F 162 (207)
T ss_dssp EEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCEEEEEE-ETTEEEEEEEEESSSCCEEEEECS-SEEEE-C
T ss_pred EEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCeEEEeC-CCCeEEEEEeeEeCCCeEEEEecC-CcccC-C
Confidence 999997731 112221 11222222 247999999876 54 79999988 65543 2
Q ss_pred CceEEEeecCCCceeeEeEEEEeccC-CCCCeEEEEEEEeCCcee
Q psy12803 415 GVKYSISDVDKGSYQYIMQLNISNVN-ISDFDTYRCISKNEVDIA 458 (902)
Q Consensus 415 ~~~~~~~~~~~~s~~~~stL~I~~V~-~~DsG~YtC~A~N~~G~~ 458 (902)
...... ..++. +.+.... .+|.|.|+|.|.|..+..
T Consensus 163 ~~~~~~--~~~g~------y~~~~~~~~~~~~~ytC~v~~~~~~~ 199 (207)
T 1ypz_E 163 DPAIVI--SPSGK------YSAVKLGQYGDSNSVTCSVQHNSETV 199 (207)
T ss_dssp CCEEEE--CTTSS------EEEEECEEESSTTTCEEEEEETTEEE
T ss_pred ccceEE--cCCCc------EEEEEeecccCCCcEEEEEEECCccE
Confidence 222211 23344 2232333 367899999999988654
No 269
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.21 E-value=5.8e-11 Score=112.72 Aligned_cols=91 Identities=12% Similarity=0.045 Sum_probs=69.5
Q ss_pred ecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEE
Q psy12803 382 PIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGS 461 (902)
Q Consensus 382 ~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s 461 (902)
..+..+.|.|.+.|+|.|+|+|++++..+.........+...........++|.|.+++.+|+|.|+|+|.|.+|.++++
T Consensus 13 ~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t 92 (126)
T 1he7_A 13 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS 92 (126)
T ss_dssp CCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEE
Confidence 35678999999999999999999998777543333333322101111234679999999999999999999999999999
Q ss_pred EEEEeecCCCC
Q psy12803 462 LILFESNAKTP 472 (902)
Q Consensus 462 ~~L~V~~~p~~ 472 (902)
+.|.|...|..
T Consensus 93 ~~l~v~~~P~~ 103 (126)
T 1he7_A 93 IMAAFMDNPFE 103 (126)
T ss_dssp EEECCCSCTTS
T ss_pred EEEEEEcCCCC
Confidence 99998876643
No 270
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=4.4e-11 Score=111.26 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=74.5
Q ss_pred CCEEEE---cCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCe
Q psy12803 369 PPQILI---RNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFD 445 (902)
Q Consensus 369 ~P~i~~---~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG 445 (902)
+|.|.. ....+.+.+|+++.|.|.+.|.|.|.+.|++++..+. .....+ .... ..++|.|.+++.+|+|
T Consensus 21 ~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~--~~~~-----~~~~L~i~~~~~~D~G 92 (118)
T 2e7c_A 21 PPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHV--RTSD-----FDTVFFVRQAARSDSG 92 (118)
T ss_dssp EEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEE--EECS-----SEEEEEESSCCTTTCE
T ss_pred CCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEE--EECC-----CeEEEEECCCChhcCE
Confidence 566654 2456789999999999999999999999999877663 222222 2111 1346999999999999
Q ss_pred EEEEEEEeCCceeEEEEEEEeecCC
Q psy12803 446 TYRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 446 ~YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
.|+|.|.|..|..+.++.|.|.+.|
T Consensus 93 ~Y~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 93 EYELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEEEEEECSSCEECCEEEEEEECCC
T ss_pred EEEEEEEeCCCeEEEEEEEEEEcCC
Confidence 9999999999999999999998754
No 271
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.20 E-value=2.7e-11 Score=117.20 Aligned_cols=87 Identities=14% Similarity=0.135 Sum_probs=68.3
Q ss_pred CceeeeecCceEEEEEEeeccCCceEEEEecCC---------------------------eeeecCCceEEEeecCCCce
Q psy12803 376 NRRVGVPIGRTATLECEVEAFPLSVRYWEFIDG---------------------------TLIEHDGVKYSISDVDKGSY 428 (902)
Q Consensus 376 p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~---------------------------~l~~~~~~~~~~~~~~~~s~ 428 (902)
+.++.+.+|++++|.|.+.|.|.|.|.|++++. ..+.....++.+....
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~---- 100 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTK---- 100 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEET----
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCC----
Confidence 567889999999999999999999999999882 1111122223332221
Q ss_pred eeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 429 QYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 429 ~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
..++|.|.+++.+|+|.|+|+|.|.+|.++.++.|.|.
T Consensus 101 -~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 101 -DRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp -TEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred -CEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 13569999999999999999999999999999999886
No 272
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=2.8e-11 Score=108.59 Aligned_cols=90 Identities=19% Similarity=0.306 Sum_probs=74.1
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+.... ... ... ..+|.|.+++.+|+|.|
T Consensus 10 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~-~~~---~~~------~~~L~i~~v~~~D~G~Y 79 (99)
T 2yr3_A 10 VAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYAR-STC---EAG------VAELHIQDALPEDHGTY 79 (99)
T ss_dssp EEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCC-CEE---ETT------EEEEEECSCCTTCCBCE
T ss_pred cCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccc-eEe---eCC------eEEEEECCCChhhCEEE
Confidence 46888888888999999999999999999999999999887664321 111 111 24599999999999999
Q ss_pred EEEEEeCCceeEEEEEEEee
Q psy12803 448 RCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~ 467 (902)
+|.|.|..|..+.++.|.|.
T Consensus 80 ~C~a~N~~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 80 TCLAENALGQVSCSAWVTVH 99 (99)
T ss_dssp EEEEECSSCEEEEECCEEEC
T ss_pred EEEEEECCCeEEEEEEEEEC
Confidence 99999999999998888773
No 273
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.19 E-value=2.7e-11 Score=108.81 Aligned_cols=92 Identities=20% Similarity=0.288 Sum_probs=70.3
Q ss_pred CCEEEEcC----ceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCc-eEEEeecCCCceeeEeEEEEeccCCCC
Q psy12803 369 PPQILIRN----RRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGV-KYSISDVDKGSYQYIMQLNISNVNISD 443 (902)
Q Consensus 369 ~P~i~~~p----~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~-~~~~~~~~~~s~~~~stL~I~~V~~~D 443 (902)
+|.|...+ ..+.+.+|+++.|.|.+.+.|.|.+.|++++..+...... .+... ... ++|.|.+++.+|
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~-~~~------~~L~i~~v~~~D 76 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR-NQH------WSLIMESVVPSD 76 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEE-GGG------TEEEECSCCGGG
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEe-cCe------EEEEEccCCcCC
Confidence 45665433 4577889999999999999999999999987766433221 11111 111 249999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEEEee
Q psy12803 444 FDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 444 sG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
+|.|+|.|.|..|..+.++.|.|.
T Consensus 77 ~G~Y~C~a~N~~g~~~~~~~l~Vv 100 (100)
T 3caf_A 77 KGNYTCVVENEYGSINHTYHLDVV 100 (100)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEEEEEEEeCCCEEEEEEEEEEC
Confidence 999999999999999999988873
No 274
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.19 E-value=9.4e-11 Score=130.65 Aligned_cols=187 Identities=14% Similarity=0.129 Sum_probs=114.7
Q ss_pred cccccccccCCCCCCCCcccccCCcccCCceeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec
Q psy12803 264 ICAYKRESCSLLPNSETSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV 343 (902)
Q Consensus 264 ~c~~kN~scs~~s~~~~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~ 343 (902)
.|.+.|..+... ....+.+..+|.+.. .+..+.+.+|+++.|.|.+.+.|.+.+.|+|++..+......+....
T Consensus 79 ~C~a~n~~g~~~-~~~~l~V~~~P~~~~-----~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~ 152 (389)
T 2jll_A 79 DCEAASRIGGHQ-KSMYLDIEYAPKFIS-----NQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTY 152 (389)
T ss_dssp EEEEECSSCEEE-EEEEEEEEEEEEECC-----SCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEE
T ss_pred EEEEEeCCCCcc-eEEEEEEEeCCEEec-----CcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEe
Confidence 455555554432 223444555555432 22334788999999999999999999999998765543322222222
Q ss_pred ---cCCcEEEEeeeeecCceeEEeecCC------CCEEEE-----cCceee--eecCceEEEEEEee----ccCCc--eE
Q psy12803 344 ---ASSTLNFTRINRINMGAYMCLADNV------PPQILI-----RNRRVG--VPIGRTATLECEVE----AFPLS--VR 401 (902)
Q Consensus 344 ---~~~sL~I~~Vt~~DsG~YtC~A~N~------~P~i~~-----~p~~~~--v~~G~~v~L~C~a~----g~P~P--~v 401 (902)
...+|.|.+++.+|+|.|+|.|.|. ...+.. .+..+. ......+.|.|... +.|.. .+
T Consensus 153 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v 232 (389)
T 2jll_A 153 STGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQV 232 (389)
T ss_dssp ECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEE
T ss_pred ccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEE
Confidence 2347999999999999999999991 111111 111121 22356788888742 22433 46
Q ss_pred EEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 402 YWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 402 ~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
.|.+.+... .. ....... ...|.|.++...|.+.|+|.|.|..|....+..+.+.
T Consensus 233 ~~~~~~~~~-----~~-~~~~~~~-----~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~ 287 (389)
T 2jll_A 233 DVKEVASEI-----WK-IVRSHGV-----QTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQ 287 (389)
T ss_dssp EEEETTCSC-----CE-EEECSTT-----CSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEE
T ss_pred EEEECCCcc-----cE-EeeccCC-----cceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEE
Confidence 776654321 11 1111111 1249999999999999999999999976544444443
No 275
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.18 E-value=1e-10 Score=104.63 Aligned_cols=92 Identities=22% Similarity=0.274 Sum_probs=73.1
Q ss_pred EEEEcCceeeeecCceEEEEEEeecc-CCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEE
Q psy12803 371 QILIRNRRVGVPIGRTATLECEVEAF-PLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRC 449 (902)
Q Consensus 371 ~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC 449 (902)
.+...+.++.+.+|+++.|.|.+.+. |.|.+.|++++..+... .++.+.... + .++|.|.+++.+|+|.|+|
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~--~~~~~~~~~-~----~~~L~i~~v~~~D~G~Y~C 75 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENS--EKYEITYED-G----VAILYVKDITKLDDGTYRC 75 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSS--SSEEEEEET-T----EEEEEECSCCGGGCEEEEE
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCC--CCEEEEEcC-C----eEEEEEecCChhhCeEEEE
Confidence 34456778889999999999999997 99999999987766432 333332211 1 3459999999999999999
Q ss_pred EEEeCCceeEEEEEEEeecC
Q psy12803 450 ISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 450 ~A~N~~G~~~~s~~L~V~~~ 469 (902)
.|.|..|....++.|.|.+.
T Consensus 76 ~a~n~~g~~~~~~~l~V~~~ 95 (97)
T 2bk8_A 76 KVVNDYGEDSSYAELFVKGV 95 (97)
T ss_dssp EEECSSCEEEEEEEEEETTT
T ss_pred EEECCCCeEeEEEEEEEEec
Confidence 99999999999999998753
No 276
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=3.8e-11 Score=112.76 Aligned_cols=101 Identities=18% Similarity=0.204 Sum_probs=75.7
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeecc---CCceEEEEecCCeeee-cCCceEEEeec-CCCceeeEeEEEEeccCCCC
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAF---PLSVRYWEFIDGTLIE-HDGVKYSISDV-DKGSYQYIMQLNISNVNISD 443 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~---P~P~v~W~k~~~~l~~-~~~~~~~~~~~-~~~s~~~~stL~I~~V~~~D 443 (902)
.+.|+..|.++.+.+|++++|.|.+.+. |.|.|+|+|+...... ....++.+... .........+|.|.+|+.+|
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 91 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGD 91 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTT
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhh
Confidence 4567778889999999999999999875 7999999986422211 11233333211 11122245679999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEEEeecC
Q psy12803 444 FDTYRCISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 444 sG~YtC~A~N~~G~~~~s~~L~V~~~ 469 (902)
+|.|+|+|.|..|..++.+.|.|..+
T Consensus 92 ~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 92 RGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp CSCEEEEEECSSCEEEEEECCEEECC
T ss_pred CEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 99999999999999999999999864
No 277
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.17 E-value=4.4e-11 Score=106.86 Aligned_cols=87 Identities=15% Similarity=0.180 Sum_probs=70.8
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+..+.+.+|+++.|.|.+.+.| |.+.|++++..+... .++.+. . .+|.|.+++.+|+|.|+
T Consensus 9 pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~--~~~~~~---~------~~L~i~~~~~~D~G~Y~ 76 (95)
T 2ckn_A 9 PWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVES--NRTRIT---G------EEVEVRDSIPADSGLYA 76 (95)
T ss_dssp SCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCC--SSEEEC---S------SEEEESSCCGGGSEEEE
T ss_pred CCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCC--CCEEEe---C------CEEEECCCChHHCEEEE
Confidence 55666667788899999999999999998 899999977666432 233332 1 24999999999999999
Q ss_pred EEEEeCCceeEEEEEEEee
Q psy12803 449 CISKNEVDIAKGSLILFES 467 (902)
Q Consensus 449 C~A~N~~G~~~~s~~L~V~ 467 (902)
|.|.|..|..+.++.|.|.
T Consensus 77 C~a~n~~g~~~~~~~l~V~ 95 (95)
T 2ckn_A 77 CVTSSPSGSDTTYFSVNVS 95 (95)
T ss_dssp EEEEETTEEEEEEEEEEEC
T ss_pred EEeccCCCcEEEEEEEEEC
Confidence 9999999999999888773
No 278
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.17 E-value=1.7e-11 Score=112.33 Aligned_cols=93 Identities=20% Similarity=0.346 Sum_probs=77.2
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+.. ..++.+.... ...+|.|.+++.+|+|.|
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~--~~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y 85 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLST--SARHQVTTTK-----YKSTFEISSVQASDEGNY 85 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTT--CSSEEEEECS-----SEEEEEECCCCSSCCSEE
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCC--CCCEEEEECC-----CEEEEEECcCCchhCEEE
Confidence 568888899999999999999999999999999999998876643 2233333221 134699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEee
Q psy12803 448 RCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~ 467 (902)
+|.|.|..|..+.++.|.|.
T Consensus 86 ~C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 86 SVVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp EECCBCSSCBCCEEEEEEEC
T ss_pred EEEEEeCCCeEEEEEEEEEE
Confidence 99999999999999999885
No 279
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.16 E-value=1e-11 Score=116.30 Aligned_cols=103 Identities=20% Similarity=0.343 Sum_probs=79.8
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCce-EEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCC-e
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSV-RYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDF-D 445 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~-v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~Ds-G 445 (902)
.+|.|.. +..+.+.+|+++.|.|.+.+.|.|. |.|++++..+......++.+...... ....++|.|.+++.+|+ |
T Consensus 13 ~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~~G 90 (122)
T 2cry_A 13 GPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTE-EGVISTLTISNIVRADFQT 90 (122)
T ss_dssp SSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEET-TEEEEEEECTTCCHHHHHS
T ss_pred cCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCC-CceEEEEEEcCCChhhCCc
Confidence 5788877 7778899999999999999999997 99999988775422233333211100 12356799999999999 9
Q ss_pred EEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 446 TYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 446 ~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
.|+|.|.|.+|.....+.|.|......
T Consensus 91 ~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 117 (122)
T 2cry_A 91 IYNCTAWNSFGSDTEIIRLKEQGSEMS 117 (122)
T ss_dssp CEEEEEECSSCEEEEEECCCCSCSSCC
T ss_pred eEEEEEECCCCeEEEEEEEEECCCCCC
Confidence 999999999999999999998865443
No 280
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=3e-11 Score=109.75 Aligned_cols=93 Identities=16% Similarity=0.134 Sum_probs=73.0
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+.++.+.+|+++.|.|.+ .|.|.+.|++++..+... .++.+..... ..+|.|.+++.+|+|.|
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~--~r~~i~~~~~-----~~~L~I~~v~~~D~G~Y 76 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQES--DRLKVVQKGR-----IHKLVIANALTEDEGDY 76 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCC--SSEEEEECSS-----EEEEEESSCCGGGCSEE
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCC--CcEEEEEeCC-----EEEEEECCCChhhCEEE
Confidence 35677778888999999999999999 899999999988776543 3333333221 24599999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
+|.|.|. ..+.++.|.|.++|.
T Consensus 77 ~C~a~N~--~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 77 VFAPDAY--NVTLPAKVHVISGPS 98 (100)
T ss_dssp EEEESSS--CCCEEEEEEEECCSC
T ss_pred EEEEcCC--CeeEEEEEEEeCCCC
Confidence 9999998 556778888876543
No 281
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.13 E-value=1.4e-10 Score=130.53 Aligned_cols=168 Identities=18% Similarity=0.261 Sum_probs=107.2
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--------------CCceEEecCCCc----ccc--cC--------Ccc-c-------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--------------KPSIIWKTSENK----PIT--LG--------SWK-D------- 340 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--------------~p~v~W~k~~~~----~~~--~~--------~~~-~------- 340 (902)
.+..+.+.+|++|+|.|..+..+ ...|.|++.... ++. .+ ... .
T Consensus 164 q~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~ 243 (401)
T 3f8u_B 164 HTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDD 243 (401)
T ss_dssp SCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESC
T ss_pred CCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeecc
Confidence 45568899999999999976432 346899874211 110 00 000 0
Q ss_pred -----eeccCCcEEEEeeeeecCceeEEeecC--------------CCCEEEEcCceee-eecCc-eEEEEEEeecc-CC
Q psy12803 341 -----SAVASSTLNFTRINRINMGAYMCLADN--------------VPPQILIRNRRVG-VPIGR-TATLECEVEAF-PL 398 (902)
Q Consensus 341 -----~~~~~~sL~I~~Vt~~DsG~YtC~A~N--------------~~P~i~~~p~~~~-v~~G~-~v~L~C~a~g~-P~ 398 (902)
....+.+|+|.+++.+|+|.|.|.+.+ .+|.+...+.... +..|+ .++|.|.+.+. |.
T Consensus 244 ~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP~ 323 (401)
T 3f8u_B 244 DEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYPS 323 (401)
T ss_dssp CCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEBSS
T ss_pred cccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCcCC
Confidence 112346899999999999999999977 4555554443332 34676 79999999986 65
Q ss_pred --ceEEEE-ecC--CeeeecCCce--EEEeecCCCceeeEeEEEEeccCCCCC-eEEEEEEEeCC---ceeEEEEEE
Q psy12803 399 --SVRYWE-FID--GTLIEHDGVK--YSISDVDKGSYQYIMQLNISNVNISDF-DTYRCISKNEV---DIAKGSLIL 464 (902)
Q Consensus 399 --P~v~W~-k~~--~~l~~~~~~~--~~~~~~~~~s~~~~stL~I~~V~~~Ds-G~YtC~A~N~~---G~~~~s~~L 464 (902)
+.|+|+ +++ +......... .......++.+...++|.|...+.+|. +.|+|.+.|.. +..+.+++|
T Consensus 324 ~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~sL~~g~rs~sVtL 400 (401)
T 3f8u_B 324 GGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPSLPASGRSAEVTL 400 (401)
T ss_dssp TTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTTSCTTCEEEEEEC
T ss_pred CCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCCCCCCcceEEEEe
Confidence 789995 654 1111111111 011234567788888899887754455 49999999986 444555443
No 282
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.13 E-value=2.5e-10 Score=114.44 Aligned_cols=100 Identities=26% Similarity=0.362 Sum_probs=80.6
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+.. ...++.+.....+ .++|.|.+++.+|+|.|
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y 77 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIA-DGLKYRIQEFKGG----YHQLIIASVTDDDATVY 77 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCC-CSSSEEEEEETTT----EEEEEECSCCGGGCSEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECcc-CCCcEEEEEcCCC----EEEEEECcCCHHhCEEE
Confidence 378899888899999999999999999999999999998766643 3333443332222 23599999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.|..|....++.|.|..++..
T Consensus 78 ~C~~~n~~g~~~~~~~l~V~~~p~~ 102 (197)
T 2j8h_A 78 QVRATNQGGSVSGTASLEVEVPAKI 102 (197)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEEEE
T ss_pred EEEEEECCCceeEEEEEEEcCCCcC
Confidence 9999999999999999988765543
No 283
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.11 E-value=1.7e-10 Score=103.38 Aligned_cols=89 Identities=19% Similarity=0.141 Sum_probs=68.7
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.++.|...+.++.+.+|++++|.|.+.+ |.+.+.|++++..+..... +.+..... ..+|.|.+++.+|+|.|
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~--~~i~~~g~-----~~~L~I~~v~~~D~G~Y 75 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPD--CEIIEDGK-----KHILILHNCQLGMTGEV 75 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTT--EEEEEETT-----EEEEEECSCCGGGCEEE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCC--EEEEEECC-----EEEEEECCCChhhCEEE
Confidence 3678888899999999999999999986 4588999998877654333 33332221 24599999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeec
Q psy12803 448 RCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~ 468 (902)
+|.|.|. ..++.|.|.+
T Consensus 76 ~C~a~n~----~~sa~L~V~~ 92 (93)
T 1waa_A 76 SFQAANT----KSAANLKVKE 92 (93)
T ss_dssp EEEETTE----EEEEEEEEEC
T ss_pred EEEECCC----cEEEEEEEEc
Confidence 9999884 4667777764
No 284
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.11 E-value=2e-10 Score=101.53 Aligned_cols=84 Identities=19% Similarity=0.238 Sum_probs=68.8
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
++.|...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+.... . .+|.|.+++.+|+|.|+
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~----------~------~~L~i~~v~~~d~G~Y~ 66 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET----------K------KLYMVPYVDLEHQGTYW 66 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC----------S------SEEEESSCCGGGCEEEE
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC----------C------CeEEECCCCHHhCEEEE
Confidence 4677888888899999999999999999999999999876543211 1 24999999999999999
Q ss_pred EEEEeCCceeE-EEEEEEeec
Q psy12803 449 CISKNEVDIAK-GSLILFESN 468 (902)
Q Consensus 449 C~A~N~~G~~~-~s~~L~V~~ 468 (902)
|.|.|..|... ..+.|.|.+
T Consensus 67 C~a~n~~g~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 67 CHVYNDRDSQDSKKVEIIIDE 87 (91)
T ss_dssp EEEECSSCEEECCCEEEEEC-
T ss_pred EEEEcCCCCEEeeeEEEEEeh
Confidence 99999999765 567777754
No 285
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.11 E-value=2.5e-10 Score=114.58 Aligned_cols=102 Identities=15% Similarity=0.133 Sum_probs=79.1
Q ss_pred CCEEEEcCceeeeecCceEEEEEEee-ccCCceEEEEecCCeeeecCCceEEEeecCCCceee--EeEEEEeccCCCCCe
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVE-AFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQY--IMQLNISNVNISDFD 445 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~-g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~--~stL~I~~V~~~DsG 445 (902)
+|.|...+.++.+.+|+++.|.|.+. +.|.+.+.|++++..+......++.+....+....+ .++|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 67888999999999999999999999 999999999998776644322334443333322222 577999999999999
Q ss_pred EEEEEEEeCCceeEEE-EEEEeecCC
Q psy12803 446 TYRCISKNEVDIAKGS-LILFESNAK 470 (902)
Q Consensus 446 ~YtC~A~N~~G~~~~s-~~L~V~~~p 470 (902)
.|+|.|.|..+..... +.|.|..+|
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~p 107 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGLP 107 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCSC
T ss_pred EEEEEEEeCCCceecccEEEEEecCC
Confidence 9999999998876443 788887654
No 286
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.10 E-value=3.1e-10 Score=102.76 Aligned_cols=97 Identities=18% Similarity=0.211 Sum_probs=72.6
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCC------ceEEEeecCCCceeeEeEEEEeccCCC
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDG------VKYSISDVDKGSYQYIMQLNISNVNIS 442 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~------~~~~~~~~~~~s~~~~stL~I~~V~~~ 442 (902)
+|.+...+.++.+.+|++++|.|.+.+.|.+.+.|++++........ .++.+..... ...+|.|.+++.+
T Consensus 6 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~L~I~~v~~~ 81 (108)
T 3m45_A 6 SQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASW----HELSISVSDVSLS 81 (108)
T ss_dssp --CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESS----SEEEEEECSCCGG
T ss_pred CCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCC----CcEEEEECCCChh
Confidence 35566667788999999999999999999999999987763222111 1333221111 1356999999999
Q ss_pred CCeEEEEEEEeCCceeEEEEEEEeecCC
Q psy12803 443 DFDTYRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 443 DsG~YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
|+|.|+|.|.| .+..+..+.|.|..+|
T Consensus 82 D~G~Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 82 DEGQYTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp GCEEEEEEECS-SSCEEEEEEEEEECCC
T ss_pred HCeEEEEEEEc-CCCcEEEEEEEEEcCC
Confidence 99999999999 8989999999988653
No 287
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.10 E-value=2e-10 Score=104.09 Aligned_cols=93 Identities=19% Similarity=0.179 Sum_probs=71.2
Q ss_pred CEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEE
Q psy12803 370 PQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRC 449 (902)
Q Consensus 370 P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC 449 (902)
+.|...+.++.+.+|++++|.|.+.+ |.+.+.|++++..+......++.+..... ..+|.|.+++.+|+|.|+|
T Consensus 8 ~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~-----~~~L~I~~~~~~D~G~Y~C 81 (103)
T 1x44_A 8 IMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGK-----KHILIIEGATKADAAEYSV 81 (103)
T ss_dssp CCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETT-----EEEEEEEEECTTTCSEEEE
T ss_pred ceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCC-----EEEEEECCCCcccCEEEEE
Confidence 34666778889999999999999987 77999999988776544322444433221 3469999999999999999
Q ss_pred EEEeCCceeEEEEEEEeecCCCC
Q psy12803 450 ISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 450 ~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
.|.| .+.++.|.|...+.+
T Consensus 82 ~a~n----~~~~~~l~V~~~p~p 100 (103)
T 1x44_A 82 MTTG----GQSSAKLSVDLKSGP 100 (103)
T ss_dssp EETT----EEEEEEEEEECCCSC
T ss_pred EECC----CcEEEEEEEeCCCCC
Confidence 9988 577788888776543
No 288
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.08 E-value=5.3e-11 Score=108.08 Aligned_cols=71 Identities=23% Similarity=0.350 Sum_probs=57.3
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceecc---CCcEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVA---SSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~---~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+.++.+.+|+++.|.|.+.|.|.|.|+|+|++..+......+..... ..+|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 84 (100)
T 3knb_A 11 LPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp CCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEE
Confidence 456788999999999999999999999999987665443332332222 23799999999999999999998
No 289
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.07 E-value=2e-10 Score=117.33 Aligned_cols=97 Identities=18% Similarity=0.161 Sum_probs=77.0
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEecc-CCCCCeE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNV-NISDFDT 446 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V-~~~DsG~ 446 (902)
.+|.|...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+.. ............ .+.|.|.++ +.+|+|.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~-~~~~~~~~~~~~-----~~~L~i~~v~~~~d~G~ 78 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSN-QRFEVIEFDDGS-----GSVLRIQPLRTPRDEAI 78 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC-TTEEEEEEGGGT-----EEEEEECSCCTTTTCEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCC-CceeEEEEcCCC-----ceEEEEeccCCCCCCeE
Confidence 368888888899999999999999999999999999998766643 222221111111 346999999 5999999
Q ss_pred EEEEEEeCCceeEEEEEEEeecCC
Q psy12803 447 YRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 447 YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
|+|.|.|..|....++.|.|...+
T Consensus 79 Y~C~a~n~~g~~~~~~~l~V~~~~ 102 (212)
T 2yd6_A 79 YECVASNNVGEISVSTRLTVLRED 102 (212)
T ss_dssp EEEEEEETTEEEEEEEEEEEECGG
T ss_pred EEEEEEcCCCcEEEEEEEEEeccC
Confidence 999999999999999999987653
No 290
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=3.5e-10 Score=101.87 Aligned_cols=86 Identities=15% Similarity=0.172 Sum_probs=69.3
Q ss_pred cCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeC
Q psy12803 375 RNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNE 454 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~ 454 (902)
.+..+.+.+|+.++|.|.+.+.| |.+.|++++..+.... ++.+. . .+|.|.+++.+|+|.|+|.|.|.
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~--~~~~~---~------~~L~i~~v~~~D~G~Y~C~a~n~ 76 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESN--RTRIT---G------EEVEVQDSVPADSGLYACVTSSP 76 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCS--SEEEC---S------SEEEETTCCTTTCEEEEEEEEET
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCC--cEEEE---C------CEEEEccCCHHHCEEEEEEEEeC
Confidence 34566788999999999999987 7999999887664322 33332 1 24999999999999999999999
Q ss_pred CceeEEEEEEEeecCCCC
Q psy12803 455 VDIAKGSLILFESNAKTP 472 (902)
Q Consensus 455 ~G~~~~s~~L~V~~~p~~ 472 (902)
.|.....+.|.|...++.
T Consensus 77 ~g~~~~~~~l~V~~~~~s 94 (99)
T 2cr3_A 77 SGSDTTYFSVNVSDALPS 94 (99)
T ss_dssp TEEEEEEEEECBCSCCSC
T ss_pred CceEEEEEEEEEecCCCC
Confidence 999999999998876543
No 291
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.06 E-value=3.8e-10 Score=112.65 Aligned_cols=99 Identities=25% Similarity=0.349 Sum_probs=79.9
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+... .++.+..... .++|.|.+++.+|+|.|
T Consensus 6 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y 78 (197)
T 3lcy_A 6 EAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQS--RKYKMSSDGR-----THTLTVMTEEQEDEGVY 78 (197)
T ss_dssp EEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCC--SSEEEEESSS-----EEEEEEECCSGGGCEEE
T ss_pred CCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCC--ccEEEEeCCC-----EEEEEEecCCccCCEEE
Confidence 3678888888899999999999999999999999999988776443 2333332221 34699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTPV 473 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~~ 473 (902)
+|.|.|..+....++.|.|...+...
T Consensus 79 ~C~~~n~~~~~~~~~~l~v~~~p~~~ 104 (197)
T 3lcy_A 79 TCIATNEVGEVETSSKLLLQATPQFH 104 (197)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEEEEC
T ss_pred EEEEECCCCceeEEEEEEEEcCCCCC
Confidence 99999999999999999887765443
No 292
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.06 E-value=1.1e-10 Score=108.22 Aligned_cols=98 Identities=20% Similarity=0.303 Sum_probs=69.8
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCC---ceEEEeecCCCceeeEeEEEEeccCCCCC
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDG---VKYSISDVDKGSYQYIMQLNISNVNISDF 444 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~---~~~~~~~~~~~s~~~~stL~I~~V~~~Ds 444 (902)
.+|.|...+..+.+.+|+++.|.|.+.|.|.|.+.|++++..+..... ..... ..++. .....|.|.+++.+|+
T Consensus 8 ~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~i~~~~v~~~D~ 84 (117)
T 2v9t_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRML--LPSGS-LFFLRIVHGRKSRPDE 84 (117)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEE--CTTSC-EEESSCCCBTTBCSSC
T ss_pred CCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEE--ecCCc-EEEEEEEeCCCCcCcC
Confidence 468888888888999999999999999999999999998776643221 11111 11222 1122233446789999
Q ss_pred eEEEEEEEeCCceeE-EEEEEEeec
Q psy12803 445 DTYRCISKNEVDIAK-GSLILFESN 468 (902)
Q Consensus 445 G~YtC~A~N~~G~~~-~s~~L~V~~ 468 (902)
|.|+|.|.|..|... ..+.|.+..
T Consensus 85 G~Y~C~a~N~~G~~~s~~~~l~~~~ 109 (117)
T 2v9t_A 85 GVYVCVARNYLGEAVSHDASLEVAA 109 (117)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEC-
T ss_pred EEEEEEEEeCccceEeeeEEEEhhh
Confidence 999999999999885 455665543
No 293
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.06 E-value=6.2e-10 Score=103.43 Aligned_cols=85 Identities=15% Similarity=0.047 Sum_probs=66.5
Q ss_pred ceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12803 385 RTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKGSLIL 464 (902)
Q Consensus 385 ~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L 464 (902)
..+.|.|.+.|.|.|.+.|++++..+......++...... ....++|.|.+++.+|+|.|+|+|.|..|..++++.|
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 97 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEG---EISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTING 97 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECS---SEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccC---ccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEE
Confidence 6678999999999999999998877655433333332211 1234579999999999999999999999999999999
Q ss_pred EeecCCCC
Q psy12803 465 FESNAKTP 472 (902)
Q Consensus 465 ~V~~~p~~ 472 (902)
.|...|..
T Consensus 98 ~v~~~P~~ 105 (118)
T 1wwc_A 98 HFLKEPFP 105 (118)
T ss_dssp CCSCCCCC
T ss_pred EEccCCCc
Confidence 88876543
No 294
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.06 E-value=4e-10 Score=114.99 Aligned_cols=99 Identities=22% Similarity=0.381 Sum_probs=79.8
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCC-CCCeE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNI-SDFDT 446 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~-~DsG~ 446 (902)
.+|.|...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+.. ...++.+.....+ .++|.|.+++. +|+|.
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~~----~~~L~i~~v~~~~d~G~ 79 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSG-TQSRYTVLEQPGG----ISILRIEPVRAGRDDAP 79 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCT-TSTTEEEEEETTT----EEEEEESSCCTTTTCSE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCC-CcceeEEEEcCCC----eEEEEEEecCCCCcCce
Confidence 478999999999999999999999999999999999998766542 2333333322222 24699999999 99999
Q ss_pred EEEEEEeCCce-eEEEEEEEeecCCC
Q psy12803 447 YRCISKNEVDI-AKGSLILFESNAKT 471 (902)
Q Consensus 447 YtC~A~N~~G~-~~~s~~L~V~~~p~ 471 (902)
|+|.|.|..|. .+..+.|.|...+.
T Consensus 80 Y~C~~~n~~g~~~~~~~~l~V~~~~~ 105 (212)
T 2yd1_A 80 YECVAENGVGDAVSADATLTIYEGDK 105 (212)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTC
T ss_pred EEEEEEeCCCCeEEeeEEEEEecccC
Confidence 99999999998 78888998886543
No 295
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.06 E-value=8.5e-10 Score=102.76 Aligned_cols=94 Identities=16% Similarity=0.233 Sum_probs=69.3
Q ss_pred CceeeeecCceEEEEEEeeccC--CceEEEEecCCeeee----cCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEE
Q psy12803 376 NRRVGVPIGRTATLECEVEAFP--LSVRYWEFIDGTLIE----HDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRC 449 (902)
Q Consensus 376 p~~~~v~~G~~v~L~C~a~g~P--~P~v~W~k~~~~l~~----~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC 449 (902)
+..+.+.+|++++|.|.+.+.| .+.+.|++++..+.. ........ ........++|.|.+++.+|+|.|+|
T Consensus 15 ~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~I~~v~~~DsG~Y~C 91 (122)
T 3s35_X 15 SHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQS---GSEMKKFLSTLTIDGVTRSDQGLYTC 91 (122)
T ss_dssp CSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEE---ETTEEEEEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeecccccc---CCceeeEEEEEEECCCCcccCEEEEE
Confidence 3445889999999999999954 568999988774321 01111100 01111235679999999999999999
Q ss_pred EEEeCCceeEEEEEEEeecCCCC
Q psy12803 450 ISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 450 ~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
.|.|..|....++.|.|.++|.+
T Consensus 92 ~a~n~~g~~~~~~~l~V~~~p~i 114 (122)
T 3s35_X 92 AASSGLMTKKNSTFVRVHEKPFV 114 (122)
T ss_dssp EEECSSCEEEEEEEEEEEEEECC
T ss_pred EEccCCCceEEEEEEEEeccCeE
Confidence 99999999999999999887655
No 296
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.06 E-value=7.2e-11 Score=108.68 Aligned_cols=74 Identities=26% Similarity=0.463 Sum_probs=58.4
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec-cCCcEEEEeeeeecCceeEEeecCC
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV-ASSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~-~~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
+..+.++.+.+|+++.|.|.+.|.|.|.|+|+|++..+........... ...+|.|.+++.+|+|.|+|.|.|.
T Consensus 17 ~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 17 LRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred EeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 4456778999999999999999999999999998766544332222222 1237999999999999999999983
No 297
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.05 E-value=5.4e-10 Score=101.22 Aligned_cols=106 Identities=15% Similarity=0.255 Sum_probs=72.5
Q ss_pred eeEEeecCCCCEEEEcCceeeeecCceEEEEEEeeccC--CceEEEEecCCeeeecCCce-EEEeecCCCceeeEeEEEE
Q psy12803 360 AYMCLADNVPPQILIRNRRVGVPIGRTATLECEVEAFP--LSVRYWEFIDGTLIEHDGVK-YSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 360 ~YtC~A~N~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P--~P~v~W~k~~~~l~~~~~~~-~~~~~~~~~s~~~~stL~I 436 (902)
.|.|.. ..+|.|...+..+.+.+|++++|.|.+.+.| .+.+.|++++..+....... .+............++|.|
T Consensus 2 ~~~c~~-~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I 80 (112)
T 3so5_A 2 GFVCDD-FPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRL 80 (112)
T ss_dssp -------CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEE
T ss_pred ceecCC-CCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEE
Confidence 345532 3678999988888999999999999999654 57999999876653211111 1111111111223467999
Q ss_pred eccCCCCCeEEEEEEEeCCcee-EEEEEEEe
Q psy12803 437 SNVNISDFDTYRCISKNEVDIA-KGSLILFE 466 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G~~-~~s~~L~V 466 (902)
.+++.+|+|.|+|.|.|..|.. +..+.|.|
T Consensus 81 ~~v~~~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 81 RNVEFTSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred eccccccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 9999999999999999999984 57777766
No 298
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.05 E-value=2.7e-10 Score=102.94 Aligned_cols=93 Identities=18% Similarity=0.251 Sum_probs=73.6
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+.++.+.+|+++.|.|.+.+ |.+.+.|++++..+.... ++.+..... .++|.|.+++.+|+|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~--~~~~~~~~~-----~~~L~I~~v~~~D~G~Y 78 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQ--KYDVVCEGT-----MAMLVIRGASLKDAGEY 78 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSS--SEEEEEETT-----EEEEEESSCCTTTCSEE
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCC--CEEEEECCC-----EEEEEECCCCcccCEEE
Confidence 4688888888899999999999999997 888999999887764433 333332221 34699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.| ...++.|.|..++..
T Consensus 79 ~C~a~n----~~~~~~l~V~~~p~~ 99 (103)
T 2edf_A 79 TCEVEA----SKSTASLHVEEKASG 99 (103)
T ss_dssp EEECSS----CEEEEEEEECCCSSS
T ss_pred EEEEcc----CCcEEEEEEeCCCCC
Confidence 999999 477888888776544
No 299
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.05 E-value=6.3e-10 Score=99.55 Aligned_cols=86 Identities=22% Similarity=0.328 Sum_probs=67.0
Q ss_pred CEEEE-cCceeeeecCceEEEEEEee-ccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 370 PQILI-RNRRVGVPIGRTATLECEVE-AFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 370 P~i~~-~p~~~~v~~G~~v~L~C~a~-g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
+.+.. .+..+.+.+|++++|.|.+. +.|.+.+.|++++...... .... ...+|.|.+++.+|+|.|
T Consensus 10 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~--~~~~----------~~~~L~i~~v~~~D~G~Y 77 (98)
T 1gl4_B 10 IMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS--RAMD----------FNGILTIRNVQPSDAGTY 77 (98)
T ss_dssp EEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCT--TEEE----------ETTEEEECSCCGGGCEEE
T ss_pred cEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCc--eeec----------CCCEEEEeCCChhhCEEE
Confidence 34444 45667899999999999998 6899999999875443221 1111 122499999999999999
Q ss_pred EEEEEeCCceeEEEEEEEee
Q psy12803 448 RCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~ 467 (902)
+|.|.|..|..+.++.|.|.
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~ 97 (98)
T 1gl4_B 78 VCTGSNMFAMDQGTATLHVQ 97 (98)
T ss_dssp EEEEECSSCEEEEEEEEEEC
T ss_pred EEEecCCCCccccEEEEEEe
Confidence 99999999999999998875
No 300
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=4.2e-10 Score=104.28 Aligned_cols=94 Identities=15% Similarity=0.128 Sum_probs=72.9
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
++.|...+.++.+.+|++++|.|.+.+.|.|.+.|++++..+.......+...... ..+|.|.+++.+|+|.|+
T Consensus 13 p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~------~~~L~I~~v~~~D~G~Y~ 86 (115)
T 2cr6_A 13 RVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGG------YHVLTLRQLALKDSGTIY 86 (115)
T ss_dssp CCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTT------BCCBEECSCCTTTCEEEE
T ss_pred CCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCC------EEEEEEcCCChhhCEEEE
Confidence 45788888889999999999999999999999999998887754332222111111 124999999999999999
Q ss_pred EEEEeCCceeEEEEEEEeecCCCC
Q psy12803 449 CISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 449 C~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
|. +|....++.|.|...+..
T Consensus 87 C~----~g~~~~~~~L~V~~~p~~ 106 (115)
T 2cr6_A 87 FE----AGDQRASAALRVTEKPSV 106 (115)
T ss_dssp EE----ETTEECCEEEEEECCSSC
T ss_pred EE----ECCeeEEEEEEEECCCce
Confidence 99 467778889999876654
No 301
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=1.2e-10 Score=105.20 Aligned_cols=92 Identities=20% Similarity=0.194 Sum_probs=71.5
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCc--eEEEeecCCCceeeEeEEEEeccCCCCCe
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGV--KYSISDVDKGSYQYIMQLNISNVNISDFD 445 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~--~~~~~~~~~~s~~~~stL~I~~V~~~DsG 445 (902)
.+|.|...+.++.+.+|++++|.|.+.+.| +.+.|++++..+...... ++.+..... ..+|.|.+++.+|+|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~-----~~~L~I~~~~~~D~G 80 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGK-----RHILIFSDVVQEDRG 80 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSS-----EEEEECSSCCGGGCS
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCC-----EEEEEECCCChhhCE
Confidence 467888888889999999999999999999 999999998877554422 334332221 346999999999999
Q ss_pred EEEEEEEeCCceeEEEEEEEeecC
Q psy12803 446 TYRCISKNEVDIAKGSLILFESNA 469 (902)
Q Consensus 446 ~YtC~A~N~~G~~~~s~~L~V~~~ 469 (902)
.|+|.|.| .+.++.|.|..+
T Consensus 81 ~Y~C~a~n----~~~~~~l~V~~~ 100 (101)
T 2edk_A 81 RYQVITNG----GQCEAELIVEEK 100 (101)
T ss_dssp BEEEECSS----CEECCBEEEECC
T ss_pred EEEEEEcC----CcEEEEEEEeCC
Confidence 99999988 445666777654
No 302
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.04 E-value=2.4e-10 Score=100.51 Aligned_cols=81 Identities=14% Similarity=0.172 Sum_probs=61.8
Q ss_pred CceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCC
Q psy12803 376 NRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEV 455 (902)
Q Consensus 376 p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~ 455 (902)
..++.+.+|+++.|.|.+.+ |.|.|.|++++..+.... ++.+..... ..+|.|.+++.+|+|.|+|.|.|
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~--~~~~~~~~~-----~~~L~I~~~~~~D~G~Y~C~a~n-- 72 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQG--RVQLEQAGA-----RQVLRVQGARSGDAGEYLCDAPQ-- 72 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCS--SEEEEECSS-----CEEEEESSCSSTTCEEEEEECTT--
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccc--cEEEeecCC-----eEEEEecCCCCcccEEEEEEECC--
Confidence 45678999999999999966 889999999887775433 333333322 23599999999999999999855
Q ss_pred ceeEEEEEEEeec
Q psy12803 456 DIAKGSLILFESN 468 (902)
Q Consensus 456 G~~~~s~~L~V~~ 468 (902)
.+.++.|.|.+
T Consensus 73 --~~~~a~l~V~e 83 (84)
T 2lu7_A 73 --DSRIFLVSVEE 83 (84)
T ss_dssp --TCEEEEEEECC
T ss_pred --EEEEEEEEEEC
Confidence 45677777764
No 303
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.04 E-value=2.7e-10 Score=113.78 Aligned_cols=95 Identities=22% Similarity=0.195 Sum_probs=76.7
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+..+.+.+|++++|.|.+.+.|.+.+.|++++..+......++.+..... .++|.|.+++.+|+|.|+
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~ 79 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDG-----RAKLTIPAVTKANSGRYS 79 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETT-----EEEEEESSCCGGGCEEEE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCC-----EEEEEECCCCcccCEEEE
Confidence 578888888899999999999999999999999999988776543322222221111 346999999999999999
Q ss_pred EEEEeCCceeEEEEEEEeec
Q psy12803 449 CISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 449 C~A~N~~G~~~~s~~L~V~~ 468 (902)
|.|.|..|....++.|.|..
T Consensus 80 C~~~n~~~~~~~~~~l~v~~ 99 (194)
T 2a38_A 80 LKATNGSGQATSTAELLVKA 99 (194)
T ss_dssp EEEEETTEEEEEEEEEEEEC
T ss_pred EEEEcCCceEeEEEEEEEcc
Confidence 99999999998888888874
No 304
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.04 E-value=7.1e-10 Score=113.50 Aligned_cols=99 Identities=19% Similarity=0.286 Sum_probs=79.7
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.| ..+.++.+.+|+.+.|.|.+.+.|.|.|.|++++..+......++.+..... .++|.|.+++.+|+|.|
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y 91 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPS-----ASYLEVTPDSENDFGNY 91 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETT-----EEEEEECCCSGGGCEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCC-----eeEEEEecCChhhCeEE
Confidence 46777 4666788999999999999999999999999988776544334444433221 35699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.|..|..+..+.|.|...|..
T Consensus 92 ~C~a~n~~g~~~~~~~l~v~~~P~~ 116 (215)
T 3mtr_A 92 NCTAVNRIGQESLEFILVQADTPSS 116 (215)
T ss_dssp EEEEECSSCEEEEEEEEEECCCCCC
T ss_pred EEEEEECCCceEEEEEEEECCCCCC
Confidence 9999999999999999999876554
No 305
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.03 E-value=4.7e-09 Score=106.29 Aligned_cols=143 Identities=16% Similarity=0.243 Sum_probs=93.5
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCc-eEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC--------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPS-IIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN-------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~-v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-------- 367 (902)
.++.+.|.+|+++.|.|.+.. +.|. +.|...-........ ......|.|.+|+. | |.|.|.+..
T Consensus 5 ~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~----~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~ 77 (185)
T 1iam_A 5 SPSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLP----GNNRKVYELSNVQE-D-SQPMCYSNCPDGQSTAK 77 (185)
T ss_dssp ESSEEEEETTEEEEEEEEECS-SSCSEEEEECSSCEEEECSS----SSSEEEEEEEEECS-C-BCCEEEEECSSCEEEEE
T ss_pred ECCCcEEeCCCCEEEEEEccC-CCCccceEEeeCCCccEecc----CCceeEEEEEecCc-C-CEEEEEEECCCCceEEE
Confidence 345577999999999999975 5555 677532111100000 01123699999983 4 999999976
Q ss_pred -------CCCEEEEcCceeeeecCceEEEEEEeecc-CCc--eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEe
Q psy12803 368 -------VPPQILIRNRRVGVPIGRTATLECEVEAF-PLS--VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 368 -------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P--~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
.|..+.+.+....+.+|+.++|.|.+.+. |.+ +|.|++++..+.... . .... ...+|++.
T Consensus 78 ~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~------~-~~~~---~~~tl~~~ 147 (185)
T 1iam_A 78 TFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREP------A-VGEP---AEVTTTVL 147 (185)
T ss_dssp CEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEE------C-CTTT---EEEEEEEE
T ss_pred EEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEccccc------C-CCcc---ccEEEEEe
Confidence 44455555555568999999999999984 654 589998877664321 0 1111 12357766
Q ss_pred ccCCCCCeEEEEEEEeCCc
Q psy12803 438 NVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G 456 (902)
....+|...|+|.|.|.++
T Consensus 148 ~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 148 VRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp CCSSCSSCEEEEEEEEECG
T ss_pred ceeccCCCeEEEEEEecCc
Confidence 5444444499999999887
No 306
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=3.8e-10 Score=104.77 Aligned_cols=70 Identities=24% Similarity=0.417 Sum_probs=58.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+.++.+.+|++++|.|.+.|.|.+.+.|+|++..+.. ...+.....+++|.|.+++.+|+|.|+|.|.|
T Consensus 14 ~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~-~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (118)
T 2eo9_A 14 GPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVST-QDSRIKQLENGVLQIRYAKLGDTGRYTCIAST 83 (118)
T ss_dssp CCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCT-TSTTEEEEETTEEEEESCCGGGCCCEEEEEEC
T ss_pred CCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcC-CCCeEEEccCCEEEEccCCcCCCEEEEEEEEc
Confidence 45668899999999999999999999999997765533 23344455677999999999999999999999
No 307
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.02 E-value=1.1e-09 Score=98.57 Aligned_cols=91 Identities=18% Similarity=0.085 Sum_probs=71.5
Q ss_pred CCCEEEEcCce-eeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 368 VPPQILIRNRR-VGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 368 ~~P~i~~~p~~-~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
.+|.|...+.+ +.+.+|+++.|.|.+. .|.+.+.|++++..+.... ++.+..... ..+|.|.+++.+|+|.
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~--~~~~~~~~~-----~~~L~I~~~~~~D~G~ 77 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPST--KYIFEHKGC-----QRILFINNCQMTDDSE 77 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBT--TEEEEEETT-----EEEEEEEEECTTTCCE
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCC--CEEEEecCC-----EEEEEEcCCCcCcCEE
Confidence 36788877776 6788999999999998 7999999999887775433 333332221 2369999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEeecCC
Q psy12803 447 YRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 447 YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
|+|.| |..+.++.|.|..+|
T Consensus 78 Y~C~a----g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 78 YYVTA----GDEKCSTELFVRSGP 97 (100)
T ss_dssp EEEEE----TTEEEEEEEEECCSC
T ss_pred EEEEE----CCceEEEEEEEecCC
Confidence 99999 778888999998765
No 308
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.02 E-value=2.5e-10 Score=101.95 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=51.7
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccC-CcEEEEeeeeecCceeEEeecCC
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVAS-STLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~-~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
+.+.+|+++.|.|.+.+ |.+.++|+|++..+............. .+|.|.+++.+|+|.|+|.|.|.
T Consensus 16 v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 16 VHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp EECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC
T ss_pred EEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce
Confidence 45578999999999976 889999999887765443322222222 37999999999999999999873
No 309
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.01 E-value=3.2e-10 Score=102.67 Aligned_cols=93 Identities=11% Similarity=0.195 Sum_probs=69.3
Q ss_pred CCCEEEEcCce---eeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCC
Q psy12803 368 VPPQILIRNRR---VGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDF 444 (902)
Q Consensus 368 ~~P~i~~~p~~---~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~Ds 444 (902)
.+|.+...+.. +.+.+|++++|.|.+.+.|.+ +.|++++..+.......+. .... ..+|.|.+++.+|+
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~--~~~~-----~~~L~I~~~~~~D~ 77 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVK--MDGR-----KHRLILPEAKVQDS 77 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEE--EETT-----EEEEEESSCCTTTC
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEE--eCCC-----EEEEEECCCChhhC
Confidence 35666666665 788999999999999999999 9999988766543333322 2111 34699999999999
Q ss_pred eEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 445 DTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 445 G~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
|.|+|.|.|..+ .+.|.|..+|.+
T Consensus 78 G~Y~C~a~n~~~----~~~l~V~~~P~p 101 (104)
T 2e6p_A 78 GEFECRTEGVSA----FFGVTVQDPSGP 101 (104)
T ss_dssp EEEEEECSSCCC----CEEEEEECCCCS
T ss_pred EEEEEEECCceE----EEEEEEcCCCCC
Confidence 999999999744 567777765543
No 310
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.01 E-value=3.6e-10 Score=102.88 Aligned_cols=91 Identities=19% Similarity=0.169 Sum_probs=70.2
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+.++.+.+|+++.|.|.+.+.|.+ +.|++++..+....... +..... ..+|.|.+++.+|+|.|
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~--~~~~~~-----~~~L~I~~v~~~D~G~Y 78 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRIT--ISHVGR-----FHKLVIDDVRPEDEGDY 78 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCE--EEEETT-----EEEEEESSCCTTTCSCE
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEE--EEEeCC-----EEEEEECCCCcCCCEEE
Confidence 46888888899999999999999999999988 99999887775433333 222211 24599999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeec
Q psy12803 448 RCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~ 468 (902)
+|.|.|. ..+.++.|.|..
T Consensus 79 ~C~a~n~--~~~~~~~l~V~~ 97 (106)
T 2dlt_A 79 TFVPDGY--ALSLSAKLNFLE 97 (106)
T ss_dssp EEEEETS--CCCCCBCEEEEC
T ss_pred EEEEccC--CceEEEEEEEEE
Confidence 9999998 444555555553
No 311
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.99 E-value=2.3e-10 Score=102.27 Aligned_cols=74 Identities=16% Similarity=0.139 Sum_probs=57.9
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcccee--ccCCcEEEEeeeeecCceeEEeecCC
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA--VASSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~--~~~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
+..+.++.+.+|++++|.|.+.|.|.+.+.|+|++..+.......... ....+|.|.+++.+|+|.|+|.|.|.
T Consensus 9 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 84 (99)
T 1g1c_A 9 FERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINI 84 (99)
T ss_dssp EECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEEC
Confidence 345667889999999999999999999999999876654333222211 22237999999999999999999983
No 312
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.99 E-value=4.2e-10 Score=100.50 Aligned_cols=86 Identities=19% Similarity=0.222 Sum_probs=61.7
Q ss_pred CCEEEEcCcee--eeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 369 PPQILIRNRRV--GVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 369 ~P~i~~~p~~~--~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
|+.|..+..++ .+.+|+++.|.|.+.+ |.|.+.|++++..+......+ +...+. ..+|.|.+++.+|+|.
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~--i~~~~~-----~~~L~I~~v~~~D~G~ 75 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVV--LENEGP-----HRRLVLPATQPSDGGE 75 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCE--EEEETT-----EEEEEESSCCGGGCSE
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeee--EEecCC-----eEEEEeCCCChhhcEE
Confidence 45555544443 4568999999999966 888999999988876544333 332221 2459999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEe
Q psy12803 447 YRCISKNEVDIAKGSLILFE 466 (902)
Q Consensus 447 YtC~A~N~~G~~~~s~~L~V 466 (902)
|+|.|.|. +.++.|.|
T Consensus 76 Y~C~a~n~----~~~~~ltV 91 (91)
T 2lvc_A 76 FQCVAGDE----CAYFTVTI 91 (91)
T ss_dssp EEEECSSC----EEEEEEEC
T ss_pred EEEEEcce----EEEEEEEC
Confidence 99999764 55666654
No 313
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.99 E-value=7.9e-10 Score=99.19 Aligned_cols=71 Identities=21% Similarity=0.354 Sum_probs=59.2
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
..+..+.+.+|++++|.|.+.+.|.+.+.|+|++..+.. ...+.....+++|.|.+++.+|+|.|+|.|.|
T Consensus 13 ~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 83 (100)
T 2edj_A 13 QGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPG-RDPRATIQEQGTLQIKNLRISDTGTYTCVATS 83 (100)
T ss_dssp ECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESS-SCSSCEECTTCCEEEESCCTTTCCEEEEEEEC
T ss_pred eCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCC-CCCCEEEcCCCEEEEccCCcccCEEEEEEEEc
Confidence 355678899999999999999999999999998766542 23344455677999999999999999999998
No 314
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.98 E-value=1.8e-09 Score=103.03 Aligned_cols=89 Identities=17% Similarity=0.162 Sum_probs=67.5
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecC--------CceEEEeecCCCceeeEeEEEEecc
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHD--------GVKYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~--------~~~~~~~~~~~~s~~~~stL~I~~V 439 (902)
.+|.|...+..+.+.+|++++|.|.+.+.|.|.+.|++++..+.... ..++.+..... ....++|.|.++
T Consensus 20 ~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v 97 (137)
T 3qr2_A 20 HMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYH--QHAASTISIDTL 97 (137)
T ss_dssp -CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEES--SSEEEEEEECSC
T ss_pred CCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccc--cccceEEEECCC
Confidence 68999999999999999999999999999999999999776542210 11122111100 012457999999
Q ss_pred CCCCCeEEEEEEEeCCcee
Q psy12803 440 NISDFDTYRCISKNEVDIA 458 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~G~~ 458 (902)
+.+|+|.|+|.|.|..|..
T Consensus 98 ~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 98 VEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp CGGGCEEEEEEEECCTTSS
T ss_pred CcccCEEEEEEEEecCCcc
Confidence 9999999999999999976
No 315
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.98 E-value=3e-09 Score=111.43 Aligned_cols=150 Identities=17% Similarity=0.221 Sum_probs=92.4
Q ss_pred cCCcEEEEcCCeEEEEEecCCCC--CCceEEecCCC--cc--ccc--------CCccceec-----cCCcEEEEeeeeec
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHP--KPSIIWKTSEN--KP--ITL--------GSWKDSAV-----ASSTLNFTRINRIN 357 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~~~--~~--~~~--------~~~~~~~~-----~~~sL~I~~Vt~~D 357 (902)
.+..+.+.+|++|+|.|.+.+.+ ...+.|+|... .+ +.. ...+.... ...+|.|.+++.+|
T Consensus 7 ~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 86 (229)
T 1hxm_A 7 EHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERD 86 (229)
T ss_dssp SCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGG
T ss_pred CCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhH
Confidence 45668899999999999998644 46799998532 11 110 01122221 12379999999999
Q ss_pred CceeEEeecCCC-------C-------EEEEc-------CceeeeecCceEEEEEEeecc-CCc-eEEEEecCCeeeecC
Q psy12803 358 MGAYMCLADNVP-------P-------QILIR-------NRRVGVPIGRTATLECEVEAF-PLS-VRYWEFIDGTLIEHD 414 (902)
Q Consensus 358 sG~YtC~A~N~~-------P-------~i~~~-------p~~~~v~~G~~v~L~C~a~g~-P~P-~v~W~k~~~~l~~~~ 414 (902)
+|.|.|.+.+.. . .+.+. +..+.+.. ..+.|.|.+.+. |.+ .|.|+++ ..+...
T Consensus 87 sg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~~~-~~~~L~C~~~g~~P~~i~v~W~~~-~~~~~~- 163 (229)
T 1hxm_A 87 EGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVFVMK-NGTNVACLVKEFYPKDIRINLVSS-KKITEF- 163 (229)
T ss_dssp CEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEEEEE-ETTEEEEEEESCBSSCCEEEEECS-SEEEEC-
T ss_pred CeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEEEcC-CCCeEEEEEEEEeCCCEEEEEecC-CEEecC-
Confidence 999999997631 1 12221 11222222 346899999976 554 8999988 665432
Q ss_pred CceEEEeecCCCceeeEeEEEEecc-CCCCCeEEEEEEEeCCce
Q psy12803 415 GVKYSISDVDKGSYQYIMQLNISNV-NISDFDTYRCISKNEVDI 457 (902)
Q Consensus 415 ~~~~~~~~~~~~s~~~~stL~I~~V-~~~DsG~YtC~A~N~~G~ 457 (902)
..... ...++.+. +..+ ..+|.+.|+|.|.|..+.
T Consensus 164 ~~~~~--~~~dg~y~------~~~~~~~~~~~~ytC~V~h~~~~ 199 (229)
T 1hxm_A 164 DPAIV--ISPSGKYN------AVKLGKYEDSNSVTCSVQHDNKT 199 (229)
T ss_dssp CCEEE--ECTTSSEE------EEEEEEETTTTTCEEEEEETTEE
T ss_pred ccceE--ECCCCcEE------EEECcccCCCCcEEEEEEeCCCC
Confidence 22221 23344432 2222 237889999999998743
No 316
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.98 E-value=1.1e-09 Score=97.35 Aligned_cols=84 Identities=18% Similarity=0.212 Sum_probs=66.3
Q ss_pred cCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeC
Q psy12803 375 RNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNE 454 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~ 454 (902)
.+..+.+.+|+++.|.|.+.+ .|.+.|++++..+... .++.+. . .+|.|.+++.+|+|.|+|.|.|.
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~--~~~~~~---~------~~L~i~~~~~~D~G~Y~C~a~n~ 73 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPN--NRTVLI---G------EYLQIKGATPRDSGLYACTAART 73 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCC--SSEEEE---T------TEEEECSCCGGGCEEEEEEEECS
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCC--ceEEEe---C------CEEEECcCCcccCEEEEEEEccC
Confidence 566778999999999999987 4799999887666432 233322 1 24999999999999999999999
Q ss_pred CceeEEEEEEEeecCCC
Q psy12803 455 VDIAKGSLILFESNAKT 471 (902)
Q Consensus 455 ~G~~~~s~~L~V~~~p~ 471 (902)
.|..+.++.|.|.++..
T Consensus 74 ~g~~~~~~~l~V~~~~~ 90 (95)
T 4hwu_A 74 VDSETWIFMVNVTDAAE 90 (95)
T ss_dssp SCEEEEEEEEEECCC--
T ss_pred CCcEEEEEEEEEeCCcc
Confidence 99999999999986543
No 317
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.97 E-value=1.8e-09 Score=101.51 Aligned_cols=94 Identities=18% Similarity=0.285 Sum_probs=70.6
Q ss_pred EEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeec------CCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 373 LIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEH------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 373 ~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
...+..+.+.+|++++|.|.+.+.|.+.+.|++.++.+... ...++.+..... ...+|.|.+++.+|+|.
T Consensus 5 ~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~L~I~~v~~~DsG~ 80 (124)
T 3rbg_A 5 TNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSA----NQLSITVPNVTLQDEGV 80 (124)
T ss_dssp CCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEET----TEEEEEESSCCGGGCEE
T ss_pred cCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCC----CEEEEEECCCChHHCEE
Confidence 34556788999999999999999999999999777654321 122222221111 13569999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 447 YRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 447 YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
|+|.|.|. |.....+.|.|..+|.
T Consensus 81 Y~C~a~n~-g~~~~~~~l~V~~~P~ 104 (124)
T 3rbg_A 81 YKCLHYSD-SVSTKEVKVIVLATMK 104 (124)
T ss_dssp EEEEEESS-SEEEEEEEEEEECC--
T ss_pred EEEEEEcC-CCCcEEEEEEEEeCCC
Confidence 99999999 9999999999987654
No 318
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.96 E-value=4.3e-10 Score=98.90 Aligned_cols=70 Identities=16% Similarity=0.291 Sum_probs=54.9
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceecc-CCcEEEEeeeeecCceeEEeecCC
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVA-SSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~-~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
..++.+.+|+++.|.|.+.+ |.|.|+|+|++..+............ ..+|.|.+++.+|+|.|+|.|.|.
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 73 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD 73 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE
Confidence 35688999999999999977 89999999987766543332222222 237999999999999999999873
No 319
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.96 E-value=1.6e-09 Score=107.97 Aligned_cols=98 Identities=18% Similarity=0.173 Sum_probs=74.0
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccC-CceEEEEe-cCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFP-LSVRYWEF-IDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P-~P~v~W~k-~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
++.+...+.++.+.+|+++.|.|.+.+.| .+.+.|++ ++..+.. ...++.+..... ...+|.|.+++.+|+|.
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~-~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~ 76 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSP-NQQRISVVWNDD----DSSTLTIYNANIDDAGI 76 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECC-BSSSEEEEEEET----TEEEEEECSCCGGGCEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccC-CCCeEEEEECCC----CceEEEEccCCcccCEE
Confidence 46677888889999999999999999987 88999998 5554432 333333322111 13469999999999999
Q ss_pred EEEEEEeCC-ceeEEEEEEEeecCCC
Q psy12803 447 YRCISKNEV-DIAKGSLILFESNAKT 471 (902)
Q Consensus 447 YtC~A~N~~-G~~~~s~~L~V~~~p~ 471 (902)
|+|.|.|.. +..+..+.|.|..++.
T Consensus 77 Y~C~~~~~~~~~~~~~~~l~v~~~p~ 102 (191)
T 1epf_A 77 YKCVVTAEDGTQSEATVNVKIFQKLM 102 (191)
T ss_dssp EEEEEEETTTEEEEEEEEEEEECCSE
T ss_pred EEEEEEcCCCcceEEEEEEEeecCce
Confidence 999999998 5667888888876543
No 320
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.96 E-value=6.8e-10 Score=110.18 Aligned_cols=94 Identities=18% Similarity=0.258 Sum_probs=70.2
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+......++.... .. +|.|.+++.+|+|.|+
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~------~L~i~~~~~~d~G~Y~ 73 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA--NN------NLQILNINKSDEGIYR 73 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECT--TS------CEEETTCCGGGCEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEec--CC------CEEEeeCCHhHCcEEE
Confidence 678888888999999999999999999999999999988776554444444332 22 2999999999999999
Q ss_pred EEEEeCCcee--EEEEEEEeecCC
Q psy12803 449 CISKNEVDIA--KGSLILFESNAK 470 (902)
Q Consensus 449 C~A~N~~G~~--~~s~~L~V~~~p 470 (902)
|.|.|..+.. ...+.|.|..++
T Consensus 74 C~~~~~~~~~~~~~~~~l~v~~~p 97 (189)
T 2v5t_A 74 CEGRVEARGEIDFRDIIVIVNVPP 97 (189)
T ss_dssp EEEEETTTTEEEEEEEEEEEEEEE
T ss_pred EEEEEcCCCceEEEEEEEEecCCC
Confidence 9999987543 355666665544
No 321
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.96 E-value=6.8e-10 Score=101.29 Aligned_cols=94 Identities=14% Similarity=0.136 Sum_probs=71.7
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCC-ceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPL-SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~-P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
.++.|...+.++.+.+|++++|.|.+.+.|. +.+.|++++..+..... +.+..... ..+|.|.+++.+|+|.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r--~~~~~~~~-----~~~L~I~~v~~~D~G~ 79 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSR--FQATRQGR-----KYILVVREAAPSDAGE 79 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSS--CEEEEETT-----EEEEEECSCCTTTCSC
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCC--EEEEEcCC-----EEEEEECCCCHHHCEE
Confidence 3556777788899999999999999999875 48999998887754333 33322221 2459999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 447 YRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 447 YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
|+|.|.| ...++.|.|..+|..
T Consensus 80 Y~C~a~~----~~~~a~L~V~~~p~~ 101 (104)
T 2eny_A 80 VVFSVRG----LTSKASLIVRERSGP 101 (104)
T ss_dssp EEEEETT----EEEEECEEEECCCSS
T ss_pred EEEEECC----eeEEEEEEEeCCCcC
Confidence 9999854 568888888876643
No 322
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.96 E-value=3.3e-10 Score=100.45 Aligned_cols=69 Identities=20% Similarity=0.358 Sum_probs=54.6
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCC--CcccccCCccceeccCCcEEEEeeeeecCceeEEeecC
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSE--NKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~--~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+.++.+.+|+++.|.|.+.|.|.|.++|+|++ ..+.. ...........+|.|.+++.+|+|.|+|.|.|
T Consensus 9 ~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 79 (93)
T 1wit_A 9 SRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAP-ELLVDAKSSTTSIFFPSAKRADSGNYKLKVKN 79 (93)
T ss_dssp CCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCST-TSEEEEETTEEEEECTTBCGGGCEEEEEEEEE
T ss_pred CCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCC-cEEEEecCCEEEEEECCCChhcCEEEEEEEEc
Confidence 45688999999999999999999999999988 44322 11111122335799999999999999999998
No 323
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.95 E-value=1.4e-09 Score=101.16 Aligned_cols=83 Identities=24% Similarity=0.394 Sum_probs=62.2
Q ss_pred CcccccCCcccCCceeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceecc--CC--cEEEEeeee
Q psy12803 280 TSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVA--SS--TLNFTRINR 355 (902)
Q Consensus 280 ~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~--~~--sL~I~~Vt~ 355 (902)
......+|.|. ..+.++.+.+|++++|.|.+.|.|.+.|.|+|++..+..... +..... .+ +|.|.+++.
T Consensus 9 ~~~~~~~p~f~-----~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~-~~~~~~~~~~~~~L~I~~v~~ 82 (116)
T 2kkq_A 9 SHEHKRAPMFI-----YKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTD-RISLYQDNTGRVTLLIKDVNK 82 (116)
T ss_dssp CCCCCBCCCBS-----SCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBT-TEEEEECTTCEEEEEEEEECG
T ss_pred ccCCCCCCeEE-----eCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCC-eEEEEeCCCCeEEEEECCCCc
Confidence 34455556553 345678999999999999999999999999998765543222 222222 22 799999999
Q ss_pred ecCceeEEeecCC
Q psy12803 356 INMGAYMCLADNV 368 (902)
Q Consensus 356 ~DsG~YtC~A~N~ 368 (902)
+|+|.|+|.|.|.
T Consensus 83 ~D~G~Y~C~a~N~ 95 (116)
T 2kkq_A 83 KDAGWYTVSAVNE 95 (116)
T ss_dssp GGCEEEEEEEEET
T ss_pred ccCEEEEEEEEcC
Confidence 9999999999883
No 324
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.95 E-value=4.3e-10 Score=100.71 Aligned_cols=72 Identities=22% Similarity=0.380 Sum_probs=57.6
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCC--cEEEEeeeeecCceeEEeecCC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASS--TLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~--sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
.+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+............++ +|.|.+++.+|+|.|+|.|.|.
T Consensus 11 ~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 84 (100)
T 2kdg_A 11 VPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNR 84 (100)
T ss_dssp CCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcC
Confidence 45668899999999999999999999999998766544333333333333 8999999999999999999883
No 325
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.94 E-value=2.1e-09 Score=95.85 Aligned_cols=87 Identities=18% Similarity=0.195 Sum_probs=67.3
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
.+.|...+.++.+.+|+++.|.|.+ +.|.+.+.|++++..+..... +.+..... ..+|.|.+++.+|+|.|+
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~--~~~~~~~~-----~~~L~I~~v~~~D~G~Y~ 79 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNK--YGLATEGT-----RHTLTVREVGPADQGSYA 79 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTT--CEEEEETT-----EEEEEESSCCTTCCSEEE
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCc--EEEEEcCC-----EEEEEEcCCCcccCEEEE
Confidence 3556667778899999999999999 889999999998887754333 23322221 245999999999999999
Q ss_pred EEEEeCCceeEEEEEEEee
Q psy12803 449 CISKNEVDIAKGSLILFES 467 (902)
Q Consensus 449 C~A~N~~G~~~~s~~L~V~ 467 (902)
|.| |....++.|.|.
T Consensus 80 C~a----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 80 VIA----GSSKVKFDLKVI 94 (95)
T ss_dssp EEE----TTEEEEEEEEEE
T ss_pred EEE----CCceEEEEEEEe
Confidence 999 567777888775
No 326
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=5.2e-10 Score=99.91 Aligned_cols=84 Identities=21% Similarity=0.230 Sum_probs=66.2
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+....+.+|++++|.|.+.+.|.+.+.|++++..+.... . .+|.|.+++.+|+|.|
T Consensus 9 ~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~----------~------~~L~i~~v~~~d~G~Y 72 (96)
T 2ens_A 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPP----------S------PVLILPEIGPQDQGTY 72 (96)
T ss_dssp CSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCC----------C------SEEEEESCCTTTCEEE
T ss_pred CCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCC----------C------CEEEECCCCcccCEEE
Confidence 35677777777889999999999999999999999999876653221 1 2499999999999999
Q ss_pred EEEEEeCCcee--EEEEEEEee
Q psy12803 448 RCISKNEVDIA--KGSLILFES 467 (902)
Q Consensus 448 tC~A~N~~G~~--~~s~~L~V~ 467 (902)
+|.|.|..+.. +..+.|.|.
T Consensus 73 ~C~a~n~~~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 73 SCVATHSSHGPQESRAVSISII 94 (96)
T ss_dssp ECEECCSSCCCEECCCEEEEEC
T ss_pred EEEEEeCCCCcEEEEEEEEEEe
Confidence 99999976654 345555554
No 327
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.94 E-value=1.1e-09 Score=98.15 Aligned_cols=72 Identities=13% Similarity=0.001 Sum_probs=55.4
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceecc-CCcEEEEeeeeecCceeEEeecC
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVA-SSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~-~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+..+.++.+.+|++++|.|.+.+ +.+.++|+|++..+............ ..+|.|.+++.+|+|.|+|.|.|
T Consensus 9 ~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 9 EKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp EECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred eccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 44567789999999999999987 55889999987665443322222111 23799999999999999999988
No 328
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.92 E-value=1.2e-09 Score=111.98 Aligned_cols=98 Identities=17% Similarity=0.196 Sum_probs=75.1
Q ss_pred CCCEEEEcC----ceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCC
Q psy12803 368 VPPQILIRN----RRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISD 443 (902)
Q Consensus 368 ~~P~i~~~p----~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~D 443 (902)
.+|.|...+ ..+.+.+|+++.|.|.+.+.|.+.+.|++++..+............... .+|.|.+++.+|
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~------~~L~i~~~~~~d 87 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQH------WSLIMESVVPSD 87 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGG------TEEEECSCCGGG
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCc------ceEEEecCCccc
Confidence 356666555 6778999999999999999999999999987766433222111111111 249999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 444 FDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 444 sG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
+|.|+|.|.|..|.....+.|.|...+.
T Consensus 88 ~G~Y~C~~~n~~~~~~~~~~l~V~~~~~ 115 (231)
T 3ojm_B 88 KGNYTCVVENEYGSINHTYHLDVVERSR 115 (231)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred CEEEEEEEecccCcccccEEEEEEcCCC
Confidence 9999999999999999999999887544
No 329
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.92 E-value=1.7e-09 Score=113.58 Aligned_cols=110 Identities=16% Similarity=0.183 Sum_probs=63.9
Q ss_pred eeeecCceeEEeecC-----------CCCEEEEcCceeeeecCceEEEEEEeeccC-----CceEEEEecC--Ceee---
Q psy12803 353 INRINMGAYMCLADN-----------VPPQILIRNRRVGVPIGRTATLECEVEAFP-----LSVRYWEFID--GTLI--- 411 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N-----------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P-----~P~v~W~k~~--~~l~--- 411 (902)
|+.+|+|.|+|.|.. .++.+...+..+.+.+|++++|.|.+.+.| .+.|.|++++ ..+.
T Consensus 11 v~~~dsg~Y~C~a~g~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~ 90 (254)
T 2c1o_A 11 VRPGTSVKLSCKASGYSFTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLI 90 (254)
T ss_dssp ---------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEE
T ss_pred ecCCccEEEEEcCchhhhhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEE
Confidence 788999999999986 345666667788999999999999999998 4899999754 2110
Q ss_pred -------ecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeE-EEEEEEee
Q psy12803 412 -------EHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAK-GSLILFES 467 (902)
Q Consensus 412 -------~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~-~s~~L~V~ 467 (902)
.....++.+.... ...+|.|.+++.+|+|.|+|.|.|..+... ....|.|.
T Consensus 91 ~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~ 149 (254)
T 2c1o_A 91 YLVSKLDSGDPDRFTGSGSG-----TDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELK 149 (254)
T ss_dssp ETTTEECTTCCTTEEEEEET-----TEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEEC
T ss_pred EeccccCCCccceEEEecCC-----CEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEEC
Confidence 0011223322211 123699999999999999999999866432 22345554
No 330
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.92 E-value=5.2e-09 Score=96.22 Aligned_cols=92 Identities=21% Similarity=0.241 Sum_probs=72.3
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+.++.+.+|+++.|.|.+.+. |.+.|++++..+... .++.+..... ..+|.|.+++.+|+|.|
T Consensus 18 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~--~~~~~~~~~~-----~~~L~I~~v~~~D~G~Y 88 (113)
T 2edh_A 18 LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDG--DRHSLRQDGA-----RCELQIRGLVAEDAGEY 88 (113)
T ss_dssp SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCS--SSEEEEEETT-----EEEEEECSCCSTTCEEE
T ss_pred CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCC--CcEEEEECCC-----EEEEEECCCChhhCEEE
Confidence 45688888888899999999999999775 789999988776443 3344332221 34599999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.| +....++.|.|...|..
T Consensus 89 ~C~a----~~~~~~~~l~V~~~p~~ 109 (113)
T 2edh_A 89 LCMC----GKERTSAMLTVRAMPSG 109 (113)
T ss_dssp EEEE----TTEEEEEEEEECCCCCS
T ss_pred EEEe----CCCCEEEEEEEeCCCCC
Confidence 9999 77888899999876654
No 331
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=98.92 E-value=4.1e-09 Score=111.07 Aligned_cols=141 Identities=15% Similarity=0.190 Sum_probs=100.3
Q ss_pred EEEEcCCeEEEEEecCC-CC---CCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC---------
Q psy12803 301 IVVREGDNVRLRCVATG-HP---KPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN--------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G-~P---~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N--------- 367 (902)
..+..|+.++|.|.+.+ .| ..+++|+|++..+. .....|.|..++..|+|.|+|++.+
T Consensus 12 ~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~Is---------GaT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs 82 (304)
T 3shs_A 12 RCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHE---------NNTATLTVADATSENAGSYKVTVQDTDTMTSVES 82 (304)
T ss_dssp SSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECS---------CCSSEEEESSCCGGGCEEEEEEEEETTTCCEEEC
T ss_pred ccccCCCCEEEEEEecCCCCCCCCceEEEEECCcccc---------CCcceEEeeeccccCCeEEEEEEEECCCCeeeee
Confidence 44678999999999875 66 44799999764421 1245899999999999999999987
Q ss_pred -------CCCEEEE-cCceeeeecCceEEEEEEe--ec-cC-----CceEEEEecCCeeeecCCceEEEeecCCCceeeE
Q psy12803 368 -------VPPQILI-RNRRVGVPIGRTATLECEV--EA-FP-----LSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYI 431 (902)
Q Consensus 368 -------~~P~i~~-~p~~~~v~~G~~v~L~C~a--~g-~P-----~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~ 431 (902)
..+.+.. .+....+..+..+.|.+.+ .+ .| ..+++|++++..+....
T Consensus 83 ~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgAq----------------- 145 (304)
T 3shs_A 83 EVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQ----------------- 145 (304)
T ss_dssp CCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESSS-----------------
T ss_pred eEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCcc-----------------
Confidence 1112222 3444455667889999987 43 34 46999999876552110
Q ss_pred eEEEEeccCCCCCeEEEEEEEeCCce--eEEEEEEEeec
Q psy12803 432 MQLNISNVNISDFDTYRCISKNEVDI--AKGSLILFESN 468 (902)
Q Consensus 432 stL~I~~V~~~DsG~YtC~A~N~~G~--~~~s~~L~V~~ 468 (902)
.|++...+..++|.|+|.+.|..+. ++.++.+.+..
T Consensus 146 -~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~ 183 (304)
T 3shs_A 146 -DITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLAT 183 (304)
T ss_dssp -EEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECE
T ss_pred -ccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEc
Confidence 2788888899999999999999763 35666665543
No 332
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.91 E-value=9.2e-10 Score=101.48 Aligned_cols=71 Identities=21% Similarity=0.233 Sum_probs=56.7
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec-cCCcEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV-ASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~-~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+........... ...+|.|.+++.+|+|.|+|.|.|
T Consensus 13 ~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 13 FPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 45678899999999999999999999999998876543322111111 135899999999999999999998
No 333
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.91 E-value=1.9e-10 Score=125.06 Aligned_cols=160 Identities=13% Similarity=0.093 Sum_probs=43.8
Q ss_pred EEEEcCCeEEEEEecCCC-CCC--ceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCC----CC-EE
Q psy12803 301 IVVREGDNVRLRCVATGH-PKP--SIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNV----PP-QI 372 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~-P~p--~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~----~P-~i 372 (902)
..+.+|+.++|.|.+.+. |.. +|+|+|++..+..... .......+|.|.....+|.+.|+|+|.|. .. .+
T Consensus 96 ~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~--~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~ 173 (291)
T 1mq8_A 96 SWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA--VGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELF 173 (291)
T ss_dssp SBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC--CBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEE
T ss_pred ccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC--CCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccc
Confidence 347899999999999984 544 5899998766533221 01111235665555555666999999971 10 10
Q ss_pred E---------E--cC-c------eeeeecCceEEEEEEeeccCCc---eEEEEecCCeeeecCCceEEEeecCCCceeeE
Q psy12803 373 L---------I--RN-R------RVGVPIGRTATLECEVEAFPLS---VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYI 431 (902)
Q Consensus 373 ~---------~--~p-~------~~~v~~G~~v~L~C~a~g~P~P---~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~ 431 (902)
. + .| . ...+.+|+.++|+|.+.|.|++ .|.|++++..+..... ..++ . ..
T Consensus 174 ~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~~------~~g~-~--~~ 244 (291)
T 1mq8_A 174 ENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVT------YGND-S--FS 244 (291)
T ss_dssp EECCCCEECBC---------------------------------------------------------------------
T ss_pred cccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCceee------ecCC-e--EE
Confidence 0 0 00 0 1246789999999999998554 5889887776643110 0111 1 11
Q ss_pred eEEEEeccCCCC--CeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 432 MQLNISNVNISD--FDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 432 stL~I~~V~~~D--sG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+++.+ +++++| .+.|+|.|.|.....+....|.|.+++.+
T Consensus 245 ~~~~~-~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~~ 286 (291)
T 1mq8_A 245 AKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAP 286 (291)
T ss_dssp -------------------------------------------
T ss_pred EEEec-ceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCCc
Confidence 22222 123434 56777888886655677888888776544
No 334
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=7e-10 Score=101.23 Aligned_cols=73 Identities=22% Similarity=0.433 Sum_probs=58.2
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccC--CcEEEEeeeeecCceeEEeecCC
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVAS--STLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~--~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
..+.++.+.+|++++|.|.+.+.|.+.|.|+|++..+............+ .+|.|.+++.+|+|.|+|.|.|.
T Consensus 14 ~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 88 (110)
T 2dm3_A 14 QAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNR 88 (110)
T ss_dssp ECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECS
T ss_pred eCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECC
Confidence 34567889999999999999999999999999877654433322223333 38999999999999999999983
No 335
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.91 E-value=2.2e-09 Score=96.85 Aligned_cols=93 Identities=20% Similarity=0.213 Sum_probs=72.5
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+.++.+.+|++++|.|. .+.|.+.+.|++++..+.... ++.+.... ...+|.|.+++.+|+|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~~--~~~~~~~~-----~~~~L~I~~v~~~D~G~Y 78 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASG--KHQPSQEG-----LTLRLTISALEKADSDTY 78 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSSS--SEEEEEET-----TEEEEEEESCCTTTCSEE
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCCC--eEEEEeCC-----CEEEEEECCCCcccCEEE
Confidence 3567777788889999999999999 488999999999887765432 33333222 123599999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|. .|..+.++.|.|...+.+
T Consensus 79 ~C~----~g~~~~~~~l~V~~~p~~ 99 (103)
T 2dku_A 79 TCD----IGQAQSRAQLLVQGRRSG 99 (103)
T ss_dssp EEE----CSSCBCCEEEEEECSCCC
T ss_pred EEE----eCCceEEEEEEEeCccCC
Confidence 998 677778888998876654
No 336
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.91 E-value=7.5e-10 Score=123.77 Aligned_cols=100 Identities=18% Similarity=0.262 Sum_probs=60.0
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCC--ccceeccCCcEEEEeeeeecCceeEEeecCCCC-----
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGS--WKDSAVASSTLNFTRINRINMGAYMCLADNVPP----- 370 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~--~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~~P----- 370 (902)
+..+++.+|++++|.|.+.| |.|.|+|+++++.+..... .+... .+++|+|.+|+.+|+|.|+|+|.|..-
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~ 330 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNGDLFFKKVQVEDGGVYTCYAMGETFNETLS 330 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETTEEEESSCCTTSCEEEEEEEECSSCEEEEE
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecCeEEEeecCcccCEEEEEEEecCCCccEEE
Confidence 45678999999999999999 9999999998776544321 12333 678999999999999999999999321
Q ss_pred -EEEEcCceeeeecCceEEEEEEeeccCCceEE
Q psy12803 371 -QILIRNRRVGVPIGRTATLECEVEAFPLSVRY 402 (902)
Q Consensus 371 -~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~ 402 (902)
.+.+.. ...+|+.++|.|.+.|.|.|+|+
T Consensus 331 ~~l~V~~---~~~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 331 VELKVYN---FTLHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp EEEEEES---SCCC-------------------
T ss_pred EEEEEEe---eeccCCceEEEEEeCCCCCCccc
Confidence 111111 23678999999999999999864
No 337
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.91 E-value=4.3e-09 Score=105.14 Aligned_cols=89 Identities=18% Similarity=0.230 Sum_probs=69.4
Q ss_pred CCEEEEcCceeeeec-CceEEEEEEeeccCC--ceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCe
Q psy12803 369 PPQILIRNRRVGVPI-GRTATLECEVEAFPL--SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFD 445 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~-G~~v~L~C~a~g~P~--P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG 445 (902)
+|.|...+. ..+.+ |+++.|.|.+.+.|. +.+.|++++..+... ... .....|.|.+++.+|+|
T Consensus 3 ~P~i~~~~~-~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~-~~~-----------~~~~~L~i~~~~~~d~G 69 (190)
T 2wv3_A 3 EPRIVTSEE-VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTAT-RKN-----------ASNMEYRINKPRAEDSG 69 (190)
T ss_dssp CCEEEECCC-EECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTC-CBC-----------CSEEEEEESSCCGGGCE
T ss_pred CCcccccce-EEEccCCceEEEEEEeccCCCCceEEEEEECCEECccc-ceE-----------eccEEEEEecCCcccCE
Confidence 577776444 45556 999999999999987 899999887655321 110 01346999999999999
Q ss_pred EEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 446 TYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 446 ~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.|+|.|.|. +....++.|.|..+|.
T Consensus 70 ~Y~C~~~n~-~~~~~~~~l~V~~~p~ 94 (190)
T 2wv3_A 70 EYHCVYHFV-SAPKANATIEVKAAPD 94 (190)
T ss_dssp EEEEEEEET-TEEEEEEEEEEECCCE
T ss_pred EEEEEEEeC-CcccccEEEEEecCCc
Confidence 999999999 8889999999987654
No 338
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.90 E-value=7.6e-10 Score=99.11 Aligned_cols=81 Identities=23% Similarity=0.406 Sum_probs=61.8
Q ss_pred cccccCCcccCCceeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCce
Q psy12803 281 SQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGA 360 (902)
Q Consensus 281 ~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~ 360 (902)
..+..+|.+. ..+.++.+.+|++++|.|.+.+.|.|.+.|+|++..+... .........+|.|.+++.+|+|.
T Consensus 6 ~~~~~~P~~~-----~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~--~~~~~~~~~~L~i~~v~~~D~G~ 78 (99)
T 2yr3_A 6 SGMEVAPSFS-----SVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYA--RSTCEAGVAELHIQDALPEDHGT 78 (99)
T ss_dssp SCCCEEEEEE-----ECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSC--CCEEETTEEEEEECSCCTTCCBC
T ss_pred CCcccCCcee-----ecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECccc--ceEeeCCeEEEEECCCChhhCEE
Confidence 3444555543 3456788999999999999999999999999987665322 12223334689999999999999
Q ss_pred eEEeecCC
Q psy12803 361 YMCLADNV 368 (902)
Q Consensus 361 YtC~A~N~ 368 (902)
|+|.|.|.
T Consensus 79 Y~C~a~N~ 86 (99)
T 2yr3_A 79 YTCLAENA 86 (99)
T ss_dssp EEEEEECS
T ss_pred EEEEEEEC
Confidence 99999993
No 339
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.90 E-value=3.8e-09 Score=96.90 Aligned_cols=92 Identities=15% Similarity=0.244 Sum_probs=66.6
Q ss_pred CCEEEEcCce---eeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCe
Q psy12803 369 PPQILIRNRR---VGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFD 445 (902)
Q Consensus 369 ~P~i~~~p~~---~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG 445 (902)
+|.+...+.. +.+.+|+++.|.|.+. .|.+.+.|++++..+....... +..... ..+|.|.+++.+|+|
T Consensus 10 pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~--~~~~~~-----~~~L~I~~v~~~D~G 81 (113)
T 2cpc_A 10 VSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALL--LQKEDT-----VRRLVLPAVQLEDSG 81 (113)
T ss_dssp CSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBE--EEECSS-----EEEEEESSCCTTTCE
T ss_pred CCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEE--EEECCC-----EEEEEECCCCcccCE
Confidence 3444444433 6788999999999995 8889999999886664433332 222211 235999999999999
Q ss_pred EEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 446 TYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 446 ~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
.|+|.|.| .+.++.|.|..+|..
T Consensus 82 ~Y~C~a~n----~~~~~~l~V~~~p~~ 104 (113)
T 2cpc_A 82 EYLCEIDD----ESASFTVTVTEPPVR 104 (113)
T ss_dssp EEEEESSS----CEEEEEEEEECCCCC
T ss_pred EEEEEEec----CcEEEEEEEecCCch
Confidence 99999999 567788888876643
No 340
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.89 E-value=1.4e-09 Score=110.95 Aligned_cols=98 Identities=20% Similarity=0.234 Sum_probs=72.9
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.+.|.|++++..+............. .+. ....|.|.+++.+|+|.|
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~-~~~--~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFK-DGA--LFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECT-TSC--EEESSCCBSSSCBCCEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEec-CCc--eEEEEEeccCCcccCceE
Confidence 67899999999999999999999999999999999999877664432211122111 111 122357899999999999
Q ss_pred EEEEEeCCceeE-EEEEEEeec
Q psy12803 448 RCISKNEVDIAK-GSLILFESN 468 (902)
Q Consensus 448 tC~A~N~~G~~~-~s~~L~V~~ 468 (902)
+|.|.|..|... ..+.|.|..
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~ 106 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAV 106 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECE
T ss_pred EEEEecCCCccccccceEEEEE
Confidence 999999998763 456666654
No 341
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.89 E-value=8.1e-10 Score=98.68 Aligned_cols=72 Identities=26% Similarity=0.347 Sum_probs=56.4
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCC---cEEEEeeeeecCceeEEeecCC
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASS---TLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~---sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
..+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+..... +.....++ +|.|.+++.+|+|.|+|.|.|.
T Consensus 10 ~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 84 (99)
T 1u2h_A 10 VSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQR-RFAEEAEGGLCRLRILAAERGDAGFYTCKAVNE 84 (99)
T ss_dssp ECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTT-EEEEECGGGEEEEEESSCCGGGCEEEEEEEEET
T ss_pred EcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCC-EEEEECCCCEEEEEEccCCcCCCEEEEEEEEEC
Confidence 345668899999999999999999999999998765543322 22222222 6999999999999999999883
No 342
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.89 E-value=7.2e-09 Score=112.62 Aligned_cols=157 Identities=15% Similarity=0.188 Sum_probs=95.2
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCc-eEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCC--------
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPS-IIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNV-------- 368 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~-v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~-------- 368 (902)
++.+.|.+|+++.|.|.+.- +.+. +.|.-.-........ -.....|.|.+++.+ +.|+|.+...
T Consensus 6 P~~~~V~~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~----g~~~~~~~l~~v~~~--~~y~C~~~~~~~~~~~~v 78 (291)
T 1mq8_A 6 PSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLP----GNNRKVYELSNVQED--SQPMCYSNCPDGQSTAKT 78 (291)
T ss_dssp CSEEEECTTCEEEEEEEECC-SSCSEEEEECSSCCCCCCCS----CSSEEEEEEESCCSC--CCCEEEEECSSCEEEEEC
T ss_pred CCccEEcCCCeEEEEEeCCC-CCCccceEEecCCCcccccC----CCceEEEEEEecccC--CeEEEEEEcCCccEEEEE
Confidence 45678999999999999974 5555 888532111100000 001124788888743 5799999761
Q ss_pred -------CCEEEEcCceeeeecCceEEEEEEeecc-CCc--eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEec
Q psy12803 369 -------PPQILIRNRRVGVPIGRTATLECEVEAF-PLS--VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISN 438 (902)
Q Consensus 369 -------~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P--~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~ 438 (902)
|-.+.+.+....+.+|+.++|+|.+.+. |.. +|+|++++..+..... ... ...++|.+..
T Consensus 79 ~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~-------~~~---~~~~~l~~~~ 148 (291)
T 1mq8_A 79 FLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA-------VGE---PAEVTTTVLV 148 (291)
T ss_dssp EEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC-------CBT---TEEEEEECCC
T ss_pred EEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC-------CCC---CceEEEEeee
Confidence 1111222222347889999999999876 443 5899998877643220 011 1235577776
Q ss_pred cCCCCCeEEEEEEEeCCce--------eEEEEEEEeecCCC
Q psy12803 439 VNISDFDTYRCISKNEVDI--------AKGSLILFESNAKT 471 (902)
Q Consensus 439 V~~~DsG~YtC~A~N~~G~--------~~~s~~L~V~~~p~ 471 (902)
....|.+.|+|.|.|.++. .+....|.|..+|.
T Consensus 149 ~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~ 189 (291)
T 1mq8_A 149 RRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA 189 (291)
T ss_dssp SSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-----
T ss_pred eeccCCceEEEEEEecCCccCCccccccccceEEEEEecCC
Confidence 6667767999999998663 24556777776643
No 343
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.88 E-value=9.5e-10 Score=107.47 Aligned_cols=72 Identities=21% Similarity=0.374 Sum_probs=56.7
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceecc--CCcEEEEeeeeecCceeEEeecC
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVA--SSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~--~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
..+.++.+.+|++++|.|.+.+.|.|.|.|+|++..+............ ..+|.|.+++.+|+|.|+|.|.|
T Consensus 46 ~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 119 (154)
T 1fhg_A 46 KTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVN 119 (154)
T ss_dssp ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEE
T ss_pred ccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEE
Confidence 3456789999999999999999999999999987655433222222112 24899999999999999999988
No 344
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.88 E-value=1.8e-09 Score=98.81 Aligned_cols=74 Identities=15% Similarity=0.196 Sum_probs=54.2
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCC---CceEEecCCCcccccCC-cccee---------ccCCcEEEEeeeeecCcee
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPK---PSIIWKTSENKPITLGS-WKDSA---------VASSTLNFTRINRINMGAY 361 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~---p~v~W~k~~~~~~~~~~-~~~~~---------~~~~sL~I~~Vt~~DsG~Y 361 (902)
+..+.++.+.+|++++|.|.+.|.|. |.|.|+|++........ .+... ....+|.|.+++.+|+|.|
T Consensus 8 ~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 87 (108)
T 3cx2_A 8 VMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSY 87 (108)
T ss_dssp SBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEE
T ss_pred EeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEE
Confidence 34566788999999999999999998 99999997632221111 11111 1235899999999999999
Q ss_pred EEeecCC
Q psy12803 362 MCLADNV 368 (902)
Q Consensus 362 tC~A~N~ 368 (902)
+|.|.|.
T Consensus 88 ~C~a~N~ 94 (108)
T 3cx2_A 88 RCEVSTK 94 (108)
T ss_dssp EEEEECS
T ss_pred EEEEecC
Confidence 9999993
No 345
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=2.4e-09 Score=97.85 Aligned_cols=71 Identities=23% Similarity=0.302 Sum_probs=55.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccce-eccCC--cEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDS-AVASS--TLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~-~~~~~--sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+..+.+.+|++++|.|.+.+.|.+.|.|+|++..+......... ...++ +|.|.+++.+|+|.|+|.|.|
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 87 (110)
T 2dm2_A 14 KLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAAN 87 (110)
T ss_dssp CCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEEC
T ss_pred cCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEE
Confidence 345678999999999999999999999999987665432221111 12233 699999999999999999999
No 346
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.87 E-value=1.7e-09 Score=97.66 Aligned_cols=92 Identities=21% Similarity=0.288 Sum_probs=72.1
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+.++.+.+|++++|.|.+.+.|.+ +.|++++..+... .++.+..... ..+|.|.+++.+|+|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~--~~~~~~~~~~-----~~~L~I~~v~~~D~G~Y 78 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPG--DKYSLRQEGA-----MLELVVRNLRPQDSGRY 78 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCS--SSEEEEECSS-----EEEEEECSCCTTTCCCE
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCC--CcEEEEEcCC-----EEEEEEccCCcccCEEE
Confidence 46777777888899999999999999999999 9999988776432 3444433221 34699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
+|. .|....++.|.|..++.
T Consensus 79 ~C~----~g~~~~~~~l~V~~~p~ 98 (103)
T 2e7b_A 79 SCS----FGDQTTSATLTVTALPS 98 (103)
T ss_dssp EEE----CSSCBCCBCEEEECCCC
T ss_pred EEE----ECCcEEEEEEEEEeccc
Confidence 998 56677778888887654
No 347
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=1.6e-09 Score=98.16 Aligned_cols=71 Identities=14% Similarity=0.126 Sum_probs=54.9
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceecc-CCcEEEEeeeeecCceeEEeecCC
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVA-SSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~-~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
..+.++++.+|+++.|.|.+ .|.+.++|+|++..+............ ..+|.|.+++.+|+|.|+|.|.|.
T Consensus 12 ~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 12 TPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp BCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS
T ss_pred ccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 34567899999999999999 799999999987665433322221111 137999999999999999999985
No 348
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.86 E-value=9.2e-09 Score=102.35 Aligned_cols=94 Identities=21% Similarity=0.298 Sum_probs=71.5
Q ss_pred EEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEE
Q psy12803 371 QILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCI 450 (902)
Q Consensus 371 ~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~ 450 (902)
.|...+..+.+.+|+++.|.|.+.+.|. .+.|++.++..+.. ..++.+.... ..++|.|.+++.+|+|.|+|.
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~-~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~ 76 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIS-TQRVVVQKEG-----VRSRLTIYNANIEDAGIYRCQ 76 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCC-CSSEEEEEET-----TEEEEEECSCCGGGCEEEEEE
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCC-CceEEEECCC-----CeEEEEEccCCcccCeEEEEE
Confidence 5667788899999999999999999987 89999944443322 2233332222 124699999999999999999
Q ss_pred EEeCCcee-EEEEEEEeecCCC
Q psy12803 451 SKNEVDIA-KGSLILFESNAKT 471 (902)
Q Consensus 451 A~N~~G~~-~~s~~L~V~~~p~ 471 (902)
|.|..|.. +..+.|.|..++.
T Consensus 77 ~~~~~g~~~~~~~~l~v~~~p~ 98 (189)
T 2v44_A 77 ATDAKGQTQEATVVLEIYQKLT 98 (189)
T ss_dssp EECTTSCEEEEEEEEEEECCCE
T ss_pred EEeCCCCcEEEEEEEEEecCCc
Confidence 99998876 6788888876654
No 349
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.86 E-value=5.4e-09 Score=95.17 Aligned_cols=92 Identities=22% Similarity=0.327 Sum_probs=69.6
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+..+.+.+|++++|.|.+.+. |.+.|++++..+... .++.+..... .++|.|.+++.+|+|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~--~~~~~~~~~~-----~~~L~I~~v~~~D~G~Y 77 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDG--GRYSLKQDGT-----RCELQIHDLSVADAGEY 77 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSS--SSCEEEEETT-----EEEEEESSCCTTTCSEE
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCC--CCEEEEecCC-----EEEEEECCCCcccCEEE
Confidence 56778777888899999999999999765 689999988776433 2333322221 34699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 448 RCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|.|.| ...++.|.|...+..
T Consensus 78 ~C~a~n----~~~~~~l~V~~~p~~ 98 (108)
T 2dm7_A 78 SCMCGQ----ERTSATLTVRALPAR 98 (108)
T ss_dssp EEEETT----EEEEEECEEECCCSS
T ss_pred EEEEcC----CEEEEEEEEecCCHH
Confidence 999944 577788888775543
No 350
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.86 E-value=5e-09 Score=95.60 Aligned_cols=89 Identities=20% Similarity=0.204 Sum_probs=65.5
Q ss_pred CCCEEEEcCce-eeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 368 VPPQILIRNRR-VGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 368 ~~P~i~~~p~~-~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
.+|.|...+.. +.+.+|++++|.|.+ +.|.+.+.|++++..+.... .++.+..... ..+|.|.+++.+|+|.
T Consensus 14 ~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~-~~~~~~~~~~-----~~~L~I~~v~~~D~G~ 86 (104)
T 1pd6_A 14 KSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSG-SKYIFESIGA-----KRTLTISQCSLADDAA 86 (104)
T ss_dssp TTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCS-SSSEEEEETT-----EEEEEECSCSSSSCEE
T ss_pred CCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCC-CeEEEEecCC-----EEEEEECCCCcccCEE
Confidence 45666665555 789999999999999 78999999999988775431 2333322221 2359999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEee
Q psy12803 447 YRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 447 YtC~A~N~~G~~~~s~~L~V~ 467 (902)
|+|.| +....++.|.|.
T Consensus 87 Y~C~a----~~~~~~~~l~V~ 103 (104)
T 1pd6_A 87 YQCVV----GGEKCSTELFVK 103 (104)
T ss_dssp EEEEE----TTEEECCEEEEE
T ss_pred EEEEE----CCCcEEEEEEEe
Confidence 99999 335566666664
No 351
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.86 E-value=1e-09 Score=97.80 Aligned_cols=71 Identities=23% Similarity=0.367 Sum_probs=56.1
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccC---CcEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVAS---STLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~---~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+..+.+.+|+++.|.|.+.+.|.|.+.|+|++..+......+.....+ .+|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 84 (100)
T 3irg_A 11 LPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGN 84 (100)
T ss_dssp CCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEe
Confidence 3456789999999999999999999999999776553222222222222 5799999999999999999988
No 352
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.86 E-value=1.1e-09 Score=110.71 Aligned_cols=101 Identities=20% Similarity=0.297 Sum_probs=73.6
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCC---ceEEEeecCCCceeeEeEEEEeccCCCCC
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDG---VKYSISDVDKGSYQYIMQLNISNVNISDF 444 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~---~~~~~~~~~~~s~~~~stL~I~~V~~~Ds 444 (902)
.+|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+..... ..... ...+. .....|.|.+++.+|+
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~l~i~~~~~~d~ 84 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRML--LPSGS-LFFLRIVHGRKSRPDE 84 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEE--CTTSC-EEESSCCCCSSCCCSC
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEE--ecCCc-EEEEEEEecCCCcccC
Confidence 478888888889999999999999999999999999998766543221 11111 11111 2233466778899999
Q ss_pred eEEEEEEEeCCcee-EEEEEEEeecCCC
Q psy12803 445 DTYRCISKNEVDIA-KGSLILFESNAKT 471 (902)
Q Consensus 445 G~YtC~A~N~~G~~-~~s~~L~V~~~p~ 471 (902)
|.|+|.|.|..|.. +..+.|.|...+.
T Consensus 85 G~Y~C~~~n~~g~~~~~~~~l~V~~~~~ 112 (212)
T 2v9r_A 85 GVYVCVARNYLGEAVSHDASLEVAILRD 112 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECEECS
T ss_pred eEEEEEEECCCCceeecceEEEEEeccc
Confidence 99999999999876 4566777765433
No 353
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.85 E-value=1.9e-09 Score=96.16 Aligned_cols=67 Identities=18% Similarity=0.387 Sum_probs=54.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+..+.+.+|+++.|.|.+.+.| +.+.|+|++..+.... .....++.|.|.+++.+|+|.|+|.|.|
T Consensus 15 ~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~---~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 81 (95)
T 2ckn_A 15 EVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESN---RTRITGEEVEVRDSIPADSGLYACVTSS 81 (95)
T ss_dssp BBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCS---SEEECSSEEEESSCCGGGSEEEEEEEEE
T ss_pred CcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCC---CEEEeCCEEEECCCChHHCEEEEEEecc
Confidence 45668899999999999999988 8999999766543322 2333477999999999999999999988
No 354
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=2.5e-08 Score=92.69 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=71.8
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCC-c-------eEEEeecCCCceeeEeEEEEeccC
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDG-V-------KYSISDVDKGSYQYIMQLNISNVN 440 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~-~-------~~~~~~~~~~s~~~~stL~I~~V~ 440 (902)
++.|...+.++.+.+|+++.|.|.+.+ .|.+.|++++..+..... . ++.+..... ..+|+|.+++
T Consensus 8 ~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~-----~~~L~I~~v~ 80 (112)
T 2e6q_A 8 TARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGL-----QHRLILHAVK 80 (112)
T ss_dssp CCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTT-----EEEEEEESCC
T ss_pred CcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCc-----EEEEEECCCC
Confidence 577888899999999999999999998 778999999988754331 1 555543321 3459999999
Q ss_pred CCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 441 ISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 441 ~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.+|+|.|+|...+ ....++.|.|..+|.
T Consensus 81 ~~D~G~Y~~~~~~---~~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 81 HQDSGALVGFSCP---GVQDSAALTIQESSG 108 (112)
T ss_dssp STTCSEEEEEEET---TEEEEEEEEEECSSC
T ss_pred HHHCccEEEEEEC---CeeEEEEEEEeCCCc
Confidence 9999999875443 346788999987654
No 355
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.85 E-value=4.3e-09 Score=120.63 Aligned_cols=103 Identities=25% Similarity=0.488 Sum_probs=78.6
Q ss_pred cCceeEEeecCCCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCC--ceEEEeecCCCceeeEeEE
Q psy12803 357 NMGAYMCLADNVPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDG--VKYSISDVDKGSYQYIMQL 434 (902)
Q Consensus 357 DsG~YtC~A~N~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~--~~~~~~~~~~~s~~~~stL 434 (902)
+...|.|. +|.+...+..+.+.+|++++|.|.+ +.|.|.+.|+++++.+..... .++.+ ...++ |
T Consensus 333 ~~~~~~C~----~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~--~~~~~------L 399 (440)
T 3zyj_A 333 DQNYFTCY----APVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAV--LSDGT------L 399 (440)
T ss_dssp --CCSCCC----CCCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEE--CTTCC------E
T ss_pred hhhhccCC----CCcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEE--ccCCe------E
Confidence 34566774 5888888888999999999999999 579999999987776654332 23332 22333 9
Q ss_pred EEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 435 NISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 435 ~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
.|.+|+.+|+|.|+|+|.|..|.+++++.|.|...+..
T Consensus 400 ~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~~~v~~~~~~ 437 (440)
T 3zyj_A 400 NFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTGTHHH 437 (440)
T ss_dssp EESSCCSTTCEEEEEEEECSSCEEEEEEEEEEC-----
T ss_pred EEccCChhhCEEEEEEEEcCCCcEEEEEEEEEeccccc
Confidence 99999999999999999999999999999999876654
No 356
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.85 E-value=1.3e-09 Score=98.09 Aligned_cols=73 Identities=15% Similarity=0.186 Sum_probs=56.7
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec-cCCcEEEEeeeeecCceeEEeecCC
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV-ASSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~-~~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
..+.++.+.+|+++.|.|.+.+.|.|.+.|+|++..+........... ...+|.|.+++.+|+|.|+|.|.|.
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 86 (103)
T 3qp3_A 13 LRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNY 86 (103)
T ss_dssp ECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred eCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeC
Confidence 345678899999999999999999999999998766543332111111 1237999999999999999999883
No 357
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.84 E-value=1.9e-09 Score=98.52 Aligned_cols=73 Identities=21% Similarity=0.435 Sum_probs=57.8
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcccee-ccCCcEEEEeeeeecCceeEEeecC
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA-VASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~-~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+..+.++.+.+|+++.|.|.+.|.|.|.+.|+|++..+.......... ....+|.|.+++.+|+|.|+|.|.|
T Consensus 18 ~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 18 LTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp EECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBC
T ss_pred EECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEe
Confidence 445677899999999999999999999999999876654322211111 1235899999999999999999998
No 358
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.84 E-value=1.7e-09 Score=96.50 Aligned_cols=73 Identities=19% Similarity=0.375 Sum_probs=56.4
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccC--CcEEEEeeeeecCceeEEeecCC
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVAS--STLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~--~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
+..+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+...... ...... .+|.|.+++.+|+|.|+|.|.|.
T Consensus 10 ~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 10 VTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKY-KLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSE-EEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCE-EEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 34556788999999999999999999999999977654332221 111222 27999999999999999999883
No 359
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.84 E-value=7.3e-09 Score=104.45 Aligned_cols=95 Identities=19% Similarity=0.292 Sum_probs=73.8
Q ss_pred CEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeee----------cCCceEEEeecCCCceeeEeEEEEecc
Q psy12803 370 PQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIE----------HDGVKYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 370 P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~----------~~~~~~~~~~~~~~s~~~~stL~I~~V 439 (902)
..|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+.. ....++... ..+|.|.++
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~---------~~~L~i~~v 72 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS---------SSGITFSSV 72 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE---------TTEEEESCC
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee---------ceeEEEccc
Confidence 4667778888999999999999999999999999998766321 111222221 135999999
Q ss_pred CCCCCeEEEEEEEeCCc--eeEEEEEEEeecCCCCC
Q psy12803 440 NISDFDTYRCISKNEVD--IAKGSLILFESNAKTPV 473 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~G--~~~~s~~L~V~~~p~~~ 473 (902)
+.+|+|.|+|.|.|..| ..+..+.|.|..++..+
T Consensus 73 ~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~ 108 (212)
T 1f97_A 73 TRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKP 108 (212)
T ss_dssp CGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCC
T ss_pred CcccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCc
Confidence 99999999999999977 56788888888766543
No 360
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=2.3e-09 Score=99.45 Aligned_cols=68 Identities=13% Similarity=0.286 Sum_probs=54.5
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceecc--CCcEEEEeeeeecCceeEEeecC
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVA--SSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~--~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
...+.+.+|+++.|.|.+.|.|.|.+.|+|++..+. ..... .... ..+|.|.+++.+|+|.|+|.|.|
T Consensus 31 ~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~-~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 100 (118)
T 2e7c_A 31 RQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVH-VRTSDFDTVFFVRQAARSDSGEYELSVQI 100 (118)
T ss_dssp SSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCE-EEECSSEEEEEESSCCTTTCEEEEEEEEC
T ss_pred CCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEE-EEECCCeEEEEECCCChhcCEEEEEEEEe
Confidence 456889999999999999999999999999876553 22211 2222 23599999999999999999999
No 361
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.84 E-value=3.5e-09 Score=96.09 Aligned_cols=70 Identities=20% Similarity=0.416 Sum_probs=53.1
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+.... .......+++|.|.+++.+|+|.|+|.|.|
T Consensus 16 ~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 85 (108)
T 3kvq_A 16 NLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDS-GIVLKDGNRNLTIRRVRKEDEGLYTCQACS 85 (108)
T ss_dssp CCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBT-TEEEETTTTEEEECSCCGGGCEEEEEEEC-
T ss_pred CCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCC-CeEEeCCCcEEEEeecCcccCEEEEEEEEe
Confidence 4466889999999999999999999999999877654322 223334567899999999999999999998
No 362
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.84 E-value=2.3e-09 Score=106.04 Aligned_cols=98 Identities=16% Similarity=0.212 Sum_probs=72.1
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+... .+..+..... ...++|.|.+++.+|+|.|+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~--~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~ 76 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNL--DQLYIPVSEQ---HWIGFLSLKSVERSDAGRYW 76 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSS--EEEEEEEETT---EEEEEEEESSCCGGGCEEEE
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCC--CceEEEecCC---CceEEEEEeecCcccCeEEE
Confidence 467778888899999999999999999999999999887665432 2222222221 23467999999999999999
Q ss_pred EEEEeCCce-eEEEEEEEeecCCC
Q psy12803 449 CISKNEVDI-AKGSLILFESNAKT 471 (902)
Q Consensus 449 C~A~N~~G~-~~~s~~L~V~~~p~ 471 (902)
|.|.|..+. .+..+.|.|..+|.
T Consensus 77 C~~~~~~~~~~~~~~~l~V~~~p~ 100 (182)
T 1rhf_A 77 CQVEDGGETEISQPVWLTVEGVPF 100 (182)
T ss_dssp EEESSCTTCEECCCEEEEEECSCE
T ss_pred EEEEcCCCcEEEEEEEEEEecCCe
Confidence 999999775 45678888876544
No 363
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.83 E-value=4.6e-09 Score=95.00 Aligned_cols=70 Identities=11% Similarity=0.189 Sum_probs=54.3
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceecc---CCcEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVA---SSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~---~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+.++.+.+|++++|.|.+.+ |.+.+.|+|++..+......+..... ..+|.|.+++.+|+|.|+|.|.|
T Consensus 13 ~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 13 QLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp CCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred cCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 456688999999999999988 77999999987665443321112222 25799999999999999999987
No 364
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=98.83 E-value=3.1e-08 Score=101.17 Aligned_cols=148 Identities=15% Similarity=0.162 Sum_probs=93.4
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCC-ceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC--------
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKP-SIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN-------- 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p-~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N-------- 367 (902)
.+..+.|.+|+++.|.|.+.. +.+ .+.|...-..... ..-.....+.|.+|+ +|.+.|.|.+..
T Consensus 8 ~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~-----~~g~~~~~~~ls~vs-~d~~~~~C~~~c~~~~~~~~ 80 (196)
T 3bn3_B 8 QPRVAFVERGGSLWLNCSTNC-PRPERGGLETSLRRNGT-----QRGLRWLARQLVDIR-EPETQPVCFFRCARRTLQAR 80 (196)
T ss_dssp ESSEEEEETTEEEEEEEEECC-SSCSEEEEECSSEEEEE-----EEETTEEEEEEEEEC-SSEECCEEEEEETTEEEEEE
T ss_pred cCCCcEEcCCCeEEEEEeCCC-CCCCccEEEEccCCeeE-----ccccCceEEEEEEEc-cCCCceEEEEECCCCceEEE
Confidence 455678999999999999975 444 5777532111000 000111248999999 888889999765
Q ss_pred -------CCCEEEEcCceeeeecCceEEEEEEeecc-CCce--EEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEe
Q psy12803 368 -------VPPQILIRNRRVGVPIGRTATLECEVEAF-PLSV--RYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 368 -------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P~--v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
.|-.+.+.+....+.+|+.++|+|.+.+. |... |.|++++..+..... ..........+++|.+.
T Consensus 81 v~l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~-----~~~~~~~~~~t~~~~~~ 155 (196)
T 3bn3_B 81 GLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSF-----AGEPPRARGAVLTATVL 155 (196)
T ss_dssp CEEEEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEEC-----TTSCTTCCCEEEEEEEE
T ss_pred EEEEEecCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeecccc-----ccccccccceeEEEEEe
Confidence 23333333433458899999999999875 6544 899988776643210 01111111234567776
Q ss_pred ccCCCCCeEEEEEEEeCCc
Q psy12803 438 NVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G 456 (902)
....+|...|+|.|.|.++
T Consensus 156 ~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 156 ARREDHGANFSCRAELDLR 174 (196)
T ss_dssp CCGGGTTCEEEEEEEEECG
T ss_pred eeeccCCCeEEEEEEccCC
Confidence 5555454499999999877
No 365
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.82 E-value=5.2e-09 Score=95.37 Aligned_cols=72 Identities=11% Similarity=0.199 Sum_probs=55.2
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCC-CceEEecCCCcccccCCccceecc-CCcEEEEeeeeecCceeEEeecC
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPK-PSIIWKTSENKPITLGSWKDSAVA-SSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~-p~v~W~k~~~~~~~~~~~~~~~~~-~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
..+.++.+.+|++++|.|.+.+.|. +.+.|+|++..+............ ..+|.|.+++.+|+|.|+|.|.|
T Consensus 13 ~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 86 (104)
T 2eny_A 13 KRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG 86 (104)
T ss_dssp BCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT
T ss_pred ecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC
Confidence 3456789999999999999999774 489999988766543332222111 23799999999999999999977
No 366
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.82 E-value=2e-09 Score=104.06 Aligned_cols=70 Identities=23% Similarity=0.427 Sum_probs=54.4
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCC---------------------------cccccCCccceeccC---Cc
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN---------------------------KPITLGSWKDSAVAS---ST 347 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~---------------------------~~~~~~~~~~~~~~~---~s 347 (902)
+.++++.+|++++|.|.+.|.|.|.|+|+|++. ..+.....+...... .+
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 567899999999999999999999999999882 222111122222222 36
Q ss_pred EEEEeeeeecCceeEEeecC
Q psy12803 348 LNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 348 L~I~~Vt~~DsG~YtC~A~N 367 (902)
|+|.+++.+|+|.|+|.|.|
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N 124 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKN 124 (139)
T ss_dssp EECSCCCTTTCEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEe
Confidence 99999999999999999999
No 367
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.82 E-value=1.6e-09 Score=111.22 Aligned_cols=88 Identities=18% Similarity=0.068 Sum_probs=64.8
Q ss_pred eeeeecCceEEEEEE---eeccCCceEEEEecCCeeeec-----CCc----------eEEEeecCCCceeeEeEEEEecc
Q psy12803 378 RVGVPIGRTATLECE---VEAFPLSVRYWEFIDGTLIEH-----DGV----------KYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 378 ~~~v~~G~~v~L~C~---a~g~P~P~v~W~k~~~~l~~~-----~~~----------~~~~~~~~~~s~~~~stL~I~~V 439 (902)
.+.+.+|++++|.|. +.+.|.+.|.|++++...... ... ++.+.... -..+|.|.++
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~L~I~~v 76 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSA-----NTFFLVVTAA 76 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEET-----TEEEEEESSC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcC-----CEEEEEEccC
Confidence 467899999999995 568899999999876432110 000 11111111 1346999999
Q ss_pred CCCCCeEEEEEEEeCCceeEEEEEEEeecCC
Q psy12803 440 NISDFDTYRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
+.+|+|.|+|.|.|..|..+..+.|.|..++
T Consensus 77 ~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~p~ 107 (203)
T 4fa8_A 77 NISHDGNYLCRMKLGETEVTKQEHLSVVKPL 107 (203)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred CHHHCeEEEEEEEcCCCcEEEEEEEEecCCc
Confidence 9999999999999999999999999997644
No 368
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.81 E-value=1.1e-08 Score=98.60 Aligned_cols=95 Identities=16% Similarity=0.175 Sum_probs=69.2
Q ss_pred EEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeec------CCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 373 LIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEH------DGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 373 ~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~------~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
...+..+.+.+|++++|.|.+.+.|.+.+.|++.+...+.. ...++....... ...+|.|.+++.+|+|.
T Consensus 42 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~----~~~~L~I~~v~~~DsG~ 117 (145)
T 1z9m_A 42 QPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTP----HELSISISNVALADEGE 117 (145)
T ss_dssp CCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEECS----SEEEEEECSCCGGGCEE
T ss_pred ecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecCCC----CeEEEEECCCChhhCEE
Confidence 34566788999999999999999999999998543322211 112222211111 13569999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 447 YRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 447 YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
|+|.|.|. +.....+.|.|..+|.+
T Consensus 118 Y~C~~~n~-~~~~~~~~L~V~~~P~~ 142 (145)
T 1z9m_A 118 YTCSIFTM-PVRTAKSLVTVLGIPQK 142 (145)
T ss_dssp EEEEECSS-SCEEEEEEEEEECCCC-
T ss_pred EEEEEEcC-CCceEEEEEEEEeCCCC
Confidence 99999999 98999999999876543
No 369
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.81 E-value=3.3e-09 Score=105.56 Aligned_cols=95 Identities=24% Similarity=0.256 Sum_probs=73.1
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+.. ...++.+.... .+|.|.+++.+|+|.|+
T Consensus 7 ~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~-~~~~~~~~~~~-------~~L~i~~~~~~d~G~Y~ 78 (192)
T 2iep_A 7 APVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKL-FDTRYSIRENG-------QLLTILSVEDSDDGIYC 78 (192)
T ss_dssp EEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCT-TCTTEEEEGGG-------TEEEESSCCGGGCEEEE
T ss_pred CceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccc-cCccEEEcCCc-------cEEEEcCCCcccCeEEE
Confidence 46777777788899999999999999999999999987765543 23334333221 24999999999999999
Q ss_pred EEEEeCCce-eEEEEEEEeecCCC
Q psy12803 449 CISKNEVDI-AKGSLILFESNAKT 471 (902)
Q Consensus 449 C~A~N~~G~-~~~s~~L~V~~~p~ 471 (902)
|.|.|..|. ....+.|.|...+.
T Consensus 79 C~~~~~~~~~~~~~~~l~v~~~p~ 102 (192)
T 2iep_A 79 CTANNGVGGAVESCGALQVKMKPK 102 (192)
T ss_dssp EEEECSSSCCEEEEEEEEEEEEEE
T ss_pred EEEEcCCCceeEeEEEEEEEeCCc
Confidence 999999887 45667777765443
No 370
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.79 E-value=4.4e-09 Score=93.83 Aligned_cols=63 Identities=25% Similarity=0.431 Sum_probs=53.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+....+.+|++++|.|.+.+.|.+.+.|+|++..+... .+.+|.|.+++.+|+|.|+|.|.|
T Consensus 16 ~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n 78 (96)
T 2ens_A 16 EPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP--------PSPVLILPEIGPQDQGTYSCVATH 78 (96)
T ss_dssp ESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC--------CCSEEEEESCCTTTCEEEECEECC
T ss_pred CCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC--------CCCEEEECCCCcccCEEEEEEEEe
Confidence 455677999999999999999999999999976654221 356899999999999999999998
No 371
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.79 E-value=5.2e-09 Score=108.28 Aligned_cols=98 Identities=15% Similarity=0.178 Sum_probs=73.3
Q ss_pred CCCEEEEc----CceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCC
Q psy12803 368 VPPQILIR----NRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISD 443 (902)
Q Consensus 368 ~~P~i~~~----p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~D 443 (902)
.+|.|... +..+.+.+|+++.|.|.+.+.|.+.+.|++++..+............... .+|.|.+++.+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~------~~L~i~~v~~~d 83 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQ------WSLVMESVVPSD 83 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGG------TEEEECSCCGGG
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccc------eEEEEEeCCccc
Confidence 35666543 34678999999999999999999999999988766443222111111122 249999999999
Q ss_pred CeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 444 FDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 444 sG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
+|.|+|.|.|..+....++.|.|...+.
T Consensus 84 ~G~Y~C~~~~~~~~~~~~~~l~V~~~~~ 111 (241)
T 3grw_A 84 RGNYTCVVENKFGSIRQTYTLDVLERSP 111 (241)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred CEEEEEEEeecCCceEEEEEEEEeccCC
Confidence 9999999999999999999999876433
No 372
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.79 E-value=2e-09 Score=96.46 Aligned_cols=70 Identities=20% Similarity=0.367 Sum_probs=55.7
Q ss_pred CcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcc--ceeccCCcEEEEeeeeecCceeEEeecCC
Q psy12803 299 SPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWK--DSAVASSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~--~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
..+.+.+|+++.|.|.+.|.|.+.+.|+|++..+....... .......+|.|.+++.+|+|.|+|.|.|.
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 87 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENE 87 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEET
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeC
Confidence 45788999999999999999999999999876654332211 22233458999999999999999999883
No 373
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.79 E-value=6.8e-09 Score=92.53 Aligned_cols=71 Identities=17% Similarity=0.260 Sum_probs=55.9
Q ss_pred cCCcEEEEcCCeEEEEEecCCC-CCCceEEecCCCcccccCCccceeccCC--cEEEEeeeeecCceeEEeecCC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGH-PKPSIIWKTSENKPITLGSWKDSAVASS--TLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~-P~p~v~W~k~~~~~~~~~~~~~~~~~~~--sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
.+.++.+.+|++++|.|.+.+. |.+.+.|+|++..+..... ......++ +|.|.+++.+|+|.|+|.|.|.
T Consensus 7 ~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (97)
T 2bk8_A 7 QIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEK-YEITYEDGVAILYVKDITKLDDGTYRCKVVND 80 (97)
T ss_dssp CCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSS-EEEEEETTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred cCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCC-EEEEEcCCeEEEEEecCChhhCeEEEEEEECC
Confidence 4556889999999999999997 9999999998765433222 12222333 8999999999999999999983
No 374
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.79 E-value=4.3e-09 Score=95.15 Aligned_cols=67 Identities=15% Similarity=0.218 Sum_probs=52.6
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec-cCCcEEEEeeeeecCceeEEeecCC
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV-ASSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~-~~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
+.+.+|++++|.|.+.+.|.+ +.|+|++..+........... ....|.|.+++.+|+|.|+|.|.|.
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 87 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGV 87 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSC
T ss_pred EEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCc
Confidence 789999999999999999988 999998765543322222111 1247999999999999999999883
No 375
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.78 E-value=5.7e-09 Score=94.88 Aligned_cols=73 Identities=12% Similarity=0.179 Sum_probs=56.5
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec-cCCcEEEEeeeeecCceeEEeecCC
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV-ASSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~-~~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
+..+.++.+.+|++++|.|.+.+.|.+ +.|+|++..+........... ....|.|.+++.+|+|.|+|.|.|.
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 85 (106)
T 2dlt_A 12 LQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY 85 (106)
T ss_dssp EECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS
T ss_pred ecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC
Confidence 345667899999999999999998887 999998876644332221111 1138999999999999999999984
No 376
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=4.8e-09 Score=94.47 Aligned_cols=72 Identities=14% Similarity=0.235 Sum_probs=56.1
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCc--cceeccC---CcEEEEeeeeecCceeEEeecC
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSW--KDSAVAS---STLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~--~~~~~~~---~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+..+.++.+.+|++++|.|.+.+.| +.+.|+|++..+...... +.....+ ..|.|.+++.+|+|.|+|.|.|
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 88 (101)
T 2edk_A 12 VTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG 88 (101)
T ss_dssp EECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSS
T ss_pred EecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcC
Confidence 3345678899999999999999988 999999988766443321 2222222 3699999999999999999987
No 377
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.78 E-value=5.4e-09 Score=92.23 Aligned_cols=64 Identities=22% Similarity=0.363 Sum_probs=54.0
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
.+....+.+|+++.|.|.+.|.|.|.+.|+|++..+... ..++|.|.+++.+|+|.|+|.|.|.
T Consensus 9 ~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~ 72 (91)
T 3bfo_A 9 EPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE--------TKKLYMVPYVDLEHQGTYWCHVYND 72 (91)
T ss_dssp CCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTC--------CSSEEEESSCCGGGCEEEEEEEECS
T ss_pred CCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC--------CCCeEEECCCCHHhCEEEEEEEEcC
Confidence 455678999999999999999999999999976543221 2458999999999999999999993
No 378
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.77 E-value=1.6e-08 Score=100.39 Aligned_cols=93 Identities=19% Similarity=0.249 Sum_probs=73.4
Q ss_pred CCEEEEcCc--eeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 369 PPQILIRNR--RVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 369 ~P~i~~~p~--~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
+|.|..... ++.+.+|+++.|.|.+.+.|.+.+.|++++..+... .++.+. ... .+|.|.+++.+|+|.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~--~~~~~~-~~~------~~L~i~~~~~~d~G~ 72 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN--EKYILK-GSN------TELTVRNIINSDGGP 72 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCS--SSEEEE-TTT------TEEEECSCCGGGCEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCC--ccEEEe-CCe------eEEEEecCChhcCcE
Confidence 677777544 577889999999999999999999999987766433 233322 222 249999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEeecCC
Q psy12803 447 YRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 447 YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
|+|.|.|..+.....+.|.|..+|
T Consensus 73 Y~C~~~~~~~~~~~~~~l~V~~~p 96 (192)
T 2va4_A 73 YVCRATNKAGEDEKQAFLQVFVQP 96 (192)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEE
T ss_pred EEEEEEccccccceEEEEEEEccC
Confidence 999999999999888888886544
No 379
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.77 E-value=1.1e-08 Score=103.22 Aligned_cols=96 Identities=13% Similarity=0.151 Sum_probs=69.1
Q ss_pred EEEcCceeeeecCceEEEEEEeeccCC-----ceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 372 ILIRNRRVGVPIGRTATLECEVEAFPL-----SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 372 i~~~p~~~~v~~G~~v~L~C~a~g~P~-----P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
+...+..+.+.+|+++.|.|.+.+.|. +.+.|++.+........ ++.+.... ......+|.|.+++.+|+|.
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~-r~~~~~~~--~~~~~~~L~I~~v~~~D~G~ 81 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSE-RATLLEEQ--LPLGKALFHIPSVQVRDSGQ 81 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCS-SCEECGGG--GGGTEEEEEECSCCGGGCEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCC-ceEEeecc--ccCCeeEEEECCCCHHHCcE
Confidence 344556788999999999999999987 89999995544433222 22221110 00123469999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEeecCC
Q psy12803 447 YRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 447 YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
|+|.|.|..+..+..+.|.|...+
T Consensus 82 Y~C~~~~~~~~~~~~~~l~V~~~~ 105 (202)
T 3bp6_B 82 YRCLVICGAAWDYKYLTVKVKASY 105 (202)
T ss_dssp EEEEEEETTEEEEEEEEEEEEBCC
T ss_pred EEEEEEeCCCcceEEEEEEecCCC
Confidence 999999999988999999998654
No 380
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.77 E-value=4.4e-09 Score=99.74 Aligned_cols=74 Identities=15% Similarity=0.197 Sum_probs=53.5
Q ss_pred eecCCcEEEEcCCeEEEEEecCCC---CCCceEEecCCCcccccC-Ccccee---------ccCCcEEEEeeeeecCcee
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGH---PKPSIIWKTSENKPITLG-SWKDSA---------VASSTLNFTRINRINMGAY 361 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~---P~p~v~W~k~~~~~~~~~-~~~~~~---------~~~~sL~I~~Vt~~DsG~Y 361 (902)
+..+.++.|.+|++++|.|.+.+. |.|.|+|+|+....+... ..+... ....+|+|.+|+.+|+|.|
T Consensus 11 ~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y 90 (126)
T 2dav_A 11 IEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNY 90 (126)
T ss_dssp CSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEE
T ss_pred EEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEE
Confidence 334567889999999999999874 899999999632111110 111111 1136899999999999999
Q ss_pred EEeecCC
Q psy12803 362 MCLADNV 368 (902)
Q Consensus 362 tC~A~N~ 368 (902)
+|+|.|.
T Consensus 91 ~Cevsn~ 97 (126)
T 2dav_A 91 RCEVTYK 97 (126)
T ss_dssp EEEEECS
T ss_pred EEEEEeC
Confidence 9999983
No 381
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.77 E-value=4e-09 Score=121.34 Aligned_cols=106 Identities=29% Similarity=0.536 Sum_probs=79.0
Q ss_pred eeeecCceeEEeecCCCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCC--ceEEEeecCCCceee
Q psy12803 353 INRINMGAYMCLADNVPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDG--VKYSISDVDKGSYQY 430 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~--~~~~~~~~~~~s~~~ 430 (902)
+..-|.+.|.|. +|.+...+..+.+.+|++++|.|.+. |.|.|.|+++++.+..... .++.+ ..+++
T Consensus 340 l~~~~~~~~~C~----~P~i~~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~--~~~g~--- 408 (452)
T 3zyi_A 340 LVEVDQASFQCS----APFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISV--LNDGT--- 408 (452)
T ss_dssp TTSCCGGGCCCC----CCCCSBCCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEE--CTTSC---
T ss_pred hhccchhhhccc----CcccccccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEE--CCCCe---
Confidence 334455677885 47777777788899999999999998 9999999997776654332 12222 22333
Q ss_pred EeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 431 IMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 431 ~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
|.|.+++.+|+|.|+|+|.|..|.+++++.|.|.+.+..
T Consensus 409 ---L~i~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~ 447 (452)
T 3zyi_A 409 ---LNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVSTAGTH 447 (452)
T ss_dssp ---EECSSCCTTCCEEEEEEEECSSCEEEEEEEEEC------
T ss_pred ---EEEeecCHHHCEEEEEEEEcCCCcEEEEEEEEEEccccc
Confidence 999999999999999999999999999999999876554
No 382
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.76 E-value=9.8e-09 Score=92.71 Aligned_cols=73 Identities=15% Similarity=0.304 Sum_probs=56.5
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCC------ccceec----cCCcEEEEeeeeecCceeEEe
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGS------WKDSAV----ASSTLNFTRINRINMGAYMCL 364 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~------~~~~~~----~~~sL~I~~Vt~~DsG~YtC~ 364 (902)
+..+.++.+.+|++++|.|.+.+.|.+.+.|+|++...+.... .+.... .+.+|.|.+++.+|+|.|+|.
T Consensus 10 ~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (108)
T 3m45_A 10 FPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCS 89 (108)
T ss_dssp CEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEE
T ss_pred cccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEE
Confidence 4456778999999999999999999999999997763322111 122211 345899999999999999999
Q ss_pred ecC
Q psy12803 365 ADN 367 (902)
Q Consensus 365 A~N 367 (902)
|.|
T Consensus 90 ~~n 92 (108)
T 3m45_A 90 LFT 92 (108)
T ss_dssp ECS
T ss_pred EEc
Confidence 988
No 383
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.76 E-value=6.4e-09 Score=93.79 Aligned_cols=69 Identities=17% Similarity=0.280 Sum_probs=54.8
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccC---CcEEEEeeeeecCceeEEeecC
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVAS---STLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~---~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
..+.++.+.+|++++|.|.+.+ |.+.+.|+|++..+..... .....+ ..|.|.+++.+|+|.|+|.|.|
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~--~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 13 KPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQK--YDVVCEGTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp ECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSS--EEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred ecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCC--EEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence 3456688999999999999998 8889999998776543332 222222 2699999999999999999988
No 384
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.76 E-value=7.2e-10 Score=122.70 Aligned_cols=106 Identities=18% Similarity=0.184 Sum_probs=86.4
Q ss_pred cCceeEEeecC----------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCC
Q psy12803 357 NMGAYMCLADN----------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKG 426 (902)
Q Consensus 357 DsG~YtC~A~N----------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~ 426 (902)
|.+.|+|.+.+ .+|.+...+..+.+.+|+++.|.|.+.+.|.|.+.|++++..+.......
T Consensus 136 ~~~~~~C~~~~~l~~l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~--------- 206 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKS--------- 206 (347)
T ss_dssp GGGCCCCSSSSCSSCCCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCC---------
T ss_pred cccCCCCCCChHHhcCCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccc---------
Confidence 57899998866 57899988888899999999999999999999999999886643221110
Q ss_pred ceeeEeEEEEeccCCCCCe-EEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 427 SYQYIMQLNISNVNISDFD-TYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 427 s~~~~stL~I~~V~~~DsG-~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.....++|.|.+++.+|+| .|+|.|.|..|..+.++.|.|..+|.
T Consensus 207 ~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~ 252 (347)
T 2ifg_A 207 GGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPAS 252 (347)
T ss_dssp CCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEE
T ss_pred eecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCe
Confidence 1122456999999999999 99999999999998888888876554
No 385
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.75 E-value=4.3e-09 Score=95.34 Aligned_cols=70 Identities=27% Similarity=0.490 Sum_probs=56.1
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCC---cEEEEeeeeecCceeEEeecC
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASS---TLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~---sL~I~~Vt~~DsG~YtC~A~N 367 (902)
..+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+.... +.....++ +|.|.+++.+|+|.|+|.|.|
T Consensus 18 ~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~--~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 18 RFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASE--RLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS--SEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred cCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCC--cEEEEeCCCEEEEEEccCCHHhCEEEEEEEEc
Confidence 34567889999999999999999999999999776543322 22222333 799999999999999999988
No 386
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.75 E-value=9.3e-09 Score=95.09 Aligned_cols=73 Identities=15% Similarity=0.159 Sum_probs=57.0
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcccee--ccCCcEEEEeeeeecCceeEEeecC
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA--VASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~--~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+..+.++++.+|++++|.|.+.+.|.|.+.|+|++..+.......... ....+|.|.+++.+|+|.|+|.+.+
T Consensus 17 ~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~g~ 91 (115)
T 2cr6_A 17 IEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEAGD 91 (115)
T ss_dssp EECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEETT
T ss_pred eccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEECC
Confidence 345677899999999999999999999999999877654433322221 1234899999999999999999654
No 387
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=98.75 E-value=4e-08 Score=116.24 Aligned_cols=152 Identities=16% Similarity=0.187 Sum_probs=102.0
Q ss_pred EEcCCeEEEEEecCCC-CC---CceEEecCCCcccccCCccceecc------CCcEEEEeeeeecCceeEEeecC-----
Q psy12803 303 VREGDNVRLRCVATGH-PK---PSIIWKTSENKPITLGSWKDSAVA------SSTLNFTRINRINMGAYMCLADN----- 367 (902)
Q Consensus 303 v~eGe~v~L~C~a~G~-P~---p~v~W~k~~~~~~~~~~~~~~~~~------~~sL~I~~Vt~~DsG~YtC~A~N----- 367 (902)
+..+.++.|.|.+.+. |. ..|+|++++..+............ .+.|.|......|.+.|+|++.+
T Consensus 355 ~~~~~~~~l~C~~~~~~p~~~~i~v~W~~~~~~~~~~~t~~~~~~~n~~~~~~s~L~i~~~~~~~~~~y~C~v~~~~~~~ 434 (551)
T 1ntl_A 355 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 434 (551)
T ss_pred eeeccCcceEEEEEecccCCCceEEEEEECCccccccccCCceECCCCeEEEEEeeEcCHHHccCCceEEEEEecCCCCC
Confidence 5678899999999984 43 589999988765322111111111 23577777777789999999988
Q ss_pred -------------CCCEEEEcCceeeeecCceEEEEEEeecc-CC-ceEEEEecCCeeeecCCceEEEeecCCCceeeEe
Q psy12803 368 -------------VPPQILIRNRRVGVPIGRTATLECEVEAF-PL-SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 368 -------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~-P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~s 432 (902)
.+|.+.+.+....+..|+.++|.|.+.++ |. ..|+|++++..+.. ..........++++...+
T Consensus 435 ~~~~~~~~~~~~~~~P~V~~~~~~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~~--~~~~~~~~~~dgty~~~s 512 (551)
T 1ntl_A 435 PIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAEN--YKNTQPIMNTNGSYFVYS 512 (551)
T ss_pred CeEEEEecCCCCCcCCceEEeCCChhhccCCceEEEEEEEEeECCCCEEEEEECCEEccC--ceeccceeCCCCCEEEEE
Confidence 12333222222224468899999999985 54 48999988776532 111222335667888888
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCc
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G 456 (902)
.|.|......+.+.|+|+|.+..-
T Consensus 513 ~l~v~~~~~~~~~~ytC~V~h~~l 536 (551)
T 1ntl_A 513 KLNVQKSNWEAGNTFTCSVLHEGL 536 (551)
T ss_pred EEEEcHHHcCCCCeEEEEEEECCC
Confidence 899887766678999999998754
No 388
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.74 E-value=1.5e-08 Score=92.38 Aligned_cols=69 Identities=19% Similarity=0.297 Sum_probs=53.6
Q ss_pred cCCc-EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCC---cEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSP-IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASS---TLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~-v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~---sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+.+ +.+.+|++++|.|.+ +.|.+.|.|+|++..+.... .+.....++ +|.|.+++.+|+|.|+|.|.|
T Consensus 21 ~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~-~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 93 (104)
T 1pd6_A 21 KLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSG-SKYIFESIGAKRTLTISQCSLADDAAYQCVVGG 93 (104)
T ss_dssp ECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCS-SSSEEEEETTEEEEEECSCSSSSCEEEEEEETT
T ss_pred cCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCC-CeEEEEecCCEEEEEECCCCcccCEEEEEEECC
Confidence 3344 789999999999999 68999999999877654431 222233233 899999999999999999966
No 389
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=5.2e-09 Score=98.13 Aligned_cols=74 Identities=16% Similarity=0.194 Sum_probs=53.8
Q ss_pred eecCCcEEEEcCCeEEEEEecCCC---CCCceEEecCCCcccccC-Ccccee---------ccCCcEEEEeeeeecCcee
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGH---PKPSIIWKTSENKPITLG-SWKDSA---------VASSTLNFTRINRINMGAY 361 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~---P~p~v~W~k~~~~~~~~~-~~~~~~---------~~~~sL~I~~Vt~~DsG~Y 361 (902)
+..+.++.|.+|++++|.|.+.+. |.|.|+|+|+....+... ..+... ..+.+|+|.+|+.+|+|.|
T Consensus 16 ~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 95 (118)
T 2edn_A 16 LKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYY 95 (118)
T ss_dssp SBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCE
T ss_pred EECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEE
Confidence 334677889999999999999874 799999999632221111 111111 1146899999999999999
Q ss_pred EEeecCC
Q psy12803 362 MCLADNV 368 (902)
Q Consensus 362 tC~A~N~ 368 (902)
+|+|.|.
T Consensus 96 ~Cevsn~ 102 (118)
T 2edn_A 96 RLEVKAK 102 (118)
T ss_dssp EEEEECS
T ss_pred EEEEEEc
Confidence 9999983
No 390
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.73 E-value=8.1e-09 Score=98.43 Aligned_cols=75 Identities=25% Similarity=0.381 Sum_probs=57.8
Q ss_pred ceeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccC--------Cccce------eccCCcEEEEeeeeecC
Q psy12803 293 EHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLG--------SWKDS------AVASSTLNFTRINRINM 358 (902)
Q Consensus 293 ~~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~--------~~~~~------~~~~~sL~I~~Vt~~Ds 358 (902)
..+..+.++.+.+|++++|.|.+.+.|.|.+.|+|++..+.... ..+.. ...+++|.|.+++.+|+
T Consensus 23 ~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 102 (137)
T 3qr2_A 23 GFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDT 102 (137)
T ss_dssp EEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGC
T ss_pred eEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccC
Confidence 33456778899999999999999999999999999776543210 00111 11346899999999999
Q ss_pred ceeEEeecC
Q psy12803 359 GAYMCLADN 367 (902)
Q Consensus 359 G~YtC~A~N 367 (902)
|.|+|.|.|
T Consensus 103 G~Y~C~a~N 111 (137)
T 3qr2_A 103 GTYECRASN 111 (137)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEe
Confidence 999999999
No 391
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.73 E-value=1.1e-08 Score=93.01 Aligned_cols=64 Identities=17% Similarity=0.255 Sum_probs=49.0
Q ss_pred EcCCeEEEEEecCCCCCCceEEecCCCcccccCCccc--eecc----CCcEEEEeeeeecCceeEEeecC
Q psy12803 304 REGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKD--SAVA----SSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 304 ~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~--~~~~----~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
..++.+.|.|.+.|.|.|.++|+|++..+........ .... .++|.|.+++.+|+|.|+|.|.|
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N 83 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKN 83 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEC
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEe
Confidence 4688999999999999999999998765543321101 1112 23599999999999999999999
No 392
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.72 E-value=1.7e-08 Score=89.79 Aligned_cols=70 Identities=11% Similarity=0.239 Sum_probs=53.3
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceecc-CCcEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVA-SSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~-~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+.++.+.+|++++|.|.+ +.|.+.+.|+|++..+............ ..+|.|.+++.+|+|.|+|.|.+
T Consensus 14 ~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ag~ 84 (95)
T 2k1m_A 14 KPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIAGS 84 (95)
T ss_dssp CCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEETT
T ss_pred CCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEECC
Confidence 4566889999999999999 7889999999987665433222211111 13799999999999999999854
No 393
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.72 E-value=2.9e-08 Score=101.30 Aligned_cols=91 Identities=13% Similarity=0.150 Sum_probs=66.8
Q ss_pred EEEcCcee-eeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEE
Q psy12803 372 ILIRNRRV-GVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCI 450 (902)
Q Consensus 372 i~~~p~~~-~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~ 450 (902)
+.+.+... .+.+|++++|.|.+.|.|.|.|.|++...... . ..... ... ..+|.|.+++.+|+|.|+|.
T Consensus 3 v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~-~~~~~-~~~------~~~L~I~~v~~~D~G~Y~C~ 72 (202)
T 1vca_A 3 IETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL--N-GKVTN-EGT------TSTLTMNPVSFGNEHSYLCT 72 (202)
T ss_dssp EEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCC--S-SEEEE-ETT------EEEEEESSCCGGGCSEEEEE
T ss_pred EEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc--c-ceEEE-cCC------ccEEEECcCCHHHCEEEEEE
Confidence 44445544 44599999999999999999999987432211 1 11111 111 23499999999999999999
Q ss_pred EEeCCceeEEEEEEEeecCCCC
Q psy12803 451 SKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 451 A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
|.|..|..+..+.|.|..+|..
T Consensus 73 a~n~~~~~~~~~~l~V~~~p~~ 94 (202)
T 1vca_A 73 ATCESRKLEKGIQVEIYSFPKD 94 (202)
T ss_dssp EEETTEEEEEEEEEEEEBCCSC
T ss_pred EEECCceEeeEEEEEEEeCCCC
Confidence 9999999889999999876543
No 394
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.71 E-value=1.7e-08 Score=101.56 Aligned_cols=104 Identities=15% Similarity=0.220 Sum_probs=71.9
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecC--CceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHD--GVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~--~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
+..+...+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+.... ..... ............+|.|.+++.+|+|.
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~L~i~~~~~~d~G~ 82 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKIT-ASYEDRVTFLPTGITFKSVTREDTGT 82 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEEC-TTTTTTCEEETTEEECSCCCTTSCSE
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccC-ccccCceEeeccEEEEeeCCHHHCcE
Confidence 3566667788889999999999999999999999999876632110 00000 00000111111459999999999999
Q ss_pred EEEEEEeCCc--eeEEEEEEEeecCCCCC
Q psy12803 447 YRCISKNEVD--IAKGSLILFESNAKTPV 473 (902)
Q Consensus 447 YtC~A~N~~G--~~~~s~~L~V~~~p~~~ 473 (902)
|+|.|.|..| ..+..+.|.|..++..+
T Consensus 83 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~ 111 (209)
T 1nbq_A 83 YTCMVSEEGGNSYGEVKVKLIVLVPPSKP 111 (209)
T ss_dssp EEEEEEETTSSCEECCEEECCEEBCCCCC
T ss_pred EEEEEecCCCCccceEEEEEEEecCCcCC
Confidence 9999999866 44567777777766543
No 395
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.71 E-value=5.2e-08 Score=100.29 Aligned_cols=94 Identities=21% Similarity=0.160 Sum_probs=64.6
Q ss_pred CceeeeecCceEEEEEEeeccCCc---eEEEEecCCeeee---cCC------------ceEEEeecCCCceeeEeEEEEe
Q psy12803 376 NRRVGVPIGRTATLECEVEAFPLS---VRYWEFIDGTLIE---HDG------------VKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 376 p~~~~v~~G~~v~L~C~a~g~P~P---~v~W~k~~~~l~~---~~~------------~~~~~~~~~~~s~~~~stL~I~ 437 (902)
...+.+.+|++|+|.|.+.+.+.+ .|.|++++..... .++ .+...... ....-..+|.|.
T Consensus 11 ~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~--~~~~~~~~L~I~ 88 (226)
T 4f80_A 11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRD--GITAGKAALRIH 88 (226)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECT--TGGGTEEEEEES
T ss_pred CCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecc--cccCCeEEEEEe
Confidence 445788999999999999877655 6999987643211 010 01111100 011123569999
Q ss_pred ccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 438 NVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
+++.+|+|.|+|.|.|..|..+..+.+.+.....
T Consensus 89 ~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~ 122 (226)
T 4f80_A 89 NVTASDSGKYLCYFQDGDFYEKALVELKVAALGS 122 (226)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCC
T ss_pred eCchHHCeeEEEEEECCCcEEEEEEEEeecccee
Confidence 9999999999999999999888887777765443
No 396
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.71 E-value=8.9e-09 Score=91.96 Aligned_cols=68 Identities=21% Similarity=0.468 Sum_probs=54.9
Q ss_pred cCCcEEEEcCCeEEEEEecC-CCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCC
Q psy12803 297 SSSPIVVREGDNVRLRCVAT-GHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~-G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
.+..+.+.+|++++|.|.+. +.|.+.+.|+|++..... ......+++|.|.+++.+|+|.|+|.|.|.
T Consensus 16 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~----~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 84 (98)
T 1gl4_B 16 EQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLP----SRAMDFNGILTIRNVQPSDAGTYVCTGSNM 84 (98)
T ss_dssp SCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCC----TTEEEETTEEEECSCCGGGCEEEEEEEECS
T ss_pred CCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCC----ceeecCCCEEEEeCCChhhCEEEEEEecCC
Confidence 34567899999999999998 689999999997543322 123345679999999999999999999983
No 397
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.70 E-value=2.4e-08 Score=103.71 Aligned_cols=93 Identities=17% Similarity=0.140 Sum_probs=65.8
Q ss_pred EEEcCceeeeecCceEEEEEEeec---cCCceEEEEecCCee----eec------------------------CCceEEE
Q psy12803 372 ILIRNRRVGVPIGRTATLECEVEA---FPLSVRYWEFIDGTL----IEH------------------------DGVKYSI 420 (902)
Q Consensus 372 i~~~p~~~~v~~G~~v~L~C~a~g---~P~P~v~W~k~~~~l----~~~------------------------~~~~~~~ 420 (902)
+...+..+.+.+|++++|.|.+.+ .|.+.|.|++++... ... ...+..+
T Consensus 5 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp EECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 344556788999999999999998 888999999876331 100 0111111
Q ss_pred eecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCce-----eEEEEEEEeecCC
Q psy12803 421 SDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDI-----AKGSLILFESNAK 470 (902)
Q Consensus 421 ~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~-----~~~s~~L~V~~~p 470 (902)
..... .+|.|.+++.+|+|.|+|.|.|..+. +..++.|.|...+
T Consensus 85 ~~~~~------~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~ 133 (250)
T 2fbo_J 85 ANLAA------PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHT 133 (250)
T ss_dssp SCTTS------CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTS
T ss_pred ccCCc------ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccC
Confidence 11111 24999999999999999999998764 3668888887753
No 398
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.69 E-value=9.6e-09 Score=95.53 Aligned_cols=71 Identities=23% Similarity=0.306 Sum_probs=52.3
Q ss_pred CCcEEEEcCCeEEEEEecCC--CCCCceEEecCCCccccc---CCccce------eccCCcEEEEeeeeecCceeEEeec
Q psy12803 298 SSPIVVREGDNVRLRCVATG--HPKPSIIWKTSENKPITL---GSWKDS------AVASSTLNFTRINRINMGAYMCLAD 366 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G--~P~p~v~W~k~~~~~~~~---~~~~~~------~~~~~sL~I~~Vt~~DsG~YtC~A~ 366 (902)
+..+.+.+|++++|.|.+.+ .|.+.+.|++++..+... ...... ....++|.|.+++.+|+|.|+|.|.
T Consensus 15 ~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 94 (122)
T 3s35_X 15 SHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 94 (122)
T ss_dssp CSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEc
Confidence 34568999999999999998 455789999987743210 111111 1134579999999999999999999
Q ss_pred CC
Q psy12803 367 NV 368 (902)
Q Consensus 367 N~ 368 (902)
|.
T Consensus 95 n~ 96 (122)
T 3s35_X 95 SG 96 (122)
T ss_dssp CS
T ss_pred cC
Confidence 83
No 399
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.69 E-value=7e-09 Score=104.55 Aligned_cols=91 Identities=13% Similarity=0.129 Sum_probs=67.9
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+.. .+.+|++++|.|.+.+ |.+.+.|++++..+.... ...... ....+|.|.+++.+|+|.|+
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~----~~~~~~----~~~~~L~i~~v~~~D~G~Y~ 74 (196)
T 3p2t_A 5 KPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDR----QNPLEP----KNKARFSIPSMTEDYAGRYR 74 (196)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEE----ECCCSS----SSEEEEEESSCCGGGCEEEE
T ss_pred CCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccc----cccccC----CceEEEEeccCCcccCceEE
Confidence 5777777776 7899999999999998 778999999887653211 000000 11346999999999999999
Q ss_pred EEEEeCCce--eEEEEEEEeecC
Q psy12803 449 CISKNEVDI--AKGSLILFESNA 469 (902)
Q Consensus 449 C~A~N~~G~--~~~s~~L~V~~~ 469 (902)
|.|.|..|. .+..+.|.|...
T Consensus 75 C~a~n~~g~~~~s~~~~l~V~~~ 97 (196)
T 3p2t_A 75 CYYRSPVGWSQPSDPLELVMTGA 97 (196)
T ss_dssp EEEEETTEEBCCCCCEEEEEECS
T ss_pred EEEeCCCcccCCCccEEEEecCC
Confidence 999999983 356677777654
No 400
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.69 E-value=2.3e-08 Score=111.69 Aligned_cols=85 Identities=19% Similarity=0.244 Sum_probs=68.8
Q ss_pred cCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecC--CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEE
Q psy12803 375 RNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHD--GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISK 452 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~--~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~ 452 (902)
.+..+.+.+|++++|.|.+.+ |.|.|.|+++++.+.... ..++.+ ..+ +|.|.+|+.+|+|.|+|+|.
T Consensus 252 ~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~---~~~------~L~I~~v~~~D~G~Y~C~a~ 321 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV---RNG------DLFFKKVQVEDGGVYTCYAM 321 (361)
T ss_dssp CCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE---ETT------EEEESSCCTTSCEEEEEEEE
T ss_pred cccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe---ecC------eEEEeecCcccCEEEEEEEe
Confidence 345678999999999999999 999999999877654422 123333 222 49999999999999999999
Q ss_pred eCCceeEEEEEEEeecC
Q psy12803 453 NEVDIAKGSLILFESNA 469 (902)
Q Consensus 453 N~~G~~~~s~~L~V~~~ 469 (902)
|..|..+.++.|.|...
T Consensus 322 N~~g~~~~~~~l~V~~~ 338 (361)
T 2xot_A 322 GETFNETLSVELKVYNF 338 (361)
T ss_dssp CSSCEEEEEEEEEEESS
T ss_pred cCCCccEEEEEEEEEee
Confidence 99999999999999653
No 401
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.69 E-value=2e-08 Score=91.29 Aligned_cols=66 Identities=18% Similarity=0.352 Sum_probs=51.5
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCC---cEEEEeeeeecCceeEEeecC
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASS---TLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~---sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+.++.+.+|++++|.|.+.+. |.+.|+|++..+.... +.....++ +|.|.+++.+|+|.|+|.|.|
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 83 (108)
T 2dm7_A 15 LKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGG--RYSLKQDGTRCELQIHDLSVADAGEYSCMCGQ 83 (108)
T ss_dssp CBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSS--SCEEEEETTEEEEEESSCCTTTCSEEEEEETT
T ss_pred CCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCC--CEEEEecCCEEEEEECCCCcccCEEEEEEEcC
Confidence 456789999999999999875 6899999877654322 22222233 499999999999999999977
No 402
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.68 E-value=3.1e-08 Score=89.24 Aligned_cols=68 Identities=24% Similarity=0.344 Sum_probs=53.4
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCC---cEEEEeeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASS---TLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~---sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+.++.+.+|++++|.|.+.+.|.+ +.|+|++..+.... +.....++ +|.|.+++.+|+|.|+|.+.+
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~g~ 84 (103)
T 2e7b_A 14 ALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGD--KYSLRQEGAMLELVVRNLRPQDSGRYSCSFGD 84 (103)
T ss_dssp CCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSS--SEEEEECSSEEEEEECSCCTTTCCCEEEECSS
T ss_pred cCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCC--cEEEEEcCCEEEEEEccCCcccCEEEEEEECC
Confidence 4466889999999999999999988 99999876653322 22233333 599999999999999998655
No 403
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.67 E-value=9.6e-09 Score=103.65 Aligned_cols=91 Identities=10% Similarity=0.040 Sum_probs=67.0
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+.. .+.+|++++|.|.+.+.|. .+.|++++..+.... ...... .....|.|.+++.+|+|.|+
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~----~~~~~~----~~~~~L~i~~v~~~D~G~Y~ 74 (196)
T 2d3v_A 5 KATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDT----QNPLEP----KNKARFSIPSMTEHHAGRYR 74 (196)
T ss_dssp BCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEE----ECCCSS----TTEEEEEESSCCGGGCEEEE
T ss_pred CCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCccc----ccccCC----ccccEEEeccCChhHCeEEE
Confidence 5778777764 7899999999999998876 999999887553210 000000 11346999999999999999
Q ss_pred EEEEeCCcee--EEEEEEEeecC
Q psy12803 449 CISKNEVDIA--KGSLILFESNA 469 (902)
Q Consensus 449 C~A~N~~G~~--~~s~~L~V~~~ 469 (902)
|.|.|..|.. +..+.|.|...
T Consensus 75 C~a~n~~g~~~~s~~~~l~V~~~ 97 (196)
T 2d3v_A 75 CYYYSPAGWSEPSDPLELVVTGF 97 (196)
T ss_dssp EEEEETTEECBCCCCEEEEEECS
T ss_pred EEEeCCCCcCCcCccEEEEecCC
Confidence 9999998754 35577777764
No 404
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.67 E-value=4.1e-08 Score=88.09 Aligned_cols=66 Identities=15% Similarity=0.187 Sum_probs=50.8
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceecc-CCcEEEEeeeeecCceeEEeecC
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVA-SSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~-~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+.+.+|++++|.|.+. .|.+.+.|+|++..+............ ...|.|.+++.+|+|.|+|.|.+
T Consensus 18 ~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ag~ 84 (100)
T 2yuv_A 18 YQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTAGD 84 (100)
T ss_dssp EEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEETT
T ss_pred cEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEECC
Confidence 6788999999999999 699999999988765443322221111 13699999999999999999833
No 405
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.66 E-value=6.7e-09 Score=93.35 Aligned_cols=65 Identities=18% Similarity=0.378 Sum_probs=52.5
Q ss_pred CcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC
Q psy12803 299 SPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
..+.+.+|++++|.|.+.+.| |.+.|+|++..+.... ........|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~---~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 75 (99)
T 2cr3_A 11 ESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESN---RTRITGEEVEVQDSVPADSGLYACVTSS 75 (99)
T ss_dssp EECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCS---SEEECSSEEEETTCCTTTCEEEEEEEEE
T ss_pred cCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCC---cEEEECCEEEEccCCHHHCEEEEEEEEe
Confidence 345688999999999999987 7999999876553322 2222367999999999999999999988
No 406
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=2.3e-08 Score=89.87 Aligned_cols=82 Identities=22% Similarity=0.260 Sum_probs=61.7
Q ss_pred ceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCc
Q psy12803 377 RRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 377 ~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G 456 (902)
.++.+.+|++++|.|.+. .|.+.+.|++++..+.... ++.+..... ..+|.|.+++.+|+|.|+|.|.|
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~--~~~~~~~~~-----~~~L~I~~~~~~D~G~Y~C~a~~--- 87 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSS--KVRVEAVGC-----TRRLVVQQAGQAEAGEYSCEAGG--- 87 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCS--SEEEEEETT-----EEEEEETTCCTTTCSCEEEEETT---
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCC--CEEEEEcCC-----EEEEEECCCCcccCEEEEEEcCC---
Confidence 456789999999999998 8899999999887664433 333332221 24699999999999999999954
Q ss_pred eeEEEEEEEeecCC
Q psy12803 457 IAKGSLILFESNAK 470 (902)
Q Consensus 457 ~~~~s~~L~V~~~p 470 (902)
...++.|.|..++
T Consensus 88 -~~~~~~l~V~~p~ 100 (102)
T 2eo1_A 88 -QQLSFRLQVAGQC 100 (102)
T ss_dssp -EECCEEEEEESCC
T ss_pred -CcEEEEEEEeCCC
Confidence 4566788877653
No 407
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.65 E-value=2.1e-08 Score=102.95 Aligned_cols=86 Identities=16% Similarity=0.238 Sum_probs=69.8
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
..+.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+... .. .+|.|.+++.+|+|.|
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~----------~~------~~L~i~~v~~~d~G~Y 80 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG----------NT------SELIFNAVHVKDAGFY 80 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC----------CS------SEEEETTCCGGGCEEE
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC----------CC------CEEEEccCChhhCeEe
Confidence 4678888899999999999999999999999999999987655321 11 2499999999999999
Q ss_pred EEEEEeCCcee-EEEEEEEeecC
Q psy12803 448 RCISKNEVDIA-KGSLILFESNA 469 (902)
Q Consensus 448 tC~A~N~~G~~-~~s~~L~V~~~ 469 (902)
+|.|.|..+.. +..+.|.|...
T Consensus 81 ~C~~~n~~~~~~s~~~~l~V~~~ 103 (218)
T 3k0w_A 81 VCRVNNNFTFEFSQWSQLDVCDI 103 (218)
T ss_dssp EEEEECTTCCEECCCEEEEEECC
T ss_pred EEEEEcCCCCceeeEEEEEEEcc
Confidence 99999998865 55577777654
No 408
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.65 E-value=1.9e-08 Score=100.56 Aligned_cols=82 Identities=21% Similarity=0.242 Sum_probs=64.2
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.+...+.. .+.+|++++|.|.+.+ |.+.+.|++++... .... ..|.|.+++.+|+|.|
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~-----------~~~~------~~L~i~~v~~~D~G~Y 67 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR-----------YQDQ------AVLFIPAMKRSLAGRY 67 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC-----------EESS------SEEEESSCCGGGCEEE
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc-----------cCcc------cEEEECcCChhhCceE
Confidence 46778777764 7899999999999988 78899999987651 0111 2399999999999999
Q ss_pred EEEEEeCCcee--EEEEEEEeec
Q psy12803 448 RCISKNEVDIA--KGSLILFESN 468 (902)
Q Consensus 448 tC~A~N~~G~~--~~s~~L~V~~ 468 (902)
+|.|.|..|.. +..+.|.|..
T Consensus 68 ~C~a~n~~g~~~~s~~~~l~V~~ 90 (184)
T 2gi7_A 68 RCSYQNGSLWSLPSDQLELVATG 90 (184)
T ss_dssp EEEEEETTEEBCCCCCEEEEEES
T ss_pred EEEEEcCCCccCCCCCEEEEecC
Confidence 99999988743 4556777754
No 409
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.64 E-value=8.8e-08 Score=113.79 Aligned_cols=93 Identities=24% Similarity=0.276 Sum_probs=78.8
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
..|.+...+....+.+|+++.|.|.+.|.|.|+|+|++++..+.. +.++.+..... ..+|.|.++..+|+|.|
T Consensus 481 ~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~--s~~~~i~~~~~-----~~~L~I~~~~~~D~G~Y 553 (573)
T 3uto_A 481 AQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQ--SVKYMKRYNGN-----DYGLTINRVKGDDKGEY 553 (573)
T ss_dssp GSCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCS--SSSEEEEEETT-----EEEEEECSCCGGGCEEE
T ss_pred cCCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEccc--CCcEEEEEcCC-----EEEEEEcCCCcccCcEE
Confidence 578888888889999999999999999999999999998877754 33444443332 34599999999999999
Q ss_pred EEEEEeCCceeEEEEEEEee
Q psy12803 448 RCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~ 467 (902)
+|.|.|..|+.++.+.|.|.
T Consensus 554 t~~A~N~~G~~~~~v~l~Vt 573 (573)
T 3uto_A 554 TVRAKNSYGTKEEIVFLNVT 573 (573)
T ss_dssp EEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEeCCCcEEEEEEEEEC
Confidence 99999999999999999873
No 410
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.64 E-value=3.6e-08 Score=102.00 Aligned_cols=94 Identities=12% Similarity=0.148 Sum_probs=66.5
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+. ..+.+|++|+|.|.+.+ +.+.+.|++++..+..... ... ...... ..+|.|.+++.+|+|.|
T Consensus 8 ~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~-~~~-~~~~~~----~~~L~I~~v~~~D~G~Y 79 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG-RRL-KFWNET----DPEFVIDHMDANKAGRY 79 (218)
T ss_dssp CCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS-EEC-C----C----CCEEEECSCCGGGCEEE
T ss_pred CCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc-ccC-CCCcce----eeEEEEcccccccCEEE
Confidence 4677887776 47899999999999987 6789999998876643221 110 001111 01499999999999999
Q ss_pred EEEEEeCCcee--EEEEEEEeecC
Q psy12803 448 RCISKNEVDIA--KGSLILFESNA 469 (902)
Q Consensus 448 tC~A~N~~G~~--~~s~~L~V~~~ 469 (902)
+|.|.|..|.. +..+.|.|...
T Consensus 80 ~C~a~n~~~~~~~s~~~~l~V~~~ 103 (218)
T 1uct_A 80 QCQYRIGHYRFRYSDTLELVVTGL 103 (218)
T ss_dssp EEEEEETTTEEEECCCEEEEEECS
T ss_pred EEEEEcCCCceeecCCEEEEEcCc
Confidence 99999987643 34567777653
No 411
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.64 E-value=9.8e-09 Score=103.64 Aligned_cols=92 Identities=17% Similarity=0.130 Sum_probs=67.3
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+. ..+.+|++++|.|.+.+.|. .+.|++++..+....... ...... .+|.|.+++.+|+|.|
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~--~~~~~~------~~L~i~~v~~~D~G~Y 73 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIP--QELVKK------GQFPIPSITWEHTGRY 73 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSC--HHHHTT------TEEEESSCCGGGCEEE
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCcccccccccc--ccCCcc------cEEEECCCCHHHCeEE
Confidence 3678877776 47899999999999999876 799999887653211110 001111 2499999999999999
Q ss_pred EEEEEeCC-c--eeEEEEEEEeecC
Q psy12803 448 RCISKNEV-D--IAKGSLILFESNA 469 (902)
Q Consensus 448 tC~A~N~~-G--~~~~s~~L~V~~~ 469 (902)
+|.|.|.. | ..+..+.|.|...
T Consensus 74 ~C~a~n~~~g~~~~s~~~~l~V~~~ 98 (198)
T 1ugn_A 74 RCYYGSDTAGRSESSDPLELVVTGA 98 (198)
T ss_dssp EEEEEETTTEECCCCCCEEEEEECS
T ss_pred EEEEECCCCCcccCCccEEEEEccc
Confidence 99999988 6 3356677888763
No 412
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.64 E-value=4.7e-09 Score=98.02 Aligned_cols=82 Identities=27% Similarity=0.378 Sum_probs=61.5
Q ss_pred CcccccCCcccCCceeecCCcEEEEcCCeEEEEEecCCCCCCc-eEEecCCCcccccCCcccee---c-c---CCcEEEE
Q psy12803 280 TSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPS-IIWKTSENKPITLGSWKDSA---V-A---SSTLNFT 351 (902)
Q Consensus 280 ~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G~P~p~-v~W~k~~~~~~~~~~~~~~~---~-~---~~sL~I~ 351 (902)
.+.+..+|.+.. +..+.+.+|+++.|.|.+.|.|.|. |.|++++..+......+... . . ..+|.|.
T Consensus 8 ~l~V~~~P~i~~------~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~ 81 (122)
T 2cry_A 8 TLTVNGPPIISS------TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTIS 81 (122)
T ss_dssp CCCCCSSCCEEE------ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECT
T ss_pred EEEEecCCCccC------CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEc
Confidence 555666776532 4556789999999999999999998 99999877654321122222 1 1 2389999
Q ss_pred eeeeecC-ceeEEeecC
Q psy12803 352 RINRINM-GAYMCLADN 367 (902)
Q Consensus 352 ~Vt~~Ds-G~YtC~A~N 367 (902)
+++.+|+ |.|+|.|.|
T Consensus 82 ~v~~~D~~G~Y~C~a~N 98 (122)
T 2cry_A 82 NIVRADFQTIYNCTAWN 98 (122)
T ss_dssp TCCHHHHHSCEEEEEEC
T ss_pred CCChhhCCceEEEEEEC
Confidence 9999999 999999999
No 413
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.63 E-value=1.8e-08 Score=95.44 Aligned_cols=63 Identities=21% Similarity=0.265 Sum_probs=49.7
Q ss_pred cCCeEEEEEecCCCCCCceEEecCCCcccccCCccceec--------cCCcEEEEeeeeecCceeEEeecC
Q psy12803 305 EGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAV--------ASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 305 eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~--------~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
.+..+.|.|.+.|+|.|.|+|+|++..+........... ..++|.|.+++.+|+|.|+|+|.|
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N 84 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAAN 84 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEE
Confidence 677899999999999999999998766544332111111 135799999999999999999999
No 414
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.63 E-value=9.5e-08 Score=95.20 Aligned_cols=85 Identities=19% Similarity=0.143 Sum_probs=62.7
Q ss_pred eeeeecCceEEEEEEeec--cCCceEEEEecCCeeee--------cCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 378 RVGVPIGRTATLECEVEA--FPLSVRYWEFIDGTLIE--------HDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 378 ~~~v~~G~~v~L~C~a~g--~P~P~v~W~k~~~~l~~--------~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+.+.+|+++.|.|.... .|.+.|.|++++..+.. ....++.+ ..+++ |.|.+++.+|+|.|
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~--~~~gs------L~I~~v~~~D~G~Y 76 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEI--LANGD------LKIKNLTRDDSGTY 76 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEE--CTTSC------EEESSCCGGGCEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEE--CCCCc------EEEcccccccCEEE
Confidence 467889999999995433 56789999998754431 11223333 12233 99999999999999
Q ss_pred EEEEEeCCcee--EEEEEEEeecCC
Q psy12803 448 RCISKNEVDIA--KGSLILFESNAK 470 (902)
Q Consensus 448 tC~A~N~~G~~--~~s~~L~V~~~p 470 (902)
+|.|.|..|.. +..+.|.|...+
T Consensus 77 ~C~~~n~~g~~~~~~~~~l~V~~~~ 101 (176)
T 1hng_A 77 NVTVYSTNGTRILNKALDLRILEMV 101 (176)
T ss_dssp EEEEEETTCCEEEEEEEEEEEECCC
T ss_pred EEEEEeCCCCEEEEEEEEEEEeCCC
Confidence 99999999986 777888887643
No 415
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.63 E-value=1.5e-08 Score=88.66 Aligned_cols=60 Identities=17% Similarity=0.314 Sum_probs=48.7
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEee-eeecCceeEEeecC
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRI-NRINMGAYMCLADN 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~V-t~~DsG~YtC~A~N 367 (902)
++..++.+|++|+|.|.+.|.|. |+|+|++..+.. . .+++|+|.+| +.+|+|.|+|.|.+
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~-~-------~~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQ-K-------HDKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTT-C-------CSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcC-C-------CCCEEEECccCccCcCEEEEEEEcc
Confidence 44567889999999999999883 999997765421 1 4568999996 78999999999975
No 416
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.62 E-value=1.9e-08 Score=92.82 Aligned_cols=71 Identities=31% Similarity=0.560 Sum_probs=53.4
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCC---ccceeccCCcEEEE-----eeeeecCceeEEeecC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGS---WKDSAVASSTLNFT-----RINRINMGAYMCLADN 367 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~---~~~~~~~~~sL~I~-----~Vt~~DsG~YtC~A~N 367 (902)
.+.++.+.+|++++|.|.+.|.|.|.++|+|++..+..... .......++.+.+. +++.+|+|.|+|.|.|
T Consensus 15 ~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~C~a~N 93 (117)
T 2v9t_A 15 HPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARN 93 (117)
T ss_dssp CCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEEEEEEE
T ss_pred CCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEEEEEEe
Confidence 45678899999999999999999999999998765543221 12233344444444 5589999999999999
No 417
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.62 E-value=4.6e-08 Score=112.95 Aligned_cols=85 Identities=20% Similarity=0.318 Sum_probs=67.7
Q ss_pred cCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecC-CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEe
Q psy12803 375 RNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHD-GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKN 453 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~-~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N 453 (902)
.+..+.+.+|++++|.|.+.|.|.|.|.|++++..+.... ..++.+ ...++ |.|.+++.+|+|.|+|+|.|
T Consensus 391 ~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~--~~~~~------L~i~~v~~~d~G~Y~C~a~N 462 (477)
T 2id5_A 391 KAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTV--FPDGT------LEVRYAQVQDNGTYLCIAAN 462 (477)
T ss_dssp SCEEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEE--CTTSC------EEESSCCSTTCEEEEEEEEE
T ss_pred ccccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEe--CCCCE------EEEeeCChHHCEEEEEEEEe
Confidence 4567889999999999999999999999999887764321 122222 22233 99999999999999999999
Q ss_pred CCceeEEEEEEEee
Q psy12803 454 EVDIAKGSLILFES 467 (902)
Q Consensus 454 ~~G~~~~s~~L~V~ 467 (902)
..|.++.++.|.|.
T Consensus 463 ~~g~~~~~~~l~V~ 476 (477)
T 2id5_A 463 AGGNDSMPAHLHVR 476 (477)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEe
Confidence 99999999999886
No 418
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.62 E-value=2.3e-08 Score=88.79 Aligned_cols=67 Identities=18% Similarity=0.344 Sum_probs=52.8
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCC
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNV 368 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~ 368 (902)
.+.++.+.+|+++.|.|.+.+ .|.+.|+|++..+... ......+++|.|.+++.+|+|.|+|.|.|.
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~---~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 73 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPN---NRTVLIGEYLQIKGATPRDSGLYACTAART 73 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCC---SSEEEETTEEEECSCCGGGCEEEEEEEECS
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCC---ceEEEeCCEEEECcCCcccCEEEEEEEccC
Confidence 455678999999999999997 4799999977654322 123334678999999999999999999983
No 419
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.61 E-value=2.9e-08 Score=93.06 Aligned_cols=71 Identities=24% Similarity=0.415 Sum_probs=55.0
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCCccccc------CCccceec----cCCcEEEEeeeeecCceeEEeecC
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITL------GSWKDSAV----ASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~------~~~~~~~~----~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+.++.+.+|++|+|.|.+.+.|.+.+.|++.+..++.. ...+.... ...+|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 87 (124)
T 3rbg_A 8 TETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYS 87 (124)
T ss_dssp EEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEES
T ss_pred CccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEc
Confidence 44578999999999999999999999999877654321 11122221 235899999999999999999988
Q ss_pred C
Q psy12803 368 V 368 (902)
Q Consensus 368 ~ 368 (902)
.
T Consensus 88 ~ 88 (124)
T 3rbg_A 88 D 88 (124)
T ss_dssp S
T ss_pred C
Confidence 5
No 420
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.61 E-value=2.7e-07 Score=87.96 Aligned_cols=96 Identities=15% Similarity=0.125 Sum_probs=65.8
Q ss_pred EEcCceeeeecCceEEEEEEeeccCC---ceEEEEecCCe--eee-cC------------CceEEEeecCCCceeeEeEE
Q psy12803 373 LIRNRRVGVPIGRTATLECEVEAFPL---SVRYWEFIDGT--LIE-HD------------GVKYSISDVDKGSYQYIMQL 434 (902)
Q Consensus 373 ~~~p~~~~v~~G~~v~L~C~a~g~P~---P~v~W~k~~~~--l~~-~~------------~~~~~~~~~~~~s~~~~stL 434 (902)
...+..+.+.+|++++|.|.+.+.+. +.|.|++.+.. +.. .. ..++.+.... ......+|
T Consensus 10 ~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~--~~~~~~sL 87 (139)
T 1pko_A 10 IGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKES--IGEGKVAL 87 (139)
T ss_dssp ECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTT--GGGTEEEE
T ss_pred ECCCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEcccc--ccCCeEEE
Confidence 33455678999999999999987653 68999987641 110 00 1122221110 00113569
Q ss_pred EEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCC
Q psy12803 435 NISNVNISDFDTYRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 435 ~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
.|.+++.+|+|.|+|.+.|..+..+..+.|.|..+.
T Consensus 88 ~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~P~ 123 (139)
T 1pko_A 88 RIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVEDPF 123 (139)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECTT
T ss_pred EEccCCHHHCEEEEEEEEcCCCceEEEEEEEEecCc
Confidence 999999999999999999999988899999998543
No 421
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.61 E-value=7.4e-08 Score=88.38 Aligned_cols=68 Identities=16% Similarity=0.281 Sum_probs=52.6
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCC---cEEEEeeeeecCceeEEeecC
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASS---TLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~---sL~I~~Vt~~DsG~YtC~A~N 367 (902)
..+.++.+.+|+++.|.|.+.+. |.+.|+|++..+.... +.....++ .|.|.+++.+|+|.|+|.|.+
T Consensus 24 ~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 94 (113)
T 2edh_A 24 EGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGD--RHSLRQDGARCELQIRGLVAEDAGEYLCMCGK 94 (113)
T ss_dssp ECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSS--SEEEEEETTEEEEEECSCCSTTCEEEEEEETT
T ss_pred ccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCC--cEEEEECCCEEEEEECCCChhhCEEEEEEeCC
Confidence 34567889999999999999875 7899999877654332 22223333 799999999999999999844
No 422
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=3.2e-08 Score=88.97 Aligned_cols=67 Identities=16% Similarity=0.322 Sum_probs=52.9
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccC---CcEEEEeeeeecCceeEEeecC
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVAS---STLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~---~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+.++.+.+|++++|.|.+. .|.+.+.|+|++..+..... .....+ ..|+|.+++.+|+|.|+|.|.|
T Consensus 18 ~~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~--~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~ 87 (102)
T 2eo1_A 18 HREVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSSK--VRVEAVGCTRRLVVQQAGQAEAGEYSCEAGG 87 (102)
T ss_dssp CEEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCSS--EEEEEETTEEEEEETTCCTTTCSCEEEEETT
T ss_pred cccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCCC--EEEEEcCCEEEEEECCCCcccCEEEEEEcCC
Confidence 3457899999999999998 89999999998766543322 222222 4899999999999999999976
No 423
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.60 E-value=4.9e-08 Score=89.38 Aligned_cols=65 Identities=15% Similarity=0.312 Sum_probs=51.1
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccC--CcEEEEeeeeecCceeEEeecC
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVAS--STLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~--~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+.+.+|+++.|.|.+. .|.+.+.|+|++..+...... ...... .+|.|.+++.+|+|.|+|.|.|
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 89 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPAL-LLQKEDTVRRLVLPAVQLEDSGEYLCEIDD 89 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTB-EEEECSSEEEEEESSCCTTTCEEEEEESSS
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCE-EEEECCCEEEEEECCCCcccCEEEEEEEec
Confidence 6788999999999996 789999999977654432221 112222 4899999999999999999988
No 424
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.58 E-value=6e-08 Score=97.84 Aligned_cols=90 Identities=16% Similarity=0.125 Sum_probs=64.7
Q ss_pred EcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeec-----------------CCceEEEeecCCCceeeEeEEEE
Q psy12803 374 IRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEH-----------------DGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 374 ~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~-----------------~~~~~~~~~~~~~s~~~~stL~I 436 (902)
+.+..+.+.+|+++.|.|.+.+.|.+.+.|++++...... ...++.+. .+. +|.|
T Consensus 4 i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~--~~~------~L~i 75 (208)
T 3r4d_A 4 IEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIY--SNG------SLLF 75 (208)
T ss_dssp EEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEEC--TTS------CEEE
T ss_pred ccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEe--cCC------eEEE
Confidence 3444567899999999999888899999998764321110 01111111 122 3999
Q ss_pred eccCCCCCeEEEEEEEeCC-ceeEEEEEEEeecCCC
Q psy12803 437 SNVNISDFDTYRCISKNEV-DIAKGSLILFESNAKT 471 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~-G~~~~s~~L~V~~~p~ 471 (902)
.+++.+|+|.|+|.+.|.. +.....+.|.|...+.
T Consensus 76 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~ 111 (208)
T 3r4d_A 76 QMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVT 111 (208)
T ss_dssp CSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCC
T ss_pred ccccccCCeEEEEEEEcccCceeEEEEEEEeccCCC
Confidence 9999999999999999985 6677888888876544
No 425
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.58 E-value=1.4e-07 Score=96.78 Aligned_cols=87 Identities=16% Similarity=0.139 Sum_probs=62.1
Q ss_pred CEEEEcCceeeeecCceEEEEEEeec-cCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 370 PQILIRNRRVGVPIGRTATLECEVEA-FPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 370 P~i~~~p~~~~v~~G~~v~L~C~a~g-~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
|.|... .++.+.+|+.+.|.|.+.+ .|.|.|.|++++..+......++.. ....+ ..+|.|.+++.+|+|.|+
T Consensus 4 p~~~~~-~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~-~~~~g----~~~L~I~~v~~~D~G~Y~ 77 (207)
T 3rbs_A 4 PFTKSE-LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHI-DRNTG----IIEMFMEKLQDEDEGTYT 77 (207)
T ss_dssp --CCEE-EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEE-CTTTC----EEEEEESCCCGGGCEEEE
T ss_pred CeeecC-CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEE-eCCCC----EEEEEECCCChhhCEEEE
Confidence 445443 3578999999999999974 7999999999988775544333332 11111 245999999999999999
Q ss_pred EEEEeCCceeEEEEEE
Q psy12803 449 CISKNEVDIAKGSLIL 464 (902)
Q Consensus 449 C~A~N~~G~~~~s~~L 464 (902)
|.|.| |.+...+.+
T Consensus 78 C~a~N--g~a~~~~~~ 91 (207)
T 3rbs_A 78 FQLQD--GKATNHSTV 91 (207)
T ss_dssp EEEEE--TTEEEEEEE
T ss_pred EEEEC--CCeEEEEEE
Confidence 99999 555444444
No 426
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.57 E-value=4.1e-08 Score=88.60 Aligned_cols=73 Identities=15% Similarity=0.254 Sum_probs=54.0
Q ss_pred ecCCcEEEEcCCeEEEEEecCC--CCCCceEEecCCCcccccCC---ccceec------cCCcEEEEeeeeecCceeEEe
Q psy12803 296 FSSSPIVVREGDNVRLRCVATG--HPKPSIIWKTSENKPITLGS---WKDSAV------ASSTLNFTRINRINMGAYMCL 364 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G--~P~p~v~W~k~~~~~~~~~~---~~~~~~------~~~sL~I~~Vt~~DsG~YtC~ 364 (902)
..+.++.+.+|++++|.|.+.+ .+.+.+.|+|++..+..... .+.... ..++|.|.+++.+|+|.|+|.
T Consensus 15 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 94 (112)
T 3so5_A 15 VQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCV 94 (112)
T ss_dssp ECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEE
T ss_pred eCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEE
Confidence 3456688999999999999985 45689999998765432211 011111 136899999999999999999
Q ss_pred ecCC
Q psy12803 365 ADNV 368 (902)
Q Consensus 365 A~N~ 368 (902)
|.|.
T Consensus 95 a~n~ 98 (112)
T 3so5_A 95 ISNH 98 (112)
T ss_dssp EEET
T ss_pred EEeC
Confidence 9883
No 427
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.56 E-value=4.6e-08 Score=90.61 Aligned_cols=79 Identities=20% Similarity=0.296 Sum_probs=55.3
Q ss_pred cccccCCcccCCceeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcccee-----ccCCcEEEEeeee
Q psy12803 281 SQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA-----VASSTLNFTRINR 355 (902)
Q Consensus 281 ~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~-----~~~~sL~I~~Vt~ 355 (902)
+.+.++|.+..... .. ..+.+.|.|.+.|+|.|.++|+|++..+.......... ...++|.|.+++.
T Consensus 3 L~V~~pP~i~~~~~------~~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 74 (118)
T 1wwc_A 3 LTVYYPPRVVSLEE------PE--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTH 74 (118)
T ss_dssp -CCCCCCCCCCCCC------CC--CCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCG
T ss_pred EEEecCCceeccCC------Ce--eccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCCh
Confidence 45666776643321 11 22667899999999999999999876654433222111 1345899999999
Q ss_pred ecCceeEEeecC
Q psy12803 356 INMGAYMCLADN 367 (902)
Q Consensus 356 ~DsG~YtC~A~N 367 (902)
+|+|.|+|.|.|
T Consensus 75 ~d~G~Y~C~a~N 86 (118)
T 1wwc_A 75 YNNGNYTLIAKN 86 (118)
T ss_dssp GGCEEEEEEEEE
T ss_pred hcCEEEEEEEEC
Confidence 999999999998
No 428
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.56 E-value=1.7e-07 Score=86.42 Aligned_cols=92 Identities=21% Similarity=0.268 Sum_probs=63.9
Q ss_pred cCceeeeecCceEEEEEEeeccCC----ceEEEEecCC-------eeee-cC-----------CceEEEeecCCCceeeE
Q psy12803 375 RNRRVGVPIGRTATLECEVEAFPL----SVRYWEFIDG-------TLIE-HD-----------GVKYSISDVDKGSYQYI 431 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~P~----P~v~W~k~~~-------~l~~-~~-----------~~~~~~~~~~~~s~~~~ 431 (902)
.+..+.+.+|++++|.|.+.+.+. +.+.|++.+. .+.. .. ..++.+.... .....
T Consensus 11 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~ 88 (126)
T 1eaj_A 11 PEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSND--LKSGD 88 (126)
T ss_dssp SEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSC--GGGTB
T ss_pred CCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEccc--ccCCe
Confidence 445678999999999999987764 4599998752 1111 11 1122221110 00012
Q ss_pred eEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeec
Q psy12803 432 MQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESN 468 (902)
Q Consensus 432 stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~ 468 (902)
.+|.|.+++.+|+|.|+|.+.|..+.....+.|.|..
T Consensus 89 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 89 ASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEEEc
Confidence 4599999999999999999999999888999998864
No 429
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.56 E-value=2.7e-07 Score=84.37 Aligned_cols=96 Identities=14% Similarity=0.134 Sum_probs=62.2
Q ss_pred cCceeeeecCceEEEEEEee-ccCCc----eEEEEecCCee---eec--------CCceEEEeecCCCceeeEeEEEEec
Q psy12803 375 RNRRVGVPIGRTATLECEVE-AFPLS----VRYWEFIDGTL---IEH--------DGVKYSISDVDKGSYQYIMQLNISN 438 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~-g~P~P----~v~W~k~~~~l---~~~--------~~~~~~~~~~~~~s~~~~stL~I~~ 438 (902)
.+..+.+.+|++++|.|.+. +.+.+ .+.|++.+... ... ...++.+............+|.|.+
T Consensus 6 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 85 (118)
T 3udw_C 6 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFG 85 (118)
T ss_dssp CCSEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECS
T ss_pred CCCeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEee
Confidence 34457899999999999994 44444 49999874221 100 0122222211000000033599999
Q ss_pred cCCCCCeEEEEEEEe-CCceeEEEEEEEeecCC
Q psy12803 439 VNISDFDTYRCISKN-EVDIAKGSLILFESNAK 470 (902)
Q Consensus 439 V~~~DsG~YtC~A~N-~~G~~~~s~~L~V~~~p 470 (902)
++.+|+|.|+|.+.| ..+.....+.|.|..+|
T Consensus 86 v~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~~~P 118 (118)
T 3udw_C 86 LRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKP 118 (118)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred cChHHCeEEEEEEEECCCCCccceEEEEEEeCC
Confidence 999999999999999 88888888999887643
No 430
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.97 E-value=7.7e-09 Score=104.87 Aligned_cols=143 Identities=13% Similarity=0.147 Sum_probs=84.0
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCC----ccc-cc-------CCccceec-----cCCcEEEEeeeeecCce
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN----KPI-TL-------GSWKDSAV-----ASSTLNFTRINRINMGA 360 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~----~~~-~~-------~~~~~~~~-----~~~sL~I~~Vt~~DsG~ 360 (902)
+..+.+.+|++|+|.|.+.+.+.+.+.|+|... ..+ .. ...+.... ...+|+|.+++.+|+|.
T Consensus 7 p~~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~sL~I~~v~~~DsG~ 86 (185)
T 3c6l_A 7 PQSLTVWEGETAILNCSYEDSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQPGDSAT 86 (185)
Confidence 456789999999999999876666899998642 111 10 01122211 23479999999999999
Q ss_pred eEEeecCC------CCEEEEcC------ceeee--ecCceEEEEEEeec-cCCceEEEEecCCeeeecCCceEEEeecCC
Q psy12803 361 YMCLADNV------PPQILIRN------RRVGV--PIGRTATLECEVEA-FPLSVRYWEFIDGTLIEHDGVKYSISDVDK 425 (902)
Q Consensus 361 YtC~A~N~------~P~i~~~p------~~~~v--~~G~~v~L~C~a~g-~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~ 425 (902)
|.|.+.+. .-.+.+.. ..+.+ ...+.++|.|.+.+ +|.|.|.|......+ ..+.......
T Consensus 87 Y~C~~~~~~~~fg~gT~L~V~~~~~~~~P~V~~~~~~~~~vtL~C~~~gf~P~p~v~~~~~~~~~-~~~~~~~~~~---- 161 (185)
T 3c6l_A 87 YFCAASDNRIFFGDGTQLVVKPNIQNPEPAVYQLKDPRSQDSTLCLFTDFDSQINVPKTMESGTF-ITDKTVLDMK---- 161 (185)
Confidence 99998650 00111100 01111 11227899999988 589999996544333 2222211111
Q ss_pred CceeeEeEEEEeccCCCCCe-EEEEE
Q psy12803 426 GSYQYIMQLNISNVNISDFD-TYRCI 450 (902)
Q Consensus 426 ~s~~~~stL~I~~V~~~DsG-~YtC~ 450 (902)
.+.|.+..+..=|.+ +++|.
T Consensus 162 -----~~~~~~~~~~~w~~~~~~~c~ 182 (185)
T 3c6l_A 162 -----AMDSKSNGAIAWSNQTSFTCQ 182 (185)
Confidence 223666666544444 66674
No 431
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.55 E-value=1.6e-07 Score=87.11 Aligned_cols=70 Identities=9% Similarity=0.051 Sum_probs=54.0
Q ss_pred eeecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCc--------cceeccCC---cEEEEeeeeecCceeE
Q psy12803 294 HIFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSW--------KDSAVASS---TLNFTRINRINMGAYM 362 (902)
Q Consensus 294 ~i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~--------~~~~~~~~---sL~I~~Vt~~DsG~Yt 362 (902)
++..+.++.+.+|++++|.|.+++ .+.++|+|++..+...... +.....++ +|+|.+++.+|+|.|+
T Consensus 11 ~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~ 88 (112)
T 2e6q_A 11 LVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALV 88 (112)
T ss_dssp EEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEE
T ss_pred EecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEE
Confidence 345678899999999999999998 6789999988776544310 33333333 7999999999999997
Q ss_pred E-ee
Q psy12803 363 C-LA 365 (902)
Q Consensus 363 C-~A 365 (902)
| .+
T Consensus 89 ~~~~ 92 (112)
T 2e6q_A 89 GFSC 92 (112)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7 44
No 432
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.55 E-value=2.9e-07 Score=112.27 Aligned_cols=158 Identities=11% Similarity=0.151 Sum_probs=98.5
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceE-Ee--cCCCcccccCCcccee--ccCCcEEEEeeeeecCceeEEeecCC---
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSII-WK--TSENKPITLGSWKDSA--VASSTLNFTRINRINMGAYMCLADNV--- 368 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~-W~--k~~~~~~~~~~~~~~~--~~~~sL~I~~Vt~~DsG~YtC~A~N~--- 368 (902)
.+.++.+.+|++++|.|.+.|.|.|.+. |+ +++..+.. ....... ...++|.|.+++.+|+|.|+|.|.|.
T Consensus 170 ~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~-~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~ 248 (731)
T 2v5y_A 170 RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPL-KEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGV 248 (731)
T ss_dssp CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEE-EEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEE
T ss_pred cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccc-cceEEeccccceEEEEEcccccccCeEEEEEEECCCCC
Confidence 4567899999999999999999999998 88 55544322 1111110 11358999999999999999999991
Q ss_pred ----CCEEEE--cC-----ceeeeecCceEEEEEEeecc----CCc--eEEEEecCCeeeecCCceEEEeecCCCceeeE
Q psy12803 369 ----PPQILI--RN-----RRVGVPIGRTATLECEVEAF----PLS--VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYI 431 (902)
Q Consensus 369 ----~P~i~~--~p-----~~~~v~~G~~v~L~C~a~g~----P~P--~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~ 431 (902)
...+.+ .+ ..........+.|.|..... |.. .|.|...+... . .+.....
T Consensus 249 ~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~-----~--~~~~~~~------ 315 (731)
T 2v5y_A 249 GISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSW-----N--DRQPVDS------ 315 (731)
T ss_dssp EECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSC-----E--EEEECCS------
T ss_pred cceeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCc-----e--EEeccCc------
Confidence 111111 11 11222334678888875322 211 45664432211 1 1111111
Q ss_pred eEEEEeccCCCCCeEEEEEEE--eCCceeEEEEEEEeec
Q psy12803 432 MQLNISNVNISDFDTYRCISK--NEVDIAKGSLILFESN 468 (902)
Q Consensus 432 stL~I~~V~~~DsG~YtC~A~--N~~G~~~~s~~L~V~~ 468 (902)
.++.|.++...+...|+|.|. |..|....+..+.+..
T Consensus 316 ~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t 354 (731)
T 2v5y_A 316 TSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRT 354 (731)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEEC
T ss_pred ceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeee
Confidence 248999999999889999999 9998775444344443
No 433
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.53 E-value=1.6e-07 Score=84.55 Aligned_cols=67 Identities=15% Similarity=0.373 Sum_probs=52.4
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCC---cEEEEeeeeecCceeEEeec
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASS---TLNFTRINRINMGAYMCLAD 366 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~---sL~I~~Vt~~DsG~YtC~A~ 366 (902)
.+.++.+.+|++++|.|.+ +.|.+.|.|+|++..+..... .....++ .|.|.+++.+|+|.|+|.+.
T Consensus 14 ~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~--~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~g 83 (103)
T 2dku_A 14 ELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRASGK--HQPSQEGLTLRLTISALEKADSDTYTCDIG 83 (103)
T ss_dssp CCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSSSS--EEEEEETTEEEEEEESCCTTTCSEEEEECS
T ss_pred cCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCCCe--EEEEeCCCEEEEEECCCCcccCEEEEEEeC
Confidence 4567889999999999994 789999999998876543322 2222233 89999999999999999843
No 434
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.52 E-value=8.9e-08 Score=96.38 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=67.4
Q ss_pred EEcCceeeeecCceEEEEEEeeccC----CceEEEEecCCe-------ee-ecC-----------CceEEEeecCCCcee
Q psy12803 373 LIRNRRVGVPIGRTATLECEVEAFP----LSVRYWEFIDGT-------LI-EHD-----------GVKYSISDVDKGSYQ 429 (902)
Q Consensus 373 ~~~p~~~~v~~G~~v~L~C~a~g~P----~P~v~W~k~~~~-------l~-~~~-----------~~~~~~~~~~~~s~~ 429 (902)
...+..+.+.+|+++.|.|.+.+.| .+.+.|++.+.. +. ... ..++.+... ....
T Consensus 4 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~ 81 (214)
T 3jz7_A 4 TTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSN--DVKS 81 (214)
T ss_dssp --CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCS--CGGG
T ss_pred ecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEecc--CccC
Confidence 3445667899999999999999887 469999884311 11 011 111221110 0000
Q ss_pred eEeEEEEeccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCCC
Q psy12803 430 YIMQLNISNVNISDFDTYRCISKNEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 430 ~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~~ 472 (902)
...+|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..++..
T Consensus 82 ~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~ 124 (214)
T 3jz7_A 82 GDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSG 124 (214)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBS
T ss_pred CcccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCC
Confidence 1234999999999999999999999999999999999876554
No 435
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.52 E-value=2.4e-07 Score=88.44 Aligned_cols=93 Identities=14% Similarity=0.117 Sum_probs=64.0
Q ss_pred EEEEcCceeeeecCceEEEEEEeeccCCceEEEEecC--Ce--eeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 371 QILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFID--GT--LIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 371 ~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~--~~--l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
.+...+..+.+.+|++++|.|.+.+. +.+.|+++. .. ++.....++.+.... ...+|.|.+++.+|+|.
T Consensus 19 ~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~-----~~~~L~I~~~~~~DsG~ 91 (133)
T 3khq_A 19 QIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNG-----SVYTLTIQNIQYEDNGI 91 (133)
T ss_dssp SEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEET-----TEEEEEECSCCGGGCEE
T ss_pred ceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCC-----CEEEEEECCCChHHCEE
Confidence 45566778889999999999999987 899999873 21 222233444443322 13569999999999999
Q ss_pred EEEEEEeCCce----eEEEEEEEeecCC
Q psy12803 447 YRCISKNEVDI----AKGSLILFESNAK 470 (902)
Q Consensus 447 YtC~A~N~~G~----~~~s~~L~V~~~p 470 (902)
|.|.|.|..|. ......|.|...+
T Consensus 92 Y~C~a~n~~g~~~~~~g~gt~L~V~~~p 119 (133)
T 3khq_A 92 YFCKQKCDSANHNVTDSCGTELLVLGFS 119 (133)
T ss_dssp EEEEESSCC-------CCCEEEEEC---
T ss_pred EEEEEEeCCCCcceeECCCEEEEEEecc
Confidence 99999998763 2345677777643
No 436
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.50 E-value=1e-07 Score=94.26 Aligned_cols=81 Identities=15% Similarity=0.193 Sum_probs=64.6
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCce-EEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSV-RYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~-v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
.+|.+...+..+.+.+|++++|.|.+.+.|.+. +.|++++..+.. .. .+|.|.+++.+|+|.
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~-----------~~------~~L~i~~~~~~d~G~ 68 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS-----------QA------SSYFIDAATVNDSGE 68 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES-----------SC------SEEEESSCCGGGCEE
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC-----------Cc------eEEEEeCCCcccCEE
Confidence 467888888888899999999999999998876 789988765532 11 249999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEee
Q psy12803 447 YRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 447 YtC~A~N~~G~~~~s~~L~V~ 467 (902)
|+|.|.|..++. .+.|.|.
T Consensus 69 Y~C~~~n~~~s~--~~~l~V~ 87 (175)
T 1fnl_A 69 YRCQTNLSTLSD--PVQLEVH 87 (175)
T ss_dssp EEEECSSSCCCC--CEEEEEE
T ss_pred EEEEeeCCcccc--cEEEEEe
Confidence 999999976644 4555555
No 437
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.50 E-value=7.3e-08 Score=96.63 Aligned_cols=90 Identities=16% Similarity=0.096 Sum_probs=65.0
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.|...+.. .+.+|++|+|.|.+.+. .+.+.|++++..+....... .......+|.|.+++.+|+|.|+
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~--------~~~~~~~~L~I~~v~~~D~G~Y~ 73 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKP--------PERINKVKFYIPDMNSRMAGQYS 73 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSS--------CTTCCEEEEEESSCCGGGCEEEE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCccccccccc--------CCCcceeEEEeCcCCcccCeEEE
Confidence 5778877766 78999999999998764 47899998876654211100 00112346999999999999999
Q ss_pred EEEEeCCcee--EEEEEEEeec
Q psy12803 449 CISKNEVDIA--KGSLILFESN 468 (902)
Q Consensus 449 C~A~N~~G~~--~~s~~L~V~~ 468 (902)
|.|.|..+.. +..+.|.|..
T Consensus 74 C~~~~~~~~~~~s~~~~l~V~~ 95 (188)
T 1oll_A 74 CIYRVGELWSEPSNLLDLVVTE 95 (188)
T ss_dssp EEEEETTEECCCCCCEEEEEES
T ss_pred EEecCCCCCCCCCCceEEEecc
Confidence 9999976543 4566777765
No 438
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.50 E-value=5.1e-07 Score=84.01 Aligned_cols=90 Identities=16% Similarity=0.252 Sum_probs=63.0
Q ss_pred cCceeeeecCceEEEEEEeec--cCCceEEEEecCCeeeec-C----------CceEEEeecCCCceeeEeEEEEeccCC
Q psy12803 375 RNRRVGVPIGRTATLECEVEA--FPLSVRYWEFIDGTLIEH-D----------GVKYSISDVDKGSYQYIMQLNISNVNI 441 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g--~P~P~v~W~k~~~~l~~~-~----------~~~~~~~~~~~~s~~~~stL~I~~V~~ 441 (902)
.+..+.+.+|++++|.|.+.+ .+...|.|++.+..+... . ..++.+ ..+ .+|.|.+++.
T Consensus 9 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~--~~~------~sL~I~~v~~ 80 (117)
T 3q0h_A 9 TTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAP--GPG------LGLTLQSLTV 80 (117)
T ss_dssp ESCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEE--CST------TCEEECSCCG
T ss_pred ccCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEe--CCc------eEEEEeeCCh
Confidence 345578999999999999987 334579999876433211 0 112222 112 2499999999
Q ss_pred CCCeEEEEEEE-eCCceeEEEEEEEeecCCCC
Q psy12803 442 SDFDTYRCISK-NEVDIAKGSLILFESNAKTP 472 (902)
Q Consensus 442 ~DsG~YtC~A~-N~~G~~~~s~~L~V~~~p~~ 472 (902)
+|+|.|+|.+. +..|..+..+.|.|..+|.+
T Consensus 81 ~D~G~Y~C~v~~~~~g~~~~~~~L~V~~pp~~ 112 (117)
T 3q0h_A 81 NDTGEYFCIYHTYPDGTYTGRIFLEVLESSVA 112 (117)
T ss_dssp GGCEEEEEEEEEETTCCEEEEEEEEEECC---
T ss_pred hhCEEEEEEEEECCCCCeEEEEEEEEEccCcc
Confidence 99999999975 46788899999999877654
No 439
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.50 E-value=1.3e-07 Score=96.65 Aligned_cols=84 Identities=14% Similarity=0.173 Sum_probs=65.6
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCce-EEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSV-RYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDT 446 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~-v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~ 446 (902)
..|.+...+....+.+|++++|.|.+.+.|.+. +.|++++..+.... .+|.|.+++.+|+|.
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~-----------------~~L~i~~v~~~D~G~ 68 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA-----------------SSYFIDAATVDDSGE 68 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS-----------------SEEEESSCCGGGCEE
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc-----------------cEEEEecccccCCEE
Confidence 356777778778899999999999999998876 99999876553211 249999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEeecCC
Q psy12803 447 YRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 447 YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
|+|.|.|... +..+.|.|...+
T Consensus 69 Y~C~a~n~~~--s~~~~l~V~~~p 90 (204)
T 3sgj_C 69 YRCQTQLSTL--SDPVQLEVHIGW 90 (204)
T ss_dssp EEEEETTSBC--CCCEEEEEECSS
T ss_pred EEEEeCCCcc--cccEEEEEecCc
Confidence 9999998543 445666666443
No 440
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.49 E-value=4.2e-07 Score=85.74 Aligned_cols=91 Identities=18% Similarity=0.215 Sum_probs=63.9
Q ss_pred EEEcCceeeeecCceEEEEEEeec---cCCceEEEEecCCee----eec----------------------CC--ceEEE
Q psy12803 372 ILIRNRRVGVPIGRTATLECEVEA---FPLSVRYWEFIDGTL----IEH----------------------DG--VKYSI 420 (902)
Q Consensus 372 i~~~p~~~~v~~G~~v~L~C~a~g---~P~P~v~W~k~~~~l----~~~----------------------~~--~~~~~ 420 (902)
+...+..+.+.+|++|+|.|.+.. .+.+.|.|++..... +.. .. .++.+
T Consensus 7 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~ 86 (135)
T 1xt5_A 7 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 86 (135)
T ss_dssp EECSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEE
T ss_pred EeCCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEE
Confidence 344566788999999999999864 577899999876431 110 00 12222
Q ss_pred eecCCCceeeEeEEEEeccCCCCCeEEEEEEEeC-----CceeEEEEEEEeec
Q psy12803 421 SDVDKGSYQYIMQLNISNVNISDFDTYRCISKNE-----VDIAKGSLILFESN 468 (902)
Q Consensus 421 ~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~-----~G~~~~s~~L~V~~ 468 (902)
.... ..+|.|.+++.+|+|.|.|.+.|. .|....++.|.|..
T Consensus 87 ~~~~------~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g 133 (135)
T 1xt5_A 87 ANLA------APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG 133 (135)
T ss_dssp SCTT------SCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEET
T ss_pred ecCC------CCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEec
Confidence 1111 135999999999999999999994 56677888888865
No 441
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.49 E-value=1.6e-07 Score=90.38 Aligned_cols=73 Identities=18% Similarity=0.333 Sum_probs=54.1
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCCCCceEEecCCCccccc------CCccceec----cCCcEEEEeeeeecCceeEEee
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITL------GSWKDSAV----ASSTLNFTRINRINMGAYMCLA 365 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~------~~~~~~~~----~~~sL~I~~Vt~~DsG~YtC~A 365 (902)
..+.++++.+|++++|.|.+.+.|.+.+.|++.+...+.. ...+.... .+.+|+|.+++.+|+|.|+|.+
T Consensus 43 ~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 122 (145)
T 1z9m_A 43 PWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCSI 122 (145)
T ss_dssp CBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEECSSEEEEEECSCCGGGCEEEEEEE
T ss_pred cCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecCCCCeEEEEECCCChhhCEEEEEEE
Confidence 3566789999999999999999998999999643322111 11111111 2458999999999999999999
Q ss_pred cCC
Q psy12803 366 DNV 368 (902)
Q Consensus 366 ~N~ 368 (902)
.|.
T Consensus 123 ~n~ 125 (145)
T 1z9m_A 123 FTM 125 (145)
T ss_dssp CSS
T ss_pred EcC
Confidence 885
No 442
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=98.48 E-value=1.3e-06 Score=91.32 Aligned_cols=152 Identities=18% Similarity=0.303 Sum_probs=91.8
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCC--Ccc---cccCC-------ccceec---cCCcEEEEeeeeecCceeE
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSE--NKP---ITLGS-------WKDSAV---ASSTLNFTRINRINMGAYM 362 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~--~~~---~~~~~-------~~~~~~---~~~sL~I~~Vt~~DsG~Yt 362 (902)
|..+.+..|++|+|.|.+...-...+.|++.. ..+ +-... .++.-. .+-+|+|.+++.+|++.|.
T Consensus 8 P~sls~s~G~~vtisC~~S~~i~~y~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~Sgt~ftLtIs~lq~eD~A~Yy 87 (259)
T 4f9l_D 8 PSSLSASLGDTITITCHASQNINLWLSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSGSATGFTLTISSLQPEDIATYY 87 (259)
T ss_dssp CSBCCBCTTCEEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGGCEEEE
T ss_pred CCeEEECCCCCEEEEEEcCCCCCCCEEEEEECCCCCCEEEEECCCccCCCCCCCEEeeccCCeEEEEEcccChhhCEEEE
Confidence 55677889999999999876444458898642 211 10000 111111 1226999999999999999
Q ss_pred EeecC-C-----------------CCEEEE-------------------cCceeeeecCceEEEEEEeeccCCc--eEEE
Q psy12803 363 CLADN-V-----------------PPQILI-------------------RNRRVGVPIGRTATLECEVEAFPLS--VRYW 403 (902)
Q Consensus 363 C~A~N-~-----------------~P~i~~-------------------~p~~~~v~~G~~v~L~C~a~g~P~P--~v~W 403 (902)
|.... . .|.... ....-.+..|++++|.|.+.|+... .+.|
T Consensus 88 C~~~~~~~~tFG~GTkLeikr~~aa~~~s~~~~s~~a~ssGv~sqvqL~eSG~~lvkPG~Sl~LSC~aSG~tfs~y~~~W 167 (259)
T 4f9l_D 88 CQQGHSYPYTFGGGTKLDIKRADAGGGGSGGGGSGGGGSGGGGSQVQLQESGAELVKPGASVKLSCKASGYTFTRYYLYW 167 (259)
T ss_dssp EEECSSSSCCBCCCCEECBCCC----------------------CCCEEEECCCEEESSSCEEEEEEEESSCGGGSCEEE
T ss_pred EeecCCCCCCccCCeEEEEeccccCccccccccccccccCCccccceEEeECCCEECCCCcEEEEEeeeCCCcccCcEEE
Confidence 97654 0 111110 0111236679999999999988643 5778
Q ss_pred EecC--Cee-----ee-cC---------CceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEE
Q psy12803 404 EFID--GTL-----IE-HD---------GVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISK 452 (902)
Q Consensus 404 ~k~~--~~l-----~~-~~---------~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~ 452 (902)
.+.. ..+ +. .. ..++.+..+.... +..|.+.+++.+|.+.|.|...
T Consensus 168 vRQaPGkgLEwvg~I~~~~g~t~Ya~svkGRfTISrD~s~n---t~yLqm~sL~~eDTAvYYCAr~ 230 (259)
T 4f9l_D 168 VKQRPGQGLEWIGEINPNNGGTKFNEKFKSKATLTVDKSSR---TTYIQLSSLTSEDSAVYYCSRE 230 (259)
T ss_dssp EEECTTSCEEEEEEECTTTCCEEECTTSTTTEEEEEETTTT---EEEEEECSCCGGGCEEEEEEEE
T ss_pred EEECCCCceEEEeEEeCCCCceEecHhhcCCEEEEEEcccc---EEEEEECCCChHHCEEEEEEEe
Confidence 7532 211 11 01 1234444333322 3459999999999999999543
No 443
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.48 E-value=7.1e-08 Score=98.83 Aligned_cols=92 Identities=16% Similarity=0.234 Sum_probs=67.9
Q ss_pred cCceeeeecCceEEEEEEeeccCC-ceEEEEecCCeee----ec---CCc--eEEEe----------ecCCCceeeEeEE
Q psy12803 375 RNRRVGVPIGRTATLECEVEAFPL-SVRYWEFIDGTLI----EH---DGV--KYSIS----------DVDKGSYQYIMQL 434 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~P~-P~v~W~k~~~~l~----~~---~~~--~~~~~----------~~~~~s~~~~stL 434 (902)
.+..+.+.+|+++.|.|.+.+.|. +.+.|++++.... .. ... .-++. ...++ .|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~------~L 79 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG------RL 79 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC------CE
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCc------eE
Confidence 466788999999999999999995 8999998654311 10 000 11111 12222 29
Q ss_pred EEeccCCCCCeEEEEEEEeCC-ceeEEEEEEEeecCCCC
Q psy12803 435 NISNVNISDFDTYRCISKNEV-DIAKGSLILFESNAKTP 472 (902)
Q Consensus 435 ~I~~V~~~DsG~YtC~A~N~~-G~~~~s~~L~V~~~p~~ 472 (902)
.|.+++.+|+|.|+|.|.|.. +..+..+.|.|...+..
T Consensus 80 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~ 118 (231)
T 2pet_A 80 VLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEA 118 (231)
T ss_dssp EESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCC
T ss_pred EEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCC
Confidence 999999999999999999997 88889999999876543
No 444
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.48 E-value=3.7e-07 Score=92.60 Aligned_cols=92 Identities=17% Similarity=0.183 Sum_probs=64.8
Q ss_pred EEEEcCceeeeecCceEEEEEEeeccCCceEEEEecC--Cee--eec--------CCceEEEeecCCCceeeEeEEEEec
Q psy12803 371 QILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFID--GTL--IEH--------DGVKYSISDVDKGSYQYIMQLNISN 438 (902)
Q Consensus 371 ~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~--~~l--~~~--------~~~~~~~~~~~~~s~~~~stL~I~~ 438 (902)
.+...+ .+.+.+|++++|.|.+.+.|.+.+.|++.. ..+ +.. ...++.+.... ...+|.|.+
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~ 76 (213)
T 3mj8_L 3 TLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSG-----NMATLTISK 76 (213)
T ss_dssp CBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEET-----TEEEEEESS
T ss_pred eEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecC-----CEEEEEECC
Confidence 344455 788999999999999999999999999832 111 100 11122222111 134699999
Q ss_pred cCCCCCeEEEEEEEeCCc---eeEEEEEEEeec
Q psy12803 439 VNISDFDTYRCISKNEVD---IAKGSLILFESN 468 (902)
Q Consensus 439 V~~~DsG~YtC~A~N~~G---~~~~s~~L~V~~ 468 (902)
++.+|+|.|+|.|.|..+ .....+.|.|..
T Consensus 77 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 109 (213)
T 3mj8_L 77 AQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLG 109 (213)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEBCCEEEEEEC
T ss_pred CChhhCEEEEEEeccCCcceeEEcCceEEEEeC
Confidence 999999999999999988 445666777764
No 445
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.48 E-value=4.1e-07 Score=95.59 Aligned_cols=98 Identities=10% Similarity=0.152 Sum_probs=65.8
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeecc--CCceEEEEecC--Ce---eeecC------------CceEEEeecCCCcee
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAF--PLSVRYWEFID--GT---LIEHD------------GVKYSISDVDKGSYQ 429 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~--P~P~v~W~k~~--~~---l~~~~------------~~~~~~~~~~~~s~~ 429 (902)
++.+...+..+.+.+|++|+|.|.+.+. |.+.+.|++.. .. +.... ..++.+......
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~--- 82 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSA--- 82 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTT---
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCC---
Confidence 4566777888999999999999999884 67899998743 11 10000 122333211111
Q ss_pred eEeEEEEeccCCCCCeEEEEEEEeC------------CceeEEEEEEEeecC
Q psy12803 430 YIMQLNISNVNISDFDTYRCISKNE------------VDIAKGSLILFESNA 469 (902)
Q Consensus 430 ~~stL~I~~V~~~DsG~YtC~A~N~------------~G~~~~s~~L~V~~~ 469 (902)
...+|.|.+++.+|+|.|.|.|.|. .+.......|.|...
T Consensus 83 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~ 134 (256)
T 3juy_B 83 NTAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSG 134 (256)
T ss_dssp TEEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSC
T ss_pred CEEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCC
Confidence 1346999999999999999999997 333445566777654
No 446
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.48 E-value=5.9e-08 Score=98.04 Aligned_cols=79 Identities=11% Similarity=0.020 Sum_probs=60.2
Q ss_pred ecCceEEEEEEeecc-CCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCceeEE
Q psy12803 382 PIGRTATLECEVEAF-PLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVDIAKG 460 (902)
Q Consensus 382 ~~G~~v~L~C~a~g~-P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G~~~~ 460 (902)
-.++.+.|.|.+.+. |.+.+.|++++..+.... ++.+..... ..+|.|.+++.+|+|.|+|.|.|..+....
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~--~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~ 87 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSD--RVKTGVTGE-----QIWLQINEPTPNDKGKYVMELFDGKTGHQK 87 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCS--SEEEEEETT-----EEEEEEESCCGGGCEEEEEEEECSSCEEEE
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCC--eEEEEEeCC-----EEEEEECCCCcccCEEEEEEEecCCcceEE
Confidence 357788889988885 588999999887665433 333322221 245999999999999999999999999888
Q ss_pred EEEEEee
Q psy12803 461 SLILFES 467 (902)
Q Consensus 461 s~~L~V~ 467 (902)
++.|.|.
T Consensus 88 ~~~l~v~ 94 (212)
T 2r15_A 88 TVDLSGQ 94 (212)
T ss_dssp EEEECHH
T ss_pred EEEEEEe
Confidence 8888764
No 447
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.47 E-value=6e-07 Score=81.78 Aligned_cols=79 Identities=23% Similarity=0.249 Sum_probs=57.2
Q ss_pred EEEcCceeeeecCceEEEEEEeeccCCceEEEEecCC----e-eeec-------CCceEEEeecCCCceeeEeEEEEecc
Q psy12803 372 ILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDG----T-LIEH-------DGVKYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 372 i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~----~-l~~~-------~~~~~~~~~~~~~s~~~~stL~I~~V 439 (902)
+...+..+.+.+|++|+|.|.+.+.|.+.+.|++... . +... ...++.+.... ...+|.|.++
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v 78 (108)
T 1jhl_L 4 LTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSG-----TDFTLTISSL 78 (108)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESS-----SEEEEEECSC
T ss_pred eeccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecC-----CEEEEEECCC
Confidence 4556777889999999999999999989999998642 1 1111 01223322111 1346999999
Q ss_pred CCCCCeEEEEEEEeCC
Q psy12803 440 NISDFDTYRCISKNEV 455 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~ 455 (902)
+.+|+|.|.|.|.|..
T Consensus 79 ~~~DsG~Y~C~~~n~~ 94 (108)
T 1jhl_L 79 EPEDFAMYICQQHNEY 94 (108)
T ss_dssp CTTCCSEEEEEECSSS
T ss_pred CHHHCEEEEEEEccCC
Confidence 9999999999999864
No 448
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.47 E-value=4.5e-07 Score=85.51 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=61.7
Q ss_pred EcCceeeeecCceEEEEEEeeccCC---ceEEEEecCCeee---ecC------------CceEEEeecCCCceeeEeEEE
Q psy12803 374 IRNRRVGVPIGRTATLECEVEAFPL---SVRYWEFIDGTLI---EHD------------GVKYSISDVDKGSYQYIMQLN 435 (902)
Q Consensus 374 ~~p~~~~v~~G~~v~L~C~a~g~P~---P~v~W~k~~~~l~---~~~------------~~~~~~~~~~~~s~~~~stL~ 435 (902)
..+..+...+|++|+|.|.+...+. ..|.|++.+.... ... ..+....... ...-..+|.
T Consensus 10 ~~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~--~~~g~~sL~ 87 (125)
T 4gos_A 10 VTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ--VIVGNASLR 87 (125)
T ss_dssp EEEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTT--GGGTBCCEE
T ss_pred ccCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCC--ccCCeEEEE
Confidence 3444567889999999999865433 3689998653210 000 1112211110 001123599
Q ss_pred EeccCCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 436 ISNVNISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 436 I~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
|.+|+.+|+|.|+|.+.|..|..++.+.|.|=
T Consensus 88 I~~v~~~D~G~Y~C~v~~~~g~~~~~v~LkVG 119 (125)
T 4gos_A 88 LKNVQLTDAGTYKCYIITSKGKGNANLEYKTG 119 (125)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ECCCChHHCEEEEEEEEeCCCeEEEEEEEEEC
Confidence 99999999999999999999999999999873
No 449
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.47 E-value=6.9e-07 Score=80.97 Aligned_cols=89 Identities=17% Similarity=0.235 Sum_probs=61.3
Q ss_pred ceeeeecCceEEEEEEeec-cCCceEEEEecCCeeeec--CCc--eEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEE
Q psy12803 377 RRVGVPIGRTATLECEVEA-FPLSVRYWEFIDGTLIEH--DGV--KYSISDVDKGSYQYIMQLNISNVNISDFDTYRCIS 451 (902)
Q Consensus 377 ~~~~v~~G~~v~L~C~a~g-~P~P~v~W~k~~~~l~~~--~~~--~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A 451 (902)
....+.+|+.+.|.|.+.+ .|.|.|+|.|.++..-.. ... +....+..+. ....|.|.+|..+|+|.|+|.|
T Consensus 22 S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~---s~fiL~f~~V~~sDsG~YrCsA 98 (122)
T 1xau_A 22 SKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSV---PVFVLHFKPIHLSDNGSYSCST 98 (122)
T ss_dssp EEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSS---CEEEEEETTCCGGGCEEEEEEE
T ss_pred ccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCc---eeEEEEEeeEEEcCCccEEEEe
Confidence 3467889999999999976 589999999987532111 111 1122222221 2456999999999999999999
Q ss_pred EeCCceeE-EEEEEEeec
Q psy12803 452 KNEVDIAK-GSLILFESN 468 (902)
Q Consensus 452 ~N~~G~~~-~s~~L~V~~ 468 (902)
.|..|..+ .+..|.|.+
T Consensus 99 n~~~g~ieSHs~ti~V~~ 116 (122)
T 1xau_A 99 NFNSQVINSHSVTIHVRE 116 (122)
T ss_dssp EETTEEEECCCEEEEEC-
T ss_pred eCCCCceeeeEEEEEEEe
Confidence 99998775 344455543
No 450
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.46 E-value=6.6e-07 Score=82.78 Aligned_cols=87 Identities=16% Similarity=-0.017 Sum_probs=60.4
Q ss_pred EcCceeeeecCceEEEEEEeeccCCceEEEEecCCee-----ee------------cCCceEEEeecCCCceeeEeEEEE
Q psy12803 374 IRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTL-----IE------------HDGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 374 ~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l-----~~------------~~~~~~~~~~~~~~s~~~~stL~I 436 (902)
+.+....+.+|++|.|.|.....+.+.+.|++..... .. ..+.+..+ ..+++ |.|
T Consensus 5 i~~~p~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~--~~ngS------L~I 76 (111)
T 2qsq_A 5 IESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREII--YPNAS------LLI 76 (111)
T ss_dssp EEEESSEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEE--CTTSC------EEE
T ss_pred EEeccceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEE--ecCCc------EEE
Confidence 3344457899999999998643444579998865321 10 01222222 23344 999
Q ss_pred eccCCCCCeEEEEEEEeCCc-eeEEEEEEEeec
Q psy12803 437 SNVNISDFDTYRCISKNEVD-IAKGSLILFESN 468 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G-~~~~s~~L~V~~ 468 (902)
.+|+.+|+|.|+|.+.|..+ ..+.++.|.|..
T Consensus 77 ~nvt~~D~G~Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 77 QNIIQNDAGFYTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp CSCCGGGCEEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred ccCcccCCeEEEEEEEeCCCcEEEEEEEEEEec
Confidence 99999999999999999976 467888888864
No 451
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.46 E-value=4.6e-07 Score=96.00 Aligned_cols=111 Identities=17% Similarity=0.203 Sum_probs=61.7
Q ss_pred eeeecCceeEEeecC--------CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCC--ee--e-ec-CCc--
Q psy12803 353 INRINMGAYMCLADN--------VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDG--TL--I-EH-DGV-- 416 (902)
Q Consensus 353 Vt~~DsG~YtC~A~N--------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~--~l--~-~~-~~~-- 416 (902)
.+++|.+.|.|.|.| ....+...+..+.+.+|++|+|.|.+.+ +.+.|.|++... .+ + .. ...
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~ 81 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVL 81 (270)
T ss_dssp -------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEE
T ss_pred chhhhHHHHHHHHhccCCccccccceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCce
Confidence 467899999999998 3456666777889999999999999866 778999988321 11 0 00 000
Q ss_pred --------eEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCC----ceeEEEEEEEeec
Q psy12803 417 --------KYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEV----DIAKGSLILFESN 468 (902)
Q Consensus 417 --------~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~----G~~~~s~~L~V~~ 468 (902)
++.+..... ...+|.|.+++.+|+|.|+|.+.|.. ........|.|..
T Consensus 82 ~~~~~~~~r~~~~~~~~----~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 141 (270)
T 3qib_D 82 QQIDMTEKRFSAECPSN----SPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLE 141 (270)
T ss_dssp EECHHHHHHEEEECCTT----SCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEES
T ss_pred ecCCccCCcEEEEeCCC----cEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEcc
Confidence 233222111 13469999999999999999999743 2223444566654
No 452
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.46 E-value=5.1e-07 Score=91.55 Aligned_cols=94 Identities=21% Similarity=0.226 Sum_probs=65.7
Q ss_pred CEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecC--Ce--eeecC--------CceEEEeecCCCceeeEeEEEEe
Q psy12803 370 PQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFID--GT--LIEHD--------GVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 370 P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~--~~--l~~~~--------~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
+.+...+..+.+.+|++++|.|.+.+.|.+.|.|++.. .. .+... ..++.+.... ...+|.|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~ 76 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSG-----TDFTLTIS 76 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEEC
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCC-----CEEEEEEC
Confidence 45666677889999999999999999999999998853 11 11111 1223222111 13469999
Q ss_pred ccCCCCCeEEEEEEEeCCc---eeEEEEEEEeec
Q psy12803 438 NVNISDFDTYRCISKNEVD---IAKGSLILFESN 468 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G---~~~~s~~L~V~~ 468 (902)
+++.+|+|.|+|.|.|..+ .......|.|..
T Consensus 77 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 110 (213)
T 3nl4_L 77 DLECADAATYYCQSTYENPTYVSFGGGTEVGVKG 110 (213)
T ss_dssp SCCGGGCEEEEEEECCSSTTTCEECCCEEEEEEC
T ss_pred CCChHHCEEEEEecCCCCceeEEeCCCeEEEEeC
Confidence 9999999999999999877 334445566643
No 453
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.45 E-value=1.1e-07 Score=96.24 Aligned_cols=94 Identities=14% Similarity=0.010 Sum_probs=65.0
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
.+|.|...+. ..+.+|++++|.|.+. .|.+.+.|+|++..+....... ... . ......|.|.+++.+|+|.|
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~-~~~-~----~~~~~~l~I~~v~~~D~G~Y 78 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIG-EHH-D----GVSKANFSISRMTQDLAGTY 78 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEEC-EEE-T----TEEEEEEEESSCCGGGCEEE
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeee-ecC-C----CCceEEEEeccCCcccCeEE
Confidence 3577777665 6688999999999997 4778999999887653211000 000 0 01234699999999999999
Q ss_pred EEEEEeCC-----ceeEEEEEEEeecC
Q psy12803 448 RCISKNEV-----DIAKGSLILFESNA 469 (902)
Q Consensus 448 tC~A~N~~-----G~~~~s~~L~V~~~ 469 (902)
+|.|.|.. ...+..+.|.|...
T Consensus 79 ~C~a~~~~~~~~~~~~s~~~~l~V~~~ 105 (201)
T 1nkr_A 79 RCYGSVTHSPYQVSAPSDPLDIVIIGL 105 (201)
T ss_dssp EEEEEBTTBTTCCCCCCCCEEEEEECS
T ss_pred EEeEecCCCCccccCCCCCEEEEeecc
Confidence 99998753 22345667777654
No 454
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.45 E-value=7.5e-07 Score=91.97 Aligned_cols=81 Identities=19% Similarity=0.259 Sum_probs=64.8
Q ss_pred eeeecCceEEEEEEeeccCCc--eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCc
Q psy12803 379 VGVPIGRTATLECEVEAFPLS--VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 379 ~~v~~G~~v~L~C~a~g~P~P--~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G 456 (902)
+.+.+|++++|+|.+ +.|.| .|.|++.+..+ .. .... .. ...|.|.+|+.+|+|.|.|.|.|..+
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~--~~~~-~~------~~~L~I~~v~~~d~G~Y~C~a~n~~~ 83 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GA--VQSD-TG------RSVLTVRNASLSAAGTRVCVGSCGGR 83 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CC--EEEE-SS------EEEEEECSCCGGGCEEEEEEEEETTE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---Cc--EEec-CC------ccEEEECccCcccCceEEEEEEeCCC
Confidence 689999999999999 99888 99998865433 11 1111 11 24599999999999999999999999
Q ss_pred eeEEEEEEEeecCCCC
Q psy12803 457 IAKGSLILFESNAKTP 472 (902)
Q Consensus 457 ~~~~s~~L~V~~~p~~ 472 (902)
.....+.|.|..+|..
T Consensus 84 ~~~~~~~ltV~~~P~~ 99 (210)
T 1gsm_A 84 TFQHTVQLLVYAFPNQ 99 (210)
T ss_dssp EEEEEEEEEEEBCCSE
T ss_pred ceEEEEEEEEEecCCC
Confidence 9889999999876643
No 455
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.45 E-value=2.5e-07 Score=84.37 Aligned_cols=72 Identities=19% Similarity=0.345 Sum_probs=53.0
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCC--cc--cc-c-------CCccceec---cCCcEEEEeeeeecCcee
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN--KP--IT-L-------GSWKDSAV---ASSTLNFTRINRINMGAY 361 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~--~~--~~-~-------~~~~~~~~---~~~sL~I~~Vt~~DsG~Y 361 (902)
.+..+.+.+|++|+|.|.+.+.|.+.+.|+|... .+ +. . ...+.... ...+|+|.+++.+|+|.|
T Consensus 7 ~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 86 (108)
T 1jhl_L 7 SPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAMY 86 (108)
T ss_dssp ECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCCSEE
T ss_pred cCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHCEEE
Confidence 4566889999999999999998889999998642 11 11 0 01122211 124799999999999999
Q ss_pred EEeecCC
Q psy12803 362 MCLADNV 368 (902)
Q Consensus 362 tC~A~N~ 368 (902)
.|.|.|.
T Consensus 87 ~C~~~n~ 93 (108)
T 1jhl_L 87 ICQQHNE 93 (108)
T ss_dssp EEEECSS
T ss_pred EEEEccC
Confidence 9999884
No 456
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.45 E-value=3.3e-07 Score=95.48 Aligned_cols=91 Identities=15% Similarity=0.238 Sum_probs=60.6
Q ss_pred CceeeeecCceEEEEEEeeccC--CceEEEEecCC--ee--ee-------------cCCceEEEeecCCCceeeEeEEEE
Q psy12803 376 NRRVGVPIGRTATLECEVEAFP--LSVRYWEFIDG--TL--IE-------------HDGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 376 p~~~~v~~G~~v~L~C~a~g~P--~P~v~W~k~~~--~l--~~-------------~~~~~~~~~~~~~~s~~~~stL~I 436 (902)
+..+.+.+|++++|.|.+.+.| .+.|.|++... .+ +. ....++.+...... ...+|.|
T Consensus 9 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I 85 (247)
T 2ghw_B 9 SGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSK---NTLYLQM 85 (247)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTT---TEEEEEE
T ss_pred cCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCC---CEEEEEE
Confidence 3457899999999999999987 67899988531 11 10 01123333221111 1346999
Q ss_pred eccCCCCCeEEEEEEEeCCcee--EEEEEEEeecC
Q psy12803 437 SNVNISDFDTYRCISKNEVDIA--KGSLILFESNA 469 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G~~--~~s~~L~V~~~ 469 (902)
.+++.+|+|.|+|.|.|..+.. ...+.|.|...
T Consensus 86 ~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~ 120 (247)
T 2ghw_B 86 NSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSG 120 (247)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSC
T ss_pred CcCCHHHCEEEEEeeeccCCccccCCceEEEEecc
Confidence 9999999999999999984332 23456777654
No 457
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.44 E-value=1.6e-07 Score=92.94 Aligned_cols=83 Identities=27% Similarity=0.407 Sum_probs=59.5
Q ss_pred CcccccCCcccCCceeecCCcEEEEcCCeEEEEEecCCCC-CCceEEec---CCCcccccCC-ccceecc---CCcEEEE
Q psy12803 280 TSQLLIPPTIVGSEHIFSSSPIVVREGDNVRLRCVATGHP-KPSIIWKT---SENKPITLGS-WKDSAVA---SSTLNFT 351 (902)
Q Consensus 280 ~~~v~vpP~i~~~~~i~~~~~v~v~eGe~v~L~C~a~G~P-~p~v~W~k---~~~~~~~~~~-~~~~~~~---~~sL~I~ 351 (902)
.+.+.++|.+. ..+....+.+|++++|.|.+.+.| .+.+.|+| ++..++.... .+..... ...|.|.
T Consensus 77 ~l~V~~~P~~~-----~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 151 (184)
T 3b5h_A 77 NIQLHGPPRVK-----AVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIE 151 (184)
T ss_dssp EEEECCSCCCE-----ESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEEC
T ss_pred EEEEecCCcee-----ecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEe
Confidence 34445555443 233556789999999999999999 89999999 5554443221 2222222 2389999
Q ss_pred eee-eecCceeEEeecC
Q psy12803 352 RIN-RINMGAYMCLADN 367 (902)
Q Consensus 352 ~Vt-~~DsG~YtC~A~N 367 (902)
+++ .+|+|.|+|.|.|
T Consensus 152 ~v~~~~d~G~Y~C~a~N 168 (184)
T 3b5h_A 152 NLNMEADPGQYRCNGTS 168 (184)
T ss_dssp SCCTTTSSEEEEEEEEE
T ss_pred eccccccCceEEEEEEe
Confidence 999 8999999999998
No 458
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.44 E-value=5.1e-07 Score=94.84 Aligned_cols=96 Identities=17% Similarity=0.100 Sum_probs=60.6
Q ss_pred EEEEcCceeeeecCceEEEEEEeecc--CCceEEEEecCC--e--ee---e---------cCCceEEEeecCCCceeeEe
Q psy12803 371 QILIRNRRVGVPIGRTATLECEVEAF--PLSVRYWEFIDG--T--LI---E---------HDGVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 371 ~i~~~p~~~~v~~G~~v~L~C~a~g~--P~P~v~W~k~~~--~--l~---~---------~~~~~~~~~~~~~~s~~~~s 432 (902)
.....+..+.+.+|++|+|.|.+.+. +.+.+.|++... . ++ . ....++.+..... ....
T Consensus 10 v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~ 86 (257)
T 3gkz_A 10 VQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTS---KNQV 86 (257)
T ss_dssp EEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGG---GTEE
T ss_pred EEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecC---CceE
Confidence 33445566779999999999999984 478999998431 1 11 0 0111222221111 1134
Q ss_pred EEEEeccCCCCCeEEEEEEEeCC----ceeEEEEEEEeecC
Q psy12803 433 QLNISNVNISDFDTYRCISKNEV----DIAKGSLILFESNA 469 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~----G~~~~s~~L~V~~~ 469 (902)
+|.|.+++.+|+|.|+|.|.|.. ......+.|.|...
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~ 127 (257)
T 3gkz_A 87 YLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGG 127 (257)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC--
T ss_pred EEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCc
Confidence 69999999999999999999972 22334456777654
No 459
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.43 E-value=2.2e-07 Score=97.85 Aligned_cols=97 Identities=14% Similarity=0.197 Sum_probs=54.5
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecC--Ce--eee-cC--C-----------ceEEEeecCCCceee
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFID--GT--LIE-HD--G-----------VKYSISDVDKGSYQY 430 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~--~~--l~~-~~--~-----------~~~~~~~~~~~s~~~ 430 (902)
+|.+...+..+.+.+|++|+|.|.+.+.|.+.+.|++.. .. ++. .. . .++...... ..
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~~ 77 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGST----RK 77 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC------C
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCC----CC
Confidence 456667778889999999999999999999999998832 11 110 00 0 011110000 11
Q ss_pred EeEEEEeccCCCCCeEEEEEEEeCCc---eeEEEEEEEeecC
Q psy12803 431 IMQLNISNVNISDFDTYRCISKNEVD---IAKGSLILFESNA 469 (902)
Q Consensus 431 ~stL~I~~V~~~DsG~YtC~A~N~~G---~~~~s~~L~V~~~ 469 (902)
..+|.|.+++.+|+|.|.|.|.|..+ .......|.|...
T Consensus 78 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~ 119 (259)
T 3omz_A 78 NLRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDK 119 (259)
T ss_dssp CCEEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC-
T ss_pred eEEEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecC
Confidence 34599999999999999999999876 3344556666654
No 460
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.43 E-value=1.6e-07 Score=95.68 Aligned_cols=94 Identities=18% Similarity=0.246 Sum_probs=64.5
Q ss_pred cCceeeeecCceEEEEEEeeccCC-----ceEEEEecCCeeeecCC-------------ceEEEeecCCCceeeEeEEEE
Q psy12803 375 RNRRVGVPIGRTATLECEVEAFPL-----SVRYWEFIDGTLIEHDG-------------VKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~P~-----P~v~W~k~~~~l~~~~~-------------~~~~~~~~~~~s~~~~stL~I 436 (902)
.+..+.+.+|+++.|.|.+.+.|. +.+.|++++..+..... .+..+.... ......+|.|
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~--~~~~~~~L~I 84 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQ--LSLGNAALQI 84 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHH--HTTTEEEEEE
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEcccc--ccCCEEEEEE
Confidence 455678899999999999988774 38999987633221111 111111100 0001246999
Q ss_pred eccCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 437 SNVNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
.+++.+|+|.|+|.|.| .+.....+.|.|..++.
T Consensus 85 ~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~ 118 (222)
T 3sbw_C 85 TDVKLQDAGVYRCMISY-GGADYKRITVKVNAPYN 118 (222)
T ss_dssp SSCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCC
T ss_pred cCcccccCeEEEEEEEe-CCCceeEEEEEEECCCC
Confidence 99999999999999999 67778888898886544
No 461
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=98.42 E-value=3.2e-07 Score=94.67 Aligned_cols=143 Identities=18% Similarity=0.269 Sum_probs=88.2
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCC--c--cccc--C------Cccceec-----cCCcEEEEeeeeecCc
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN--K--PITL--G------SWKDSAV-----ASSTLNFTRINRINMG 359 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~--~--~~~~--~------~~~~~~~-----~~~sL~I~~Vt~~DsG 359 (902)
.+..+.+.+|++|+|.|.+.+.....+.|+|... . .+.. . ..+.... ...+|+|.+++.+|+|
T Consensus 9 ~p~~~~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg 88 (210)
T 2eys_A 9 SPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSA 88 (210)
T ss_dssp ECSEEEEETTCCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCE
T ss_pred eCCEEEEecCCCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCcccCc
Confidence 3566889999999999999876667899998542 1 1111 1 1112211 1237999999999999
Q ss_pred eeEEeecCC----C-------CEEEEcC----c--eeeee--cCceEEEEEEeeccCCc-eEEEEecCCeeeecCCceEE
Q psy12803 360 AYMCLADNV----P-------PQILIRN----R--RVGVP--IGRTATLECEVEAFPLS-VRYWEFIDGTLIEHDGVKYS 419 (902)
Q Consensus 360 ~YtC~A~N~----~-------P~i~~~p----~--~~~v~--~G~~v~L~C~a~g~P~P-~v~W~k~~~~l~~~~~~~~~ 419 (902)
.|.|.+.+. . -.+.+.. . .+.+. ..+.++|.|.+.++.++ .+.+.. ....+
T Consensus 89 ~Y~C~~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~~~~~~~tl~Cl~~gf~P~~~v~~~~--------~~~~~- 159 (210)
T 2eys_A 89 SYICVVSDRGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSK--------DSDVY- 159 (210)
T ss_dssp EEEEEEESCSSTTCCEEECCCEEEEEECCCSSCCCEEEEECCCSSSSCEEEEEESCCTTCCCCCCS--------STTEE-
T ss_pred eEEEEEEccCCCcccceECCCEEEEEECCCCCCCCeEEecCCCCCCceEEEEcccccCCcEecccc--------CcceE-
Confidence 999998651 0 1111110 1 11111 12367899999988544 332211 11111
Q ss_pred EeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeCCc
Q psy12803 420 ISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNEVD 456 (902)
Q Consensus 420 ~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~~G 456 (902)
. .. ...|.+..+...|.|.|+|.+.|.++
T Consensus 160 ~--t~------~~~l~~~~~~~~~~~~~~w~~~~~~~ 188 (210)
T 2eys_A 160 I--TD------KCVLDMRSMDFKSNSAVAWSNKSDFA 188 (210)
T ss_dssp E--CC------CEEEEETTTTEEEEEEEEEECSTTCC
T ss_pred c--cC------chhcchhcccccccchhhccCCCceE
Confidence 0 01 12488888999999999999988765
No 462
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=98.42 E-value=1.5e-06 Score=90.35 Aligned_cols=154 Identities=20% Similarity=0.313 Sum_probs=96.3
Q ss_pred ecCCcEEEEcCCeEEEEEecCCCC--CCceEEecC--CCccc-----c-cC---------Cccceecc-C----CcEEEE
Q psy12803 296 FSSSPIVVREGDNVRLRCVATGHP--KPSIIWKTS--ENKPI-----T-LG---------SWKDSAVA-S----STLNFT 351 (902)
Q Consensus 296 ~~~~~v~v~eGe~v~L~C~a~G~P--~p~v~W~k~--~~~~~-----~-~~---------~~~~~~~~-~----~sL~I~ 351 (902)
.++..-.++.|++|.|.|.+.|.. .-.+.|.|. ++.+. . .. ..+..+.. + -.|.+.
T Consensus 5 ~eSG~~lvkPG~Sl~lSC~~SG~tf~~y~~~WvRQaPGkgLEWvg~I~~~~g~t~Y~~s~kgR~TiSrD~s~nt~yLqm~ 84 (254)
T 4f9p_D 5 QQSGAEVVRPGTSVKVSCKASGYAFTSYLIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTADQSSSTAYMQLS 84 (254)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGCCEEEEEEETTTEEEEEEEEETTTTEEECCTTTTTTEEEEEETTTTEEEEEEC
T ss_pred EeECCceECCCCCeEEEEEEeCCChhhCcEEEEEeCCCCCeEEEEEEcCCCCCEEECHHhCCCEEEeeccCCCcCeeEEc
Confidence 344556689999999999999854 234778763 11110 0 00 01111111 1 258899
Q ss_pred eeeeecCceeEEeecC-----------------------------------CCCEEEEcCceeeeecCceEEEEEEeecc
Q psy12803 352 RINRINMGAYMCLADN-----------------------------------VPPQILIRNRRVGVPIGRTATLECEVEAF 396 (902)
Q Consensus 352 ~Vt~~DsG~YtC~A~N-----------------------------------~~P~i~~~p~~~~v~~G~~v~L~C~a~g~ 396 (902)
+++.+|+..|.|.... ....++..|..+.+.+|++++|.|.+...
T Consensus 85 sL~~eDTAvYYCAr~~~~d~WGqGT~VTVSSast~~ps~~~l~~~~sgGSgsdivltQsP~slsvs~G~~vtlsC~~S~~ 164 (254)
T 4f9p_D 85 SLTSDDSAVYFCARSDYGAYWGQGTLVTVSAAGGGGSGGGGSGGGGSGGGGSDIVLTQSPVTLSVTPGDSVSLSCRASQS 164 (254)
T ss_dssp SCCGGGCEEEECEESSSCCEECCCEEEEECC-------------------CCSCCEEEECSEEEECTTCEEEEEEEESSC
T ss_pred cCCCCCCEEEEEEecCCCCCcCCCEEEEEeCCCCcCCCCCCCccccccccccccccccCCceeEEcCCCcEeeEEEccCc
Confidence 9999999999996543 11134445666788999999999998765
Q ss_pred CCceEEEEec--CCe--eeecCC--------ceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEEeC
Q psy12803 397 PLSVRYWEFI--DGT--LIEHDG--------VKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISKNE 454 (902)
Q Consensus 397 P~P~v~W~k~--~~~--l~~~~~--------~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~N~ 454 (902)
-...+.|++. +.. ++.... .++.... ++ ...+|+|.+++.+|.+.|.|...+.
T Consensus 165 ~~~~l~WyqQ~PG~~p~lLiy~~s~~~sGvp~RFSgS~--sg---t~ftLtIs~lq~eD~A~YYC~q~~~ 229 (254)
T 4f9p_D 165 ISNNLHWYRQKSHESPRLLIKYASQSIFGIPSRFSGSG--SG---TEFTLSINSVETEDFGIYFCQQSNS 229 (254)
T ss_dssp CTTCCEEEEECTTSCCEEEEETTTEECTTSCTTCEEEC--CT---TEEEEEEESCCTTCCEEEEEEECSS
T ss_pred ccCCcEEEEECCCCCCEEEEEeeeecCCCCCCCEEeee--eC---CEEEEEECCCCHHHCEEEEEeecCC
Confidence 5556899854 221 111110 1222211 11 1346999999999999999976554
No 463
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.41 E-value=8.7e-07 Score=90.00 Aligned_cols=94 Identities=17% Similarity=0.199 Sum_probs=64.3
Q ss_pred CEEEEcCceeeeecCceEEEEEEeecc-CCceEEEEecC---Ce--eeecCC-----------ceEEEeecCCCceeeEe
Q psy12803 370 PQILIRNRRVGVPIGRTATLECEVEAF-PLSVRYWEFID---GT--LIEHDG-----------VKYSISDVDKGSYQYIM 432 (902)
Q Consensus 370 P~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P~v~W~k~~---~~--l~~~~~-----------~~~~~~~~~~~s~~~~s 432 (902)
+.+...+ .+.+.+|++++|.|.+.+. |.+.|.|++.. .. +..... .++.+... ....
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-----~~~~ 75 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSS-----GADR 75 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEE-----TTEE
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecC-----CceE
Confidence 3455556 7889999999999999999 99999999843 11 100000 12222111 1134
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCc-----eeEEEEEEEeecC
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVD-----IAKGSLILFESNA 469 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G-----~~~~s~~L~V~~~ 469 (902)
+|.|.+++.+|+|.|+|.|.|..| .....+.|.|...
T Consensus 76 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 117 (218)
T 3s96_B 76 YLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQ 117 (218)
T ss_dssp EEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESC
T ss_pred EEEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecC
Confidence 699999999999999999999876 3334566777643
No 464
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.41 E-value=7.3e-07 Score=90.35 Aligned_cols=92 Identities=18% Similarity=0.193 Sum_probs=63.9
Q ss_pred EEEcCceeeeecCceEEEEEEeeccCCceEEEEecCC--ee--ee--------cCCceEEEeecCCCceeeEeEEEEecc
Q psy12803 372 ILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDG--TL--IE--------HDGVKYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 372 i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~--~l--~~--------~~~~~~~~~~~~~~s~~~~stL~I~~V 439 (902)
+...+..+.+.+|+++.|.|.+.+.|.+.|.|++++. .+ +. ....++.+.... ...+|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v 78 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG-----TDFTLSINSV 78 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-----TEEEEEESSC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCC-----CEEEEEECCC
Confidence 4555778889999999999999999999999987542 11 00 001222222111 1246999999
Q ss_pred CCCCCeEEEEEEEeCCceeE-EEEEEEeec
Q psy12803 440 NISDFDTYRCISKNEVDIAK-GSLILFESN 468 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~G~~~-~s~~L~V~~ 468 (902)
+.+|+|.|+|.|.|..+... ....|.|..
T Consensus 79 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 108 (213)
T 3d9a_L 79 ETEDFGMYFCQQSNSWPYTFGGGTKLEIKR 108 (213)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred ChhhCEEEEEeeecCCcceeCCCEEEEEec
Confidence 99999999999999887543 234566654
No 465
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.41 E-value=1.1e-06 Score=83.29 Aligned_cols=97 Identities=14% Similarity=0.197 Sum_probs=65.6
Q ss_pred EEcCceeeeecCceEEEEEEeeccC-CceEEEEecC--C--e-eeecC--------CceEEEeecCCCceeeEeEEEEec
Q psy12803 373 LIRNRRVGVPIGRTATLECEVEAFP-LSVRYWEFID--G--T-LIEHD--------GVKYSISDVDKGSYQYIMQLNISN 438 (902)
Q Consensus 373 ~~~p~~~~v~~G~~v~L~C~a~g~P-~P~v~W~k~~--~--~-l~~~~--------~~~~~~~~~~~~s~~~~stL~I~~ 438 (902)
+..+..+.+.+|++|+|.|.+.+.. ...+.|++.. . . +.... ..++.+...... ...+|+|.+
T Consensus 5 ~Q~P~~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~---~~~sL~I~~ 81 (129)
T 3rrq_A 5 TFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNG---RDFHMSVVR 81 (129)
T ss_dssp EEECSEEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTS---SEEEEEESS
T ss_pred EECCCEEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCC---CEEEEEECC
Confidence 4456678899999999999998765 5679998742 1 1 11111 123333321111 245799999
Q ss_pred cCCCCCeEEEEEEEeCCcee----EEEEEEEeecCCCC
Q psy12803 439 VNISDFDTYRCISKNEVDIA----KGSLILFESNAKTP 472 (902)
Q Consensus 439 V~~~DsG~YtC~A~N~~G~~----~~s~~L~V~~~p~~ 472 (902)
++.+|+|.|.|.+.|..+.. ...+.|.|.+.+..
T Consensus 82 ~~~~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~~~ 119 (129)
T 3rrq_A 82 ARRNDSGTYLCGAISLAPKLQIKESLRAELRVTERRAE 119 (129)
T ss_dssp CCGGGCEEEEEEEEECGGGCEEEECCCEEEEEECCCC-
T ss_pred CChhHCEEEEEEEEecCCCceeeEeceEEEEEecCccc
Confidence 99999999999999987755 45578888765544
No 466
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.40 E-value=1.4e-07 Score=93.98 Aligned_cols=79 Identities=23% Similarity=0.286 Sum_probs=60.4
Q ss_pred cCceeeeecCceEEEEEE-eeccCC-ceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEEEE
Q psy12803 375 RNRRVGVPIGRTATLECE-VEAFPL-SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCISK 452 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~-a~g~P~-P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~A~ 452 (902)
.+..+.+.+|+++.|.|. +.+.|. +.+.|++++..+......+.... .... +|.|.+++.+|+|.|+|.|.
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~-~~~~------~L~i~~v~~~d~G~Y~C~~~ 86 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVS-QTNG------NLYIANVEASDKGNYSCFVS 86 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEEC-TTTC------CEEESSCCGGGCEEEEEEEE
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEE-cCCC------eEEECcCCcccCeEEEEEEE
Confidence 346678999999999999 899998 99999998877653323222222 2222 39999999999999999999
Q ss_pred eCCceeEE
Q psy12803 453 NEVDIAKG 460 (902)
Q Consensus 453 N~~G~~~~ 460 (902)
|..+....
T Consensus 87 ~~~~~~~~ 94 (201)
T 3s97_C 87 SPSITKSV 94 (201)
T ss_dssp EGGGTEEE
T ss_pred ecCCCcch
Confidence 98766543
No 467
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.40 E-value=5.1e-07 Score=94.89 Aligned_cols=90 Identities=13% Similarity=0.135 Sum_probs=59.4
Q ss_pred CceeeeecCceEEEEEEeeccC--CceEEEEecC--Cee--e-e------------cCCceEEEeecCCCceeeEeEEEE
Q psy12803 376 NRRVGVPIGRTATLECEVEAFP--LSVRYWEFID--GTL--I-E------------HDGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 376 p~~~~v~~G~~v~L~C~a~g~P--~P~v~W~k~~--~~l--~-~------------~~~~~~~~~~~~~~s~~~~stL~I 436 (902)
+..+.+.+|++|+|.|.+.+.+ .+.+.|++.. ..+ + . ....++.+..... ....+|.|
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~I 85 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKS---SSTAYLEL 85 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGG---GTEEEEEE
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecC---CCEEEEEE
Confidence 4456699999999999999876 6799998743 111 1 0 0011222221111 11345999
Q ss_pred eccCCCCCeEEEEEEEeC----CceeEEEEEEEeec
Q psy12803 437 SNVNISDFDTYRCISKNE----VDIAKGSLILFESN 468 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~----~G~~~~s~~L~V~~ 468 (902)
.+++.+|+|.|+|.|.|. .+.......|.|..
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~ 121 (256)
T 3umt_A 86 RSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSS 121 (256)
T ss_dssp CSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC
T ss_pred CCCCcccCEEEEEEEccCCCccccEECCCEEEEEcC
Confidence 999999999999999998 34444556677764
No 468
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.39 E-value=1.2e-06 Score=83.23 Aligned_cols=101 Identities=21% Similarity=0.306 Sum_probs=63.6
Q ss_pred EEEEcCceeeeecCceEEEEEEeecc-CCceEEEEecCCe---eeecC-C---ceEEEeecCCCceeeEeEEEEeccCCC
Q psy12803 371 QILIRNRRVGVPIGRTATLECEVEAF-PLSVRYWEFIDGT---LIEHD-G---VKYSISDVDKGSYQYIMQLNISNVNIS 442 (902)
Q Consensus 371 ~i~~~p~~~~v~~G~~v~L~C~a~g~-P~P~v~W~k~~~~---l~~~~-~---~~~~~~~~~~~s~~~~stL~I~~V~~~ 442 (902)
.+...+..+.+.+|++|+|.|.+.+. +.+.+.|++.... ++... . .++..............+|+|.+++.+
T Consensus 10 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 89 (136)
T 2d9c_A 10 QVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPA 89 (136)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTT
T ss_pred EEEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHH
Confidence 44555667889999999999999876 5678999987632 21111 0 011110000000011345999999999
Q ss_pred CCeEEEEEEEeCCc--eeE----EEEEEEeecCCC
Q psy12803 443 DFDTYRCISKNEVD--IAK----GSLILFESNAKT 471 (902)
Q Consensus 443 DsG~YtC~A~N~~G--~~~----~s~~L~V~~~p~ 471 (902)
|+|.|.|.+.|..+ ... ....|.|...+.
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~s 124 (136)
T 2d9c_A 90 DAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS 124 (136)
T ss_dssp TCEEEEEEEEECCSSSCEEEEECCCEEEEEECCCC
T ss_pred HCEEEEEEEEeCCCCcccceeeCCCeEEEEEeCCC
Confidence 99999999998653 111 356777776543
No 469
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.39 E-value=2.2e-06 Score=92.49 Aligned_cols=158 Identities=15% Similarity=0.092 Sum_probs=97.2
Q ss_pred cCCcEEEEcCCeEEEEEecCC-------CCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecCCC
Q psy12803 297 SSSPIVVREGDNVRLRCVATG-------HPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADNVP 369 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G-------~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N~~ 369 (902)
.|++..+.+|++++|.|.+.+ .|.+.|.|+|++..+ ............++|+|.+++++| |.|+|.|.|..
T Consensus 10 ~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i-~~~~~~~~~~~~~~L~i~~~~~~~-g~Y~C~a~~~g 87 (303)
T 1i1r_A 10 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTI-PKEQYTIINRTASSVTFTDIASLN-IQLTCNILTFG 87 (303)
T ss_dssp ESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEEC-CGGGCEEEETTEEEEEECSCCCSE-EEEEEEEEETT
T ss_pred ccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEEC-ChhheeeeCCcEEEEEEcCcCCCc-eEEEEecccCC
Confidence 456678999999999999985 488999999986544 222211111112479999999885 99999997731
Q ss_pred CE-EEEcCc--eeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCc--------eeeEeEEEEec
Q psy12803 370 PQ-ILIRNR--RVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGS--------YQYIMQLNISN 438 (902)
Q Consensus 370 P~-i~~~p~--~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s--------~~~~stL~I~~ 438 (902)
-. ...... .+....+....|.|.........+.|......- ....+.+....... ......+.|.+
T Consensus 88 ~~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~---~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~ 164 (303)
T 1i1r_A 88 QLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETH---LETNFTLKSEWATHKFADCKAKRDTPTSCTVDY 164 (303)
T ss_dssp TEEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCCS---SCCEEEEEEEETTEECCCEECCSSCTTEEECSS
T ss_pred CcceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCCC---CCcCEEEEEEecCCCCccCCCcCCCceEEEECC
Confidence 11 111111 122234566789999887777889996443211 11123222110000 00113477777
Q ss_pred c-CCCCCeEEEEEEEeCCceeE
Q psy12803 439 V-NISDFDTYRCISKNEVDIAK 459 (902)
Q Consensus 439 V-~~~DsG~YtC~A~N~~G~~~ 459 (902)
+ .....-.++|.|.|.+|...
T Consensus 165 L~~p~t~Y~f~V~A~N~~G~~~ 186 (303)
T 1i1r_A 165 STVYFVNIEVWVEAENALGKVT 186 (303)
T ss_dssp CCCTTSCEEEEEEEEETTEEEE
T ss_pred cCcccccEEEEEEEEcCCCCcc
Confidence 7 66666677899999999764
No 470
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.39 E-value=9.1e-08 Score=96.10 Aligned_cols=94 Identities=16% Similarity=0.061 Sum_probs=60.1
Q ss_pred cCceeeeecCceEEEEEEeeccCCc---eEEEEecCCeeeec------CCceEEEee--------cCCCceeeEeEEEEe
Q psy12803 375 RNRRVGVPIGRTATLECEVEAFPLS---VRYWEFIDGTLIEH------DGVKYSISD--------VDKGSYQYIMQLNIS 437 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~P~P---~v~W~k~~~~l~~~------~~~~~~~~~--------~~~~s~~~~stL~I~ 437 (902)
.+..+.+.+|++++|.|.+.+.|.+ .|.|++++..+... ......... ..........+|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 4567889999999999999998865 48999887543211 111111100 000001112459999
Q ss_pred ccCCCCCeEEEEEEEeCCceeE-EEEEEEeec
Q psy12803 438 NVNISDFDTYRCISKNEVDIAK-GSLILFESN 468 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G~~~-~s~~L~V~~ 468 (902)
+++.+|+|.|+|.+.|..+... ....+.+..
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~ 116 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLV 116 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEee
Confidence 9999999999999998766554 444444443
No 471
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.39 E-value=1.2e-06 Score=80.56 Aligned_cols=82 Identities=13% Similarity=0.218 Sum_probs=56.3
Q ss_pred EEEcCceeeeecCceEEEEEEeeccCCceEEEEecCC--ee--e-e-----cCCceEEEeecCCCceeeEeEEEEeccCC
Q psy12803 372 ILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDG--TL--I-E-----HDGVKYSISDVDKGSYQYIMQLNISNVNI 441 (902)
Q Consensus 372 i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~--~l--~-~-----~~~~~~~~~~~~~~s~~~~stL~I~~V~~ 441 (902)
+...+..+.+.+|++|+|.|.+.+.+ +.+.|++... .+ + . ....++.+..... .....+|.|.+++.
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~--~~~~~~L~I~~v~~ 80 (113)
T 1h5b_A 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSE--RARYSTLHIRDAQL 80 (113)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSS--SSSEEEEEECSCCG
T ss_pred eEECCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccC--CCCEEEEEECCCCh
Confidence 44556778899999999999998765 6899998642 11 1 0 0112233222110 11245699999999
Q ss_pred CCCeEEEEEEEeCCc
Q psy12803 442 SDFDTYRCISKNEVD 456 (902)
Q Consensus 442 ~DsG~YtC~A~N~~G 456 (902)
+|+|.|.|.+.|..|
T Consensus 81 ~DsG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 81 EDSGTYFCAAEASSG 95 (113)
T ss_dssp GGCEEEEEEEECSSS
T ss_pred hhCEEEEEEEecCCC
Confidence 999999999999765
No 472
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.39 E-value=4e-07 Score=82.29 Aligned_cols=87 Identities=22% Similarity=0.216 Sum_probs=56.9
Q ss_pred eeeeecCceEEEEEEeeccCCc---eEEEEecCCe-------eeecC--------CceEEEeecCCCceeeEeEEEEecc
Q psy12803 378 RVGVPIGRTATLECEVEAFPLS---VRYWEFIDGT-------LIEHD--------GVKYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 378 ~~~v~~G~~v~L~C~a~g~P~P---~v~W~k~~~~-------l~~~~--------~~~~~~~~~~~~s~~~~stL~I~~V 439 (902)
.+.+.+|++|+|.|.+.+.+.+ .+.|++.... +.... ..++.+.... .....+|.|.++
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~---~~~~~sL~I~~v 79 (109)
T 2oyp_A 3 GYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDL---NKGDVSLIIKNV 79 (109)
T ss_dssp EEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCG---GGTBCCEEECSC
T ss_pred CEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCc---cCCcEeEEEccC
Confidence 4578899999999999876533 4999986521 11111 1122221110 001235999999
Q ss_pred CCCCCeEEEEEEEeCCceeEEEEEEEee
Q psy12803 440 NISDFDTYRCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~G~~~~s~~L~V~ 467 (902)
+.+|+|.|.|.+.|..+.....+.|.|.
T Consensus 80 ~~~D~G~Y~C~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 80 TLDDHGTYCCRIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp CGGGCEEEEEEECCSSTTCCEEEEEEEE
T ss_pred CChhCeEEEEEEEcCCcccceEEEEEEE
Confidence 9999999999999987666556666654
No 473
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.38 E-value=6.3e-07 Score=82.30 Aligned_cols=90 Identities=20% Similarity=0.174 Sum_probs=59.1
Q ss_pred CceeeeecCceEEEEEEeec-cCCceEEEEecCCe-------eeecC--------CceEEEeecCCCceeeEeEEEEecc
Q psy12803 376 NRRVGVPIGRTATLECEVEA-FPLSVRYWEFIDGT-------LIEHD--------GVKYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 376 p~~~~v~~G~~v~L~C~a~g-~P~P~v~W~k~~~~-------l~~~~--------~~~~~~~~~~~~s~~~~stL~I~~V 439 (902)
+..+.+.+|++|+|.|.+.. .....+.|++.... +.... ..++.+.... .....+|.|.++
T Consensus 4 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~sL~I~~v 80 (116)
T 2or8_A 4 YVEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHI---SEGDVSLTIENS 80 (116)
T ss_dssp CEEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCG---GGTBCCEEESSC
T ss_pred cceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCC---CCCeEEEEECCC
Confidence 45678999999999999875 34567999987521 11111 1222221100 011235999999
Q ss_pred CCCCCeEEEEEEEeCCcee--EEEEEEEeec
Q psy12803 440 NISDFDTYRCISKNEVDIA--KGSLILFESN 468 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~G~~--~~s~~L~V~~ 468 (902)
+.+|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 81 ~~~DsG~Y~C~v~~~~~~~~~~~~~~l~V~p 111 (116)
T 2or8_A 81 VESDSGLYCCRVEIPGWFNDQKVTFSLQVKP 111 (116)
T ss_dssp CGGGCEEEEEEECCSSTTCCEEEEEEEEEEC
T ss_pred CcccCEEEEEEEEcCCcccccEEEEEEEECC
Confidence 9999999999999876443 6667776654
No 474
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.38 E-value=3.9e-07 Score=94.32 Aligned_cols=95 Identities=21% Similarity=0.233 Sum_probs=66.1
Q ss_pred EEEEcCceeeeecCceEEEEEEeeccC----CceEEEEecC--Ce--eeec--------CCceEEEeecCCCceeeEeEE
Q psy12803 371 QILIRNRRVGVPIGRTATLECEVEAFP----LSVRYWEFID--GT--LIEH--------DGVKYSISDVDKGSYQYIMQL 434 (902)
Q Consensus 371 ~i~~~p~~~~v~~G~~v~L~C~a~g~P----~P~v~W~k~~--~~--l~~~--------~~~~~~~~~~~~~s~~~~stL 434 (902)
.+...+..+.+.+|++|+|.|.+.+.| .+.|.|+++. .. +... ...++.+.... ...+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L 77 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSR-----TDFTL 77 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEE
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecC-----CeEEE
Confidence 455667788899999999999999998 7899999863 11 1111 01223222111 12369
Q ss_pred EEeccCCCCCeEEEEEEEeCCce-eEEEEEEEeecCC
Q psy12803 435 NISNVNISDFDTYRCISKNEVDI-AKGSLILFESNAK 470 (902)
Q Consensus 435 ~I~~V~~~DsG~YtC~A~N~~G~-~~~s~~L~V~~~p 470 (902)
.|.+++.+|+|.|+|.|.|..+. ....+.|.|...+
T Consensus 78 ~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~ 114 (240)
T 1moe_A 78 IIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGG 114 (240)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCS
T ss_pred EEcCCChhhCEEEEEEEccCCceeecCCEEEEEecCC
Confidence 99999999999999999998664 3345667776543
No 475
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.38 E-value=2.8e-06 Score=77.83 Aligned_cols=93 Identities=17% Similarity=0.179 Sum_probs=63.4
Q ss_pred cCceeeeecCceEEEEEEeeccCC-ceEEEEecCC----e-eeecC-------CceEEEeecCCCceeeEeEEEEeccCC
Q psy12803 375 RNRRVGVPIGRTATLECEVEAFPL-SVRYWEFIDG----T-LIEHD-------GVKYSISDVDKGSYQYIMQLNISNVNI 441 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~P~-P~v~W~k~~~----~-l~~~~-------~~~~~~~~~~~~s~~~~stL~I~~V~~ 441 (902)
.+..+.+.+|++|+|.|.+..... ..+.|++... . +.... ..++.+...... ...+|+|.+++.
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~---~~~sL~I~~~~~ 83 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRD---FIFTVTMEDLRM 83 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTT---TEEEEEECSCCG
T ss_pred CCCEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcC---CEEEEEEccCCH
Confidence 456678999999999999986543 4699998653 1 11111 112222211111 134699999999
Q ss_pred CCCeEEEEEEEeCCceeEEEEEEEeecCC
Q psy12803 442 SDFDTYRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 442 ~DsG~YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
+|+|.|.|.+.+........+.|.|...|
T Consensus 84 ~DsG~Y~C~v~~~~~~~~~~v~L~V~~~p 112 (113)
T 1zox_A 84 SDAGIYWCGITKGGLDPMFKVTVNIGPVP 112 (113)
T ss_dssp GGCEEEEEEECCSSSCCEEEEEEEEECC-
T ss_pred HHCEEEEEeeEcCCCCccEEEEEEEEcCC
Confidence 99999999999986666888888887543
No 476
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.38 E-value=1.8e-06 Score=79.30 Aligned_cols=80 Identities=20% Similarity=0.288 Sum_probs=55.9
Q ss_pred EEEEcCceeeeecCceEEEEEEeecc--CCceEEEEecCC-e---eeecCCceEEEeecCCCceeeEeEEEEeccCCCCC
Q psy12803 371 QILIRNRRVGVPIGRTATLECEVEAF--PLSVRYWEFIDG-T---LIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDF 444 (902)
Q Consensus 371 ~i~~~p~~~~v~~G~~v~L~C~a~g~--P~P~v~W~k~~~-~---l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~Ds 444 (902)
.+...+..+.+.+|++|+|.|.+.+. +.+.+.|++... . .+.....++.+...... ...+|+|.+++.+|+
T Consensus 2 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~L~I~~v~~~Ds 78 (111)
T 2ywz_A 2 WVDQTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGS---KSFSLRISDLRVEDS 78 (111)
T ss_dssp EEEEECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTT---TEEEEEECSCCGGGC
T ss_pred eeEECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCC---CEEEEEECCCChhcC
Confidence 34556777889999999999999876 577999998631 1 11112223332211111 135699999999999
Q ss_pred eEEEEEEEe
Q psy12803 445 DTYRCISKN 453 (902)
Q Consensus 445 G~YtC~A~N 453 (902)
|.|.|.+.|
T Consensus 79 G~Y~C~~~~ 87 (111)
T 2ywz_A 79 GTYKCQADY 87 (111)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEc
Confidence 999999998
No 477
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.37 E-value=2.4e-06 Score=92.75 Aligned_cols=107 Identities=21% Similarity=0.324 Sum_probs=71.9
Q ss_pred CcEEEEcCCeEEEEEecCCC-----CCCceEEecCCCcccccCCccceeccC--CcEEEEeeeeecCceeEEeecCCCCE
Q psy12803 299 SPIVVREGDNVRLRCVATGH-----PKPSIIWKTSENKPITLGSWKDSAVAS--STLNFTRINRINMGAYMCLADNVPPQ 371 (902)
Q Consensus 299 ~~v~v~eGe~v~L~C~a~G~-----P~p~v~W~k~~~~~~~~~~~~~~~~~~--~sL~I~~Vt~~DsG~YtC~A~N~~P~ 371 (902)
.+..+.+|++|+|.|.+.+. |.+.|.|++++..+ ............ +.|+|.+++.+|+|.|+|.+.+..-.
T Consensus 8 ~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l-~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~ 86 (313)
T 2d9q_B 8 SAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQ-PGGRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQ 86 (313)
T ss_dssp SCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBC-TTCEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEE
T ss_pred CCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEEC-CccceEEEecCeEEEEEEEeccCCCccceEEeeecCCCce
Confidence 45678999999999999997 67899999987654 222111112222 57999999999999999999763222
Q ss_pred EEEcCc-eeeeecCceEEEEEEeecc-CCceEEEEec
Q psy12803 372 ILIRNR-RVGVPIGRTATLECEVEAF-PLSVRYWEFI 406 (902)
Q Consensus 372 i~~~p~-~~~v~~G~~v~L~C~a~g~-P~P~v~W~k~ 406 (902)
+..... .+....+....|.|...+. ....+.|...
T Consensus 87 ~~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~ 123 (313)
T 2d9q_B 87 ILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPG 123 (313)
T ss_dssp EEEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECC
T ss_pred eEEEEEEccCCCCCCCccceeeECCCCccEEEEecCC
Confidence 211110 1112345678889988865 4568889643
No 478
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=98.37 E-value=5.6e-07 Score=82.51 Aligned_cols=85 Identities=12% Similarity=0.065 Sum_probs=57.2
Q ss_pred CCCEEEEcCceeeeecCceEEEEEEeeccCCc-----eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCC
Q psy12803 368 VPPQILIRNRRVGVPIGRTATLECEVEAFPLS-----VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNIS 442 (902)
Q Consensus 368 ~~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P-----~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~ 442 (902)
.+|.+...+.. .+.+|++|+|.|.+...+.. .+.|++++..+... .. ..+|.|.+|+.+
T Consensus 7 ~kP~l~~~p~~-~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~~---------~~------~~~l~i~~v~~~ 70 (108)
T 4hwn_A 7 PAPILRAVPSA-EPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQSR---------GL------SSEFQIPTASED 70 (108)
T ss_dssp CCCEEEEESCS-SCBTTCCEEEEEEC---------CCEEEEEETTEEEEEE---------ES------CCEEEESSCCGG
T ss_pred CCCEEEecCCC-cCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccCC---------Cc------ccEEEeCccCcc
Confidence 35777776653 48899999999999876544 49999887655310 11 134999999999
Q ss_pred CCeEEEEEEEeCCc---eeEEEEEEEeec
Q psy12803 443 DFDTYRCISKNEVD---IAKGSLILFESN 468 (902)
Q Consensus 443 DsG~YtC~A~N~~G---~~~~s~~L~V~~ 468 (902)
|+|.|+|.|.|..+ ..+..+.|.|..
T Consensus 71 dsG~Y~C~~~~~~~~~~~~S~~l~L~V~g 99 (108)
T 4hwn_A 71 HSGSYWCEAATEDNQVWKQSPQLEIRVQG 99 (108)
T ss_dssp GCEEEEEEEECTTSSSEEECCCEEECCBC
T ss_pred cCeEEEEEEEeCCCceeccCCCEEEEEEe
Confidence 99999999999865 223445555543
No 479
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.37 E-value=2.5e-07 Score=96.45 Aligned_cols=97 Identities=13% Similarity=0.068 Sum_probs=66.5
Q ss_pred cCceeeeecCceEEEEEEeeccCCce-----EEEEecCCeeee------cCCceEEEeecCCC-----ceeeEeEEEEec
Q psy12803 375 RNRRVGVPIGRTATLECEVEAFPLSV-----RYWEFIDGTLIE------HDGVKYSISDVDKG-----SYQYIMQLNISN 438 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~P~P~-----v~W~k~~~~l~~------~~~~~~~~~~~~~~-----s~~~~stL~I~~ 438 (902)
.+..+.+.+|++++|.|.+.+.|.+. |.|++++..... .............. ......+|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 45667899999999999999998776 999987532210 00000000000000 000123499999
Q ss_pred cCCCCCeEEEEEEEeCCceeEEEEEEEeecCCC
Q psy12803 439 VNISDFDTYRCISKNEVDIAKGSLILFESNAKT 471 (902)
Q Consensus 439 V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p~ 471 (902)
++.+|+|.|+|.|.|..+.....+.|.|..+|.
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~ 121 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPA 121 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCE
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecCCc
Confidence 999999999999999999888899999987544
No 480
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.37 E-value=1.8e-07 Score=92.76 Aligned_cols=61 Identities=16% Similarity=0.303 Sum_probs=52.6
Q ss_pred CCcEEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEeeeeecCceeEEeecC
Q psy12803 298 SSPIVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 298 ~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+....+.+|++++|.|.+.+.|.+.+.|++++..+ .....+|.|.+++.+|+|.|+|.|.|
T Consensus 104 ~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~---------~~~~~~L~i~~v~~~d~G~Y~C~a~n 164 (184)
T 2ny1_B 104 NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN---------IQGGKTLSVSQLELQDSGTWTCTVLQ 164 (184)
T ss_dssp SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE---------EEESSEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc---------ccCceEEEEecCCcCCCeEEEEEEEE
Confidence 44467899999999999999999999999976553 23467899999999999999999977
No 481
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.37 E-value=2e-06 Score=79.68 Aligned_cols=94 Identities=19% Similarity=0.214 Sum_probs=58.8
Q ss_pred cCceeeeecCceEEEEEEeecc----CCceEEEEecCCe------eeec-C-----------CceEEEeecCCCceeeEe
Q psy12803 375 RNRRVGVPIGRTATLECEVEAF----PLSVRYWEFIDGT------LIEH-D-----------GVKYSISDVDKGSYQYIM 432 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~----P~P~v~W~k~~~~------l~~~-~-----------~~~~~~~~~~~~s~~~~s 432 (902)
.+..+.+.+|++|+|.|.+... +.+.+.|++.+.. +... . ..++.+..... ....
T Consensus 5 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~ 81 (124)
T 1neu_A 5 TDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPS---WKDG 81 (124)
T ss_dssp CCSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGG---GTBC
T ss_pred cCCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCc---CCeE
Confidence 4556789999999999998643 4678999986531 1111 1 11222211000 0123
Q ss_pred EEEEeccCCCCCeEEEEEEEeCCce--eEEEEEEEeecCCC
Q psy12803 433 QLNISNVNISDFDTYRCISKNEVDI--AKGSLILFESNAKT 471 (902)
Q Consensus 433 tL~I~~V~~~DsG~YtC~A~N~~G~--~~~s~~L~V~~~p~ 471 (902)
+|.|.+++.+|+|.|+|.+.|..+. ....+.|.|...++
T Consensus 82 sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p~ 122 (124)
T 1neu_A 82 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVP 122 (124)
T ss_dssp CEEECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC---
T ss_pred EEEEccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCCC
Confidence 5999999999999999999998765 46788888876543
No 482
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.36 E-value=1.1e-06 Score=88.62 Aligned_cols=88 Identities=19% Similarity=0.209 Sum_probs=64.8
Q ss_pred cCceeeeecCceEEEEEEeec-cCCceEEEEecCCeeeec---CC-------------ceEEEeecCCCceeeEeEEEEe
Q psy12803 375 RNRRVGVPIGRTATLECEVEA-FPLSVRYWEFIDGTLIEH---DG-------------VKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g-~P~P~v~W~k~~~~l~~~---~~-------------~~~~~~~~~~~s~~~~stL~I~ 437 (902)
.+..+.+.+|++|+|.|.+.+ .+.+.|.|++++..+... .. .++.+. .+. +|.|.
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~--~~~------sL~I~ 75 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT--QSY------SLQLS 75 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC--TTC------CEEEC
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC--CCe------EEEEC
Confidence 456678999999999999975 456799999876443210 00 012221 222 39999
Q ss_pred ccCCCCCeEEEEEEEeCCceeEEEEEEEeecCC
Q psy12803 438 NVNISDFDTYRCISKNEVDIAKGSLILFESNAK 470 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G~~~~s~~L~V~~~p 470 (902)
+++.+|+|.|+|.|.|..+.....+.|.|...+
T Consensus 76 ~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~ 108 (193)
T 2if7_A 76 NLKMEDTGSYRAQISTKTSAKLSSYTLRILRQL 108 (193)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred CCCcccCceEEEEEEecCCCeEEEEEEEEEccC
Confidence 999999999999999999887778888887543
No 483
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.36 E-value=3.9e-07 Score=93.77 Aligned_cols=89 Identities=12% Similarity=0.135 Sum_probs=62.8
Q ss_pred CCCEEEEcCceee--eecCceEEEEEEeecc---CC-ceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCC
Q psy12803 368 VPPQILIRNRRVG--VPIGRTATLECEVEAF---PL-SVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNI 441 (902)
Q Consensus 368 ~~P~i~~~p~~~~--v~~G~~v~L~C~a~g~---P~-P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~ 441 (902)
.+|.+...+.... +.+|++++|.|.+.+. |. +.|.|++++..+.. ...........+.+...++|.|.+++.
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~--~~~~~~~~~~~~~~~~~~~L~I~~~~~ 85 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHT--AQTQTHREDYNSTIRVVSTLPIQHQDW 85 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECC--CEEEEEEETTTTEEEEEEEEECCHHHH
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccC--cccccccccCCCeEEEEEEEEEcHHHc
Confidence 4566665554444 7899999999999987 43 79999998865532 111111122233444567899999999
Q ss_pred CCCeEEEEEEEeCCcee
Q psy12803 442 SDFDTYRCISKNEVDIA 458 (902)
Q Consensus 442 ~DsG~YtC~A~N~~G~~ 458 (902)
+|+|.|+|.|.|..+..
T Consensus 86 ~D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 86 MSGKEFKCKVNNKDLPS 102 (218)
T ss_dssp HTTCCEEEEEEETTCSS
T ss_pred CCCCeEEEEEECCcCCC
Confidence 99999999999997754
No 484
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.35 E-value=2.5e-07 Score=94.54 Aligned_cols=63 Identities=19% Similarity=0.343 Sum_probs=50.3
Q ss_pred EEcCCeEEEEEecCCCCCCceEEecCCCcccccCCccceeccCCcEEEEee-eeecCceeEEeecC
Q psy12803 303 VREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSAVASSTLNFTRI-NRINMGAYMCLADN 367 (902)
Q Consensus 303 v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~~~~~sL~I~~V-t~~DsG~YtC~A~N 367 (902)
..+|++++|.|. +.|.|.++|+|++..+............+++|+|.+| +.+|+|.|+|.|.|
T Consensus 125 ~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N 188 (204)
T 1sy6_A 125 SISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRG 188 (204)
T ss_dssp EEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETT
T ss_pred eecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCCCEEEEeeCCccccCEEEEEEecc
Confidence 349999999999 7899999999987655332222233335789999999 99999999999999
No 485
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.35 E-value=5.6e-07 Score=93.87 Aligned_cols=94 Identities=20% Similarity=0.218 Sum_probs=64.0
Q ss_pred CEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCC----e-eeec-------CCceEEEeecCCCceeeEeEEEEe
Q psy12803 370 PQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDG----T-LIEH-------DGVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 370 P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~----~-l~~~-------~~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
..+...+..+.+.+|++|+|.|.+.+.|.+.+.|++... . +... ...++...... ...+|.|.
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~ 79 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSG-----TDYSLTIS 79 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET-----TEEEEEES
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCC-----CEEEEEEc
Confidence 345556777889999999999999999999999998642 1 1110 01122221111 12369999
Q ss_pred ccCCCCCeEEEEEEEeCCcee-EEEEEEEeec
Q psy12803 438 NVNISDFDTYRCISKNEVDIA-KGSLILFESN 468 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G~~-~~s~~L~V~~ 468 (902)
+++.+|+|.|+|.|.|..+.. .....|.|..
T Consensus 80 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 111 (250)
T 3esu_F 80 NLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRR 111 (250)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred cCChhhCEEEEEEEeeCCCceECCCEEEEEEC
Confidence 999999999999999986643 2334566654
No 486
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.35 E-value=5.5e-07 Score=82.81 Aligned_cols=71 Identities=27% Similarity=0.380 Sum_probs=50.9
Q ss_pred cCCcEEEEcCCeEEEEEecCCCCCCceEEecCCC--ccc--------ccCCccceecc------CCcEEEEeeeeecCce
Q psy12803 297 SSSPIVVREGDNVRLRCVATGHPKPSIIWKTSEN--KPI--------TLGSWKDSAVA------SSTLNFTRINRINMGA 360 (902)
Q Consensus 297 ~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~--~~~--------~~~~~~~~~~~------~~sL~I~~Vt~~DsG~ 360 (902)
.+..+.+.+|++|+|.|.+.+.+ +.+.|+|... .+. .....+..... ..+|+|.+++.+|+|.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~ 85 (113)
T 1h5b_A 7 SPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDSGT 85 (113)
T ss_dssp ECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGCEE
T ss_pred CCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhCEE
Confidence 45668899999999999998855 6899998642 111 00111222222 2289999999999999
Q ss_pred eEEeecCC
Q psy12803 361 YMCLADNV 368 (902)
Q Consensus 361 YtC~A~N~ 368 (902)
|.|.+.|.
T Consensus 86 Y~C~~~n~ 93 (113)
T 1h5b_A 86 YFCAAEAS 93 (113)
T ss_dssp EEEEEECS
T ss_pred EEEEEecC
Confidence 99999883
No 487
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.34 E-value=1.3e-06 Score=88.55 Aligned_cols=92 Identities=15% Similarity=0.134 Sum_probs=63.8
Q ss_pred CEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCC---e-eeec--------CCceEEEeecCCCceeeEeEEEEe
Q psy12803 370 PQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDG---T-LIEH--------DGVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 370 P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~---~-l~~~--------~~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
+.+...+..+.+.+|++++|.|.+.+.|.+.+.|++... . .... ...++.+.... ...+|.|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~ 76 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSG-----RDSSFTIS 76 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEES
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccC-----CEEEEEEC
Confidence 456666778899999999999999999999999988431 1 1110 11222222111 13469999
Q ss_pred ccCCCCCeEEEEEEEeCCcee-EEEEEEEe
Q psy12803 438 NVNISDFDTYRCISKNEVDIA-KGSLILFE 466 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~~G~~-~~s~~L~V 466 (902)
+++.+|+|.|+|.|.|..+.. .....|.|
T Consensus 77 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 77 SLESEDIGSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp SCCGGGCSEEEEEECSSSSCEECCCEEEEE
T ss_pred CCCcccCEEEEEecccCCceEEcCCceEEE
Confidence 999999999999999986533 34455666
No 488
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.34 E-value=6.6e-07 Score=92.49 Aligned_cols=93 Identities=18% Similarity=0.131 Sum_probs=59.5
Q ss_pred EEEcCceeeeecCceEEEEEEeeccCCceEEEEecC--Ceee--e-----------cCCceEEEeecCCCceeeEeEEEE
Q psy12803 372 ILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFID--GTLI--E-----------HDGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 372 i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~--~~l~--~-----------~~~~~~~~~~~~~~s~~~~stL~I 436 (902)
+...+..+.+.+|++|+|.|. .+.|.+.|.|+++. ..+. . ....++.+..... ...+|.|
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~L~I 77 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQ----ENFSLIL 77 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSS----SBCEEEE
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCC----ceEEEEE
Confidence 455677888999999999999 78899999999862 1110 0 0011222221111 1235999
Q ss_pred eccCCCCCeEEEEEEEeCCcee-----EEEEEEEeecC
Q psy12803 437 SNVNISDFDTYRCISKNEVDIA-----KGSLILFESNA 469 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G~~-----~~s~~L~V~~~ 469 (902)
.+++.+|+|.|+|.|.|..|.. .....|.|...
T Consensus 78 ~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~ 115 (238)
T 2p1y_A 78 ELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGS 115 (238)
T ss_dssp SSCCGGGCEEEEEEEEC------CEEECCCEEEEEECC
T ss_pred ecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEecc
Confidence 9999999999999999986531 13346666544
No 489
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.34 E-value=3.4e-06 Score=85.34 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=63.2
Q ss_pred EcCceeeeecCceEEEEEEeecc-------CCceEEEEecCCe-----eee----------cCCceEEEeecCCCceeeE
Q psy12803 374 IRNRRVGVPIGRTATLECEVEAF-------PLSVRYWEFIDGT-----LIE----------HDGVKYSISDVDKGSYQYI 431 (902)
Q Consensus 374 ~~p~~~~v~~G~~v~L~C~a~g~-------P~P~v~W~k~~~~-----l~~----------~~~~~~~~~~~~~~s~~~~ 431 (902)
..+..+.+.+|++|+|.|.+.+. +.+.+.|++++.. +.. ....++.+..... ...
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~ 81 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQ---KKN 81 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGG---GTB
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCC---CCe
Confidence 35667889999999999999864 5789999987642 111 0112333221100 012
Q ss_pred eEEEEeccCCCCCeEEEEEEEeCCceeE----EEEEEEeecCC
Q psy12803 432 MQLNISNVNISDFDTYRCISKNEVDIAK----GSLILFESNAK 470 (902)
Q Consensus 432 stL~I~~V~~~DsG~YtC~A~N~~G~~~----~s~~L~V~~~p 470 (902)
.+|.|.+++.+|+|.|+|.+.|..+... ..+.|.|...+
T Consensus 82 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~ 124 (214)
T 2zg1_A 82 CSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALI 124 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCC
T ss_pred EEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCC
Confidence 2499999999999999999999874322 46777777654
No 490
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.34 E-value=1e-06 Score=92.57 Aligned_cols=95 Identities=15% Similarity=0.204 Sum_probs=60.6
Q ss_pred CEEEEcCceeeeecCceEEEEEEee---ccCCceEEEEecCCeeeec-------C---------CceEEEeecCCCceee
Q psy12803 370 PQILIRNRRVGVPIGRTATLECEVE---AFPLSVRYWEFIDGTLIEH-------D---------GVKYSISDVDKGSYQY 430 (902)
Q Consensus 370 P~i~~~p~~~~v~~G~~v~L~C~a~---g~P~P~v~W~k~~~~l~~~-------~---------~~~~~~~~~~~~s~~~ 430 (902)
+.+...+..+.+.+|++++|.|.+. +.|.+.|.|++.+...... . ..++.+..... ..
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~ 82 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTF---HN 82 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTT---TT
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCC---CC
Confidence 4455667778899999999999998 7788899999866422110 0 01111110000 01
Q ss_pred EeEEEEeccCCCCCeEEEEEEEeCCcee--EEEEEEEee
Q psy12803 431 IMQLNISNVNISDFDTYRCISKNEVDIA--KGSLILFES 467 (902)
Q Consensus 431 ~stL~I~~V~~~DsG~YtC~A~N~~G~~--~~s~~L~V~ 467 (902)
..+|.|.+++.+|+|.|+|.|.|..+.. ...+.|.|.
T Consensus 83 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 121 (268)
T 3mj6_A 83 DGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL 121 (268)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE
T ss_pred EEEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe
Confidence 1459999999999999999999976554 455566654
No 491
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.33 E-value=6.7e-07 Score=81.47 Aligned_cols=75 Identities=19% Similarity=0.333 Sum_probs=55.4
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYR 448 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Yt 448 (902)
+|.+...+.. .+.+|++|+|.|.+.+.+ ..+.|++++..+... + .. .. ....+|.|.+|+.+|+|.|+
T Consensus 5 kP~i~~~p~~-~v~~G~~VtL~C~~~~~~-~~~~w~k~g~~~~~~---~--~~--~~---~~~~~l~I~~v~~~dsG~Y~ 72 (105)
T 2vsd_A 5 QPSLSLHPSQ-GVSLGDTVTLRCHLPRMA-AWVQLWLNGTLRFDK---E--KD--KE---QDAAEFSFAVTNLEDAGTYQ 72 (105)
T ss_dssp CCEEEEESCS-SCCTTCEEEEEEECCSSC-EEEEEEETTEEEEEE---E--EC--TT---CSEEEEEEECCSGGGCEEEE
T ss_pred CCEEEeCCCC-CcCcCCCEEEEEEcCCCC-cEEEEEECCccceee---e--cc--CC---CCEEEEEECCCCHHHCeEEE
Confidence 5777776665 689999999999998764 678898876544210 1 11 11 12356999999999999999
Q ss_pred EEEEeCC
Q psy12803 449 CISKNEV 455 (902)
Q Consensus 449 C~A~N~~ 455 (902)
|.+.|..
T Consensus 73 C~~~n~~ 79 (105)
T 2vsd_A 73 CRYQVSE 79 (105)
T ss_dssp EEEEEET
T ss_pred EEEEcCC
Confidence 9999964
No 492
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.33 E-value=6e-07 Score=95.56 Aligned_cols=105 Identities=13% Similarity=0.056 Sum_probs=48.3
Q ss_pred EEEEcCCeEEEEEecCCCCCCceEEecCCCcccccCCcccee--ccCCcEEEEeeeeecCceeEEeecC-----------
Q psy12803 301 IVVREGDNVRLRCVATGHPKPSIIWKTSENKPITLGSWKDSA--VASSTLNFTRINRINMGAYMCLADN----------- 367 (902)
Q Consensus 301 v~v~eGe~v~L~C~a~G~P~p~v~W~k~~~~~~~~~~~~~~~--~~~~sL~I~~Vt~~DsG~YtC~A~N----------- 367 (902)
..|.+|++|+|.|.+.+.+ +.+.|+|++..+.......... ..+..|.|.+|+ |+|.|+|.|.|
T Consensus 116 ~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S 192 (257)
T 1b6u_A 116 PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSS 192 (257)
T ss_dssp TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCC
T ss_pred CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCC
Confidence 3578999999999998854 6899999887654322111111 125689999998 99999999986
Q ss_pred --------CCCEEEEc-CceeeeecCceEEEEEEeeccCCceEEEEecCCe
Q psy12803 368 --------VPPQILIR-NRRVGVPIGRTATLECEVEAFPLSVRYWEFIDGT 409 (902)
Q Consensus 368 --------~~P~i~~~-p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~~ 409 (902)
.+|.+... +.......|..+.|.|.+ |.+.+.|.|...+-.
T Consensus 193 ~pl~L~V~g~p~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~~~~~ 242 (257)
T 1b6u_A 193 DPLLVSVTGNPSNSWPSPTEPSSETGNPRHLHAAA-EQKLISEEDLNLDLV 242 (257)
T ss_dssp CCEEECCBCCC----------------------------------------
T ss_pred CCEEEEEeccCCCCCCCCcccCccCCCeEEEEEEE-cchHHHHHHhhhhhc
Confidence 11111100 111234457778888744 667788889766543
No 493
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.33 E-value=2.4e-07 Score=91.41 Aligned_cols=80 Identities=20% Similarity=0.258 Sum_probs=61.1
Q ss_pred CCEEEEcCceeeeecCceEEEEEEeeccCCc-eEEEEecCCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEE
Q psy12803 369 PPQILIRNRRVGVPIGRTATLECEVEAFPLS-VRYWEFIDGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTY 447 (902)
Q Consensus 369 ~P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P-~v~W~k~~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~Y 447 (902)
+|.+...+..+.+.+|++++|.|.+.+.|.+ .+.|++++..+.. .. .+|.|.+++.+|+|.|
T Consensus 4 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~-----------~~------~~L~i~~v~~~d~G~Y 66 (176)
T 1f2q_A 4 KPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE-----------TN------SSLNIVNAKFEDSGEY 66 (176)
T ss_dssp CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC-----------CS------SEEEECSCCGGGCEEE
T ss_pred CCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC-----------Cc------eEEEEeccceecCEEE
Confidence 5777778888889999999999999999876 6999987755421 11 2499999999999999
Q ss_pred EEEEEeCCceeEEEEEEEee
Q psy12803 448 RCISKNEVDIAKGSLILFES 467 (902)
Q Consensus 448 tC~A~N~~G~~~~s~~L~V~ 467 (902)
+|.|.|..++.. +.|.|.
T Consensus 67 ~C~~~~~~~s~~--~~l~V~ 84 (176)
T 1f2q_A 67 KCQHQQVNESEP--VYLEVF 84 (176)
T ss_dssp EEECTTSSCCCC--EEEEEE
T ss_pred EEEcCCcccccc--EEEEEe
Confidence 999999776554 444544
No 494
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.33 E-value=6.6e-07 Score=94.30 Aligned_cols=93 Identities=17% Similarity=0.135 Sum_probs=61.0
Q ss_pred cCceeeeecCceEEEEEEeeccC--CceEEEEecC--Ce--eee-c-----------CCceEEEeecCCCceeeEeEEEE
Q psy12803 375 RNRRVGVPIGRTATLECEVEAFP--LSVRYWEFID--GT--LIE-H-----------DGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 375 ~p~~~~v~~G~~v~L~C~a~g~P--~P~v~W~k~~--~~--l~~-~-----------~~~~~~~~~~~~~s~~~~stL~I 436 (902)
.+..+.+.+|++|+|.|.+.+.| .+.|.|++++ .. .+. . ...++.+...... ...+|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~---~~~~L~I 82 (257)
T 1f3r_B 6 ESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSK---NQVFLKM 82 (257)
T ss_dssp EECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTT---TEEEEEE
T ss_pred CCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCC---CEEEEEE
Confidence 34456799999999999999885 6899999863 11 110 0 0122332221101 1346999
Q ss_pred eccCCCCCeEEEEEEEeCCc-------ee--EEEEEEEeecCC
Q psy12803 437 SNVNISDFDTYRCISKNEVD-------IA--KGSLILFESNAK 470 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G-------~~--~~s~~L~V~~~p 470 (902)
.+++.+|+|.|+|.|.|..| .. ...+.|.|...+
T Consensus 83 ~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~ 125 (257)
T 1f3r_B 83 NSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGG 125 (257)
T ss_dssp ESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSC
T ss_pred CCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCC
Confidence 99999999999999999864 11 234567776543
No 495
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.33 E-value=1.6e-06 Score=79.23 Aligned_cols=80 Identities=19% Similarity=0.258 Sum_probs=57.0
Q ss_pred CEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCC----e-eeecC-------CceEEEeecCCCceeeEeEEEEe
Q psy12803 370 PQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDG----T-LIEHD-------GVKYSISDVDKGSYQYIMQLNIS 437 (902)
Q Consensus 370 P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~----~-l~~~~-------~~~~~~~~~~~~s~~~~stL~I~ 437 (902)
+.+...+..+.+.+|++|+|.|.+.+.+.+.+.|++... . +.... ..++.+.... ...+|.|.
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~-----~~~~L~I~ 78 (109)
T 2q20_A 4 IQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSG-----TDFTFTIS 78 (109)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET-----TEEEEEES
T ss_pred ccEEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccC-----CEEEEEEC
Confidence 345556777889999999999999988888999998752 1 11110 1223222111 13469999
Q ss_pred ccCCCCCeEEEEEEEeC
Q psy12803 438 NVNISDFDTYRCISKNE 454 (902)
Q Consensus 438 ~V~~~DsG~YtC~A~N~ 454 (902)
+++.+|+|.|.|.+.|.
T Consensus 79 ~v~~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 79 SLQPEDIATYYCQQYDN 95 (109)
T ss_dssp SCCGGGCEEEEEEECSS
T ss_pred CCChhhCEEEEEEEeeC
Confidence 99999999999999875
No 496
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.32 E-value=1.5e-06 Score=88.15 Aligned_cols=91 Identities=16% Similarity=0.117 Sum_probs=62.7
Q ss_pred EEEcCceeeeecCceEEEEEEeeccCCceEEEEecCC--ee--ee--------cCCceEEEeecCCCceeeEeEEEEecc
Q psy12803 372 ILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDG--TL--IE--------HDGVKYSISDVDKGSYQYIMQLNISNV 439 (902)
Q Consensus 372 i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~--~l--~~--------~~~~~~~~~~~~~~s~~~~stL~I~~V 439 (902)
+.. +..+.+.+|++++|.|.+.+.|.+.|.|+++.. .+ +. ....++.+.... ...+|.|.++
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~L~I~~v 77 (210)
T 1lk3_L 4 LTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSG-----TDFTLTIDPV 77 (210)
T ss_dssp EEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET-----TEEEEEESSC
T ss_pred EEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecC-----CEEEEEECCC
Confidence 344 778889999999999999999989999988532 11 11 001222222111 1246999999
Q ss_pred CCCCCeEEEEEEEeCCceeE-EEEEEEeec
Q psy12803 440 NISDFDTYRCISKNEVDIAK-GSLILFESN 468 (902)
Q Consensus 440 ~~~DsG~YtC~A~N~~G~~~-~s~~L~V~~ 468 (902)
+.+|+|.|+|.|.|..+... ....|.|..
T Consensus 78 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 107 (210)
T 1lk3_L 78 EADDTAIYFCQQSWNGPLTFGAGTKLELKR 107 (210)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred CHHHCeEEEEEEEcCCCceeCCCEEEEEcC
Confidence 99999999999999877543 234566654
No 497
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.32 E-value=1.9e-07 Score=95.48 Aligned_cols=84 Identities=13% Similarity=0.057 Sum_probs=56.3
Q ss_pred cCceeeeecC--ceEEEEEEeeccCCceEEEEec--CCeeeecCCceEEEeecCCCceeeEeEEEEeccCCCCCeEEEEE
Q psy12803 375 RNRRVGVPIG--RTATLECEVEAFPLSVRYWEFI--DGTLIEHDGVKYSISDVDKGSYQYIMQLNISNVNISDFDTYRCI 450 (902)
Q Consensus 375 ~p~~~~v~~G--~~v~L~C~a~g~P~P~v~W~k~--~~~l~~~~~~~~~~~~~~~~s~~~~stL~I~~V~~~DsG~YtC~ 450 (902)
.+..+.+.+| ++++|.|.+.+ |.+.+.|++. ++.++... .++... ... .|.|.+++.+|+|.|+|.
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~-~~~~~~--~~~------~l~I~~v~~~D~G~Y~C~ 82 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDG-NRISWD--SKK------GFTIPSYMISYAGMVFCE 82 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCS-SSCEEE--TTT------EEEEEGGGTTTCSEEEEE
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCC-Cccccc--CCc------cEEEccCChhcCceEEEE
Confidence 3467889999 99999999986 7799999885 44443322 222221 112 399999999999999999
Q ss_pred EEeCCceeEE-EEEEEeec
Q psy12803 451 SKNEVDIAKG-SLILFESN 468 (902)
Q Consensus 451 A~N~~G~~~~-s~~L~V~~ 468 (902)
|.|..+.... .+.|.|..
T Consensus 83 a~n~~~~~~s~~~~l~v~~ 101 (213)
T 2x1w_L 83 AKINDESYQSIMYIVVVVG 101 (213)
T ss_dssp EC----CEECCCEEEEECB
T ss_pred EEECCeeEEEEEEEEEEeC
Confidence 9996544332 26666643
No 498
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.32 E-value=1e-06 Score=92.76 Aligned_cols=96 Identities=16% Similarity=0.128 Sum_probs=64.4
Q ss_pred CEEEEcCceeeeecCceEEEEEEeeccCCceEEEEecCC--e--eee-c--------CCceEEEeecCCCceeeEeEEEE
Q psy12803 370 PQILIRNRRVGVPIGRTATLECEVEAFPLSVRYWEFIDG--T--LIE-H--------DGVKYSISDVDKGSYQYIMQLNI 436 (902)
Q Consensus 370 P~i~~~p~~~~v~~G~~v~L~C~a~g~P~P~v~W~k~~~--~--l~~-~--------~~~~~~~~~~~~~s~~~~stL~I 436 (902)
..+...+..+.+.+|++|+|.|.+.+.|.+.+.|++... . .+. . ...++.+...... ...+|.|
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~sL~I 80 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSD---SSFHLRK 80 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTT---TEEEEEE
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCC---CEEEEEE
Confidence 456667778899999999999999999999999988431 1 110 0 0111222111111 1346999
Q ss_pred eccCCCCCeEEEEEEEeCCce----eEEEEEEEeec
Q psy12803 437 SNVNISDFDTYRCISKNEVDI----AKGSLILFESN 468 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G~----~~~s~~L~V~~ 468 (902)
.+++.+|+|.|+|.|.|..+. ....+.|.|..
T Consensus 81 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (256)
T 3tf7_C 81 ASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSP 116 (256)
T ss_dssp SSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC
T ss_pred CCCCcccCEEEEEEEecCCCccceEECCCeEEEEeC
Confidence 999999999999999998652 22345666664
No 499
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.31 E-value=6.3e-07 Score=85.52 Aligned_cols=72 Identities=14% Similarity=0.251 Sum_probs=52.4
Q ss_pred eecCCcEEEEcCCeEEEEEecCCCCCCceEEecCC--Ccc--cccCCccceeccC---CcEEEEeeeeecCceeEEeecC
Q psy12803 295 IFSSSPIVVREGDNVRLRCVATGHPKPSIIWKTSE--NKP--ITLGSWKDSAVAS---STLNFTRINRINMGAYMCLADN 367 (902)
Q Consensus 295 i~~~~~v~v~eGe~v~L~C~a~G~P~p~v~W~k~~--~~~--~~~~~~~~~~~~~---~sL~I~~Vt~~DsG~YtC~A~N 367 (902)
+..+..+.+.+|++|+|.|.+.+. +.+.|+|+. ..+ +.....+.....+ .+|+|.+++.+|+|.|.|.+.|
T Consensus 21 ~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~n 98 (133)
T 3khq_A 21 WQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQKC 98 (133)
T ss_dssp EEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEESS
T ss_pred EEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEEe
Confidence 345667889999999999999987 899999973 211 1111222222222 2699999999999999999988
Q ss_pred C
Q psy12803 368 V 368 (902)
Q Consensus 368 ~ 368 (902)
.
T Consensus 99 ~ 99 (133)
T 3khq_A 99 D 99 (133)
T ss_dssp C
T ss_pred C
Confidence 4
No 500
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.31 E-value=1.9e-06 Score=86.82 Aligned_cols=92 Identities=16% Similarity=0.183 Sum_probs=59.5
Q ss_pred CceeeeecCceEEEEEEeeccCCc---eEEEEecCCeeeecC--Cc------------eEEEee--cCCCceeeEeEEEE
Q psy12803 376 NRRVGVPIGRTATLECEVEAFPLS---VRYWEFIDGTLIEHD--GV------------KYSISD--VDKGSYQYIMQLNI 436 (902)
Q Consensus 376 p~~~~v~~G~~v~L~C~a~g~P~P---~v~W~k~~~~l~~~~--~~------------~~~~~~--~~~~s~~~~stL~I 436 (902)
+..+.+.+|++|+|.|.+.+.|.+ .|.|++++..+.... .. +..... ..........+|.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 445778999999999999988766 478999876553210 00 011000 00000111345999
Q ss_pred eccCCCCCeEEEEEEEeCCceeEEE-EEEEee
Q psy12803 437 SNVNISDFDTYRCISKNEVDIAKGS-LILFES 467 (902)
Q Consensus 437 ~~V~~~DsG~YtC~A~N~~G~~~~s-~~L~V~ 467 (902)
.+++.+|+|.|+|.|.|..+..... ..+.+.
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~ 119 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVI 119 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeee
Confidence 9999999999999999987766443 344443
Done!