BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12804
(182 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P55037|GLTB_SYNY3 Ferredoxin-dependent glutamate synthase 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=gltB PE=1 SV=1
Length = 1550
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 62 IGEVARNSEPFMRQVFLT---GKQDEEEFKRQIYVLRKVSTHKI--PKPGQRFYICSLSN 116
+GE A SEPFM+QV++ G D+ +F+R++YV+RK++ I PK +Y+ SLS
Sbjct: 159 LGETAIASEPFMQQVYIARPEGLTDDLDFERKLYVIRKLTHGAIRSPKIDTYWYVASLSA 218
Query: 117 RIVVYKGQFTADQLWKYFTDLN 138
R +VYKG T Q+ +Y+ +L+
Sbjct: 219 RTLVYKGMLTTAQVGQYYPELH 240
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 138 NIIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFYIQKL 181
+I+E ++ + + HRGAC C+ ++GDGAG+L+ +PH F IQK+
Sbjct: 58 DIVEQGLQMLVNLEHRGACGCEPNTGDGAGILIQVPHKF-IQKI 100
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 16 SVVEEVRDEYLGPAASGLYDPANEREACGVGFIVAIDRKRSH 57
+V + +L P GLYDP NE +ACGVGFIV + K SH
Sbjct: 16 TVTSPMNSSHLAPQVQGLYDPQNEHDACGVGFIVQMKGKVSH 57
>sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic OS=Medicago sativa PE=1
SV=1
Length = 2194
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 8/84 (9%)
Query: 59 SAGIGEVARNSEPFMRQVFLTGKQDEE-EFKRQIYVLRKVSTHKIPKPGQ-------RFY 110
+ G+G+ A+ +EP + QVFLT D + + ++Q+Y+LRK+S I FY
Sbjct: 212 NTGLGKSAQLTEPVIEQVFLTPSSDSKVDLEKQMYILRKLSMVSITSALNLQSDGITDFY 271
Query: 111 ICSLSNRIVVYKGQFTADQLWKYF 134
ICSLS+R V+YKGQ T QL +Y+
Sbjct: 272 ICSLSSRTVIYKGQLTPAQLGEYY 295
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 140 IEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFY 177
+ DA ++ +RM HRGAC C+ ++GDGAG+LVA+PH FY
Sbjct: 119 VTDALEMLVRMTHRGACGCEANTGDGAGILVALPHGFY 156
Score = 37.4 bits (85), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 13 AVESVVEEVRDEYLGPAASGLYDPANEREACGVGFIVAIDRKRSHKS 59
AV+S V D+ +G LYDPA ++++CGVGF+ ++ + S K+
Sbjct: 77 AVKSSFSAVPDKPMG-----LYDPAFDKDSCGVGFVAELNGQSSRKT 118
>sp|Q0DG35|GLT2_ORYSJ Glutamate synthase 2 [NADH], chloroplastic OS=Oryza sativa subsp.
japonica GN=Os05g0555600 PE=2 SV=2
Length = 2188
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 45 VGFIVAIDRKRSHKSAGIGEVARNSEPFMRQVFLT-GKQDEEEFKRQIYVLRKVSTHKI- 102
+G V R+ ++G+G+ A ++EP + QVF+T + +F+RQ+YVLR+ S I
Sbjct: 206 LGHTVLGWRRVPTDNSGLGQSAVDTEPVIEQVFVTKSASSKADFERQMYVLRRFSVMSIR 265
Query: 103 ----PKPG--QRFYICSLSNRIVVYKGQFTADQLWKYF 134
K G + FY+CSLS+R +VYKGQ QL YF
Sbjct: 266 EVLGVKNGGTKDFYMCSLSSRTIVYKGQLKPSQLKGYF 303
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 140 IEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFY 177
++DA ++ RM HRGAC C+ ++GDGAG+LVA+PH F+
Sbjct: 124 VDDAIEMLDRMAHRGACGCEKNTGDGAGILVALPHNFF 161
Score = 37.7 bits (86), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 32 GLYDPANEREACGVGFIVAIDRKRSHKS 59
GLYDP+ ER++CGVGFI + + S K+
Sbjct: 96 GLYDPSMERDSCGVGFIAELSGEYSRKT 123
>sp|Q9LV03|GLUT1_ARATH Glutamate synthase 1 [NADH], chloroplastic OS=Arabidopsis thaliana
GN=GLT1 PE=1 SV=2
Length = 2208
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 8/84 (9%)
Query: 59 SAGIGEVARNSEPFMRQVFLT-GKQDEEEFKRQIYVLRKVSTHKIPKP-------GQRFY 110
++G+G A +EP + QVFLT + + +F++Q+Y+LR+VS I + FY
Sbjct: 230 NSGLGNSALQTEPIIAQVFLTPTTKSKADFEQQMYILRRVSMVAIRAALNLQHGAMKDFY 289
Query: 111 ICSLSNRIVVYKGQFTADQLWKYF 134
ICSLS+R +VYKGQ DQL Y+
Sbjct: 290 ICSLSSRTIVYKGQLKPDQLKDYY 313
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 135 TDLNIIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFYIQ 179
T + D+ ++ +RM HRGAC C++++GDGAG+LV +PH FY +
Sbjct: 129 TTRKTVTDSLEMLIRMTHRGACGCESNTGDGAGILVGLPHDFYAE 173
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 7 TAEQSTAVESVVEEVRDEYLGPAASGLYDPANEREACGVGFIVAIDRKRSHKS 59
+A+ T V+S V ++ LG LYDP+ ++++CGVGF+ + + + K+
Sbjct: 86 SAKLRTVVKSSFSAVPEKPLG-----LYDPSYDKDSCGVGFVAELSGETTRKT 133
>sp|Q0JKD0|GLT1_ORYSJ Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp.
japonica GN=Os01g0681900 PE=2 SV=1
Length = 2167
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 39 EREACGVGFIVAIDRKRSHKSAGIGEVARNSEPFMRQVFLT-GKQDEEEFKRQIYVLRKV 97
++ A +G ++ R+ ++ +GE A +EP + QVFLT E +F++Q+Y+LR++
Sbjct: 193 QKVAESLGHVILGWRRVPTDNSDLGESALQTEPVIEQVFLTKSSSSEADFEQQLYILRRL 252
Query: 98 STHKIP------KPGQR-FYICSLSNRIVVYKGQFTADQLWKYF 134
S I + G+R FY+CSLS+R +VYKGQ QL Y+
Sbjct: 253 SILSIRAALNLRRGGKRDFYMCSLSSRTIVYKGQLKPCQLKGYY 296
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 140 IEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFY 177
+ DA ++ RM HRGAC C+ ++GDGAG+LVA+PH F+
Sbjct: 117 VNDALEMLERMAHRGACGCEKNTGDGAGILVALPHNFF 154
Score = 37.4 bits (85), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 19 EEVRDEYLGPAAS-GLYDPANEREACGVGFIVAI--DRKRS 56
E VR P +S GLYDP+ ER++CGVGF+ + D KR+
Sbjct: 75 EPVRPLSTLPESSIGLYDPSRERDSCGVGFVAELSGDYKRA 115
>sp|Q9C102|GLT1_SCHPO Putative glutamate synthase [NADPH] OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=glt1 PE=2 SV=1
Length = 2111
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 62 IGEVARNSEPFMRQ--VFLTGKQDEEE------FKRQIYVLRKVSTHKIPKPGQRFYICS 113
+G A + EP + Q V L D E F+RQ+YVLRK S+H I K + FYICS
Sbjct: 185 LGPAALSREPTILQPCVVLKAAYDGEAEFDTDLFERQLYVLRKQSSHLIGKE-KWFYICS 243
Query: 114 LSNRIVVYKGQFTADQLWKYFTDLNIIE 141
L +VYKGQ Q++ YF DLN E
Sbjct: 244 LHRETIVYKGQLAPVQVYNYFLDLNNAE 271
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 139 IIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAF 176
I+ DA L M HRGA D GDGAGV+ +P+ F
Sbjct: 85 IVTDARLLLCNMTHRGATGADTRDGDGAGVMTGMPYTF 122
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 28 PAASGLYDPANEREACGVGFIVAIDRKRSHK 58
P A LYDPA E+++CGVGF I + SHK
Sbjct: 54 PKAQALYDPAYEKDSCGVGFTCHIKGQVSHK 84
>sp|P39812|GLTA_BACSU Glutamate synthase [NADPH] large chain OS=Bacillus subtilis (strain
168) GN=gltA PE=2 SV=3
Length = 1520
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 62 IGEVARNSEPFMRQVFLTGKQDEEE---FKRQIYVLRKVSTHKIPKPGQRFYICSLSNRI 118
IG VA+ S PF+RQVF+ D ++ F+R++YV+RK + + G FY SLS++
Sbjct: 136 IGTVAQKSCPFVRQVFIGASSDLKDNLSFERKLYVIRKQAENWGVTEGLDFYFASLSSQT 195
Query: 119 VVYKGQFTADQLWKYFTDL 137
+VYKG T +Q+ +++DL
Sbjct: 196 IVYKGLLTPEQVDAFYSDL 214
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 138 NIIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFY 177
+I++ K+ +++HRG D D+GDGAG+LV IP AF+
Sbjct: 37 DIVKQGLKMLCQLDHRGGQGSDPDTGDGAGLLVQIPDAFF 76
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 28 PAASGLYDPANEREACGVGFIVAIDRKRSH 57
P A GLY P E +ACG+G + K++H
Sbjct: 7 PKAQGLYRPEFEHDACGIGLYAHLKGKQTH 36
>sp|Q12680|GLT1_YEAST Glutamate synthase [NADH] OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GLT1 PE=1 SV=2
Length = 2145
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 59 SAGIGEVARNSEPFMRQVFLTGKQDEEE-------FKRQIYVLRKVSTHKIPKPGQRFYI 111
S +G+VA + EP + Q L DE++ F+ Q+Y+LRK ++ +I FY+
Sbjct: 171 STILGDVALSREPTILQPLLVPLYDEKQPEFNETKFRTQLYLLRKEASLQIGLENW-FYV 229
Query: 112 CSLSNRIVVYKGQFTADQLWKYFTDL 137
CSL+N +VYKGQ T Q++ Y+ DL
Sbjct: 230 CSLNNTTIVYKGQLTPAQVYNYYPDL 255
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 139 IIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAF 176
I+ DA L + M HRGA + D + GDGAG+L+ IPH F
Sbjct: 70 IVTDARYLLVNMTHRGAVSSDGN-GDGAGILLGIPHEF 106
Score = 37.7 bits (86), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 28 PAASGLYDPANEREACGVGFIVAIDRKRSHK 58
P GLYDP E +ACGVGF+ ++SHK
Sbjct: 39 PDKRGLYDPDYEHDACGVGFVANKHGEQSHK 69
>sp|Q05755|GLTB_AZOBR Glutamate synthase [NADPH] large chain OS=Azospirillum brasilense
GN=gltB PE=1 SV=1
Length = 1515
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 62 IGEVARNSEPFMRQVFLTGKQ--DEEEFKRQIYVLRKVSTHKIPKPGQ--RFYICSLSNR 117
IGE A + P + Q+ + + +E+F+ +Y++R+ K K Q FYICSLS R
Sbjct: 153 IGEKANATRPEIEQIIVGNNKGVSDEQFELDLYIIRR-RIEKAVKGEQINDFYICSLSAR 211
Query: 118 IVVYKGQFTADQLWKYFTDL 137
++YKG F A+QL ++ DL
Sbjct: 212 SIIYKGMFLAEQLTTFYPDL 231
Score = 37.4 bits (85), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 152 HRGACACDNDSGDGAGVLVAIPHAFY 177
HRGA D +GDGAG+ VA+P F+
Sbjct: 66 HRGAVDADGKTGDGAGIHVAVPQKFF 91
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 6 MTAEQSTAVESVVEEVRDEYLGPAASGLYDPANEREACGVGFIVAIDRK 54
MT E + E V + R + Y+P +E +ACGVGFI AID K
Sbjct: 1 MTTELNQG-EQFVADFRANAAALTTANAYNPEDEHDACGVGFIAAIDGK 48
>sp|P96218|GLTB_MYCTU Glutamate synthase [NADPH] large chain OS=Mycobacterium
tuberculosis GN=gltB PE=1 SV=3
Length = 1527
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 62 IGEVARNSEPFMRQVFLTGKQDEEEFKRQIYVLRKVSTHKIPK--PGQ------RFYICS 113
+G ++R++ P RQVFL G +R+ YV+RK + H++ PGQ Y S
Sbjct: 131 LGALSRDAMPTFRQVFLAGASGMA-LERRCYVVRKRAEHELGTKGPGQDGPGRETVYFPS 189
Query: 114 LSNRIVVYKGQFTADQLWKYFTDL 137
LS + +VYKG T QL ++ DL
Sbjct: 190 LSGQTLVYKGMLTTPQLKAFYLDL 213
Score = 36.6 bits (83), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 138 NIIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAF 176
+I++ A + + HRGA + SGDGAG+L+ +P F
Sbjct: 33 DIVDKAITALLNLEHRGAQGAEPRSGDGAGILIQVPDEF 71
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 26 LGPAASGLYDPANEREACGVGFIVAIDRKRS 56
+ P GLY+PA E ++CGV +V + +RS
Sbjct: 1 MTPKRVGLYNPAFEHDSCGVAMVVDMHGRRS 31
>sp|Q9ZNZ7|GLTB1_ARATH Ferredoxin-dependent glutamate synthase 1, chloroplastic
OS=Arabidopsis thaliana GN=GLU1 PE=1 SV=2
Length = 1648
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 62 IGEVARNSEPFMRQVFL-TGKQDE-EEFKRQIYVLRKVSTHKIPKP--GQRFYICSLSNR 117
+G+ AR + P ++QVF+ K+D ++ +R++Y+ RK+ + G Y CSLSN+
Sbjct: 248 VGKNARETMPNIQQVFVKIAKEDSTDDIERELYICRKLIERAVATESWGTELYFCSLSNQ 307
Query: 118 IVVYKGQFTADQLWKYFTDL 137
+VYKG ++ L ++ DL
Sbjct: 308 TIVYKGMLRSEALGLFYLDL 327
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 139 IIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFY 177
+++DA M HRG C DNDSGDG+G++ +IP F+
Sbjct: 148 VVKDALIALGCMEHRGGCGADNDSGDGSGLMSSIPWDFF 186
Score = 30.8 bits (68), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 31 SGLYDPANEREACGVGFIVAIDRKRSH 57
+ L D +ER ACGVGFI +D SH
Sbjct: 120 ANLEDILSERGACGVGFIANLDNIPSH 146
>sp|P55038|GLTS_SYNY3 Ferredoxin-dependent glutamate synthase 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=gltS PE=1 SV=2
Length = 1556
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 27/44 (61%)
Query: 136 DLNIIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFYIQ 179
D ++E A K M HRG C+ DNDSGDGAGV+ AIP Q
Sbjct: 50 DHTLVEQALKALGCMEHRGGCSADNDSGDGAGVMTAIPRELLAQ 93
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 62 IGEVARNSEPFMRQVFLTGKQD--EEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIV 119
+G A+N++P + Q+ +T + +E R++Y+ R + K+ + FY+CS S R +
Sbjct: 153 LGIQAKNNQPHIEQILVTCPEGCAGDELDRRLYIARSIIGKKL---AEDFYVCSFSCRTI 209
Query: 120 VYKGQFTADQLWKYFTDL 137
VYKG + L +++ DL
Sbjct: 210 VYKGMVRSIILGEFYLDL 227
>sp|Q69RJ0|GLTB_ORYSJ Ferredoxin-dependent glutamate synthase, chloroplastic OS=Oryza
sativa subsp. japonica GN=GLU PE=2 SV=2
Length = 1615
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 62 IGEVARNSEPFMRQVFL-TGKQDE-EEFKRQIYVLRKV--STHKIPKPGQRFYICSLSNR 117
+G A+ + P ++Q+F+ K+D ++ +R++Y+ RK+ K Y CSLS+R
Sbjct: 213 VGRYAKETMPNIQQIFVKVAKEDNADDIERELYICRKLIERATKSASWADELYFCSLSSR 272
Query: 118 IVVYKGQFTADQLWKYFTDL 137
+VYKG ++ L +++ DL
Sbjct: 273 TIVYKGMLRSEILGQFYLDL 292
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 137 LNIIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFY 177
NI+ DA M HRG C DNDSGDG+G++ IP +
Sbjct: 111 FNIVRDALVALGCMEHRGGCGADNDSGDGSGLMSGIPWDLF 151
>sp|O19906|GLTB_CYACA Ferredoxin-dependent glutamate synthase OS=Cyanidium caldarium
GN=gltB PE=3 SV=1
Length = 1549
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 150 MNHRGACACDNDSGDGAGVLVAIPHAFYIQ 179
M HRGAC+ D +SGDGAG+L +IP F+++
Sbjct: 64 MEHRGACSADEESGDGAGILFSIPWKFFVE 93
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 47 FIVAIDRKRSHKSAGIGEVARNSEPFMRQVFLTGKQDE-EEFKRQIY-VLRKVS---THK 101
FIV R+ + +G +A + P + Q+ + K+ + +Y V RK+ T +
Sbjct: 138 FIVIGWREVPYVKEVLGPLALRNMPQIYQIVVQSKRYQGRSLDFHLYRVRRKIEKEITVR 197
Query: 102 IPKPGQRFYICSLSNRIVVYKGQFTADQLWKYFTDL 137
+ FY CS SN +VYKG + L +++ DL
Sbjct: 198 AYSWAKDFYFCSCSNHTIVYKGMVKSTSLGQFYQDL 233
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 39 EREACGVGFIVAIDRKRSHK 58
E++ACGVGFI +D K HK
Sbjct: 33 EKDACGVGFIAHLDNKFGHK 52
>sp|Q43155|GLTB_SPIOL Ferredoxin-dependent glutamate synthase, chloroplastic OS=Spinacia
oleracea PE=1 SV=3
Length = 1517
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 139 IIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFY 177
I++DA M HRG C DNDSGDG+GV+ AIP +
Sbjct: 17 IVKDALTALGCMEHRGGCGSDNDSGDGSGVMTAIPWDLF 55
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Query: 62 IGEVARNSEPFMRQVF--LTGKQDEEEFKRQIYVLRKV-----STHKIPKPGQRFYICSL 114
+G A+ + P ++QVF + + ++ +R++Y+ RK+ S+H Y CSL
Sbjct: 117 VGRNAKETMPNIQQVFVRIIKEDSTDDIERELYICRKLIERAASSHTW---ASELYFCSL 173
Query: 115 SNRIVVYKGQFTADQLWKYFTDL 137
SN+ ++YKG ++ L ++ DL
Sbjct: 174 SNQTIIYKGMLRSEVLGMFYYDL 196
>sp|P23225|GLTB_MAIZE Ferredoxin-dependent glutamate synthase, chloroplastic OS=Zea mays
GN=GLSF PE=1 SV=1
Length = 1616
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 62 IGEVARNSEPFMRQVFL-TGKQDE-EEFKRQIYVLRKV--STHKIPKPGQRFYICSLSNR 117
+G A+ + P ++Q+F+ K+D ++ +R++Y+ RK+ K Y CSLS+R
Sbjct: 214 VGRNAKETMPNIQQIFVKVAKEDNADDIERELYISRKLIERAAKSFSWADELYFCSLSSR 273
Query: 118 IVVYKGQFTADQLWKYFTDL 137
+VYKG ++ L +++ DL
Sbjct: 274 TIVYKGMLRSEVLGQFYLDL 293
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 132 KYFTDLNIIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFY 177
K + +I+ DA M HRG C D+DSGDGAG++ A+P +
Sbjct: 107 KNMSSFDIVRDALMALGCMEHRGGCGADSDSGDGAGLMSAVPWDLF 152
>sp|Q08258|GLTB_HORVU Ferredoxin-dependent glutamate synthase (Fragment) OS=Hordeum
vulgare PE=1 SV=2
Length = 436
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 137 LNIIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFY 177
N++ DA M HRG C DNDSGDGAG++ IP +
Sbjct: 15 FNVVRDALTALGCMEHRGGCGADNDSGDGAGLMSGIPWDLF 55
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 63 GEVARNSEPFMRQVF--LTGKQDEEEFKRQIYVLRKV--STHKIPKPGQRFYICSLSNRI 118
G A+ + P + Q+F + + D ++ +R++Y+ RK+ K Y CSLS+R
Sbjct: 118 GRNAKETMPNILQIFVRIAKEDDADDIERELYICRKLIERATKSASWADELYFCSLSSRT 177
Query: 119 VVYKGQFTADQLWKYFTDL 137
++YKG ++ L +++ DL
Sbjct: 178 IIYKGMLRSEVLGQFYLDL 196
>sp|Q1XDB2|GLTB_PORYE Ferredoxin-dependent glutamate synthase OS=Porphyra yezoensis
GN=gltB PE=3 SV=1
Length = 1538
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 139 IIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFYIQKLR 182
+++ E L+ M HRGAC+ D DSGDGAG+ AIP + + L+
Sbjct: 51 VVQALEALTC-MEHRGACSADRDSGDGAGITTAIPWNLFQKSLQ 93
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 62 IGEVARNSEPFMRQVFL-TGKQDEEEFKRQIYVLRKVSTHKIPKPGQ----RFYICSLSN 116
+G+ A ++P + QVF + ++ ++Q++++RK I G+ FYICSLS
Sbjct: 148 LGKQAYLNKPHVEQVFCKSSNLSKDRLEQQLFLVRKKIEKYIGINGKDWAHEFYICSLSC 207
Query: 117 RIVVYKGQFTADQLWKYFTDL 137
+VYKG + L +++ DL
Sbjct: 208 YTIVYKGMMRSAVLGQFYQDL 228
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 30 ASGLYDPANEREACGVGFIVAIDRKRSHK 58
+S L ER+ACGVGFI ++ +HK
Sbjct: 21 SSSLISIEKERDACGVGFIADVNNVANHK 49
>sp|P09831|GLTB_ECOLI Glutamate synthase [NADPH] large chain OS=Escherichia coli (strain
K12) GN=gltB PE=1 SV=3
Length = 1486
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 62 IGEVARNSEPFMRQVFLTGKQD--EEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIV 119
+GE+A +S P + Q+F+ + +R++++ R+ ++ + + FY+CSLSN +
Sbjct: 126 LGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIARRRIEKRL-EADKDFYVCSLSNLVN 184
Query: 120 VYKGQFTADQLWKYFTDL 137
+YKG L +++ DL
Sbjct: 185 IYKGLCMPTDLPRFYLDL 202
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 149 RMNHRGACACDNDSGDGAGVLVAIPHAFY 177
RM HRGA D +GDG G+L+ P F+
Sbjct: 38 RMQHRGAILADGKTGDGCGLLLQKPDRFF 66
Score = 30.4 bits (67), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 33 LYDPANEREACGVGFIVAIDRKRSHK 58
LYD + ER+ CG G I I+ + SHK
Sbjct: 2 LYDKSLERDNCGFGLIAHIEGEPSHK 27
>sp|P51375|GLTB_PORPU Ferredoxin-dependent glutamate synthase OS=Porphyra purpurea
GN=gltB PE=3 SV=1
Length = 1538
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 139 IIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFYIQKLR 182
+++ E L+ M HRGAC+ D DSGDGAG+ AIP + L+
Sbjct: 51 VVQALEALTC-MEHRGACSADRDSGDGAGITTAIPWNLFQSGLK 93
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 62 IGEVARNSEPFMRQVFL-TGKQDEEEFKRQIYVLRKVSTHKIPKPGQR----FYICSLSN 116
+G+ A ++P + Q+F + + E ++Q++++RK I G+ FY+CSLS
Sbjct: 148 LGKQAYLNKPHVEQMFCRSSNLSKNELEQQLFLVRKKIERYIGINGKEWAHEFYVCSLSC 207
Query: 117 RIVVYKGQFTADQLWKYFTDL 137
+VYKG + L +++ DL
Sbjct: 208 YTIVYKGMMRSAVLGQFYQDL 228
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 15 ESVVEEVRDEYLGP--AASGLYDPANEREACGVGFIVAIDRKRSHK 58
+ ++E+ + G +S L ER+ACGVGFI ++ +HK
Sbjct: 4 QKIIEQASGKLTGSLTKSSSLVSIEKERDACGVGFIADVNNIANHK 49
>sp|Q06434|GLTB_ANTSP Ferredoxin-dependent glutamate synthase OS=Antithamnion sp. GN=gltB
PE=3 SV=1
Length = 1536
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 62 IGEVARNSEPFMRQVFL-TGKQDEEEFKRQIYVLRKVSTHKIPK----PGQRFYICSLSN 116
+GE ++ ++P + Q + + + + + +Y++RK + K ++FYICS S+
Sbjct: 144 LGEESKFNQPLVVQCIVRSNNLIDYKLDKHLYLVRKKIEKLVSKLDINTNKQFYICSFSS 203
Query: 117 RIVVYKGQFTADQLWKYFTDLN 138
+ +VYKG ++ L KY+ DL+
Sbjct: 204 KTIVYKGMLRSEFLVKYYNDLS 225
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 150 MNHRGACACDNDSGDGAGVLVAIPHAFYIQK 180
M HRG C DN SGDGAGV + IP +I +
Sbjct: 54 MEHRGGCGADNISGDGAGVTIQIPWDIFISE 84
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 31 SGLYDPANEREACGVGFIVAIDRKRSHK 58
SG +ER+ACGVGFI ++ K S+K
Sbjct: 15 SGYPSIVSERDACGVGFIANLNSKPSNK 42
>sp|Q9T0P4|GLTB2_ARATH Ferredoxin-dependent glutamate synthase 2, chloroplastic
OS=Arabidopsis thaliana GN=GLU2 PE=1 SV=2
Length = 1629
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 62 IGEVARNSEPFMRQVFLTGKQDE--EEFKRQIYVLRKVSTHKIPKP--GQRFYICSLSNR 117
+G A+ + P QVF+ +D+ ++ +R++Y+ RK+ + Y SLSN+
Sbjct: 224 VGHNAKQTMPNTEQVFVRIVKDDKVDDVERELYICRKLIERAVASESWASELYFSSLSNQ 283
Query: 118 IVVYKGQFTADQLWKYFTDLNIIEDAEKLSMRMNHR 153
+VYKG ++ L ++ DL D K + HR
Sbjct: 284 TIVYKGMLRSEVLGLFYPDLQ--NDLYKSPFAIYHR 317
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 139 IIEDAEKLSMRMNHRGACACDNDSGDGAGVLVAIPHAFY 177
I+ DA M HRG C DN SGDG+G++ +IP +
Sbjct: 124 IVNDALIALGCMEHRGGCGSDNTSGDGSGLMTSIPWDLF 162
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 26 LGPAASGLYDPANEREACGVGFIVAIDRKRSHK 58
L P + L D +ER ACGVGFI ++ K +HK
Sbjct: 91 LKPQVAYLEDIISERGACGVGFIANLENKATHK 123
>sp|O01761|UNC89_CAEEL Muscle M-line assembly protein unc-89 OS=Caenorhabditis elegans
GN=unc-89 PE=1 SV=3
Length = 8081
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 54 KRSHKSAGIGEVARNSEPFMRQVFLTGKQDEEEFKRQIYVLRKVSTHKIPKPGQR 108
K SH SA V + PF+ + G+ D + + Y +K++T +P P R
Sbjct: 6226 KNSHGSASSSAVLDVTVPFLDSIKFNGEIDVTPYLTEEYGFKKLNTASLPTPPDR 6280
>sp|B5A435|STPS1_SANAL Sesquiterpene synthase OS=Santalum album PE=1 SV=1
Length = 559
Score = 30.4 bits (67), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 51 IDRKRSHK-SAGIGEVARNSEPFMRQVFLTGKQDEEEFKRQIYVLRK------VSTHKIP 103
+D RSHK G VA E +M+Q +T ++ +EF++Q+ K + +++P
Sbjct: 455 MDDMRSHKFEQERGHVASGIECYMKQYGVTEEEAHDEFRKQLVKAWKDINEECLRPYRVP 514
Query: 104 KPGQRFYICSLSNRI-VVYKGQ 124
KP I +L+ I V+YK +
Sbjct: 515 KP-LLMRILNLTRVIDVIYKNE 535
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,744,742
Number of Sequences: 539616
Number of extensions: 2531965
Number of successful extensions: 5699
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5613
Number of HSP's gapped (non-prelim): 73
length of query: 182
length of database: 191,569,459
effective HSP length: 110
effective length of query: 72
effective length of database: 132,211,699
effective search space: 9519242328
effective search space used: 9519242328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)