Query psy12805
Match_columns 1429
No_of_seqs 999 out of 5071
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 20:13:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12805.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12805hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ea0_A Glutamate synthase [NAD 100.0 1E-230 5E-235 2201.2 72.9 976 10-1020 201-1460(1479)
2 1ofd_A Ferredoxin-dependent gl 100.0 1E-228 5E-233 2186.0 75.3 977 10-1022 197-1499(1520)
3 1ofd_A Ferredoxin-dependent gl 100.0 1.9E-36 6.4E-41 394.3 12.1 463 493-1092 539-1059(1520)
4 1ea0_A Glutamate synthase [NAD 100.0 2.4E-36 8.3E-41 392.6 12.6 442 493-1092 543-1024(1479)
5 3vkj_A Isopentenyl-diphosphate 100.0 4E-30 1.4E-34 301.4 12.5 296 368-720 41-364 (368)
6 3sr7_A Isopentenyl-diphosphate 100.0 2.3E-28 7.7E-33 285.9 17.9 272 369-701 69-357 (365)
7 1vcf_A Isopentenyl-diphosphate 99.9 2.2E-21 7.4E-26 225.0 16.7 268 369-693 41-327 (332)
8 4b1b_A TRXR, thioredoxin reduc 99.9 3.7E-21 1.3E-25 236.5 18.1 181 1211-1401 188-382 (542)
9 1p0k_A Isopentenyl-diphosphate 99.8 1.2E-20 4.2E-25 220.0 17.2 282 369-719 38-348 (349)
10 2nzl_A Hydroxyacid oxidase 1; 99.8 2.5E-19 8.7E-24 212.0 17.1 275 370-697 78-382 (392)
11 2nli_A Lactate oxidase; flavoe 99.8 1.1E-18 3.9E-23 205.0 18.3 313 323-692 14-355 (368)
12 1kbi_A Cytochrome B2, L-LCR; f 99.8 3.4E-18 1.2E-22 208.4 20.5 276 369-692 172-474 (511)
13 2eq6_A Pyruvate dehydrogenase 99.8 4E-18 1.4E-22 205.2 16.6 184 1210-1402 133-333 (464)
14 2a8x_A Dihydrolipoyl dehydroge 99.8 4.3E-18 1.5E-22 204.5 16.0 183 1210-1401 136-332 (464)
15 2hqm_A GR, grase, glutathione 99.7 6.6E-18 2.3E-22 204.1 16.9 184 1210-1402 150-346 (479)
16 3dk9_A Grase, GR, glutathione 99.7 8.2E-18 2.8E-22 202.8 17.5 185 1210-1402 150-355 (478)
17 2qae_A Lipoamide, dihydrolipoy 99.7 7E-18 2.4E-22 202.8 16.3 184 1210-1402 138-339 (468)
18 1ojt_A Surface protein; redox- 99.7 5.5E-18 1.9E-22 204.8 15.3 184 1210-1402 150-348 (482)
19 3dgz_A Thioredoxin reductase 2 99.7 7.2E-18 2.5E-22 204.1 16.2 184 1210-1401 149-350 (488)
20 1zmd_A Dihydrolipoyl dehydroge 99.7 8.1E-18 2.8E-22 202.6 16.4 185 1210-1402 142-344 (474)
21 2wpf_A Trypanothione reductase 99.7 6.4E-18 2.2E-22 205.4 15.2 181 1211-1401 158-353 (495)
22 1fec_A Trypanothione reductase 99.7 7E-18 2.4E-22 204.7 15.5 181 1211-1401 154-349 (490)
23 3lad_A Dihydrolipoamide dehydr 99.7 9.8E-18 3.4E-22 201.8 16.6 184 1210-1402 144-342 (476)
24 1dxl_A Dihydrolipoamide dehydr 99.7 6.3E-18 2.2E-22 203.0 14.8 184 1210-1402 141-341 (470)
25 3ic9_A Dihydrolipoamide dehydr 99.7 1.2E-17 4E-22 202.8 17.1 186 1211-1404 139-339 (492)
26 4eqs_A Coenzyme A disulfide re 99.7 4.1E-18 1.4E-22 203.9 12.7 177 1209-1401 105-309 (437)
27 1ges_A Glutathione reductase; 99.7 9.8E-18 3.3E-22 201.1 15.5 183 1210-1402 133-327 (450)
28 1v59_A Dihydrolipoamide dehydr 99.7 1.3E-17 4.3E-22 201.0 16.5 186 1210-1402 147-349 (478)
29 1ypf_A GMP reductase; GUAC, pu 99.7 1.2E-17 4.2E-22 194.0 15.6 172 507-701 133-326 (336)
30 1gox_A (S)-2-hydroxy-acid oxid 99.7 3.3E-17 1.1E-21 192.8 19.1 268 370-692 55-351 (370)
31 3qfa_A Thioredoxin reductase 1 99.7 1.4E-17 4.9E-22 203.4 16.2 186 1210-1401 175-378 (519)
32 1ebd_A E3BD, dihydrolipoamide 99.7 1.8E-17 6.1E-22 198.6 16.3 183 1210-1401 135-331 (455)
33 3urh_A Dihydrolipoyl dehydroge 99.7 1.5E-17 5.3E-22 201.2 15.8 184 1210-1402 160-362 (491)
34 4gcm_A TRXR, thioredoxin reduc 99.7 2.3E-17 8E-22 186.6 16.3 195 1205-1406 99-307 (312)
35 3dgh_A TRXR-1, thioredoxin red 99.7 2.5E-17 8.4E-22 199.0 17.0 183 1210-1401 152-350 (483)
36 1onf_A GR, grase, glutathione 99.7 3.7E-17 1.3E-21 198.7 18.4 182 1210-1402 143-370 (500)
37 2qr6_A IMP dehydrogenase/GMP r 99.7 2.4E-17 8.1E-22 195.3 15.6 173 514-698 203-391 (393)
38 2c6q_A GMP reductase 2; TIM ba 99.7 2.6E-17 8.9E-22 192.3 15.5 283 370-700 35-346 (351)
39 2r9z_A Glutathione amide reduc 99.7 2.5E-17 8.7E-22 198.3 15.8 182 1210-1401 132-325 (463)
40 4a5l_A Thioredoxin reductase; 99.7 2.5E-17 8.7E-22 185.4 14.7 188 1211-1406 112-313 (314)
41 1xdi_A RV3303C-LPDA; reductase 99.7 2.2E-17 7.7E-22 200.3 14.7 180 1210-1401 146-340 (499)
42 4dna_A Probable glutathione re 99.7 3.2E-17 1.1E-21 197.1 15.6 183 1210-1402 135-330 (463)
43 1mo9_A ORF3; nucleotide bindin 99.7 3.5E-17 1.2E-21 200.1 16.2 184 1210-1402 176-377 (523)
44 3l8k_A Dihydrolipoyl dehydroge 99.7 3.6E-17 1.2E-21 196.9 15.7 182 1210-1402 134-332 (466)
45 1p4c_A L(+)-mandelate dehydrog 99.7 9.7E-17 3.3E-21 189.4 18.4 262 370-692 56-349 (380)
46 1zk7_A HGII, reductase, mercur 99.7 8.5E-17 2.9E-21 193.4 16.8 180 1210-1402 140-333 (467)
47 1eep_A Inosine 5'-monophosphat 99.7 2.5E-16 8.6E-21 187.2 19.9 185 507-700 178-387 (404)
48 2x8g_A Thioredoxin glutathione 99.7 1.8E-16 6.3E-21 196.4 18.2 187 1210-1402 251-458 (598)
49 3sgz_A Hydroxyacid oxidase 2; 99.7 5.7E-16 1.9E-20 180.2 19.8 135 513-691 208-342 (352)
50 2cdu_A NADPH oxidase; flavoenz 99.7 1E-16 3.4E-21 192.0 13.8 179 1210-1401 107-315 (452)
51 3o0h_A Glutathione reductase; 99.7 1.2E-16 4E-21 193.3 14.1 182 1210-1402 156-350 (484)
52 1lvl_A Dihydrolipoamide dehydr 99.7 8E-17 2.7E-21 193.6 12.2 181 1210-1402 136-329 (458)
53 4fk1_A Putative thioredoxin re 99.7 7.2E-17 2.5E-21 182.7 10.5 190 1205-1407 100-302 (304)
54 2yqu_A 2-oxoglutarate dehydrog 99.7 2.3E-16 7.8E-21 189.1 15.3 182 1210-1402 131-326 (455)
55 2bc0_A NADH oxidase; flavoprot 99.7 1.5E-16 5E-21 192.9 13.8 179 1209-1401 138-359 (490)
56 3oc4_A Oxidoreductase, pyridin 99.7 1.2E-16 4E-21 191.6 11.3 178 1210-1401 105-312 (452)
57 2vdc_G Glutamate synthase [NAD 99.7 2E-16 6.8E-21 190.8 12.8 162 1240-1411 263-450 (456)
58 3cty_A Thioredoxin reductase; 99.6 7.5E-16 2.6E-20 174.6 15.6 188 1210-1407 116-318 (319)
59 3cgb_A Pyridine nucleotide-dis 99.6 8.2E-16 2.8E-20 185.9 15.4 180 1209-1401 141-351 (480)
60 2q0l_A TRXR, thioredoxin reduc 99.6 1.6E-15 5.5E-20 170.8 16.4 188 1210-1406 104-310 (311)
61 1fl2_A Alkyl hydroperoxide red 99.6 1.4E-15 4.6E-20 171.3 15.8 188 1210-1408 105-308 (310)
62 3f8d_A Thioredoxin reductase ( 99.6 1.5E-15 5E-20 170.6 16.0 190 1210-1409 115-321 (323)
63 3iwa_A FAD-dependent pyridine 99.6 1.1E-15 3.6E-20 184.1 15.4 181 1209-1401 114-327 (472)
64 3r9u_A Thioredoxin reductase; 99.6 1.5E-15 5.1E-20 170.3 15.5 189 1210-1407 108-314 (315)
65 3ntd_A FAD-dependent pyridine 99.6 1.3E-15 4.6E-20 186.8 15.4 184 1209-1401 106-336 (565)
66 3ef6_A Toluene 1,2-dioxygenase 99.6 8.5E-16 2.9E-20 182.0 12.8 185 1209-1402 100-308 (410)
67 2q7v_A Thioredoxin reductase; 99.6 2.9E-15 9.8E-20 170.2 16.5 189 1210-1409 113-316 (325)
68 1xhc_A NADH oxidase /nitrite r 99.6 7.1E-16 2.4E-20 180.5 11.7 172 1210-1401 103-295 (367)
69 3lxd_A FAD-dependent pyridine 99.6 1.8E-15 6.3E-20 179.0 15.3 185 1210-1402 109-320 (415)
70 1vdc_A NTR, NADPH dependent th 99.6 2.1E-15 7.1E-20 171.5 14.8 195 1210-1413 114-331 (333)
71 2gqw_A Ferredoxin reductase; f 99.6 1.2E-15 4.2E-20 180.7 13.2 177 1209-1402 102-307 (408)
72 1trb_A Thioredoxin reductase; 99.6 3.6E-15 1.2E-19 168.3 16.2 191 1210-1408 106-317 (320)
73 2ywl_A Thioredoxin reductase r 99.6 2.8E-15 9.5E-20 156.7 13.1 157 1243-1411 3-177 (180)
74 3fg2_P Putative rubredoxin red 99.6 3.3E-15 1.1E-19 176.4 15.2 184 1210-1401 100-308 (404)
75 3kd9_A Coenzyme A disulfide re 99.6 2.3E-15 7.9E-20 180.1 13.7 178 1210-1401 104-313 (449)
76 3klj_A NAD(FAD)-dependent dehy 99.6 3.9E-16 1.3E-20 184.1 6.8 167 1210-1402 106-293 (385)
77 4g6h_A Rotenone-insensitive NA 99.6 2.8E-15 9.5E-20 182.9 14.2 152 1242-1403 218-399 (502)
78 2v3a_A Rubredoxin reductase; a 99.6 3.2E-15 1.1E-19 175.1 14.0 179 1210-1401 103-304 (384)
79 2zbw_A Thioredoxin reductase; 99.6 7.5E-15 2.6E-19 167.0 16.5 171 1240-1418 151-330 (335)
80 3itj_A Thioredoxin reductase 1 99.6 5.2E-15 1.8E-19 167.5 15.0 188 1210-1407 132-337 (338)
81 1q1r_A Putidaredoxin reductase 99.6 3.8E-15 1.3E-19 177.8 14.4 186 1210-1401 104-317 (431)
82 1nhp_A NADH peroxidase; oxidor 99.6 3E-15 1E-19 179.0 13.3 180 1209-1401 104-314 (447)
83 3ics_A Coenzyme A-disulfide re 99.6 3.9E-15 1.3E-19 184.1 13.8 179 1209-1401 141-351 (588)
84 2a87_A TRXR, TR, thioredoxin r 99.6 3.2E-15 1.1E-19 171.0 11.9 190 1210-1408 116-319 (335)
85 1gte_A Dihydropyrimidine dehyd 99.6 9.6E-15 3.3E-19 191.9 17.9 184 1209-1405 276-508 (1025)
86 3fbs_A Oxidoreductase; structu 99.6 4.8E-15 1.6E-19 164.7 12.8 182 1210-1408 102-295 (297)
87 1m6i_A Programmed cell death p 99.5 1.1E-14 3.8E-19 176.8 13.1 184 1210-1401 134-350 (493)
88 3lzw_A Ferredoxin--NADP reduct 99.5 1.8E-14 6.2E-19 162.6 12.3 189 1210-1409 113-319 (332)
89 3ab1_A Ferredoxin--NADP reduct 99.5 4.8E-14 1.6E-18 162.7 15.3 165 1240-1411 162-334 (360)
90 1hyu_A AHPF, alkyl hydroperoxi 99.5 7.2E-14 2.5E-18 170.9 12.3 187 1210-1407 316-518 (521)
91 3r2g_A Inosine 5'-monophosphat 99.5 1.8E-13 6E-18 160.0 14.8 171 508-702 126-325 (361)
92 3sx6_A Sulfide-quinone reducta 99.5 7.1E-13 2.4E-17 158.2 18.6 195 1209-1411 101-350 (437)
93 4fo4_A Inosine 5'-monophosphat 99.4 8.3E-13 2.8E-17 154.9 16.8 274 364-700 23-341 (366)
94 3h28_A Sulfide-quinone reducta 99.4 1.3E-12 4.3E-17 155.6 18.2 194 1209-1410 98-338 (430)
95 3hyw_A Sulfide-quinone reducta 99.4 5.4E-13 1.8E-17 159.1 14.3 124 1281-1412 200-340 (430)
96 1me8_A Inosine-5'-monophosphat 99.4 1.6E-13 5.6E-18 167.4 9.8 185 510-701 270-479 (503)
97 3khj_A Inosine-5-monophosphate 99.4 1.1E-12 3.7E-17 153.9 15.6 173 508-701 131-338 (361)
98 1vrd_A Inosine-5'-monophosphat 99.4 8.2E-13 2.8E-17 160.8 13.1 183 508-699 263-467 (494)
99 1cjc_A Protein (adrenodoxin re 99.3 2.5E-12 8.6E-17 155.2 13.3 192 1209-1408 95-398 (460)
100 4a9w_A Monooxygenase; baeyer-v 99.3 6.1E-13 2.1E-17 151.1 6.9 184 1210-1406 122-353 (357)
101 3vrd_B FCCB subunit, flavocyto 99.3 1.6E-12 5.3E-17 152.6 10.4 123 1282-1412 203-331 (401)
102 3d1c_A Flavin-containing putat 99.3 7.9E-12 2.7E-16 143.8 13.2 190 1210-1406 133-340 (369)
103 3h8l_A NADH oxidase; membrane 99.3 2.4E-11 8.1E-16 143.3 14.1 181 1209-1406 102-337 (409)
104 3usb_A Inosine-5'-monophosphat 99.2 3.3E-11 1.1E-15 147.4 13.5 173 508-700 282-487 (511)
105 1lqt_A FPRA; NADP+ derivative, 99.2 1.3E-11 4.3E-16 149.0 9.5 189 1209-1407 97-389 (456)
106 1jcn_A Inosine monophosphate d 99.2 7.2E-11 2.5E-15 144.5 15.7 177 508-693 281-481 (514)
107 4avf_A Inosine-5'-monophosphat 99.2 4.2E-11 1.4E-15 145.8 13.2 174 508-701 255-466 (490)
108 3k30_A Histamine dehydrogenase 99.2 2.6E-11 8.9E-16 153.2 10.2 183 1210-1415 478-685 (690)
109 4fxs_A Inosine-5'-monophosphat 99.2 4.1E-11 1.4E-15 146.1 10.7 173 508-700 257-464 (496)
110 3ffs_A Inosine-5-monophosphate 99.2 6.7E-11 2.3E-15 140.1 11.9 173 508-701 170-377 (400)
111 1o94_A Tmadh, trimethylamine d 99.1 5.4E-11 1.8E-15 151.3 10.5 182 1210-1408 481-703 (729)
112 3i65_A Dihydroorotate dehydrog 99.1 1.7E-10 5.9E-15 136.8 12.9 178 479-695 198-411 (415)
113 2gag_A Heterotetrameric sarcos 99.1 2.5E-10 8.6E-15 149.4 15.2 178 1210-1406 243-445 (965)
114 2cu0_A Inosine-5'-monophosphat 99.1 1E-10 3.6E-15 142.2 10.2 176 509-696 255-455 (486)
115 1jub_A Dihydroorotate dehydrog 99.1 6.7E-10 2.3E-14 127.3 15.0 151 506-695 142-308 (311)
116 3zwt_A Dihydroorotate dehydrog 99.1 5.6E-10 1.9E-14 131.2 14.3 156 503-695 194-364 (367)
117 4af0_A Inosine-5'-monophosphat 99.1 8.9E-10 3E-14 132.8 15.9 166 508-693 307-522 (556)
118 1zfj_A Inosine monophosphate d 99.1 2.5E-10 8.7E-15 138.8 11.4 177 508-693 259-460 (491)
119 1y56_A Hypothetical protein PH 99.1 2.1E-10 7.2E-15 139.4 10.5 153 1210-1404 209-376 (493)
120 3oix_A Putative dihydroorotate 99.0 1E-09 3.6E-14 127.9 14.6 157 502-696 172-342 (345)
121 1tv5_A Dhodehase, dihydroorota 99.0 6.3E-10 2.2E-14 133.5 13.0 177 479-695 196-439 (443)
122 2e6f_A Dihydroorotate dehydrog 99.0 1.5E-09 5E-14 124.7 13.9 151 506-696 144-311 (314)
123 4ef8_A Dihydroorotate dehydrog 99.0 1.9E-09 6.6E-14 126.0 13.4 157 502-697 172-345 (354)
124 3s5w_A L-ornithine 5-monooxyge 99.0 1.8E-09 6.2E-14 129.0 12.1 193 1210-1409 182-453 (463)
125 1gte_A Dihydropyrimidine dehyd 98.9 4.5E-09 1.5E-13 138.4 16.4 154 505-697 686-855 (1025)
126 1ep3_A Dihydroorotate dehydrog 98.9 6.2E-09 2.1E-13 118.8 12.8 148 506-694 148-305 (311)
127 1ps9_A 2,4-dienoyl-COA reducta 98.9 4.6E-09 1.6E-13 132.3 12.1 168 1209-1400 456-671 (671)
128 2xve_A Flavin-containing monoo 98.9 5.3E-09 1.8E-13 126.2 11.9 175 1210-1411 156-343 (464)
129 1ao0_A Glutamine phosphoribosy 98.8 1.1E-08 3.8E-13 123.7 9.4 122 12-165 65-199 (459)
130 3tjx_A Dihydroorotate dehydrog 98.7 1.2E-07 4.2E-12 110.8 16.1 153 505-696 176-344 (354)
131 2cul_A Glucose-inhibited divis 98.7 5.2E-08 1.8E-12 106.6 11.8 157 1242-1404 4-231 (232)
132 2gv8_A Monooxygenase; FMO, FAD 98.7 1.8E-08 6.2E-13 120.4 8.1 169 1210-1401 167-358 (447)
133 1ecf_A Glutamine phosphoribosy 98.7 2.2E-08 7.6E-13 122.4 8.6 134 13-165 67-214 (504)
134 1xff_A D-fructose-6-, glucosam 98.6 3E-08 1E-12 109.9 7.8 123 12-165 66-197 (240)
135 1f76_A Dihydroorotate dehydrog 98.5 2E-07 6.7E-12 108.2 10.0 122 502-628 182-323 (336)
136 3bo9_A Putative nitroalkan dio 98.4 5.3E-07 1.8E-11 104.4 11.2 98 513-632 116-214 (326)
137 2z6i_A Trans-2-enoyl-ACP reduc 98.4 4.2E-07 1.4E-11 105.5 9.3 99 513-633 102-201 (332)
138 2uva_G Fatty acid synthase bet 98.3 4.5E-07 1.5E-11 125.4 7.0 205 381-633 582-805 (2060)
139 2bpl_A Glucosamine--fructose-6 98.2 2.4E-06 8.3E-11 106.7 9.0 128 13-171 67-203 (608)
140 2gjl_A Hypothetical protein PA 98.2 3.4E-06 1.2E-10 97.5 9.5 102 512-632 109-210 (328)
141 3bw2_A 2-nitropropane dioxygen 98.1 1.9E-05 6.5E-10 92.8 13.8 107 512-632 136-246 (369)
142 1vhn_A Putative flavin oxidore 98.1 3.3E-06 1.1E-10 97.3 7.2 146 506-691 110-267 (318)
143 3mdn_A Glutamine aminotransfer 98.0 7.4E-06 2.5E-10 92.8 7.4 130 14-161 84-228 (274)
144 1mzh_A Deoxyribose-phosphate a 97.7 0.00014 5E-09 79.9 12.2 100 507-625 101-206 (225)
145 2uv8_G Fatty acid synthase sub 97.7 1E-05 3.5E-10 111.5 3.4 204 382-634 590-813 (2051)
146 3b0p_A TRNA-dihydrouridine syn 97.7 0.00016 5.4E-09 84.6 12.2 114 506-628 110-230 (350)
147 3gwf_A Cyclohexanone monooxyge 97.6 9.8E-05 3.3E-09 91.0 9.1 81 1325-1406 369-458 (540)
148 1rp0_A ARA6, thiazole biosynth 97.6 9.5E-05 3.2E-09 83.2 7.7 161 1242-1407 40-277 (284)
149 3gr7_A NADPH dehydrogenase; fl 97.5 0.00034 1.2E-08 81.5 10.8 106 510-628 197-312 (340)
150 1wv2_A Thiazole moeity, thiazo 97.4 0.0028 9.6E-08 70.7 16.9 139 497-685 111-249 (265)
151 1z41_A YQJM, probable NADH-dep 97.3 0.00091 3.1E-08 77.8 12.3 106 509-628 196-312 (338)
152 1y0e_A Putative N-acetylmannos 97.3 0.00076 2.6E-08 73.1 10.3 102 510-626 106-207 (223)
153 1w4x_A Phenylacetone monooxyge 97.3 0.00036 1.2E-08 85.7 8.4 81 1325-1407 376-468 (542)
154 3hgj_A Chromate reductase; TIM 97.2 0.0015 5E-08 76.4 12.1 108 510-628 205-323 (349)
155 3zen_D Fatty acid synthase; tr 97.0 0.00018 6.1E-09 102.9 2.4 208 382-633 428-656 (3089)
156 3l5l_A Xenobiotic reductase A; 97.0 0.0026 8.8E-08 74.7 11.8 112 506-628 203-330 (363)
157 3kru_A NADH:flavin oxidoreduct 96.9 0.0027 9.3E-08 74.1 11.0 106 510-628 196-312 (343)
158 3ngj_A Deoxyribose-phosphate a 96.9 0.0027 9.2E-08 70.5 10.4 102 506-627 125-233 (239)
159 2gou_A Oxidoreductase, FMN-bin 96.9 0.0029 1E-07 74.4 10.9 101 510-628 214-327 (365)
160 3q58_A N-acetylmannosamine-6-p 96.8 0.002 6.7E-08 71.2 8.3 98 509-627 117-214 (229)
161 3uox_A Otemo; baeyer-villiger 96.8 0.0015 5.2E-08 80.5 8.0 59 1209-1267 136-211 (545)
162 1jgt_A Beta-lactam synthetase; 96.8 0.0026 8.8E-08 78.1 9.7 109 15-164 38-161 (513)
163 3igs_A N-acetylmannosamine-6-p 96.8 0.0027 9.3E-08 70.2 8.9 99 508-627 116-214 (232)
164 1vyr_A Pentaerythritol tetrani 96.8 0.0051 1.7E-07 72.3 11.6 101 510-628 214-328 (364)
165 4ab4_A Xenobiotic reductase B; 96.7 0.0037 1.3E-07 73.5 9.6 95 510-628 206-313 (362)
166 1ct9_A Asparagine synthetase B 96.7 0.0026 9E-08 78.7 8.6 113 13-164 43-164 (553)
167 1yxy_A Putative N-acetylmannos 96.7 0.004 1.4E-07 68.1 9.1 98 510-627 120-219 (234)
168 3gka_A N-ethylmaleimide reduct 96.7 0.004 1.4E-07 73.2 9.6 95 510-628 214-321 (361)
169 2r14_A Morphinone reductase; H 96.5 0.0053 1.8E-07 72.5 9.2 102 510-628 219-333 (377)
170 2htm_A Thiazole biosynthesis p 96.4 0.021 7.3E-07 63.9 13.0 131 506-685 109-240 (268)
171 3oa3_A Aldolase; structural ge 96.4 0.013 4.5E-07 66.5 11.1 106 506-628 156-268 (288)
172 2hsa_B 12-oxophytodienoate red 96.3 0.01 3.5E-07 70.7 10.5 110 510-628 224-353 (402)
173 3aty_A Tcoye, prostaglandin F2 96.3 0.0075 2.6E-07 71.3 9.1 100 509-628 229-341 (379)
174 3ndo_A Deoxyribose-phosphate a 96.3 0.018 6.2E-07 63.6 11.4 102 506-626 110-222 (231)
175 3r12_A Deoxyribose-phosphate a 96.3 0.024 8.3E-07 63.6 12.5 103 506-627 141-249 (260)
176 3l5a_A NADH/flavin oxidoreduct 96.3 0.011 3.8E-07 70.8 10.4 109 510-628 224-351 (419)
177 1icp_A OPR1, 12-oxophytodienoa 96.2 0.0055 1.9E-07 72.3 7.5 103 510-628 220-335 (376)
178 1xm3_A Thiazole biosynthesis p 96.1 0.063 2.1E-06 60.3 14.6 102 538-684 138-239 (264)
179 4ap3_A Steroid monooxygenase; 96.0 0.013 4.6E-07 72.2 9.7 57 1209-1267 148-217 (549)
180 3fpz_A Thiazole biosynthetic e 95.9 0.00016 5.6E-09 82.5 -7.4 136 1240-1405 182-325 (326)
181 1ps9_A 2,4-dienoyl-COA reducta 95.9 0.014 4.8E-07 73.5 9.0 109 510-628 194-315 (671)
182 2nv1_A Pyridoxal biosynthesis 95.8 0.0026 9E-08 72.8 1.7 35 594-628 207-243 (305)
183 2zbt_A Pyridoxal biosynthesis 95.6 0.011 3.9E-07 67.0 6.2 69 594-695 207-277 (297)
184 4b63_A L-ornithine N5 monooxyg 95.6 0.11 3.6E-06 63.4 15.0 76 1323-1398 392-481 (501)
185 1ub3_A Aldolase protein; schif 95.4 0.07 2.4E-06 58.6 11.5 99 506-624 101-206 (220)
186 2e5v_A L-aspartate oxidase; ar 95.4 0.0016 5.5E-08 78.8 -1.7 176 1210-1406 166-370 (472)
187 3vnd_A TSA, tryptophan synthas 95.3 0.12 4E-06 58.4 13.1 122 506-630 78-242 (267)
188 4adt_A Pyridoxine biosynthetic 95.2 0.016 5.5E-07 66.3 5.7 104 514-628 116-243 (297)
189 1te5_A Conserved hypothetical 95.2 0.0054 1.8E-07 68.8 1.7 123 14-161 74-228 (257)
190 1o94_A Tmadh, trimethylamine d 95.1 0.03 1E-06 71.4 8.4 110 510-628 202-326 (729)
191 1p1x_A Deoxyribose-phosphate a 95.1 0.025 8.6E-07 63.6 6.7 98 508-618 117-222 (260)
192 1vcv_A Probable deoxyribose-ph 95.1 0.092 3.1E-06 57.9 11.0 112 506-624 96-221 (226)
193 3k30_A Histamine dehydrogenase 94.9 0.024 8.1E-07 71.8 6.7 124 495-628 187-329 (690)
194 1vzw_A Phosphoribosyl isomeras 94.9 0.047 1.6E-06 59.9 8.1 75 537-628 149-227 (244)
195 1yad_A Regulatory protein TENI 94.8 0.079 2.7E-06 57.4 9.4 75 539-627 122-196 (221)
196 1rd5_A Tryptophan synthase alp 94.7 0.24 8.3E-06 55.1 13.2 107 508-630 130-237 (262)
197 2a4a_A Deoxyribose-phosphate a 94.6 0.082 2.8E-06 60.0 9.3 96 509-618 142-249 (281)
198 3nav_A Tryptophan synthase alp 94.6 0.17 5.7E-06 57.3 11.8 122 506-630 80-244 (271)
199 3qja_A IGPS, indole-3-glycerol 94.6 0.14 4.9E-06 57.8 11.3 101 506-628 147-247 (272)
200 3f4w_A Putative hexulose 6 pho 94.5 0.062 2.1E-06 57.5 7.8 103 507-627 89-191 (211)
201 3kkj_A Amine oxidase, flavin-c 94.5 0.027 9.3E-07 58.5 4.9 44 1365-1409 289-332 (336)
202 3tdn_A FLR symmetric alpha-bet 94.5 0.042 1.4E-06 60.6 6.5 77 536-628 37-113 (247)
203 2vdc_G Glutamate synthase [NAD 94.5 0.0027 9.4E-08 76.6 -3.3 57 1240-1298 11-67 (456)
204 3tjl_A NADPH dehydrogenase; OL 94.4 0.043 1.5E-06 65.4 6.6 122 494-628 197-351 (407)
205 2ekc_A AQ_1548, tryptophan syn 94.3 0.24 8.3E-06 55.4 12.3 36 594-630 206-241 (262)
206 2y88_A Phosphoribosyl isomeras 94.2 0.082 2.8E-06 57.8 8.0 76 537-628 152-230 (244)
207 1qo2_A Molecule: N-((5-phospho 93.9 0.11 3.9E-06 56.8 8.3 77 536-628 146-228 (241)
208 1geq_A Tryptophan synthase alp 93.8 0.15 5E-06 56.1 9.0 36 594-629 191-226 (248)
209 2w6r_A Imidazole glycerol phos 93.6 0.083 2.8E-06 58.6 6.8 74 537-628 159-234 (266)
210 1h5y_A HISF; histidine biosynt 93.6 0.1 3.5E-06 56.7 7.3 75 538-628 158-232 (253)
211 3tsm_A IGPS, indole-3-glycerol 93.4 0.23 7.9E-06 56.2 9.9 102 505-628 153-254 (272)
212 3k7m_X 6-hydroxy-L-nicotine ox 93.3 0.075 2.6E-06 62.3 5.9 93 1281-1380 204-306 (431)
213 2qjg_A Putative aldolase MJ040 93.2 0.28 9.4E-06 54.7 10.1 92 510-627 134-241 (273)
214 3oz2_A Digeranylgeranylglycero 93.2 0.35 1.2E-05 55.0 11.2 41 1368-1408 274-319 (397)
215 1thf_D HISF protein; thermophI 93.2 0.15 5.3E-06 55.9 7.9 75 537-628 154-229 (253)
216 3s1x_A Probable transaldolase; 92.6 1.1 3.7E-05 49.3 13.4 101 505-620 64-185 (223)
217 3l0g_A Nicotinate-nucleotide p 92.5 0.35 1.2E-05 55.3 9.6 87 510-624 194-280 (300)
218 1jvn_A Glutamine, bifunctional 92.4 0.16 5.5E-06 62.9 7.4 75 537-628 455-531 (555)
219 3tqv_A Nicotinate-nucleotide p 92.3 0.38 1.3E-05 54.7 9.6 87 510-624 185-271 (287)
220 2yzr_A Pyridoxal biosynthesis 92.3 0.35 1.2E-05 55.9 9.3 35 594-628 240-276 (330)
221 1thf_D HISF protein; thermophI 92.3 0.35 1.2E-05 53.1 9.1 78 535-628 31-108 (253)
222 1qap_A Quinolinic acid phospho 92.2 0.37 1.3E-05 55.2 9.5 87 510-624 195-281 (296)
223 1n7k_A Deoxyribose-phosphate a 92.2 0.27 9.3E-06 54.4 8.1 81 527-624 135-222 (234)
224 3inp_A D-ribulose-phosphate 3- 92.1 0.56 1.9E-05 52.3 10.5 112 512-627 75-227 (246)
225 1qop_A Tryptophan synthase alp 92.1 0.59 2E-05 52.4 10.8 108 508-630 134-241 (268)
226 1ka9_F Imidazole glycerol phos 92.0 0.25 8.4E-06 54.3 7.5 76 537-628 155-230 (252)
227 1wa3_A 2-keto-3-deoxy-6-phosph 92.0 0.26 9E-06 52.4 7.5 33 594-627 150-182 (205)
228 3paj_A Nicotinate-nucleotide p 91.7 0.64 2.2E-05 53.6 10.6 88 510-625 218-305 (320)
229 1ujp_A Tryptophan synthase alp 91.7 0.22 7.5E-06 56.3 6.7 119 506-630 75-236 (271)
230 1ka9_F Imidazole glycerol phos 91.7 0.12 4.1E-06 56.8 4.6 77 536-628 33-109 (252)
231 3gnn_A Nicotinate-nucleotide p 91.5 0.54 1.9E-05 53.7 9.7 88 510-625 196-283 (298)
232 2b7n_A Probable nicotinate-nuc 91.4 0.4 1.4E-05 54.2 8.5 91 510-625 168-259 (273)
233 4eiv_A Deoxyribose-phosphate a 91.4 0.57 1.9E-05 53.3 9.5 97 507-614 134-252 (297)
234 2y88_A Phosphoribosyl isomeras 91.3 0.18 6.1E-06 55.1 5.4 76 535-627 32-107 (244)
235 3tdn_A FLR symmetric alpha-bet 90.8 0.045 1.5E-06 60.4 0.0 74 539-628 161-234 (247)
236 1vzw_A Phosphoribosyl isomeras 90.3 0.24 8.3E-06 54.2 5.3 76 535-627 33-108 (244)
237 3khj_A Inosine-5-monophosphate 89.9 0.83 2.8E-05 53.6 9.7 96 505-623 78-173 (361)
238 4a3u_A NCR, NADH\:flavin oxido 89.8 0.55 1.9E-05 54.9 8.1 119 494-628 181-320 (358)
239 3r8r_A Transaldolase; pentose 89.7 2.8 9.5E-05 45.8 12.9 67 541-620 117-183 (212)
240 4a9w_A Monooxygenase; baeyer-v 89.7 0.61 2.1E-05 52.3 8.1 92 1243-1339 5-131 (357)
241 3o07_A Pyridoxine biosynthesis 89.6 1.2 4E-05 50.4 10.1 35 594-628 198-234 (291)
242 2qr6_A IMP dehydrogenase/GMP r 89.6 0.91 3.1E-05 53.6 9.8 99 506-624 140-240 (393)
243 1qo2_A Molecule: N-((5-phospho 89.5 0.14 4.9E-06 56.0 2.7 77 535-628 31-107 (241)
244 2jbm_A Nicotinate-nucleotide p 89.4 0.7 2.4E-05 52.9 8.3 90 511-625 184-274 (299)
245 2w6r_A Imidazole glycerol phos 89.0 0.31 1.1E-05 54.0 4.9 76 536-627 32-107 (266)
246 3ajx_A 3-hexulose-6-phosphate 88.9 1 3.4E-05 47.9 8.7 100 508-627 90-190 (207)
247 3nlc_A Uncharacterized protein 88.7 0.88 3E-05 56.2 9.2 71 1282-1356 221-294 (549)
248 1fl2_A Alkyl hydroperoxide red 88.6 0.68 2.3E-05 51.4 7.4 96 1243-1340 3-115 (310)
249 2bry_A NEDD9 interacting prote 88.2 0.57 2E-05 56.8 6.9 103 1240-1342 91-232 (497)
250 3itj_A Thioredoxin reductase 1 88.0 0.57 1.9E-05 52.3 6.3 96 1241-1340 22-142 (338)
251 2tps_A Protein (thiamin phosph 87.9 0.93 3.2E-05 48.8 7.7 33 594-627 172-204 (227)
252 2agk_A 1-(5-phosphoribosyl)-5- 87.9 1 3.5E-05 50.4 8.2 107 507-626 115-239 (260)
253 1x1o_A Nicotinate-nucleotide p 87.9 1.9 6.5E-05 49.1 10.4 86 511-624 183-269 (286)
254 1qpo_A Quinolinate acid phosph 87.7 1.8 6.2E-05 49.2 10.1 90 510-624 181-270 (284)
255 3c2e_A Nicotinate-nucleotide p 87.4 0.3 1E-05 55.8 3.6 92 510-625 185-279 (294)
256 1h5y_A HISF; histidine biosynt 87.3 1.1 3.8E-05 48.4 8.0 76 536-627 35-110 (253)
257 1vpx_A Protein (transaldolase 87.1 7.4 0.00025 43.0 14.2 65 543-620 130-194 (230)
258 1l6w_A Fructose-6-phosphate al 87.1 6.1 0.00021 43.3 13.5 101 505-620 63-184 (220)
259 3vk5_A MOEO5; TIM barrel, tran 87.1 0.95 3.2E-05 51.3 7.3 68 540-626 192-259 (286)
260 3gyx_A Adenylylsulfate reducta 87.1 0.33 1.1E-05 61.3 4.0 43 1365-1407 447-491 (662)
261 4fo4_A Inosine 5'-monophosphat 87.0 1.6 5.6E-05 51.2 9.6 99 505-623 79-177 (366)
262 1xi3_A Thiamine phosphate pyro 86.8 0.64 2.2E-05 49.5 5.6 72 540-627 121-194 (215)
263 1o4u_A Type II quinolic acid p 86.6 0.72 2.5E-05 52.5 6.1 91 510-625 179-270 (285)
264 3ovp_A Ribulose-phosphate 3-ep 86.3 3.2 0.00011 45.5 10.9 109 513-626 53-200 (228)
265 3o63_A Probable thiamine-phosp 85.7 1.6 5.6E-05 48.4 8.2 89 523-628 135-224 (243)
266 3lzw_A Ferredoxin--NADP reduct 85.6 1.2 4E-05 49.6 7.1 92 1242-1338 8-121 (332)
267 1vdc_A NTR, NADPH dependent th 85.5 1 3.5E-05 50.5 6.6 92 1242-1340 9-124 (333)
268 3glc_A Aldolase LSRF; TIM barr 84.9 3.8 0.00013 46.8 11.0 95 506-628 156-262 (295)
269 3nlc_A Uncharacterized protein 84.8 0.33 1.1E-05 60.0 2.3 48 1359-1407 497-545 (549)
270 1kf6_A Fumarate reductase flav 84.7 0.65 2.2E-05 57.9 4.9 49 1357-1406 360-417 (602)
271 2i1o_A Nicotinate phosphoribos 84.6 4.6 0.00016 48.0 11.9 102 511-627 197-302 (398)
272 1hyu_A AHPF, alkyl hydroperoxi 84.5 1.5 5E-05 53.6 7.8 98 1241-1340 212-326 (521)
273 3r9u_A Thioredoxin reductase; 84.4 1.5 5.3E-05 48.2 7.3 95 1241-1340 4-118 (315)
274 2gv8_A Monooxygenase; FMO, FAD 84.1 2.1 7.2E-05 50.8 8.8 27 1241-1267 6-34 (447)
275 3h8l_A NADH oxidase; membrane 83.9 0.66 2.3E-05 54.2 4.3 96 1242-1341 2-114 (409)
276 3v76_A Flavoprotein; structura 83.9 1.9 6.5E-05 51.2 8.3 66 1282-1353 133-208 (417)
277 2q0l_A TRXR, thioredoxin reduc 83.8 1.8 6.3E-05 47.9 7.7 92 1243-1340 3-114 (311)
278 2xve_A Flavin-containing monoo 83.8 2.7 9.3E-05 50.4 9.6 97 1242-1339 3-167 (464)
279 1i4n_A Indole-3-glycerol phosp 83.7 1.5 5.1E-05 49.0 6.8 100 506-628 135-235 (251)
280 3fbs_A Oxidoreductase; structu 83.5 1.6 5.5E-05 47.6 7.0 94 1242-1340 3-112 (297)
281 1h1y_A D-ribulose-5-phosphate 83.5 4.3 0.00015 44.1 10.2 101 511-627 103-205 (228)
282 3nix_A Flavoprotein/dehydrogen 83.1 1.6 5.6E-05 50.7 7.2 56 1282-1339 107-165 (421)
283 3f8d_A Thioredoxin reductase ( 83.1 2.1 7.3E-05 47.2 7.8 92 1242-1340 16-125 (323)
284 4gbu_A NADPH dehydrogenase 1; 83.0 2.5 8.5E-05 50.2 8.7 124 494-628 201-353 (400)
285 1w8s_A FBP aldolase, fructose- 82.9 4.5 0.00015 45.3 10.3 65 540-627 165-235 (263)
286 4a29_A Engineered retro-aldol 82.9 5.2 0.00018 44.8 10.6 103 504-628 136-238 (258)
287 2a87_A TRXR, TR, thioredoxin r 82.8 2.2 7.6E-05 48.1 7.9 93 1242-1340 15-126 (335)
288 4ap3_A Steroid monooxygenase; 82.8 3.6 0.00012 50.6 10.4 93 1242-1337 22-156 (549)
289 2p10_A MLL9387 protein; putati 82.6 2.7 9.3E-05 47.6 8.3 105 506-625 148-261 (286)
290 3jr2_A Hexulose-6-phosphate sy 82.6 1.2 4.1E-05 48.2 5.3 102 507-627 95-198 (218)
291 1trb_A Thioredoxin reductase; 82.6 2.4 8.3E-05 47.0 8.0 92 1242-1340 6-116 (320)
292 1tqj_A Ribulose-phosphate 3-ep 82.6 1.8 6.2E-05 47.4 6.8 105 510-627 101-205 (230)
293 3s5w_A L-ornithine 5-monooxyge 81.9 1.6 5.3E-05 51.8 6.5 60 1282-1341 128-193 (463)
294 3d1c_A Flavin-containing putat 81.4 2.7 9.3E-05 47.6 8.0 92 1242-1339 5-142 (369)
295 1rpx_A Protein (ribulose-phosp 81.1 3.2 0.00011 44.9 8.1 104 510-627 107-211 (230)
296 3vzx_A Heptaprenylglyceryl pho 80.8 5.8 0.0002 43.7 10.0 67 540-627 146-212 (228)
297 3kts_A Glycerol uptake operon 79.9 0.89 3.1E-05 48.9 3.1 45 577-628 140-184 (192)
298 2fli_A Ribulose-phosphate 3-ep 79.6 4.6 0.00016 43.1 8.6 105 511-628 99-203 (220)
299 3uox_A Otemo; baeyer-villiger 79.5 2.7 9.2E-05 51.7 7.6 94 1242-1338 10-145 (545)
300 3gwf_A Cyclohexanone monooxyge 79.4 2.6 9.1E-05 51.7 7.5 94 1242-1338 9-145 (540)
301 2h6r_A Triosephosphate isomera 78.4 2.9 9.9E-05 45.5 6.6 107 507-628 97-204 (219)
302 3r2g_A Inosine 5'-monophosphat 78.2 4.2 0.00014 47.7 8.3 95 505-623 75-169 (361)
303 3cwo_X Beta/alpha-barrel prote 78.2 4.1 0.00014 42.9 7.7 73 537-627 133-207 (237)
304 2v82_A 2-dehydro-3-deoxy-6-pho 78.1 4.8 0.00016 42.9 8.2 33 594-627 148-180 (212)
305 2x3n_A Probable FAD-dependent 78.1 4.8 0.00016 46.5 8.8 54 1282-1340 108-166 (399)
306 4fk1_A Putative thioredoxin re 77.8 3.5 0.00012 46.0 7.2 94 1243-1340 8-117 (304)
307 1chu_A Protein (L-aspartate ox 77.5 1.2 4.1E-05 54.8 3.6 48 1357-1405 355-411 (540)
308 1pii_A N-(5'phosphoribosyl)ant 77.5 4.4 0.00015 48.9 8.4 101 505-628 141-241 (452)
309 3ab1_A Ferredoxin--NADP reduct 77.5 5.5 0.00019 45.3 8.9 94 1242-1339 15-130 (360)
310 3kd9_A Coenzyme A disulfide re 77.4 2.1 7.3E-05 50.7 5.7 94 1241-1340 3-114 (449)
311 1vc4_A Indole-3-glycerol phosp 77.3 3.5 0.00012 46.0 7.0 101 508-628 141-241 (254)
312 2q7v_A Thioredoxin reductase; 77.0 4.5 0.00015 45.2 7.9 97 1242-1340 9-123 (325)
313 4a5l_A Thioredoxin reductase; 77.0 3.8 0.00013 45.3 7.2 93 1243-1340 6-121 (314)
314 1wx0_A Transaldolase; structur 76.6 15 0.00052 40.2 11.7 100 505-620 70-191 (223)
315 2zbw_A Thioredoxin reductase; 76.4 4.2 0.00014 45.5 7.5 93 1242-1339 6-120 (335)
316 3cty_A Thioredoxin reductase; 76.1 4.5 0.00016 45.0 7.6 91 1242-1340 17-126 (319)
317 2bs2_A Quinol-fumarate reducta 75.6 1.6 5.4E-05 55.1 4.1 48 1357-1405 373-429 (660)
318 2gqf_A Hypothetical protein HI 75.2 5.4 0.00018 47.0 8.3 69 1282-1353 110-189 (401)
319 3alj_A 2-methyl-3-hydroxypyrid 74.2 4.1 0.00014 46.9 6.8 92 1241-1340 11-160 (379)
320 1k0i_A P-hydroxybenzoate hydro 73.6 7.3 0.00025 44.8 8.7 57 1283-1341 105-164 (394)
321 2gqf_A Hypothetical protein HI 73.5 2 6.9E-05 50.7 4.0 49 1348-1401 345-399 (401)
322 1jnr_A Adenylylsulfate reducta 73.1 2.5 8.5E-05 53.1 4.9 42 1365-1406 426-469 (643)
323 2gjc_A Thiazole biosynthetic e 73.1 6.1 0.00021 45.7 7.8 161 1242-1405 66-325 (326)
324 1w4x_A Phenylacetone monooxyge 73.0 7.7 0.00026 47.3 9.2 95 1242-1339 17-153 (542)
325 3ctl_A D-allulose-6-phosphate 72.8 7 0.00024 43.0 7.8 104 510-626 95-199 (231)
326 3fmw_A Oxygenase; mithramycin, 72.5 8.6 0.00029 47.5 9.4 105 1242-1352 50-216 (570)
327 3oc4_A Oxidoreductase, pyridin 72.4 2.4 8.3E-05 50.4 4.4 95 1242-1340 3-115 (452)
328 4e38_A Keto-hydroxyglutarate-a 72.0 8.9 0.00031 42.3 8.4 81 511-622 73-153 (232)
329 3cp8_A TRNA uridine 5-carboxym 71.4 4.1 0.00014 51.3 6.2 47 1365-1412 372-419 (641)
330 3i3l_A Alkylhalidase CMLS; fla 71.3 7 0.00024 48.6 8.3 57 1282-1340 129-188 (591)
331 1jvn_A Glutamine, bifunctional 71.2 2.1 7.2E-05 52.9 3.6 78 536-627 282-371 (555)
332 3cgv_A Geranylgeranyl reductas 70.8 7 0.00024 44.6 7.6 54 1283-1339 104-161 (397)
333 3atr_A Conserved archaeal prot 70.4 11 0.00038 44.6 9.5 96 1242-1340 7-162 (453)
334 3ihg_A RDME; flavoenzyme, anth 70.3 9.8 0.00033 46.1 9.1 57 1281-1339 120-182 (535)
335 3klj_A NAD(FAD)-dependent dehy 70.2 2.6 8.9E-05 49.3 3.9 94 1240-1340 8-116 (385)
336 3ics_A Coenzyme A-disulfide re 69.9 4 0.00014 50.3 5.6 98 1240-1340 35-152 (588)
337 3bo9_A Putative nitroalkan dio 69.8 21 0.00073 40.9 11.4 89 506-622 61-150 (326)
338 3e1t_A Halogenase; flavoprotei 69.2 7 0.00024 47.3 7.5 56 1282-1340 112-172 (512)
339 2gjl_A Hypothetical protein PA 69.2 21 0.00071 40.8 11.1 89 506-622 51-144 (328)
340 1ryi_A Glycine oxidase; flavop 68.5 8.3 0.00028 43.9 7.6 26 1242-1267 18-43 (382)
341 1qo8_A Flavocytochrome C3 fuma 67.8 2.5 8.4E-05 52.0 3.2 53 1350-1405 504-564 (566)
342 2yw3_A 4-hydroxy-2-oxoglutarat 67.7 3.2 0.00011 44.8 3.7 66 538-625 115-181 (207)
343 3sx6_A Sulfide-quinone reducta 67.3 2.8 9.7E-05 49.6 3.4 93 1242-1341 5-113 (437)
344 3ffs_A Inosine-5-monophosphate 67.0 7.1 0.00024 46.4 6.7 122 472-624 73-213 (400)
345 3tha_A Tryptophan synthase alp 66.6 20 0.00069 40.0 9.9 107 508-630 128-234 (252)
346 3iwa_A FAD-dependent pyridine 66.0 5.2 0.00018 47.7 5.4 97 1241-1340 3-125 (472)
347 1zfj_A Inosine monophosphate d 65.7 5.6 0.00019 48.1 5.7 68 537-623 235-302 (491)
348 1q6o_A Humps, 3-keto-L-gulonat 65.6 15 0.0005 39.5 8.4 101 508-627 93-195 (216)
349 1q15_A CARA; CMPR, (2S,5S)-5-c 65.6 4 0.00014 49.9 4.3 51 113-164 94-162 (503)
350 2f6u_A GGGPS, (S)-3-O-geranylg 65.2 8.4 0.00029 42.6 6.4 34 594-628 190-223 (234)
351 2vou_A 2,6-dihydroxypyridine h 65.0 8.7 0.0003 44.5 6.9 27 1241-1267 5-31 (397)
352 2i0z_A NAD(FAD)-utilizing dehy 64.9 14 0.00049 43.7 8.9 68 1282-1353 135-212 (447)
353 4gj1_A 1-(5-phosphoribosyl)-5- 64.5 4.6 0.00016 44.6 4.2 77 535-627 32-108 (243)
354 1tqx_A D-ribulose-5-phosphate 64.1 21 0.00072 39.1 9.3 101 510-627 100-205 (227)
355 3ezx_A MMCP 1, monomethylamine 64.0 12 0.00041 40.6 7.3 77 529-621 125-201 (215)
356 3lab_A Putative KDPG (2-keto-3 63.9 23 0.00078 38.8 9.4 81 510-621 51-137 (217)
357 1yvv_A Amine oxidase, flavin-c 63.8 21 0.00072 39.7 9.6 26 1242-1267 3-28 (336)
358 3ntd_A FAD-dependent pyridine 63.7 4.7 0.00016 49.1 4.5 96 1242-1340 2-117 (565)
359 4gcm_A TRXR, thioredoxin reduc 63.4 6.7 0.00023 43.6 5.3 90 1243-1340 8-116 (312)
360 4b63_A L-ornithine N5 monooxyg 63.2 12 0.0004 45.5 7.8 60 1281-1340 145-214 (501)
361 1vkf_A Glycerol uptake operon 62.9 3.4 0.00012 44.3 2.6 35 593-628 148-182 (188)
362 3usb_A Inosine-5'-monophosphat 62.7 9.4 0.00032 46.7 6.8 67 537-622 258-324 (511)
363 3ces_A MNMG, tRNA uridine 5-ca 62.5 8 0.00027 48.8 6.3 48 1365-1413 378-426 (651)
364 3f4w_A Putative hexulose 6 pho 62.4 44 0.0015 35.2 11.3 91 511-622 41-133 (211)
365 2zxi_A TRNA uridine 5-carboxym 62.2 8.4 0.00029 48.4 6.4 47 1365-1412 383-430 (637)
366 2h88_A Succinate dehydrogenase 61.9 4.2 0.00014 50.9 3.7 56 1350-1405 369-433 (621)
367 3jsk_A Cypbp37 protein; octame 61.2 28 0.00096 40.5 10.2 79 1324-1405 235-335 (344)
368 2z6i_A Trans-2-enoyl-ACP reduc 61.0 29 0.00099 39.8 10.2 89 506-622 47-136 (332)
369 1q1r_A Putidaredoxin reductase 60.4 7.8 0.00027 45.8 5.5 94 1241-1341 4-115 (431)
370 2czd_A Orotidine 5'-phosphate 60.0 17 0.00058 38.8 7.5 32 597-628 158-190 (208)
371 1w0m_A TIM, triosephosphate is 59.8 46 0.0016 36.5 11.0 106 508-628 101-207 (226)
372 3ceu_A Thiamine phosphate pyro 59.4 4 0.00014 43.8 2.5 33 594-627 144-176 (210)
373 1y0p_A Fumarate reductase flav 59.2 28 0.00096 42.7 10.3 26 1242-1267 127-152 (571)
374 1y0p_A Fumarate reductase flav 59.1 3.7 0.00013 50.4 2.5 52 1350-1404 509-568 (571)
375 2i14_A Nicotinate-nucleotide p 59.1 33 0.0011 40.7 10.4 101 511-627 194-299 (395)
376 1vhc_A Putative KHG/KDPG aldol 58.6 23 0.00077 38.8 8.3 81 511-622 56-136 (224)
377 1wbh_A KHG/KDPG aldolase; lyas 58.4 23 0.00078 38.4 8.2 81 511-622 55-135 (214)
378 2wdq_A Succinate dehydrogenase 58.0 3.6 0.00012 51.1 2.0 38 1368-1405 378-424 (588)
379 2qa2_A CABE, polyketide oxygen 57.5 26 0.00089 42.3 9.5 95 1242-1339 13-165 (499)
380 2agk_A 1-(5-phosphoribosyl)-5- 57.4 3.9 0.00013 45.8 2.0 69 535-627 39-107 (260)
381 1d4d_A Flavocytochrome C fumar 57.3 4.5 0.00015 49.9 2.8 53 1350-1404 509-569 (572)
382 1viz_A PCRB protein homolog; s 56.4 11 0.00039 41.7 5.5 34 594-628 182-215 (240)
383 2r0c_A REBC; flavin adenine di 56.0 24 0.00081 43.1 8.9 54 1282-1339 139-195 (549)
384 3ces_A MNMG, tRNA uridine 5-ca 55.6 21 0.00073 45.0 8.4 25 1243-1267 30-54 (651)
385 3jr2_A Hexulose-6-phosphate sy 55.3 62 0.0021 34.6 11.0 88 512-622 48-138 (218)
386 2qa1_A PGAE, polyketide oxygen 55.3 28 0.00097 42.0 9.3 96 1241-1339 11-164 (500)
387 3dme_A Conserved exported prot 54.2 22 0.00076 39.7 7.6 67 1282-1352 151-220 (369)
388 1nvm_A HOA, 4-hydroxy-2-oxoval 53.4 25 0.00085 40.7 8.0 60 504-563 174-237 (345)
389 1qo8_A Flavocytochrome C3 fuma 53.3 27 0.00091 42.8 8.7 57 1283-1341 252-313 (566)
390 3rp8_A Flavoprotein monooxygen 53.1 16 0.00054 42.3 6.3 27 1241-1267 23-49 (407)
391 3kp1_A D-ornithine aminomutase 53.0 60 0.0021 40.8 11.3 77 529-620 639-715 (763)
392 3fg2_P Putative rubredoxin red 52.7 9.2 0.00031 44.6 4.3 91 1242-1340 2-110 (404)
393 3lxd_A FAD-dependent pyridine 52.4 9.1 0.00031 44.7 4.2 92 1242-1340 10-119 (415)
394 1mxs_A KDPG aldolase; 2-keto-3 51.8 19 0.00064 39.4 6.3 81 511-622 65-145 (225)
395 3c96_A Flavin-containing monoo 51.7 24 0.00081 41.0 7.5 26 1242-1267 5-31 (410)
396 4eqs_A Coenzyme A disulfide re 51.7 8.9 0.00031 45.5 4.0 96 1243-1341 2-117 (437)
397 1nhp_A NADH peroxidase; oxidor 51.6 7.3 0.00025 46.1 3.2 95 1243-1340 2-115 (447)
398 1to3_A Putative aldolase YIHT; 51.2 37 0.0013 38.7 8.8 101 508-628 142-259 (304)
399 3ef6_A Toluene 1,2-dioxygenase 50.8 16 0.00056 42.7 6.0 91 1242-1340 3-111 (410)
400 3h28_A Sulfide-quinone reducta 50.6 3.5 0.00012 48.6 0.2 26 1242-1267 3-30 (430)
401 3iv3_A Tagatose 1,6-diphosphat 50.5 72 0.0025 37.0 11.1 139 507-691 146-314 (332)
402 3qja_A IGPS, indole-3-glycerol 50.4 56 0.0019 36.7 10.0 85 513-623 104-189 (272)
403 3ble_A Citramalate synthase fr 50.4 22 0.00074 41.1 6.8 59 504-562 194-255 (337)
404 4avf_A Inosine-5'-monophosphat 50.1 20 0.00068 43.6 6.8 69 536-623 230-298 (490)
405 3cgb_A Pyridine nucleotide-dis 49.9 14 0.00049 44.2 5.4 96 1242-1340 37-152 (480)
406 3qj4_A Renalase; FAD/NAD(P)-bi 49.8 17 0.00057 41.0 5.7 90 1243-1337 3-162 (342)
407 1xhc_A NADH oxidase /nitrite r 49.3 6.1 0.00021 45.8 2.0 92 1240-1340 7-113 (367)
408 4gj1_A 1-(5-phosphoribosyl)-5- 49.0 42 0.0014 36.9 8.6 73 537-627 154-228 (243)
409 3urh_A Dihydrolipoyl dehydroge 49.0 18 0.00061 43.4 6.0 26 1242-1267 26-51 (491)
410 2yxb_A Coenzyme B12-dependent 48.6 49 0.0017 34.1 8.5 71 533-620 55-125 (161)
411 3dxi_A Putative aldolase; TIM 48.1 39 0.0013 38.9 8.4 58 504-562 168-228 (320)
412 2dkh_A 3-hydroxybenzoate hydro 47.7 36 0.0012 42.5 8.7 58 1282-1339 142-210 (639)
413 2xdo_A TETX2 protein; tetracyc 47.7 18 0.00061 41.9 5.6 27 1241-1267 26-52 (398)
414 3g5s_A Methylenetetrahydrofola 47.6 14 0.00049 44.2 4.7 48 1365-1413 322-370 (443)
415 3hyw_A Sulfide-quinone reducta 47.6 11 0.00037 44.5 3.8 25 1242-1266 3-27 (430)
416 2zxi_A TRNA uridine 5-carboxym 47.1 33 0.0011 43.1 8.2 26 1242-1267 28-53 (637)
417 4af0_A Inosine-5'-monophosphat 46.5 21 0.00073 43.9 6.1 67 539-624 285-351 (556)
418 2gmh_A Electron transfer flavo 46.3 33 0.0011 42.3 8.0 57 1282-1340 145-217 (584)
419 3cp8_A TRNA uridine 5-carboxym 45.5 35 0.0012 42.9 8.1 26 1242-1267 22-47 (641)
420 4g6h_A Rotenone-insensitive NA 45.5 18 0.0006 44.0 5.3 27 1241-1267 42-68 (502)
421 3bw2_A 2-nitropropane dioxygen 45.0 95 0.0033 36.0 11.2 124 472-622 43-171 (369)
422 3l8k_A Dihydrolipoyl dehydroge 44.8 32 0.0011 40.9 7.3 25 1243-1267 6-30 (466)
423 2i0z_A NAD(FAD)-utilizing dehy 44.5 13 0.00043 44.2 3.7 38 1368-1405 402-444 (447)
424 3tsm_A IGPS, indole-3-glycerol 44.5 5.6 0.00019 44.9 0.7 73 533-624 78-150 (272)
425 3cu2_A Ribulose-5-phosphate 3- 44.4 12 0.0004 41.5 3.1 106 510-627 106-221 (237)
426 1hg3_A Triosephosphate isomera 44.4 84 0.0029 34.4 9.9 106 508-628 104-210 (225)
427 2bc0_A NADH oxidase; flavoprot 44.2 9.8 0.00034 45.7 2.8 95 1242-1340 36-149 (490)
428 3q58_A N-acetylmannosamine-6-p 44.2 42 0.0014 36.7 7.5 87 514-622 61-155 (229)
429 1ypf_A GMP reductase; GUAC, pu 43.2 33 0.0011 39.5 6.8 93 510-623 83-177 (336)
430 2cdu_A NADPH oxidase; flavoenz 43.1 11 0.00039 44.5 3.0 95 1243-1340 2-117 (452)
431 3c4n_A Uncharacterized protein 42.2 22 0.00075 41.4 5.3 26 1242-1267 37-64 (405)
432 2qae_A Lipoamide, dihydrolipoy 41.9 33 0.0011 40.7 6.8 25 1243-1267 4-28 (468)
433 1eep_A Inosine 5'-monophosphat 41.5 98 0.0034 36.4 10.7 81 524-623 142-222 (404)
434 4fxs_A Inosine-5'-monophosphat 41.5 28 0.00095 42.4 6.1 69 536-623 232-300 (496)
435 1ccw_A Protein (glutamate muta 40.8 48 0.0016 33.2 6.8 74 532-621 39-117 (137)
436 1xrs_B D-lysine 5,6-aminomutas 40.8 62 0.0021 36.3 8.3 78 529-621 162-239 (262)
437 2r8w_A AGR_C_1641P; APC7498, d 40.7 67 0.0023 37.0 8.9 70 543-624 64-137 (332)
438 1ebd_A E3BD, dihydrolipoamide 40.6 35 0.0012 40.4 6.7 26 1242-1267 4-29 (455)
439 3ajx_A 3-hexulose-6-phosphate 40.2 1.1E+02 0.0037 32.1 9.8 89 512-623 42-134 (207)
440 4at0_A 3-ketosteroid-delta4-5a 39.9 16 0.00053 44.2 3.6 50 1350-1402 451-508 (510)
441 2xij_A Methylmalonyl-COA mutas 39.8 94 0.0032 39.9 10.6 89 513-620 623-711 (762)
442 3igs_A N-acetylmannosamine-6-p 39.7 57 0.0019 35.7 7.7 88 513-622 60-155 (232)
443 2yw3_A 4-hydroxy-2-oxoglutarat 39.7 83 0.0028 33.7 8.9 79 511-622 52-130 (207)
444 2a8x_A Dihydrolipoyl dehydroge 39.6 43 0.0015 39.6 7.3 25 1243-1267 5-29 (464)
445 1zk7_A HGII, reductase, mercur 39.3 48 0.0016 39.3 7.7 27 1241-1267 4-30 (467)
446 1vc4_A Indole-3-glycerol phosp 39.3 60 0.002 36.0 7.9 73 536-627 67-139 (254)
447 1y80_A Predicted cobalamin bin 39.2 60 0.002 34.5 7.7 80 523-621 116-195 (210)
448 2wkj_A N-acetylneuraminate lya 38.8 1E+02 0.0034 35.0 9.9 90 543-674 41-134 (303)
449 3l21_A DHDPS, dihydrodipicolin 38.2 81 0.0028 35.8 9.0 69 543-624 45-118 (304)
450 1req_A Methylmalonyl-COA mutas 37.6 87 0.003 40.0 9.8 75 530-621 630-704 (727)
451 4hb9_A Similarities with proba 37.2 31 0.0011 39.2 5.4 25 1243-1267 3-27 (412)
452 3nl6_A Thiamine biosynthetic b 37.0 72 0.0025 39.3 8.8 94 522-627 107-213 (540)
453 3flu_A DHDPS, dihydrodipicolin 36.4 98 0.0034 34.9 9.3 69 543-624 37-110 (297)
454 1dxl_A Dihydrolipoamide dehydr 36.4 25 0.00085 41.7 4.5 26 1242-1267 7-32 (470)
455 4dgk_A Phytoene dehydrogenase; 36.3 23 0.00078 42.1 4.2 44 1366-1409 453-496 (501)
456 2f7f_A Nicotinate phosphoribos 36.3 1.2E+02 0.0042 36.9 10.5 96 510-627 214-320 (494)
457 3eeg_A 2-isopropylmalate synth 36.2 67 0.0023 37.0 7.9 60 503-562 175-240 (325)
458 3vav_A 3-methyl-2-oxobutanoate 36.0 2E+02 0.0069 32.4 11.5 111 496-621 7-124 (275)
459 3dgz_A Thioredoxin reductase 2 35.7 31 0.0011 41.2 5.3 25 1243-1267 8-32 (488)
460 2ehh_A DHDPS, dihydrodipicolin 35.7 1.1E+02 0.0036 34.6 9.4 73 540-624 27-103 (294)
461 2ftp_A Hydroxymethylglutaryl-C 35.7 41 0.0014 38.1 6.0 58 501-558 181-241 (302)
462 3cpr_A Dihydrodipicolinate syn 35.6 1.2E+02 0.0041 34.4 9.9 69 543-624 46-119 (304)
463 2yxg_A DHDPS, dihydrodipicolin 35.5 1.2E+02 0.004 34.1 9.7 73 540-624 27-103 (289)
464 3v76_A Flavoprotein; structura 35.5 17 0.00059 43.0 3.0 39 1361-1399 372-416 (417)
465 3daq_A DHDPS, dihydrodipicolin 34.9 87 0.003 35.3 8.5 93 541-675 30-126 (292)
466 3bg3_A Pyruvate carboxylase, m 34.7 53 0.0018 41.9 7.3 60 504-563 286-348 (718)
467 1xky_A Dihydrodipicolinate syn 34.6 1E+02 0.0035 34.9 9.1 71 543-625 42-116 (301)
468 3tak_A DHDPS, dihydrodipicolin 34.4 96 0.0033 34.9 8.7 69 543-624 31-104 (291)
469 3vrd_B FCCB subunit, flavocyto 33.9 47 0.0016 38.2 6.3 25 1241-1265 2-26 (401)
470 1xdi_A RV3303C-LPDA; reductase 33.8 36 0.0012 40.8 5.4 25 1243-1267 4-31 (499)
471 4dgk_A Phytoene dehydrogenase; 33.8 45 0.0015 39.5 6.2 54 1282-1339 222-277 (501)
472 3m5v_A DHDPS, dihydrodipicolin 33.7 1.1E+02 0.0038 34.6 9.2 71 541-624 35-111 (301)
473 1p0k_A Isopentenyl-diphosphate 33.7 2.2E+02 0.0074 32.7 11.7 94 517-623 110-209 (349)
474 1zmd_A Dihydrolipoyl dehydroge 33.6 55 0.0019 38.8 7.0 26 1242-1267 7-32 (474)
475 2ztj_A Homocitrate synthase; ( 33.6 47 0.0016 39.1 6.2 60 504-563 169-232 (382)
476 1f6k_A N-acetylneuraminate lya 33.5 1.1E+02 0.0037 34.5 9.0 69 543-624 33-107 (293)
477 3b4u_A Dihydrodipicolinate syn 33.5 1.1E+02 0.0039 34.3 9.2 71 543-625 33-107 (294)
478 1v5x_A PRA isomerase, phosphor 33.4 30 0.001 37.3 4.1 81 548-674 118-198 (203)
479 3hjz_A Transaldolase B; parach 33.2 67 0.0023 37.3 7.2 50 574-628 205-254 (334)
480 2gqw_A Ferredoxin reductase; f 33.1 36 0.0012 39.7 5.1 26 1241-1266 7-32 (408)
481 3si9_A DHDPS, dihydrodipicolin 32.5 87 0.003 35.8 8.0 69 543-624 52-125 (315)
482 2cw6_A Hydroxymethylglutaryl-C 32.5 73 0.0025 35.9 7.4 51 504-554 181-232 (298)
483 3ewb_X 2-isopropylmalate synth 32.4 85 0.0029 35.5 7.9 59 504-562 175-239 (293)
484 3w01_A Heptaprenylglyceryl pho 32.3 22 0.00074 39.4 2.8 34 594-628 186-219 (235)
485 2gag_A Heterotetrameric sarcos 32.0 66 0.0022 42.3 7.8 95 1242-1340 129-253 (965)
486 3qze_A DHDPS, dihydrodipicolin 32.0 83 0.0029 35.9 7.8 70 542-624 52-126 (314)
487 1jcn_A Inosine monophosphate d 31.9 91 0.0031 37.9 8.6 68 536-622 256-323 (514)
488 1i4n_A Indole-3-glycerol phosp 31.9 1.2E+02 0.004 33.8 8.7 89 506-624 89-179 (251)
489 2v9d_A YAGE; dihydrodipicolini 31.6 1E+02 0.0035 35.6 8.6 72 541-625 59-135 (343)
490 4adt_A Pyridoxine biosynthetic 31.2 1E+02 0.0034 35.2 8.2 87 506-623 66-152 (297)
491 1y56_A Hypothetical protein PH 30.8 28 0.00097 41.8 3.8 96 1241-1340 108-219 (493)
492 1xg4_A Probable methylisocitra 30.5 3.6E+02 0.012 30.6 12.6 159 436-675 81-256 (295)
493 3lad_A Dihydrolipoamide dehydr 30.4 34 0.0012 40.7 4.3 25 1243-1267 5-29 (476)
494 3iwp_A Copper homeostasis prot 30.3 1.6E+02 0.0055 33.4 9.5 146 455-624 60-239 (287)
495 3ih1_A Methylisocitrate lyase; 30.0 2.6E+02 0.009 31.9 11.3 103 504-630 140-250 (305)
496 3rmj_A 2-isopropylmalate synth 29.9 90 0.0031 36.6 7.7 59 504-562 182-246 (370)
497 1v59_A Dihydrolipoamide dehydr 29.8 32 0.0011 40.8 4.0 26 1242-1267 6-31 (478)
498 3na8_A Putative dihydrodipicol 29.4 84 0.0029 35.9 7.2 70 542-624 53-127 (315)
499 1pii_A N-(5'phosphoribosyl)ant 29.2 1.7E+02 0.0057 35.4 10.0 100 494-624 82-185 (452)
500 3e96_A Dihydrodipicolinate syn 29.1 75 0.0026 36.3 6.8 90 543-675 42-135 (316)
No 1
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=100.00 E-value=1.4e-230 Score=2201.19 Aligned_cols=976 Identities=46% Similarity=0.758 Sum_probs=919.5
Q ss_pred hHHHHHhhccCCCCCCCCCC--CCcccccccccccchHhHHHHHHhhhcccCCCCCCC-ccceeeccCCCCCchHHHHH-
Q psy12805 10 EEEFRLLAEKCQLEVLGQHE--NTRKCVAHNGEINTVRGNVNFMKAREGVMKSPHIPD-IKQLYPVVEPNLSDSGAADC- 85 (1429)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~--~~~r~~~hngeint~~gn~~~~~ar~~~~~~~~~~~-~~~~~p~~~~~~sds~~~d~- 85 (1429)
+..+++.|.||||||.+||+ +|||+|||||||||+++|||||+|||..++|++|++ ++++.||+..++|||+.|||
T Consensus 201 ~g~~aigH~RySTnt~p~w~~AQPf~~laHNGeInn~~~nr~~m~are~~~~~~~~G~~l~~~~pii~~~~SDSevld~~ 280 (1479)
T 1ea0_A 201 ESDFAIYHQRYSTNTFPTWPLAQPFRMLAHNGEINTVKGNVNWMKAHETRMEHPAFGTHMQDLKPVIGVGLSDSGSLDTV 280 (1479)
T ss_dssp CBSEEEEEECCCSCSCCCSTTSSCCSSEEEEECCTTHHHHHHHHHHHGGGCCCSTTGGGHHHHCCSSCTTCCHHHHHHHH
T ss_pred ceeEEEeeecccCCCCCCcccCCccEEEEECChhhCHHHHHHHHHHhHhhhcCchhhhhHHhcCCcCCCCCCcHHHHHHH
Confidence 45689999999999999999 999999999999999999999999999999999996 99999999999999999999
Q ss_pred -------------HHHhhCccccccCCCCCHHHHHHHHHHhhccCCCCcceEEEEEcCCeEEEecccCCCCCCcEEEEeC
Q psy12805 86 -------------AVMTMVPEAWQNDGTMPDEKRDFYNWAACAMEPWDGPALLTFTDGRYIGAILDRNGLRPSRFYVLKD 152 (1429)
Q Consensus 86 -------------a~~~~~p~a~~~~~~~~~~~~~~y~~~~~~~epwdgpa~~~~~dg~~~ga~ldrnglrp~r~~~~~d 152 (1429)
|+||||||||++++.|+|++|+||+|++++||||||||+|+|+||++++|++|||||||+||.+|+|
T Consensus 281 lelL~~~g~~l~~A~~~liPeaw~~~~~m~~~~~~fye~~~~~me~~dGp~slv~~dg~~l~a~~DrnGlRPl~~g~t~d 360 (1479)
T 1ea0_A 281 FEVMVRAGRTAPMVKMMLVPQALTSSQTTPDNHKALIQYCNSVMEPWDGPAALAMTDGRWVVGGMDRNGLRPMRYTITTD 360 (1479)
T ss_dssp HHHHHHTTCCHHHHHHHHSCCCCC---CCCHHHHHHHHHHHHHCCCCCSSEEEEECSSSEEEEECCTTCCSCCEEEEETT
T ss_pred HHHHHHcCCCHHHHHHHhCchhhcccccCCHHHHHHHHHHHHhhccCCCcEEEEEEeCCEEEEEecCCCCcceEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeeccccccCCCCcccc----------------------------------------------------------
Q psy12805 153 NVMVMASEVGVYDTDPANVQLK---------------------------------------------------------- 174 (1429)
Q Consensus 153 ~~~~~~se~g~~~~~~~~v~~~---------------------------------------------------------- 174 (1429)
+.+|+|||+|++|++++++++|
T Consensus 361 ~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id~~~g~i~~~~eik~~~~~~~py~~wl~~~~~l~~~~~~~~~~~~~~ 440 (1479)
T 1ea0_A 361 GLIIGGSETGMVKIDETQVIEKGRLGPGEMIAVDLQSGKLYRDRELKDHLATLKPWDKWVQNTTHLDELVKTASLKGEPS 440 (1479)
T ss_dssp SEEEECSSSTTSCCCGGGEEEEEECCTTCEEEEETTTTEEECHHHHHHHHHHTTTHHHHHTTCBCTTHHHHHHHHTTCCC
T ss_pred CEEEEEcccccccCcchheeeccCCCCCeEEEEECCCCeEeccHHHHHHHHhhCCchhHHhcceeHhhcccccccccccc
Confidence 9999999999999999998884
Q ss_pred -------------------------CCC-------------chhhhHH----------------------h---------
Q psy12805 175 -------------------------IPM-------------DASLKCL----------------------I--------- 185 (1429)
Q Consensus 175 -------------------------~~m-------------d~pla~l----------------------i--------- 185 (1429)
.|| ||||||| |
T Consensus 441 ~~~~~~~~~~~~~fgyt~e~~~~~l~pma~~g~e~~gsMG~D~pla~ls~~~~~l~~yFkq~fAqVTNPpiD~iRE~~v~ 520 (1479)
T 1ea0_A 441 DMDKAELRRRQQAFGLTMEDMELILHPMVEDGKEAIGSMGDDSPIAVLSDKYRGLHHFFRQNFSQVTNPPIDSLRERRVM 520 (1479)
T ss_dssp CCCTHHHHHHHHTTTCCHHHHHTTTHHHHHHSSCCEECSCCCSCCGGGCSSCCCGGGTEEECCCCSSSCCCCTTTTGGGC
T ss_pred CCCHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCcCcccCCCCchhhhhcCCCcchHHHHHHHhhhccCCCccchhhhcee
Confidence 122 9999999 0
Q ss_pred --------------------------------------------------------------------------------
Q psy12805 186 -------------------------------------------------------------------------------- 185 (1429)
Q Consensus 186 -------------------------------------------------------------------------------- 185 (1429)
T Consensus 521 sl~~~~G~~~n~l~~~~~~~~~~~l~~Pil~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~l~~al~~l~~~a~~av~~g 600 (1479)
T 1ea0_A 521 SLKTRLGNLGNILDEDETQTRLLQLESPVLTTAEFRAMRDYMGDTAAEIDATFPVDGGPEALRDALRRIRQETEDAVRGG 600 (1479)
T ss_dssp CCCEEESCCSCTTCCSGGGSCSEEESCSBCCHHHHHHHHHHHGGGEEEEECEEESTTCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred eccccccCCcccCCCCccCCCEEEeCCCcCCHHHHHHHhccCCCceEEEEEEEECCCChhHHHHHHHHHHHHHHHHHHCC
Confidence
Q ss_pred -------------------------hhc---------------------cchhHHHHHhhccccccchHhHHHHHHHHHh
Q psy12805 186 -------------------------LVH---------------------REVHHMCVLLGYGADAICPYLVFEMAKSLRA 219 (1429)
Q Consensus 186 -------------------------~vh---------------------r~~h~~~~l~g~ga~av~pyl~~~~~~~~~~ 219 (1429)
||| ||+|||||||||||+|||||||||++.+|.+
T Consensus 601 ~~iliLsDr~~~~~~~~ip~lla~~avh~~L~~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av~Pyla~e~~~~~~~ 680 (1479)
T 1ea0_A 601 ATHVILTDEAMGPARAAIPAILATGAVHTHLIRSNLRTFTSLNVRTAEGLDTHYFAVLIGVGATTVNAYLAQEAIAERHR 680 (1479)
T ss_dssp CCEEEEECTTCBTTEEECCHHHHHHHHHHHHHTTTCGGGCEEEEECSSCCSHHHHHHHHTTTCSEEECHHHHHHHHHHHT
T ss_pred CcEEEECCCCCCCCccCcCHHHHHHHHHHHHHhcCccccceEEEEeCCchhHHHHHHHHhcCccccCHHHHHHHHHHHHH
Confidence 677 9999999999999999999999999999976
Q ss_pred cC------------CHHHHHhhhHHhHhhcccccccccCCCccceeecCCCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q psy12805 220 EG------------NYCDAMERGISKVMAKMGISTLQSYKGAQIFEAVGLAEEVINKCFKGTPSRLGGITFEVLAQEAYD 287 (1429)
Q Consensus 220 ~~------------~~~~a~~~g~~kvmskmgis~~~sy~gaq~fe~~gl~~~~~~~~f~gt~s~~~g~~~~~~~~~~~~ 287 (1429)
+| ||++|++|||+|||||||||||+|||||||||||||++||||+||+||+|||+|++|++|++|++.
T Consensus 681 ~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiFeavGl~~~~v~~~F~gt~s~i~G~~~~~i~~~~~~ 760 (1479)
T 1ea0_A 681 RGLFGSMPLEKGMANYKKAIDDGLLKIMSKMGISVISSYRGGGNFEAIGLSRALVAEHFPAMVSRISGIGLNGIQKKVLE 760 (1479)
T ss_dssp TTTTTTCCHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHTTSCCEEESSBCHHHHHHHSSSCCCSSCCBCHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceeeeecCCCHHHHHHhcCCCCcccCCCCHHHHHHHHHH
Confidence 65 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccccccccccCCCcceeeccCCCCCCCCHHHHHHHHHHHhcCChHHHHHHHHHhhcccCccccccccccccCCC
Q psy12805 288 RHFLSYSERTADMLVLRNPGYYHWRAGGEKHINDPVSIANLQEAASNNNKNAYDRFRESNMESVKYSTLRGQLDFVTHDK 367 (1429)
Q Consensus 288 ~~~~~~~~~~~~~~~l~~~g~~~~r~~ge~h~~~p~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~~ 367 (1429)
||+.||+.+ ...|+.+|+||||++||+|.|+|++|+.||+++++++|+.|++|.+.+++ .+++++|+++.|+.+.+
T Consensus 761 ~h~~a~~~~---~~~l~~~g~~~~r~~ge~h~~~p~~i~~l~~~~~~g~~~~~~~~~~~~~~-~~~~~~~dl~~~~~~l~ 836 (1479)
T 1ea0_A 761 QHATAYNEE---VVALPVGGFYRFRKSGDRHGWEGGVIHTLQQAVTNDSYTTFKKYSEQVNK-RPPMQLRDLLELRSTKA 836 (1479)
T ss_dssp HHHHHHSSC---CSSCCCCCSSSCCSSSSCCSSCHHHHHHHHHHHHHTCHHHHHHHHHHHHT-SCCCSGGGGEEECCSSC
T ss_pred HHHHhcCcc---cccCCCCCeeecCCCCCccCCCHHHHHHHHHHHHhCCHHHHHHHHhhhcc-CCCCchhhhhhccCCCC
Confidence 999999765 24599999999999999999999999999999999999999999999887 57889999999998778
Q ss_pred CCCCCCCCcccccccceeeCCCCCccchHHHHHHHHHHHHHhCCcEEecCCCCCcccccc-CCCcccccceeecccCCCC
Q psy12805 368 PVDISEVEPAAEIVKRFATGAMSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLS-SGDENQRSAIKQVASGRFG 446 (1429)
Q Consensus 368 ~i~~~~v~~~~~i~~pf~i~aMS~GslS~ea~~aLA~aa~~~G~~~~tGEGg~~~~~~~~-~~~~~~~~~I~Q~asgrfG 446 (1429)
|+++++|||.++|.+||+|++||||++|+++|++||+||+++|+.+|+|||+++|+++.+ .+++...+.|+|+++++||
T Consensus 837 ~i~~~ev~~~~~I~~Pf~isaMS~GalS~ea~~aLA~Aa~~aGg~~~tGeGg~~pe~~~~~~~g~~~~~~IrQ~asg~FG 916 (1479)
T 1ea0_A 837 PVPVDEVESITAIRKRFITPGMSMGALSPEAHGTLNVAMNRIGAKSDSGEGGEDPARFRPDKNGDNWNSAIKQVASGRFG 916 (1479)
T ss_dssp CCCGGGSCCHHHHHTTEEEEECCBTTBCHHHHHHHHHHHHHTTCEEECCTTCCCGGGSSBCTTSCBCCCSEEEECSSCTT
T ss_pred CCCcccccccccccCCeEecCccccccCHHHHHHHHHHHHHcCCeeEcCCCccCHHHhhhccccchhhhhhhhhcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998742 2345577899999999999
Q ss_pred CChhhhccccchhhhcccCCCCCCCCCcccccchHHHHhccCCCCccccccCCCCCCCCCHHHHHHHHHHHHHhCCCCeE
Q psy12805 447 VTSSYLAHADDLQIKMAQGAKPGEGGELPGYKVTKDIASTRHSVPGVGLISPPPHHDIYSIEDLAELIYDLKCANPNARI 526 (1429)
Q Consensus 447 v~~~~L~~a~~ieIk~gQGAKpG~GG~lpg~KV~~~iA~~r~~~pg~~LisP~~h~di~siedL~qlI~~Lk~~~~~~pV 526 (1429)
|+.+++.+++++|||++||||||+||+||+.||+++||++||++||++++||++||||+|++++.++|++||+.+|.+||
T Consensus 917 Vn~~~l~~a~~ieIKigQGAKpG~GG~Lp~~kv~~~IA~~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV 996 (1479)
T 1ea0_A 917 VTAEYLNQCRELEIKVAQGAKPGEGGQLPGFKVTEMIARLRHSTPGVMLISPPPHHDIYSIEDLAQLIYDLKQINPDAKV 996 (1479)
T ss_dssp CCHHHHTSCSEEEEECCCTTSTTTCCEECGGGCCHHHHHHHTCCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTCEE
T ss_pred cChHHccccchHHHHHhccCCCCcCCCCCHHHHHHHHHHHcCCCCCCCccCCCCCcCcCCHHHHHHHHHHHHHhCCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccH
Q psy12805 527 SVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTG 606 (1429)
Q Consensus 527 ~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg 606 (1429)
+||+++++|++++|..++++|||+|+|+|++|||+++|+.+.+++|+||+.+|++++++|..+|+|++|+||++|||+|+
T Consensus 997 ~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrtG 1076 (1479)
T 1ea0_A 997 TVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTG 1076 (1479)
T ss_dssp EEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESSCCSH
T ss_pred EEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy12805 607 FDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIR 686 (1429)
Q Consensus 607 ~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~ 686 (1429)
.||+||++|||++|++||++|++++|+|||+||+|+||+||+||||.|+++|.+++++|.||++.+.+||+++|+.+|++
T Consensus 1077 ~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~l~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~ 1156 (1479)
T 1ea0_A 1077 RDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFLAEEVREILAGLGFR 1156 (1479)
T ss_dssp HHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTTGGGSCCCCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCceeEEeCHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhcCCCccccccC-CCCCccccCCChhHHHHhhhccCCCcccccCcccccCCccccccHHHHHHHHhhhcCCCCcEE
Q psy12805 687 KFADLVGRTDLLKPRE-VGANPKAKMLNFAFLLKNALHMRPGVNIRAGSETQDHQLEKRLDNTLIQECEPVLSGKVPRID 765 (1429)
Q Consensus 687 sl~ElvGrsdll~~~~-~~~~~k~~gldl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 765 (1429)
+++||+|+++++.... ... |+++|||+.||.++.. .++ ...+..+|+|.++..||.++++.++++++++. ++.
T Consensus 1157 si~eL~g~~~ll~~~~~~~~--k~~~ldls~~l~~~~~-~~~--~~~~~~~~~~~~~~~ld~~l~~~~~~a~~~~~-~~~ 1230 (1479)
T 1ea0_A 1157 SLNEVIGRTDLLHQVSRGAE--HLDDLDLNPRLAQVDP-GEN--ARYCTLQGRNEVPDTLDARIVADARPLFEEGE-KMQ 1230 (1479)
T ss_dssp CSGGGTTCGGGEEEC----------CCCCHHHHCCSSC-C-----------CCCCCCCCTHHHHHHHTHHHHHHCC-CEE
T ss_pred CHHHHhCchheeecccccch--hccCCChHHhcCCCCC-CCC--CccccccCCcccchHHHHHHHHHHHHHHhcCC-cEE
Confidence 9999999999998765 322 8899999999987642 111 23344567888888899999999999998765 788
Q ss_pred EEEEEeecCCcccccchhhhccccccCCCCCCcEEEEEeCCccchhhhcccCCeeEeecCCcccccCccchhhhhcccce
Q psy12805 766 LEYTINNECRAFTATLSYHISIKTKEEGLPENSINLKLTGSAGQSFCAFLVRGVHVTLEGDANDYVGKESFCAFLVRGVH 845 (1429)
Q Consensus 766 ~~~~i~n~~r~~g~~l~~~i~~~~g~~glp~~~i~i~~~g~aG~s~Ga~~~~G~~i~v~g~~~~~~g~~~~~g~~~~~~~ 845 (1429)
+++.|.|+||++|++||++|+++||..|||.++++|+++|++||||||||.+|++
T Consensus 1231 ~~~~i~n~~R~vG~~ls~~i~~~~g~~gl~~~~i~i~i~G~aGq~~Ga~m~~G~~------------------------- 1285 (1479)
T 1ea0_A 1231 LAYNARNTQRAIGTRLSSMVTRKFGMFGLQPGHITIRLRGTAGQSLGAFAVQGIK------------------------- 1285 (1479)
T ss_dssp EEEEECTTCCSTTHHHHHHHHHHTTTTSSCTTSEEEEEEEEECSSTTTTCBTTEE-------------------------
T ss_pred EEeceeecccchhhHHHHHHHHHhccCCCCCCceEEEEeCCchHHhhccCCCCCE-------------------------
Confidence 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccccccccccCCceEEEeCCCCCCCCCCccceeccccccccccCceeEecccCcceeeeecCceEEEcccCcccc
Q psy12805 846 VTLEGDANDYVGKGLSGGEIIIYPPKTSTFESDKNVIVGNVCLYGATSGKAFFRGIAAERFSVRNSGAVAVVEGVGDHGC 925 (1429)
Q Consensus 846 i~l~G~and~vgkgmsGG~ivv~p~~~~~~~~~~n~~~Gn~~~yg~tgG~~~i~g~ag~Rfgvr~sg~~~vv~G~g~~~~ 925 (1429)
|+|+|+||||+||+|+||+|+|+|+.+++|.++.|+++||+|+|||+||++||+|+||+|||+|||||++||||+|||+|
T Consensus 1286 i~v~G~A~dyvGk~m~GG~IvV~g~~~~~~~~~~~~~~Gn~~~~gm~gG~i~v~G~AG~R~gvr~sG~~iVV~G~Gd~~~ 1365 (1479)
T 1ea0_A 1286 LEVMGDANDYVGKGLSGGTIVVRPTTSSPLETNKNTIIGNTVLYGATAGKLFAAGQAGERFAVRNSGATVVVEGCGSNGC 1365 (1479)
T ss_dssp EEEEEEECSCTTTTCEEEEEEEECCTTCCCCGGGSEEECSSTTTTCCEEEEEESSEECTTTTTTCEEEEEEESCBCSSTT
T ss_pred EEEEEeCchhhcCCCcCCEEEEECCcccccccccCcchhHHHHhhccCcEEEEEeehhhhhhhhccCCEEEecCCcccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCceEEEeCCCCCcccccccccEEEEecCCCchhcccCccceEeeecCChhhHHHHHHHHHHHHHhhccHHHHHHhh
Q psy12805 926 EYMTGGCAVILGLTGRNFAAGMSGGIAYVLDVDGSFAKKCNMEMVELLPLELPEDLDYVKSLLVEFHEKTESEIAKNLLQ 1005 (1429)
Q Consensus 926 eyM~gG~ivvlG~~g~~~g~gM~gG~~yv~~~~~~f~~~~n~~~v~~~~~~~~~~~~~l~~~~~~~~~~t~s~~a~~~l~ 1005 (1429)
||||||+|||||++|+|||+||+||+|||+|++++|.+++|.++|++.+..+++|+++|++||++|+++|+|+.++.||+
T Consensus 1366 eyMtGG~ivVlG~~G~~~gagM~GG~iyv~~~~~~f~~~~n~e~V~~~~~~~~~d~~~L~~ll~~h~~~tgs~~a~~iL~ 1445 (1479)
T 1ea0_A 1366 EYMTGGTAVILGRVGDNFAAGMTGGMAYVYDLDDSLPLYINDESVIFQRIEVGHYESQLKHLIEEHVTETQSRFAAEILN 1445 (1479)
T ss_dssp TTCCEEEECCSSCBCSSBTTTCCSSEECCCCTTSCHHHHBCGGGEEEECCCSTTHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred eeccCCEEEEeCCCCCCccCCccCeEEEEeCCCCChhhhcCHhHhhhcccCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998654456789999999999999999999999999
Q ss_pred cCCCCCCCeEEEecc
Q psy12805 1006 TWPAPAKQFVKVTKD 1020 (1429)
Q Consensus 1006 ~~~~~~~~f~kV~p~ 1020 (1429)
+|+...++|+||+|.
T Consensus 1446 ~~~~~~~~F~kv~P~ 1460 (1479)
T 1ea0_A 1446 DWAREVTKFWQVVPK 1460 (1479)
T ss_dssp THHHHHTTCCEEEEG
T ss_pred hHHHHhcCeEEEech
Confidence 999999999999997
No 2
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=100.00 E-value=1.4e-228 Score=2185.97 Aligned_cols=977 Identities=46% Similarity=0.774 Sum_probs=920.3
Q ss_pred hHHHHHhhccCCCCCCCCCC--CCcccccccccccchHhHHHHHHhhhcccCCCCC-C-CccceeeccCCCCCchHHHHH
Q psy12805 10 EEEFRLLAEKCQLEVLGQHE--NTRKCVAHNGEINTVRGNVNFMKAREGVMKSPHI-P-DIKQLYPVVEPNLSDSGAADC 85 (1429)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~--~~~r~~~hngeint~~gn~~~~~ar~~~~~~~~~-~-~~~~~~p~~~~~~sds~~~d~ 85 (1429)
+..+++.|.||+|||.+||+ +|||+|||||||||+++|||||+|||..|+|++| + ++++++|++.+++|||+.|||
T Consensus 197 ~g~~aigH~RySTnt~p~w~~AQPf~~LaHNGeInt~~~nrnwm~aR~~~~~s~~~~g~~l~~~~p~i~~~~SDSe~ld~ 276 (1520)
T 1ofd_A 197 TSNFAVYHRRFSTNTMPKWPLAQPMRLLGHNGEINTLLGNINWMAAREKELEVSGWTKAELEALTPIVNQANSDSYNLDS 276 (1520)
T ss_dssp CBSEEEEEECCCSSSCCCGGGSSCCSSEEEEECCTTHHHHHHHHHHHGGGCCCTTCCHHHHHHHCCSCCTTSCHHHHHHH
T ss_pred ceeEEEEEccccCCCCCCcccCCchheeEecchhhcHHHHHHHHHHHHHHhcCcccchhhHHhhCCcCCCCCCcHHHHHH
Confidence 45689999999999999999 9999999999999999999999999999999999 5 499999999999999999997
Q ss_pred --------------HHHhhCccccccCCCCC--HHHHHHHHHHhhccCCCCcceEEEEEcCCeEEEecccCCCCCCcEEE
Q psy12805 86 --------------AVMTMVPEAWQNDGTMP--DEKRDFYNWAACAMEPWDGPALLTFTDGRYIGAILDRNGLRPSRFYV 149 (1429)
Q Consensus 86 --------------a~~~~~p~a~~~~~~~~--~~~~~~y~~~~~~~epwdgpa~~~~~dg~~~ga~ldrnglrp~r~~~ 149 (1429)
|+||||||||+|++.|+ |++|+||+|++++||||||||+|+|+||++++|+||||||||+||++
T Consensus 277 ~lelL~~~g~~l~~A~~~liPeaw~~~~~m~~~~~~~~fyey~~~~me~~dGpaalv~~dg~~l~a~~DrnGlRPl~~~~ 356 (1520)
T 1ofd_A 277 ALELLVRTGRSPLEAAMILVPEAYKNQPALKDYPEISDFHDYYSGLQEPWDGPALLVFSDGKIVGAGLDRNGLRPARYCI 356 (1520)
T ss_dssp HHHHHHHTTCCHHHHHHHHSCCCCTTCGGGTTCHHHHHHHHHHTTTCCCCCSSEEEEEECSSEEEEEECTTCCSCCEEEE
T ss_pred HHHHHHhcCCCHHHHHHHhCcchhcccccccccHHHHHHHHHHHHhcccCCCCEEEEEEeCCEEEEEecCCCCCceEEEE
Confidence 99999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred EeCCEEEEEeeccccccCCCCcccc--------------------------------------------C----------
Q psy12805 150 LKDNVMVMASEVGVYDTDPANVQLK--------------------------------------------I---------- 175 (1429)
Q Consensus 150 ~~d~~~~~~se~g~~~~~~~~v~~~--------------------------------------------~---------- 175 (1429)
|+|+.+|+|||+|++|++++++++| .
T Consensus 357 t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id~~~g~i~~~~eik~~~a~~~py~~wl~~~~~~l~~~~~~~~~~ 436 (1520)
T 1ofd_A 357 TKDDYIVLGSEAGVVDLPEVDIVEKGRLAPGQMIAVDLAEQKILKNYQIKQQAAQKYPYGEWIKIQRQTVASDSFAEKTL 436 (1520)
T ss_dssp ETTCCEEEESSTTCSCCCGGGEEEEEECCTTCEEEEETTTTEEECHHHHHHHHHTTSCHHHHHHHHEEEECCSCCCCSCS
T ss_pred eCCCEEEEEcccccccCcchheeeccCCCCCeEEEEECCCCeEechHHHHHHHHhcCCHHHHHhhhceeccccccccccc
Confidence 9999999999999999999999885 1
Q ss_pred --------------------------CC-------------chhhhHH----------------------h---------
Q psy12805 176 --------------------------PM-------------DASLKCL----------------------I--------- 185 (1429)
Q Consensus 176 --------------------------~m-------------d~pla~l----------------------i--------- 185 (1429)
|| ||||||| |
T Consensus 437 ~~~~~~~~~~q~~fgyt~e~~~~~l~pma~~g~e~~gsMG~D~plavls~~~~~l~~yFkQ~fAqVTNPpiD~iRE~~v~ 516 (1520)
T 1ofd_A 437 FNDAQTVLQQQAAFGYTAEDVEMVVVPMASQGKEPTFCMGDDTPLAVLSHKPRLLYDYFKQRFAQVTNPPIDPLRENLVM 516 (1520)
T ss_dssp CSCHHHHHHHHHHTTCCHHHHHHTHHHHHHHSSCCEECSCCCSCCTTTCSSCCCGGGGEEECCCCSSSCCCCTTTTGGGC
T ss_pred ccchHHHHHHHHHhCCCHHHHHHHHHHHHhcCCcCcccCCCCchhhhhcCCCccHHHHHHHhhhhccCCCccchhhhhee
Confidence 22 9999999 0
Q ss_pred --------------------------------------------------------------------------------
Q psy12805 186 -------------------------------------------------------------------------------- 185 (1429)
Q Consensus 186 -------------------------------------------------------------------------------- 185 (1429)
T Consensus 517 Sl~~~~G~~~n~l~~~~~~~~~~~l~~Pil~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~al~~l~~~a~~av~~g~~ 596 (1520)
T 1ofd_A 517 SLAMFLGKRGNLLEPKAESARTIKLRSPLVNEVELQAIKTGQLQVAEVSTLYDLDGVNSLEDALTNLVKTAIATVQAGAE 596 (1520)
T ss_dssp BCCEEESCCCCSSSCCGGGGCEEEESCSBCCHHHHHHHHHSSSCEEEEECEEECSSSCCHHHHHHHHHHHHHHHHHTTCS
T ss_pred eccccccCCCCCCCCCcCCCCEEEeCCCccCHHHHHHHhcCCCceEEEEEEEeCCchhHHHHHHHHHHHHHHHHHHCCCc
Confidence
Q ss_pred ---------------------------hhc---------------------cchhHHHHHhhccccccchHhHHHHHHHH
Q psy12805 186 ---------------------------LVH---------------------REVHHMCVLLGYGADAICPYLVFEMAKSL 217 (1429)
Q Consensus 186 ---------------------------~vh---------------------r~~h~~~~l~g~ga~av~pyl~~~~~~~~ 217 (1429)
||| ||+|||||||||||+|||||||||++.+|
T Consensus 597 iliLsDr~~~~~~~~~~~~ip~lla~~avh~~Li~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av~Pyla~e~~~~~ 676 (1520)
T 1ofd_A 597 ILVLTDRPNGAILTENQSFIPPLLAVGAVHHHLIRAGLRLKASLIVDTAQCWSTHHFACLVGYGASAICPYLALESVRQW 676 (1520)
T ss_dssp EEEEESSGGGCCCCTTEEECCHHHHHHHHHHHHHHTTCGGGCEEEEECSSCCSHHHHHHHHHTTCSEEECHHHHHHHHHH
T ss_pred EEEEcCCCCcCCCCCCccCcCHHHHHHHHHHHHHhcCCcccccEEEEeCCcChHHHHHHHHHcchhhhcHHHHHHHHHHH
Confidence 466 99999999999999999999999999998
Q ss_pred ---------HhcC------------CHHHHHhhhHHhHhhcccccccccCCCccceeecCCCHHHHhhcCCCCCCCCCCC
Q psy12805 218 ---------RAEG------------NYCDAMERGISKVMAKMGISTLQSYKGAQIFEAVGLAEEVINKCFKGTPSRLGGI 276 (1429)
Q Consensus 218 ---------~~~~------------~~~~a~~~g~~kvmskmgis~~~sy~gaq~fe~~gl~~~~~~~~f~gt~s~~~g~ 276 (1429)
.++| ||++|++|||+|||||||||||+||+||||||||||++||||+||+||+|||+|+
T Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiFeavGl~~~~v~~~F~gt~s~i~G~ 756 (1520)
T 1ofd_A 677 WLDEKTQKLMENGRLDRIDLPTALKNYRQSVEAGLFKILSKMGISLLASYHGAQIFEAIGLGAELVEYAFAGTTSRVGGL 756 (1520)
T ss_dssp HSCHHHHHHHTTSSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCCEEESSBCHHHHHHHSTTCCCTTCCB
T ss_pred HhcccchhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceeeeecCCCHHHHHHhCCCCCcCCCCC
Confidence 4433 9999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhccccccccccccCCCcceeeccCCCCCCCCHHHHHHHHHHHhc----------CChHHHHHHHHH
Q psy12805 277 TFEVLAQEAYDRHFLSYSERTADMLVLRNPGYYHWRAGGEKHINDPVSIANLQEAASN----------NNKNAYDRFRES 346 (1429)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~r~~ge~h~~~p~~~~~l~~a~~~----------~~~~~~~~~~~~ 346 (1429)
+|++|++|++.||+.||+.+ ...|+.+|+|+||++||+|.|+|++|+.||+++++ ++|+.|++|++.
T Consensus 757 ~~~~i~~~~~~~h~~a~~~~---~~~l~~~g~~~~r~~ge~h~~~p~~i~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 833 (1520)
T 1ofd_A 757 TIADVAGEVMVFHGMAFPEM---AKKLENFGFVNYRPGGEYHMNSPEMSKSLHKAVAAYKVGGNGNNGEAYDHYELYRQY 833 (1520)
T ss_dssp CHHHHHHHHHHHHHHHC-------CCCCCCSSSSCCTTSSCCSCCHHHHHHHHHHHHHC------------CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCcc---cCcCCCCCeeecCCCCCCCCCCHHHHHHHHHHHhcccCcccccccCCHHHHHHHHhh
Confidence 99999999999999999764 24599999999999999999999999999999999 899999999999
Q ss_pred hhcccCccccccccccccCCCCCCCCCCCcccccccceeeCCCCCccchHHHHHHHHHHHHHhCCcEEecCCCCCccccc
Q psy12805 347 NMESVKYSTLRGQLDFVTHDKPVDISEVEPAAEIVKRFATGAMSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYL 426 (1429)
Q Consensus 347 ~~~~~~~~~lr~~l~~~~~~~~i~~~~v~~~~~i~~pf~i~aMS~GslS~ea~~aLA~aa~~~G~~~~tGEGg~~~~~~~ 426 (1429)
+++ .+++++|+++.|+.+.+++++++|||..+|.+||++++||||++|+++|++||+||+++|+.+|+|||+++|+++.
T Consensus 834 ~~~-~~~~~~r~l~~~~~~~~~i~~~ev~~~~~I~~Pfii~aMS~GslS~ea~~aLA~Aas~aGg~~~tGeGg~~pe~~~ 912 (1520)
T 1ofd_A 834 LKD-RPVTALRDLLDFNADQPAISLEEVESVESIVKRFCTGGMSLGALSREAHETLAIAMNRLGAKSNSGEGGEDVVRYL 912 (1520)
T ss_dssp HHT-CCSCSGGGGEEECCSSCCCCGGGSCCHHHHHTTEECCCBCTTTSCHHHHHHHHHHHHHHTCBCEECTTCCCGGGGS
T ss_pred hcC-CCCcchhhhccccCCCCCCCchhhcccccccCceEecCcCcccccHHHHHHHHHHHHHcCCceEeCCCCCCHHHHH
Confidence 887 5789999999999877899999999999999999999999999999999999999999999999999999999873
Q ss_pred -------------------cCCCcccccceeecccCCCCCChhhhccccchhhhcccCCCCCCCCCcccccchHHHHhcc
Q psy12805 427 -------------------SSGDENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGELPGYKVTKDIASTR 487 (1429)
Q Consensus 427 -------------------~~~~~~~~~~I~Q~asgrfGv~~~~L~~a~~ieIk~gQGAKpG~GG~lpg~KV~~~iA~~r 487 (1429)
..+++...+.|+|+++++|||+.+++.++++||||++||||||+||+||+.||+++||++|
T Consensus 913 ~eir~~~~~~~~~~p~~~~~~nG~~~~~~I~Ql~sg~FGVn~~~l~~ad~IeIKi~QGAKpG~GG~Lp~~kV~~~iA~~R 992 (1520)
T 1ofd_A 913 TLDDVDSEGNSPTLPHLHGLQNGDTANSAIKQIASGRFGVTPEYLMSGKQLEIKMAQGAKPGEGGQLPGKKVSEYIAMLR 992 (1520)
T ss_dssp CCCCCCTTSCCTTSTTCCSCCTTCCCCCSEEEECTTCTTCCHHHHHHCSEEEEECCCTTSTTSCCEECGGGCCHHHHHHH
T ss_pred hhhccccccccccccccccccCcchHHHHHHHhcCCCCccChhhccchHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHc
Confidence 1123345678999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCcccccc
Q psy12805 488 HSVPGVGLISPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTG 567 (1429)
Q Consensus 488 ~~~pg~~LisP~~h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~ 567 (1429)
|++||++++||++||||++++++.++|++||+.+|.+||+||+++++|++++|..++++|||+|+|+|++|||+++|+.+
T Consensus 993 ~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~ 1072 (1520)
T 1ofd_A 993 RSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSS 1072 (1520)
T ss_dssp TSCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHH
T ss_pred CCCCCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccc
Q psy12805 568 IKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGI 647 (1429)
Q Consensus 568 ~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~gi 647 (1429)
.+++|+||+.+|++++++|..+|+|++|+||++|||+|+.||+||++|||++|++||++|++++|+|||+||+|+||+||
T Consensus 1073 ~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~~~r~Ch~~~CP~Gv 1152 (1520)
T 1ofd_A 1073 IKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVGV 1152 (1520)
T ss_dssp HHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCCCCCCGGGTCCTTSS
T ss_pred hcCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHHHHHhccCCCCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCccccccCCCCCccccCCChhHHHHhhhccCCC
Q psy12805 648 ATQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKPREVGANPKAKMLNFAFLLKNALHMRPG 727 (1429)
Q Consensus 648 atqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~~~~~~~~k~~gldl~~l~~~~~~~~~~ 727 (1429)
+||||.|+++|.+++++|.||++.+.+||+++|+.+|+++++||+|+++++.......+|+.+++||+.||.++.. .++
T Consensus 1153 atqdp~L~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr~dll~~~~~~~~~~~~~ldl~~~l~~~~~-~~~ 1231 (1520)
T 1ofd_A 1153 ATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDLLKVRSDVQLSKTQNLTLDCLLNLPDT-KQN 1231 (1520)
T ss_dssp SCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTCGGGEEECSSCCCSSSSCCCCHHHHCCCCC-SSC
T ss_pred EeeCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCcceEEecccccccHhhcCCCHHHHcCCCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999998764444458999999999987542 111
Q ss_pred cccccCcccccCCccccccHHHH--HHHHhhhcCCCCcEEEEEEEeecCCcccccchhhhccccccCCCCCCcEEEEEeC
Q psy12805 728 VNIRAGSETQDHQLEKRLDNTLI--QECEPVLSGKVPRIDLEYTINNECRAFTATLSYHISIKTKEEGLPENSINLKLTG 805 (1429)
Q Consensus 728 ~~~~~~~~~~~~~~~~~l~~~~i--~~~~~~~~~~~~~~~~~~~i~n~~r~~g~~l~~~i~~~~g~~glp~~~i~i~~~g 805 (1429)
...+..+|+|.++..||.+++ +.++++++++. ++.+++.|.|+||++|++||++|+++||..|+ .++|+|+++|
T Consensus 1232 --~~~~~~~~~~~~~~~ld~~l~~~~~~~~a~~~~~-~~~~~~~i~n~~r~~g~~l~~~i~~~~g~~Gl-~~~i~i~v~G 1307 (1520)
T 1ofd_A 1232 --RQWLNHEPVHSNGPVLDDDILADPDIQEAINHQT-TATKTYRLVNTDRTVGTRLSGAIAKKYGNNGF-EGNITLNFQG 1307 (1520)
T ss_dssp --CGGGCCCSSCCCCSCHHHHHHHSHHHHHHHHHCC-EEEEEEEECTTCCSTTHHHHHHHHHHHTTTCC-CCEEEEEEEE
T ss_pred --CccccccCccccchhHHHHHhchHHHHHHHhcCC-cEEEEeeeeeecccccchhhhhhHHhhcccCC-CceEEEEEEC
Confidence 233345678888888999999 99999998765 78899999999999999999999999999999 7899999999
Q ss_pred CccchhhhcccCCeeEeecCCcccccCccchhhhhcccceEEEecccccccccccCCceEEEeCCCCCCCCCCccceecc
Q psy12805 806 SAGQSFCAFLVRGVHVTLEGDANDYVGKESFCAFLVRGVHVTLEGDANDYVGKGLSGGEIIIYPPKTSTFESDKNVIVGN 885 (1429)
Q Consensus 806 ~aG~s~Ga~~~~G~~i~v~g~~~~~~g~~~~~g~~~~~~~i~l~G~and~vgkgmsGG~ivv~p~~~~~~~~~~n~~~Gn 885 (1429)
++||||||||++|++ |+|+|+||||+||+|+||+|+|+|+.+++|.+++|+++||
T Consensus 1308 ~aGq~~Ga~m~~G~~-------------------------i~v~G~A~dyvGkgm~GG~IvV~g~~~~~~~~~~n~i~Gn 1362 (1520)
T 1ofd_A 1308 AAGQSFGAFNLDGMT-------------------------LHLQGEANDYVGKGMNGGEIVIVPHPQASFAPEDNVIIGN 1362 (1520)
T ss_dssp EECTTTTTTCCTTEE-------------------------EEEEEEECSCTTTTCCSSEEEEECCTTCCSCGGGSBCSCS
T ss_pred CHHHHHhhhCCCCCE-------------------------EEEEeecchhhhCcccCCEEEEECCCccccccccccchhh
Confidence 999999999999999 9999999999999999999999999999999999999999
Q ss_pred ccccccccCceeEecccCcceeeeecCceEEEcccCccccccccCceEEEeCCCCCcccccccccEEEEecCCCchhccc
Q psy12805 886 VCLYGATSGKAFFRGIAAERFSVRNSGAVAVVEGVGDHGCEYMTGGCAVILGLTGRNFAAGMSGGIAYVLDVDGSFAKKC 965 (1429)
Q Consensus 886 ~~~yg~tgG~~~i~g~ag~Rfgvr~sg~~~vv~G~g~~~~eyM~gG~ivvlG~~g~~~g~gM~gG~~yv~~~~~~f~~~~ 965 (1429)
+|+|||+||++||+|+||+|||+|||||++||+|+|||+|||||||+|||||++|+|||+||+||+|||+|++++|..++
T Consensus 1363 ~~~~ga~gG~i~V~G~aG~R~gvr~sg~~iVV~G~Gd~~~eyMtGG~vvVlG~~G~~~gagM~GG~iyv~~~~~~f~~~~ 1442 (1520)
T 1ofd_A 1363 TCLYGATGGNLYANGRAGERFAVRNSVGKAVIEGAGDHCCEYMTGGVIVVLGPVGRNVGAGMTGGLAYFLDEVGDLPEKI 1442 (1520)
T ss_dssp STTTTCCSCEEEESSBCCSSTTTTCSSCEEEESCCCSSTTTTCEEEEEEECSCCCSSBTTTCCEEEEEEECSSSCHHHHB
T ss_pred hhhhhccCcEEEEEeecchhhhhhccCCEEEecCchhhhhhhccCcEEEecCCCCcCccCCCcCcEEEEeCCCCChhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceEeeecCC--hhhHHHHHHHHHHHHHhhccHHHHHHhhcCCCCCCCeEEEecchh
Q psy12805 966 NMEMVELLPLEL--PEDLDYVKSLLVEFHEKTESEIAKNLLQTWPAPAKQFVKVTKDIA 1022 (1429)
Q Consensus 966 n~~~v~~~~~~~--~~~~~~l~~~~~~~~~~t~s~~a~~~l~~~~~~~~~f~kV~p~ia 1022 (1429)
|.++|++ +++ ++|+++|++||++|+++|+|+.|+.||++|+...++|+||+|...
T Consensus 1443 n~e~v~~--~~~~~~~d~~~l~~ll~~h~~~tgs~~a~~iL~~~~~~~~~F~kv~P~~~ 1499 (1520)
T 1ofd_A 1443 NPEIITL--QRITASKGEEQLKSLITAHVEHTGSPKGKAILANWSDYLGKFWQAVPPSE 1499 (1520)
T ss_dssp CTTTCEE--ECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHTHHHHHTTEEEEECTTS
T ss_pred CHHHHHh--cccCcHHHHHHHHHHHHHHHHHhCCHHHHHHHHhHHHHhcCEEEEecCCH
Confidence 9999997 442 678999999999999999999999999999999999999999643
No 3
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=100.00 E-value=1.9e-36 Score=394.35 Aligned_cols=463 Identities=25% Similarity=0.309 Sum_probs=334.5
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccc--cChH-------HHHHHHHhcCCcEEEEecCCCCCCcc
Q psy12805 493 VGLISPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSE--VGVG-------VVASGVAKGKAEHIVISGHDGGTGAS 563 (1429)
Q Consensus 493 ~~LisP~~h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e--~Gvg-------~vA~~~akaGaD~I~IsG~~GGTgaa 563 (1429)
..|-|| +.+.++|.++.. ..+...-|..-...+ .++. ..|..+++.|+.+|+||++..+.+.
T Consensus 539 ~~l~~P-----il~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~l~~al~~l~~~a~~av~~g~~iliLsDr~~~~~~- 609 (1520)
T 1ofd_A 539 IKLRSP-----LVNEVELQAIKT---GQLQVAEVSTLYDLDGVNSLEDALTNLVKTAIATVQAGAEILVLTDRPNGAIL- 609 (1520)
T ss_dssp EEESCS-----BCCHHHHHHHHH---SSSCEEEEECEEECSSSCCHHHHHHHHHHHHHHHHHTTCSEEEEESSGGGCCC-
T ss_pred EEeCCC-----ccCHHHHHHHhc---CCCceEEEEEEEeCCchhHHHHHHHHHHHHHHHHHHCCCcEEEEcCCCCcCCC-
Confidence 456666 788888887755 222222233333222 2332 2455677889999999999632111
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCCceEEE-EcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCC
Q psy12805 564 SWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQ-ADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNT 642 (1429)
Q Consensus 564 p~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Li-asGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~ 642 (1429)
+.+++.||.+++++.+|++|++.|||.+++|+ -+|..|+.+|++..+.+||++| +||+|+.++... ..
T Consensus 610 ---~~~~~~ip~lla~~avh~~Li~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av----~Pyla~e~~~~~----~~ 678 (1520)
T 1ofd_A 610 ---TENQSFIPPLLAVGAVHHHLIRAGLRLKASLIVDTAQCWSTHHFACLVGYGASAI----CPYLALESVRQW----WL 678 (1520)
T ss_dssp ---CTTEEECCHHHHHHHHHHHHHHTTCGGGCEEEEECSSCCSHHHHHHHHHTTCSEE----ECHHHHHHHHHH----HS
T ss_pred ---CCCccCcCHHHHHHHHHHHHHhcCCcccccEEEEeCCcChHHHHHHHHHcchhhh----cHHHHHHHHHHH----Hh
Confidence 25688899999999999999999999999998 6799999999999999999999 799998754311 01
Q ss_pred CCccceecCHHHHhhcC-Cc-HHHHHHHHHHHHHHHHHHHHhcCCCChh--------hhcCCC-ccccccCCCCCccccC
Q psy12805 643 CPVGIATQDPELRKKFA-GK-PEHVINYLFMLAEEVRTHMAKLGIRKFA--------DLVGRT-DLLKPREVGANPKAKM 711 (1429)
Q Consensus 643 cP~giatqd~~lr~~~~-g~-~e~v~ny~~~l~~eLr~iMa~mGi~sl~--------ElvGrs-dll~~~~~~~~~k~~g 711 (1429)
+| -||....+..+. .. .+.+.||++++.++|.|+|+||||++++ |.||++ +++..+++++.+++.|
T Consensus 679 ~~---~~~~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiFeavGl~~~~v~~~F~gt~s~i~G 755 (1520)
T 1ofd_A 679 DE---KTQKLMENGRLDRIDLPTALKNYRQSVEAGLFKILSKMGISLLASYHGAQIFEAIGLGAELVEYAFAGTTSRVGG 755 (1520)
T ss_dssp CH---HHHHHHTTSSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCCEEESSBCHHHHHHHSTTCCCTTCC
T ss_pred cc---cchhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceeeeecCCCHHHHHHhCCCCCcCCCC
Confidence 11 134334444443 23 4789999999999999999999999999 789999 6888889999999999
Q ss_pred CChhHHHHhhhcc----CC---CcccccCcccccCCcccc-ccHHHHHHHHhhhcC----------CCCcEEEEEE-Eee
Q psy12805 712 LNFAFLLKNALHM----RP---GVNIRAGSETQDHQLEKR-LDNTLIQECEPVLSG----------KVPRIDLEYT-INN 772 (1429)
Q Consensus 712 ldl~~l~~~~~~~----~~---~~~~~~~~~~~~~~~~~~-l~~~~i~~~~~~~~~----------~~~~~~~~~~-i~n 772 (1429)
++|+.|.++...+ ++ .....++.+++++..++| ++|++|..+|.+.+. +.+.++..|. +.|
T Consensus 756 ~~~~~i~~~~~~~h~~a~~~~~~~l~~~g~~~~r~~ge~h~~~p~~i~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 835 (1520)
T 1ofd_A 756 LTIADVAGEVMVFHGMAFPEMAKKLENFGFVNYRPGGEYHMNSPEMSKSLHKAVAAYKVGGNGNNGEAYDHYELYRQYLK 835 (1520)
T ss_dssp BCHHHHHHHHHHHHHHHC----CCCCCCSSSSCCTTSSCCSCCHHHHHHHHHHHHHC------------CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCcccCcCCCCCeeecCCCCCCCCCCHHHHHHHHHHHhcccCcccccccCCHHHHHHHHhhhc
Confidence 9999998764322 11 123467889999999999 589999999988865 3333334442 455
Q ss_pred cCCcccccchhhhccccccCCCCCCcEEEE-----EeCCccchhhhcccCCeeEeecCCcccccCccchhhhhcccceEE
Q psy12805 773 ECRAFTATLSYHISIKTKEEGLPENSINLK-----LTGSAGQSFCAFLVRGVHVTLEGDANDYVGKESFCAFLVRGVHVT 847 (1429)
Q Consensus 773 ~~r~~g~~l~~~i~~~~g~~glp~~~i~i~-----~~g~aG~s~Ga~~~~G~~i~v~g~~~~~~g~~~~~g~~~~~~~i~ 847 (1429)
. |.++ +|++.+.+++....+|.+.++.. -.-+++||+|+. +.+++..++.
T Consensus 836 ~-~~~~-~~r~l~~~~~~~~~i~~~ev~~~~~I~~Pfii~aMS~Gsl-----------------S~ea~~aLA~------ 890 (1520)
T 1ofd_A 836 D-RPVT-ALRDLLDFNADQPAISLEEVESVESIVKRFCTGGMSLGAL-----------------SREAHETLAI------ 890 (1520)
T ss_dssp T-CCSC-SGGGGEEECCSSCCCCGGGSCCHHHHHTTEECCCBCTTTS-----------------CHHHHHHHHH------
T ss_pred C-CCCc-chhhhccccCCCCCCCchhhcccccccCceEecCcCcccc-----------------cHHHHHHHHH------
Confidence 4 5454 59999999887666765544311 123689999876 3344445533
Q ss_pred EecccccccccccC--CceEEEeCCCCCCCCC----Cccceecccccc--ccccC---ceeEecccCcceeeeecCceEE
Q psy12805 848 LEGDANDYVGKGLS--GGEIIIYPPKTSTFES----DKNVIVGNVCLY--GATSG---KAFFRGIAAERFSVRNSGAVAV 916 (1429)
Q Consensus 848 l~G~and~vgkgms--GG~ivv~p~~~~~~~~----~~n~~~Gn~~~y--g~tgG---~~~i~g~ag~Rfgvr~sg~~~v 916 (1429)
.|+...+.+++ ||.. ..+|.. ..|+.+ ..... -..+| ...|++.++.||||+.
T Consensus 891 ---Aas~aGg~~~tGeGg~~------pe~~~~eir~~~~~~~-~~~p~~~~~~nG~~~~~~I~Ql~sg~FGVn~------ 954 (1520)
T 1ofd_A 891 ---AMNRLGAKSNSGEGGED------VVRYLTLDDVDSEGNS-PTLPHLHGLQNGDTANSAIKQIASGRFGVTP------ 954 (1520)
T ss_dssp ---HHHHHTCBCEECTTCCC------GGGGSCCCCCCTTSCC-TTSTTCCSCCTTCCCCCSEEEECTTCTTCCH------
T ss_pred ---HHHHcCCceEeCCCCCC------HHHHHhhhcccccccc-ccccccccccCcchHHHHHHHhcCCCCccCh------
Confidence 66666666666 3431 111210 000000 00000 01122 2468899999999961
Q ss_pred EcccCccccccccCceEEEeCCCCCcccccccccEEEEecCCCchhcccCccceEeeecCChhhHHHHHHHHHHHHHhhc
Q psy12805 917 VEGVGDHGCEYMTGGCAVILGLTGRNFAAGMSGGIAYVLDVDGSFAKKCNMEMVELLPLELPEDLDYVKSLLVEFHEKTE 996 (1429)
Q Consensus 917 v~G~g~~~~eyM~gG~ivvlG~~g~~~g~gM~gG~~yv~~~~~~f~~~~n~~~v~~~~~~~~~~~~~l~~~~~~~~~~t~ 996 (1429)
+|+ .+.++++++
T Consensus 955 ---------~~l------------------------------------~~ad~IeIK----------------------- 966 (1520)
T 1ofd_A 955 ---------EYL------------------------------------MSGKQLEIK----------------------- 966 (1520)
T ss_dssp ---------HHH------------------------------------HHCSEEEEE-----------------------
T ss_pred ---------hhc------------------------------------cchHHHHHH-----------------------
Confidence 232 156677776
Q ss_pred cHHHHHHhhcCCCCCCCe--EEEecchhccccCCCCCcccCCCCCCCCCCHHHHHHHHHHHhhhCCCCceeEEEeeeccc
Q psy12805 997 SEIAKNLLQTWPAPAKQF--VKVTKDIASTRHSVPGVGLISPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGV 1074 (1429)
Q Consensus 997 s~~a~~~l~~~~~~~~~f--~kV~p~ia~~r~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gv 1074 (1429)
++|+ +||++++++ .||.++||++|+++||+++||||+||||||++||+++|++||+.+|++||+||+|+.+|+
T Consensus 967 --i~QG---AKpG~GG~Lp~~kV~~~iA~~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi 1041 (1520)
T 1ofd_A 967 --MAQG---AKPGEGGQLPGKKVSEYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGI 1041 (1520)
T ss_dssp --CCCT---TSTTSCCEECGGGCCHHHHHHHTSCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTH
T ss_pred --Hhcc---CCCCCCCCCCHHHHHHHHHHHcCCCCCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCCh
Confidence 7888 999999998 899999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeccccceecceEecC
Q psy12805 1075 GVVASGVAKSIVSFEILP 1092 (1429)
Q Consensus 1075 ~~~a~g~ak~~~~~~~~~ 1092 (1429)
+++|.+++++.+|+.+.+
T Consensus 1042 ~~~A~~a~kAGAD~IvVs 1059 (1520)
T 1ofd_A 1042 GTIAAGVAKANADIIQIS 1059 (1520)
T ss_dssp HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 999999999999988764
No 4
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=100.00 E-value=2.4e-36 Score=392.62 Aligned_cols=442 Identities=26% Similarity=0.372 Sum_probs=332.4
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccC---hH-------HHHHHHHhcCCcEEEEecCCCCCCc
Q psy12805 493 VGLISPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVG---VG-------VVASGVAKGKAEHIVISGHDGGTGA 562 (1429)
Q Consensus 493 ~~LisP~~h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e~G---vg-------~vA~~~akaGaD~I~IsG~~GGTga 562 (1429)
..|-|| +.+.++|.++.. + ..+...-|..-...+.| +. ..|..+++.|+.+|+||++.-+
T Consensus 543 ~~l~~P-----il~~~~~~~l~~-~-~~~~~~~~~~~~~~~~g~~~l~~al~~l~~~a~~av~~g~~iliLsDr~~~--- 612 (1479)
T 1ea0_A 543 LQLESP-----VLTTAEFRAMRD-Y-MGDTAAEIDATFPVDGGPEALRDALRRIRQETEDAVRGGATHVILTDEAMG--- 612 (1479)
T ss_dssp EEESCS-----BCCHHHHHHHHH-H-HGGGEEEEECEEESTTCTTHHHHHHHHHHHHHHHHHHHTCCEEEEECTTCB---
T ss_pred EEeCCC-----cCCHHHHHHHhc-c-CCCceEEEEEEEECCCChhHHHHHHHHHHHHHHHHHHCCCcEEEECCCCCC---
Confidence 345555 778888887633 3 22323333333332312 11 2445577789999999999633
Q ss_pred cccccccccCCChHHHHHHHHHHHHhcCCCCceEEE-EcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccC
Q psy12805 563 SSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQ-ADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLN 641 (1429)
Q Consensus 563 ap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Li-asGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~ 641 (1429)
.+++.||.+++++.+|++|+++++|.+++|+ -+|..|+.+|++..+.+||++| +||+|+.++..
T Consensus 613 -----~~~~~ip~lla~~avh~~L~~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av----~Pyla~e~~~~------ 677 (1479)
T 1ea0_A 613 -----PARAAIPAILATGAVHTHLIRSNLRTFTSLNVRTAEGLDTHYFAVLIGVGATTV----NAYLAQEAIAE------ 677 (1479)
T ss_dssp -----TTEEECCHHHHHHHHHHHHHTTTCGGGCEEEEECSSCCSHHHHHHHHTTTCSEE----ECHHHHHHHHH------
T ss_pred -----CCccCcCHHHHHHHHHHHHHhcCccccceEEEEeCCchhHHHHHHHHhcCcccc----CHHHHHHHHHH------
Confidence 5688899999999999999999999999998 7799999999999999999999 79999864321
Q ss_pred CCCccceecCHHHHhhc-CCc-HHHHHHHHHHHHHHHHHHHHhcCCCChh--------hhcCCC-ccccccCCCCCcccc
Q psy12805 642 TCPVGIATQDPELRKKF-AGK-PEHVINYLFMLAEEVRTHMAKLGIRKFA--------DLVGRT-DLLKPREVGANPKAK 710 (1429)
Q Consensus 642 ~cP~giatqd~~lr~~~-~g~-~e~v~ny~~~l~~eLr~iMa~mGi~sl~--------ElvGrs-dll~~~~~~~~~k~~ 710 (1429)
...+..+ ... .+.+.||.+++.++|.|+|+||||++++ |.||++ +++..+++++.+++.
T Consensus 678 ----------~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiFeavGl~~~~v~~~F~gt~s~i~ 747 (1479)
T 1ea0_A 678 ----------RHRRGLFGSMPLEKGMANYKKAIDDGLLKIMSKMGISVISSYRGGGNFEAIGLSRALVAEHFPAMVSRIS 747 (1479)
T ss_dssp ----------HHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHTTSCCEEESSBCHHHHHHHSSSCCCSSC
T ss_pred ----------HHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceeeeecCCCHHHHHHhcCCCCcccC
Confidence 1111222 122 4789999999999999999999999999 789999 688888999999999
Q ss_pred CCChhHHHHhhhcc-------CCCcccccCcccccCCcccc-ccHHHHHHHHhhhcCCCCcEEEEE-EEeecCCcccccc
Q psy12805 711 MLNFAFLLKNALHM-------RPGVNIRAGSETQDHQLEKR-LDNTLIQECEPVLSGKVPRIDLEY-TINNECRAFTATL 781 (1429)
Q Consensus 711 gldl~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-l~~~~i~~~~~~~~~~~~~~~~~~-~i~n~~r~~g~~l 781 (1429)
|++|+.|.++...+ .......++.+++++..++| ++|++|..+|.+.+.+.++++..| ...|. |.++ ++
T Consensus 748 G~~~~~i~~~~~~~h~~a~~~~~~~l~~~g~~~~r~~ge~h~~~p~~i~~l~~~~~~g~~~~~~~~~~~~~~-~~~~-~~ 825 (1479)
T 1ea0_A 748 GIGLNGIQKKVLEQHATAYNEEVVALPVGGFYRFRKSGDRHGWEGGVIHTLQQAVTNDSYTTFKKYSEQVNK-RPPM-QL 825 (1479)
T ss_dssp CBCHHHHHHHHHHHHHHHHSSCCSSCCCCCSSSCCSSSSCCSSCHHHHHHHHHHHHHTCHHHHHHHHHHHHT-SCCC-SG
T ss_pred CCCHHHHHHHHHHHHHHhcCcccccCCCCCeeecCCCCCccCCCHHHHHHHHHHHHhCCHHHHHHHHhhhcc-CCCC-ch
Confidence 99999998763222 11123467889999999999 689999999999887766666565 34555 5555 49
Q ss_pred hhhhccccccCCCCCCcEEEE-----EeCCccchhhhcccCCeeEeecCCcccccCccchhhhhcccceEEEeccccccc
Q psy12805 782 SYHISIKTKEEGLPENSINLK-----LTGSAGQSFCAFLVRGVHVTLEGDANDYVGKESFCAFLVRGVHVTLEGDANDYV 856 (1429)
Q Consensus 782 ~~~i~~~~g~~glp~~~i~i~-----~~g~aG~s~Ga~~~~G~~i~v~g~~~~~~g~~~~~g~~~~~~~i~l~G~and~v 856 (1429)
++.+.+++....+|.+.++.. -.-+++||||+. +.+++..++. .|+...
T Consensus 826 ~dl~~~~~~l~~i~~~ev~~~~~I~~Pf~isaMS~Gal-----------------S~ea~~aLA~---------Aa~~aG 879 (1479)
T 1ea0_A 826 RDLLELRSTKAPVPVDEVESITAIRKRFITPGMSMGAL-----------------SPEAHGTLNV---------AMNRIG 879 (1479)
T ss_dssp GGGEEECCSSCCCCGGGSCCHHHHHTTEEEEECCBTTB-----------------CHHHHHHHHH---------HHHHTT
T ss_pred hhhhhccCCCCCCCcccccccccccCCeEecCcccccc-----------------CHHHHHHHHH---------HHHHcC
Confidence 999998887666765543310 112688999877 3444555533 666666
Q ss_pred ccccCC--ceEEEeCCCCCCCCCCccceeccccccccccCceeEecccCcceeeeecCceEEEcccCccccccccCceEE
Q psy12805 857 GKGLSG--GEIIIYPPKTSTFESDKNVIVGNVCLYGATSGKAFFRGIAAERFSVRNSGAVAVVEGVGDHGCEYMTGGCAV 934 (1429)
Q Consensus 857 gkgmsG--G~ivv~p~~~~~~~~~~n~~~Gn~~~yg~tgG~~~i~g~ag~Rfgvr~sg~~~vv~G~g~~~~eyM~gG~iv 934 (1429)
+.+++| |.. ..+|.+..| | ....-.|++.+..||||+ . +|+
T Consensus 880 g~~~tGeGg~~------pe~~~~~~~---------g-~~~~~~IrQ~asg~FGVn-----~----------~~l------ 922 (1479)
T 1ea0_A 880 AKSDSGEGGED------PARFRPDKN---------G-DNWNSAIKQVASGRFGVT-----A----------EYL------ 922 (1479)
T ss_dssp CEEECCTTCCC------GGGSSBCTT---------S-CBCCCSEEEECSSCTTCC-----H----------HHH------
T ss_pred CeeEcCCCccC------HHHhhhccc---------c-chhhhhhhhhcCCCCCcC-----h----------HHc------
Confidence 666553 331 112211111 1 112235799999999996 1 233
Q ss_pred EeCCCCCcccccccccEEEEecCCCchhcccCccceEeeecCChhhHHHHHHHHHHHHHhhccHHHHHHhhcCCCCCCCe
Q psy12805 935 ILGLTGRNFAAGMSGGIAYVLDVDGSFAKKCNMEMVELLPLELPEDLDYVKSLLVEFHEKTESEIAKNLLQTWPAPAKQF 1014 (1429)
Q Consensus 935 vlG~~g~~~g~gM~gG~~yv~~~~~~f~~~~n~~~v~~~~~~~~~~~~~l~~~~~~~~~~t~s~~a~~~l~~~~~~~~~f 1014 (1429)
.|.++++|+ ++|+ ++|++++++
T Consensus 923 ------------------------------~~a~~ieIK-------------------------igQG---AKpG~GG~L 944 (1479)
T 1ea0_A 923 ------------------------------NQCRELEIK-------------------------VAQG---AKPGEGGQL 944 (1479)
T ss_dssp ------------------------------TSCSEEEEE-------------------------CCCT---TSTTTCCEE
T ss_pred ------------------------------cccchHHHH-------------------------Hhcc---CCCCcCCCC
Confidence 377788886 7788 999999998
Q ss_pred --EEEecchhccccCCCCCcccCCCCCCCCCCHHHHHHHHHHHhhhCCCCceeEEEeeeccccceeccccceecceEecC
Q psy12805 1015 --VKVTKDIASTRHSVPGVGLISPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKSIVSFEILP 1092 (1429)
Q Consensus 1015 --~kV~p~ia~~r~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gv~~~a~g~ak~~~~~~~~~ 1092 (1429)
.||.++||++|++++|+++||||+||||||++||+++|++||+.+|++||+||+|+.+|++++|.+++++.+|+.+.+
T Consensus 945 p~~kv~~~IA~~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVs 1024 (1479)
T 1ea0_A 945 PGFKVTEMIARLRHSTPGVMLISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILIS 1024 (1479)
T ss_dssp CGGGCCHHHHHHHTCCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHcCCCCCCCccCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEc
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999988775
No 5
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.96 E-value=4e-30 Score=301.44 Aligned_cols=296 Identities=19% Similarity=0.159 Sum_probs=231.0
Q ss_pred CCCCCCCCcccc-----cccceeeCCCCCcc-chHHHHHHHHHHHHHhCCcEEecCCCC---CccccccCCCccccccee
Q psy12805 368 PVDISEVEPAAE-----IVKRFATGAMSFGS-ISIEAHTTLAKAMNKIGAKSNTGEGGE---NPERYLSSGDENQRSAIK 438 (1429)
Q Consensus 368 ~i~~~~v~~~~~-----i~~pf~i~aMS~Gs-lS~ea~~aLA~aa~~~G~~~~tGEGg~---~~~~~~~~~~~~~~~~I~ 438 (1429)
.+++++|++.++ +..||++++||+|+ ...++|+.||++|+++|+.+.+||+.. +|+.+ ..++.++
T Consensus 41 ~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~------~s~~~vr 114 (368)
T 3vkj_A 41 GISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEAR------ESFAIVR 114 (368)
T ss_dssp BSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGS------HHHHHHH
T ss_pred ccCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHH------hhHHHHH
Confidence 367889988876 56899999999996 688999999999999999999999942 34432 2234467
Q ss_pred ecccCCCCCChhhhccccchhhhcccCCCCCCCCCcccccchHH---HHhccCCCCccccccCCCCCCCCCHHHHHHHHH
Q psy12805 439 QVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGELPGYKVTKD---IASTRHSVPGVGLISPPPHHDIYSIEDLAELIY 515 (1429)
Q Consensus 439 Q~asgrfGv~~~~L~~a~~ieIk~gQGAKpG~GG~lpg~KV~~~---iA~~r~~~pg~~LisP~~h~di~siedL~qlI~ 515 (1429)
+.++..+ .+.|..++||+-+.+.+ ...+..++ -|...|+||.+++++|++|+||+ ..+.+.|+
T Consensus 115 ~~ap~~~-----~~anlg~~ql~~~~~~~-------~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~--~~~~~~i~ 180 (368)
T 3vkj_A 115 KVAPTIP-----IIANLGMPQLVKGYGLK-------EFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQ--IYALEKLR 180 (368)
T ss_dssp HHCSSSC-----EEEEEEGGGGGTTCCHH-------HHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCB--THHHHHHH
T ss_pred HhCcCcc-----eecCcCeeecCCCCCHH-------HHHHHHHHhcCCCeEEEecchhhhhCCCCCchhh--HHHHHHHH
Confidence 7777543 67888999996322111 12222222 25567999999999999999996 23556778
Q ss_pred HHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCcccccc----------------ccccCCChHHHH
Q psy12805 516 DLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTG----------------IKNAGLPWELGV 579 (1429)
Q Consensus 516 ~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~----------------~~~~GiP~~laL 579 (1429)
.+++.. ++||+||.+...-....|..+.++|+|+|+|+|+ |||++++.+. ..+||+|+..+|
T Consensus 181 ~i~~~~-~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~-GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l 258 (368)
T 3vkj_A 181 DISKEL-SVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQ-GGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASI 258 (368)
T ss_dssp HHHTTC-SSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCB-TSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHH
T ss_pred HHHHHc-CCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCC-CCCcccchhhhhcccccccchhhccccccccccHHHHH
Confidence 888876 7999999542111335788899999999999999 6676663321 246799999999
Q ss_pred HHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcC
Q psy12805 580 AETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFA 659 (1429)
Q Consensus 580 ~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~ 659 (1429)
.++.+.+ .+++||++|||+|+.|++|++++||++|++|+++|.++.
T Consensus 259 ~~v~~~~------~~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~~---------------------------- 304 (368)
T 3vkj_A 259 MEVRYSV------PDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAI---------------------------- 304 (368)
T ss_dssp HHHHHHS------TTCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHH----------------------------
T ss_pred HHHHHHc------CCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHh----------------------------
Confidence 9988764 259999999999999999999999999999998887651
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCccccccCCCCCccccCCChhHHHHh
Q psy12805 660 GKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKPREVGANPKAKMLNFAFLLKN 720 (1429)
Q Consensus 660 g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~~~~~~~~k~~gldl~~l~~~ 720 (1429)
.+++.|.++++.+.+||+.+|+.+|+++++|+. +.+++.......|.+.+++|++.+..+
T Consensus 305 ~G~~~v~~~l~~l~~eL~~~m~~~G~~~i~el~-~~~l~~~~~l~~~~~~r~~~~~~~~~~ 364 (368)
T 3vkj_A 305 EGKESLEQFFRKIIFELKAAMMLTGSKDVDALK-KTSIVILGKLKEWAEYRGINLSIYEKV 364 (368)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHH-TCCEEECHHHHHHHHHHTCCHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHHHHHhCCCCHHHhc-cCCEEechhHHHHHHHcCCChHHHHhh
Confidence 246899999999999999999999999999985 677777665556778899999988765
No 6
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.95 E-value=2.3e-28 Score=285.90 Aligned_cols=272 Identities=21% Similarity=0.194 Sum_probs=187.1
Q ss_pred CCCCCCCcccc-----cccceeeCCCCCcc-chHHHHHHHHHHHHHhCCcEEecCCCCCccccccCCCcccccceeeccc
Q psy12805 369 VDISEVEPAAE-----IVKRFATGAMSFGS-ISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVAS 442 (1429)
Q Consensus 369 i~~~~v~~~~~-----i~~pf~i~aMS~Gs-lS~ea~~aLA~aa~~~G~~~~tGEGg~~~~~~~~~~~~~~~~~I~Q~as 442 (1429)
+++++|++.++ +..||+|++||+|+ .++++|++||++|+++|+.+++||+....+.- .. ....|+|.++
T Consensus 69 ~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~~----~~-~~~~v~r~~P 143 (365)
T 3sr7_A 69 YDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTALKNP----DD-TSYQVKKSRP 143 (365)
T ss_dssp SCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC---------------------------
T ss_pred CCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccccccCc----cc-cceEehhhCC
Confidence 67888888776 56899999999997 69999999999999999999999997644331 11 1122444444
Q ss_pred CCCCCChhhhccccchhhhcccCCCCCCCCCcccccchHHH---HhccCCCCccccccCCCCCCCCCHHHHHHHHHHHHH
Q psy12805 443 GRFGVTSSYLAHADDLQIKMAQGAKPGEGGELPGYKVTKDI---ASTRHSVPGVGLISPPPHHDIYSIEDLAELIYDLKC 519 (1429)
Q Consensus 443 grfGv~~~~L~~a~~ieIk~gQGAKpG~GG~lpg~KV~~~i---A~~r~~~pg~~LisP~~h~di~siedL~qlI~~Lk~ 519 (1429)
..+. +.|...- .+. . ...+..+.+ |...|+++.|++++|++++++. ++.+.|++||+
T Consensus 144 ~~~~-----ianig~~--------~~~---e-~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~---~~~~~I~~l~~ 203 (365)
T 3sr7_A 144 HLLL-----ATNIGLD--------KPY---Q-AGLQAVRDLQPLFLQVHINLMQELLMPEGEREFR---SWKKHLSDYAK 203 (365)
T ss_dssp -CCE-----EEEEETT--------SCH---H-HHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCH---HHHHHHHHHHH
T ss_pred CCcE-----EEEeCCC--------CCH---H-HHHHHHHhcCCCEEEEeccccccccCCCCCCcHH---HHHHHHHHHHH
Confidence 4442 2222210 000 0 011222222 5567899999999999999984 56678888988
Q ss_pred hCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCcccccc--------ccccCCChHHHHHHHHHHHHhcCC
Q psy12805 520 ANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTG--------IKNAGLPWELGVAETHQVLALNNL 591 (1429)
Q Consensus 520 ~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~--------~~~~GiP~~laL~ev~q~L~~~gL 591 (1429)
.+ ++||+||.+...-....|..+.++|+|+|+|+|+ |||.++.+.. ..+||+|+..+|.++.. +
T Consensus 204 ~~-~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~-GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~------~ 275 (365)
T 3sr7_A 204 KL-QLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGR-GGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQP------L 275 (365)
T ss_dssp HC-CSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCB-C--------------CGGGTTCSCBHHHHHHHHGG------G
T ss_pred hh-CCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCC-CCcccchhhccccccccccccccccHHHHHHHHHH------h
Confidence 87 7999999642212345788899999999999999 6666544322 34799999998886532 3
Q ss_pred CCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCcHHHHHHHHHH
Q psy12805 592 RSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEHVINYLFM 671 (1429)
Q Consensus 592 R~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~~~ 671 (1429)
+.+++||++|||+|+.|++||++||||+|++|+++|.++.| .+++.|.++++.
T Consensus 276 ~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~---------------------------~G~~~v~~~l~~ 328 (365)
T 3sr7_A 276 MDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQ---------------------------HSVHEVIAIVNG 328 (365)
T ss_dssp TTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHH---------------------------SCHHHHHHHHHH
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHh---------------------------cChHHHHHHHHH
Confidence 45799999999999999999999999999999999998764 246889999999
Q ss_pred HHHHHHHHHHhcCCCChhhhcCCCcccccc
Q psy12805 672 LAEEVRTHMAKLGIRKFADLVGRTDLLKPR 701 (1429)
Q Consensus 672 l~~eLr~iMa~mGi~sl~ElvGrsdll~~~ 701 (1429)
+.+||+.+|..+|+++++|| .+.+++...
T Consensus 329 l~~eL~~~m~~~G~~si~eL-~~~~~~~~~ 357 (365)
T 3sr7_A 329 WKEDLRLIMCALNCQTIAEL-RNVDYLLYG 357 (365)
T ss_dssp HHHHHHHHHHHTTCSSTGGG-GGCCEEECH
T ss_pred HHHHHHHHHHHhCCcCHHHh-ccCCEEEcc
Confidence 99999999999999999998 456666544
No 7
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.86 E-value=2.2e-21 Score=225.03 Aligned_cols=268 Identities=22% Similarity=0.193 Sum_probs=185.1
Q ss_pred CCCCCCCcccc-----cccceeeCCCCCcc-chHHHHHHHHHHHHHhCCcEEecCCCCCccccccCCCcccccceeeccc
Q psy12805 369 VDISEVEPAAE-----IVKRFATGAMSFGS-ISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVAS 442 (1429)
Q Consensus 369 i~~~~v~~~~~-----i~~pf~i~aMS~Gs-lS~ea~~aLA~aa~~~G~~~~tGEGg~~~~~~~~~~~~~~~~~I~Q~as 442 (1429)
++.+++++.++ +..||++++|++|+ .+++++.++|++|.+.|+.+++||+....+.. +.. ...|+ .
T Consensus 41 ~~~~~~d~~~~i~g~~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~~~~~~~~le~~---~~~----~~~ql-~ 112 (332)
T 1vcf_A 41 LALSEVDLTTPFLGKTLKAPFLIGAMTGGEENGERINLALAEAAEALGVGMMLGSGRILLERP---EAL----RSFRV-R 112 (332)
T ss_dssp CCGGGCCCCEEETTEEESSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEEEEECHHHHHCT---TTH----HHHCC-T
T ss_pred CCCCCCCcceEECCcccCCceEEeccccCCcchhHHHHHHHHHHHHcCCCEEeCCchhcccCC---Ccc----ceEEe-e
Confidence 46667776665 56899999999986 67889999999999999999999985432210 111 11233 1
Q ss_pred CCCCCChhhhccccchhhhcccCCCCCCCCCcccccchHH---HHhccCCCCccccccCCCCCCCCCHHHHHHHHHHHHH
Q psy12805 443 GRFGVTSSYLAHADDLQIKMAQGAKPGEGGELPGYKVTKD---IASTRHSVPGVGLISPPPHHDIYSIEDLAELIYDLKC 519 (1429)
Q Consensus 443 grfGv~~~~L~~a~~ieIk~gQGAKpG~GG~lpg~KV~~~---iA~~r~~~pg~~LisP~~h~di~siedL~qlI~~Lk~ 519 (1429)
...++...+.|.+..|+.- ..|.. ..+..+. .+...|.+++++.++ .+++++.. +.+.|+.+|+
T Consensus 113 -~~~~d~pv~~~~~~~q~~~---~~~~~-----~~~a~~~~~~~a~~i~~n~~~~~~~-~~~~~~~~---~~~~i~~vr~ 179 (332)
T 1vcf_A 113 -KVAPKALLIANLGLAQLRR---YGRDD-----LLRLVEMLEADALAFHVNPLQEAVQ-RGDTDFRG---LVERLAELLP 179 (332)
T ss_dssp -TTCSSSCEEEEEEGGGGGT---CCHHH-----HHHHHHHHTCSEEEEECCHHHHHHT-TSCCCCTT---HHHHHHHHCS
T ss_pred -ccCCCceeecccChhhhhc---cChHH-----HHHHHhhcCCCceeeccchHHHHhc-CCCccHHH---HHHHHHHHHc
Confidence 1112222333444444420 00000 0000000 012356677777777 78888753 6667889998
Q ss_pred hCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccc----------cccCCChHHHHHHHHHHHHhc
Q psy12805 520 ANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGI----------KNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 520 ~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~----------~~~GiP~~laL~ev~q~L~~~ 589 (1429)
+ +.||+||.+..--....|..+.++|+|+|++||++|+|++.+.... .++|+|+..+|.++.+.+
T Consensus 180 -~-~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~--- 254 (332)
T 1vcf_A 180 -L-PFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVL--- 254 (332)
T ss_dssp -C-SSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHC---
T ss_pred -C-CCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhc---
Confidence 6 7999999532111234577889999999999999776544332211 468999999998887754
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCcHHHHHHHH
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEHVINYL 669 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~ 669 (1429)
. +++||++|||+|+.|++|++++|||+|++|+++|.++ | .+++.|.+++
T Consensus 255 --~-~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~-~---------------------------~G~~gv~~~~ 303 (332)
T 1vcf_A 255 --P-HLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPA-L---------------------------EGAERVAAWI 303 (332)
T ss_dssp --S-SSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHH-T---------------------------TCHHHHHHHH
T ss_pred --C-CCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHH-h---------------------------ccHHHHHHHH
Confidence 1 5999999999999999999999999999999888765 2 3467899999
Q ss_pred HHHHHHHHHHHHhcCCCChhhhcC
Q psy12805 670 FMLAEEVRTHMAKLGIRKFADLVG 693 (1429)
Q Consensus 670 ~~l~~eLr~iMa~mGi~sl~ElvG 693 (1429)
+.+.+||+.+|..+|+++++|+.+
T Consensus 304 ~~l~~el~~~m~~~G~~~i~el~~ 327 (332)
T 1vcf_A 304 GDYLEELRTALFAIGARNPKEARG 327 (332)
T ss_dssp HHHHHHHHHHHHHHTCSSGGGGTT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHhh
Confidence 999999999999999999999854
No 8
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.85 E-value=3.7e-21 Score=236.51 Aligned_cols=181 Identities=18% Similarity=0.233 Sum_probs=152.0
Q ss_pred eEEEccCCCCCcCC-----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc-----cccccccchhhcc
Q psy12805 1211 FIKYSRETAPYRPA-----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL-----GNIIPKWNDLIYH 1280 (1429)
Q Consensus 1211 f~kiAtGs~P~~p~-----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V-----~~iLp~~d~lvf~ 1280 (1429)
++.||||++|..|+ ...+.|+++++++...|++++|||||+||||+++.++++|++| .++||.+|+
T Consensus 188 ~iiIATGs~P~~P~~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~~D~---- 263 (542)
T 4b1b_A 188 YILIATGCRPHIPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRGFDQ---- 263 (542)
T ss_dssp EEEECCCEEECCCSSSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTTSCH----
T ss_pred eEEeccCCCCCCCCcccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccccch----
Confidence 37899999999884 3457899999999999999999999999999999999999999 566777777
Q ss_pred chHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-hhccCccccCCC
Q psy12805 1281 NNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDPRS 1357 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~~G 1357 (1429)
++.+.+.+.|+++| +.++..+.+++.. ++... +...+ ..++++|.||+|+|++|+...| ++.+|++++.++
T Consensus 264 -ei~~~l~~~l~~~gi~~~~~~~v~~~~~~---~~~~~-v~~~~-~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~ 337 (542)
T 4b1b_A 264 -QCAVKVKLYMEEQGVMFKNGILPKKLTKM---DDKIL-VEFSD-KTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSN 337 (542)
T ss_dssp -HHHHHHHHHHHHTTCEEEETCCEEEEEEE---TTEEE-EEETT-SCEEEESEEEECSCEEESCGGGCGGGTTCCEETTT
T ss_pred -hHHHHHHHHHHhhcceeecceEEEEEEec---CCeEE-EEEcC-CCeEEEEEEEEcccccCCccccCcccceeeecccC
Confidence 99999999999998 4567777777653 33333 23333 3368899999999999777777 899999999887
Q ss_pred CEEecCCCCccCCCCEEEeCCCCCC-CCcHHHHHHHHHHHHHHHH
Q psy12805 1358 NYSTVEKTYLTTVPRVYAAGDCRRG-QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1358 ~I~VD~~~~~TSvPgVFAAGD~a~g-~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
.+++++.+++||+|+|||+|||+.+ +++.+.|..||+.|+.++.
T Consensus 338 ~~i~vd~~~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~ 382 (542)
T 4b1b_A 338 NKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLF 382 (542)
T ss_dssp TEECCCTTSBCSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ceEeccccccccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHh
Confidence 7755445999999999999999976 6899999999999999886
No 9
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.84 E-value=1.2e-20 Score=220.00 Aligned_cols=282 Identities=19% Similarity=0.192 Sum_probs=184.5
Q ss_pred CCCCCCCcccc-----cccceeeCCCCCcc--chHHHHHHHHHHHHHhCCcEEecCCCCCccccccCCCcccccceeecc
Q psy12805 369 VDISEVEPAAE-----IVKRFATGAMSFGS--ISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVA 441 (1429)
Q Consensus 369 i~~~~v~~~~~-----i~~pf~i~aMS~Gs--lS~ea~~aLA~aa~~~G~~~~tGEGg~~~~~~~~~~~~~~~~~I~Q~a 441 (1429)
++++++++.++ +..||++++|++++ .+++++.++|++|.+.|+.+++|++....+.- ......+.+++.+
T Consensus 38 ~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~l~~~---~~~~~~~~~~~~~ 114 (349)
T 1p0k_A 38 LALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSALKDP---SERLSYEIVRKEN 114 (349)
T ss_dssp CCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTTTTCH---HHHHHHHHHHHHC
T ss_pred CCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhcccCc---ccccceehhhhhC
Confidence 35566666555 55899999999886 77888999999999999999999875432110 0000011111111
Q ss_pred cC------CC-CCChhhhc------cccchhhhcccCCCCCCCCCcccccchHHHHhccCCCCccccccCCCCCCCCCHH
Q psy12805 442 SG------RF-GVTSSYLA------HADDLQIKMAQGAKPGEGGELPGYKVTKDIASTRHSVPGVGLISPPPHHDIYSIE 508 (1429)
Q Consensus 442 sg------rf-Gv~~~~L~------~a~~ieIk~gQGAKpG~GG~lpg~KV~~~iA~~r~~~pg~~LisP~~h~di~sie 508 (1429)
.. .. |.+++.+. .+++|+|. ..+.++.++|.+++++..
T Consensus 115 ~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~---------------------------~~~~~~~~~~~~~~~~~~-- 165 (349)
T 1p0k_A 115 PNGLIFANLGSEATAAQAKEAVEMIGANALQIH---------------------------LNVIQEIVMPEGDRSFSG-- 165 (349)
T ss_dssp SSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEE---------------------------ECTTTTC--------CTT--
T ss_pred CCceeEEeecCCCCHHHHHHHHHhcCCCeEEec---------------------------ccchhhhcCCCCCcchHH--
Confidence 10 00 22332211 12333332 223334556666655533
Q ss_pred HHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCcccccc---------ccccCCChHHHH
Q psy12805 509 DLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTG---------IKNAGLPWELGV 579 (1429)
Q Consensus 509 dL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~---------~~~~GiP~~laL 579 (1429)
+.+.|+.+|+.. +.||.||++...--...|..+.++|+|.|+++++ |||.+.+... ...+|+|+..+|
T Consensus 166 -~~~~i~~vr~~~-~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~-ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l 242 (349)
T 1p0k_A 166 -ALKRIEQICSRV-SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGY-GGTNFSKIENLRRQRQISFFNSWGISTAASL 242 (349)
T ss_dssp -HHHHHHHHHHHC-SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC----------------CCGGGGTTCSCCHHHHH
T ss_pred -HHHHHHHHHHHc-CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCC-CCcchhhHHHhhcccchhhhhccCccHHHHH
Confidence 556778888776 7999999853211245678889999999999998 4555443322 136789998888
Q ss_pred HHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcC
Q psy12805 580 AETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFA 659 (1429)
Q Consensus 580 ~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~ 659 (1429)
.++.+.+ .+++||++|||+|+.|+.+++++|||+|++|++++....|
T Consensus 243 ~~v~~~~------~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~--------------------------- 289 (349)
T 1p0k_A 243 AEIRSEF------PASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTD--------------------------- 289 (349)
T ss_dssp HHHHHHC------TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHH---------------------------
T ss_pred HHHHHhc------CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhh---------------------------
Confidence 8887643 3699999999999999999999999999999988886542
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCccccccCCCCCccccCCChhHHHH
Q psy12805 660 GKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKPREVGANPKAKMLNFAFLLK 719 (1429)
Q Consensus 660 g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~~~~~~~~k~~gldl~~l~~ 719 (1429)
.+++.+.++++.+.+||+..|..+|+++++|+ .+.+++.......|.+.+++|++.+..
T Consensus 290 ~g~~~~~~~~~~~~~~l~~~m~~~G~~~i~el-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (349)
T 1p0k_A 290 SGEEGLLEEIQLILEELKLIMTVLGARTIADL-QKAPLVIKGETHHWLTERGVNTSSYSV 348 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCBHHHH-TTCCEEECHHHHHHHHHTTCCSHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH-hhCCeeccHHHHHHHHHcCCCHHhhhc
Confidence 23578899999999999999999999999998 456666554555566777888876543
No 10
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.80 E-value=2.5e-19 Score=211.95 Aligned_cols=275 Identities=19% Similarity=0.200 Sum_probs=179.9
Q ss_pred CCCCCCcccc-----cccceeeCCCCCccch-HHHHHHHHHHHHHhCCcEEecCCCC-CccccccCCCcccccceeec-c
Q psy12805 370 DISEVEPAAE-----IVKRFATGAMSFGSIS-IEAHTTLAKAMNKIGAKSNTGEGGE-NPERYLSSGDENQRSAIKQV-A 441 (1429)
Q Consensus 370 ~~~~v~~~~~-----i~~pf~i~aMS~GslS-~ea~~aLA~aa~~~G~~~~tGEGg~-~~~~~~~~~~~~~~~~I~Q~-a 441 (1429)
+.+++++.++ +..||++++|+++.++ ++...++|++|++.|+.+++++... ..++..... . ......|+ .
T Consensus 78 ~~~~~d~st~i~G~~l~~Pi~iAPmg~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~-~-~~~~~~QLy~ 155 (392)
T 2nzl_A 78 NVAETDLSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAG-P-EALRWLQLYI 155 (392)
T ss_dssp CCTTCBCCEEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHC-T-TSEEEEEECC
T ss_pred CCcCCCcceEECCEecCCceEeccccccccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhc-C-CCcEEEEEEe
Confidence 3455555555 5689999999777776 8899999999999999999998763 344432110 0 12234564 3
Q ss_pred cCCCCCChhhhccccchh---hhcccCCCCCCCC---------Ccccc----cchHHHHh-c--cCCCCcc---ccccCC
Q psy12805 442 SGRFGVTSSYLAHADDLQ---IKMAQGAKPGEGG---------ELPGY----KVTKDIAS-T--RHSVPGV---GLISPP 499 (1429)
Q Consensus 442 sgrfGv~~~~L~~a~~ie---Ik~gQGAKpG~GG---------~lpg~----KV~~~iA~-~--r~~~pg~---~LisP~ 499 (1429)
+...+++.+.+..+++.. |-+..++ |..|- .+|.+ .+..++.. . +....+. .++++.
T Consensus 156 ~~d~~~~~~~~~ra~~~G~~al~itvd~-p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~ 234 (392)
T 2nzl_A 156 YKDREVTKKLVRQAEKMGYKAIFVTVDT-PYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKA 234 (392)
T ss_dssp BSSHHHHHHHHHHHHHTTCCCEEEECSC-SSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCC-CCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhc
Confidence 333444444444432222 2223333 32210 01110 11100000 0 0000011 122222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHH
Q psy12805 500 PHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGV 579 (1429)
Q Consensus 500 ~h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL 579 (1429)
.++++ ++++ |+.+|+.+ +.||+||.+. ....|..+.++|+|.|+|+|++|. ..++|.|+..+|
T Consensus 235 ~d~~~-~~~~----i~~lr~~~-~~PvivKgv~---~~e~A~~a~~aGad~I~vs~~ggr--------~~~~g~~~~~~l 297 (392)
T 2nzl_A 235 IDPSI-SWED----IKWLRRLT-SLPIVAKGIL---RGDDAREAVKHGLNGILVSNHGAR--------QLDGVPATIDVL 297 (392)
T ss_dssp BCTTC-CHHH----HHHHC--C-CSCEEEEEEC---CHHHHHHHHHTTCCEEEECCGGGT--------SSTTCCCHHHHH
T ss_pred CChHH-HHHH----HHHHHHhh-CCCEEEEecC---CHHHHHHHHHcCCCEEEeCCCCCC--------cCCCCcChHHHH
Confidence 23332 3443 67777776 6899999662 345688899999999999998653 247899999999
Q ss_pred HHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcC
Q psy12805 580 AETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFA 659 (1429)
Q Consensus 580 ~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~ 659 (1429)
.++.+.+ +++++||++|||+|+.|++||+++|||+|++|+++|.+++|
T Consensus 298 ~~v~~av-----~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~~--------------------------- 345 (392)
T 2nzl_A 298 PEIVEAV-----EGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAF--------------------------- 345 (392)
T ss_dssp HHHHHHH-----TTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHH---------------------------
T ss_pred HHHHHHc-----CCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHHh---------------------------
Confidence 9998875 34799999999999999999999999999999999987753
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCcc
Q psy12805 660 GKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDL 697 (1429)
Q Consensus 660 g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdl 697 (1429)
++.+.+.++++.+.+||+..|..+|+++++|+ .+..+
T Consensus 346 ~g~~gv~~~l~~l~~el~~~m~~~G~~~i~el-~~~~l 382 (392)
T 2nzl_A 346 QGEKGVQDVLEILKEEFRLAMALSGCQNVKVI-DKTLV 382 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGC-CGGGB
T ss_pred cChHHHHHHHHHHHHHHHHHHHHhCCCcHHHH-hhhhh
Confidence 23578999999999999999999999999997 44444
No 11
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.79 E-value=1.1e-18 Score=204.97 Aligned_cols=313 Identities=18% Similarity=0.142 Sum_probs=199.4
Q ss_pred HHHHHHHHHHhcC-ChHHHHHHHHHhhcccCccccc----c--ccccccCCCCCCCCCCCcccc-----cccceeeCCCC
Q psy12805 323 VSIANLQEAASNN-NKNAYDRFRESNMESVKYSTLR----G--QLDFVTHDKPVDISEVEPAAE-----IVKRFATGAMS 390 (1429)
Q Consensus 323 ~~~~~l~~a~~~~-~~~~~~~~~~~~~~~~~~~~lr----~--~l~~~~~~~~i~~~~v~~~~~-----i~~pf~i~aMS 390 (1429)
..+..+++.+|.. +...|.-|.--..+ ..|+| . -+.|++. .-.+.+++++.++ +..||++++|+
T Consensus 14 ~~~~d~~~~A~~~l~~~~~~y~~~ga~~---~~t~~~N~~~f~~i~l~pr-~L~~~~~~d~st~i~G~~l~~Pi~iAPma 89 (368)
T 2nli_A 14 VNTYDLEEEASKVVPHGGFNYIAGASGD---EWTKRANDRAWKHKLLYPR-LAQDVEAPDTSTEILGHKIKAPFIMAPIA 89 (368)
T ss_dssp SCSHHHHHHHHTTSCHHHHHHHHCCSBT---SHHHHHHHHGGGGEEECCC-CCCCCSCCCCCEEETTEEESSSEEECCCS
T ss_pred CCHHHHHHHHHHhCCHHHHhhcccCCCc---cHHHHHHHHHHhheeeecc-ccCCCccCCcceEECCEecCCceeecchh
Confidence 3466777777765 55566533221111 11221 1 1223322 2226677777766 45899999999
Q ss_pred Cccc-hHHHHHHHHHHHHHhCCcEEecCCCC-CccccccCCCcccccceeeccc-CCCCCChhhhcc-----ccchhhhc
Q psy12805 391 FGSI-SIEAHTTLAKAMNKIGAKSNTGEGGE-NPERYLSSGDENQRSAIKQVAS-GRFGVTSSYLAH-----ADDLQIKM 462 (1429)
Q Consensus 391 ~Gsl-S~ea~~aLA~aa~~~G~~~~tGEGg~-~~~~~~~~~~~~~~~~I~Q~as-grfGv~~~~L~~-----a~~ieIk~ 462 (1429)
++.+ .++...++|++|.+.|+.+++||... ..++..... .......|+.. .....+.+.+.. ++++.|.+
T Consensus 90 ~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~--~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~ 167 (368)
T 2nli_A 90 AHGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGL--NGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTA 167 (368)
T ss_dssp CGGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHH--TTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEES
T ss_pred hccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhC--CCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 7764 46667999999999999999999874 333321100 01123456421 222222333332 45555655
Q ss_pred c---cCCCCCC---CCCcccc-cchHHHHhccCCCCcccc--ccCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccc
Q psy12805 463 A---QGAKPGE---GGELPGY-KVTKDIASTRHSVPGVGL--ISPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSE 533 (1429)
Q Consensus 463 g---QGAKpG~---GG~lpg~-KV~~~iA~~r~~~pg~~L--isP~~h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e 533 (1429)
+ +|.++-. +-++|.. ++... ..+....|+.+ +++..++++ ++++ |+.+|+.+ +.||+||.+
T Consensus 168 d~p~~g~r~~d~~~~~~~p~~~~~~~~--~~~~~~~g~~l~~~~~~~d~~~-~~~~----i~~lr~~~-~~PvivK~v-- 237 (368)
T 2nli_A 168 DSTVSGNRDRDVKNKFVYPFGMPIVQR--YLRGTAEGMSLNNIYGASKQKI-SPRD----IEEIAGHS-GLPVFVKGI-- 237 (368)
T ss_dssp BCC---CBC--------CCSCCHHHHH--HHTTSGGGC-----CTTBCSBC-CHHH----HHHHHHHS-SSCEEEEEE--
T ss_pred CCCcccchhHHHhhcccCcchhhhhhc--ccccCCCCchHHhhhhccCchh-hHHH----HHHHHHHc-CCCEEEEcC--
Confidence 4 2222100 1112311 11100 01112234443 455444444 4443 67777776 789999954
Q ss_pred cChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHH
Q psy12805 534 VGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAA 613 (1429)
Q Consensus 534 ~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAl 613 (1429)
-....|..+.++|+|+|+|+|++|. ..++|.|+...|.++.+.+ +++++||++|||+++.|++|++
T Consensus 238 -~~~e~a~~a~~~Gad~I~vs~~ggr--------~~~~g~~~~~~l~~v~~~v-----~~~ipVia~GGI~~g~D~~kal 303 (368)
T 2nli_A 238 -QHPEDADMAIKRGASGIWVSNHGAR--------QLYEAPGSFDTLPAIAERV-----NKRVPIVFDSGVRRGEHVAKAL 303 (368)
T ss_dssp -CSHHHHHHHHHTTCSEEEECCGGGT--------SCSSCCCHHHHHHHHHHHH-----TTSSCEEECSSCCSHHHHHHHH
T ss_pred -CCHHHHHHHHHcCCCEEEEcCCCcC--------CCCCCCChHHHHHHHHHHh-----CCCCeEEEECCCCCHHHHHHHH
Confidence 3445688899999999999999653 2478899999999998875 3469999999999999999999
Q ss_pred HhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhc
Q psy12805 614 LLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLV 692 (1429)
Q Consensus 614 aLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~Elv 692 (1429)
++|||+|++|+++|.++.| ++.+.|.++++.+.+||+..|..+|.++++|+.
T Consensus 304 alGAd~V~iGr~~l~~~~~---------------------------~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~ 355 (368)
T 2nli_A 304 ASGADVVALGRPVLFGLAL---------------------------GGWQGAYSVLDYFQKDLTRVMQLTGSQNVEDLK 355 (368)
T ss_dssp HTTCSEEEECHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHH
T ss_pred HcCCCEEEECHHHHHHHHh---------------------------cChHHHHHHHHHHHHHHHHHHHHhCCcCHHHhc
Confidence 9999999999988887642 235789999999999999999999999999984
No 12
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.77 E-value=3.4e-18 Score=208.42 Aligned_cols=276 Identities=19% Similarity=0.209 Sum_probs=183.2
Q ss_pred CCCCCCCcccc-----cccceeeCCCCCccch-H-HHHHHHHHHHHH--hCCcEEecCCCC-CccccccCCCccccccee
Q psy12805 369 VDISEVEPAAE-----IVKRFATGAMSFGSIS-I-EAHTTLAKAMNK--IGAKSNTGEGGE-NPERYLSSGDENQRSAIK 438 (1429)
Q Consensus 369 i~~~~v~~~~~-----i~~pf~i~aMS~GslS-~-ea~~aLA~aa~~--~G~~~~tGEGg~-~~~~~~~~~~~~~~~~I~ 438 (1429)
.+.+++++.++ +..||+|++|+++.++ + +...++|++|++ .|+.+++.|... +.+...............
T Consensus 172 ~dv~~~d~st~i~G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~ 251 (511)
T 1kbi_A 172 VDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWY 251 (511)
T ss_dssp CCCSSCBCCEEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEE
T ss_pred cCcccccCccccCCccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEE
Confidence 55667776666 4689999999998765 3 677799999999 999999988733 333321110001123345
Q ss_pred ecccCCCCCChhh----h-----ccccchhhhcc--cCCC-CC--C-CCCcccccchHHHHh-ccCCCCc-cccccCCCC
Q psy12805 439 QVASGRFGVTSSY----L-----AHADDLQIKMA--QGAK-PG--E-GGELPGYKVTKDIAS-TRHSVPG-VGLISPPPH 501 (1429)
Q Consensus 439 Q~asgrfGv~~~~----L-----~~a~~ieIk~g--QGAK-pG--~-GG~lpg~KV~~~iA~-~r~~~pg-~~LisP~~h 501 (1429)
|+. ++-+.+. + ..+++|.|.+. |..+ +- . |-.+|..++...-.. ... ..+ ..+++...+
T Consensus 252 QLy---~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~-~~g~~~~~~~~~d 327 (511)
T 1kbi_A 252 QLY---VNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEE-SQGASRALSKFID 327 (511)
T ss_dssp EEC---CCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSS-CCCGGGGCBTTBC
T ss_pred EEe---ecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccc-cccHHHHHhhccC
Confidence 663 2222221 2 23566677665 2110 00 0 001222222110000 000 000 011221112
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHH
Q psy12805 502 HDIYSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAE 581 (1429)
Q Consensus 502 ~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~e 581 (1429)
+++ ++++ |+.||+.+ +.||+||.+. ....|..+.++|+|+|+|+||+| + .-+.+.|....|.+
T Consensus 328 ~~~-~~~~----i~~lr~~~-~~PvivKgv~---~~e~A~~a~~aGad~I~vs~hgG-~-------~~d~~~~~~~~l~~ 390 (511)
T 1kbi_A 328 PSL-TWKD----IEELKKKT-KLPIVIKGVQ---RTEDVIKAAEIGVSGVVLSNHGG-R-------QLDFSRAPIEVLAE 390 (511)
T ss_dssp TTC-CHHH----HHHHHHHC-SSCEEEEEEC---SHHHHHHHHHTTCSEEEECCTTT-T-------SSTTCCCHHHHHHH
T ss_pred hHh-HHHH----HHHHHHHh-CCcEEEEeCC---CHHHHHHHHHcCCCEEEEcCCCC-c-------cCCCCCchHHHHHH
Confidence 222 3443 67788776 7999999653 35668889999999999999854 3 12456788888999
Q ss_pred HHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCc
Q psy12805 582 THQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGK 661 (1429)
Q Consensus 582 v~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~ 661 (1429)
+.+.+...+++.+++||++|||+|+.|++||+++|||+|++|+++|.+++| ++
T Consensus 391 v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~~~~~---------------------------~G 443 (511)
T 1kbi_A 391 TMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSC---------------------------YG 443 (511)
T ss_dssp HHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHH---------------------------HH
T ss_pred HHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHh---------------------------cC
Confidence 999988778888999999999999999999999999999999999987763 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCChhhhc
Q psy12805 662 PEHVINYLFMLAEEVRTHMAKLGIRKFADLV 692 (1429)
Q Consensus 662 ~e~v~ny~~~l~~eLr~iMa~mGi~sl~Elv 692 (1429)
.+.+.++++.+.+||+.+|..+|+++++||.
T Consensus 444 ~~gv~~~l~~l~~el~~~m~~~G~~~i~el~ 474 (511)
T 1kbi_A 444 RNGVEKAIEILRDEIEMSMRLLGVTSIAELK 474 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCBGGGCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcHHHHh
Confidence 5788999999999999999999999999983
No 13
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.76 E-value=4e-18 Score=205.22 Aligned_cols=184 Identities=18% Similarity=0.184 Sum_probs=151.1
Q ss_pred ceEEEccCCCCCcCC----ccCccchHHHHhhcc-CCCceEEEccccccccHHHHHHhCCCCc------cccccccchhh
Q psy12805 1210 GFIKYSRETAPYRPA----EKRLKDWDEIYATQH-VRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLI 1278 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~----~~rv~D~~el~~l~~-~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lv 1278 (1429)
.++.+|||+.|..|+ ..++.++++++++.. .|++++|+|+|.++||++..+++.|++| ..++|.++.
T Consensus 133 d~lViATGs~p~~p~gi~~~~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~-- 210 (464)
T 2eq6_A 133 KSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDP-- 210 (464)
T ss_dssp EEEEECCCEEECCBTTBCCSSSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCH--
T ss_pred CEEEEcCCCCCCCCCCCCCCCcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCH--
Confidence 347899999998774 225789999988876 7999999999999999999999999998 455565555
Q ss_pred ccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEe-C--CCeeEEEecEEEEeccccCchhhh-hhccCcc
Q psy12805 1279 YHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEV-P--NSEKIFKCDLVLLAMGFLGPERYI-ANELDLT 1352 (1429)
Q Consensus 1279 f~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~-~--gse~~ieaDlVLlAiG~~pp~~~L-le~lGLe 1352 (1429)
++.+.+.+.+++.| +..+.++.+++.. ++.+..... + |+.++++||.||+|+|++|+...+ ++.+|++
T Consensus 211 ---~~~~~l~~~l~~~gV~i~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~ 284 (464)
T 2eq6_A 211 ---ETAALLRRALEKEGIRVRTKTKAVGYEKK---KDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVK 284 (464)
T ss_dssp ---HHHHHHHHHHHHTTCEEECSEEEEEEEEE---TTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCC
T ss_pred ---HHHHHHHHHHHhcCCEEEcCCEEEEEEEe---CCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCce
Confidence 88999999999988 5668888888653 233333322 4 544589999999999999654444 7889999
Q ss_pred ccCCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1353 LDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1353 ld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
++++|+|.||+ +++||.|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 285 ~~~~G~i~vd~-~~~t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 285 VDERGFIRVNA-RMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp BCTTSCBCCCT-TCBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTT
T ss_pred ecCCCCEEECC-CcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcC
Confidence 98899999997 89999999999999999999999999999999999963
No 14
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.75 E-value=4.3e-18 Score=204.51 Aligned_cols=183 Identities=15% Similarity=0.169 Sum_probs=150.3
Q ss_pred ceEEEccCCCCCcCC----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhhc
Q psy12805 1210 GFIKYSRETAPYRPA----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLIY 1279 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lvf 1279 (1429)
.++.+|||+.|..|+ ..++.++++++++...|++++|+|+|.++||++..++..|++| .+++|.+++
T Consensus 136 d~lViAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~--- 212 (464)
T 2a8x_A 136 DNAIIATGSSTRLVPGTSLSANVVTYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDA--- 212 (464)
T ss_dssp EEEEECCCEEECCCTTCCCBTTEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCH---
T ss_pred CEEEECCCCCCCCCCCCCCCceEEecHHHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCH---
Confidence 347899999887763 2237788999888778999999999999999999999999998 456666555
Q ss_pred cchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEe-CCCeeEEEecEEEEeccccCchhhh-hhccCccccC
Q psy12805 1280 HNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEV-PNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDP 1355 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~-~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~ 1355 (1429)
++.+.+.+.++++| +..+.++.+++.. ++.+..... +++.++++||.||+|+|++|+...+ ++++|+++++
T Consensus 213 --~~~~~l~~~l~~~gv~i~~~~~v~~i~~~---~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~ 287 (464)
T 2a8x_A 213 --DVSKEIEKQFKKLGVTILTATKVESIADG---GSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTD 287 (464)
T ss_dssp --HHHHHHHHHHHHHTCEEECSCEEEEEEEC---SSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCT
T ss_pred --HHHHHHHHHHHHcCCEEEeCcEEEEEEEc---CCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCC
Confidence 88999999999888 5678888888652 223333322 4545689999999999999544333 7889999998
Q ss_pred CCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHH
Q psy12805 1356 RSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1356 ~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+|+|.||+ +++||.|+|||+|||+..+.+++.|+.||+.||.+|.
T Consensus 288 ~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 332 (464)
T 2a8x_A 288 RKAIGVDD-YMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIA 332 (464)
T ss_dssp TSSBCCCT-TSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHH
T ss_pred CCCEeECc-CCccCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhc
Confidence 89999997 8999999999999999989999999999999999996
No 15
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.75 E-value=6.6e-18 Score=204.08 Aligned_cols=184 Identities=16% Similarity=0.160 Sum_probs=150.4
Q ss_pred ceEEEccCCCCCcC-Cc---cCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhhc
Q psy12805 1210 GFIKYSRETAPYRP-AE---KRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLIY 1279 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p-~~---~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lvf 1279 (1429)
.++.+|||+.|..| +. ....++++++.+...|++++|+|+|.++||++..++.+|++| .+++|.+++
T Consensus 150 d~lviAtGs~p~~p~~i~g~~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~--- 226 (479)
T 2hqm_A 150 NHILVATGGKAIFPENIPGFELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDE--- 226 (479)
T ss_dssp EEEEECCCEEECCCTTSTTGGGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCH---
T ss_pred CEEEEcCCCCCCCCCCCCCcccccchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccccCH---
Confidence 34789999998877 32 235678899988888999999999999999999999999998 455666665
Q ss_pred cchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-hhccCccccCC
Q psy12805 1280 HNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDPR 1356 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~~ 1356 (1429)
++.+.+.+.|++.| +.++.++.+++.. +++....+...+++++++||.||+|+|++|+. .| ++.+|++++++
T Consensus 227 --~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~ 301 (479)
T 2hqm_A 227 --CIQNTITDHYVKEGINVHKLSKIVKVEKN--VETDKLKIHMNDSKSIDDVDELIWTIGRKSHL-GMGSENVGIKLNSH 301 (479)
T ss_dssp --HHHHHHHHHHHHHTCEEECSCCEEEEEEC--C-CCCEEEEETTSCEEEEESEEEECSCEEECC-CSSGGGGTCCBCTT
T ss_pred --HHHHHHHHHHHhCCeEEEeCCEEEEEEEc--CCCcEEEEEECCCcEEEEcCEEEECCCCCCcc-ccChhhcCceECCC
Confidence 88999999999888 5678888888652 23311223333331579999999999999655 77 89999999999
Q ss_pred CCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1357 SNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1357 G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
|+|.||+ +++||.|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 302 G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 302 DQIIADE-YQNTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp SCBCCCT-TCBCSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHS
T ss_pred CCEeECC-CCccCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcC
Confidence 9999997 78999999999999998889999999999999999863
No 16
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.75 E-value=8.2e-18 Score=202.78 Aligned_cols=185 Identities=19% Similarity=0.161 Sum_probs=152.1
Q ss_pred ceEEEccCCCCCcC---Cc---cCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchh
Q psy12805 1210 GFIKYSRETAPYRP---AE---KRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDL 1277 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p---~~---~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~l 1277 (1429)
.++.+|||+.|..| +. ....++++++.+...|++++|+|+|+++||++..++.+|++| .++++.++.
T Consensus 150 d~lviAtG~~p~~p~~~~i~G~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~- 228 (478)
T 3dk9_A 150 PHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDS- 228 (478)
T ss_dssp SCEEECCCEEECCCCTTTSTTGGGSBCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCH-
T ss_pred eEEEEccCCCCCCCCcCCCCCCceeEchHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCH-
Confidence 34889999998877 32 235788999998888999999999999999999999999998 445666665
Q ss_pred hccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCC-ceEEEEeC---CC--eeEEEecEEEEeccccCchhhh-hhc
Q psy12805 1278 IYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATG-RWKMDEVP---NS--EKIFKCDLVLLAMGFLGPERYI-ANE 1348 (1429)
Q Consensus 1278 vf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G-~~~~v~~~---gs--e~~ieaDlVLlAiG~~pp~~~L-le~ 1348 (1429)
++.+.+.+.|+++| +..+..+.+++.. .++ .+.....+ ++ .+++++|.||+|+|++|+...| ++.
T Consensus 229 ----~~~~~~~~~l~~~gv~i~~~~~v~~i~~~--~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~ 302 (478)
T 3dk9_A 229 ----MISTNCTEELENAGVEVLKFSQVKEVKKT--LSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNK 302 (478)
T ss_dssp ----HHHHHHHHHHHHTTCEEETTEEEEEEEEC--SSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGG
T ss_pred ----HHHHHHHHHHHHCCCEEEeCCEEEEEEEc--CCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchh
Confidence 88999999999988 5667888888642 344 23322222 22 2689999999999999665557 899
Q ss_pred cCccccCCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1349 LDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1349 lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
+|++++++|+|.||+ +++||+|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 303 ~g~~~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 303 LGIQTDDKGHIIVDE-FQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp GTCCBCTTCCBCCCT-TCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHS
T ss_pred cCCeeCCCCCEeeCC-CcccCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcC
Confidence 999999999999997 89999999999999998999999999999999999864
No 17
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.75 E-value=7e-18 Score=202.84 Aligned_cols=184 Identities=17% Similarity=0.201 Sum_probs=149.4
Q ss_pred ceEEEccCCCCCcCC-----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhh
Q psy12805 1210 GFIKYSRETAPYRPA-----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLI 1278 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~-----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lv 1278 (1429)
.++.+|||+.|..|+ ...+.++++++++...|++++|+|+|.++||++..++..|++| ..++|.+++
T Consensus 138 d~lviAtG~~p~~p~~~g~~~~~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~-- 215 (468)
T 2qae_A 138 KKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDE-- 215 (468)
T ss_dssp EEEEECCCEEECCBTTBCCCSSSEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCH--
T ss_pred CEEEECCCCCcCCCCCCCCCcCceechHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCH--
Confidence 347899999887763 2357889999988778999999999999999999999999998 456666555
Q ss_pred ccchHHHHHHHHH-HhCC--CCCCcEEEEEEEeecCCCceEEEEe--CCCeeEEEecEEEEeccccCchhhh-hhccCcc
Q psy12805 1279 YHNNWSEALNQLL-QTNN--FPAGIKTVKVEWTKDATGRWKMDEV--PNSEKIFKCDLVLLAMGFLGPERYI-ANELDLT 1352 (1429)
Q Consensus 1279 f~~e~~~al~~~L-e~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~--~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLe 1352 (1429)
++.+.+.+.+ +++| +.++.++.+++.. ++.+..... +|+.++++||.||+|+|++|+...+ ++.+|++
T Consensus 216 ---~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~---~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~ 289 (468)
T 2qae_A 216 ---DVTNALVGALAKNEKMKFMTSTKVVGGTNN---GDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVA 289 (468)
T ss_dssp ---HHHHHHHHHHHHHTCCEEECSCEEEEEEEC---SSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCC
T ss_pred ---HHHHHHHHHHhhcCCcEEEeCCEEEEEEEc---CCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCc
Confidence 8899999999 8888 5678888888652 223333322 3444689999999999999544333 7889999
Q ss_pred ccCCCCEEecCCCCccCCCCEEEeCCCCC-CCCcHHHHHHHHHHHHHHHHH
Q psy12805 1353 LDPRSNYSTVEKTYLTTVPRVYAAGDCRR-GQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1353 ld~~G~I~VD~~~~~TSvPgVFAAGD~a~-g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
++++|+|.||+ +++|+.|+|||+|||+. .+.+++.|+.||+.||.+|..
T Consensus 290 ~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 290 KNERGFVKIGD-HFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp BCTTSCBCCCT-TSBCSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCEeECC-CcccCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcC
Confidence 99899999997 89999999999999999 889999999999999999963
No 18
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.75 E-value=5.5e-18 Score=204.84 Aligned_cols=184 Identities=19% Similarity=0.148 Sum_probs=150.6
Q ss_pred ceEEEccCCCCCcCC----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhhc
Q psy12805 1210 GFIKYSRETAPYRPA----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLIY 1279 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lvf 1279 (1429)
.++.+|||+.|..|+ ..++.++++++++...|++++|+|+|.++||++..++..|++| .+++|.+++
T Consensus 150 d~lViAtGs~p~~~~~i~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~--- 226 (482)
T 1ojt_A 150 KNCIIAAGSRVTKLPFIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADR--- 226 (482)
T ss_dssp EEEEECCCEEECCCSSCCCCTTEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCH---
T ss_pred CEEEECCCCCCCCCCCCCccCcEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccccCH---
Confidence 348899999888764 2257889999888778999999999999999999999999998 456666665
Q ss_pred cchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeC--CCeeEEEecEEEEeccccCchhhh-hhccCcccc
Q psy12805 1280 HNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVP--NSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLD 1354 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~--gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld 1354 (1429)
++.+.+.+.|+++| +.++.++.+++.. ++.......+ ++.++++||.||+|+|++|+...| ++.+|++++
T Consensus 227 --~~~~~l~~~l~~~gV~i~~~~~v~~i~~~---~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~ 301 (482)
T 1ojt_A 227 --DLVKVWQKQNEYRFDNIMVNTKTVAVEPK---EDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVT 301 (482)
T ss_dssp --HHHHHHHHHHGGGEEEEECSCEEEEEEEE---TTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCC
T ss_pred --HHHHHHHHHHHhcCCEEEECCEEEEEEEc---CCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeC
Confidence 88999999999888 6678888888653 2222222222 113468899999999999554444 799999999
Q ss_pred CCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1355 PRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1355 ~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
++|+|.||+ +++||.|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 302 ~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 302 DRGFIEVDK-QMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp TTSCCCCCT-TSBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEeeCC-CcccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcC
Confidence 889999997 89999999999999999899999999999999999963
No 19
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.74 E-value=7.2e-18 Score=204.10 Aligned_cols=184 Identities=16% Similarity=0.168 Sum_probs=148.3
Q ss_pred ceEEEccCCCCCcCC-c----cCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCcc-----ccccccchhhc
Q psy12805 1210 GFIKYSRETAPYRPA-E----KRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLG-----NIIPKWNDLIY 1279 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~-~----~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~-----~iLp~~d~lvf 1279 (1429)
.++.+|||+.|..|+ . ....++++++.+...|++++|+|+|+++||++..++..|++|. .+++.+++
T Consensus 149 d~lViATGs~p~~p~~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~~d~--- 225 (488)
T 3dgz_A 149 EHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGFDQ--- 225 (488)
T ss_dssp EEEEECCCEEECCCSSCBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCH---
T ss_pred CEEEEcCCCCCCCCCCCCCcccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccccCCH---
Confidence 348899999998876 3 2346888999888889999999999999999999999999983 34555554
Q ss_pred cchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeC---CCeeEEEecEEEEeccccCchhhh-hhccCccc
Q psy12805 1280 HNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVP---NSEKIFKCDLVLLAMGFLGPERYI-ANELDLTL 1353 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~---gse~~ieaDlVLlAiG~~pp~~~L-le~lGLel 1353 (1429)
++.+.+.+.|+++| +..+..+.+++.. +++.+.....+ ++..+++||.||+|+|++|+...| ++.+|+++
T Consensus 226 --~~~~~l~~~l~~~gv~~~~~~~v~~i~~~--~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~ 301 (488)
T 3dgz_A 226 --QMSSLVTEHMESHGTQFLKGCVPSHIKKL--PTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGIST 301 (488)
T ss_dssp --HHHHHHHHHHHHTTCEEEETEEEEEEEEC--TTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCB
T ss_pred --HHHHHHHHHHHHCCCEEEeCCEEEEEEEc--CCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEe
Confidence 89999999999988 4456777777542 33443333222 333468999999999999655544 78899999
Q ss_pred c-CCCCEEecCCCCccCCCCEEEeCCCC-CCCCcHHHHHHHHHHHHHHHH
Q psy12805 1354 D-PRSNYSTVEKTYLTTVPRVYAAGDCR-RGQSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1354 d-~~G~I~VD~~~~~TSvPgVFAAGD~a-~g~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+ ++|+|.||+ +++|++|+|||+|||+ ..+.+++.|+.||+.||.+|.
T Consensus 302 ~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 350 (488)
T 3dgz_A 302 NPKNQKIIVDA-QEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLF 350 (488)
T ss_dssp CSSSCCBCCCT-TSBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEeECC-CCccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHc
Confidence 9 899999997 8999999999999997 568899999999999999986
No 20
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.74 E-value=8.1e-18 Score=202.64 Aligned_cols=185 Identities=18% Similarity=0.258 Sum_probs=150.6
Q ss_pred ceEEEccCCCCCcCC-----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------ccccc-ccchh
Q psy12805 1210 GFIKYSRETAPYRPA-----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIP-KWNDL 1277 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~-----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp-~~d~l 1277 (1429)
.++.+|||+.|..|+ ...+.++++++++...|++++|+|+|.+++|++..+++.|++| ..++| .+++
T Consensus 142 d~lViAtGs~p~~p~i~g~~~~~v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~- 220 (474)
T 1zmd_A 142 KNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDM- 220 (474)
T ss_dssp EEEEECCCEEECCCTTCCCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCH-
T ss_pred CEEEECCCCCCCCCCCCCCCcCcEEcHHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCH-
Confidence 348899999988763 2347889999888778999999999999999999999999998 45556 5554
Q ss_pred hccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEe---CCCeeEEEecEEEEeccccCchhhh-hhccCc
Q psy12805 1278 IYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEV---PNSEKIFKCDLVLLAMGFLGPERYI-ANELDL 1351 (1429)
Q Consensus 1278 vf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~---~gse~~ieaDlVLlAiG~~pp~~~L-le~lGL 1351 (1429)
++.+.+.+.+++.| +.++.++.+++.. .++.+..... .++.++++||.||+|+|++|+...| ++++|+
T Consensus 221 ----~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~ 294 (474)
T 1zmd_A 221 ----EISKNFQRILQKQGFKFKLNTKVTGATKK--SDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGI 294 (474)
T ss_dssp ----HHHHHHHHHHHHTTCEEECSEEEEEEEEC--TTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTC
T ss_pred ----HHHHHHHHHHHHCCCEEEeCceEEEEEEc--CCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCC
Confidence 88999999999988 5668888888652 2232333221 3455689999999999999544433 788999
Q ss_pred cccCCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1352 TLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1352 eld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
+++++|+|.||+ +++|+.|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 295 ~~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 295 ELDPRGRIPVNT-RFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp CCCTTSCCCCCT-TCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCEEECc-CCccCCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcC
Confidence 999899999997 89999999999999999899999999999999999963
No 21
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.74 E-value=6.4e-18 Score=205.36 Aligned_cols=181 Identities=18% Similarity=0.243 Sum_probs=150.0
Q ss_pred eEEEccCCCCCcCCc---cCccchHHHHhhccCCCceEEEccccccccHHHHHHhC---CCCc------cccccccchhh
Q psy12805 1211 FIKYSRETAPYRPAE---KRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSH---GCPL------GNIIPKWNDLI 1278 (1429)
Q Consensus 1211 f~kiAtGs~P~~p~~---~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~---Gc~V------~~iLp~~d~lv 1278 (1429)
++.+|||+.|..|+. ..+.++++++++...|++++|+|+|.++||++..++.+ |++| ..++|.+++
T Consensus 158 ~lViATGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~-- 235 (495)
T 2wpf_A 158 HILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDE-- 235 (495)
T ss_dssp EEEECCCEEECCCCCTTGGGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCH--
T ss_pred EEEEeCCCCcCCCCCCCccccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCH--
Confidence 478999999987742 34678899988877899999999999999999999999 9998 456666665
Q ss_pred ccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-hhccCccccC
Q psy12805 1279 YHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDP 1355 (1429)
Q Consensus 1279 f~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~ 1355 (1429)
++.+.+.+.++++| +.++.++.+++.. .++.+... ..++ ++++||.||+|+|++|+...| ++.+|+++++
T Consensus 236 ---~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~-~~~G-~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~ 308 (495)
T 2wpf_A 236 ---TIREEVTKQLTANGIEIMTNENPAKVSLN--TDGSKHVT-FESG-KTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTP 308 (495)
T ss_dssp ---HHHHHHHHHHHHTTCEEEESCCEEEEEEC--TTSCEEEE-ETTS-CEEEESEEEECSCEEECCGGGTGGGTTCCBCT
T ss_pred ---HHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCceEEEE-ECCC-cEEEcCEEEECCCCcccccccchhhcCccCCC
Confidence 88999999999998 4567788888642 22333333 3333 379999999999999655546 7899999999
Q ss_pred CCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHH
Q psy12805 1356 RSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1356 ~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+|+|.||+ +++|+.|+|||+|||+..+.+++.|+.||+.||.+|.
T Consensus 309 ~G~i~Vd~-~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~ 353 (495)
T 2wpf_A 309 KGGVQVDE-FSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVF 353 (495)
T ss_dssp TSSBCCCT-TCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEECC-CCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhc
Confidence 99999997 8999999999999999888999999999999999986
No 22
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.74 E-value=7e-18 Score=204.69 Aligned_cols=181 Identities=16% Similarity=0.158 Sum_probs=150.9
Q ss_pred eEEEccCCCCCcCCc---cCccchHHHHhhccCCCceEEEccccccccHHHHHHhC---CCCc------cccccccchhh
Q psy12805 1211 FIKYSRETAPYRPAE---KRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSH---GCPL------GNIIPKWNDLI 1278 (1429)
Q Consensus 1211 f~kiAtGs~P~~p~~---~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~---Gc~V------~~iLp~~d~lv 1278 (1429)
++.+|||+.|..|+. ..+.++++++.+...|++++|+|+|+++||++..+..+ |++| ..++|.+++
T Consensus 154 ~lviAtGs~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~-- 231 (490)
T 1fec_A 154 YILLATGSWPQHLGIEGDDLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDS-- 231 (490)
T ss_dssp EEEECCCEEECCCCSBTGGGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCH--
T ss_pred EEEEeCCCCCCCCCCCCccceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCH--
Confidence 478999999987742 34678899998887899999999999999999999999 9998 456666665
Q ss_pred ccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-hhccCccccC
Q psy12805 1279 YHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDP 1355 (1429)
Q Consensus 1279 f~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~ 1355 (1429)
++.+.+.+.++++| +.++.++.+++.. +++.+... ..++ ++++||.||+|+|++|+...| ++.+|+++++
T Consensus 232 ---~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~-~~~G-~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~ 304 (490)
T 1fec_A 232 ---ELRKQLTEQLRANGINVRTHENPAKVTKN--ADGTRHVV-FESG-AEADYDVVMLAIGRVPRSQTLQLEKAGVEVAK 304 (490)
T ss_dssp ---HHHHHHHHHHHHTTEEEEETCCEEEEEEC--TTSCEEEE-ETTS-CEEEESEEEECSCEEESCTTSCGGGGTCCBCT
T ss_pred ---HHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEE-ECCC-cEEEcCEEEEccCCCcCccccCchhcCccCCC
Confidence 88999999999998 5668888888652 22333333 3333 379999999999999655546 8999999999
Q ss_pred CCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHH
Q psy12805 1356 RSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1356 ~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+|+|.||+ +++|+.|+|||+|||+..+.+++.|+.||+.||.+|.
T Consensus 305 ~G~I~Vd~-~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~ 349 (490)
T 1fec_A 305 NGAIKVDA-YSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVF 349 (490)
T ss_dssp TSCBCCCT-TCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEECC-CCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhc
Confidence 99999997 8999999999999999888999999999999999986
No 23
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.74 E-value=9.8e-18 Score=201.84 Aligned_cols=184 Identities=21% Similarity=0.226 Sum_probs=152.4
Q ss_pred ceEEEccCCCCCcCC-----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhh
Q psy12805 1210 GFIKYSRETAPYRPA-----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLI 1278 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~-----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lv 1278 (1429)
.++.+|||+.|..|+ ..++.+++++..+...|++++|+|+|+++||++..+...|++| ..++|.++.
T Consensus 144 d~lvlAtG~~p~~~~~~~~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~-- 221 (476)
T 3lad_A 144 ENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDE-- 221 (476)
T ss_dssp SCEEECCCEEECCCTTSCCCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCH--
T ss_pred CEEEEcCCCCCCCCCCCCCCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCH--
Confidence 348899999987653 3467888999888888999999999999999999999999988 455666555
Q ss_pred ccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCC-eeEEEecEEEEeccccCchhhh-hhccCcccc
Q psy12805 1279 YHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNS-EKIFKCDLVLLAMGFLGPERYI-ANELDLTLD 1354 (1429)
Q Consensus 1279 f~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gs-e~~ieaDlVLlAiG~~pp~~~L-le~lGLeld 1354 (1429)
++.+.+.+.+++.| +..+.++.+++.. ++.......+++ .+++++|.||+|+|++|+...| ++.+|++++
T Consensus 222 ---~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~---~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~ 295 (476)
T 3lad_A 222 ---QVAKEAQKILTKQGLKILLGARVTGTEVK---NKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLD 295 (476)
T ss_dssp ---HHHHHHHHHHHHTTEEEEETCEEEEEEEC---SSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBC
T ss_pred ---HHHHHHHHHHHhCCCEEEECCEEEEEEEc---CCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCcccc
Confidence 89999999999988 5567888888652 333333333332 3689999999999999665555 889999999
Q ss_pred CCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1355 PRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1355 ~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
++|+|.||+ +++|++|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 296 ~~G~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 296 ERGFIYVDD-YCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp TTSCBCCCT-TSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEeeCC-CcccCCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcC
Confidence 999999997 89999999999999999899999999999999999964
No 24
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.74 E-value=6.3e-18 Score=203.00 Aligned_cols=184 Identities=18% Similarity=0.211 Sum_probs=149.8
Q ss_pred ceEEEccCCCCCcCC-----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhh
Q psy12805 1210 GFIKYSRETAPYRPA-----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLI 1278 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~-----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lv 1278 (1429)
.++.+|||+.|..|+ ..++.++++++++...|++++|+|+|.++||++..++..|++| ..++|.++.
T Consensus 141 d~lIiAtGs~p~~p~~~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~-- 218 (470)
T 1dxl_A 141 KHIIIATGSDVKSLPGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDA-- 218 (470)
T ss_dssp SEEEECCCEEECCBTTBCCCSSSEECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCH--
T ss_pred CEEEECCCCCCCCCCCCCCCcccEEeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccH--
Confidence 458899999988763 2357888999888778999999999999999999999999988 455565555
Q ss_pred ccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEe---CCCeeEEEecEEEEeccccCchhhh-hhccCcc
Q psy12805 1279 YHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEV---PNSEKIFKCDLVLLAMGFLGPERYI-ANELDLT 1352 (1429)
Q Consensus 1279 f~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~---~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLe 1352 (1429)
++.+.+.+.+++.| +..+.++.+++.. ++.+..... +++.+++++|.||+|+|++|+...+ ++++|++
T Consensus 219 ---~~~~~l~~~l~~~gv~i~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~ 292 (470)
T 1dxl_A 219 ---EIRKQFQRSLEKQGMKFKLKTKVVGVDTS---GDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVE 292 (470)
T ss_dssp ---HHHHHHHHHHHHSSCCEECSEEEEEEECS---SSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCC
T ss_pred ---HHHHHHHHHHHHcCCEEEeCCEEEEEEEc---CCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCc
Confidence 88999999999988 4567788888542 223332222 3445689999999999999544333 7899999
Q ss_pred ccCCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1353 LDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1353 ld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
++++|+|.||+ +++|+.|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 293 ~~~~G~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 293 TDKLGRILVNE-RFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp BCSSSCBCCCT-TCBCSSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCEeECc-CCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 99889999997 89999999999999999889999999999999999963
No 25
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.74 E-value=1.2e-17 Score=202.79 Aligned_cols=186 Identities=16% Similarity=0.188 Sum_probs=153.2
Q ss_pred eEEEccCCCCCcCC-----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhhc
Q psy12805 1211 FIKYSRETAPYRPA-----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLIY 1279 (1429)
Q Consensus 1211 f~kiAtGs~P~~p~-----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lvf 1279 (1429)
++.+|||+.|..|+ ...+.++++++.+...|++++|+|+|.++||++..+++.|++| .++++.+++
T Consensus 139 ~lViATGs~p~~p~~~~~~~~~v~t~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~--- 215 (492)
T 3ic9_A 139 RIVIATGSRPNYPEFLAAAGSRLLTNDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDE--- 215 (492)
T ss_dssp EEEECCCEECCCCHHHHTTGGGEECHHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCH---
T ss_pred EEEEccCCCCcCCCCCCccCCcEEcHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCH---
Confidence 47799999999884 4567899999998888999999999999999999999999998 455666655
Q ss_pred cchHHHHHHHHHHhC-CCCCCcEEEEEEEeecCCCceEEEEe--CCCeeEEEecEEEEeccccCchhhh-hhccCccccC
Q psy12805 1280 HNNWSEALNQLLQTN-NFPAGIKTVKVEWTKDATGRWKMDEV--PNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDP 1355 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~~-G~~~gv~v~~Ve~~k~~~G~~~~v~~--~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~ 1355 (1429)
++.+.+.+.|+++ .+..+..+.+++.. ++.+..... +|+.++++||.||+|+|++|+...| ++.+|+++++
T Consensus 216 --~~~~~l~~~l~~~V~i~~~~~v~~i~~~---~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~ 290 (492)
T 3ic9_A 216 --EMKRYAEKTFNEEFYFDAKARVISTIEK---EDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDK 290 (492)
T ss_dssp --HHHHHHHHHHHTTSEEETTCEEEEEEEC---SSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCT
T ss_pred --HHHHHHHHHHhhCcEEEECCEEEEEEEc---CCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECC
Confidence 8888999888775 24567888888652 334333332 4544789999999999999554444 8999999999
Q ss_pred CCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q psy12805 1356 RSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFL 1404 (1429)
Q Consensus 1356 ~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L 1404 (1429)
+|+|.||+.+++|+.|+|||+|||+..+++++.|+.||+.||.+|..+.
T Consensus 291 ~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 339 (492)
T 3ic9_A 291 KNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGAYP 339 (492)
T ss_dssp TCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 9999999338999999999999999999999999999999999998754
No 26
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.74 E-value=4.1e-18 Score=203.95 Aligned_cols=177 Identities=14% Similarity=0.140 Sum_probs=139.1
Q ss_pred cceEEEccCCCCCcCCcc--C---ccchHHHHhh-----ccCCCceEEEccccccccHHHHHHhCCCCc------ccccc
Q psy12805 1209 RGFIKYSRETAPYRPAEK--R---LKDWDEIYAT-----QHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIP 1272 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~~~--r---v~D~~el~~l-----~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp 1272 (1429)
+.++.+|||+.|..|... . +.+.++...+ ...|++++|+|+|.++||++..++++|++| .+++|
T Consensus 105 yd~lVIATGs~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~ 184 (437)
T 4eqs_A 105 YDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK 184 (437)
T ss_dssp CSEEEECCCEEECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST
T ss_pred cCEEEECCCCccccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc
Confidence 345889999999887422 1 2333333322 234889999999999999999999999998 56667
Q ss_pred ccchhhccchHHHHHHHHHHhCCC--CCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccC
Q psy12805 1273 KWNDLIYHNNWSEALNQLLQTNNF--PAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELD 1350 (1429)
Q Consensus 1273 ~~d~lvf~~e~~~al~~~Le~~G~--~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lG 1350 (1429)
.++. ++.+.+.+.++++|+ ..+.++.+++. .. +.+.+ .++++||.||+|+|++ |+..+++.+|
T Consensus 185 ~~d~-----~~~~~~~~~l~~~gV~i~~~~~v~~~~~-----~~---v~~~~-g~~~~~D~vl~a~G~~-Pn~~~~~~~g 249 (437)
T 4eqs_A 185 LMDA-----DMNQPILDELDKREIPYRLNEEINAING-----NE---ITFKS-GKVEHYDMIIEGVGTH-PNSKFIESSN 249 (437)
T ss_dssp TSCG-----GGGHHHHHHHHHTTCCEEESCCEEEEET-----TE---EEETT-SCEEECSEEEECCCEE-ESCGGGTTSS
T ss_pred cccc-----hhHHHHHHHhhccceEEEeccEEEEecC-----Ce---eeecC-CeEEeeeeEEEEecee-cCcHHHHhhh
Confidence 6666 899999999999984 45666666632 11 22333 3479999999999999 5667899999
Q ss_pred ccccCCCCEEecCCCCccCCCCEEEeCCCCCC----------CCcHHHHHHHHHHHHHHHH
Q psy12805 1351 LTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRG----------QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1351 Leld~~G~I~VD~~~~~TSvPgVFAAGD~a~g----------~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
++++++|+|.||+ +++||+|+|||+|||+.. +++++.|..||+.||.||.
T Consensus 250 l~~~~~G~I~vd~-~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~ 309 (437)
T 4eqs_A 250 IKLDRKGFIPVND-KFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIA 309 (437)
T ss_dssp CCCCTTSCEECCT-TCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHH
T ss_pred hhhccCCcEecCC-CccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHc
Confidence 9999999999997 899999999999999753 3578999999999999985
No 27
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.74 E-value=9.8e-18 Score=201.08 Aligned_cols=183 Identities=15% Similarity=0.194 Sum_probs=149.7
Q ss_pred ceEEEccCCCCCcCC---ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhhcc
Q psy12805 1210 GFIKYSRETAPYRPA---EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLIYH 1280 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~---~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lvf~ 1280 (1429)
.++.+|||+.|..|+ ...+.++++++++...|++++|+|+|.++||++..+++.|++| ..+++.++.
T Consensus 133 d~lviAtGs~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~---- 208 (450)
T 1ges_A 133 DHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDP---- 208 (450)
T ss_dssp EEEEECCCEEECCCCSTTGGGSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCH----
T ss_pred CEEEECCCCCCCCCCCCCccceecHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhH----
Confidence 347799999988774 2346788899888778999999999999999999999999998 345555554
Q ss_pred chHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-hhccCccccCCC
Q psy12805 1281 NNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDPRS 1357 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~~G 1357 (1429)
++.+.+.+.+++.| +.++.++.+++.. +++.+... ..++ ++++||.||+|+|++|+...| ++.+|++++++|
T Consensus 209 -~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~-~~~g-~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g 283 (450)
T 1ges_A 209 -MISETLVEVMNAEGPQLHTNAIPKAVVKN--TDGSLTLE-LEDG-RSETVDCLIWAIGREPANDNINLEAAGVKTNEKG 283 (450)
T ss_dssp -HHHHHHHHHHHHHSCEEECSCCEEEEEEC--TTSCEEEE-ETTS-CEEEESEEEECSCEEESCTTSCHHHHTCCBCTTS
T ss_pred -HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCcEEEEE-ECCC-cEEEcCEEEECCCCCcCCCCCCchhcCceECCCC
Confidence 88899999998888 5668888888652 23333333 3333 379999999999999655446 788999999999
Q ss_pred CEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1358 NYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1358 ~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
+|.||+ +++||.|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 284 ~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 284 YIVVDK-YQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp CBCCCT-TSBCSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHT
T ss_pred CEeECC-CCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 999997 78999999999999998889999999999999999863
No 28
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.74 E-value=1.3e-17 Score=200.99 Aligned_cols=186 Identities=16% Similarity=0.169 Sum_probs=150.3
Q ss_pred ceEEEccCCCCCcCC-----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhh
Q psy12805 1210 GFIKYSRETAPYRPA-----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLI 1278 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~-----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lv 1278 (1429)
.++.+|||+.|..++ ...+.++++++.+...|++++|+|+|.++||++..++..|++| ..++|.++.
T Consensus 147 d~lViAtGs~p~~~~g~~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~-- 224 (478)
T 1v59_A 147 KNIIVATGSEVTPFPGIEIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDG-- 224 (478)
T ss_dssp EEEEECCCEEECCCTTCCCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCH--
T ss_pred CEEEECcCCCCCCCCCCCCCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCH--
Confidence 348899999885432 1257888999888778999999999999999999999999998 456666655
Q ss_pred ccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEe---CCCeeEEEecEEEEeccccCchhh-hhhccCcc
Q psy12805 1279 YHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEV---PNSEKIFKCDLVLLAMGFLGPERY-IANELDLT 1352 (1429)
Q Consensus 1279 f~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~---~gse~~ieaDlVLlAiG~~pp~~~-Lle~lGLe 1352 (1429)
++.+.+.+.+++.| +.++.++.+++... .++.+..... +++.++++||.||+|+|++|+... +++.+|++
T Consensus 225 ---~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~ 300 (478)
T 1v59_A 225 ---EVAKATQKFLKKQGLDFKLSTKVISAKRND-DKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLE 300 (478)
T ss_dssp ---HHHHHHHHHHHHTTCEEECSEEEEEEEEET-TTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCC
T ss_pred ---HHHHHHHHHHHHCCCEEEeCCEEEEEEEec-CCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCce
Confidence 88999999999988 56678888885420 1222322222 234568999999999999955443 58999999
Q ss_pred ccCCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1353 LDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1353 ld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
++++|+|.||+ +++|+.|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 301 ~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 301 VDKRGRLVIDD-QFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp BCTTSCBCCCT-TSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCEeECc-CCccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 99899999997 89999999999999999899999999999999999975
No 29
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.73 E-value=1.2e-17 Score=194.00 Aligned_cols=172 Identities=14% Similarity=0.118 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCC--hHHHHHHHHH
Q psy12805 507 IEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLP--WELGVAETHQ 584 (1429)
Q Consensus 507 iedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP--~~laL~ev~q 584 (1429)
.....+.|+++|+.++..||. |- .+.....|..+.++|||.|++++++|..-.. .....+|.| +...|.++.+
T Consensus 133 ~~~~~~~i~~lr~~~~~~~vi-~G--~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~--~~~~~~g~~g~~~~~l~~v~~ 207 (336)
T 1ypf_A 133 SNAVINMIQHIKKHLPESFVI-AG--NVGTPEAVRELENAGADATKVGIGPGKVCIT--KIKTGFGTGGWQLAALRWCAK 207 (336)
T ss_dssp SHHHHHHHHHHHHHCTTSEEE-EE--EECSHHHHHHHHHHTCSEEEECSSCSTTCHH--HHHHSCSSTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCEEE-EC--CcCCHHHHHHHHHcCCCEEEEecCCCceeec--ccccCcCCchhHHHHHHHHHH
Confidence 356778899999998655554 42 1223467888999999999999985532100 112367788 7778888776
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH--------------------HHhccccccccccCCCC
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL--------------------ITMGCTMMRKCHLNTCP 644 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L--------------------~algc~~~r~c~~~~cP 644 (1429)
.+ +++||++|||+|+.|++||+++||++|++|+++| .+++|...+ +..+||
T Consensus 208 ~~-------~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~~~~~~--g~~~~~ 278 (336)
T 1ypf_A 208 AA-------SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSASEFQK--GEKKNV 278 (336)
T ss_dssp TC-------SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC-------------------------CT
T ss_pred Hc-------CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeecccchhhc--cCcccc
Confidence 43 6999999999999999999999999999999988 566655443 345799
Q ss_pred ccceecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCcccccc
Q psy12805 645 VGIATQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKPR 701 (1429)
Q Consensus 645 ~giatqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~~ 701 (1429)
.|+.++.|. .+ .|.++++.+.+||+..|+.+|+++++|| .+++++...
T Consensus 279 ~g~~~~~~~-----~g---~~~~~~~~l~~el~~~m~~~G~~~i~el-~~~~~~~~~ 326 (336)
T 1ypf_A 279 EGKKMFVEH-----KG---SLEDTLIEMEQDLQSSISYAGGTKLDSI-RTVDYVVVK 326 (336)
T ss_dssp TSCCSSSSC-----CC---CHHHHHHHHHHHHHHHHHHTTSSBGGGG-GGCCEEECS
T ss_pred ccceeeecc-----cc---cHHHHHHHHHHHHHHHHHHhCcccHHHh-CcCCEEEEc
Confidence 999998763 23 7899999999999999999999999998 667776653
No 30
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.73 E-value=3.3e-17 Score=192.83 Aligned_cols=268 Identities=18% Similarity=0.211 Sum_probs=176.6
Q ss_pred CCCCCCcccc-----cccceeeCCCCCccc-hHHHHHHHHHHHHHhCCcEEecCCCCC-ccccccCCCcccccceeecc-
Q psy12805 370 DISEVEPAAE-----IVKRFATGAMSFGSI-SIEAHTTLAKAMNKIGAKSNTGEGGEN-PERYLSSGDENQRSAIKQVA- 441 (1429)
Q Consensus 370 ~~~~v~~~~~-----i~~pf~i~aMS~Gsl-S~ea~~aLA~aa~~~G~~~~tGEGg~~-~~~~~~~~~~~~~~~I~Q~a- 441 (1429)
+.+++++.++ +..||++++|+++.+ +++.+.++|++|++.|+.+++|+.... .++..... . .....|+.
T Consensus 55 ~~~~~d~~t~i~G~~~~~Pi~iAPmg~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~-~--~~~~~QLy~ 131 (370)
T 1gox_A 55 DVTNIDMTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTG-P--GIRFFQLYV 131 (370)
T ss_dssp CCSCCBCCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTC-C--CCEEEEECC
T ss_pred CCCCCCCceEECCcccCCceeEcccchhhhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhc-C--CCceEEEec
Confidence 4456665555 468999999977776 799999999999999999999987643 23321110 1 22344542
Q ss_pred cCCCCCChhhhc-----cccchhhhcccCCCCCCCCC---------ccccc----c-hHHHHhcc-CCCCc-cccccCCC
Q psy12805 442 SGRFGVTSSYLA-----HADDLQIKMAQGAKPGEGGE---------LPGYK----V-TKDIASTR-HSVPG-VGLISPPP 500 (1429)
Q Consensus 442 sgrfGv~~~~L~-----~a~~ieIk~gQGAKpG~GG~---------lpg~K----V-~~~iA~~r-~~~pg-~~LisP~~ 500 (1429)
......+.+.+. .+++|.|.+.. |..|.. +|... + ....+... ...+. ..+++|..
T Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~it~d~---p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~ 208 (370)
T 1gox_A 132 YKDRNVVAQLVRRAERAGFKAIALTVDT---PRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQI 208 (370)
T ss_dssp BSSHHHHHHHHHHHHHTTCCEEEEECSC---SSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTB
T ss_pred CCCchHHHHHHHHHHHCCCCEEEEeCCC---CcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhc
Confidence 111111112221 24556665542 211111 11000 0 00000000 00000 12445443
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHH
Q psy12805 501 HHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVA 580 (1429)
Q Consensus 501 h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ 580 (1429)
++++ ++++ |..+++.+ +.||+||.+. ....|..+.++|+|.|+|++++|. ..+.+.|+...+.
T Consensus 209 ~~~~-~~~~----i~~l~~~~-~~pv~vK~~~---~~e~a~~a~~~Gad~I~vs~~ggr--------~~~~~~~~~~~l~ 271 (370)
T 1gox_A 209 DRSL-SWKD----VAWLQTIT-SLPILVKGVI---TAEDARLAVQHGAAGIIVSNHGAR--------QLDYVPATIMALE 271 (370)
T ss_dssp CTTC-CHHH----HHHHHHHC-CSCEEEECCC---SHHHHHHHHHTTCSEEEECCGGGT--------SSTTCCCHHHHHH
T ss_pred Cccc-hHHH----HHHHHHHh-CCCEEEEecC---CHHHHHHHHHcCCCEEEECCCCCc--------cCCCcccHHHHHH
Confidence 4433 3443 66667666 7999999763 345678899999999999988643 2356788888898
Q ss_pred HHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCC
Q psy12805 581 ETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAG 660 (1429)
Q Consensus 581 ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g 660 (1429)
++.+.+ +.+++||++|||+++.|+.+++++||++|++|+++|.++.| +
T Consensus 272 ~v~~~~-----~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~~---------------------------~ 319 (370)
T 1gox_A 272 EVVKAA-----QGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAA---------------------------E 319 (370)
T ss_dssp HHHHHT-----TTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHH---------------------------H
T ss_pred HHHHHh-----CCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHhh---------------------------c
Confidence 888764 45799999999999999999999999999999988887642 2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCChhhhc
Q psy12805 661 KPEHVINYLFMLAEEVRTHMAKLGIRKFADLV 692 (1429)
Q Consensus 661 ~~e~v~ny~~~l~~eLr~iMa~mGi~sl~Elv 692 (1429)
+.+.|.++++.+.+||+.+|..+|+++++|+.
T Consensus 320 G~~gv~~~~~~l~~el~~~m~~~G~~~i~el~ 351 (370)
T 1gox_A 320 GEAGVKKVLQMMRDEFELTMALSGCRSLKEIS 351 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCSBTTTCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhh
Confidence 35789999999999999999999999999974
No 31
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.73 E-value=1.4e-17 Score=203.41 Aligned_cols=186 Identities=16% Similarity=0.197 Sum_probs=148.9
Q ss_pred ceEEEccCCCCCcCCc----cCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc-----cccccccchhhcc
Q psy12805 1210 GFIKYSRETAPYRPAE----KRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL-----GNIIPKWNDLIYH 1280 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~----~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V-----~~iLp~~d~lvf~ 1280 (1429)
.++.+|||+.|..|+. ..+.++++++++...|++++|+|+|+++||++..++++|++| ..+++.+++
T Consensus 175 d~lViATGs~p~~p~i~G~~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~~d~---- 250 (519)
T 3qfa_A 175 ERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQ---- 250 (519)
T ss_dssp EEEEECCCEEECCCCCTTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCH----
T ss_pred CEEEEECCCCcCCCCCCCccCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccccCCH----
Confidence 4488999999988743 235788899988888999999999999999999999999998 344555555
Q ss_pred chHHHHHHHHHHhCC--CCCCcEEEEEEEeecC-CCceEEE--EeCCCe-eEEEecEEEEeccccCchhhh-hhccCccc
Q psy12805 1281 NNWSEALNQLLQTNN--FPAGIKTVKVEWTKDA-TGRWKMD--EVPNSE-KIFKCDLVLLAMGFLGPERYI-ANELDLTL 1353 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~-~G~~~~v--~~~gse-~~ieaDlVLlAiG~~pp~~~L-le~lGLel 1353 (1429)
++.+.+.+.|++.| +..+..+.+++...+. ++.+... ..++++ .++++|.||+|+|++|+...| ++.+|+++
T Consensus 251 -~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~ 329 (519)
T 3qfa_A 251 -DMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKI 329 (519)
T ss_dssp -HHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCC
T ss_pred -HHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEE
Confidence 89999999999998 4557677777654321 2333322 223322 468999999999999655545 88999999
Q ss_pred c-CCCCEEecCCCCccCCCCEEEeCCCC-CCCCcHHHHHHHHHHHHHHHH
Q psy12805 1354 D-PRSNYSTVEKTYLTTVPRVYAAGDCR-RGQSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1354 d-~~G~I~VD~~~~~TSvPgVFAAGD~a-~g~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+ ++|+|.||+ +++||+|+|||+|||+ ..+.+++.|+.||+.||.+|.
T Consensus 330 ~~~~G~I~Vd~-~~~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~ 378 (519)
T 3qfa_A 330 NEKTGKIPVTD-EEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLY 378 (519)
T ss_dssp CTTTCCBCCCT-TSBCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEeeCC-CCccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHc
Confidence 8 689999997 8999999999999998 568899999999999999986
No 32
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.73 E-value=1.8e-17 Score=198.64 Aligned_cols=183 Identities=17% Similarity=0.216 Sum_probs=148.8
Q ss_pred ceEEEccCCCCCcCC----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhhc
Q psy12805 1210 GFIKYSRETAPYRPA----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLIY 1279 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lvf 1279 (1429)
.++.+|||+.|..|+ ...+.++++++++...|++++|+|+|.++||++..+++.|++| ..++|.++.
T Consensus 135 d~lViATGs~p~~~~~~g~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~--- 211 (455)
T 1ebd_A 135 KNAIIATGSRPIELPNFKFSNRILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEK--- 211 (455)
T ss_dssp SEEEECCCEEECCBTTBCCCSSEECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCH---
T ss_pred CEEEEecCCCCCCCCCCCccceEecHHHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCH---
Confidence 458899999988763 2236788998888777899999999999999999999999998 455665554
Q ss_pred cchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEE-eCCCeeEEEecEEEEeccccCchhhh-hhccCccccC
Q psy12805 1280 HNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDE-VPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDP 1355 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~-~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~ 1355 (1429)
++.+.+.+.+++.| +..+.++.+++.. ++.+.... .+++.+++++|.||+|+|++|+...+ ++.+|+++++
T Consensus 212 --~~~~~l~~~l~~~gv~i~~~~~v~~i~~~---~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~ 286 (455)
T 1ebd_A 212 --QMAAIIKKRLKKKGVEVVTNALAKGAEER---EDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTN 286 (455)
T ss_dssp --HHHHHHHHHHHHTTCEEEESEEEEEEEEE---TTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCT
T ss_pred --HHHHHHHHHHHHCCCEEEeCCEEEEEEEe---CCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCC
Confidence 88899999999988 4557778787642 22233222 23445689999999999999544333 7889999998
Q ss_pred CCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHH
Q psy12805 1356 RSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1356 ~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+|+|.||+ +++|+.|+|||+|||+..+.+++.|+.||+.||.+|.
T Consensus 287 ~G~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~ 331 (455)
T 1ebd_A 287 RGLIEVDQ-QCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIA 331 (455)
T ss_dssp TSCBCCCT-TCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHT
T ss_pred CCCEeeCC-CcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHc
Confidence 99999997 8999999999999999988999999999999999996
No 33
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.73 E-value=1.5e-17 Score=201.21 Aligned_cols=184 Identities=18% Similarity=0.196 Sum_probs=150.6
Q ss_pred ceEEEccCCCCCcCC-------ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccch
Q psy12805 1210 GFIKYSRETAPYRPA-------EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWND 1276 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~-------~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~ 1276 (1429)
.++.+|||+.|..++ ...+.+++++..+...|++++|+|+|.++||++..++..|++| ..+++.++.
T Consensus 160 d~lViATGs~p~~ipg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~ 239 (491)
T 3urh_A 160 KNVVIATGSDVAGIPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDG 239 (491)
T ss_dssp SEEEECCCEECCCBTTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCH
T ss_pred CEEEEccCCCCCCCCCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccCCH
Confidence 458899998875432 2356788999888888999999999999999999999999988 455666555
Q ss_pred hhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEe--C-CCeeEEEecEEEEeccccCchhhh-hhccC
Q psy12805 1277 LIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEV--P-NSEKIFKCDLVLLAMGFLGPERYI-ANELD 1350 (1429)
Q Consensus 1277 lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~--~-gse~~ieaDlVLlAiG~~pp~~~L-le~lG 1350 (1429)
++.+.+.+.+++.| +..+.++.+++.. ++.+..... . |+.++++||.||+|+|++|+...| ++.+|
T Consensus 240 -----~~~~~l~~~l~~~gV~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g 311 (491)
T 3urh_A 240 -----EVAKQLQRMLTKQGIDFKLGAKVTGAVKS---GDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAG 311 (491)
T ss_dssp -----HHHHHHHHHHHHTTCEEECSEEEEEEEEE---TTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHT
T ss_pred -----HHHHHHHHHHHhCCCEEEECCeEEEEEEe---CCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcC
Confidence 88999999999988 5567888888653 222222222 1 445689999999999999655545 88899
Q ss_pred ccccCCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1351 LTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1351 Leld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
++++++|+|.||+ +++|++|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 312 ~~~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 312 VVLDSRGRVEIDR-HFQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp CCBCTTSCBCCCT-TCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTT
T ss_pred ceECCCCCEeECC-CCCCCCCCEEEEEecCCCccchhHHHHHHHHHHHHHcC
Confidence 9999999999997 89999999999999999999999999999999999863
No 34
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.73 E-value=2.3e-17 Score=186.60 Aligned_cols=195 Identities=14% Similarity=0.127 Sum_probs=130.1
Q ss_pred cccccce--EEEccCCCCCcCCccC--------ccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCcccccccc
Q psy12805 1205 IDKTRGF--IKYSRETAPYRPAEKR--------LKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKW 1274 (1429)
Q Consensus 1205 ~~k~~gf--~kiAtGs~P~~p~~~r--------v~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~ 1274 (1429)
.++...| +.+|||+.|..|+... +............+++++|+|+|+++||++..++++|++|..+-+.
T Consensus 99 ~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~- 177 (312)
T 4gcm_A 99 GNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRR- 177 (312)
T ss_dssp SSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSS-
T ss_pred CCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecc-
Confidence 3444444 7899999998763211 1222222223345789999999999999999999999998433221
Q ss_pred chhhccchHHHHHHHHHHhCCC--CCCcEEEEEEEeecCCCceEE-EEeCCCeeEEEecEEEEeccccCchhhhhhccCc
Q psy12805 1275 NDLIYHNNWSEALNQLLQTNNF--PAGIKTVKVEWTKDATGRWKM-DEVPNSEKIFKCDLVLLAMGFLGPERYIANELDL 1351 (1429)
Q Consensus 1275 d~lvf~~e~~~al~~~Le~~G~--~~gv~v~~Ve~~k~~~G~~~~-v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGL 1351 (1429)
+.+ ... .....+.++..++ .....+..+.......+.... ....++...+++|.|++++|+. |+..+++.+++
T Consensus 178 ~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~~g~ 253 (312)
T 4gcm_A 178 DEL-RAQ--RILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMK-PLTAPFKDLGI 253 (312)
T ss_dssp SSC-CSC--HHHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEE-ESCGGGGGGTC
T ss_pred ccc-Ccc--hhHHHHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCC-cCchhHHhcce
Confidence 110 000 1112334444442 223333333222111111111 1234556789999999999999 66678888888
Q ss_pred cccCCCCEEecCCCCccCCCCEEEeCCCCC-CCCcHHHHHHHHHHHHHHHHHHHhC
Q psy12805 1352 TLDPRSNYSTVEKTYLTTVPRVYAAGDCRR-GQSLVVWAISEGRQAAREIDSFLMG 1406 (1429)
Q Consensus 1352 eld~~G~I~VD~~~~~TSvPgVFAAGD~a~-g~~lvv~Ai~qGr~AA~nI~~~L~g 1406 (1429)
. +++|+|.||+ +++||+|+|||+|||+. ++.++++|+.||+.||.+|++||..
T Consensus 254 ~-~~~G~I~vd~-~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 254 T-NDVGYIVTKD-DMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp B-CTTSCBCCCT-TSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred e-cCCCeEeeCC-CCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 6 4579999997 89999999999999986 5689999999999999999999964
No 35
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.73 E-value=2.5e-17 Score=199.04 Aligned_cols=183 Identities=16% Similarity=0.129 Sum_probs=147.4
Q ss_pred ceEEEccCCCCCcCCc----cCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCcc-----ccccccchhhcc
Q psy12805 1210 GFIKYSRETAPYRPAE----KRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLG-----NIIPKWNDLIYH 1280 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~----~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~-----~iLp~~d~lvf~ 1280 (1429)
.++.+|||+.|..|+. ....++++++.+...|++++|+|+|+++||++..++.+|++|. .+++.++.
T Consensus 152 d~lviATGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~---- 227 (483)
T 3dgh_A 152 QTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQ---- 227 (483)
T ss_dssp EEEEECCCEEECCCSSTTHHHHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTTSCH----
T ss_pred CEEEEeCCCCcCCCCCCCcccccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcccCH----
Confidence 3478999999988742 2346888998888889999999999999999999999999983 44555555
Q ss_pred chHHHHHHHHHHhCCC--CCCcEEEEEEEeecCCCceEEEEeC---CCeeEEEecEEEEeccccCchhhh-hhccCcccc
Q psy12805 1281 NNWSEALNQLLQTNNF--PAGIKTVKVEWTKDATGRWKMDEVP---NSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLD 1354 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~G~--~~gv~v~~Ve~~k~~~G~~~~v~~~---gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld 1354 (1429)
++.+.+.+.|+++|+ .++..+.+++.. +++.+.....+ ++.+++++|.||+|+|++|+...+ ++.+|++++
T Consensus 228 -~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~ 304 (483)
T 3dgh_A 228 -QMAELVAASMEERGIPFLRKTVPLSVEKQ--DDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQ 304 (483)
T ss_dssp -HHHHHHHHHHHHTTCCEEETEEEEEEEEC--TTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCB
T ss_pred -HHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCcccc
Confidence 899999999999984 457777777542 34443333222 334589999999999999554444 589999999
Q ss_pred CCCCEEecCCCCccCCCCEEEeCCCC-CCCCcHHHHHHHHHHHHHHHH
Q psy12805 1355 PRSNYSTVEKTYLTTVPRVYAAGDCR-RGQSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1355 ~~G~I~VD~~~~~TSvPgVFAAGD~a-~g~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+ |+|.||+ +++|++|+|||+|||+ ..+.+++.|+.||+.||.+|.
T Consensus 305 ~-G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 350 (483)
T 3dgh_A 305 K-DKIPVDS-QEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLY 350 (483)
T ss_dssp T-TBBCCCT-TCBCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHH
T ss_pred C-CEEEECc-CCccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHc
Confidence 8 9999997 8999999999999998 458899999999999999986
No 36
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.72 E-value=3.7e-17 Score=198.71 Aligned_cols=182 Identities=18% Similarity=0.211 Sum_probs=147.7
Q ss_pred ceEEEccCCCCCcCCc---cCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhhcc
Q psy12805 1210 GFIKYSRETAPYRPAE---KRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLIYH 1280 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~---~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lvf~ 1280 (1429)
.++.+|||+.|..|+. ..+.++++++++.. |++++|+|+|.++||++..++.+|++| ..++|.+++
T Consensus 143 d~lViAtGs~p~~p~i~G~~~~~~~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~---- 217 (500)
T 1onf_A 143 RNILIAVGNKPVFPPVKGIENTISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDE---- 217 (500)
T ss_dssp SSEEECCCCCBCCCSCTTGGGCEEHHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCH----
T ss_pred CEEEECCCCCCCCCCCCCCCcccCHHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcccch----
Confidence 4588999999987742 34678888888766 999999999999999999999999998 455666665
Q ss_pred chHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-hhccCccccCCC
Q psy12805 1281 NNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDPRS 1357 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~~G 1357 (1429)
++.+.+.+.|+++| +.++.++.+++.. .++.+... ..+++++++||.||+|+|++|+...| ++++|+++ ++|
T Consensus 218 -~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~~~~v~-~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G 292 (500)
T 1onf_A 218 -SVINVLENDMKKNNINIVTFADVVEIKKV--SDKNLSIH-LSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNN 292 (500)
T ss_dssp -HHHHHHHHHHHHTTCEEECSCCEEEEEES--STTCEEEE-ETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSS
T ss_pred -hhHHHHHHHHHhCCCEEEECCEEEEEEEc--CCceEEEE-ECCCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCC
Confidence 89999999999998 5668888888642 23333333 33333249999999999999655457 79999999 789
Q ss_pred CEEecCCCCccCCCCEEEeCCCC----------------------------------CCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1358 NYSTVEKTYLTTVPRVYAAGDCR----------------------------------RGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1358 ~I~VD~~~~~TSvPgVFAAGD~a----------------------------------~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
+|.||+ +++||.|+|||+|||+ ..+.+++.|+.||+.||.+|..
T Consensus 293 ~i~vd~-~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 293 YIVVDE-NQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp CEEECT-TCBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred EEEECC-CcccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 999997 7999999999999998 4567899999999999999963
No 37
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.72 E-value=2.4e-17 Score=195.32 Aligned_cols=173 Identities=19% Similarity=0.164 Sum_probs=133.1
Q ss_pred HHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHH----HHhc
Q psy12805 514 IYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQV----LALN 589 (1429)
Q Consensus 514 I~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~----L~~~ 589 (1429)
|.++++.+ +.||++|.+. ....|..+.++|+|.|++ |. |+++.. ..+.+|+|+..+|.++.+. |.+.
T Consensus 203 i~~l~~~~-~~pvi~ggi~---t~e~a~~~~~~Gad~i~v-g~-Gg~~~~---~~~~~g~~~~~~l~~v~~~~~~~~~~~ 273 (393)
T 2qr6_A 203 LKEFIGSL-DVPVIAGGVN---DYTTALHMMRTGAVGIIV-GG-GENTNS---LALGMEVSMATAIADVAAARRDYLDET 273 (393)
T ss_dssp HHHHHHHC-SSCEEEECCC---SHHHHHHHHTTTCSEEEE-SC-CSCCHH---HHTSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-CCCEEECCcC---CHHHHHHHHHcCCCEEEE-CC-Cccccc---ccCCCCCChHHHHHHHHHHHHHhHhhc
Confidence 45566665 7999998442 345678889999999999 54 333322 3457899999999999887 3333
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhc-----cccccccccCCCCccceecCHHHHhhcCCc---
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMG-----CTMMRKCHLNTCPVGIATQDPELRKKFAGK--- 661 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~alg-----c~~~r~c~~~~cP~giatqd~~lr~~~~g~--- 661 (1429)
+.| +++||++|||+++.|++||+++||++|++|++++.+.+ |.+...|..++||.|+.||++.+. ++.+.
T Consensus 274 ~~~-~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~es~~~~~~~g~~~~~~~~~~Gv~~~~~~~~-~~~~~~~~ 351 (393)
T 2qr6_A 274 GGR-YVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEEAAGKGYFWPAVAAHPRFPRGVVTESVDLD-EAAPSLEQ 351 (393)
T ss_dssp TSC-CCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTTCTTTTEECCGGGGCSSSCCCCCEECC-----CCCCHHH
T ss_pred CCc-ceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCCCCCceEEEecccCcccCCCcccccccccc-ccchhHHH
Confidence 333 49999999999999999999999999999999988887 566667888899999999998643 22222
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCccc
Q psy12805 662 ----PEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLL 698 (1429)
Q Consensus 662 ----~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll 698 (1429)
++.+.+|+..+.+||+..|+.+|+++++|| .+.+++
T Consensus 352 ~~~g~~~~~~~~~~l~~el~~~m~~~G~~~i~el-~~~~~~ 391 (393)
T 2qr6_A 352 ILHGPSTMPWGVENFEGGLKRALAKCGYTDLKSF-QKVSLH 391 (393)
T ss_dssp HHHCCCSCTTSSSCHHHHHHHHHHHHTCSBHHHH-TTCCEE
T ss_pred HhccchhHHHHHHHHHHHHHHHHHHhCCCCHHHH-hhccEe
Confidence 344567788999999999999999999998 556654
No 38
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.72 E-value=2.6e-17 Score=192.31 Aligned_cols=283 Identities=16% Similarity=0.125 Sum_probs=178.2
Q ss_pred CC-CCCCccccc----------ccceeeCCCCCccchHHHHHHHHHHHHHhCCcEEecCCCCCccccccCCCccccccee
Q psy12805 370 DI-SEVEPAAEI----------VKRFATGAMSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIK 438 (1429)
Q Consensus 370 ~~-~~v~~~~~i----------~~pf~i~aMS~GslS~ea~~aLA~aa~~~G~~~~tGEGg~~~~~~~~~~~~~~~~~I~ 438 (1429)
+. ++|+..++| ..||++++|++++- ..||+|+.+.|+....+. +.+++... ..++
T Consensus 35 ~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~~~~-----~~lA~Ava~~Gglg~i~~-~~s~e~~~--------~~i~ 100 (351)
T 2c6q_A 35 KSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGT-----FEMAKVLCKFSLFTAVHK-HYSLVQWQ--------EFAG 100 (351)
T ss_dssp CCGGGCBCCEEEECTTTCCEEEECCEEECSSTTTSC-----HHHHHHHHHTTCEEECCT-TCCHHHHH--------HHHH
T ss_pred CccccceeEEEeccccCcCccccCCEEECCCCCCCc-----HHHHHHHHHCCCEEEEcC-CCCHHHHH--------HHHh
Confidence 44 566655554 48999999998753 568999999997555542 34444421 1121
Q ss_pred ecccCCCCCChhhhccccchhhhcccCCCCCCCCCcccccchHHHHhccCCCCccccccCCCCCCCCCHHHHHHHHHHHH
Q psy12805 439 QVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGELPGYKVTKDIASTRHSVPGVGLISPPPHHDIYSIEDLAELIYDLK 518 (1429)
Q Consensus 439 Q~asgrfGv~~~~L~~a~~ieIk~gQGAKpG~GG~lpg~KV~~~iA~~r~~~pg~~LisP~~h~di~siedL~qlI~~Lk 518 (1429)
+ .+..+. .+-..+|..+ +..+.+..+....++...++..-.+ -+..++.+.|+++|
T Consensus 101 ~--------~p~~l~-----~v~~~~g~~~---------~~~~~~~~l~~~~~g~~~i~i~~~~--g~~~~~~~~i~~lr 156 (351)
T 2c6q_A 101 Q--------NPDCLE-----HLAASSGTGS---------SDFEQLEQILEAIPQVKYICLDVAN--GYSEHFVEFVKDVR 156 (351)
T ss_dssp H--------CGGGCT-----TEEEEECSSH---------HHHHHHHHHHHHCTTCCEEEEECSC--TTBHHHHHHHHHHH
T ss_pred h--------Cchhhh-----eeEeecCCCh---------HHHHHHHHHHhccCCCCEEEEEecC--CCcHHHHHHHHHHH
Confidence 1 011110 1222222221 0111222221112344333221111 12356788999999
Q ss_pred HhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEE
Q psy12805 519 CANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQ 598 (1429)
Q Consensus 519 ~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Li 598 (1429)
+.+|+.||++|.+. -...|..+.++|+|+|+++.+.|+.. .-...+.+++|++.+|.++.+..... +++||
T Consensus 157 ~~~~~~~vi~g~v~---t~e~A~~a~~aGaD~I~v~~g~G~~~--~~r~~~g~~~p~~~~l~~v~~~~~~~----~ipvI 227 (351)
T 2c6q_A 157 KRFPQHTIMAGNVV---TGEMVEELILSGADIIKVGIGPGSVC--TTRKKTGVGYPQLSAVMECADAAHGL----KGHII 227 (351)
T ss_dssp HHCTTSEEEEEEEC---SHHHHHHHHHTTCSEEEECSSCSTTB--CHHHHHCBCCCHHHHHHHHHHHHHHT----TCEEE
T ss_pred HhcCCCeEEEEeCC---CHHHHHHHHHhCCCEEEECCCCCcCc--CccccCCCCccHHHHHHHHHHHHhhc----CCcEE
Confidence 99888999999553 34568889999999999976543211 11124568999999999998876443 48999
Q ss_pred EcCCcccHHHHHHHHHhcchhhhcchhHHHHhccc---cccccccCCCCccceecCHHHHh-----hcCCcHHH------
Q psy12805 599 ADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCT---MMRKCHLNTCPVGIATQDPELRK-----KFAGKPEH------ 664 (1429)
Q Consensus 599 asGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~---~~r~c~~~~cP~giatqd~~lr~-----~~~g~~e~------ 664 (1429)
++|||+|+.|++||++|||++|++||.++.+..|. ........+|..|+++..+..+. ++. .++.
T Consensus 228 a~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g~~~k~~~g~~~~~a~~~~~g~~~~~~-~~~g~~~~~~ 306 (351)
T 2c6q_A 228 SDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYR-ASEGKTVEVP 306 (351)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETTEEEEEEECTTBHHHHHHHSSSCCTTC-CCCBCEEEEE
T ss_pred EeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcCeeeeeccccccHhhhhcccccccccc-cccceEEEee
Confidence 99999999999999999999999999877644332 22222233566677665542221 110 0234
Q ss_pred ----HHHHHHHHHHHHHHHHHhcCCCChhhhcCCCccccc
Q psy12805 665 ----VINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKP 700 (1429)
Q Consensus 665 ----v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~ 700 (1429)
|.++++.|..||+..|..+|+++++||.....++..
T Consensus 307 ~~g~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~~~~v~~ 346 (351)
T 2c6q_A 307 FKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRV 346 (351)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHTCSBGGGHHHHCCEEEC
T ss_pred ccCcHHHHHHHHHHHHHHHHHHcCCCCHHHHhhCCcEEEE
Confidence 899999999999999999999999998554444443
No 39
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.72 E-value=2.5e-17 Score=198.31 Aligned_cols=182 Identities=20% Similarity=0.194 Sum_probs=148.6
Q ss_pred ceEEEccCCCCCcCCc---cCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhhcc
Q psy12805 1210 GFIKYSRETAPYRPAE---KRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLIYH 1280 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~---~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lvf~ 1280 (1429)
.++.+|||+.|..|+. ..+.++++++++...|++++|+|+|.+++|++..+++.|++| ..+++.+++
T Consensus 132 d~lviAtGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~---- 207 (463)
T 2r9z_A 132 DHIVIATGGRPIVPRLPGAELGITSDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDP---- 207 (463)
T ss_dssp EEEEECCCEEECCCSCTTGGGSBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCH----
T ss_pred CEEEECCCCCCCCCCCCCccceecHHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCH----
Confidence 3478999999887742 346788899888778999999999999999999999999998 345555554
Q ss_pred chHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-hhccCccccCCC
Q psy12805 1281 NNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDPRS 1357 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~~G 1357 (1429)
++.+.+.+.+++.| +.++.++.+++.. .++ +.....+|+. ++++|.||+|+|++|+...| ++++|++++++|
T Consensus 208 -~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~G~~-~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G 282 (463)
T 2r9z_A 208 -LLSATLAENMHAQGIETHLEFAVAALERD--AQG-TTLVAQDGTR-LEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNG 282 (463)
T ss_dssp -HHHHHHHHHHHHTTCEEESSCCEEEEEEE--TTE-EEEEETTCCE-EEEESEEEECSCEEESCTTSCHHHHTCCCCTTS
T ss_pred -HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCe-EEEEEeCCcE-EEEcCEEEECCCCCcCCCCCCchhcCCccCCCC
Confidence 88889999999988 5668888888653 222 3333323332 79999999999999655446 788999999999
Q ss_pred CEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHH
Q psy12805 1358 NYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1358 ~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+|.||+ +++||.|+|||+|||+..+.+++.|+.||+.||.+|.
T Consensus 283 ~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~ 325 (463)
T 2r9z_A 283 MVPTDA-YQNTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLF 325 (463)
T ss_dssp CCCCCT-TSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHH
T ss_pred CEeECC-CCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHc
Confidence 999997 7999999999999999888999999999999999986
No 40
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.72 E-value=2.5e-17 Score=185.41 Aligned_cols=188 Identities=14% Similarity=0.055 Sum_probs=126.9
Q ss_pred eEEEccCCCCCcCCccC--------ccchHHHH--hhccCCCceEEEccccccccHHHHHHhCCCCccccccccchhhcc
Q psy12805 1211 FIKYSRETAPYRPAEKR--------LKDWDEIY--ATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYH 1280 (1429)
Q Consensus 1211 f~kiAtGs~P~~p~~~r--------v~D~~el~--~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~ 1280 (1429)
.+.+|||+.|.+|+... +....... .....+++++|+|+|.++||++..++++|++|..+-+.....
T Consensus 112 ~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~--- 188 (314)
T 4a5l_A 112 SVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFR--- 188 (314)
T ss_dssp EEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC---
T ss_pred EEEEcccccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccccc---
Confidence 37899999998764221 12222222 222357899999999999999999999999996543322110
Q ss_pred chHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEE-eCCCeeEEEecEEEEeccccCchhhhhhccCccccCCC
Q psy12805 1281 NNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDE-VPNSEKIFKCDLVLLAMGFLGPERYIANELDLTLDPRS 1357 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~-~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~~G 1357 (1429)
.......+.+...+ +.......+++............. ..++.++++||.|++|+|++ |+.++++. +++++++|
T Consensus 189 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~-pn~~~l~~-~~~~~~~G 265 (314)
T 4a5l_A 189 -ASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHS-PNSKFLGG-QVKTADDG 265 (314)
T ss_dssp -SCHHHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEE-ESCGGGTT-SSCBCTTS
T ss_pred -ccchhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccc-cChhHhcc-cceEcCCe
Confidence 11122223333333 233445555544211111112222 34566789999999999999 55666653 57888888
Q ss_pred CEEecCCCCccCCCCEEEeCCCCCCC-CcHHHHHHHHHHHHHHHHHHHhC
Q psy12805 1358 NYSTVEKTYLTTVPRVYAAGDCRRGQ-SLVVWAISEGRQAAREIDSFLMG 1406 (1429)
Q Consensus 1358 ~I~VD~~~~~TSvPgVFAAGD~a~g~-~lvv~Ai~qGr~AA~nI~~~L~g 1406 (1429)
.| ||+ +++||+|+|||+|||+..+ .+++.|+.+|+.||.+|++||+.
T Consensus 266 ~i-v~~-~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 266 YI-LTE-GPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp CB-CCB-TTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eE-eCC-CCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 66 775 7999999999999999876 58999999999999999999964
No 41
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.72 E-value=2.2e-17 Score=200.33 Aligned_cols=180 Identities=14% Similarity=0.204 Sum_probs=149.5
Q ss_pred ceEEEccCCCCCcCC-----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhh
Q psy12805 1210 GFIKYSRETAPYRPA-----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLI 1278 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~-----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lv 1278 (1429)
.++.+|||+.|..|+ ...+.++++++++...+++++|+|+|.+++|++..+..+|++| ..++|.+++
T Consensus 146 d~lviATGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~-- 223 (499)
T 1xdi_A 146 DVVLVATGASPRILPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDA-- 223 (499)
T ss_dssp SEEEECCCEEECCCGGGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSH--
T ss_pred CEEEEcCCCCCCCCCCCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCH--
Confidence 458899999998763 2346788888888778999999999999999999999999998 456666555
Q ss_pred ccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh--hhccCcccc
Q psy12805 1279 YHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI--ANELDLTLD 1354 (1429)
Q Consensus 1279 f~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L--le~lGLeld 1354 (1429)
++.+.+.+.+++.| +.++.++.+++.. ++.+... .. +.++++||.||+|+|++| +..+ ++++|++++
T Consensus 224 ---~~~~~l~~~l~~~GV~i~~~~~V~~i~~~---~~~v~v~-~~-~g~~i~aD~Vv~a~G~~p-~~~~l~l~~~gl~~~ 294 (499)
T 1xdi_A 224 ---DAALVLEESFAERGVRLFKNARAASVTRT---GAGVLVT-MT-DGRTVEGSHALMTIGSVP-NTSGLGLERVGIQLG 294 (499)
T ss_dssp ---HHHHHHHHHHHHTTCEEETTCCEEEEEEC---SSSEEEE-ET-TSCEEEESEEEECCCEEE-CCSSSCTTTTTCCCB
T ss_pred ---HHHHHHHHHHHHCCCEEEeCCEEEEEEEe---CCEEEEE-EC-CCcEEEcCEEEECCCCCc-CCCcCCchhcCceEC
Confidence 89999999999998 5678888888652 2333332 23 334799999999999995 4555 789999999
Q ss_pred CCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHH
Q psy12805 1355 PRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1355 ~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
++|+|.||+ +++|+.|+|||+|||+..+.+++.|+.||+.||.+|.
T Consensus 295 ~~G~i~Vd~-~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~ 340 (499)
T 1xdi_A 295 RGNYLTVDR-VSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHAL 340 (499)
T ss_dssp TTTBCCCCS-SSBCSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEECC-CcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhc
Confidence 999999997 8999999999999999988999999999999999986
No 42
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.71 E-value=3.2e-17 Score=197.05 Aligned_cols=183 Identities=15% Similarity=0.139 Sum_probs=150.2
Q ss_pred ceEEEccCCCCC-cCC---ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhhc
Q psy12805 1210 GFIKYSRETAPY-RPA---EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLIY 1279 (1429)
Q Consensus 1210 gf~kiAtGs~P~-~p~---~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lvf 1279 (1429)
.++.+|||+.|. .|+ ...+.++++++.+...+++++|+|+|.+++|++..+...|++| ..+++.+++
T Consensus 135 d~lviAtG~~p~~~p~i~G~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~--- 211 (463)
T 4dna_A 135 ERIVIAVGGHPSPHDALPGHELCITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQ--- 211 (463)
T ss_dssp EEEEECCCEEECCCTTSTTGGGCBCHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCH---
T ss_pred CEEEEecCCCcccCCCCCCccccccHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCH---
Confidence 347799999888 663 3457788999988888999999999999999999999999988 345566565
Q ss_pred cchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-hhccCccccCC
Q psy12805 1280 HNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDPR 1356 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~~ 1356 (1429)
++.+.+.+.++++| +..+..+.+++.. .++.+......++ + ++||.||+|+|++|+...| ++.+|++++++
T Consensus 212 --~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~g-~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~ 285 (463)
T 4dna_A 212 --DMRRGLHAAMEEKGIRILCEDIIQSVSAD--ADGRRVATTMKHG-E-IVADQVMLALGRMPNTNGLGLEAAGVRTNEL 285 (463)
T ss_dssp --HHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSCEEEEESSSC-E-EEESEEEECSCEEESCTTSSTGGGTCCBCTT
T ss_pred --HHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCCEEEEEEcCCC-e-EEeCEEEEeeCcccCCCCCCccccCceECCC
Confidence 88999999999998 5667888888652 3343332203333 3 9999999999999655444 88999999999
Q ss_pred CCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1357 SNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1357 G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
|+|.||+ +++|++|+|||+|||+..+++++.|+.||+.||.+|..
T Consensus 286 G~i~vd~-~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 286 GAIIVDA-FSRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp SCBCCCT-TCBCSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHS
T ss_pred CCEeECc-CCCCCCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 9999997 89999999999999999999999999999999999963
No 43
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.71 E-value=3.5e-17 Score=200.06 Aligned_cols=184 Identities=20% Similarity=0.206 Sum_probs=150.1
Q ss_pred ceEEEccCCCCCcCCc-----cCccchHHHH-hhccCC-CceEEEccccccccHHHHHHhCCCCc------cccccccch
Q psy12805 1210 GFIKYSRETAPYRPAE-----KRLKDWDEIY-ATQHVR-KGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWND 1276 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~-----~rv~D~~el~-~l~~~p-k~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~ 1276 (1429)
.++.+|||+.|..|+. ..+.++++++ ++...| ++++|+|+|.++||++..+...|++| ..++|.++.
T Consensus 176 d~lViATGs~p~~p~i~G~~~~~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~ 255 (523)
T 1mo9_A 176 KNLILAVGAGPGTLDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDN 255 (523)
T ss_dssp SCEEECCCEECCCCCSTTTTSBTEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSH
T ss_pred CEEEECCCCCCCCCCCCCcccCcEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccH
Confidence 4588999999987732 2367888998 777778 99999999999999999999999988 445555554
Q ss_pred hhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCce--EEEEeCCCeeEEEecEEEEeccccCchhh-hhhccCc
Q psy12805 1277 LIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRW--KMDEVPNSEKIFKCDLVLLAMGFLGPERY-IANELDL 1351 (1429)
Q Consensus 1277 lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~--~~v~~~gse~~ieaDlVLlAiG~~pp~~~-Lle~lGL 1351 (1429)
++.+.+.+.+++.| +.++.++.+++.. .++++ ..+...+++++++||.||+|+|++ |+.. +++.+|+
T Consensus 256 -----~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~-p~~~~~l~~~gl 327 (523)
T 1mo9_A 256 -----ETRAYVLDRMKEQGMEIISGSNVTRIEED--ANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ-PRSAELAKILGL 327 (523)
T ss_dssp -----HHHHHHHHHHHHTTCEEESSCEEEEEEEC--TTSBEEEEEEEETTEEEEEECSCEEECCCCE-ECCHHHHHHHTC
T ss_pred -----HHHHHHHHHHHhCCcEEEECCEEEEEEEc--CCCceEEEEEEECCCcEEEEcCEEEECcCCc-cCCccCHHHcCC
Confidence 88999999999988 5678888888642 23431 122333332379999999999999 4555 7889999
Q ss_pred cccCCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1352 TLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1352 eld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
+++++|+|.||+ +++|+.|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 328 ~~~~~G~i~Vd~-~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 328 DLGPKGEVLVNE-YLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp CBCTTSCBCCCT-TSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCEEECC-CCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcC
Confidence 999999999997 89999999999999999889999999999999999963
No 44
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.71 E-value=3.6e-17 Score=196.94 Aligned_cols=182 Identities=17% Similarity=0.158 Sum_probs=147.8
Q ss_pred ceEEEccCCCCCcCC---ccCccchHHHH----hhccCCCceEEEccccccccHHHHHHhCCCCc------ccccccc-c
Q psy12805 1210 GFIKYSRETAPYRPA---EKRLKDWDEIY----ATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKW-N 1275 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~---~~rv~D~~el~----~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~-d 1275 (1429)
.++.+|||+.|..|+ ...+.+.+++. .+...|++++|+|+|.++||++..++.+|++| .++++.+ +
T Consensus 134 d~lviAtG~~p~~p~i~G~~~~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d 213 (466)
T 3l8k_A 134 RYMIIASGAETAKLRLPGVEYCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLED 213 (466)
T ss_dssp EEEEECCCEEECCCCCTTGGGSBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCC
T ss_pred CEEEECCCCCccCCCCCCccceEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCC
Confidence 347899999988763 23578889998 66667899999999999999999999999988 4556655 5
Q ss_pred hhhccchHHHHHHHHHHhCCCCCCcEEEEEEEeecCCCceEEEEe--CCCeeEEEecEEEEeccccCchhhh-hhccCcc
Q psy12805 1276 DLIYHNNWSEALNQLLQTNNFPAGIKTVKVEWTKDATGRWKMDEV--PNSEKIFKCDLVLLAMGFLGPERYI-ANELDLT 1352 (1429)
Q Consensus 1276 ~lvf~~e~~~al~~~Le~~G~~~gv~v~~Ve~~k~~~G~~~~v~~--~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLe 1352 (1429)
+ ++.+.+.+.++ -.+..+.++.+++... ++.+..... +|+.+++++|.||+|+|++|+.. | ++.+|++
T Consensus 214 ~-----~~~~~l~~~l~-v~i~~~~~v~~i~~~~--~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~ 284 (466)
T 3l8k_A 214 Q-----DIVNTLLSILK-LNIKFNSPVTEVKKIK--DDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLS 284 (466)
T ss_dssp H-----HHHHHHHHHHC-CCEECSCCEEEEEEEE--TTEEEEEECCTTSCCEEEEESCEEECCCEEECCC-TTTGGGTCC
T ss_pred H-----HHHHHHHhcCE-EEEEECCEEEEEEEcC--CCcEEEEEEecCCceEEEEcCEEEECcCCCcccc-cchhhcCce
Confidence 4 78888888776 4456678888886532 133333333 34556899999999999996555 7 8999999
Q ss_pred ccCCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1353 LDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1353 ld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
++++| |.||+ +++|++|+|||+|||+..+++++.|+.||+.||.+|..
T Consensus 285 ~~~~G-i~vd~-~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 285 ISKTG-IVVDE-TMKTNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp BCSSS-BCCCT-TCBCSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHT
T ss_pred eCCCC-EeECC-CccCCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhC
Confidence 99999 99997 89999999999999999999999999999999999963
No 45
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.71 E-value=9.7e-17 Score=189.41 Aligned_cols=262 Identities=17% Similarity=0.104 Sum_probs=172.9
Q ss_pred CCCCCCcccc-----cccceeeCCCCCccc-hHHHHHHHHHHHHHhCCcEEecCCCCC-ccccccCCCcccccceeeccc
Q psy12805 370 DISEVEPAAE-----IVKRFATGAMSFGSI-SIEAHTTLAKAMNKIGAKSNTGEGGEN-PERYLSSGDENQRSAIKQVAS 442 (1429)
Q Consensus 370 ~~~~v~~~~~-----i~~pf~i~aMS~Gsl-S~ea~~aLA~aa~~~G~~~~tGEGg~~-~~~~~~~~~~~~~~~I~Q~as 442 (1429)
+.+++++.++ +..||++++|++..+ +++.+.++|++|++.|+.+.+++.... .++..... ......|+..
T Consensus 56 ~~~~~d~st~i~G~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~---~~~~~fQly~ 132 (380)
T 1p4c_A 56 DVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQC---DGDLWFQLYV 132 (380)
T ss_dssp CCSSCBCCEEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHC---CSCEEEEECC
T ss_pred CCccCcceeEECCeecCCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhcc---CCCeEEEEEe
Confidence 5556666655 669999999987765 889999999999999999999986543 22211100 1223446542
Q ss_pred CCCCCChhhhcccc-----chh--------------hhcccCCCC--CCCCCcc--cccchHH--HHhccCCCCcccccc
Q psy12805 443 GRFGVTSSYLAHAD-----DLQ--------------IKMAQGAKP--GEGGELP--GYKVTKD--IASTRHSVPGVGLIS 497 (1429)
Q Consensus 443 grfGv~~~~L~~a~-----~ie--------------Ik~gQGAKp--G~GG~lp--g~KV~~~--iA~~r~~~pg~~Lis 497 (1429)
.+.+..++.+..+. +++ ++.+-...+ +.+-.+| ..++.+. -+...+. +..++
T Consensus 133 ~~~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~---~~~~~ 209 (380)
T 1p4c_A 133 IHREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALM---SRQMD 209 (380)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHT---SSCCC
T ss_pred chHHHHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHH---HhhcC
Confidence 22344444443322 122 222211110 1000000 0000000 0000000 11223
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHH
Q psy12805 498 PPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWEL 577 (1429)
Q Consensus 498 P~~h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~l 577 (1429)
| ++ + .+.|+.+++.+ +.||+||.+ .....|..+.++|+|.|+|++++|. ..+++.|+..
T Consensus 210 p----~~-~----~~~i~~i~~~~-~~Pv~vkgv---~t~e~a~~a~~aGad~I~vs~~gg~--------~~d~~~~~~~ 268 (380)
T 1p4c_A 210 A----SF-N----WEALRWLRDLW-PHKLLVKGL---LSAEDADRCIAEGADGVILSNHGGR--------QLDCAISPME 268 (380)
T ss_dssp T----TC-C----HHHHHHHHHHC-CSEEEEEEE---CCHHHHHHHHHTTCSEEEECCGGGT--------SCTTCCCGGG
T ss_pred c----cc-c----HHHHHHHHHhc-CCCEEEEec---CcHHHHHHHHHcCCCEEEEcCCCCC--------cCCCCcCHHH
Confidence 3 22 2 35677888876 799999964 3456788899999999999988543 2367889988
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhh
Q psy12805 578 GVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKK 657 (1429)
Q Consensus 578 aL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~ 657 (1429)
.+.++.+.+ .++||++|||+++.|++|++++||++|++|++++..+.|
T Consensus 269 ~l~~v~~~~-------~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~~------------------------- 316 (380)
T 1p4c_A 269 VLAQSVAKT-------GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAA------------------------- 316 (380)
T ss_dssp THHHHHHHH-------CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHHH-------------------------
T ss_pred HHHHHHHHc-------CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHHh-------------------------
Confidence 899888776 348999999999999999999999999999988876531
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhc
Q psy12805 658 FAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLV 692 (1429)
Q Consensus 658 ~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~Elv 692 (1429)
++.+.+.++++.+.++|+.+|..+|+++++|+.
T Consensus 317 --~g~~~v~~~~~~l~~el~~~m~~~G~~~i~el~ 349 (380)
T 1p4c_A 317 --RGETGVDEVLTLLKADIDRTLAQIGCPDITSLS 349 (380)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCC
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhc
Confidence 235789999999999999999999999999984
No 46
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.70 E-value=8.5e-17 Score=193.37 Aligned_cols=180 Identities=17% Similarity=0.222 Sum_probs=148.7
Q ss_pred ceEEEccCCCCCcCC-----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhh
Q psy12805 1210 GFIKYSRETAPYRPA-----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLI 1278 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~-----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lv 1278 (1429)
.++.+|||+.|..|+ ...+.+.++++++...+++++|+|+|.+++|++..++..|++| ..++| ++.
T Consensus 140 d~lviAtGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~-- 216 (467)
T 1zk7_A 140 DRCLVATGASPAVPPIPGLKESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-EDP-- 216 (467)
T ss_dssp SEEEECCCEEECCCCCTTTTTSCCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-SCH--
T ss_pred CEEEEeCCCCCCCCCCCCCCcCceecHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-CCH--
Confidence 458899999988773 2346788999998878999999999999999999999999998 34555 554
Q ss_pred ccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-hhccCccccC
Q psy12805 1279 YHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDP 1355 (1429)
Q Consensus 1279 f~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~ 1355 (1429)
++.+.+.+.++++| +.++.++.+++.. ++.+. +..++ .+++||.||+|+|+.|+...+ ++.+|+++++
T Consensus 217 ---~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~---~~~~~-v~~~~--~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~ 287 (467)
T 1zk7_A 217 ---AIGEAVTAAFRAEGIEVLEHTQASQVAHM---DGEFV-LTTTH--GELRADKLLVATGRTPNTRSLALDAAGVTVNA 287 (467)
T ss_dssp ---HHHHHHHHHHHHTTCEEETTCCEEEEEEE---TTEEE-EEETT--EEEEESEEEECSCEEESCTTSCGGGGTCCBCT
T ss_pred ---HHHHHHHHHHHhCCCEEEcCCEEEEEEEe---CCEEE-EEECC--cEEEcCEEEECCCCCcCCCcCCchhcCCcCCC
Confidence 88999999999988 5668888888652 23222 23333 379999999999999654444 6889999998
Q ss_pred CCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1356 RSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1356 ~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
+|+|.||+ +++|+.|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 288 ~G~i~vd~-~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 288 QGAIVIDQ-GMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp TSCBCCCT-TCBCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEECC-CcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 99999997 89999999999999999999999999999999999863
No 47
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.70 E-value=2.5e-16 Score=187.23 Aligned_cols=185 Identities=20% Similarity=0.193 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHH
Q psy12805 507 IEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVL 586 (1429)
Q Consensus 507 iedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L 586 (1429)
++.+.++|+.+|+.+|+.||+++-+ .....|..+.++|+|+|++ |.++|+.. +......+|.|...++.++.+.+
T Consensus 178 ~~~~~e~i~~ir~~~~~~pviv~~v---~~~~~a~~a~~~Gad~I~v-g~~~G~~~-~~~~~~~~g~p~~~~l~~v~~~~ 252 (404)
T 1eep_A 178 STRIIELIKKIKTKYPNLDLIAGNI---VTKEAALDLISVGADCLKV-GIGPGSIC-TTRIVAGVGVPQITAICDVYEAC 252 (404)
T ss_dssp SHHHHHHHHHHHHHCTTCEEEEEEE---CSHHHHHHHHTTTCSEEEE-CSSCSTTS-HHHHHHCCCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCCeEEEcCC---CcHHHHHHHHhcCCCEEEE-CCCCCcCc-CccccCCCCcchHHHHHHHHHHH
Confidence 3678889999999987899999733 3345678889999999999 44444421 11123456889888888888865
Q ss_pred HhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccc--------cccccccCCCCccceec---CHHHH
Q psy12805 587 ALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCT--------MMRKCHLNTCPVGIATQ---DPELR 655 (1429)
Q Consensus 587 ~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~--------~~r~c~~~~cP~giatq---d~~lr 655 (1429)
.. .+++||++|||+|+.|+++++++|||+|++|++++.+.+|. +..+|+.+.||.|+.++ ++.+.
T Consensus 253 ~~----~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~~~g~~~~g~~~~~~~ 328 (404)
T 1eep_A 253 NN----TNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKRGSKSRYFQ 328 (404)
T ss_dssp TT----SSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC--------------------
T ss_pred hh----cCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCcchhhhCCeEEeecCCCCCHHHHhhccccchhc
Confidence 32 26999999999999999999999999999999999888886 56789999999999996 33221
Q ss_pred ------hhc-CCcHHH-------HHHHHHHHHHHHHHHHHhcCCCChhhhcCCCccccc
Q psy12805 656 ------KKF-AGKPEH-------VINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKP 700 (1429)
Q Consensus 656 ------~~~-~g~~e~-------v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~ 700 (1429)
+.+ .++.+. |.++++.+.+||+..|+.+|+++++||.....++..
T Consensus 329 g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~~~G~~~i~~l~~~~~~~~~ 387 (404)
T 1eep_A 329 LENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKFVKI 387 (404)
T ss_dssp ----------------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCEEEC
T ss_pred ccccccccccCceeEEeccCCccHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCcEEEE
Confidence 111 223343 899999999999999999999999999666555444
No 48
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.69 E-value=1.8e-16 Score=196.44 Aligned_cols=187 Identities=16% Similarity=0.152 Sum_probs=144.4
Q ss_pred ceEEEccCCCCCcCCcc----CccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCccc-----cccccchhhcc
Q psy12805 1210 GFIKYSRETAPYRPAEK----RLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGN-----IIPKWNDLIYH 1280 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~----rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~-----iLp~~d~lvf~ 1280 (1429)
.++.+|||+.|..|+.. ...+.++++++...+++++|+|+|.+++|++..++++|++|.. ++|.+++
T Consensus 251 d~lviAtGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~---- 326 (598)
T 2x8g_A 251 NKIILATGERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRSILLRGFDQ---- 326 (598)
T ss_dssp EEEEECCCEEECCCSSTTHHHHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCH----
T ss_pred CEEEEeCCCCCCCCCCCCcccceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcCcCCH----
Confidence 34889999999887432 2356778887777789999999999999999999999999843 3344444
Q ss_pred chHHHHHHHHHHhCCC--CCCcEEEEEEEe-----ec-CCCceEEE--EeCCCeeEEEecEEEEeccccCchhhh-hhcc
Q psy12805 1281 NNWSEALNQLLQTNNF--PAGIKTVKVEWT-----KD-ATGRWKMD--EVPNSEKIFKCDLVLLAMGFLGPERYI-ANEL 1349 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~G~--~~gv~v~~Ve~~-----k~-~~G~~~~v--~~~gse~~ieaDlVLlAiG~~pp~~~L-le~l 1349 (1429)
++.+.+.+.|++.|+ ..+..+.+++.. .+ ..+.+... ..+|+...++||.||+|+|++|+...| ++.+
T Consensus 327 -~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~ 405 (598)
T 2x8g_A 327 -QMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETV 405 (598)
T ss_dssp -HHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGG
T ss_pred -HHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhc
Confidence 788899999998884 456666677543 11 12433322 224444456699999999999554444 6889
Q ss_pred CccccCCCCEEecCCCCccCCCCEEEeCCCCC-CCCcHHHHHHHHHHHHHHHHH
Q psy12805 1350 DLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRR-GQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1350 GLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~-g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
|++++++|+|.||+ +++||+|+|||+|||+. .+.+++.|+.||+.||.+|..
T Consensus 406 gl~~~~~G~i~vd~-~~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 406 GVKLDKNGRVVCTD-DEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp CCCBCTTSCBCCCT-TSBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred CceECCCCcEEeCC-CCcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhc
Confidence 99999999999997 79999999999999954 578999999999999999964
No 49
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.68 E-value=5.7e-16 Score=180.22 Aligned_cols=135 Identities=24% Similarity=0.252 Sum_probs=114.7
Q ss_pred HHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCC
Q psy12805 513 LIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLR 592 (1429)
Q Consensus 513 lI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR 592 (1429)
.|+.||+.+ +.||+||.+. ....|..+.++|+|.|+++|++|. . .+.+.|+...|.++.+.+ +
T Consensus 208 ~i~~lr~~~-~~PvivK~v~---~~e~A~~a~~~GaD~I~vsn~GG~-~-------~d~~~~~~~~L~~i~~av-----~ 270 (352)
T 3sgz_A 208 DLSLLQSIT-RLPIILKGIL---TKEDAELAMKHNVQGIVVSNHGGR-Q-------LDEVSASIDALREVVAAV-----K 270 (352)
T ss_dssp HHHHHHHHC-CSCEEEEEEC---SHHHHHHHHHTTCSEEEECCGGGT-S-------SCSSCCHHHHHHHHHHHH-----T
T ss_pred HHHHHHHhc-CCCEEEEecC---cHHHHHHHHHcCCCEEEEeCCCCC-c-------cCCCccHHHHHHHHHHHh-----C
Confidence 356677776 7999999773 345688899999999999999543 1 234788889999998865 3
Q ss_pred CceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCcHHHHHHHHHHH
Q psy12805 593 SRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEHVINYLFML 672 (1429)
Q Consensus 593 ~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~~~l 672 (1429)
++++||++|||+++.|++||++|||++|++|+++|.++.| .+++.|.++++.+
T Consensus 271 ~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~---------------------------~G~~gv~~~l~~l 323 (352)
T 3sgz_A 271 GKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLAC---------------------------KGEDGVKEVLDIL 323 (352)
T ss_dssp TSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHH---------------------------HHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHh---------------------------cCcHHHHHHHHHH
Confidence 5799999999999999999999999999999999987753 2468899999999
Q ss_pred HHHHHHHHHhcCCCChhhh
Q psy12805 673 AEEVRTHMAKLGIRKFADL 691 (1429)
Q Consensus 673 ~~eLr~iMa~mGi~sl~El 691 (1429)
.+||+..|..+|+++++|+
T Consensus 324 ~~el~~~m~~~G~~~i~el 342 (352)
T 3sgz_A 324 TAELHRCMTLSGCQSVAEI 342 (352)
T ss_dssp HHHHHHHHHHHTCSBGGGC
T ss_pred HHHHHHHHHHhCCCcHHHH
Confidence 9999999999999999997
No 50
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.68 E-value=1e-16 Score=192.02 Aligned_cols=179 Identities=15% Similarity=0.221 Sum_probs=142.3
Q ss_pred ceEEEccCCCCCcCCc-----cCcc------chHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------ccccc
Q psy12805 1210 GFIKYSRETAPYRPAE-----KRLK------DWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIP 1272 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~-----~rv~------D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp 1272 (1429)
.++.+|||+.|..|+. ..+. |.+++++....+++++|+|+|+++||++..++..|++| ..+++
T Consensus 107 d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 186 (452)
T 2cdu_A 107 DKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY 186 (452)
T ss_dssp SEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT
T ss_pred CEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh
Confidence 4588999999987732 2222 45567776778999999999999999999999999988 34455
Q ss_pred -ccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhcc
Q psy12805 1273 -KWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANEL 1349 (1429)
Q Consensus 1273 -~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~l 1349 (1429)
.++ .++.+.+.+.+++.| +.++.++.+++.. ++++..+..++ ++++||.||+|+|++| +..+++.+
T Consensus 187 ~~~~-----~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~---~~~v~~v~~~g--~~i~~D~vv~a~G~~p-~~~ll~~~ 255 (452)
T 2cdu_A 187 KYFD-----KEFTDILAKDYEAHGVNLVLGSKVAAFEEV---DDEIITKTLDG--KEIKSDIAILCIGFRP-NTELLKGK 255 (452)
T ss_dssp TTSC-----HHHHHHHHHHHHHTTCEEEESSCEEEEEEE---TTEEEEEETTS--CEEEESEEEECCCEEE-CCGGGTTT
T ss_pred hhhh-----hhHHHHHHHHHHHCCCEEEcCCeeEEEEcC---CCeEEEEEeCC--CEEECCEEEECcCCCC-CHHHHHHh
Confidence 334 489999999999998 5567888888642 34443333333 4799999999999995 55678877
Q ss_pred CccccCCCCEEecCCCCccCCCCEEEeCCCCCC----------CCcHHHHHHHHHHHHHHHH
Q psy12805 1350 DLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRG----------QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1350 GLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g----------~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
++++++|+|.||+ +++||.|+|||+|||+.. +.+++.|+.||+.||.+|.
T Consensus 256 -l~~~~~G~i~Vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 315 (452)
T 2cdu_A 256 -VAMLDNGAIITDE-YMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLT 315 (452)
T ss_dssp -SCBCTTSCBCCCT-TSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred -hhcCCCCCEEECC-CcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhC
Confidence 9998899999997 899999999999999873 3789999999999999985
No 51
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.68 E-value=1.2e-16 Score=193.35 Aligned_cols=182 Identities=15% Similarity=0.140 Sum_probs=148.0
Q ss_pred ceEEEccCCCCC-cCC---ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhhc
Q psy12805 1210 GFIKYSRETAPY-RPA---EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLIY 1279 (1429)
Q Consensus 1210 gf~kiAtGs~P~-~p~---~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lvf 1279 (1429)
.++.+|||+.|. .|+ ...+.++++++.+...+++++|+|+|.++++++..+...|++| ..+++.++.
T Consensus 156 d~lviAtG~~p~~~p~i~G~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~--- 232 (484)
T 3o0h_A 156 EKILIATGAKIVSNSAIKGSDLCLTSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDY--- 232 (484)
T ss_dssp EEEEECCCEEECCC--CBTGGGSBCTTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCH---
T ss_pred CEEEEccCCCcccCCCCCCccccccHHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCH---
Confidence 347899999888 653 3346777888888788999999999999999999999999988 345555555
Q ss_pred cchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-hhccCccccCC
Q psy12805 1280 HNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDPR 1356 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~~ 1356 (1429)
++.+.+.+.+++.| +.++.++.+++.. ++.+.. ...++ ++++||.||+|+|++|+...| ++.+|++++++
T Consensus 233 --~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~---~~~v~v-~~~~g-~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~ 305 (484)
T 3o0h_A 233 --DLRQLLNDAMVAKGISIIYEATVSQVQST---ENCYNV-VLTNG-QTICADRVMLATGRVPNTTGLGLERAGVKVNEF 305 (484)
T ss_dssp --HHHHHHHHHHHHHTCEEESSCCEEEEEEC---SSSEEE-EETTS-CEEEESEEEECCCEEECCTTCCHHHHTCCBCTT
T ss_pred --HHHHHHHHHHHHCCCEEEeCCEEEEEEee---CCEEEE-EECCC-cEEEcCEEEEeeCCCcCCCCCChhhcCceECCC
Confidence 88899999998888 5667888888652 333433 33333 479999999999999655444 78899999999
Q ss_pred CCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1357 SNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1357 G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
|+|.||+ +++|++|+|||+|||+..+.+++.|+.||+.||.+|..
T Consensus 306 G~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 350 (484)
T 3o0h_A 306 GAVVVDE-KMTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFE 350 (484)
T ss_dssp SCBCCCT-TSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC
T ss_pred CCEeECC-CCCCCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcC
Confidence 9999997 89999999999999999899999999999999999974
No 52
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.68 E-value=8e-17 Score=193.60 Aligned_cols=181 Identities=16% Similarity=0.195 Sum_probs=146.9
Q ss_pred ceEEEccCCCCCcCC----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhhc
Q psy12805 1210 GFIKYSRETAPYRPA----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLIY 1279 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lvf 1279 (1429)
.++.+|||+.|..|+ ..++.++++++++...+++++|+|+|.++||++..+++.|++| ..++|.+++
T Consensus 136 d~lviATGs~p~~~~~~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~--- 212 (458)
T 1lvl_A 136 EHLLLATGSSSVELPMLPLGGPVISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDS--- 212 (458)
T ss_dssp SEEEECCCEEECCBTTBCCBTTEECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCH---
T ss_pred CEEEEeCCCCCCCCCCCCccCcEecHHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCH---
Confidence 458899999987664 2257788999888777899999999999999999999999988 455665555
Q ss_pred cchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-hhccCccccCC
Q psy12805 1280 HNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDPR 1356 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~~ 1356 (1429)
++.+.+.+.+++.| +..+.++.+++. +.+.....+|+.+++++|.||+|+|++|+...+ ++.+|++++++
T Consensus 213 --~~~~~l~~~l~~~gv~i~~~~~v~~i~~-----~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~ 285 (458)
T 1lvl_A 213 --ELTAPVAESLKKLGIALHLGHSVEGYEN-----GCLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA 285 (458)
T ss_dssp --HHHHHHHHHHHHHTCEEETTCEEEEEET-----TEEEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT
T ss_pred --HHHHHHHHHHHHCCCEEEECCEEEEEEe-----CCEEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC
Confidence 88889999998888 566888888742 223322112433689999999999999654443 78899999887
Q ss_pred CCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1357 SNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1357 G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
+|.||+ +++|+.|+|||+|||+..+.+++.|..||+.||.+|..
T Consensus 286 -~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 286 -AIAIDE-RCQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp -EECCCT-TCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHTT
T ss_pred -EEeECC-CCcCCCCCEEEeeccCCCcccHHHHHHHHHHHHHHhcC
Confidence 899997 89999999999999999999999999999999999963
No 53
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.67 E-value=7.2e-17 Score=182.66 Aligned_cols=190 Identities=15% Similarity=0.093 Sum_probs=133.7
Q ss_pred cccccce--EEEccCCCCCcCCcc--------CccchHHHHhhccCCCceEEEcccc-ccccHHHHHHhCCCCccccccc
Q psy12805 1205 IDKTRGF--IKYSRETAPYRPAEK--------RLKDWDEIYATQHVRKGLRIQAARC-MECGVPFCQSSHGCPLGNIIPK 1273 (1429)
Q Consensus 1205 ~~k~~gf--~kiAtGs~P~~p~~~--------rv~D~~el~~l~~~pk~lvVIGaGc-IgcE~a~c~s~~Gc~V~~iLp~ 1273 (1429)
.++...| +.+|||+.|..|+.. .+.++.........+++++|+|+|. ++++++..+...|..|..+..
T Consensus 100 ~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~- 178 (304)
T 4fk1_A 100 DHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATN- 178 (304)
T ss_dssp TCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECS-
T ss_pred CCCEEEeCEEEEccCCccccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEec-
Confidence 3444444 789999999887422 2344444444444567788888775 456888888777877742221
Q ss_pred cchhhccchHHHHHHHHHHhCCCCC-CcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccCcc
Q psy12805 1274 WNDLIYHNNWSEALNQLLQTNNFPA-GIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELDLT 1352 (1429)
Q Consensus 1274 ~d~lvf~~e~~~al~~~Le~~G~~~-gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLe 1352 (1429)
.+ .+.+.+.+.|++.++.. ...+..+. .+++.+..+...+ .+++++|.+|+++|.+||+ .+++++|++
T Consensus 179 -~~-----~~~~~~~~~l~~~g~~~~~~~v~~~~---~~~~~~~~v~~~~-g~~i~~~~~vi~~g~~~~~-~~~~~~g~~ 247 (304)
T 4fk1_A 179 -GN-----ELSQTIMDELSNKNIPVITESIRTLQ---GEGGYLKKVEFHS-GLRIERAGGFIVPTFFRPN-QFIEQLGCE 247 (304)
T ss_dssp -SC-----CCCHHHHHHHHTTTCCEECSCEEEEE---SGGGCCCEEEETT-SCEECCCEEEECCEEECSS-CHHHHTTCC
T ss_pred -cc-----cchhhhhhhhhccceeEeeeeEEEee---cCCCeeeeeeccc-cceeeecceeeeeccccCC-hhhhhcCeE
Confidence 11 33455666777777431 11233332 2344444444444 3478899999988888665 578889999
Q ss_pred ccCCCCEEecCCCCccCCCCEEEeCCCCC-CCCcHHHHHHHHHHHHHHHHHHHhCC
Q psy12805 1353 LDPRSNYSTVEKTYLTTVPRVYAAGDCRR-GQSLVVWAISEGRQAAREIDSFLMGT 1407 (1429)
Q Consensus 1353 ld~~G~I~VD~~~~~TSvPgVFAAGD~a~-g~~lvv~Ai~qGr~AA~nI~~~L~g~ 1407 (1429)
++++|+|.||+ +++||+|+|||+|||+. ++.++++|+.+|+.||.+|+++|..+
T Consensus 248 ~~~~G~I~vd~-~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 248 LQSNGTFVIDD-FGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp CCTTSSSCSST-TCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCEEECc-CCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999997 89999999999999986 56789999999999999999999764
No 54
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.67 E-value=2.3e-16 Score=189.05 Aligned_cols=182 Identities=22% Similarity=0.289 Sum_probs=148.5
Q ss_pred ceEEEccCCCCCcCC-----ccCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------cccccccchhh
Q psy12805 1210 GFIKYSRETAPYRPA-----EKRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKWNDLI 1278 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~-----~~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~d~lv 1278 (1429)
.++.+|||+.|..|+ ..++.++++++++...|++++|+|+|.+++|++..++..|++| ..++|.++.
T Consensus 131 d~lviAtG~~p~~~~~~g~~~~~v~~~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~-- 208 (455)
T 2yqu_A 131 RYILIATGSAPLIPPWAQVDYERVVTSTEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDL-- 208 (455)
T ss_dssp EEEEECCCEEECCCTTBCCCSSSEECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCH--
T ss_pred cEEEECCCCCCCCCCCCCCCcCcEechHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCH--
Confidence 347799999887763 2357888998887777899999999999999999999999988 445665555
Q ss_pred ccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-hhccCccccC
Q psy12805 1279 YHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-ANELDLTLDP 1355 (1429)
Q Consensus 1279 f~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-le~lGLeld~ 1355 (1429)
++.+.+.+.++++| +.++.++.+++.. ++.+.. ...+ .+++++|.||+|+|++|+...+ ++.+|+++++
T Consensus 209 ---~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~---~~~v~v-~~~~-g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~ 280 (455)
T 2yqu_A 209 ---EVSRAAERVFKKQGLTIRTGVRVTAVVPE---AKGARV-ELEG-GEVLEADRVLVAVGRRPYTEGLSLENAGLSTDE 280 (455)
T ss_dssp ---HHHHHHHHHHHHHTCEEECSCCEEEEEEE---TTEEEE-EETT-SCEEEESEEEECSCEEECCTTCCGGGGTCCCCT
T ss_pred ---HHHHHHHHHHHHCCCEEEECCEEEEEEEe---CCEEEE-EECC-CeEEEcCEEEECcCCCcCCCCCChhhcCCccCC
Confidence 88888999998888 5668888888653 222332 2333 3479999999999999554433 7889999988
Q ss_pred CCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHH
Q psy12805 1356 RSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1356 ~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
+|+|.||+ +++|+.|+|||+|||+..+.+++.|..||+.||.+|..
T Consensus 281 ~g~i~vd~-~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 281 RGRIPVDE-HLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp TSCCCCCT-TSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEeECC-CcccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcC
Confidence 89999997 79999999999999999999999999999999999975
No 55
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.67 E-value=1.5e-16 Score=192.90 Aligned_cols=179 Identities=17% Similarity=0.263 Sum_probs=140.4
Q ss_pred cceEEEccCCCCCcCCc----------------cCcc------chHHHHhhc--cCCCceEEEccccccccHHHHHHhCC
Q psy12805 1209 RGFIKYSRETAPYRPAE----------------KRLK------DWDEIYATQ--HVRKGLRIQAARCMECGVPFCQSSHG 1264 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~~----------------~rv~------D~~el~~l~--~~pk~lvVIGaGcIgcE~a~c~s~~G 1264 (1429)
..++.+|||+.|..|+. .++. |.+++++.. ..+++++|+|+|.++||++..++..|
T Consensus 138 ~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g 217 (490)
T 2bc0_A 138 YDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKG 217 (490)
T ss_dssp CSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTT
T ss_pred CCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCC
Confidence 34688999999987731 1222 455666665 57899999999999999999999999
Q ss_pred CCc------ccccc-ccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEe
Q psy12805 1265 CPL------GNIIP-KWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLA 1335 (1429)
Q Consensus 1265 c~V------~~iLp-~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlA 1335 (1429)
++| ..+++ .++ .++.+.+.+.+++.| +.++.++++++. ++.+..+..++ ++++||.||+|
T Consensus 218 ~~Vtlv~~~~~~l~~~~~-----~~~~~~l~~~l~~~GV~i~~~~~v~~i~~----~~~v~~v~~~g--~~i~~D~Vi~a 286 (490)
T 2bc0_A 218 KEVVLIDVVDTCLAGYYD-----RDLTDLMAKNMEEHGIQLAFGETVKEVAG----NGKVEKIITDK--NEYDVDMVILA 286 (490)
T ss_dssp CEEEEEESSSSTTTTTSC-----HHHHHHHHHHHHTTTCEEEETCCEEEEEC----SSSCCEEEESS--CEEECSEEEEC
T ss_pred CeEEEEEcccchhhhHHH-----HHHHHHHHHHHHhCCeEEEeCCEEEEEEc----CCcEEEEEECC--cEEECCEEEEC
Confidence 998 34455 334 488999999999988 455777777753 33332233343 47999999999
Q ss_pred ccccCchhhhhhccCccccCCCCEEecCCCCccCCCCEEEeCCCCCC----------CCcHHHHHHHHHHHHHHHH
Q psy12805 1336 MGFLGPERYIANELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRG----------QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1336 iG~~pp~~~Lle~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g----------~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+|++| +..+++.+ ++++++|+|.||+ +++|+.|+|||+|||+.. +.+++.|+.||+.||.+|.
T Consensus 287 ~G~~p-~~~ll~~~-l~~~~~G~I~Vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 359 (490)
T 2bc0_A 287 VGFRP-NTTLGNGK-IDLFRNGAFLVNK-RQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNAC 359 (490)
T ss_dssp CCEEE-CCGGGTTC-SCBCTTSCBCCCT-TCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCc-ChHHHHhh-hccCCCCCEEECC-CcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 99994 55677777 8888899999997 899999999999999873 3689999999999999996
No 56
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.66 E-value=1.2e-16 Score=191.60 Aligned_cols=178 Identities=14% Similarity=0.162 Sum_probs=138.2
Q ss_pred ceEEEccCCCCCcCCc-----cCcc------chHHHHhhccCCCceEEEccccccccHHHHHHhCCCCc------ccccc
Q psy12805 1210 GFIKYSRETAPYRPAE-----KRLK------DWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIP 1272 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~-----~rv~------D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp 1272 (1429)
.++.+|||+.|..|+. ..+. +.+++++....+++++|+|+|+++||++..++.+|++| ..+++
T Consensus 105 d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 184 (452)
T 3oc4_A 105 DKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP 184 (452)
T ss_dssp SEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc
Confidence 4588999999987732 2222 33455555667899999999999999999999999998 34444
Q ss_pred c-cchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhcc
Q psy12805 1273 K-WNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANEL 1349 (1429)
Q Consensus 1273 ~-~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~l 1349 (1429)
. ++. ++.+.+.+.+++.| +.++.++.+++. .++.+. +..+++ +++||.||+|+|++| +..+++..
T Consensus 185 ~~~d~-----~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~~v~-v~~~~g--~i~aD~Vv~A~G~~p-~~~~l~~~ 252 (452)
T 3oc4_A 185 KYFDK-----EMVAEVQKSLEKQAVIFHFEETVLGIEE---TANGIV-LETSEQ--EISCDSGIFALNLHP-QLAYLDKK 252 (452)
T ss_dssp TTCCH-----HHHHHHHHHHHTTTEEEEETCCEEEEEE---CSSCEE-EEESSC--EEEESEEEECSCCBC-CCSSCCTT
T ss_pred ccCCH-----HHHHHHHHHHHHcCCEEEeCCEEEEEEc---cCCeEE-EEECCC--EEEeCEEEECcCCCC-ChHHHHhh
Confidence 3 344 89999999999988 566788888864 234442 333443 799999999999994 55666654
Q ss_pred CccccCCCCEEecCCCCccCCCCEEEeCCCCCCC----------CcHHHHHHHHHHHHHHHH
Q psy12805 1350 DLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQ----------SLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1350 GLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~----------~lvv~Ai~qGr~AA~nI~ 1401 (1429)
++++++|+|.||+ +++||.|+|||+|||+..+ ++++.|+.||+.||.+|.
T Consensus 253 -~~~~~~g~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 312 (452)
T 3oc4_A 253 -IQRNLDQTIAVDA-YLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLE 312 (452)
T ss_dssp -SCBCTTSCBCCCT-TCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSS
T ss_pred -hccCCCCCEEECc-CccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 8899999999997 8999999999999998753 689999999999999885
No 57
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.66 E-value=2e-16 Score=190.82 Aligned_cols=162 Identities=25% Similarity=0.324 Sum_probs=121.0
Q ss_pred CCCceEEEccccccccHHHHHHhCCCC-cccc-------ccccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEE--
Q psy12805 1240 VRKGLRIQAARCMECGVPFCQSSHGCP-LGNI-------IPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEW-- 1307 (1429)
Q Consensus 1240 ~pk~lvVIGaGcIgcE~a~c~s~~Gc~-V~~i-------Lp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~-- 1307 (1429)
.+++++|+|+|.++++++..+.+.|++ |..+ +|.+.. .+ +.+++.| |..+..++++..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~---------e~-~~~~~~Gv~~~~~~~~~~i~~~g 332 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQR---------EV-AHAEEEGVEFIWQAAPEGFTGDT 332 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHH---------HH-HHHHHTTCEEECCSSSCCEEEEE
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHH---------HH-HHHHHCCCEEEeCCCceEEeCCC
Confidence 468999999999999999988888885 6332 232221 12 2345556 333333333321
Q ss_pred ------------e-ecCCCceEEEEeCCCeeEEEecEEEEeccccCchhh-hhhccCccccCCCCEEecCCCCccCCCCE
Q psy12805 1308 ------------T-KDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERY-IANELDLTLDPRSNYSTVEKTYLTTVPRV 1373 (1429)
Q Consensus 1308 ------------~-k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~-Lle~lGLeld~~G~I~VD~~~~~TSvPgV 1373 (1429)
. .+.+|++..+..+|++++++||+||+|+|+.|+... +++.+|++++++|+|.||+..++||.|+|
T Consensus 333 ~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~V 412 (456)
T 2vdc_G 333 VVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGV 412 (456)
T ss_dssp EEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTE
T ss_pred cEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCE
Confidence 0 123444444444566678999999999999954444 78899999999999999984489999999
Q ss_pred EEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCCCC
Q psy12805 1374 YAAGDCRRGQSLVVWAISEGRQAAREIDSFLMGTSTLP 1411 (1429)
Q Consensus 1374 FAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g~~~~p 1411 (1429)
||+|||+.++.++++|+.+|+.||.+|+.+|++++..|
T Consensus 413 fA~GD~~~g~~~v~~A~~~G~~aA~~i~~~L~~~~~~~ 450 (456)
T 2vdc_G 413 FAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAKAEAP 450 (456)
T ss_dssp EECGGGGSSCCSHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEeccccCCchHHHHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 99999999999999999999999999999999876554
No 58
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.65 E-value=7.5e-16 Score=174.56 Aligned_cols=188 Identities=17% Similarity=0.135 Sum_probs=136.3
Q ss_pred ceEEEccCCCCCcCCcc--------CccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCccccccccchhhccc
Q psy12805 1210 GFIKYSRETAPYRPAEK--------RLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHN 1281 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~--------rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~ 1281 (1429)
.++.+|+|+.|..|... .+..+.........+++++|+|+|.+++|++..+...|++|..+.+.- .+..
T Consensus 116 ~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~-~~~~-- 192 (319)
T 3cty_A 116 KYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP-KYMC-- 192 (319)
T ss_dssp EEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS-SCCS--
T ss_pred CEEEECCCCCcccCCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC-ccCC--
Confidence 45889999888766321 122222233333456899999999999999999998888885443321 1111
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEe----CCCeeEEEecEEEEeccccCchhhhhhccCccccC
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEV----PNSEKIFKCDLVLLAMGFLGPERYIANELDLTLDP 1355 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~----~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~ 1355 (1429)
...+.+.+.+.| +..+.++.++... ++++..+.+ +|+.++++||.||+|+|+. |+..+++.+|+++++
T Consensus 193 --~~~l~~~l~~~gv~i~~~~~v~~i~~~---~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~-p~~~~l~~~gl~~~~ 266 (319)
T 3cty_A 193 --ENAYVQEIKKRNIPYIMNAQVTEIVGD---GKKVTGVKYKDRTTGEEKLIETDGVFIYVGLI-PQTSFLKDSGVKLDE 266 (319)
T ss_dssp --CHHHHHHHHHTTCCEECSEEEEEEEES---SSSEEEEEEEETTTCCEEEECCSEEEECCCEE-ECCGGGTTSCCCBCT
T ss_pred --CHHHHHHHhcCCcEEEcCCeEEEEecC---CceEEEEEEEEcCCCceEEEecCEEEEeeCCc-cChHHHhhccccccC
Confidence 122344455667 4567788888642 332222222 4555689999999999999 556788889999999
Q ss_pred CCCEEecCCCCccCCCCEEEeCCCCCC-CCcHHHHHHHHHHHHHHHHHHHhCC
Q psy12805 1356 RSNYSTVEKTYLTTVPRVYAAGDCRRG-QSLVVWAISEGRQAAREIDSFLMGT 1407 (1429)
Q Consensus 1356 ~G~I~VD~~~~~TSvPgVFAAGD~a~g-~~lvv~Ai~qGr~AA~nI~~~L~g~ 1407 (1429)
+|+|.||+ +++|+.|+|||+|||+.. +.+++.|+.||+.||.+|.++|.++
T Consensus 267 ~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 318 (319)
T 3cty_A 267 RGYIVVDS-RQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSISK 318 (319)
T ss_dssp TSCBCCCT-TCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CccEeCCC-CCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999997 799999999999999986 5789999999999999999999764
No 59
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.64 E-value=8.2e-16 Score=185.90 Aligned_cols=180 Identities=17% Similarity=0.180 Sum_probs=141.6
Q ss_pred cceEEEccCCCCCcCCc-----cC---ccchHHHHhhcc-----CCCceEEEccccccccHHHHHHhCCCCc------cc
Q psy12805 1209 RGFIKYSRETAPYRPAE-----KR---LKDWDEIYATQH-----VRKGLRIQAARCMECGVPFCQSSHGCPL------GN 1269 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~~-----~r---v~D~~el~~l~~-----~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~ 1269 (1429)
..++.+|||+.|..|+. .. ..++++..++.. .+++++|+|+|.+++|++..++..|++| ..
T Consensus 141 ~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 141 YDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred cCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 34588999999987632 22 235666655533 7899999999999999999999999988 34
Q ss_pred cccccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhh
Q psy12805 1270 IIPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIAN 1347 (1429)
Q Consensus 1270 iLp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle 1347 (1429)
+++.++. ++.+.+.+.+++.| +.++.++.+++. ++.+..+..++ .+++||.||+|+|++ |+..+++
T Consensus 221 ~l~~~~~-----~~~~~l~~~l~~~Gv~i~~~~~v~~i~~----~~~v~~v~~~~--~~i~~D~vi~a~G~~-p~~~~l~ 288 (480)
T 3cgb_A 221 IGTIYDG-----DMAEYIYKEADKHHIEILTNENVKAFKG----NERVEAVETDK--GTYKADLVLVSVGVK-PNTDFLE 288 (480)
T ss_dssp TTSSSCH-----HHHHHHHHHHHHTTCEEECSCCEEEEEE----SSBEEEEEETT--EEEECSEEEECSCEE-ESCGGGT
T ss_pred hhhcCCH-----HHHHHHHHHHHHcCcEEEcCCEEEEEEc----CCcEEEEEECC--CEEEcCEEEECcCCC-cChHHHH
Confidence 4444444 88899999999988 456778888854 23333233333 379999999999999 5556889
Q ss_pred ccCccccCCCCEEecCCCCccCCCCEEEeCCCCCC----------CCcHHHHHHHHHHHHHHHH
Q psy12805 1348 ELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRG----------QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1348 ~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g----------~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
.+|++++++|+|.||+ +++|+.|+|||+|||+.. +++++.|..||+.||.+|.
T Consensus 289 ~~g~~~~~~G~I~Vd~-~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 351 (480)
T 3cgb_A 289 GTNIRTNHKGAIEVNA-YMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNML 351 (480)
T ss_dssp TSCCCBCTTSCBCCCT-TSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred hCCcccCCCCCEEECC-CccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhc
Confidence 9999999999999997 899999999999999842 2679999999999999986
No 60
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.64 E-value=1.6e-15 Score=170.78 Aligned_cols=188 Identities=14% Similarity=0.071 Sum_probs=134.9
Q ss_pred ceEEEccCCCCCcCCcc--------CccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCccccccccchhhccc
Q psy12805 1210 GFIKYSRETAPYRPAEK--------RLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHN 1281 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~--------rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~ 1281 (1429)
.++.+|+|+.|..|+.. .+..+..........++++|+|+|.++||++..++..|++|..+-+.- .+.+..
T Consensus 104 ~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~~ 182 (311)
T 2q0l_A 104 KSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD-GFRCAP 182 (311)
T ss_dssp EEEEECCCEEECCCCCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS-SCCSCH
T ss_pred CEEEECCCCCCCCCCCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC-ccCCCH
Confidence 34789999988776422 122233333334457899999999999999999999998885333221 111111
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCce-EEEEe---CCCeeEEEecEEEEeccccCchhhhhhccC----c
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRW-KMDEV---PNSEKIFKCDLVLLAMGFLGPERYIANELD----L 1351 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~-~~v~~---~gse~~ieaDlVLlAiG~~pp~~~Lle~lG----L 1351 (1429)
. ..++++++.| +..+..+.+++.. ++.+ ..... +|+.++++||.||+++|++ |+..+++.++ +
T Consensus 183 ~---~~~~l~~~~gv~v~~~~~v~~i~~~---~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~-p~~~~l~~~g~~~~l 255 (311)
T 2q0l_A 183 I---TLEHAKNNDKIEFLTPYVVEEIKGD---ASGVSSLSIKNTATNEKRELVVPGFFIFVGYD-VNNAVLKQEDNSMLC 255 (311)
T ss_dssp H---HHHHHHTCTTEEEETTEEEEEEEEE---TTEEEEEEEEETTTCCEEEEECSEEEECSCEE-ECCGGGBCTTSCBSS
T ss_pred H---HHHHHhhCCCeEEEeCCEEEEEECC---CCcEeEEEEEecCCCceEEEecCEEEEEecCc-cChhhhhccccccee
Confidence 2 2233333456 4567788887542 2322 12222 4555689999999999999 5556777775 8
Q ss_pred cccCCCCEEecCCCCccCCCCEEEeCCCCCC-CCcHHHHHHHHHHHHHHHHHHHhC
Q psy12805 1352 TLDPRSNYSTVEKTYLTTVPRVYAAGDCRRG-QSLVVWAISEGRQAAREIDSFLMG 1406 (1429)
Q Consensus 1352 eld~~G~I~VD~~~~~TSvPgVFAAGD~a~g-~~lvv~Ai~qGr~AA~nI~~~L~g 1406 (1429)
+++++|+|.||+ +++|+.|+|||+|||+.. +.+++.|+.||+.||.+|.++|.+
T Consensus 256 ~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 310 (311)
T 2q0l_A 256 KCDEYGSIVVDF-SMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEH 310 (311)
T ss_dssp CBCTTSCBCCCT-TCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EeccCCCEEeCC-ccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHHHHhh
Confidence 999899999997 899999999999999986 689999999999999999999975
No 61
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.64 E-value=1.4e-15 Score=171.27 Aligned_cols=188 Identities=13% Similarity=0.068 Sum_probs=135.7
Q ss_pred ceEEEccCCCCCcCCc--------cCccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCccccccccchhhccc
Q psy12805 1210 GFIKYSRETAPYRPAE--------KRLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHN 1281 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~--------~rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~ 1281 (1429)
.++.+|+|+.|..|+. ..+..++........+++++|+|+|.++||++..++..|.+|..+-+.- .+.+
T Consensus 105 ~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~-- 181 (310)
T 1fl2_A 105 RSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP-EMKA-- 181 (310)
T ss_dssp EEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS-SCCS--
T ss_pred CEEEECcCCCcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc-ccCc--
Confidence 3488999988876532 1233444444444567999999999999999999998888874332221 1111
Q ss_pred hHHHHHHHHHHh-CC--CCCCcEEEEEEEeecCCCceE-EEEe---CCCeeEEEecEEEEeccccCchhhhhhccCcccc
Q psy12805 1282 NWSEALNQLLQT-NN--FPAGIKTVKVEWTKDATGRWK-MDEV---PNSEKIFKCDLVLLAMGFLGPERYIANELDLTLD 1354 (1429)
Q Consensus 1282 e~~~al~~~Le~-~G--~~~gv~v~~Ve~~k~~~G~~~-~v~~---~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld 1354 (1429)
.+.+.+.+++ .| +..+.++.++.. +++++. .... +++..++++|.|++|+|++| +..++++. ++++
T Consensus 182 --~~~~~~~l~~~~gv~v~~~~~v~~i~~---~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p-~~~~l~~~-l~~~ 254 (310)
T 1fl2_A 182 --DQVLQDKLRSLKNVDIILNAQTTEVKG---DGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLP-NTNWLEGA-VERN 254 (310)
T ss_dssp --CHHHHHHHHTCTTEEEESSEEEEEEEE---SSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE-SCGGGTTT-SCBC
T ss_pred --cHHHHHHHhhCCCeEEecCCceEEEEc---CCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCcc-CchHHhcc-cccc
Confidence 1334455555 46 556778888754 234432 2221 24556899999999999994 55676654 8888
Q ss_pred CCCCEEecCCCCccCCCCEEEeCCCCCCC-CcHHHHHHHHHHHHHHHHHHHhCCC
Q psy12805 1355 PRSNYSTVEKTYLTTVPRVYAAGDCRRGQ-SLVVWAISEGRQAAREIDSFLMGTS 1408 (1429)
Q Consensus 1355 ~~G~I~VD~~~~~TSvPgVFAAGD~a~g~-~lvv~Ai~qGr~AA~nI~~~L~g~~ 1408 (1429)
++|+|.||+ +++|+.|+|||+|||+..+ .++..|+.+|+.||.+|.++|.+++
T Consensus 255 ~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 308 (310)
T 1fl2_A 255 RMGEIIIDA-KCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTK 308 (310)
T ss_dssp TTSCBCCCT-TCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCcEEcCC-CCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHHHHhc
Confidence 899999997 7899999999999999865 6899999999999999999998765
No 62
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.64 E-value=1.5e-15 Score=170.58 Aligned_cols=190 Identities=15% Similarity=0.073 Sum_probs=137.8
Q ss_pred ceEEEccCCCCCcCCcc--------CccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCccccccccchhhccc
Q psy12805 1210 GFIKYSRETAPYRPAEK--------RLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHN 1281 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~--------rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~ 1281 (1429)
.++.+|+|+.|..|... .+..+.........+++++|+|+|.++++++..+...|++|..+.+.... ..
T Consensus 115 d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~--~~- 191 (323)
T 3f8d_A 115 DSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTF--KA- 191 (323)
T ss_dssp EEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSC--CS-
T ss_pred CEEEECcCCCCccCCCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCC--Cc-
Confidence 34789999988776321 12122222223346789999999999999999999889888433332111 11
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceE-EEEeC---CCeeEEEecEEEEeccccCchhhhhhccCccccC
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWK-MDEVP---NSEKIFKCDLVLLAMGFLGPERYIANELDLTLDP 1355 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~-~v~~~---gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~ 1355 (1429)
..+.++++++..| +..+..+.+++.. +... ....+ |+.+++++|.|++++|++ |+..+++.+|+++++
T Consensus 192 -~~~~~~~~~~~~gv~~~~~~~v~~i~~~----~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~-p~~~~~~~~g~~~~~ 265 (323)
T 3f8d_A 192 -QPIYVETVKKKPNVEFVLNSVVKEIKGD----KVVKQVVVENLKTGEIKELNVNGVFIEIGFD-PPTDFAKSNGIETDT 265 (323)
T ss_dssp -CHHHHHHHHTCTTEEEECSEEEEEEEES----SSEEEEEEEETTTCCEEEEECSEEEECCCEE-CCHHHHHHTTCCBCT
T ss_pred -CHHHHHHHHhCCCcEEEeCCEEEEEecc----CceeEEEEEECCCCceEEEEcCEEEEEECCC-CChhHHhhcCeeecC
Confidence 1233444555556 5667778777542 3222 22222 555689999999999999 455688999999999
Q ss_pred CCCEEecCCCCccCCCCEEEeCCCCCC---CCcHHHHHHHHHHHHHHHHHHHhCCCC
Q psy12805 1356 RSNYSTVEKTYLTTVPRVYAAGDCRRG---QSLVVWAISEGRQAAREIDSFLMGTST 1409 (1429)
Q Consensus 1356 ~G~I~VD~~~~~TSvPgVFAAGD~a~g---~~lvv~Ai~qGr~AA~nI~~~L~g~~~ 1409 (1429)
+|+|.||+ +++|+.|+|||+|||+.. +.++..|+.+|+.||.+|.++|.++..
T Consensus 266 ~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 321 (323)
T 3f8d_A 266 NGYIKVDE-WMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKKG 321 (323)
T ss_dssp TSSBCCCT-TCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCcEecCC-CceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHHHHHhhc
Confidence 99999997 899999999999999985 789999999999999999999988654
No 63
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.63 E-value=1.1e-15 Score=184.13 Aligned_cols=181 Identities=23% Similarity=0.293 Sum_probs=141.0
Q ss_pred cceEEEccCCCCCcCCc-----cC---ccchHHHHhhc-----cCCCceEEEccccccccHHHHHHhC-CCCc------c
Q psy12805 1209 RGFIKYSRETAPYRPAE-----KR---LKDWDEIYATQ-----HVRKGLRIQAARCMECGVPFCQSSH-GCPL------G 1268 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~~-----~r---v~D~~el~~l~-----~~pk~lvVIGaGcIgcE~a~c~s~~-Gc~V------~ 1268 (1429)
..++.+|||+.|..|+. .. ..+.++...+. ..+++++|+|+|.++||++..+... |++| .
T Consensus 114 ~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~ 193 (472)
T 3iwa_A 114 YDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD 193 (472)
T ss_dssp CSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS
T ss_pred CCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC
Confidence 34588999999887632 11 23445544443 3579999999999999999999998 9988 3
Q ss_pred cccc-ccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh
Q psy12805 1269 NIIP-KWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI 1345 (1429)
Q Consensus 1269 ~iLp-~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L 1345 (1429)
.++| .+++ ++.+.+.+.+++.| +..+.++.+++. .++.+.....++ ++++||.||+|+|++ |+..|
T Consensus 194 ~~l~~~~~~-----~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~~v~v~~~~g--~~i~aD~Vv~a~G~~-p~~~l 262 (472)
T 3iwa_A 194 QIMPGFTSK-----SLSQMLRHDLEKNDVVVHTGEKVVRLEG---ENGKVARVITDK--RTLDADLVILAAGVS-PNTQL 262 (472)
T ss_dssp SSSTTTSCH-----HHHHHHHHHHHHTTCEEECSCCEEEEEE---SSSBEEEEEESS--CEEECSEEEECSCEE-ECCHH
T ss_pred cccccccCH-----HHHHHHHHHHHhcCCEEEeCCEEEEEEc---cCCeEEEEEeCC--CEEEcCEEEECCCCC-cCHHH
Confidence 4455 4444 88999999999988 556778888854 245544333333 379999999999999 45568
Q ss_pred hhccCccccCCCCEEecCCCCccCCCCEEEeCCCCC-------C---CCcHHHHHHHHHHHHHHHH
Q psy12805 1346 ANELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRR-------G---QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1346 le~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~-------g---~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
++.+|++++++|+|.||+ +++|+.|+|||+|||+. . +++++.|..||+.||.+|.
T Consensus 263 ~~~~gl~~~~~g~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 327 (472)
T 3iwa_A 263 ARDAGLELDPRGAIIVDT-RMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLA 327 (472)
T ss_dssp HHHHTCCBCTTCCEECCT-TCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHT
T ss_pred HHhCCccCCCCCCEEECC-CcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 888999999999999997 89999999999999983 2 3588999999999999986
No 64
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.63 E-value=1.5e-15 Score=170.26 Aligned_cols=189 Identities=12% Similarity=0.026 Sum_probs=138.9
Q ss_pred ceEEEccCCCCCcCCcc--------CccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCccccccccchhhccc
Q psy12805 1210 GFIKYSRETAPYRPAEK--------RLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHN 1281 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~--------rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~ 1281 (1429)
.++.+|||+.|..|... .+.+..........+++++|+|+|.++++++..+...|++|..+-+.-.. .
T Consensus 108 d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~----~ 183 (315)
T 3r9u_A 108 KAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF----R 183 (315)
T ss_dssp EEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC----B
T ss_pred CEEEEeeCCCCCCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC----C
Confidence 44789999988776322 22333444444456799999999999999999999889887433222110 1
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEE-Ee--CCCeeEEEecEEEEeccccCchhhhhhc---cC-cc
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMD-EV--PNSEKIFKCDLVLLAMGFLGPERYIANE---LD-LT 1352 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v-~~--~gse~~ieaDlVLlAiG~~pp~~~Lle~---lG-Le 1352 (1429)
...+.+.+++++.| +..+..+.+++.. +++...+ .. +|+..++++|.|++++|++| +..+++. +| ++
T Consensus 184 ~~~~~~~~~~~~~gv~~~~~~~v~~i~~~---~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p-~~~~~~~~~~~g~l~ 259 (315)
T 3r9u_A 184 AAPSTVEKVKKNEKIELITSASVDEVYGD---KMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNV-RNEILKQDDSKFLCN 259 (315)
T ss_dssp SCHHHHHHHHHCTTEEEECSCEEEEEEEE---TTEEEEEEEECTTSCEEEECCSCEEECSCEEE-CCGGGBCTTSCBSSC
T ss_pred CCHHHHHHHHhcCCeEEEeCcEEEEEEcC---CCcEEEEEEEcCCCCeEEeecCeEEEEEcCCC-Cchhhhcccccceee
Confidence 12344556666777 5667888888653 3332222 22 45556899999999999995 5556544 66 99
Q ss_pred ccCCCCEEecCCCCccCCCCEEEeCCCCC-CCCcHHHHHHHHHHHHHHHHHHHhCC
Q psy12805 1353 LDPRSNYSTVEKTYLTTVPRVYAAGDCRR-GQSLVVWAISEGRQAAREIDSFLMGT 1407 (1429)
Q Consensus 1353 ld~~G~I~VD~~~~~TSvPgVFAAGD~a~-g~~lvv~Ai~qGr~AA~nI~~~L~g~ 1407 (1429)
++++|+|.||+ +++|+.|+|||+|||+. .+.++..|+.+|+.||.+|.++|.++
T Consensus 260 ~~~~g~i~vd~-~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 314 (315)
T 3r9u_A 260 MEEGGQVSVDL-KMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESL 314 (315)
T ss_dssp BCTTSCBCCCT-TCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ecCCCcEEeCC-CcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHHHHHhc
Confidence 99999999998 89999999999999985 57899999999999999999999864
No 65
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.63 E-value=1.3e-15 Score=186.78 Aligned_cols=184 Identities=17% Similarity=0.230 Sum_probs=139.7
Q ss_pred cceEEEccCCCCCcCCc-----cCc---cch---HHHHh--hccCCCceEEEccccccccHHHHHHhCCCCc------cc
Q psy12805 1209 RGFIKYSRETAPYRPAE-----KRL---KDW---DEIYA--TQHVRKGLRIQAARCMECGVPFCQSSHGCPL------GN 1269 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~~-----~rv---~D~---~el~~--l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~ 1269 (1429)
..++.+|||+.|..|+. ..+ .+. +.+.+ ....+++++|+|+|++++|++..+...|++| ..
T Consensus 106 ~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 106 YDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp CSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 34588999998887632 122 222 22322 1145789999999999999999999999988 44
Q ss_pred cccccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeec----------------CCCceEEEEeCCCeeEEEecE
Q psy12805 1270 IIPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKD----------------ATGRWKMDEVPNSEKIFKCDL 1331 (1429)
Q Consensus 1270 iLp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~----------------~~G~~~~v~~~gse~~ieaDl 1331 (1429)
++|.++. ++.+.+.+.+++.| +.++..+.+++.... .++.+..+. .+ .++++||.
T Consensus 186 ~l~~~~~-----~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~-g~~i~~D~ 258 (565)
T 3ntd_A 186 VMTPVDR-----EMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTL-SN-GELLETDL 258 (565)
T ss_dssp SCTTSCH-----HHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEE-TT-SCEEEESE
T ss_pred cchhcCH-----HHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEE-cC-CCEEEcCE
Confidence 5555554 88899999999988 455778888865210 234443333 33 34799999
Q ss_pred EEEeccccCchhhhhhccCccccCCCCEEecCCCCccCCCCEEEeCCCCC------C----CCcHHHHHHHHHHHHHHHH
Q psy12805 1332 VLLAMGFLGPERYIANELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRR------G----QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1332 VLlAiG~~pp~~~Lle~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~------g----~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
||+|+|++| +..+++.+|++++++|+|.||+ +++||.|+|||+|||+. + +++++.|..||+.||.+|.
T Consensus 259 vi~a~G~~p-~~~l~~~~g~~~~~~g~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 336 (565)
T 3ntd_A 259 LIMAIGVRP-ETQLARDAGLAIGELGGIKVNA-MMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMF 336 (565)
T ss_dssp EEECSCEEE-CCHHHHHHTCCBCTTSSBCCCT-TCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred EEECcCCcc-chHHHHhCCcccCCCCCEEECC-CcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 999999994 5568888999999999999997 89999999999999983 2 3589999999999999986
No 66
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.62 E-value=8.5e-16 Score=182.02 Aligned_cols=185 Identities=17% Similarity=0.135 Sum_probs=138.5
Q ss_pred cceEEEccCCCCCcCCc-----cC---ccchHHHHhh---ccCCCceEEEccccccccHHHHHHhCCCCccccccc--cc
Q psy12805 1209 RGFIKYSRETAPYRPAE-----KR---LKDWDEIYAT---QHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPK--WN 1275 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~~-----~r---v~D~~el~~l---~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~--~d 1275 (1429)
..++.+|||+.|..|+. .. +.++++...+ ...+++++|+|+|.++||++..+...|++|..+-+. +.
T Consensus 100 ~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 179 (410)
T 3ef6_A 100 ADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL 179 (410)
T ss_dssp CSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 34588999999887621 11 2355554433 345799999999999999999999999998433221 12
Q ss_pred hhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccCccc
Q psy12805 1276 DLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELDLTL 1353 (1429)
Q Consensus 1276 ~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLel 1353 (1429)
...+..++.+.+.+.++++| +.++..+.+++. ++....+.+.++ ++++||.||+|+|++ |+..+++.+|+++
T Consensus 180 ~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~----~~~~~~v~~~dg-~~i~aD~Vv~a~G~~-p~~~l~~~~gl~~ 253 (410)
T 3ef6_A 180 VRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSG----EGQLEQVMASDG-RSFVADSALICVGAE-PADQLARQAGLAC 253 (410)
T ss_dssp HHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEEC----SSSCCEEEETTS-CEEECSEEEECSCEE-ECCHHHHHTTCCB
T ss_pred hhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEec----cCcEEEEEECCC-CEEEcCEEEEeeCCe-ecHHHHHhCCCcc
Confidence 22344588999999999888 556788888854 222222334333 479999999999999 5667899999999
Q ss_pred cCCCCEEecCCCCccCCCCEEEeCCCCCCC---------CcHHHHHHHHHHHHHHHHH
Q psy12805 1354 DPRSNYSTVEKTYLTTVPRVYAAGDCRRGQ---------SLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1354 d~~G~I~VD~~~~~TSvPgVFAAGD~a~g~---------~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
+ +| |.||+ +++|+.|+|||+|||+..+ .+++.|..||+.||.+|..
T Consensus 254 ~-~g-i~vd~-~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 308 (410)
T 3ef6_A 254 D-RG-VIVDH-CGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILG 308 (410)
T ss_dssp S-SS-EECCT-TSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred C-Ce-EEEcc-CeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcC
Confidence 8 55 99997 8899999999999998643 3489999999999999963
No 67
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.62 E-value=2.9e-15 Score=170.24 Aligned_cols=189 Identities=11% Similarity=0.077 Sum_probs=135.2
Q ss_pred ceEEEccCCCCCcCCcc--------CccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCccccccccchhhccc
Q psy12805 1210 GFIKYSRETAPYRPAEK--------RLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHN 1281 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~--------rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~ 1281 (1429)
.++.+|+|+.|..|... .+..+.........+++++|+|+|.++||++..++..|++|..+.+.-. +.+.
T Consensus 113 ~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~~- 190 (325)
T 2q7v_A 113 KAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT-LRAN- 190 (325)
T ss_dssp EEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS-CCSC-
T ss_pred CEEEECcCCCcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc-CCcc-
Confidence 45889999988766321 1222233333344578999999999999999999988988854433211 1111
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCce-EEEEe---CCCeeEEEecEEEEeccccCchhhhhhccCccccC
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRW-KMDEV---PNSEKIFKCDLVLLAMGFLGPERYIANELDLTLDP 1355 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~-~~v~~---~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~ 1355 (1429)
....+++++..| +..+.+++++.. ++.. ..... +|+.++++||.||+|+|++ |+..+++.+ +++++
T Consensus 191 --~~~~~~l~~~~gv~i~~~~~v~~i~~----~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~-p~~~~l~~~-~~~~~ 262 (325)
T 2q7v_A 191 --KVAQARAFANPKMKFIWDTAVEEIQG----ADSVSGVKLRNLKTGEVSELATDGVFIFIGHV-PNTAFVKDT-VSLRD 262 (325)
T ss_dssp --HHHHHHHHTCTTEEEECSEEEEEEEE----SSSEEEEEEEETTTCCEEEEECSEEEECSCEE-ESCGGGTTT-SCBCT
T ss_pred --hHHHHHHHhcCCceEecCCceEEEcc----CCcEEEEEEEECCCCcEEEEEcCEEEEccCCC-CChHHHhhh-cccCC
Confidence 122334444456 556778888854 2332 12222 4555689999999999999 555677777 88888
Q ss_pred CCCEEecCCCCccCCCCEEEeCCCCCC-CCcHHHHHHHHHHHHHHHHHHHhCCCC
Q psy12805 1356 RSNYSTVEKTYLTTVPRVYAAGDCRRG-QSLVVWAISEGRQAAREIDSFLMGTST 1409 (1429)
Q Consensus 1356 ~G~I~VD~~~~~TSvPgVFAAGD~a~g-~~lvv~Ai~qGr~AA~nI~~~L~g~~~ 1409 (1429)
+|+|.||+ +++|+.|+|||+|||+.. +.++..|+.||+.||.+|.++|.++..
T Consensus 263 ~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 316 (325)
T 2q7v_A 263 DGYVDVRD-EIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQLAALEV 316 (325)
T ss_dssp TSCBCCBT-TTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CccEecCC-CCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999997 799999999999999986 689999999999999999999988654
No 68
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.62 E-value=7.1e-16 Score=180.49 Aligned_cols=172 Identities=12% Similarity=0.136 Sum_probs=133.9
Q ss_pred ceEEEccCCCCCcCCc---cC---ccchHHHHhhcc---CCCceEEEccccccccHHHHHHhCCCCc------ccccccc
Q psy12805 1210 GFIKYSRETAPYRPAE---KR---LKDWDEIYATQH---VRKGLRIQAARCMECGVPFCQSSHGCPL------GNIIPKW 1274 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~---~r---v~D~~el~~l~~---~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~iLp~~ 1274 (1429)
.++.+|||+.|..|+. .. ..+.+++.++.. .+++++|+|+|.++||++..++..|++| +.++| +
T Consensus 103 d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~ 181 (367)
T 1xhc_A 103 DTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-L 181 (367)
T ss_dssp SEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-C
T ss_pred CEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-C
Confidence 4488999999987742 22 235555554422 3589999999999999999999999998 34455 4
Q ss_pred chhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccCcc
Q psy12805 1275 NDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELDLT 1352 (1429)
Q Consensus 1275 d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLe 1352 (1429)
+ .++.+.+.+.++++| +.++.++.+++ ... +.+.+ .+ +++|.|++|+|++| +..|++++|++
T Consensus 182 ~-----~~~~~~l~~~l~~~gV~i~~~~~v~~i~-----~~~---v~~~~-g~-i~~D~vi~a~G~~p-~~~ll~~~gl~ 245 (367)
T 1xhc_A 182 D-----EELSNMIKDMLEETGVKFFLNSELLEAN-----EEG---VLTNS-GF-IEGKVKICAIGIVP-NVDLARRSGIH 245 (367)
T ss_dssp C-----HHHHHHHHHHHHHTTEEEECSCCEEEEC-----SSE---EEETT-EE-EECSCEEEECCEEE-CCHHHHHTTCC
T ss_pred C-----HHHHHHHHHHHHHCCCEEEcCCEEEEEE-----eeE---EEECC-CE-EEcCEEEECcCCCc-CHHHHHhCCCC
Confidence 4 488999999999998 56677777774 111 23333 34 99999999999995 45588999999
Q ss_pred ccCCCCEEecCCCCccCCCCEEEeCCCCCC----CCcHHHHHHHHHHHHHHHH
Q psy12805 1353 LDPRSNYSTVEKTYLTTVPRVYAAGDCRRG----QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1353 ld~~G~I~VD~~~~~TSvPgVFAAGD~a~g----~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
++ +| |.||+ +++|+.|+|||+|||+.. +.+++.|+.||+.||.+|.
T Consensus 246 ~~-~g-i~Vd~-~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~ 295 (367)
T 1xhc_A 246 TG-RG-ILIDD-NFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILK 295 (367)
T ss_dssp BS-SS-EECCT-TSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHT
T ss_pred CC-CC-EEECC-CcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhc
Confidence 87 56 99997 899999999999999742 4689999999999999996
No 69
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.62 E-value=1.8e-15 Score=178.97 Aligned_cols=185 Identities=14% Similarity=0.122 Sum_probs=138.8
Q ss_pred ceEEEccCCCCCcCCc-----cCc---cchHHHHhh---ccC-CCceEEEccccccccHHHHHHhCCCCccccccc--cc
Q psy12805 1210 GFIKYSRETAPYRPAE-----KRL---KDWDEIYAT---QHV-RKGLRIQAARCMECGVPFCQSSHGCPLGNIIPK--WN 1275 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~-----~rv---~D~~el~~l---~~~-pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~--~d 1275 (1429)
.++.+|||+.|..|+. ..+ .+.++...+ ... +++++|+|+|++++|++..+...|++|..+-+. +.
T Consensus 109 d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 109 GKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL 188 (415)
T ss_dssp EEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred eEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh
Confidence 3477999999887631 122 244444433 334 899999999999999999999999998432221 11
Q ss_pred hhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccCccc
Q psy12805 1276 DLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELDLTL 1353 (1429)
Q Consensus 1276 ~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLel 1353 (1429)
...+..++.+.+.+.++++| +.++..+.+++. +++++..+.+.++ ++++||.||+|+|++ |+..+++.+|+++
T Consensus 189 ~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~~v~~v~l~dG-~~i~aD~Vv~a~G~~-p~~~l~~~~gl~~ 263 (415)
T 3lxd_A 189 ARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEG---DGTKVTGVRMQDG-SVIPADIVIVGIGIV-PCVGALISAGASG 263 (415)
T ss_dssp TTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEE---SSSBEEEEEESSS-CEEECSEEEECSCCE-ESCHHHHHTTCCC
T ss_pred hhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEe---cCCcEEEEEeCCC-CEEEcCEEEECCCCc-cChHHHHhCCCCc
Confidence 12334589999999999998 455778888854 2455444444443 479999999999999 5667899999998
Q ss_pred cCCCCEEecCCCCccCCCCEEEeCCCCCCCC-----------cHHHHHHHHHHHHHHHHH
Q psy12805 1354 DPRSNYSTVEKTYLTTVPRVYAAGDCRRGQS-----------LVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1354 d~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~-----------lvv~Ai~qGr~AA~nI~~ 1402 (1429)
+ +| |.||+ +++|+.|+|||+|||+..+. ++..|..||+.||++|..
T Consensus 264 ~-~g-i~vd~-~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 320 (415)
T 3lxd_A 264 G-NG-VDVDE-FCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICG 320 (415)
T ss_dssp S-SS-EECCT-TCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTT
T ss_pred C-CC-EEECC-CCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcC
Confidence 7 56 99997 89999999999999987543 478999999999999863
No 70
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.62 E-value=2.1e-15 Score=171.48 Aligned_cols=195 Identities=14% Similarity=0.054 Sum_probs=134.8
Q ss_pred ceEEEccCCCCCcCCcc------------CccchHHHHhhc--cCCCceEEEccccccccHHHHHHhCCCCccccccccc
Q psy12805 1210 GFIKYSRETAPYRPAEK------------RLKDWDEIYATQ--HVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWN 1275 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~------------rv~D~~el~~l~--~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d 1275 (1429)
.++.+|+|+.|..|+.. .+.+........ ..+++++|+|+|.++|+++..+...|++|..+-+.-.
T Consensus 114 ~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 114 DAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp EEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 45889999888766321 112222233222 4578999999999999999999888888854433211
Q ss_pred hhhccchHHHHH-HHHHHhCC--CCCCcEEEEEEEeecCCC-ceE-EEEe---CCCeeEEEecEEEEeccccCchhhhhh
Q psy12805 1276 DLIYHNNWSEAL-NQLLQTNN--FPAGIKTVKVEWTKDATG-RWK-MDEV---PNSEKIFKCDLVLLAMGFLGPERYIAN 1347 (1429)
Q Consensus 1276 ~lvf~~e~~~al-~~~Le~~G--~~~gv~v~~Ve~~k~~~G-~~~-~v~~---~gse~~ieaDlVLlAiG~~pp~~~Lle 1347 (1429)
. ...+.+ ++++++.| +..+.++.+++.. .++ .+. .... +++.++++||.||+++|++| +..+++
T Consensus 194 ~-----~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~--~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p-~~~~~~ 265 (333)
T 1vdc_A 194 F-----RASKIMQQRALSNPKIDVIWNSSVVEAYGD--GERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEP-ATKFLD 265 (333)
T ss_dssp C-----CSCHHHHHHHHTCTTEEEECSEEEEEEEES--SSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE-SCGGGT
T ss_pred C-----CccHHHHHHHHhCCCeeEecCCceEEEeCC--CCccceeeEEEEecCCCceEEEecCEEEEEeCCcc-chHHhh
Confidence 0 011222 34556667 4567788888642 111 322 2221 35557899999999999994 556665
Q ss_pred ccCccccCCCCEEecCCCCccCCCCEEEeCCCCCC-CCcHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Q psy12805 1348 ELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRG-QSLVVWAISEGRQAAREIDSFLMGTSTLPDV 1413 (1429)
Q Consensus 1348 ~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g-~~lvv~Ai~qGr~AA~nI~~~L~g~~~~p~~ 1413 (1429)
.+++++++|+|.||+..++|+.|+|||+|||+.. +.++..|+.+|+.||.+|.++|.+++.+|+.
T Consensus 266 -~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~ 331 (333)
T 1vdc_A 266 -GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQEIGSQEGK 331 (333)
T ss_dssp -TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred -ccccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHHHHHHhccccccC
Confidence 5788888999999985579999999999999886 4789999999999999999999998876653
No 71
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.62 E-value=1.2e-15 Score=180.70 Aligned_cols=177 Identities=16% Similarity=0.190 Sum_probs=136.7
Q ss_pred cceEEEccCCCCCcCCc-----cCc---cchHHHHhhc---cCCCceEEEccccccccHHHHHHhCCCCcc------ccc
Q psy12805 1209 RGFIKYSRETAPYRPAE-----KRL---KDWDEIYATQ---HVRKGLRIQAARCMECGVPFCQSSHGCPLG------NII 1271 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~~-----~rv---~D~~el~~l~---~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~------~iL 1271 (1429)
..++.+|||+.|..|+. ..+ .++++...+. ..+++++|+|+|.++||++..++..|++|. .++
T Consensus 102 ~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 181 (408)
T 2gqw_A 102 YGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLM 181 (408)
T ss_dssp CSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 34588999998877643 222 4666665543 347999999999999999999999999983 344
Q ss_pred cccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhcc
Q psy12805 1272 PKWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANEL 1349 (1429)
Q Consensus 1272 p~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~l 1349 (1429)
+. .+..++.+.+.+.++++| +.++.++.+++ ++. +...++ ++++||.||+|+|++ |+..+++++
T Consensus 182 ~~----~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-----~~~---v~~~~g-~~i~~D~vi~a~G~~-p~~~l~~~~ 247 (408)
T 2gqw_A 182 SR----AAPATLADFVARYHAAQGVDLRFERSVTGSV-----DGV---VLLDDG-TRIAADMVVVGIGVL-ANDALARAA 247 (408)
T ss_dssp TT----TSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-----TTE---EEETTS-CEEECSEEEECSCEE-ECCHHHHHH
T ss_pred cc----ccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-----CCE---EEECCC-CEEEcCEEEECcCCC-ccHHHHHhC
Confidence 43 123488899999999988 45577777774 222 223333 479999999999999 555688999
Q ss_pred CccccCCCCEEecCCCCccCCCCEEEeCCCCCCC----------CcHHHHHHHHHHHHHHHHH
Q psy12805 1350 DLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQ----------SLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1350 GLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~----------~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
|++++ +| |.||+ +++|+.|+|||+|||+..+ .++..|+.||+.||.+|..
T Consensus 248 gl~~~-~g-i~Vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 307 (408)
T 2gqw_A 248 GLACD-DG-IFVDA-YGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVD 307 (408)
T ss_dssp TCCBS-SS-EECCT-TCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCC-CC-EEECC-CCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcC
Confidence 99987 56 99997 8999999999999998743 3788999999999999974
No 72
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.61 E-value=3.6e-15 Score=168.34 Aligned_cols=191 Identities=12% Similarity=0.052 Sum_probs=139.4
Q ss_pred ceEEEccCCCCCcCCcc--------CccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCccccccccchhhccc
Q psy12805 1210 GFIKYSRETAPYRPAEK--------RLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHN 1281 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~--------rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~ 1281 (1429)
.++.+|+|+.|..|+.. .+.++.........+++++|+|+|.+++|++..++..|++|..+-+.- .+....
T Consensus 106 ~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~~ 184 (320)
T 1trb_A 106 DALIIATGASARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD-GFRAEK 184 (320)
T ss_dssp EEEEECCCEEECCCCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS-SCCCCH
T ss_pred CEEEECCCCCcCCCCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-ccccCH
Confidence 45789999988776321 222223333333467899999999999999999998898885443321 111233
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceE-EEEeC----CCeeEEEecEEEEeccccCchhhhhhccCcccc
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWK-MDEVP----NSEKIFKCDLVLLAMGFLGPERYIANELDLTLD 1354 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~-~v~~~----gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld 1354 (1429)
.+.+.+.+.+++.| +..+.++.+++.. ++.+. ....+ ++.++++||.||+|+|++| +..+++ .+++++
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~---~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p-~~~~~~-~~l~~~ 259 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD---QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP-NTAIFE-GQLELE 259 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC---SSSEEEEEEECCTTCCCCEEEECSEEEECSCEEE-SCGGGT-TTSCEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC---CCceEEEEEEeccCCCceEEEEcCEEEEEeCCCC-ChHHhc-cccccc
Confidence 56777778888888 5668888888652 23332 22222 4456899999999999994 556666 578888
Q ss_pred CCCCEEecCCCC-----ccCCCCEEEeCCCCCC-CCcHHHHHHHHHHHHHHHHHHHhCCC
Q psy12805 1355 PRSNYSTVEKTY-----LTTVPRVYAAGDCRRG-QSLVVWAISEGRQAAREIDSFLMGTS 1408 (1429)
Q Consensus 1355 ~~G~I~VD~~~~-----~TSvPgVFAAGD~a~g-~~lvv~Ai~qGr~AA~nI~~~L~g~~ 1408 (1429)
+|+|.||+ ++ +|+.|+|||+|||+.. +.++..|+.+|+.||.+|.++|.++.
T Consensus 260 -~G~i~vd~-~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 317 (320)
T 1trb_A 260 -NGYIKVQS-GIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLA 317 (320)
T ss_dssp -TTEECCCC-SSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred -CceEEECC-CcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHHHHHHhcc
Confidence 89999997 54 8999999999999986 57899999999999999999998753
No 73
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.61 E-value=2.8e-15 Score=156.70 Aligned_cols=157 Identities=18% Similarity=0.120 Sum_probs=121.7
Q ss_pred ceEEEccccccccHHHHHHhCCCCcc------cccc---------ccchhhccchHHHHHHHHHHhCC--CCCCcEEEEE
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPLG------NIIP---------KWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKV 1305 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V~------~iLp---------~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~V 1305 (1429)
+++|+|||.+|++++..+++.|++|. .+++ .+.+.+...++.+.+.+.+++.| +..+ +++.+
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 58999999999999999999999882 2231 12111223578888888888887 3445 66667
Q ss_pred EEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccCccccCCCCEEecCCCCccCCCCEEEeCCCCCCCC-
Q psy12805 1306 EWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQS- 1384 (1429)
Q Consensus 1306 e~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~- 1384 (1429)
+.. ++.+.. ..+++ ++++|.||+|+|..| .+++.+|++++ +|.|.||+ +++|+.|+|||+|||+..+.
T Consensus 82 ~~~---~~~~~v-~~~~g--~i~ad~vI~A~G~~~---~~~~~~g~~~~-~g~i~vd~-~~~t~~~~i~a~GD~~~~~~~ 150 (180)
T 2ywl_A 82 RDM---GGVFEV-ETEEG--VEKAERLLLCTHKDP---TLPSLLGLTRR-GAYIDTDE-GGRTSYPRVYAAGVARGKVPG 150 (180)
T ss_dssp EEC---SSSEEE-ECSSC--EEEEEEEEECCTTCC---HHHHHHTCCEE-TTEECCCT-TCBCSSTTEEECGGGGTCCSC
T ss_pred EEc---CCEEEE-EECCC--EEEECEEEECCCCCC---CccccCCCCcc-CceEEeCC-CCCcCCCCEEEeecccCcchh
Confidence 542 233333 23333 799999999999984 35778899999 89899997 89999999999999998776
Q ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCCC
Q psy12805 1385 LVVWAISEGRQAAREIDSFLMGTSTLP 1411 (1429)
Q Consensus 1385 lvv~Ai~qGr~AA~nI~~~L~g~~~~p 1411 (1429)
+++.|+.||+.||.+|..++.+++..+
T Consensus 151 ~~~~A~~~g~~aa~~i~~~~~~~~~~~ 177 (180)
T 2ywl_A 151 HAIISAGDGAYVAVHLVSDLRGEPYKD 177 (180)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSCCCC
T ss_pred hHHHHHHhHHHHHHHHHHHhhhccccc
Confidence 999999999999999999999876543
No 74
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.60 E-value=3.3e-15 Score=176.39 Aligned_cols=184 Identities=16% Similarity=0.197 Sum_probs=138.7
Q ss_pred ceEEEccCCCCCcCCc-----cCc---cchHH---HHhhccCCCceEEEccccccccHHHHHHhCCCCcccccc--ccch
Q psy12805 1210 GFIKYSRETAPYRPAE-----KRL---KDWDE---IYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIP--KWND 1276 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~-----~rv---~D~~e---l~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp--~~d~ 1276 (1429)
.++.+|||+.|..|+. ..+ .+.++ +......+++++|+|+|.+++|++..+...|++|..+.+ .+..
T Consensus 100 d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~ 179 (404)
T 3fg2_P 100 GHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA 179 (404)
T ss_dssp SEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh
Confidence 4488999998877631 112 23444 344444679999999999999999999999998843322 1222
Q ss_pred hhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccCcccc
Q psy12805 1277 LIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELDLTLD 1354 (1429)
Q Consensus 1277 lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld 1354 (1429)
..+..++.+.+.+.++++| +..+.++.+++.. ++++..+...++ ++++||.||+|+|++ |+..+++.+|++++
T Consensus 180 ~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~~v~~V~~~dG-~~i~aD~Vv~a~G~~-p~~~l~~~~gl~~~ 254 (404)
T 3fg2_P 180 RVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAE---GDRVTGVVLSDG-NTLPCDLVVVGVGVI-PNVEIAAAAGLPTA 254 (404)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE---TTEEEEEEETTS-CEEECSEEEECCCEE-ECCHHHHHTTCCBS
T ss_pred hccCHHHHHHHHHHHHhCCcEEEECCEEEEEEec---CCcEEEEEeCCC-CEEEcCEEEECcCCc-cCHHHHHhCCCCCC
Confidence 2344588999999999998 5567888888653 344443444443 479999999999999 56678999999998
Q ss_pred CCCCEEecCCCCccCCCCEEEeCCCCCCCC----------cHHHHHHHHHHHHHHHH
Q psy12805 1355 PRSNYSTVEKTYLTTVPRVYAAGDCRRGQS----------LVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1355 ~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~----------lvv~Ai~qGr~AA~nI~ 1401 (1429)
+| |.||+ +++|+.|+|||+|||+..+. ++..|..||+.||.+|.
T Consensus 255 -~G-i~vd~-~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 308 (404)
T 3fg2_P 255 -AG-IIVDQ-QLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLT 308 (404)
T ss_dssp -SS-EEECT-TSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTT
T ss_pred -CC-EEECC-CcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhC
Confidence 56 99997 89999999999999986432 48999999999999986
No 75
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.60 E-value=2.3e-15 Score=180.08 Aligned_cols=178 Identities=20% Similarity=0.261 Sum_probs=136.0
Q ss_pred ceEEEccCCCCCcCCcc-----C---ccchHHHHhhcc-----CCCceEEEccccccccHHHHHHhCCCCc------ccc
Q psy12805 1210 GFIKYSRETAPYRPAEK-----R---LKDWDEIYATQH-----VRKGLRIQAARCMECGVPFCQSSHGCPL------GNI 1270 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~-----r---v~D~~el~~l~~-----~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~i 1270 (1429)
.++.+|||+.|..|+.. . ..+.++...+.. .+++++|+|+|+++||++..++..|++| .++
T Consensus 104 d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 104 DYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp SEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 45889999998876321 1 234444444322 4579999999999999999999999988 445
Q ss_pred ccc-cchhhccchHHHHHHHHHHhCCCC--CCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhh
Q psy12805 1271 IPK-WNDLIYHNNWSEALNQLLQTNNFP--AGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIAN 1347 (1429)
Q Consensus 1271 Lp~-~d~lvf~~e~~~al~~~Le~~G~~--~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle 1347 (1429)
++. +++ ++.+.+.+.++++ +. .+..+.+++. ++.+..+..++ .+++||.||+|+|++ |+..+++
T Consensus 184 l~~~~~~-----~~~~~l~~~l~~~-v~i~~~~~v~~i~~----~~~v~~v~~~g--~~i~~D~Vv~a~G~~-p~~~l~~ 250 (449)
T 3kd9_A 184 LRRSFDK-----EVTDILEEKLKKH-VNLRLQEITMKIEG----EERVEKVVTDA--GEYKAELVILATGIK-PNIELAK 250 (449)
T ss_dssp TTTTSCH-----HHHHHHHHHHTTT-SEEEESCCEEEEEC----SSSCCEEEETT--EEEECSEEEECSCEE-ECCHHHH
T ss_pred chhhcCH-----HHHHHHHHHHHhC-cEEEeCCeEEEEec----cCcEEEEEeCC--CEEECCEEEEeeCCc-cCHHHHH
Confidence 554 444 8888898888776 43 3566666643 22322233333 479999999999999 5556889
Q ss_pred ccCccccCCCCEEecCCCCccCCCCEEEeCCCCC------C----CCcHHHHHHHHHHHHHHHH
Q psy12805 1348 ELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRR------G----QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1348 ~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~------g----~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
.+|++++++|+|.||+ +++|+.|+|||+|||+. + +++++.|..||+.||.+|.
T Consensus 251 ~~gl~~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~ 313 (449)
T 3kd9_A 251 QLGVRIGETGAIWTNE-KMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIA 313 (449)
T ss_dssp HTTCCBCTTSSBCCCT-TCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred hCCccCCCCCCEEECC-CCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhc
Confidence 9999999999999997 89999999999999974 2 4789999999999999985
No 76
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.60 E-value=3.9e-16 Score=184.11 Aligned_cols=167 Identities=13% Similarity=0.157 Sum_probs=128.6
Q ss_pred ceEEEccCCCCCcCCcc------CccchHHHHhhc---cCCCceEEEccccccccHHHHHHhCCCCcc------cccccc
Q psy12805 1210 GFIKYSRETAPYRPAEK------RLKDWDEIYATQ---HVRKGLRIQAARCMECGVPFCQSSHGCPLG------NIIPKW 1274 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~------rv~D~~el~~l~---~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~------~iLp~~ 1274 (1429)
.++.+|||+.|+.|+.. .+.++++..++. ..+++++|+|+|+++||++..++..|++|. .+++.
T Consensus 106 d~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~- 184 (385)
T 3klj_A 106 EKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER- 184 (385)
T ss_dssp SEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT-
T ss_pred CEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-
Confidence 44889999999877422 234566655443 237899999999999999999999999983 33443
Q ss_pred chhhccchHHHHHHHHHHhCCCC--CCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccCcc
Q psy12805 1275 NDLIYHNNWSEALNQLLQTNNFP--AGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELDLT 1352 (1429)
Q Consensus 1275 d~lvf~~e~~~al~~~Le~~G~~--~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLe 1352 (1429)
.+..++.+.+.+.++++|+. .+..+.++ .++++||+||+++|++ |+..+++.+|++
T Consensus 185 ---~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i------------------g~~~~~D~vv~a~G~~-p~~~~~~~~gl~ 242 (385)
T 3klj_A 185 ---QLDRDGGLFLKDKLDRLGIKIYTNSNFEEM------------------GDLIRSSCVITAVGVK-PNLDFIKDTEIA 242 (385)
T ss_dssp ---TSCHHHHHHHHHHHHTTTCEEECSCCGGGC------------------HHHHHHSEEEECCCEE-ECCGGGTTSCCC
T ss_pred ---hcCHHHHHHHHHHHHhCCCEEEeCCEEEEc------------------CeEEecCeEEECcCcc-cChhhhhhcCCC
Confidence 23348889999999887742 12111111 2368899999999999 566789999999
Q ss_pred ccCCCCEEecCCCCccCCCCEEEeCCCCC----CCCcHHHHHHHHHHHHHHHHH
Q psy12805 1353 LDPRSNYSTVEKTYLTTVPRVYAAGDCRR----GQSLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1353 ld~~G~I~VD~~~~~TSvPgVFAAGD~a~----g~~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
++ +| |.||+ +++|+.|+|||+|||+. .+.++..|..||+.||.+|..
T Consensus 243 ~~-~g-i~vd~-~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 243 SK-RG-ILVND-HMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG 293 (385)
T ss_dssp BS-SS-EEECT-TCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTT
T ss_pred cC-CC-EEECC-CcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcC
Confidence 87 46 99997 89999999999999986 467899999999999999963
No 77
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.60 E-value=2.8e-15 Score=182.87 Aligned_cols=152 Identities=10% Similarity=0.033 Sum_probs=118.8
Q ss_pred CceEEEccccccccHHHHHHhCC--------------CCc------cccccccchhhccchHHHHHHHHHHhCC--CCCC
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHG--------------CPL------GNIIPKWNDLIYHNNWSEALNQLLQTNN--FPAG 1299 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~G--------------c~V------~~iLp~~d~lvf~~e~~~al~~~Le~~G--~~~g 1299 (1429)
.+++|+|+|++|||++..+..++ ++| ++++|.+++ ++++.+.+.|++.| +.++
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~-----~~~~~~~~~L~~~GV~v~~~ 292 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEK-----KLSSYAQSHLENTSIKVHLR 292 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCH-----HHHHHHHHHHHHTTCEEETT
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCH-----HHHHHHHHHHHhcceeeecC
Confidence 36999999999999998876533 233 567777776 89999999999999 5678
Q ss_pred cEEEEEEEeecCCCceEEEEe-CCC--eeEEEecEEEEeccccCch--hhhhhccCccccCCCCEEecCCCCcc-CCCCE
Q psy12805 1300 IKTVKVEWTKDATGRWKMDEV-PNS--EKIFKCDLVLLAMGFLGPE--RYIANELDLTLDPRSNYSTVEKTYLT-TVPRV 1373 (1429)
Q Consensus 1300 v~v~~Ve~~k~~~G~~~~v~~-~gs--e~~ieaDlVLlAiG~~pp~--~~Lle~lGLeld~~G~I~VD~~~~~T-SvPgV 1373 (1429)
.++++++. ++....... +++ ++++++|+||||+|++|+. ..+...++++.+.+|+|.||+ ++|| +.|+|
T Consensus 293 ~~v~~v~~----~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~-~lq~~~~~~I 367 (502)
T 4g6h_A 293 TAVAKVEE----KQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVND-FLQVKGSNNI 367 (502)
T ss_dssp EEEEEECS----SEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCT-TSBBTTCSSE
T ss_pred ceEEEEeC----CceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECC-ccccCCCCCE
Confidence 88888732 222111112 222 3579999999999999653 456677788888899999997 7888 89999
Q ss_pred EEeCCCCC--CCCcHHHHHHHHHHHHHHHHHH
Q psy12805 1374 YAAGDCRR--GQSLVVWAISEGRQAAREIDSF 1403 (1429)
Q Consensus 1374 FAAGD~a~--g~~lvv~Ai~qGr~AA~nI~~~ 1403 (1429)
||+|||+. .+++.+.|.+||+.+|+||.+.
T Consensus 368 fAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 368 FAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp EECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 99999975 4689999999999999999764
No 78
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.60 E-value=3.2e-15 Score=175.10 Aligned_cols=179 Identities=19% Similarity=0.275 Sum_probs=134.4
Q ss_pred ceEEEccCCCCCcCCc-----cCccchHHHH------hhccCCCceEEEccccccccHHHHHHhCCCCcc------cccc
Q psy12805 1210 GFIKYSRETAPYRPAE-----KRLKDWDEIY------ATQHVRKGLRIQAARCMECGVPFCQSSHGCPLG------NIIP 1272 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~-----~rv~D~~el~------~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~------~iLp 1272 (1429)
.++.+|||+.|..|+. ..+.+++++. .....+++++|+|+|.++||++..++..|++|. .+++
T Consensus 103 d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 182 (384)
T 2v3a_A 103 RDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP 182 (384)
T ss_dssp SEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh
Confidence 4588999999987631 2333333222 223348999999999999999999999999983 3344
Q ss_pred ccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccC
Q psy12805 1273 KWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELD 1350 (1429)
Q Consensus 1273 ~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lG 1350 (1429)
.+ +..++.+.+.+.+++.| +.++.++.+++.. ++.+.. ...++ ++++||.||+|+|++| +..+++.+|
T Consensus 183 ~~----~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~---~~~~~v-~~~~g-~~i~~d~vv~a~G~~p-~~~l~~~~g 252 (384)
T 2v3a_A 183 GL----LHPAAAKAVQAGLEGLGVRFHLGPVLASLKKA---GEGLEA-HLSDG-EVIPCDLVVSAVGLRP-RTELAFAAG 252 (384)
T ss_dssp TT----SCHHHHHHHHHHHHTTTCEEEESCCEEEEEEE---TTEEEE-EETTS-CEEEESEEEECSCEEE-CCHHHHHTT
T ss_pred cc----cCHHHHHHHHHHHHHcCCEEEeCCEEEEEEec---CCEEEE-EECCC-CEEECCEEEECcCCCc-CHHHHHHCC
Confidence 33 22478899999999888 4567778888652 223332 33333 4799999999999994 555889999
Q ss_pred ccccCCCCEEecCCCCccCCCCEEEeCCCCC--C--CCcHHHHHHHHHHHHHHHH
Q psy12805 1351 LTLDPRSNYSTVEKTYLTTVPRVYAAGDCRR--G--QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1351 Leld~~G~I~VD~~~~~TSvPgVFAAGD~a~--g--~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
++++ +| |.||+ +++|+.|+|||+|||+. + ..++..|..||+.||.+|.
T Consensus 253 ~~~~-~g-i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~ 304 (384)
T 2v3a_A 253 LAVN-RG-IVVDR-SLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLA 304 (384)
T ss_dssp CCBS-SS-EEECT-TCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHT
T ss_pred CCCC-CC-EEECC-CCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhc
Confidence 9998 57 99997 79999999999999984 3 2467889999999999986
No 79
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.60 E-value=7.5e-15 Score=167.03 Aligned_cols=171 Identities=16% Similarity=0.135 Sum_probs=130.3
Q ss_pred CCCceEEEccccccccHHHHHHhCCCCccccccccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceE-
Q psy12805 1240 VRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWK- 1316 (1429)
Q Consensus 1240 ~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~- 1316 (1429)
.+++++|+|+|.+++|++..+...|.+|..+-+.- .+....+..+.+.+.+++.| +..+..+.+++. ++...
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~-~~~~~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~----~~~~~~ 225 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP-QFRAHEASVKELMKAHEEGRLEVLTPYELRRVEG----DERVRW 225 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCCSCHHHHHHHHHHHHTTSSEEETTEEEEEEEE----SSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC-ccCccHHHHHHHHhccccCCeEEecCCcceeEcc----CCCeeE
Confidence 47899999999999999999988888884332211 11112356677888888877 556778888865 23322
Q ss_pred EEEe---CCCeeEEEecEEEEeccccCchhhhhhccCccccCCCCEEecCCCCccCCCCEEEeCCCCC---CCCcHHHHH
Q psy12805 1317 MDEV---PNSEKIFKCDLVLLAMGFLGPERYIANELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRR---GQSLVVWAI 1390 (1429)
Q Consensus 1317 ~v~~---~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~---g~~lvv~Ai 1390 (1429)
.... +|+.+++++|.|++++|++ |+..+++.++++++ +|+|.||+ +++|+.|+|||+|||+. .+.++..|+
T Consensus 226 v~~~~~~~g~~~~i~~D~vi~a~G~~-p~~~~l~~~~~~~~-~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~ 302 (335)
T 2zbw_A 226 AVVFHNQTQEELALEVDAVLILAGYI-TKLGPLANWGLALE-KNKIKVDT-TMATSIPGVYACGDIVTYPGKLPLIVLGF 302 (335)
T ss_dssp EEEEETTTCCEEEEECSEEEECCCEE-EECGGGGGSCCCEE-TTEEECCT-TCBCSSTTEEECSTTEECTTCCCCHHHHH
T ss_pred EEEEECCCCceEEEecCEEEEeecCC-CCchHhhhcceecc-CCeeeeCC-CCCCCCCCEEEeccccccCcchhhhhhhH
Confidence 2222 4555789999999999999 55568888999988 68899997 89999999999999985 357999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCccc
Q psy12805 1391 SEGRQAAREIDSFLMGTSTLPDVGGVIT 1418 (1429)
Q Consensus 1391 ~qGr~AA~nI~~~L~g~~~~p~~g~v~~ 1418 (1429)
.||+.||.+|..+|.+....+.......
T Consensus 303 ~~g~~aa~~i~~~l~~~~~~~~~~~~~~ 330 (335)
T 2zbw_A 303 GEAAIAANHAAAYANPALKVNPGHSSEK 330 (335)
T ss_dssp HHHHHHHHHHHHHHCTTSCSSCCCGGGS
T ss_pred HHHHHHHHHHHHHhhhhhccCCcccccc
Confidence 9999999999999998776555444333
No 80
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.60 E-value=5.2e-15 Score=167.48 Aligned_cols=188 Identities=15% Similarity=0.138 Sum_probs=134.7
Q ss_pred ceEEEccCCCCCcCCcc--------CccchHHHHhh--ccCCCceEEEccccccccHHHHHHhCCCCccccccccchhhc
Q psy12805 1210 GFIKYSRETAPYRPAEK--------RLKDWDEIYAT--QHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIY 1279 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~--------rv~D~~el~~l--~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf 1279 (1429)
.++.+|+|+.|..|... .+.++...... ...+++++|+|+|.++++++..+...|++|..+.+.-.. .
T Consensus 132 d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~--~ 209 (338)
T 3itj_A 132 DAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL--R 209 (338)
T ss_dssp EEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC--C
T ss_pred CEEEECcCCCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc--C
Confidence 34779999988776322 22233322222 345789999999999999999999889888544332211 0
Q ss_pred cchHHHHHHHHHHh-CC--CCCCcEEEEEEEeecCCCceEEEEe----CCCeeEEEecEEEEeccccCchhhhhhccCcc
Q psy12805 1280 HNNWSEALNQLLQT-NN--FPAGIKTVKVEWTKDATGRWKMDEV----PNSEKIFKCDLVLLAMGFLGPERYIANELDLT 1352 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~-~G--~~~gv~v~~Ve~~k~~~G~~~~v~~----~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLe 1352 (1429)
. .+.+.+.+.+ .| +..+..+.+++.. ++.+..+.+ +++.++++||.||+++|++ |+..+++. +++
T Consensus 210 --~-~~~~~~~l~~~~gv~i~~~~~v~~i~~~---~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~-p~~~~~~~-~l~ 281 (338)
T 3itj_A 210 --A-STIMQKRAEKNEKIEILYNTVALEAKGD---GKLLNALRIKNTKKNEETDLPVSGLFYAIGHT-PATKIVAG-QVD 281 (338)
T ss_dssp --S-CHHHHHHHHHCTTEEEECSEEEEEEEES---SSSEEEEEEEETTTTEEEEEECSEEEECSCEE-ECCGGGBT-TBC
T ss_pred --C-CHHHHHHHHhcCCeEEeecceeEEEEcc---cCcEEEEEEEECCCCceEEEEeCEEEEEeCCC-CChhHhhC-ceE
Confidence 0 2233344444 46 5667888888652 232221221 2445689999999999999 55567666 999
Q ss_pred ccCCCCEEecCCCCccCCCCEEEeCCCCCC-CCcHHHHHHHHHHHHHHHHHHHhCC
Q psy12805 1353 LDPRSNYSTVEKTYLTTVPRVYAAGDCRRG-QSLVVWAISEGRQAAREIDSFLMGT 1407 (1429)
Q Consensus 1353 ld~~G~I~VD~~~~~TSvPgVFAAGD~a~g-~~lvv~Ai~qGr~AA~nI~~~L~g~ 1407 (1429)
++++|++.|++.+++|+.|+|||+|||+.. +..+..|+.+|+.||.+|.++|.++
T Consensus 282 ~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 337 (338)
T 3itj_A 282 TDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTSL 337 (338)
T ss_dssp BCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHHHHHhcC
Confidence 999999997555899999999999999974 6899999999999999999999875
No 81
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.59 E-value=3.8e-15 Score=177.78 Aligned_cols=186 Identities=15% Similarity=0.160 Sum_probs=138.1
Q ss_pred ceEEEccCCCCCcCCcc-----C------ccchHHHHhh---ccCCCceEEEccccccccHHHHHHhCCCCccccccc--
Q psy12805 1210 GFIKYSRETAPYRPAEK-----R------LKDWDEIYAT---QHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPK-- 1273 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~-----r------v~D~~el~~l---~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~-- 1273 (1429)
.++.+|||+.|..|+.. . +.++++...+ ...+++++|+|+|.++||++..+...|++|..+-+.
T Consensus 104 d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 183 (431)
T 1q1r_A 104 DRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 183 (431)
T ss_dssp SEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 45889999998876321 1 2456665444 235899999999999999999999999988322211
Q ss_pred cchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccCc
Q psy12805 1274 WNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELDL 1351 (1429)
Q Consensus 1274 ~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGL 1351 (1429)
.....+..++.+.+.+.+++.| +..+.++.+++.. .+++.+..+...++ ++++||.||+|+|++ |+..+++.+|+
T Consensus 184 ~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~v~~v~~~~G-~~i~~D~Vv~a~G~~-p~~~l~~~~gl 260 (431)
T 1q1r_A 184 VLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMS-TDQQKVTAVLCEDG-TRLPADLVIAGIGLI-PNCELASAAGL 260 (431)
T ss_dssp TTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEC-TTTCCEEEEEETTS-CEEECSEEEECCCEE-ECCHHHHHTTC
T ss_pred cccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEec-cCCCcEEEEEeCCC-CEEEcCEEEECCCCC-cCcchhhccCC
Confidence 1111233488889999998888 5567788877531 02344433444433 479999999999999 55568899999
Q ss_pred cccCCCCEEecCCCCccCCCCEEEeCCCCCCC----------CcHHHHHHHHHHHHHHHH
Q psy12805 1352 TLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQ----------SLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1352 eld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~----------~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+++ +| |.||+ +++||.|+|||+|||+..+ .++..|+.||+.||.+|.
T Consensus 261 ~~~-~g-i~Vd~-~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 317 (431)
T 1q1r_A 261 QVD-NG-IVINE-HMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILC 317 (431)
T ss_dssp CBS-SS-EECCT-TSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHT
T ss_pred CCC-CC-EEECC-CcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhc
Confidence 987 56 99997 8999999999999998753 267899999999999996
No 82
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.59 E-value=3e-15 Score=178.96 Aligned_cols=180 Identities=18% Similarity=0.218 Sum_probs=137.1
Q ss_pred cceEEEccCCCCCcCCc-----cCcc---chHHHHhh---cc--CCCceEEEccccccccHHHHHHhCCCCc------cc
Q psy12805 1209 RGFIKYSRETAPYRPAE-----KRLK---DWDEIYAT---QH--VRKGLRIQAARCMECGVPFCQSSHGCPL------GN 1269 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~~-----~rv~---D~~el~~l---~~--~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~~ 1269 (1429)
..++.+|||+.|..|+. .++. ++++..++ .. .+++++|+|+|.++++++..+++.|++| ..
T Consensus 104 ~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 104 YDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp CSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 34688999999987732 2232 44554433 22 6899999999999999999999999988 33
Q ss_pred cccccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhh
Q psy12805 1270 IIPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIAN 1347 (1429)
Q Consensus 1270 iLp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle 1347 (1429)
+++. .+..++.+.+.+.+++.| +.++.++.+++. ++.+..+..++ .++++|.||+|+|++ |+..+++
T Consensus 184 ~l~~----~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~----~~~v~~v~~~~--~~i~~d~vi~a~G~~-p~~~~~~ 252 (447)
T 1nhp_A 184 PLGV----YLDKEFTDVLTEEMEANNITIATGETVERYEG----DGRVQKVVTDK--NAYDADLVVVAVGVR-PNTAWLK 252 (447)
T ss_dssp TTTT----TCCHHHHHHHHHHHHTTTEEEEESCCEEEEEC----SSBCCEEEESS--CEEECSEEEECSCEE-ESCGGGT
T ss_pred cccc----cCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEc----cCcEEEEEECC--CEEECCEEEECcCCC-CChHHHH
Confidence 4442 123488899999999888 555777777753 23322223343 369999999999999 4556777
Q ss_pred ccCccccCCCCEEecCCCCccCCCCEEEeCCCCCC----------CCcHHHHHHHHHHHHHHHH
Q psy12805 1348 ELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRG----------QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1348 ~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g----------~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
.+ ++++++|+|.||+ +++|+.|+|||+|||+.. +.+++.|..||+.||.+|.
T Consensus 253 ~~-~~~~~~G~i~Vd~-~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 253 GT-LELHPNGLIKTDE-YMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLE 314 (447)
T ss_dssp TT-SCBCTTSCBCCCT-TCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred hh-hhhcCCCcEEECc-cccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhc
Confidence 77 8888889999997 899999999999999862 3689999999999999985
No 83
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.58 E-value=3.9e-15 Score=184.07 Aligned_cols=179 Identities=17% Similarity=0.221 Sum_probs=138.5
Q ss_pred cceEEEccCCCCCcCCcc------Cccch---HHHHhh-----ccCCCceEEEccccccccHHHHHHhCCCCc------c
Q psy12805 1209 RGFIKYSRETAPYRPAEK------RLKDW---DEIYAT-----QHVRKGLRIQAARCMECGVPFCQSSHGCPL------G 1268 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~~~------rv~D~---~el~~l-----~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V------~ 1268 (1429)
..++.+|||+.|..|+.. .+.+. .+...+ ...+++++|+|+|++++|++..++..|++| .
T Consensus 141 ~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 220 (588)
T 3ics_A 141 YDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN 220 (588)
T ss_dssp CSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 345889999998876322 22222 222221 246899999999999999999999999988 4
Q ss_pred ccccccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhh
Q psy12805 1269 NIIPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIA 1346 (1429)
Q Consensus 1269 ~iLp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Ll 1346 (1429)
.++|.++. ++.+.+.+.+++.| +..+.++.+++.. ++. +.+.++ ++++||.||+|+|++ |+..++
T Consensus 221 ~~l~~~~~-----~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~~---v~~~~g-~~i~~D~Vi~a~G~~-p~~~~l 287 (588)
T 3ics_A 221 QVMPPIDY-----EMAAYVHEHMKNHDVELVFEDGVDALEEN---GAV---VRLKSG-SVIQTDMLILAIGVQ-PESSLA 287 (588)
T ss_dssp SSCTTSCH-----HHHHHHHHHHHHTTCEEECSCCEEEEEGG---GTE---EEETTS-CEEECSEEEECSCEE-ECCHHH
T ss_pred cccccCCH-----HHHHHHHHHHHHcCCEEEECCeEEEEecC---CCE---EEECCC-CEEEcCEEEEccCCC-CChHHH
Confidence 45555554 88999999999988 5567788888542 122 223333 479999999999999 555688
Q ss_pred hccCccccCCCCEEecCCCCccCCCCEEEeCCCCC------C----CCcHHHHHHHHHHHHHHHH
Q psy12805 1347 NELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRR------G----QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1347 e~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~------g----~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+.+|++++++|+|.||+ +++|++|+|||+|||+. + +++++.|..||+.||.+|.
T Consensus 288 ~~~g~~~~~~g~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 351 (588)
T 3ics_A 288 KGAGLALGVRGTIKVNE-KFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIH 351 (588)
T ss_dssp HHTTCCBCGGGCBCCCT-TSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred HhcCceEcCCCCEEECC-ccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhc
Confidence 99999999999999997 89999999999999984 2 4689999999999999986
No 84
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.58 E-value=3.2e-15 Score=171.00 Aligned_cols=190 Identities=14% Similarity=0.107 Sum_probs=135.4
Q ss_pred ceEEEccCCCCCcCCcc--------CccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCccccccccchhhccc
Q psy12805 1210 GFIKYSRETAPYRPAEK--------RLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHN 1281 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~--------rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~ 1281 (1429)
.++.+|+|+.|..|+.. .+.++.........+++++|+|+|.++||++..++..|++|..+-+.- .+....
T Consensus 116 d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~-~~~~~~ 194 (335)
T 2a87_A 116 RAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD-EFRASK 194 (335)
T ss_dssp EEEEECCCEEECCCCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS-SCSSCT
T ss_pred CEEEECCCCCccCCCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC-cCCccH
Confidence 34779999988776321 222333333334467999999999999999999998898885433221 111111
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCc--eEEEEe-CCCeeEEEecEEEEeccccCchhhhhhccCccccCC
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGR--WKMDEV-PNSEKIFKCDLVLLAMGFLGPERYIANELDLTLDPR 1356 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~--~~~v~~-~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~~ 1356 (1429)
.+ ..+++++.| +..+.++.+++.. ++. +..... +++.++++||.||+++|++| +..+++ .+++++++
T Consensus 195 ~~---~~~~~~~~gV~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p-~~~~~~-~~l~~~~~ 266 (335)
T 2a87_A 195 IM---LDRARNNDKIRFLTNHTVVAVDGD---TTVTGLRVRDTNTGAETTLPVTGVFVAIGHEP-RSGLVR-EAIDVDPD 266 (335)
T ss_dssp TH---HHHHHHCTTEEEECSEEEEEEECS---SSCCEEEEEEETTSCCEEECCSCEEECSCEEE-CCTTTB-TTBCBCTT
T ss_pred HH---HHHHhccCCcEEEeCceeEEEecC---CcEeEEEEEEcCCCceEEeecCEEEEccCCcc-ChhHhh-cccccCCC
Confidence 22 224456666 5567778777542 221 222211 45556899999999999994 556665 57888989
Q ss_pred CCEEecCCCCccCCCCEEEeCCCCCC-CCcHHHHHHHHHHHHHHHHHHHhCCC
Q psy12805 1357 SNYSTVEKTYLTTVPRVYAAGDCRRG-QSLVVWAISEGRQAAREIDSFLMGTS 1408 (1429)
Q Consensus 1357 G~I~VD~~~~~TSvPgVFAAGD~a~g-~~lvv~Ai~qGr~AA~nI~~~L~g~~ 1408 (1429)
|+|.||+..++|+.|+|||+|||+.. +.++..|+.+|+.||.+|.++|.+++
T Consensus 267 G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~l~~~~ 319 (335)
T 2a87_A 267 GYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAEHA 319 (335)
T ss_dssp SCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHHhhcCc
Confidence 99999985679999999999999986 57899999999999999999998754
No 85
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.58 E-value=9.6e-15 Score=191.90 Aligned_cols=184 Identities=16% Similarity=0.148 Sum_probs=136.5
Q ss_pred cceEEEccCC-CCCcCC-------ccCccchHHHHhh----------------ccCCCceEEEccccccccHHHHHHhCC
Q psy12805 1209 RGFIKYSRET-APYRPA-------EKRLKDWDEIYAT----------------QHVRKGLRIQAARCMECGVPFCQSSHG 1264 (1429)
Q Consensus 1209 ~gf~kiAtGs-~P~~p~-------~~rv~D~~el~~l----------------~~~pk~lvVIGaGcIgcE~a~c~s~~G 1264 (1429)
..++.+|||+ .|..++ ...+.+..+++.. ...+++++|+|+|.+++|++..+.++|
T Consensus 276 ~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G 355 (1025)
T 1gte_A 276 YKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCG 355 (1025)
T ss_dssp CCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTT
T ss_pred CCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcC
Confidence 4458899998 476442 2346666666542 123579999999999999999999999
Q ss_pred C-Ccccc-------ccccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEE--------------EEe
Q psy12805 1265 C-PLGNI-------IPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKM--------------DEV 1320 (1429)
Q Consensus 1265 c-~V~~i-------Lp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~--------------v~~ 1320 (1429)
+ +|..+ +|.++. ++ +.+++.| |..+..++++... +|++.. +..
T Consensus 356 ~~~Vtvv~r~~~~~~~~~~~-----e~-----~~~~~~Gv~~~~~~~~~~i~~~---~g~v~~v~~~~~~~~~~g~~~~~ 422 (1025)
T 1gte_A 356 ARRVFLVFRKGFVNIRAVPE-----EV-----ELAKEEKCEFLPFLSPRKVIVK---GGRIVAVQFVRTEQDETGKWNED 422 (1025)
T ss_dssp CSEEEEECSSCGGGCCSCHH-----HH-----HHHHHTTCEEECSEEEEEEEEE---TTEEEEEEEEEEEECTTSCEEEE
T ss_pred CCEEEEEEecChhhCCCCHH-----HH-----HHHHHcCCEEEeCCCceEEEcc---CCeEEEEEEEEeEEcCCCCcccC
Confidence 7 56333 233222 22 3455667 4456666666431 232211 112
Q ss_pred CCCeeEEEecEEEEeccccCchhhhhhc-cCccccCCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHH
Q psy12805 1321 PNSEKIFKCDLVLLAMGFLGPERYIANE-LDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAARE 1399 (1429)
Q Consensus 1321 ~gse~~ieaDlVLlAiG~~pp~~~Lle~-lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~n 1399 (1429)
+|++++++||+||+|+|++||+..|+++ .|++++++|+|.||+.+++||+|+|||+|||+.++.++++|+.||+.||.+
T Consensus 423 ~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~ 502 (1025)
T 1gte_A 423 EDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWY 502 (1025)
T ss_dssp EEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCCHHHHHHHHHHHHHH
T ss_pred CCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCchHHHHHHHHHHHHHHH
Confidence 3445689999999999999777778766 599999999999997679999999999999999999999999999999999
Q ss_pred HHHHHh
Q psy12805 1400 IDSFLM 1405 (1429)
Q Consensus 1400 I~~~L~ 1405 (1429)
|+.+|+
T Consensus 503 i~~~L~ 508 (1025)
T 1gte_A 503 IHKYIQ 508 (1025)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999997
No 86
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.58 E-value=4.8e-15 Score=164.74 Aligned_cols=182 Identities=12% Similarity=0.049 Sum_probs=133.4
Q ss_pred ceEEEccCCCCCcCCcc--------CccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCccccccccchhhccc
Q psy12805 1210 GFIKYSRETAPYRPAEK--------RLKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHN 1281 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~--------rv~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~ 1281 (1429)
.++.+|||+.|..|... .+............+++++|+|+|.++++++..+...| +|..+.+...
T Consensus 102 d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~------ 174 (297)
T 3fbs_A 102 GRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV------ 174 (297)
T ss_dssp EEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC------
T ss_pred CEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC------
Confidence 45889999988776321 12222222223345799999999999999999999887 7654433222
Q ss_pred hHHHHHHHHHHhCCCCC-CcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccCcccc--CCC-
Q psy12805 1282 NWSEALNQLLQTNNFPA-GIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELDLTLD--PRS- 1357 (1429)
Q Consensus 1282 e~~~al~~~Le~~G~~~-gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld--~~G- 1357 (1429)
.+.+.+.+.+++.|+.. ..++.+++. ++ . +...+. +++++|.|++++|++ |+..+++.+|++++ ++|
T Consensus 175 ~~~~~~~~~l~~~gv~i~~~~v~~i~~----~~--~-v~~~~g-~~~~~D~vi~a~G~~-p~~~~~~~~g~~~~~~~~G~ 245 (297)
T 3fbs_A 175 EPDADQHALLAARGVRVETTRIREIAG----HA--D-VVLADG-RSIALAGLFTQPKLR-ITVDWIEKLGCAVEEGPMGS 245 (297)
T ss_dssp CCCHHHHHHHHHTTCEEECSCEEEEET----TE--E-EEETTS-CEEEESEEEECCEEE-CCCSCHHHHTCCEEEETTEE
T ss_pred CCCHHHHHHHHHCCcEEEcceeeeeec----CC--e-EEeCCC-CEEEEEEEEEccCcc-cCchhHHhcCCccccCCCCc
Confidence 34455677788887421 245555532 22 1 233333 479999999999999 45568899999887 457
Q ss_pred CEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhCCC
Q psy12805 1358 NYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFLMGTS 1408 (1429)
Q Consensus 1358 ~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g~~ 1408 (1429)
++.||+ +++|+.|+|||+|||+..+.+++.|+.+|+.||.+|.++|.+.+
T Consensus 246 ~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 295 (297)
T 3fbs_A 246 TIVTDP-MKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSILFPE 295 (297)
T ss_dssp EECCCT-TCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred eEEeCC-CCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 899997 79999999999999999899999999999999999999998865
No 87
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.55 E-value=1.1e-14 Score=176.85 Aligned_cols=184 Identities=13% Similarity=0.154 Sum_probs=135.5
Q ss_pred ceEEEccCCCCCcCCc---------cC---ccchHHHHhh---ccCCCceEEEccccccccHHHHHHh----CCCCcccc
Q psy12805 1210 GFIKYSRETAPYRPAE---------KR---LKDWDEIYAT---QHVRKGLRIQAARCMECGVPFCQSS----HGCPLGNI 1270 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~---------~r---v~D~~el~~l---~~~pk~lvVIGaGcIgcE~a~c~s~----~Gc~V~~i 1270 (1429)
.++.+|||+.|..|+. .. +.+.+++..+ ...+++++|+|+|+++||++..++. .|++|..+
T Consensus 134 d~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v 213 (493)
T 1m6i_A 134 EKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQL 213 (493)
T ss_dssp EEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CEEEECCCCCCCCCCCcccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEE
Confidence 3478999999987631 11 2344444333 3458999999999999999998775 57777544
Q ss_pred ccc--cchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhh
Q psy12805 1271 IPK--WNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIA 1346 (1429)
Q Consensus 1271 Lp~--~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Ll 1346 (1429)
.+. +...++..++.+.+.+.++++| +.++..+.+++.. ++.+. +.+.++ ++++||.||+|+|++ |+..++
T Consensus 214 ~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~---~~~~~-v~l~dG-~~i~aD~Vv~a~G~~-pn~~l~ 287 (493)
T 1m6i_A 214 FPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVS---SGKLL-IKLKDG-RKVETDHIVAAVGLE-PNVELA 287 (493)
T ss_dssp CSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEE---TTEEE-EEETTS-CEEEESEEEECCCEE-ECCTTH
T ss_pred ecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEec---CCeEE-EEECCC-CEEECCEEEECCCCC-ccHHHH
Confidence 332 1223344578889999999998 5568888888642 33333 333333 479999999999999 556688
Q ss_pred hccCccccC-CCCEEecCCCCccCCCCEEEeCCCCCC---------CCcHHHHHHHHHHHHHHHH
Q psy12805 1347 NELDLTLDP-RSNYSTVEKTYLTTVPRVYAAGDCRRG---------QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1347 e~lGLeld~-~G~I~VD~~~~~TSvPgVFAAGD~a~g---------~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+.+|+++++ +|.|.||+ +++| .|+|||+|||+.. ...+..|+.||+.||.+|.
T Consensus 288 ~~~gl~~~~~~ggi~Vd~-~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~ 350 (493)
T 1m6i_A 288 KTGGLEIDSDFGGFRVNA-ELQA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMT 350 (493)
T ss_dssp HHHTCCBCTTTCSEECCT-TCEE-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred HHcCCccccCCCcEEECC-Cccc-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhc
Confidence 999999985 68899997 7898 5999999999863 2356789999999999986
No 88
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.53 E-value=1.8e-14 Score=162.64 Aligned_cols=189 Identities=11% Similarity=0.103 Sum_probs=132.6
Q ss_pred ceEEEccCC---CCCcCCccCccc-------hHHHHhhcc-CCCceEEEccccccccHHHHHHhCCCCccccccccchhh
Q psy12805 1210 GFIKYSRET---APYRPAEKRLKD-------WDEIYATQH-VRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLI 1278 (1429)
Q Consensus 1210 gf~kiAtGs---~P~~p~~~rv~D-------~~el~~l~~-~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lv 1278 (1429)
.++.+|||+ .|..|....... + .+.+... .+++++|+|+|.++|+++..+...|.+|..+.+.-..
T Consensus 113 d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~-- 189 (332)
T 3lzw_A 113 KTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF-- 189 (332)
T ss_dssp EEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSC--
T ss_pred CEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcC--
Confidence 458899999 776653221111 1 1111111 3689999999999999999998888877433221110
Q ss_pred ccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCC-ceEEEE-eCCCeeEEEecEEEEeccccCchhhhhhccCcccc
Q psy12805 1279 YHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATG-RWKMDE-VPNSEKIFKCDLVLLAMGFLGPERYIANELDLTLD 1354 (1429)
Q Consensus 1279 f~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G-~~~~v~-~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld 1354 (1429)
. ..... .+.+++.| +..+..+.+++.. .+. .+.... ..++.++++||.|++++|+. |+..+++.+++++
T Consensus 190 ~--~~~~~-~~~l~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~-p~~~~~~~~~~~~- 262 (332)
T 3lzw_A 190 R--AHEHS-VENLHASKVNVLTPFVPAELIGE--DKIEQLVLEEVKGDRKEILEIDDLIVNYGFV-SSLGPIKNWGLDI- 262 (332)
T ss_dssp S--SCHHH-HHHHHHSSCEEETTEEEEEEECS--SSCCEEEEEETTSCCEEEEECSEEEECCCEE-CCCGGGGGSSCCE-
T ss_pred C--ccHHH-HHHHhcCCeEEEeCceeeEEecC--CceEEEEEEecCCCceEEEECCEEEEeeccC-CCchHHhhcCccc-
Confidence 0 01111 23356677 4567778777542 111 122222 13445789999999999999 5557899999998
Q ss_pred CCCCEEecCCCCccCCCCEEEeCCCC---CCCCcHHHHHHHHHHHHHHHHHHHhCCCC
Q psy12805 1355 PRSNYSTVEKTYLTTVPRVYAAGDCR---RGQSLVVWAISEGRQAAREIDSFLMGTST 1409 (1429)
Q Consensus 1355 ~~G~I~VD~~~~~TSvPgVFAAGD~a---~g~~lvv~Ai~qGr~AA~nI~~~L~g~~~ 1409 (1429)
++|+|.||+ +++|+.|+|||+|||+ ..+.++..|+.||+.||.+|.++|.++..
T Consensus 263 ~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 319 (332)
T 3lzw_A 263 EKNSIVVKS-TMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKAR 319 (332)
T ss_dssp ETTEEECCT-TSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred cCCeEEeCC-CCceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHHhhChhhc
Confidence 579999997 8999999999999998 56789999999999999999999988654
No 89
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.53 E-value=4.8e-14 Score=162.69 Aligned_cols=165 Identities=15% Similarity=0.121 Sum_probs=124.5
Q ss_pred CCCceEEEccccccccHHHHHHhCCCCccccccccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEE
Q psy12805 1240 VRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKM 1317 (1429)
Q Consensus 1240 ~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~ 1317 (1429)
.+++++|+|+|.++++++..+...|.+|..+-+.- .+....++.+.+.+.+++.+ +..+.++.+++.. ++.+..
T Consensus 162 ~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~-~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~---~~~v~~ 237 (360)
T 3ab1_A 162 KGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH-EFQGHGKTAHEVERARANGTIDVYLETEVASIEES---NGVLTR 237 (360)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCSSCSHHHHSSHHHHHHTSEEEESSEEEEEEEEE---TTEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-CCCCCHHHHHHHHHHhhcCceEEEcCcCHHHhccC---CCceEE
Confidence 46899999999999999999988888884332221 11111345666777777777 5667788888653 343322
Q ss_pred EEe---CCCeeEEEecEEEEeccccCchhhhhhccCccccCCCCEEecCCCCccCCCCEEEeCCCCC---CCCcHHHHHH
Q psy12805 1318 DEV---PNSEKIFKCDLVLLAMGFLGPERYIANELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRR---GQSLVVWAIS 1391 (1429)
Q Consensus 1318 v~~---~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~---g~~lvv~Ai~ 1391 (1429)
+.+ +|+.+++++|.||+++|+. |+..+++.++++++ +|+|.||+ +++|+.|+|||+|||+. .+.++..|+.
T Consensus 238 v~~~~~~g~~~~i~~D~vi~a~G~~-p~~~~l~~~~~~~~-~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~ 314 (360)
T 3ab1_A 238 VHLRSSDGSKWTVEADRLLILIGFK-SNLGPLARWDLELY-ENALVVDS-HMKTSVDGLYAAGDIAYYPGKLKIIQTGLS 314 (360)
T ss_dssp EEEEETTCCEEEEECSEEEECCCBC-CSCGGGGGSSCCEE-TTEEECCT-TSBCSSTTEEECSTTEECTTCCCSHHHHHH
T ss_pred EEEEecCCCeEEEeCCEEEECCCCC-CCHHHHHhhccccc-cCeeeecC-CCcCCCCCEEEecCccCCCCccceeehhHH
Confidence 222 4555789999999999999 55568888999988 68999997 89999999999999985 3678999999
Q ss_pred HHHHHHHHHHHHHhCCCCCC
Q psy12805 1392 EGRQAAREIDSFLMGTSTLP 1411 (1429)
Q Consensus 1392 qGr~AA~nI~~~L~g~~~~p 1411 (1429)
||+.||.+|..+|.+....+
T Consensus 315 ~g~~aa~~i~~~l~~~~~~~ 334 (360)
T 3ab1_A 315 EATMAVRHSLSYIKPGEKIR 334 (360)
T ss_dssp HHHHHHHHHHHHHSCC----
T ss_pred HHHHHHHHHHhhcCCccccC
Confidence 99999999999998876543
No 90
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.48 E-value=7.2e-14 Score=170.93 Aligned_cols=187 Identities=13% Similarity=0.088 Sum_probs=132.4
Q ss_pred ceEEEccCCCCCcCCccC--------ccchHHHHhhccCCCceEEEccccccccHHHHHHhCCCCccccccccchhhccc
Q psy12805 1210 GFIKYSRETAPYRPAEKR--------LKDWDEIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHN 1281 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~~r--------v~D~~el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~ 1281 (1429)
.++.+|||+.|..|.... +..+.........+++++|+|+|.++||++..++..|.+|..+-+. +.+ ..
T Consensus 316 d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~-~~l-~~- 392 (521)
T 1hyu_A 316 RSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFA-PEM-KA- 392 (521)
T ss_dssp EEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSS-SSC-CS-
T ss_pred CEEEECCCCCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeC-ccc-Cc-
Confidence 357899998877653211 1112111112235789999999999999999999888888433221 111 11
Q ss_pred hHHHHHHHHHHh-CC--CCCCcEEEEEEEeecCCCceE-EEEe---CCCeeEEEecEEEEeccccCchhhhhhccCcccc
Q psy12805 1282 NWSEALNQLLQT-NN--FPAGIKTVKVEWTKDATGRWK-MDEV---PNSEKIFKCDLVLLAMGFLGPERYIANELDLTLD 1354 (1429)
Q Consensus 1282 e~~~al~~~Le~-~G--~~~gv~v~~Ve~~k~~~G~~~-~v~~---~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld 1354 (1429)
.+.+.+.+++ .| +..+..++++... ++++. .... +|+..++++|.|++++|++ |+..+++. +++++
T Consensus 393 --~~~l~~~l~~~~gV~v~~~~~v~~i~~~---~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~-pn~~~l~~-~l~~~ 465 (521)
T 1hyu_A 393 --DQVLQDKVRSLKNVDIILNAQTTEVKGD---GSKVVGLEYRDRVSGDIHSVALAGIFVQIGLL-PNTHWLEG-ALERN 465 (521)
T ss_dssp --CHHHHHHHTTCTTEEEECSEEEEEEEEC---SSSEEEEEEEETTTCCEEEEECSEEEECCCEE-ESCGGGTT-TSCBC
T ss_pred --CHHHHHHHhcCCCcEEEeCCEEEEEEcC---CCcEEEEEEEeCCCCceEEEEcCEEEECcCCC-CCchHHhh-hhccC
Confidence 1345555655 45 5567788877542 33432 2221 3555689999999999999 45567766 48889
Q ss_pred CCCCEEecCCCCccCCCCEEEeCCCCCCC-CcHHHHHHHHHHHHHHHHHHHhCC
Q psy12805 1355 PRSNYSTVEKTYLTTVPRVYAAGDCRRGQ-SLVVWAISEGRQAAREIDSFLMGT 1407 (1429)
Q Consensus 1355 ~~G~I~VD~~~~~TSvPgVFAAGD~a~g~-~lvv~Ai~qGr~AA~nI~~~L~g~ 1407 (1429)
++|+|.||+ +++|++|+|||+|||+..+ .+++.|+.+|+.||.+|..+|.+.
T Consensus 466 ~~G~I~Vd~-~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~L~~~ 518 (521)
T 1hyu_A 466 RMGEIIIDA-KCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRT 518 (521)
T ss_dssp TTSCBCCCT-TCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEeCC-CCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHHHHHhh
Confidence 999999997 8999999999999999864 689999999999999999999764
No 91
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.48 E-value=1.8e-13 Score=159.97 Aligned_cols=171 Identities=18% Similarity=0.145 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+.+.+.|+.+|+.+|+.||++|.+ .....|..+.++|||+|.++.+.|+.... .....+|+|.+.+|.++.+.+
T Consensus 126 ~~~~e~I~~ir~~~~~~~Vi~G~V---~T~e~A~~a~~aGaD~I~Vg~g~G~~~~t--r~~~g~g~p~l~aI~~~~~~~- 199 (361)
T 3r2g_A 126 KYVGKTLKSLRQLLGSRCIMAGNV---ATYAGADYLASCGADIIKAGIGGGSVCST--RIKTGFGVPMLTCIQDCSRAD- 199 (361)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEE---CSHHHHHHHHHTTCSEEEECCSSSSCHHH--HHHHCCCCCHHHHHHHHTTSS-
T ss_pred HhHHHHHHHHHHhcCCCeEEEcCc---CCHHHHHHHHHcCCCEEEEcCCCCcCccc--cccCCccHHHHHHHHHHHHhC-
Confidence 456778999999888899999844 34456888999999999996554432111 012246789877777665421
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceec-CHHHHhhcCC------
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQ-DPELRKKFAG------ 660 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatq-d~~lr~~~~g------ 660 (1429)
. +||++|||+++.|++||+++|||+|++|+.++- +.+||..+... +....|.|-|
T Consensus 200 ------~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~-----------t~Espg~~~~~~~g~~~k~y~Gm~s~~~ 261 (361)
T 3r2g_A 200 ------R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAG-----------SAPTPGEVFQKDDGSKVKRYRGMASREA 261 (361)
T ss_dssp ------S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTT-----------BTTSSSCEEECTTSCEEEEESCCHHHHH
T ss_pred ------C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhC-----------CccCCceeEEecCCeEEEEEecCCCcch
Confidence 1 999999999999999999999999999996554 34677777666 4332222111
Q ss_pred ----------------------cHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCccccccC
Q psy12805 661 ----------------------KPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKPRE 702 (1429)
Q Consensus 661 ----------------------~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~~~ 702 (1429)
....|.+++..+..+||.-|..+|.++|.||..+..++....
T Consensus 262 ~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~m~y~G~~~i~~l~~~~~~~~~~~ 325 (361)
T 3r2g_A 262 QEAFLGQMHEWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQRKLNYVIVTQ 325 (361)
T ss_dssp HHHHTTCCSTTCCSCCCCEEEECBCCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHTCCEEECCS
T ss_pred hhhhhccccccccCCcceeecCCCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhCCeEEEEcc
Confidence 012477888999999999999999999999988888877654
No 92
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.46 E-value=7.1e-13 Score=158.18 Aligned_cols=195 Identities=15% Similarity=0.092 Sum_probs=133.9
Q ss_pred cceEEEccCCCCCcCC---cc-------CccchHHHHhhcc------CCCceEEEcc----cccc--ccHHHH----HHh
Q psy12805 1209 RGFIKYSRETAPYRPA---EK-------RLKDWDEIYATQH------VRKGLRIQAA----RCME--CGVPFC----QSS 1262 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~---~~-------rv~D~~el~~l~~------~pk~lvVIGa----GcIg--cE~a~c----~s~ 1262 (1429)
..++.+|||+.|..|. .. .+.+.++..++.. ..++++|||+ +|++ +|+++. +.+
T Consensus 101 ~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~ 180 (437)
T 3sx6_A 101 YDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKK 180 (437)
T ss_dssp CSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHH
Confidence 3458899999887652 11 2455665544321 1456788887 7888 787743 345
Q ss_pred CCCC-----cccccc--ccchh-hc-cchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEe--CCC---eeE
Q psy12805 1263 HGCP-----LGNIIP--KWNDL-IY-HNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEV--PNS---EKI 1326 (1429)
Q Consensus 1263 ~Gc~-----V~~iLp--~~d~l-vf-~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~--~gs---e~~ 1326 (1429)
.|+. |..+-+ ....+ +. ..+..+.+.+.+++.| +.++.++++|+. + ....... +++ .++
T Consensus 181 ~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~----~-~v~~~~~~~~g~~~~~~~ 255 (437)
T 3sx6_A 181 RGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVED----N-KMYVTQVDEKGETIKEMV 255 (437)
T ss_dssp TTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEET----T-EEEEEEECTTSCEEEEEE
T ss_pred cCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEEC----C-eEEEEecccCCccccceE
Confidence 6764 421111 11000 00 1357888899999988 456778887742 2 2222221 222 568
Q ss_pred EEecEEEEeccccCchhhhhhccCccccCCCCEEecCCCCcc-CCCCEEEeCCCCCC------------CCcHHHHHHHH
Q psy12805 1327 FKCDLVLLAMGFLGPERYIANELDLTLDPRSNYSTVEKTYLT-TVPRVYAAGDCRRG------------QSLVVWAISEG 1393 (1429)
Q Consensus 1327 ieaDlVLlAiG~~pp~~~Lle~lGLeld~~G~I~VD~~~~~T-SvPgVFAAGD~a~g------------~~lvv~Ai~qG 1393 (1429)
+++|+|++++|+.++ ..+.+..|+ .+++|+|.||+ +++| +.|+|||+|||+.. +.+.+.|+.||
T Consensus 256 i~~D~vv~~~g~~~~-~~~~~~~gl-~~~~G~i~Vd~-~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg 332 (437)
T 3sx6_A 256 LPVKFGMMIPAFKGV-PAVAGVEGL-CNPGGFVLVDE-HQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMV 332 (437)
T ss_dssp EECSEEEEECCEECC-HHHHTSTTT-BCTTSCBCBCT-TSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHH
T ss_pred EEEeEEEEcCCCcCc-hhhhccccc-cCCCCcEEeCh-hccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHH
Confidence 999999999999854 445555677 67889999998 7888 99999999999873 56899999999
Q ss_pred HHHHHHHHHHHhCCCCCC
Q psy12805 1394 RQAAREIDSFLMGTSTLP 1411 (1429)
Q Consensus 1394 r~AA~nI~~~L~g~~~~p 1411 (1429)
+.||.||.++|.|++..+
T Consensus 333 ~~aA~ni~~~l~g~~~~~ 350 (437)
T 3sx6_A 333 SAAVHNIKADLEGRKGEQ 350 (437)
T ss_dssp HHHHHHHHHHTTTSCCCC
T ss_pred HHHHHHHHHHhcCCCCCC
Confidence 999999999999988766
No 93
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.44 E-value=8.3e-13 Score=154.93 Aligned_cols=274 Identities=18% Similarity=0.194 Sum_probs=174.7
Q ss_pred cCCCCCCCCCCCcccc------cccceeeCCCCCccchHHHHHHHHHHHHHhCCcEEecCCCCCccccccCCCcccccce
Q psy12805 364 THDKPVDISEVEPAAE------IVKRFATGAMSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAI 437 (1429)
Q Consensus 364 ~~~~~i~~~~v~~~~~------i~~pf~i~aMS~GslS~ea~~aLA~aa~~~G~~~~tGEGg~~~~~~~~~~~~~~~~~I 437 (1429)
+....++.+||+..+. +..||+.++|...+-+ .||.++.+.|+.-... ...+++... ..|
T Consensus 23 p~~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~vs~~-----~lA~avA~aGGlg~i~-~~~s~e~~~--------~~i 88 (366)
T 4fo4_A 23 PAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVTEA-----RLAIALAQEGGIGFIH-KNMSIEQQA--------AQV 88 (366)
T ss_dssp CCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTCSH-----HHHHHHHHTTCEEEEC-SSSCHHHHH--------HHH
T ss_pred CCCCCCChhhcccceecccccccCCCEEeCCCCCCChH-----HHHHHHHHcCCceEee-cCCCHHHHH--------HHH
Confidence 3445677778876654 4579999999976543 7888888887754443 235555531 222
Q ss_pred eeccc-CCCCCChhhhccccchhhhcccCCCCCCCCCcccccchHHHHhccCCCCccccc---cCCCCCCCCCHHHHHHH
Q psy12805 438 KQVAS-GRFGVTSSYLAHADDLQIKMAQGAKPGEGGELPGYKVTKDIASTRHSVPGVGLI---SPPPHHDIYSIEDLAEL 513 (1429)
Q Consensus 438 ~Q~as-grfGv~~~~L~~a~~ieIk~gQGAKpG~GG~lpg~KV~~~iA~~r~~~pg~~Li---sP~~h~di~siedL~ql 513 (1429)
+++.. +++++.. +-|..+ ...+.+..+.. .|.+.| +..+| .+.+.+.
T Consensus 89 ~~vk~~~~l~vga-------------~vg~~~---------~~~~~~~~lie--aGvd~I~idta~G~-----~~~~~~~ 139 (366)
T 4fo4_A 89 HQVKISGGLRVGA-------------AVGAAP---------GNEERVKALVE--AGVDVLLIDSSHGH-----SEGVLQR 139 (366)
T ss_dssp HHHHTTTSCCCEE-------------ECCSCT---------TCHHHHHHHHH--TTCSEEEEECSCTT-----SHHHHHH
T ss_pred HHHHhcCceeEEE-------------EeccCh---------hHHHHHHHHHh--CCCCEEEEeCCCCC-----CHHHHHH
Confidence 22221 2221111 001111 11222222211 122222 23222 2467778
Q ss_pred HHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCC
Q psy12805 514 IYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRS 593 (1429)
Q Consensus 514 I~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~ 593 (1429)
|+++|+..|+.||++..+ .....|..+.++|||+|.+ |.+.|+... ......+|.|...+|.++.+.+...
T Consensus 140 I~~ik~~~p~v~Vi~G~v---~t~e~A~~a~~aGAD~I~v-G~gpGs~~~-tr~~~g~g~p~~~~l~~v~~~~~~~---- 210 (366)
T 4fo4_A 140 IRETRAAYPHLEIIGGNV---ATAEGARALIEAGVSAVKV-GIGPGSICT-TRIVTGVGVPQITAIADAAGVANEY---- 210 (366)
T ss_dssp HHHHHHHCTTCEEEEEEE---CSHHHHHHHHHHTCSEEEE-CSSCSTTBC-HHHHHCCCCCHHHHHHHHHHHHGGG----
T ss_pred HHHHHHhcCCCceEeeee---CCHHHHHHHHHcCCCEEEE-ecCCCCCCC-cccccCcccchHHHHHHHHHHHhhc----
Confidence 999999988899988743 3445678889999999999 433332111 1234568999999999888765333
Q ss_pred ceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCC-------------
Q psy12805 594 RVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAG------------- 660 (1429)
Q Consensus 594 ~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g------------- 660 (1429)
.++||++|||+++.|+++|+++||++|++|+.++- +.+||.....++....|.|-|
T Consensus 211 ~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~-----------t~Esp~~~~~~~g~~~k~y~gm~s~~am~~~~~~ 279 (366)
T 4fo4_A 211 GIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAG-----------TEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSD 279 (366)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT-----------BTTSSSCCEEETTEEEEEEECTTSHHHHCC----
T ss_pred CCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhc-----------CCCCCchhhhhCCceeEEeeccccHHHHhccccc
Confidence 58999999999999999999999999999996654 345776666554332222210
Q ss_pred ---------------c-------HHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCccccc
Q psy12805 661 ---------------K-------PEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKP 700 (1429)
Q Consensus 661 ---------------~-------~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~ 700 (1429)
+ .-.|.+++..+..+||.-|..+|.++|.||..+..++..
T Consensus 280 ry~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~glr~~~~y~g~~~~~~~~~~~~f~~~ 341 (366)
T 4fo4_A 280 RYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTKAQFVRI 341 (366)
T ss_dssp -----------CCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHHCCEEEC
T ss_pred chhccccccccccCCCcEEecCCCCCHHHHHHHHHHHHHHhhhccCcccHHHHHhCCeEEEE
Confidence 0 124678889999999999999999999999766655543
No 94
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.43 E-value=1.3e-12 Score=155.55 Aligned_cols=194 Identities=12% Similarity=0.151 Sum_probs=132.9
Q ss_pred cceEEEccCCCCCcCCc------cCccchHHHHhhcc------CCCceEEEcc----cccc--ccHHHHHH----hCCC-
Q psy12805 1209 RGFIKYSRETAPYRPAE------KRLKDWDEIYATQH------VRKGLRIQAA----RCME--CGVPFCQS----SHGC- 1265 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~~------~rv~D~~el~~l~~------~pk~lvVIGa----GcIg--cE~a~c~s----~~Gc- 1265 (1429)
..++.+|+|+.|..|.. ..+.+.++..++.. ..++++|+|+ +|++ +|+++..+ +.|.
T Consensus 98 ~d~liiAtG~~~~~pg~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~ 177 (430)
T 3h28_A 98 YDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIR 177 (430)
T ss_dssp CSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCG
T ss_pred CCEEEEcCCcccccCCCCCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCc
Confidence 34588999999877622 23455665554421 1345678887 4777 88775443 4564
Q ss_pred ---Ccccccccc--chh-hc-cchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEec
Q psy12805 1266 ---PLGNIIPKW--NDL-IY-HNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAM 1336 (1429)
Q Consensus 1266 ---~V~~iLp~~--d~l-vf-~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAi 1336 (1429)
+|..+-+.- ..+ .. ..+..+.+.+.+++.| +.++..+++|+. +.+......++.+++++|.|++++
T Consensus 178 ~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~-----~~v~~~~~~~~g~~i~~D~vv~a~ 252 (430)
T 3h28_A 178 YKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEP-----DKVIYEDLNGNTHEVPAKFTMFMP 252 (430)
T ss_dssp GGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS-----SEEEEECTTSCEEEEECSEEEEEC
T ss_pred cceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeC-----CeEEEEecCCCceEEeeeEEEECC
Confidence 332111110 000 00 1257888889999988 556888888832 222222233456789999999999
Q ss_pred cccCchhhhhhc-cCccccCCC-CEEecCCCCcc-CCCCEEEeCCCCCC------------CCcHHHHHHHHHHHHHHHH
Q psy12805 1337 GFLGPERYIANE-LDLTLDPRS-NYSTVEKTYLT-TVPRVYAAGDCRRG------------QSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1337 G~~pp~~~Lle~-lGLeld~~G-~I~VD~~~~~T-SvPgVFAAGD~a~g------------~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
|+.|+ ..+.+. .|+ .+++| +|.||+ +++| +.|+|||+|||+.. +.+.+.|+.||+.||+||.
T Consensus 253 G~~~~-~~l~~~~~gl-~~~~G~~i~Vd~-~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~ 329 (430)
T 3h28_A 253 SFQGP-EVVASAGDKV-ANPANKMVIVNR-CFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp EEECC-HHHHTTCTTT-BCTTTCCBCCCT-TSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred CCccc-hhHhhccccC-cCCCCCEEecCc-cccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 99954 333333 577 67889 999998 7888 99999999999873 5689999999999999999
Q ss_pred HHHhCCCCC
Q psy12805 1402 SFLMGTSTL 1410 (1429)
Q Consensus 1402 ~~L~g~~~~ 1410 (1429)
++|.|++..
T Consensus 330 ~~l~g~~~~ 338 (430)
T 3h28_A 330 NDIRNNPDK 338 (430)
T ss_dssp HHHTTCCCC
T ss_pred HHhcCCCCC
Confidence 999998764
No 95
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.43 E-value=5.4e-13 Score=159.11 Aligned_cols=124 Identities=9% Similarity=0.107 Sum_probs=96.9
Q ss_pred chHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccC--ccccCC
Q psy12805 1281 NNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELD--LTLDPR 1356 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lG--Leld~~ 1356 (1429)
....+.+++.++++| +.++..+++++ .+.......+++.+++++|+|++++|++|+ .++..++ +..+.+
T Consensus 200 ~~~~~~l~~~l~~~GV~~~~~~~v~~v~-----~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~--~~~~~~~~~l~~~~~ 272 (430)
T 3hyw_A 200 GASKRLVEDLFAERNIDWIANVAVKAIE-----PDKVIYEDLNGNTHEVPAKFTMFMPSFQGP--EVVASAGDKVANPAN 272 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEEC-----SSEEEEECTTSCEEEEECSEEEEECEEECC--HHHHTTCTTTBCTTT
T ss_pred HHHHHHHHHHHHhCCeEEEeCceEEEEe-----CCceEEEeeCCCceEeecceEEEeccCCCc--hHHHhcccccccCCc
Confidence 367788999999998 56788888883 233334445666789999999999999965 3444444 444566
Q ss_pred CCEEecCCCCc-cCCCCEEEeCCCCCC------------CCcHHHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy12805 1357 SNYSTVEKTYL-TTVPRVYAAGDCRRG------------QSLVVWAISEGRQAAREIDSFLMGTSTLPD 1412 (1429)
Q Consensus 1357 G~I~VD~~~~~-TSvPgVFAAGD~a~g------------~~lvv~Ai~qGr~AA~nI~~~L~g~~~~p~ 1412 (1429)
|+|.||+ ++| |+.|+|||+|||+.. |++.+.|.+||+.+|+||.+.|.|++..+.
T Consensus 273 g~i~vd~-~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~~~~ 340 (430)
T 3hyw_A 273 KMVIVNR-CFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYA 340 (430)
T ss_dssp CCBCCCT-TSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred eEEEecc-cccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 7788887 777 999999999999863 467899999999999999999999876543
No 96
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.42 E-value=1.6e-13 Score=167.41 Aligned_cols=185 Identities=14% Similarity=0.077 Sum_probs=135.2
Q ss_pred HHHHHHHHHHhCCC-CeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH-
Q psy12805 510 LAELIYDLKCANPN-ARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA- 587 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~-~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~- 587 (1429)
+.+.|+.+|+..|+ .||+++-+ .-...|..+.++|+|+|.+ |.+||+... ......||+|++.+|.++.+.+.
T Consensus 270 ~~~~i~~lk~~~~~~~~Vi~G~V---~t~~~a~~l~~aGad~I~V-g~~~g~~~~-~r~~~~~g~p~~~~l~~v~~~~~~ 344 (503)
T 1me8_A 270 QKITIGWIREKYGDKVKVGAGNI---VDGEGFRYLADAGADFIKI-GIGGGSICI-TREQKGIGRGQATAVIDVVAERNK 344 (503)
T ss_dssp HHHHHHHHHHHHGGGSCEEEEEE---CSHHHHHHHHHHTCSEEEE-CSSCSTTCC-STTTTCCCCCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhCCCCceEeeccc---cCHHHHHHHHHhCCCeEEe-cccCCcCcc-cccccCCCCchHHHHHHHHHHHHH
Confidence 56667888888777 89998844 3445678899999999999 776654322 22345899999999999987653
Q ss_pred ---hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccc---cccccccCCCCccceecCHHHHhhc---
Q psy12805 588 ---LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCT---MMRKCHLNTCPVGIATQDPELRKKF--- 658 (1429)
Q Consensus 588 ---~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~---~~r~c~~~~cP~giatqd~~lr~~~--- 658 (1429)
+.| .+++||++|||+|+.|++||++|||++|++|+.++.+..|. .+..+...+|..|+++..+....+|
T Consensus 345 ~~~~~~--~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~ 422 (503)
T 1me8_A 345 YFEETG--IYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLG 422 (503)
T ss_dssp HHHHHS--EECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC------
T ss_pred HhhhcC--CCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhccccCCCceEEECCeEEEeecCccchhHhhccccccc
Confidence 233 25899999999999999999999999999999776554433 3334444456666666544322222
Q ss_pred -------CCc-------HHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCcccccc
Q psy12805 659 -------AGK-------PEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKPR 701 (1429)
Q Consensus 659 -------~g~-------~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~~ 701 (1429)
..+ ...|.+++..|..||+..|..+|+++++||..+++++...
T Consensus 423 ~~~~~~~~eg~~~~~~~~~~v~~~~~~~~~~l~~~m~~~G~~~i~~l~~~~~~~~~~ 479 (503)
T 1me8_A 423 GKQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQSKAKITLVS 479 (503)
T ss_dssp --------CCCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHCCEEECC
T ss_pred cccceecccceeEecCCCCcHHHHHHHHHHHHHHHHHhcCcchHHHHHhCCCEEEEc
Confidence 100 1468899999999999999999999999996667766653
No 97
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.42 E-value=1.1e-12 Score=153.87 Aligned_cols=173 Identities=17% Similarity=0.200 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+.+.+.|+++|+.. +.||+++.+ .....|..+.++|+|+|.++...|+... ......+|.|...++.++.+.+.
T Consensus 131 ~~~~~~i~~i~~~~-~~~Vivg~v---~t~e~A~~l~~aGaD~I~VG~~~Gs~~~--tr~~~g~g~p~~~~i~~v~~~~~ 204 (361)
T 3khj_A 131 LNIIRTLKEIKSKM-NIDVIVGNV---VTEEATKELIENGADGIKVGIGPGSICT--TRIVAGVGVPQITAIEKCSSVAS 204 (361)
T ss_dssp HHHHHHHHHHHHHC-CCEEEEEEE---CSHHHHHHHHHTTCSEEEECSSCCTTCC--HHHHTCBCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-CCcEEEccC---CCHHHHHHHHHcCcCEEEEecCCCcCCC--cccccCCCCCcHHHHHHHHHHHh
Confidence 56778899999887 789999844 3455678899999999999544332111 11234678999999998887664
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCC-------
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAG------- 660 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g------- 660 (1429)
.. +++||++|||+++.|+++++++||++|++|+.++- +.+||..+...+....|.|-|
T Consensus 205 ~~----~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~-----------t~Esp~~~~~~~g~~~k~y~gm~s~~a~ 269 (361)
T 3khj_A 205 KF----GIPIIADGGIRYSGDIGKALAVGASSVMIGSILAG-----------TEESPGEKELIGDTVYKYYRGMGSVGAM 269 (361)
T ss_dssp HH----TCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTT-----------BTTSSCEEEEETTEEEEEC---------
T ss_pred hc----CCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhc-----------CCcCCcchhhcCCeEEEEeeccchHHHH
Confidence 43 48999999999999999999999999999996554 346777776555433222211
Q ss_pred -----------c-------H----------HHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCcccccc
Q psy12805 661 -----------K-------P----------EHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKPR 701 (1429)
Q Consensus 661 -----------~-------~----------e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~~ 701 (1429)
+ + -.|.+++..+..+||.-|..+|.++|.||..+..++...
T Consensus 270 ~~~~~~~y~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~gl~~~~~~~g~~~~~~~~~~~~~~~~~ 338 (361)
T 3khj_A 270 KSGSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKKSSYVEIT 338 (361)
T ss_dssp ------------------------CEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHCCEEECC
T ss_pred hccchhhhhcccccccccCCCccEEeCCCCCCHHHHHHHHHHHHHHhhhhcCCccHHHHHhCCeEEEEc
Confidence 0 1 136688899999999999999999999997666666543
No 98
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.39 E-value=8.2e-13 Score=160.81 Aligned_cols=183 Identities=20% Similarity=0.214 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+.+.+.|+.+|+.+|+.||+++-+ .....|..+.++|+|+|+++++.| +.... ...+.+|.|...++.++.+.+.
T Consensus 263 ~~~~e~i~~i~~~~p~~pvi~g~~---~t~e~a~~l~~~G~d~I~v~~~~G-~~~~~-~~~~~~g~p~~~~l~~v~~~~~ 337 (494)
T 1vrd_A 263 RRVIETLEMIKADYPDLPVVAGNV---ATPEGTEALIKAGADAVKVGVGPG-SICTT-RVVAGVGVPQLTAVMECSEVAR 337 (494)
T ss_dssp HHHHHHHHHHHHHCTTSCEEEEEE---CSHHHHHHHHHTTCSEEEECSSCS-TTCHH-HHHHCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCceEEeCCc---CCHHHHHHHHHcCCCEEEEcCCCC-ccccc-cccCCCCccHHHHHHHHHHHHh
Confidence 566788999999988899999843 344567888999999999976644 32221 2345679999999999988764
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhcc---ccccccccCCCCccceecC--------HHHH-
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGC---TMMRKCHLNTCPVGIATQD--------PELR- 655 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc---~~~r~c~~~~cP~giatqd--------~~lr- 655 (1429)
.. +++||++|||+++.|++||+++|||+|++|++++..-+| ...+.+..++|+.|+++.. ..+.
T Consensus 338 ~~----~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~~~~~~~ 413 (494)
T 1vrd_A 338 KY----DVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQE 413 (494)
T ss_dssp TT----TCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC----------------
T ss_pred hc----CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccccchhhc
Confidence 32 589999999999999999999999999999988776544 4456677788999988632 2221
Q ss_pred --hhc-CCcH-------HHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCcccc
Q psy12805 656 --KKF-AGKP-------EHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLK 699 (1429)
Q Consensus 656 --~~~-~g~~-------e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~ 699 (1429)
++| ..+. ..+.++++.+.++|+..|..+|.+++.||.....++.
T Consensus 414 ~~~~~~~~g~~~~~~~~~~v~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~~~~~ 467 (494)
T 1vrd_A 414 GENKFVPEGIEGMVPYKGTVKDVVHQLVGGLRSGMGYIGARTIKELQEKAVFVK 467 (494)
T ss_dssp ---------CBCCEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHCCEEE
T ss_pred ccccccCCcceEccCcCCCHHHHHHHHHHHHHHHhhhcCCCCHHHHHhhCCEEE
Confidence 111 1110 2378999999999999999999999999855444443
No 99
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.35 E-value=2.5e-12 Score=155.24 Aligned_cols=192 Identities=13% Similarity=0.059 Sum_probs=129.0
Q ss_pred cceEEEccCCCC-CcCC-----ccCccchHHHHhh------------ccCCCceEEEccccccccHHHHHH---------
Q psy12805 1209 RGFIKYSRETAP-YRPA-----EKRLKDWDEIYAT------------QHVRKGLRIQAARCMECGVPFCQS--------- 1261 (1429)
Q Consensus 1209 ~gf~kiAtGs~P-~~p~-----~~rv~D~~el~~l------------~~~pk~lvVIGaGcIgcE~a~c~s--------- 1261 (1429)
..++.+|||+.| ..|+ ...+.+..++... ...+++++|||+|.++||++..+.
T Consensus 95 ~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~t 174 (460)
T 1cjc_A 95 YHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKT 174 (460)
T ss_dssp SSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTS
T ss_pred cCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccc
Confidence 456889999985 4442 2345666666421 114689999999999999999887
Q ss_pred -----------hCCC-Ccccc--------------------ccccchhhccch-----------------HHHHHHHHHH
Q psy12805 1262 -----------SHGC-PLGNI--------------------IPKWNDLIYHNN-----------------WSEALNQLLQ 1292 (1429)
Q Consensus 1262 -----------~~Gc-~V~~i--------------------Lp~~d~lvf~~e-----------------~~~al~~~Le 1292 (1429)
..|+ +|..+ +|..+..+...+ ..+.+.+.++
T Consensus 175 di~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 254 (460)
T 1cjc_A 175 DITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTAT 254 (460)
T ss_dssp CCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHH
Confidence 4676 45222 222111000011 2233334444
Q ss_pred h--------------CC--CCCCcEEEEEEEeecCCC-ceEEEEe----------------CCCeeEEEecEEEEecccc
Q psy12805 1293 T--------------NN--FPAGIKTVKVEWTKDATG-RWKMDEV----------------PNSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1293 ~--------------~G--~~~gv~v~~Ve~~k~~~G-~~~~v~~----------------~gse~~ieaDlVLlAiG~~ 1339 (1429)
+ .+ +.++..+++|... +++ ++..+.+ +|+.++++||+||+|+|++
T Consensus 255 ~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~--~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~ 332 (460)
T 1cjc_A 255 EKPGVEEAARRASASRAWGLRFFRSPQQVLPS--PDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYK 332 (460)
T ss_dssp SCCCHHHHHHHHTCSEEEEEECSEEEEEEEEC--TTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEE
T ss_pred hccccccccCCCCCCceEEEECCCChheEEcC--CCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCC
Confidence 4 44 5566777777542 223 3221111 2444689999999999999
Q ss_pred CchhhhhhccCc-cccCCCCEEecCCCCccC-CCCEEEeCCCCCCCC-cHHHHHHHHHHHHHHHHHHHhCCC
Q psy12805 1340 GPERYIANELDL-TLDPRSNYSTVEKTYLTT-VPRVYAAGDCRRGQS-LVVWAISEGRQAAREIDSFLMGTS 1408 (1429)
Q Consensus 1340 pp~~~Lle~lGL-eld~~G~I~VD~~~~~TS-vPgVFAAGD~a~g~~-lvv~Ai~qGr~AA~nI~~~L~g~~ 1408 (1429)
|+. + .|+ +++++|.|.+|+ .++|+ +|+|||+|||+.++. .+..|+.+|+.+|.+|..+|.+..
T Consensus 333 p~~--l---~gl~~~d~~g~i~vn~-~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~~~ 398 (460)
T 1cjc_A 333 SRP--I---DPSVPFDPKLGVVPNM-EGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKAGH 398 (460)
T ss_dssp CCC--C---CTTSCCBTTTTBCCEE-TTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCC--C---CCCcccccCCCeeECC-CCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 543 3 678 889888999997 78999 799999999998766 467999999999999999998754
No 100
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.34 E-value=6.1e-13 Score=151.11 Aligned_cols=184 Identities=15% Similarity=0.123 Sum_probs=115.3
Q ss_pred ceEEEccC--CCCCcCCccCc-------cchHHHHh-hccCCCceEEEccccccccHHHHHHhCCCCcccccc---ccch
Q psy12805 1210 GFIKYSRE--TAPYRPAEKRL-------KDWDEIYA-TQHVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIP---KWND 1276 (1429)
Q Consensus 1210 gf~kiAtG--s~P~~p~~~rv-------~D~~el~~-l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp---~~d~ 1276 (1429)
.++.+|+| +.|..|..... ....+..+ ....+++++|+|+|.+++|++..+...| +|..+.+ .+.+
T Consensus 122 d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~ 200 (357)
T 4a9w_A 122 RAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLA 200 (357)
T ss_dssp EEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCC
T ss_pred CEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecc
Confidence 34789999 46555532111 11111111 1224689999999999999999998877 4522221 1111
Q ss_pred h-hccchHHHHHHHHHH----------------------------hCC-CCCCcEEEEEEEeecCCCceEEEEeCCCeeE
Q psy12805 1277 L-IYHNNWSEALNQLLQ----------------------------TNN-FPAGIKTVKVEWTKDATGRWKMDEVPNSEKI 1326 (1429)
Q Consensus 1277 l-vf~~e~~~al~~~Le----------------------------~~G-~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ 1326 (1429)
. .....+.+.+.+.+. ..+ +.....+.+++. ++ +...+ .++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~----~~----v~~~~-g~~ 271 (357)
T 4a9w_A 201 DDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGVLAAVPPPARFSP----TG----MQWAD-GTE 271 (357)
T ss_dssp TTCCTHHHHTC----------------------CBCCCHHHHHHHHTTCCCEECCCSEEET----TE----EECTT-SCE
T ss_pred hhhcCccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCceEEecCcceEeC----Ce----eEECC-CCE
Confidence 0 111122222222221 122 222222223311 11 22333 347
Q ss_pred EEecEEEEeccccCchhhhhhccCccccCCCCEEecCCC--CccCCCCEEEeC--CCCC-CCCcHHHHHHHHHHHHHHHH
Q psy12805 1327 FKCDLVLLAMGFLGPERYIANELDLTLDPRSNYSTVEKT--YLTTVPRVYAAG--DCRR-GQSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1327 ieaDlVLlAiG~~pp~~~Lle~lGLeld~~G~I~VD~~~--~~TSvPgVFAAG--D~a~-g~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
++||+|++++|++ |+..+++++|++ +++|+|.||+ + ++|+.|+|||+| ||+. .+.++..|+.+|+.||.+|.
T Consensus 272 i~~D~vi~a~G~~-p~~~~l~~~gl~-~~~G~i~vd~-~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~ 348 (357)
T 4a9w_A 272 RAFDAVIWCTGFR-PALSHLKGLDLV-TPQGQVEVDG-SGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVT 348 (357)
T ss_dssp EECSEEEECCCBC-CCCGGGTTTTCB-CTTSCBCBCT-TSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHH
T ss_pred ecCCEEEECCCcC-CCCcccCccccc-CCCCCccccC-CcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHH
Confidence 9999999999999 556788999999 8889999998 5 899999999999 5665 56788889999999999999
Q ss_pred HHHhC
Q psy12805 1402 SFLMG 1406 (1429)
Q Consensus 1402 ~~L~g 1406 (1429)
++|.+
T Consensus 349 ~~l~g 353 (357)
T 4a9w_A 349 AYCAD 353 (357)
T ss_dssp HHTC-
T ss_pred HHHHh
Confidence 99988
No 101
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.34 E-value=1.6e-12 Score=152.59 Aligned_cols=123 Identities=16% Similarity=0.136 Sum_probs=90.2
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccCccccCCCCE
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELDLTLDPRSNY 1359 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~~G~I 1359 (1429)
.+.+.+.+.+++++ +..+.++..++.. .++. . +...+ .+++++|+|++++|++|+ .+++++|+ .+++|+|
T Consensus 203 ~~~~~~~~~l~~~gi~v~~~~~v~~v~~~--~~~~-~-v~~~~-g~~i~~D~vi~~~g~~~~--~~~~~~gl-~~~~G~i 274 (401)
T 3vrd_B 203 GWERLYGFGTENALIEWHPGPDAAVVKTD--TEAM-T-VETSF-GETFKAAVINLIPPQRAG--KIAQSASL-TNDSGWC 274 (401)
T ss_dssp HHHHHSCTTSTTCSEEEECTTTTCEEEEE--TTTT-E-EEETT-SCEEECSEEEECCCEEEC--HHHHHTTC-CCTTSSB
T ss_pred HHHHHHHHHHHhcCcEEEeCceEEEEEec--ccce-E-EEcCC-CcEEEeeEEEEecCcCCc--hhHhhccc-cccCCCE
Confidence 45555555555555 3445555555432 2222 2 23333 347999999999999854 57888898 4778999
Q ss_pred EecCCCC-ccCCCCEEEeCCCCCC---CCcHHHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy12805 1360 STVEKTY-LTTVPRVYAAGDCRRG---QSLVVWAISEGRQAAREIDSFLMGTSTLPD 1412 (1429)
Q Consensus 1360 ~VD~~~~-~TSvPgVFAAGD~a~g---~~lvv~Ai~qGr~AA~nI~~~L~g~~~~p~ 1412 (1429)
.||+.++ .|+.|+|||+|||+.. +++.+.|.+||+++|+||.+.|.|+++.+.
T Consensus 275 ~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~~~~~~ 331 (401)
T 3vrd_B 275 PVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGEEPGTP 331 (401)
T ss_dssp CBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred EECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 9998545 5899999999999864 578999999999999999999999876554
No 102
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.30 E-value=7.9e-12 Score=143.79 Aligned_cols=190 Identities=9% Similarity=0.104 Sum_probs=127.0
Q ss_pred ceEEEccCCCC--CcCCccCccchHHHHhhccC-CCceEEEccccccccHHHHHHhCCCCcc------ccc-cccchh-h
Q psy12805 1210 GFIKYSRETAP--YRPAEKRLKDWDEIYATQHV-RKGLRIQAARCMECGVPFCQSSHGCPLG------NII-PKWNDL-I 1278 (1429)
Q Consensus 1210 gf~kiAtGs~P--~~p~~~rv~D~~el~~l~~~-pk~lvVIGaGcIgcE~a~c~s~~Gc~V~------~iL-p~~d~l-v 1278 (1429)
.++.+|+|+.+ ..|. ....++.++.+.... .++++|+|+|.++++++..+...|.+|. .++ +.++.- .
T Consensus 133 d~vVlAtG~~~~p~ip~-~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~ 211 (369)
T 3d1c_A 133 DYIFVATGDYNFPKKPF-KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVR 211 (369)
T ss_dssp EEEEECCCSTTSBCCCS-SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTS
T ss_pred CEEEECCCCCCccCCCC-CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCcc
Confidence 45889999864 3443 334444444443333 3589999999999999999999998883 223 122221 1
Q ss_pred ccchHHHHHHHHHHhCC---CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccCccccC
Q psy12805 1279 YHNNWSEALNQLLQTNN---FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELDLTLDP 1355 (1429)
Q Consensus 1279 f~~e~~~al~~~Le~~G---~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~ 1355 (1429)
+...+.+.+.+.+++.| +..+..+.+++.. ++..... ..++++...+|.||+++|++| +..++.+.+++ ++
T Consensus 212 ~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~---~~~~~v~-~~~g~~~~~~d~vi~a~G~~~-~~~~~~~~~~~-~~ 285 (369)
T 3d1c_A 212 LSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFN---NGQYHIS-FDSGQSVHTPHEPILATGFDA-TKNPIVQQLFV-TT 285 (369)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEE---TTEEEEE-ESSSCCEEESSCCEECCCBCG-GGSHHHHHHSC-CT
T ss_pred CCHHHHHHHHHHHhhCCcEEEecCcEEEEEEec---CCceEEE-ecCCeEeccCCceEEeeccCC-ccchhhhhhcc-CC
Confidence 33456678888888774 4457777777542 2322222 333333445699999999995 44455555677 77
Q ss_pred CCCEEecCCCCccCCCCEEEeCCCCCCCC----cHHHHHHHHHHHHHHHHHHHhC
Q psy12805 1356 RSNYSTVEKTYLTTVPRVYAAGDCRRGQS----LVVWAISEGRQAAREIDSFLMG 1406 (1429)
Q Consensus 1356 ~G~I~VD~~~~~TSvPgVFAAGD~a~g~~----lvv~Ai~qGr~AA~nI~~~L~g 1406 (1429)
+|++.||+..++|+.|+|||+|||+..+. .+..|.+||+.+|++|...+..
T Consensus 286 ~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~~~~ 340 (369)
T 3d1c_A 286 NQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGL 340 (369)
T ss_dssp TSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHHTTC
T ss_pred CCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcccCC
Confidence 89999998678899999999999987432 3556778899999998876643
No 103
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.25 E-value=2.4e-11 Score=143.26 Aligned_cols=181 Identities=13% Similarity=0.074 Sum_probs=125.1
Q ss_pred cceEEEccCCCCCcCCcc-------CccchHHHHhhc----cCCCceEEEcccc-------------------------c
Q psy12805 1209 RGFIKYSRETAPYRPAEK-------RLKDWDEIYATQ----HVRKGLRIQAARC-------------------------M 1252 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~~~-------rv~D~~el~~l~----~~pk~lvVIGaGc-------------------------I 1252 (1429)
..++.+|+|+.|..|... .+.++++...+. ...++.+|+|+|. +
T Consensus 102 ~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~ 181 (409)
T 3h8l_A 102 YDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGP 181 (409)
T ss_dssp CSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHH
T ss_pred CCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCH
Confidence 345889999988765211 223333333221 1235677999992 2
Q ss_pred cccHHHH----HHhCCC----Ccc-----ccccccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEE
Q psy12805 1253 ECGVPFC----QSSHGC----PLG-----NIIPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKM 1317 (1429)
Q Consensus 1253 gcE~a~c----~s~~Gc----~V~-----~iLp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~ 1317 (1429)
++|+++. +.+.|. +|. .++|.++. ++.+.+.+.+++.| +..+.++++++. ++
T Consensus 182 ~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~~l~~~~~-----~~~~~~~~~l~~~gV~~~~~~~v~~i~~----~~---- 248 (409)
T 3h8l_A 182 VFEMSLMLHGYFKKKGMLDKVHVTVFSPGEYLSDLSP-----NSRKAVASIYNQLGIKLVHNFKIKEIRE----HE---- 248 (409)
T ss_dssp HHHHHHHHHHHHHTTTCTTTEEEEEECSSSSSTTBCH-----HHHHHHHHHHHHHTCEEECSCCEEEECS----SE----
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEEEeCCccccccCH-----HHHHHHHHHHHHCCCEEEcCCceEEECC----Ce----
Confidence 4566643 334563 441 14444443 78899999999888 455777777732 22
Q ss_pred EEeCCCeeEEEecEEEEeccccCchhhhhhccCcc-ccCCCCEEecCCCCcc-CCCCEEEeCCCCC--CCCcHHHHHHHH
Q psy12805 1318 DEVPNSEKIFKCDLVLLAMGFLGPERYIANELDLT-LDPRSNYSTVEKTYLT-TVPRVYAAGDCRR--GQSLVVWAISEG 1393 (1429)
Q Consensus 1318 v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLe-ld~~G~I~VD~~~~~T-SvPgVFAAGD~a~--g~~lvv~Ai~qG 1393 (1429)
+...++ ++++||+|++++|+.|+ .+++.+++. .+++|+|.||+ +++| +.|+|||+|||+. .+.++..|..||
T Consensus 249 v~~~~g-~~~~~D~vi~a~G~~~~--~~l~~~~~~l~~~~G~i~vd~-~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~ 324 (409)
T 3h8l_A 249 IVDEKG-NTIPADITILLPPYTGN--PALKNSTPDLVDDGGFIPTDL-NMVSIKYDNVYAVGDANSMTVPKLGYLAVMTG 324 (409)
T ss_dssp EEETTS-CEEECSEEEEECCEECC--HHHHTSCGGGSCTTSCBCBBT-TSBBSSCTTEEECGGGBTTCCSCCHHHHHHHH
T ss_pred EEECCC-CEEeeeEEEECCCCCcc--HHHHhccccCcCCCCCEEeCc-ccccCCCCCEEEeehhccCCCCcHHHHHHHHH
Confidence 223333 47999999999999964 466766333 36789999997 8888 9999999999986 478999999999
Q ss_pred HHHHHHHHHHHhC
Q psy12805 1394 RQAAREIDSFLMG 1406 (1429)
Q Consensus 1394 r~AA~nI~~~L~g 1406 (1429)
+.||.+|..+|.+
T Consensus 325 ~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 325 RIAAQHLANRLGV 337 (409)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999943
No 104
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.22 E-value=3.3e-11 Score=147.42 Aligned_cols=173 Identities=16% Similarity=0.159 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+.+.++|+++|+.+|+.||+++- +.....|..+.++|+|+|.+ |.++|+... -.....+|.|...++.++.+.+.
T Consensus 282 ~~v~~~i~~i~~~~~~~~vi~g~---v~t~e~a~~~~~aGad~i~v-g~g~gsi~~-~~~~~g~g~p~~~~l~~v~~~~~ 356 (511)
T 3usb_A 282 QGVIDKVKEVRAKYPSLNIIAGN---VATAEATKALIEAGANVVKV-GIGPGSICT-TRVVAGVGVPQLTAVYDCATEAR 356 (511)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEE---ECSHHHHHHHHHHTCSEEEE-CSSCSTTCC-HHHHHCCCCCHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHhCCCceEEeee---eccHHHHHHHHHhCCCEEEE-CCCCccccc-cccccCCCCCcHHHHHHHHHHHH
Confidence 56778999999999889999984 45556788899999999998 443333111 12345789999999999988775
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhh----------
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKK---------- 657 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~---------- 657 (1429)
.. +++||++|||+++.|++||+++||++|.+|++++.+. +||..+..++....+.
T Consensus 357 ~~----~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~~~~-----------es~g~~~~~~g~~~k~~~gm~s~~a~ 421 (511)
T 3usb_A 357 KH----GIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAGVA-----------ESPGETEIYQGRQFKVYRGMGSVGAM 421 (511)
T ss_dssp TT----TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBT-----------TSSSCEEECSSSEEEC----------
T ss_pred hC----CCcEEEeCCCCCHHHHHHHHHhCchhheecHHHhcCc-----------cCchhhhhccCeeeeeeeccccHHHH
Confidence 44 4899999999999999999999999999999665433 3554433333221111
Q ss_pred ----------------cCCcHH-------HHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCccccc
Q psy12805 658 ----------------FAGKPE-------HVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKP 700 (1429)
Q Consensus 658 ----------------~~g~~e-------~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~ 700 (1429)
+..+.+ .|..++..+..+||..|..+|.++++||..+..++..
T Consensus 422 ~~~~~~r~~~~~~~~~~~eG~~~~~~~~~~~~~~~~~~~~~lr~~m~~~G~~~i~~l~~~~~~~~~ 487 (511)
T 3usb_A 422 EKGSKDRYFQEGNKKLVPEGIEGRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLRENAQFIRM 487 (511)
T ss_dssp ------------------------CBCCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHCCEEEC
T ss_pred hcccccchhccccccccCCCcEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcccHHHHHhCCeEEEE
Confidence 111112 2678899999999999999999999998655555443
No 105
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.22 E-value=1.3e-11 Score=148.97 Aligned_cols=189 Identities=11% Similarity=0.086 Sum_probs=124.4
Q ss_pred cceEEEccCCC-CCcCC-----ccCccchHHHHh-----------hc-cCCCceEEEccccccccHHHHHHhC-------
Q psy12805 1209 RGFIKYSRETA-PYRPA-----EKRLKDWDEIYA-----------TQ-HVRKGLRIQAARCMECGVPFCQSSH------- 1263 (1429)
Q Consensus 1209 ~gf~kiAtGs~-P~~p~-----~~rv~D~~el~~-----------l~-~~pk~lvVIGaGcIgcE~a~c~s~~------- 1263 (1429)
..++.+|||+. |..+. ...+.+..++.. +. ..+++++|+|+|.++||++..++..
T Consensus 97 ~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~t 176 (456)
T 1lqt_A 97 YDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLART 176 (456)
T ss_dssp SSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTS
T ss_pred CCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCC
Confidence 45689999996 45431 223556666532 11 1468999999999999999988753
Q ss_pred -------------CC-Cc------cccccccch--------------hhccchH------------------HHHHHHHH
Q psy12805 1264 -------------GC-PL------GNIIPKWND--------------LIYHNNW------------------SEALNQLL 1291 (1429)
Q Consensus 1264 -------------Gc-~V------~~iLp~~d~--------------lvf~~e~------------------~~al~~~L 1291 (1429)
|+ +| ..+.+.|.. .+...++ .+.+.+.+
T Consensus 177 di~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 256 (456)
T 1lqt_A 177 DIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYA 256 (456)
T ss_dssp CCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHh
Confidence 44 45 122111110 0000111 23444444
Q ss_pred Hh------CC--CCCCcEEEEEEEeecCCCc---eEEEE--------------eCCCeeEEEecEEEEeccccCchhhhh
Q psy12805 1292 QT------NN--FPAGIKTVKVEWTKDATGR---WKMDE--------------VPNSEKIFKCDLVLLAMGFLGPERYIA 1346 (1429)
Q Consensus 1292 e~------~G--~~~gv~v~~Ve~~k~~~G~---~~~v~--------------~~gse~~ieaDlVLlAiG~~pp~~~Ll 1346 (1429)
++ ++ +.++..++++... ++ +.... .+|+.++++||+||+|+|++|+. +
T Consensus 257 ~~~~~~~~~gv~i~~~~~~~~i~~~----~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~--l- 329 (456)
T 1lqt_A 257 DREPRPGHRRMVFRFLTSPIEIKGK----RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP--T- 329 (456)
T ss_dssp TCC-CTTSEEEEEECSEEEEEEECS----SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC--C-
T ss_pred hcCCCCCCceEEEEeCCCCeEEecC----CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC--C-
Confidence 44 34 4556677777431 22 22211 12334679999999999999543 3
Q ss_pred hccCccccCCCCEEecCCCCc-cCCCCEEEeCCCCCCCC-cHHHHHHHHHHHHHHHHHHHhCC
Q psy12805 1347 NELDLTLDPRSNYSTVEKTYL-TTVPRVYAAGDCRRGQS-LVVWAISEGRQAAREIDSFLMGT 1407 (1429)
Q Consensus 1347 e~lGLeld~~G~I~VD~~~~~-TSvPgVFAAGD~a~g~~-lvv~Ai~qGr~AA~nI~~~L~g~ 1407 (1429)
.|++++++|+|.+|+ .++ |+.|+|||+|||++++. .+..|+.+|+.+|.+|..+|.+.
T Consensus 330 --~gl~~d~~g~i~vn~-~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~~~ 389 (456)
T 1lqt_A 330 --PGLPFDDQSGTIPNV-GGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNA 389 (456)
T ss_dssp --TTSCCBTTTTBCCEE-TTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCcccCCCCeeECC-CCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 478888889999987 677 89999999999988776 46689999999999999998764
No 106
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.21 E-value=7.2e-11 Score=144.51 Aligned_cols=177 Identities=16% Similarity=0.120 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+...+.|+.+|+..|+.||++|-+ .....|..+.++|+|+|+++.+.|++... .....+|.|...++..+.+...
T Consensus 281 ~~~~~~i~~i~~~~~~~pvi~~~v---~t~~~a~~l~~aGad~I~vg~~~G~~~~t--~~~~~~g~~~~~~~~~~~~~~~ 355 (514)
T 1jcn_A 281 VYQIAMVHYIKQKYPHLQVIGGNV---VTAAQAKNLIDAGVDGLRVGMGCGSICIT--QEVMACGRPQGTAVYKVAEYAR 355 (514)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEE---CSHHHHHHHHHHTCSEEEECSSCSCCBTT--BCCCSCCCCHHHHHHHHHHHHG
T ss_pred hhHHHHHHHHHHhCCCCceEeccc---chHHHHHHHHHcCCCEEEECCCCCccccc--ccccCCCccchhHHHHHHHHHh
Confidence 446678999999988899999833 44556888999999999995444543222 2234589999888888777654
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhcccccccc---ccCCCCccceecCHHHH-----hhc-
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKC---HLNTCPVGIATQDPELR-----KKF- 658 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c---~~~~cP~giatqd~~lr-----~~~- 658 (1429)
.. +++||++|||+++.|++||+++||++|++|++++.+-.|.....+ ..-+|..|+.+.+...+ .++
T Consensus 356 ~~----~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~ 431 (514)
T 1jcn_A 356 RF----GVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYF 431 (514)
T ss_dssp GG----TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTTSSCC--------------------------------
T ss_pred hC----CCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhccccchhhc
Confidence 33 589999999999999999999999999999977654432222112 12234444443221110 000
Q ss_pred C-----CcHHH----------HHHHHHHHHHHHHHHHHhcCCCChhhhcC
Q psy12805 659 A-----GKPEH----------VINYLFMLAEEVRTHMAKLGIRKFADLVG 693 (1429)
Q Consensus 659 ~-----g~~e~----------v~ny~~~l~~eLr~iMa~mGi~sl~ElvG 693 (1429)
. ..++. +.+++..|..||+..|..+|+++++||..
T Consensus 432 ~~~~~~~~~~gv~~~~~~~g~~~~~i~~l~~~l~~~m~~~G~~~i~~l~~ 481 (514)
T 1jcn_A 432 SEGDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRS 481 (514)
T ss_dssp ------------------CCCHHHHHHHHHHHHHHHHHHHTCSBHHHHHH
T ss_pred cccccceecccceecCCCcccHHHHHHHHHHHHHHHHHhhCcccHHHHHh
Confidence 0 01233 38999999999999999999999999843
No 107
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.21 E-value=4.2e-11 Score=145.83 Aligned_cols=174 Identities=17% Similarity=0.159 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+.+.+.|+++|+.+|++||+++-+ .....|..+.++|||+|.+....|+.. .......+|.|...++.++.+.+.
T Consensus 255 ~~~~~~v~~i~~~~p~~~Vi~g~v---~t~e~a~~l~~aGaD~I~vg~g~Gs~~--~t~~~~g~g~p~~~~l~~v~~~~~ 329 (490)
T 4avf_A 255 KGVIERVRWVKQTFPDVQVIGGNI---ATAEAAKALAEAGADAVKVGIGPGSIC--TTRIVAGVGVPQISAIANVAAALE 329 (490)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEE---CSHHHHHHHHHTTCSEEEECSSCSTTC--HHHHHTCBCCCHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHCCCceEEEeee---CcHHHHHHHHHcCCCEEEECCCCCcCC--CccccCCCCccHHHHHHHHHHHhc
Confidence 567789999999988899999843 344567889999999999954332211 112245688999999999988763
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcC--------
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFA-------- 659 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~-------- 659 (1429)
.. .++||++|||+|+.|+++|+++||++|.+|++++. +.+||..+...+....|.|-
T Consensus 330 ~~----~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~~~~-----------~~Esp~~~~~~~g~~~k~~~gm~s~~a~ 394 (490)
T 4avf_A 330 GT----GVPLIADGGIRFSGDLAKAMVAGAYCVMMGSMFAG-----------TEEAPGEIELFQGRSYKSYRGMGSLGAM 394 (490)
T ss_dssp TT----TCCEEEESCCCSHHHHHHHHHHTCSEEEECTTTTT-----------BTTSSSCEEEETTEEEEC----------
T ss_pred cC----CCcEEEeCCCCCHHHHHHHHHcCCCeeeecHHHhc-----------CCCCCCceEeECCeEeeeecCcccHHHH
Confidence 32 58999999999999999999999999999996543 34577776544433222221
Q ss_pred -----------------------CcHH-------HHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCcccccc
Q psy12805 660 -----------------------GKPE-------HVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKPR 701 (1429)
Q Consensus 660 -----------------------g~~e-------~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~~ 701 (1429)
.+.+ .|.+++..|..+||..|..+|.++|+||..+..++...
T Consensus 395 ~~~~~~~~r~~~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~i~~l~~~~~~~~~~ 466 (490)
T 4avf_A 395 SGSQGSSDRYFQDASAGAEKLVPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQPQFVRIT 466 (490)
T ss_dssp -----------------------------CBCCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCEEEEC
T ss_pred hhcccccchhhcccccccccccCCCcEEcCCcCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhCCEEEEEc
Confidence 1111 46689999999999999999999999998777766554
No 108
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.18 E-value=2.6e-11 Score=153.21 Aligned_cols=183 Identities=16% Similarity=0.155 Sum_probs=131.3
Q ss_pred ceEEEccCCCCC--------cC-----CccCccchHHHHhhcc-CCCceEEEc--cccccccHHHHHHhCCCCcccc---
Q psy12805 1210 GFIKYSRETAPY--------RP-----AEKRLKDWDEIYATQH-VRKGLRIQA--ARCMECGVPFCQSSHGCPLGNI--- 1270 (1429)
Q Consensus 1210 gf~kiAtGs~P~--------~p-----~~~rv~D~~el~~l~~-~pk~lvVIG--aGcIgcE~a~c~s~~Gc~V~~i--- 1270 (1429)
.++.+|||+.|. .| ...++.+..++++... ..++++|+| +|.++||++..+...|++|..+
T Consensus 478 d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~ 557 (690)
T 3k30_A 478 EHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPG 557 (690)
T ss_dssp CEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecc
Confidence 467788888743 33 2235667777776532 235799999 9999999999999999988333
Q ss_pred ---ccccchhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEE-eCCCeeEEEecEEEEeccccCchhh
Q psy12805 1271 ---IPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDE-VPNSEKIFKCDLVLLAMGFLGPERY 1344 (1429)
Q Consensus 1271 ---Lp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~-~~gse~~ieaDlVLlAiG~~pp~~~ 1344 (1429)
++..++ ......+.+.+++.| +.++.++++++. ++ ..... ..+++++++||.||+|+|++ |+..
T Consensus 558 ~~l~~~~~~----~~~~~~l~~~l~~~GV~i~~~~~V~~i~~----~~-~~v~~~~~~~~~~i~aD~VV~A~G~~-p~~~ 627 (690)
T 3k30_A 558 AQVSSWTNN----TFEVNRIQRRLIENGVARVTDHAVVAVGA----GG-VTVRDTYASIERELECDAVVMVTARL-PREE 627 (690)
T ss_dssp SSTTGGGGG----GTCHHHHHHHHHHTTCEEEESEEEEEEET----TE-EEEEETTTCCEEEEECSEEEEESCEE-ECCH
T ss_pred ccccccccc----chhHHHHHHHHHHCCCEEEcCcEEEEEEC----Ce-EEEEEccCCeEEEEECCEEEECCCCC-CChH
Confidence 232221 355777888888888 456777777742 22 22222 24566789999999999999 4556
Q ss_pred hhhccCccccCCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC
Q psy12805 1345 IANELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFLMGTSTLPDVGG 1415 (1429)
Q Consensus 1345 Lle~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g~~~~p~~g~ 1415 (1429)
|++.++.. +. +|+.|+|||+|||+.. ..+..|+.||+.||.+|..+|.+++..|....
T Consensus 628 l~~~l~~~----~~--------~t~~~~VyaiGD~~~~-~~~~~A~~~g~~aa~~i~~~l~g~~~~p~~~~ 685 (690)
T 3k30_A 628 LYLDLVAR----RD--------AGEIASVRGIGDAWAP-GTIAAAVWSGRRAAEEFDAVLPSNDEVPFRRE 685 (690)
T ss_dssp HHHHHHHH----HH--------HTSCSEEEECGGGTSC-BCHHHHHHHHHHHHHHTTCCCCCTTSCSSCCC
T ss_pred HHHHHhhh----hc--------ccCCCCEEEEeCCCch-hhHHHHHHHHHHHHHHHHhhccCCCCCCcChh
Confidence 76654322 11 7999999999999874 56667999999999999999999887776543
No 109
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.17 E-value=4.1e-11 Score=146.05 Aligned_cols=173 Identities=17% Similarity=0.183 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+.+.+.|+++|+.+|+.||+++-+ .....|..+.++|||+|.+++..|+.... .....+|.|...++.++.+.+.
T Consensus 257 ~~~~~~i~~ir~~~p~~~Vi~g~v---~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~t--r~~~g~g~p~~~~i~~v~~~~~ 331 (496)
T 4fxs_A 257 EGVLQRIRETRAAYPHLEIIGGNV---ATAEGARALIEAGVSAVKVGIGPGSICTT--RIVTGVGVPQITAIADAAGVAN 331 (496)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEE---CSHHHHHHHHHHTCSEEEECSSCCTTBCH--HHHHCCCCCHHHHHHHHHHHHG
T ss_pred hHHHHHHHHHHHHCCCceEEEccc---CcHHHHHHHHHhCCCEEEECCCCCcCccc--ccccCCCccHHHHHHHHHHHhc
Confidence 567789999999998999999743 34456788999999999998765554332 2244678999999999988774
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCC-------
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAG------- 660 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g------- 660 (1429)
.. .++||++|||+++.|+++|+++||++|.+|+.++- +.+||..+...+....|.|-|
T Consensus 332 ~~----~iPVIa~GGI~~~~di~kala~GAd~V~iGs~f~~-----------t~Espg~~~~~~g~~~k~~~gm~s~~a~ 396 (496)
T 4fxs_A 332 EY----GIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAG-----------TEEAPGEVILYQGRSYKAYRGMGSLGAM 396 (496)
T ss_dssp GG----TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT-----------BTTSSSCCEESSSCEEEEEECTTSHHHH
T ss_pred cC----CCeEEEeCCCCCHHHHHHHHHcCCCeEEecHHHhc-----------CCCCCcceeeeCCeEeeeecccchHHHH
Confidence 43 48999999999999999999999999999996543 335666665444332222210
Q ss_pred ---------------------c-------HHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCccccc
Q psy12805 661 ---------------------K-------PEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKP 700 (1429)
Q Consensus 661 ---------------------~-------~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~ 700 (1429)
+ ...|.+++..+..+||..|..+|.++|.||..+..++..
T Consensus 397 ~~~~~~r~~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~l~~~~~~~~~ 464 (496)
T 4fxs_A 397 SKGSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTKAQFVRI 464 (496)
T ss_dssp HSSSCCSTTTC---CCCCCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHHCCEEEC
T ss_pred hccccccccccccccccccCCccEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhCCeEEEE
Confidence 0 135778899999999999999999999999666655544
No 110
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.17 E-value=6.7e-11 Score=140.11 Aligned_cols=173 Identities=18% Similarity=0.226 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+.+.+.|+.+|+.+ +.||+++.+ .....|..+.++|||+|++ |.++|+ .........+|.|...++.++.+.+.
T Consensus 170 ~~~~e~I~~ik~~~-~i~Vi~g~V---~t~e~A~~a~~aGAD~I~v-G~g~Gs-~~~tr~~~g~g~p~~~al~~v~~~~~ 243 (400)
T 3ffs_A 170 LNIIRTLKEIKSKM-NIDVIVGNV---VTEEATKELIENGADGIKV-GIGPGS-ICTTRIVAGVGVPQITAIEKCSSVAS 243 (400)
T ss_dssp HHHHHHHHHHHTTC-CCEEEEEEE---CSHHHHHHHHHTTCSEEEE-CC----------CCSCBCCCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHhcC-CCeEEEeec---CCHHHHHHHHHcCCCEEEE-eCCCCc-CcccccccccchhHHHHHHHHHHHHH
Confidence 66788899999887 789999844 3456788899999999999 433321 11111234578899999999887763
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCC-------
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAG------- 660 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g------- 660 (1429)
. .+++||++|||+++.|+++++++||++|.+||.++. +.+||..+..++....|.|-|
T Consensus 244 ~----~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~-----------t~Es~~~~~~~~g~~~k~y~Gm~s~~am 308 (400)
T 3ffs_A 244 K----FGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAG-----------TEESPGEKELIGDTVYKYYRGMGSVGAM 308 (400)
T ss_dssp T----TTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTT-----------BTTSSCCEEESSSSEEEC----------
T ss_pred h----cCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhc-----------CCCCCchhhhcCCeeeeeecCcchHHHH
Confidence 2 258999999999999999999999999999997654 346777777655433222211
Q ss_pred -----------c-------H----------HHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCcccccc
Q psy12805 661 -----------K-------P----------EHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDLLKPR 701 (1429)
Q Consensus 661 -----------~-------~----------e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdll~~~ 701 (1429)
+ + -.|.+++..+..+||.-|..+|.++|.||..+..++...
T Consensus 309 ~~~~~~ry~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~~~y~G~~~i~el~~~~~f~~~t 377 (400)
T 3ffs_A 309 KSGSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKKSSYVEIT 377 (400)
T ss_dssp -------------------------CEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHCCEEECC
T ss_pred hccccchhhcccccccccCCCCcEEecCCCCCHHHHHHHHHHHHHHhhhhcCcccHHHHHhCCeEEEEc
Confidence 0 1 136688899999999999999999999997766666543
No 111
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.14 E-value=5.4e-11 Score=151.30 Aligned_cols=182 Identities=14% Similarity=0.074 Sum_probs=125.8
Q ss_pred ceEEEccCCCC--------CcC---C----ccCccchHHHHhhccC-CCceEEEc--cccccccHHHHHHhCCCCccccc
Q psy12805 1210 GFIKYSRETAP--------YRP---A----EKRLKDWDEIYATQHV-RKGLRIQA--ARCMECGVPFCQSSHGCPLGNII 1271 (1429)
Q Consensus 1210 gf~kiAtGs~P--------~~p---~----~~rv~D~~el~~l~~~-pk~lvVIG--aGcIgcE~a~c~s~~Gc~V~~iL 1271 (1429)
.++.+|||+.| ..| . ...+.+..++++.... .++++|+| +|.++||++..+++.|++|..+-
T Consensus 481 d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~ 560 (729)
T 1o94_A 481 DKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVS 560 (729)
T ss_dssp SEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEe
Confidence 46889999873 333 1 2256777777765432 46999999 99999999999999999984332
Q ss_pred ccc-chh-hccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEe-C------------------CCeeEEE
Q psy12805 1272 PKW-NDL-IYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEV-P------------------NSEKIFK 1328 (1429)
Q Consensus 1272 p~~-d~l-vf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~-~------------------gse~~ie 1328 (1429)
+.- ... .+... ...+.+.|+++| +..+..+++++. ++ +..... . +++++++
T Consensus 561 ~~~l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~----~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 634 (729)
T 1o94_A 561 GVHLANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEP----GR-MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIE 634 (729)
T ss_dssp SSCTTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEET----TE-EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEE
T ss_pred ccccccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEEC----Ce-EEEEEecCCceEEecccccccccccCCcceeee
Confidence 221 000 01112 456777788888 556777777742 11 121111 1 2233599
Q ss_pred ecEEEEeccccCchhhhhhccCccccCCCCEEecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhCCC
Q psy12805 1329 CDLVLLAMGFLGPERYIANELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFLMGTS 1408 (1429)
Q Consensus 1329 aDlVLlAiG~~pp~~~Lle~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g~~ 1408 (1429)
||.||+|+|++ |+..|++.++. .+|+ +++|++|+|||+|||+. +.++..|+.||+.||.+|..+|.+..
T Consensus 635 aD~Vv~a~G~~-p~~~l~~~l~~--------~vd~-~~~t~~~~VyAiGD~~~-~~~~~~A~~~G~~aA~~i~~~l~~~~ 703 (729)
T 1o94_A 635 FDSLVLVTGRH-SECTLWNELKA--------RESE-WAENDIKGIYLIGDAEA-PRLIADATFTGHRVAREIEEANPQIA 703 (729)
T ss_dssp CSEEEEESCEE-ECCHHHHHHHH--------TGGG-TGGGTCCEEEECGGGTS-CCCHHHHHHHHHHHHHTTTSSCTTSC
T ss_pred CCEEEECCCCC-CChHHHHHHhh--------hccc-ccccCCCCeEEEeCccc-hhhHHHHHHHHHHHHHHhhhhcccCC
Confidence 99999999999 45567665432 1465 78999999999999986 67788999999999999998876543
No 112
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.13 E-value=1.7e-10 Score=136.77 Aligned_cols=178 Identities=15% Similarity=0.180 Sum_probs=120.3
Q ss_pred chHHHHhccCCCCc-----cccccCCC--CCCCCCHHHHHHHHHHHHHhC-------------------CCCe-EEEEec
Q psy12805 479 VTKDIASTRHSVPG-----VGLISPPP--HHDIYSIEDLAELIYDLKCAN-------------------PNAR-ISVKLV 531 (1429)
Q Consensus 479 V~~~iA~~r~~~pg-----~~LisP~~--h~di~siedL~qlI~~Lk~~~-------------------~~~p-V~VKLv 531 (1429)
+.+++..++.+.+. +++-+|.. -++..+.+.+.+++..+|+.. ..+| |.||+.
T Consensus 198 ~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~ 277 (415)
T 3i65_A 198 VDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLA 277 (415)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEec
Confidence 45555444444332 22334543 334567888999999998751 3689 999999
Q ss_pred cccC---hHHHHHHHHhcCCcEEEEecCCCCCCcccccc-cc----ccCCC-hHHHHHHHHHHHHhcCCCCceEEEEcCC
Q psy12805 532 SEVG---VGVVASGVAKGKAEHIVISGHDGGTGASSWTG-IK----NAGLP-WELGVAETHQVLALNNLRSRVVLQADGQ 602 (1429)
Q Consensus 532 ~e~G---vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~-~~----~~GiP-~~laL~ev~q~L~~~gLR~~V~LiasGG 602 (1429)
+... +..+|..+.++|+|.|+++++.... ..+.. .. ..|-| +..++..+.+.-.. +..+++||++||
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r--~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~--v~~~iPIIg~GG 353 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQI--NDIKSFENKKGGVSGAKLKDISTKFICEMYNY--TNKQIPIIASGG 353 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCC--CCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHH--TTTCSCEEECSS
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCccc--ccccccccccCCcCCccchHHHHHHHHHHHHH--hCCCCCEEEECC
Confidence 9765 5568888999999999999875320 00000 00 11222 23344444333222 234799999999
Q ss_pred cccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHh
Q psy12805 603 IRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAK 682 (1429)
Q Consensus 603 Irtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~ 682 (1429)
|+|+.|+.+++.+|||+|++||+++.- | | .+++.+.++|.++|.+
T Consensus 354 I~s~eDa~e~l~aGAd~VqIgra~l~~-G--------------------P--------------~~~~~i~~~L~~~l~~ 398 (415)
T 3i65_A 354 IFSGLDALEKIEAGASVCQLYSCLVFN-G--------------------M--------------KSAVQIKRELNHLLYQ 398 (415)
T ss_dssp CCSHHHHHHHHHHTEEEEEESHHHHHH-G--------------------G--------------GHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEEcHHHHhc-C--------------------H--------------HHHHHHHHHHHHHHHH
Confidence 999999999999999999999977652 1 1 2578899999999999
Q ss_pred cCCCChhhhcCCC
Q psy12805 683 LGIRKFADLVGRT 695 (1429)
Q Consensus 683 mGi~sl~ElvGrs 695 (1429)
.|+++++|++|..
T Consensus 399 ~G~~si~e~~G~~ 411 (415)
T 3i65_A 399 RGYYNLKEAIGRK 411 (415)
T ss_dssp TTCSSSTTTTTTT
T ss_pred cCCCCHHHHhChh
Confidence 9999999999864
No 113
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.12 E-value=2.5e-10 Score=149.37 Aligned_cols=178 Identities=12% Similarity=0.039 Sum_probs=122.9
Q ss_pred ceEEEccCCCCCcCC-----ccCccchHHHH---hh-ccCC-CceEEEccccccccHHHHHHhCCCCccccccccchhhc
Q psy12805 1210 GFIKYSRETAPYRPA-----EKRLKDWDEIY---AT-QHVR-KGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIY 1279 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~-----~~rv~D~~el~---~l-~~~p-k~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf 1279 (1429)
.++.+|||+.|..|+ ...+.+..++. +. ...| ++++|+|+|.+++|++..+...|++|..+-+. .. +.
T Consensus 243 d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~-~~-~~ 320 (965)
T 2gag_A 243 KQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDAR-SS-IS 320 (965)
T ss_dssp EEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESC-SS-CC
T ss_pred CEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECC-Cc-cc
Confidence 358899999887652 23355554433 21 2234 79999999999999999999999987433221 11 00
Q ss_pred cchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeC--------CCeeEEEecEEEEeccccCchhhhhhcc
Q psy12805 1280 HNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVP--------NSEKIFKCDLVLLAMGFLGPERYIANEL 1349 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~--------gse~~ieaDlVLlAiG~~pp~~~Lle~l 1349 (1429)
.. .+.+++.| +..+..+.+++.. +++++..+.+. |+.++++||.|++|+|++ |+..+++..
T Consensus 321 -~~-----~~~l~~~GV~v~~~~~v~~i~~~--~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~-P~~~l~~~~ 391 (965)
T 2gag_A 321 -AA-----AAQAVADGVQVISGSVVVDTEAD--ENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFN-PVVHLHSQR 391 (965)
T ss_dssp -HH-----HHHHHHTTCCEEETEEEEEEEEC--TTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEE-ECCHHHHHT
T ss_pred -hh-----HHHHHhCCeEEEeCCEeEEEecc--CCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcC-cChHHHHhC
Confidence 01 45567777 4457777777541 12332222221 334689999999999999 555666553
Q ss_pred CccccCCCCEEecCCCCc-----cCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhC
Q psy12805 1350 DLTLDPRSNYSTVEKTYL-----TTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFLMG 1406 (1429)
Q Consensus 1350 GLeld~~G~I~VD~~~~~-----TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g 1406 (1429)
+|.|.+|+ .++ ||+|+|||+|||+..+.+ ..|+.||+.||.+|..+|..
T Consensus 392 ------~g~i~vd~-~~~~~v~~ts~p~IyAaGD~a~~~~l-~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 392 ------QGKLDWDT-TIHAFVPADAVANQHLAGAMTGRLDT-ASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp ------TCCEEEET-TTTEEEECSCCTTEEECGGGGTCCSH-HHHHHHHHHHHHHHHHHTTC
T ss_pred ------CCcEEEcC-cccccccCCCCCCEEEEEecCCchhH-HHHHHHHHHHHHHHHHHcCC
Confidence 35688887 555 899999999999987665 48999999999999999864
No 114
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.11 E-value=1e-10 Score=142.19 Aligned_cols=176 Identities=19% Similarity=0.210 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHh
Q psy12805 509 DLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLAL 588 (1429)
Q Consensus 509 dL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~ 588 (1429)
.+.+.|..|+..+ .+||++| +++....+..+. |+|.|.+ |.++|. .........||.|+..++.++.+.+..
T Consensus 255 ~~L~~I~~l~~~~-~vpvi~k---~v~~~~~a~~l~--G~d~v~v-g~g~g~-~~~~r~~~~~g~~~~~~l~~~~~~~~~ 326 (486)
T 2cu0_A 255 KAIKSMKEMRQKV-DADFIVG---NIANPKAVDDLT--FADAVKV-GIGPGS-ICTTRIVAGVGVPQITAVAMVADRAQE 326 (486)
T ss_dssp HHHHHHHHHHHTC-CSEEEEE---EECCHHHHTTCT--TSSEEEE-CSSCST-TBCHHHHTCCCCCHHHHHHHHHHHHHH
T ss_pred ehhhHHHHHHHHh-CCccccC---CcCCHHHHHHhh--CCCeEEE-eeeecc-ceeeeEEeecCcchHHHHHHHHHHHHH
Confidence 4556678888887 8999999 445444454444 9999999 665543 322223457899999999999887755
Q ss_pred cCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccc--------cccccccCCCCccceec---CHHH---
Q psy12805 589 NNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCT--------MMRKCHLNTCPVGIATQ---DPEL--- 654 (1429)
Q Consensus 589 ~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~--------~~r~c~~~~cP~giatq---d~~l--- 654 (1429)
. +++||++|||+++.|++||++|||++|++|+.++.+..|. .+-|||-+-|..+-... +...
T Consensus 327 ~----~vpVia~GGi~~~~di~kalalGA~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~r~~~g~ 402 (486)
T 2cu0_A 327 Y----GLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGG 402 (486)
T ss_dssp H----TCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------
T ss_pred c----CCcEEecCCCCCHHHHHHHHHcCCCceeeChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhccccccccccc
Confidence 4 4899999999999999999999999999999877644332 22235555554442211 0000
Q ss_pred ---Hhhc-CCcHH-------HHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCc
Q psy12805 655 ---RKKF-AGKPE-------HVINYLFMLAEEVRTHMAKLGIRKFADLVGRTD 696 (1429)
Q Consensus 655 ---r~~~-~g~~e-------~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsd 696 (1429)
+.+| ..+.+ .+..++..+..+||..|..+|.+++.||-....
T Consensus 403 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~lr~~m~~~G~~~~~~l~~~~~ 455 (486)
T 2cu0_A 403 YMKTRKFVPEGVEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEKGE 455 (486)
T ss_dssp CCCCSCSSCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHCC
T ss_pred ccccccccccceEEeecccCCHHHHHHHHHHHHHHhcccCCcCCHHHHHhhCC
Confidence 0111 11111 288999999999999999999999999844333
No 115
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.08 E-value=6.7e-10 Score=127.30 Aligned_cols=151 Identities=19% Similarity=0.189 Sum_probs=109.3
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccCh---HHHHHHHHhcCCcEEEEecCCCCCCcc-------cccc--cc---c
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVGV---GVVASGVAKGKAEHIVISGHDGGTGAS-------SWTG--IK---N 570 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gv---g~vA~~~akaGaD~I~IsG~~GGTgaa-------p~~~--~~---~ 570 (1429)
+++.+.++++.+|+.. +.||.||+.+.... ..+|..+.++|+|.|+++++.+ .+.. +... .. .
T Consensus 142 ~~e~~~~iv~~vr~~~-~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~-~g~~i~~~~~~~~~~~~~~~gG~ 219 (311)
T 1jub_A 142 DFEATEKLLKEVFTFF-TKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIG-NGLFIDPEAESVVIKPKDGFGGI 219 (311)
T ss_dssp CHHHHHHHHHHHTTTC-CSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEE-EEECEETTTTEESCSGGGGEEEE
T ss_pred CHHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCC-cCceeccCCCCcccccCCCCCcc
Confidence 8889999999999886 79999999876543 3357778899999999988632 0100 0000 00 0
Q ss_pred cCCCh-HHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCcccee
Q psy12805 571 AGLPW-ELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIAT 649 (1429)
Q Consensus 571 ~GiP~-~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giat 649 (1429)
.|.+. ..++..+.+. ...+..+++|+++|||+|+.|+.+++.+|||+|++||+++. -
T Consensus 220 sg~~~~~~~~~~i~~v--~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~-~------------------- 277 (311)
T 1jub_A 220 GGAYIKPTALANVRAF--YTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHK-E------------------- 277 (311)
T ss_dssp ESGGGHHHHHHHHHHH--HTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH-H-------------------
T ss_pred ccccccHHHHHHHHHH--HHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHh-c-------------------
Confidence 13221 1233333322 22234479999999999999999999999999999997664 1
Q ss_pred cCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCC
Q psy12805 650 QDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRT 695 (1429)
Q Consensus 650 qd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrs 695 (1429)
+| .+++.+.++++.+|.+.|+++++|++|..
T Consensus 278 -~p--------------~~~~~i~~~l~~~l~~~g~~si~e~~g~~ 308 (311)
T 1jub_A 278 -GP--------------AIFDRIIKELEEIMNQKGYQSIADFHGKL 308 (311)
T ss_dssp -CT--------------HHHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred -Cc--------------HHHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 22 35888999999999999999999999865
No 116
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.08 E-value=5.6e-10 Score=131.21 Aligned_cols=156 Identities=17% Similarity=0.223 Sum_probs=111.3
Q ss_pred CCCCHHHHHHHHHHHHHh------CCCCeEEEEeccccC---hHHHHHHHHhcCCcEEEEecCCCC-CCc-ccccccc--
Q psy12805 503 DIYSIEDLAELIYDLKCA------NPNARISVKLVSEVG---VGVVASGVAKGKAEHIVISGHDGG-TGA-SSWTGIK-- 569 (1429)
Q Consensus 503 di~siedL~qlI~~Lk~~------~~~~pV~VKLv~e~G---vg~vA~~~akaGaD~I~IsG~~GG-Tga-ap~~~~~-- 569 (1429)
...+.+.+.+++..+++. ..++||.||+.+... +..+|..+.++|+|.|+++++.-+ ... .+.....
T Consensus 194 ~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~g 273 (367)
T 3zwt_A 194 SLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETG 273 (367)
T ss_dssp GGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSS
T ss_pred ccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccC
Confidence 456788899999999864 136899999998764 445788889999999999977421 000 0000000
Q ss_pred -ccCCC-hHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccc
Q psy12805 570 -NAGLP-WELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGI 647 (1429)
Q Consensus 570 -~~GiP-~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~gi 647 (1429)
..|.| +..++..+.+.-.. +..+++||++|||+|+.|+.+++.+|||+|++||+++..
T Consensus 274 GlSG~~i~p~a~~~v~~i~~~--v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~------------------ 333 (367)
T 3zwt_A 274 GLSGKPLRDLSTQTIREMYAL--TQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFW------------------ 333 (367)
T ss_dssp EEEEGGGHHHHHHHHHHHHHH--TTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHH------------------
T ss_pred CcCCcccchhHHHHHHHHHHH--cCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhc------------------
Confidence 11222 12344444332222 234699999999999999999999999999999977651
Q ss_pred eecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCC
Q psy12805 648 ATQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRT 695 (1429)
Q Consensus 648 atqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrs 695 (1429)
+| .++..+.++|..+|.+.|+++++|++|..
T Consensus 334 ---gP--------------~~~~~i~~~l~~~m~~~G~~~i~e~~G~~ 364 (367)
T 3zwt_A 334 ---GP--------------PVVGKVKRELEALLKEQGFGGVTDAIGAD 364 (367)
T ss_dssp ---CT--------------HHHHHHHHHHHHHHHHTTCSSHHHHTTGG
T ss_pred ---Cc--------------HHHHHHHHHHHHHHHHcCCCCHHHhhCcc
Confidence 22 35888999999999999999999999854
No 117
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.07 E-value=8.9e-10 Score=132.80 Aligned_cols=166 Identities=17% Similarity=0.169 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+...+.|+.+|+.+|+++|++-- +.....|..+.++|||.|.+.=..|..+... ...-.|.|.+.|+.++.++..
T Consensus 307 ~~v~~~i~~ik~~~p~~~viaGN---VaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr--~v~GvG~PQ~tAi~~~a~~a~ 381 (556)
T 4af0_A 307 VYQIEFIKWIKQTYPKIDVIAGN---VVTREQAAQLIAAGADGLRIGMGSGSICITQ--EVMAVGRPQGTAVYAVAEFAS 381 (556)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEE---ECSHHHHHHHHHHTCSEEEECSSCSTTBCCT--TTCCSCCCHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHhhCCcceEEecc---ccCHHHHHHHHHcCCCEEeecCCCCcccccc--cccCCCCcHHHHHHHHHHHHH
Confidence 45678899999999999999984 4456677889999999999754434332222 234678999999999998876
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCC--c----
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAG--K---- 661 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g--~---- 661 (1429)
..+ ++||+||||+++.|++||+++|||+|.+|. |+| | +.++|-.+...+....|.|-| .
T Consensus 382 ~~~----vpvIADGGI~~sGDi~KAlaaGAd~VMlGs--llA-G--------t~EsPGe~~~~~G~~~K~YrGMgS~~Am 446 (556)
T 4af0_A 382 RFG----IPCIADGGIGNIGHIAKALALGASAVMMGG--LLA-G--------TTESPGEYFYHEGKRVKVYRGMGSIEAM 446 (556)
T ss_dssp GGT----CCEEEESCCCSHHHHHHHHHTTCSEEEEST--TTT-T--------BTTSSSCCEEETTEEEEEEECTTSHHHH
T ss_pred HcC----CCEEecCCcCcchHHHHHhhcCCCEEEEch--hhc-c--------ccCCCCcEEEECCEEEEeecccccHHHH
Confidence 654 899999999999999999999999999988 332 2 345666655544322221110 0
Q ss_pred --------------------------------------------HHHHHHHHHHHHHHHHHHHHhcCCCChhhhcC
Q psy12805 662 --------------------------------------------PEHVINYLFMLAEEVRTHMAKLGIRKFADLVG 693 (1429)
Q Consensus 662 --------------------------------------------~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvG 693 (1429)
.-.|.+++..+..+||.-|..+|.++|.||.-
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~s~dRyfq~~~~~~v~EGveg~VpykG~v~~~i~~l~gGlrs~m~y~Ga~~i~el~~ 522 (556)
T 4af0_A 447 EHTQRGSASGKRSILGLDNAATARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSLQDAAIKSVSELHS 522 (556)
T ss_dssp TTC------------CCSCSSEEECCCBSSSSCBCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHH
T ss_pred HhcccCCcccccccccccccchhhhcccccccccCCccEEeccCCCcHHHHHHHHHHHHHHhhhccCCCcHHHHHH
Confidence 01377899999999999999999999999843
No 118
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.07 E-value=2.5e-10 Score=138.75 Aligned_cols=177 Identities=15% Similarity=0.170 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+.+.+.+..+++.+|..||+++ .+.....+..+.++|+|.|.++ .++|+.. .......++.|...++.++.+...
T Consensus 259 ~~~~~~i~~l~~~~p~~pvi~G---~v~t~~~a~~~~~~Gad~I~vg-~g~g~~~-~tr~~~~~~~p~~~~l~~~~~~~~ 333 (491)
T 1zfj_A 259 AGVLRKIAEIRAHFPNRTLIAG---NIATAEGARALYDAGVDVVKVG-IGPGSIC-TTRVVAGVGVPQVTAIYDAAAVAR 333 (491)
T ss_dssp HHHHHHHHHHHHHCSSSCEEEE---EECSHHHHHHHHHTTCSEEEEC-SSCCTTB-CHHHHTCCCCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCcEeCC---CccCHHHHHHHHHcCCCEEEEC-ccCCcce-EEeeecCCCCCcHHHHHHHHHHHh
Confidence 4567788999998888999977 4455567788899999999994 4333211 112345679999999998887654
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHh---ccccccccccCCCCccceecC-------------
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITM---GCTMMRKCHLNTCPVGIATQD------------- 651 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~al---gc~~~r~c~~~~cP~giatqd------------- 651 (1429)
.. +++||++|||+++.|++||+++||++|++|++++... ++...+.+...++-.|.+...
T Consensus 334 ~~----~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~~~~~g 409 (491)
T 1zfj_A 334 EY----GKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQG 409 (491)
T ss_dssp HT----TCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC---------
T ss_pred hc----CCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhCCCcCcceEEEECCEEEEEEecccCHHHHhcccccccccc
Confidence 33 5899999999999999999999999999999876532 222111111112222222211
Q ss_pred -HHHHhhc-CCc-------HHHHHHHHHHHHHHHHHHHHhcCCCChhhhcC
Q psy12805 652 -PELRKKF-AGK-------PEHVINYLFMLAEEVRTHMAKLGIRKFADLVG 693 (1429)
Q Consensus 652 -~~lr~~~-~g~-------~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvG 693 (1429)
+.++.++ ..+ ...+.++++.+..||+..|..+|.+++.||-.
T Consensus 410 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~~~~G~~~~~~l~~ 460 (491)
T 1zfj_A 410 SVNEANKLVPEGIEGRVAYKGAASDIVFQMLGGIRSGMGYVGAGDIQELHE 460 (491)
T ss_dssp -----CCCCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHH
T ss_pred ccccccccCcCcceEecCcCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHh
Confidence 0111111 111 12388999999999999999999999999843
No 119
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.07 E-value=2.1e-10 Score=139.40 Aligned_cols=153 Identities=13% Similarity=-0.012 Sum_probs=110.7
Q ss_pred ceEEEccCCCCCcCC-----ccCccchHHHHhhc-----cCCCceEEEccccccccHHHHHHhCCCCccccccccchhhc
Q psy12805 1210 GFIKYSRETAPYRPA-----EKRLKDWDEIYATQ-----HVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIY 1279 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~-----~~rv~D~~el~~l~-----~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf 1279 (1429)
.++.+|||+.|..|+ ...+.+.+++..+. ...++++|+|+|.++++
T Consensus 209 d~lvlAtGa~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle------------------------ 264 (493)
T 1y56_A 209 KRVVLATGAIDSTMLFENNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI------------------------ 264 (493)
T ss_dssp SCEEECCCEEECCCCCTTTTSTTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH------------------------
T ss_pred CEEEECCCCCccCCCCCCCCCCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH------------------------
Confidence 448899999887663 22344555544332 23489999999999766
Q ss_pred cchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhccCccc--cC
Q psy12805 1280 HNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANELDLTL--DP 1355 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLel--d~ 1355 (1429)
+.++++| +.++..+.+++. ++.+..+...+ .++++||.|++|+|++ |+..|++.+|+++ ++
T Consensus 265 ---------~~l~~~GV~v~~~~~v~~i~~----~~~v~~v~~~~-g~~i~aD~Vv~a~G~~-p~~~l~~~~g~~~~~~~ 329 (493)
T 1y56_A 265 ---------QELERWGIDYVHIPNVKRVEG----NEKVERVIDMN-NHEYKVDALIFADGRR-PDINPITQAGGKLRFRR 329 (493)
T ss_dssp ---------HHHHHHTCEEEECSSEEEEEC----SSSCCEEEETT-CCEEECSEEEECCCEE-ECCHHHHHTTCCEEEET
T ss_pred ---------HHHHhCCcEEEeCCeeEEEec----CCceEEEEeCC-CeEEEeCEEEECCCcC-cCchHHHhcCCCccccC
Confidence 2334455 455677777753 22222223333 3579999999999999 5667888888876 57
Q ss_pred CCCEE-ecCCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q psy12805 1356 RSNYS-TVEKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFL 1404 (1429)
Q Consensus 1356 ~G~I~-VD~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L 1404 (1429)
+|+|. ||+ +++ |.|+|||+|||+.. .++..|+.||+.||.+|..++
T Consensus 330 ~g~i~~vd~-~~~-s~~~vya~GD~~~~-~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 330 GYYSPVLDE-YHR-IKDGIYVAGSAVSI-KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp TEEEECCCT-TSE-EETTEEECSTTTCC-CCHHHHHHHHHHHHHHHHHHT
T ss_pred Cceeecccc-ccC-cCCCEEEEeccCCc-cCHHHHHHHHHHHHHHHHHHc
Confidence 88887 676 788 99999999999864 578999999999999999887
No 120
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.05 E-value=1e-09 Score=127.92 Aligned_cols=157 Identities=17% Similarity=0.202 Sum_probs=111.2
Q ss_pred CCC-CCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCc-------cccc--ccc--
Q psy12805 502 HDI-YSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGA-------SSWT--GIK-- 569 (1429)
Q Consensus 502 ~di-~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTga-------ap~~--~~~-- 569 (1429)
.++ +++|.+.+++..+|+.. ++||.||+.+......++..+.++|++.|++-+.--++|. .+.. ...
T Consensus 172 ~~l~~~~e~l~~il~av~~~~-~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~g 250 (345)
T 3oix_A 172 PQIAYDFETTDQILSEVFTYF-TKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFG 250 (345)
T ss_dssp CCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEE
T ss_pred hhhcCCHHHHHHHHHHHHHHh-CCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccC
Confidence 344 58899999999999987 7999999999877888888888888875543221100000 0100 000
Q ss_pred -ccCCCh-HHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccc
Q psy12805 570 -NAGLPW-ELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGI 647 (1429)
Q Consensus 570 -~~GiP~-~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~gi 647 (1429)
.-|-|. .+++..+.+. ...+..+++||++|||+|+.|+.+++.+|||+|++||++++.
T Consensus 251 GlSG~ai~p~a~~~v~~i--~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~------------------ 310 (345)
T 3oix_A 251 GIGGDYVKPTALANVHAF--YKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQE------------------ 310 (345)
T ss_dssp EEEEGGGHHHHHHHHHHH--HTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHH------------------
T ss_pred CcCCccccHHHHHHHHHH--HHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhc------------------
Confidence 112222 2344444432 222444799999999999999999999999999999975541
Q ss_pred eecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCc
Q psy12805 648 ATQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTD 696 (1429)
Q Consensus 648 atqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsd 696 (1429)
+| .+++.+.++|+.+|.+.|+++++|++|...
T Consensus 311 ---gP--------------~~~~~i~~~L~~~l~~~G~~si~e~~G~~~ 342 (345)
T 3oix_A 311 ---GP--------------QIFKRITKELXAIMTEKGYETLEDFRGKLN 342 (345)
T ss_dssp ---CT--------------HHHHHHHHHHHHHHHHHTCCSGGGTTTCCB
T ss_pred ---Ch--------------HHHHHHHHHHHHHHHHcCCCCHHHHHhHHh
Confidence 22 358889999999999999999999999754
No 121
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.04 E-value=6.3e-10 Score=133.45 Aligned_cols=177 Identities=15% Similarity=0.164 Sum_probs=121.0
Q ss_pred chHHHHhccCCCCccc-----cccCCC--CCCCCCHHHHHHHHHHHHHhC------------------------------
Q psy12805 479 VTKDIASTRHSVPGVG-----LISPPP--HHDIYSIEDLAELIYDLKCAN------------------------------ 521 (1429)
Q Consensus 479 V~~~iA~~r~~~pg~~-----LisP~~--h~di~siedL~qlI~~Lk~~~------------------------------ 521 (1429)
+.+....++.+.++.+ +-||.. .++..+.+.+.+++..+|+..
T Consensus 196 ~~dy~~~a~~l~~~aD~ieiNiscPnt~Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~ 275 (443)
T 1tv5_A 196 VDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNK 275 (443)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC--------------------------
T ss_pred HHHHHHHHHHHhcCCCEEEEeccCCCCcccccccCHHHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccc
Confidence 4455544554443322 236653 345667888999999988641
Q ss_pred -------------------CCCe-EEEEeccccC---hHHHHHHHHhcCCcEEEEecCCCCCCccccc-cc-cc----cC
Q psy12805 522 -------------------PNAR-ISVKLVSEVG---VGVVASGVAKGKAEHIVISGHDGGTGASSWT-GI-KN----AG 572 (1429)
Q Consensus 522 -------------------~~~p-V~VKLv~e~G---vg~vA~~~akaGaD~I~IsG~~GGTgaap~~-~~-~~----~G 572 (1429)
.+.| |.||+.+... +..+|..+.++|+|.|+++++... .... .. .. .|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~---~~d~~~~~~~~GGlSG 352 (443)
T 1tv5_A 276 NNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQ---INDIKSFENKKGGVSG 352 (443)
T ss_dssp ------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSC---CCCCGGGTTCCSEEEE
T ss_pred cchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcc---cccccccccccCCcCC
Confidence 3578 9999998754 445788899999999999987431 1000 00 01 12
Q ss_pred CC-hHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecC
Q psy12805 573 LP-WELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQD 651 (1429)
Q Consensus 573 iP-~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd 651 (1429)
.| +..++..+.+.-.. +..+++||++|||+|+.|+.+++.+|||+|+++|+++.. +
T Consensus 353 ~~~~~~sl~~i~~v~~~--v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~---------------------g 409 (443)
T 1tv5_A 353 AKLKDISTKFICEMYNY--TNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFN---------------------G 409 (443)
T ss_dssp HHHHHHHHHHHHHHHHH--TTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHH---------------------G
T ss_pred CcchHHHHHHHHHHHHH--cCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc---------------------C
Confidence 12 22233333332222 234799999999999999999999999999999977651 2
Q ss_pred HHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCC
Q psy12805 652 PELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRT 695 (1429)
Q Consensus 652 ~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrs 695 (1429)
| .+++.+.+++.++|.+.|+++++|++|..
T Consensus 410 P--------------~l~~~i~~~l~~~l~~~G~~si~e~~G~~ 439 (443)
T 1tv5_A 410 M--------------KSAVQIKRELNHLLYQRGYYNLKEAIGRK 439 (443)
T ss_dssp G--------------GHHHHHHHHHHHHHHHHTCSSSGGGTTTT
T ss_pred h--------------HHHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 2 25788889999999999999999999864
No 122
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.01 E-value=1.5e-09 Score=124.70 Aligned_cols=151 Identities=17% Similarity=0.182 Sum_probs=108.2
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccC---hHHHHHHHHhcC-CcEEEEecCCCC-------CCcccccc--ccc--
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVG---VGVVASGVAKGK-AEHIVISGHDGG-------TGASSWTG--IKN-- 570 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~G---vg~vA~~~akaG-aD~I~IsG~~GG-------Tgaap~~~--~~~-- 570 (1429)
+++.+.++|+.+|+.. +.||+||+.+... +..+|..+.++| +|+|+++++.+. ++ .+... ...
T Consensus 144 ~~~~~~~ii~~vr~~~-~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~-~~~~~~~~~~gG 221 (314)
T 2e6f_A 144 DFEAMRTYLQQVSLAY-GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESE-SVVIKPKQGFGG 221 (314)
T ss_dssp SHHHHHHHHHHHHHHH-CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTT-EESCCGGGGEEE
T ss_pred CHHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCC-CcccccCcCCCc
Confidence 8889999999999886 6899999987654 333577788999 999999986421 00 00000 001
Q ss_pred -cCCCh-HHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccce
Q psy12805 571 -AGLPW-ELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIA 648 (1429)
Q Consensus 571 -~GiP~-~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~gia 648 (1429)
.|.+. ..++..+.+. .+. + .+++|+++|||+|+.|+.+++.+|||+|++||+++. -
T Consensus 222 ~sg~~~~p~~~~~i~~v-~~~-~-~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~-~------------------ 279 (314)
T 2e6f_A 222 LGGKYILPTALANVNAF-YRR-C-PDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQE-E------------------ 279 (314)
T ss_dssp EESGGGHHHHHHHHHHH-HHH-C-TTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHH-H------------------
T ss_pred cCcccccHHHHHHHHHH-HHh-c-CCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHh-c------------------
Confidence 12111 1223333222 111 2 369999999999999999999999999999997664 1
Q ss_pred ecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCc
Q psy12805 649 TQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTD 696 (1429)
Q Consensus 649 tqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsd 696 (1429)
+| .+++.+.++++.+|.+.|+++++|++|...
T Consensus 280 --~p--------------~~~~~i~~~l~~~~~~~g~~~i~~~~g~~~ 311 (314)
T 2e6f_A 280 --GP--------------GIFTRLEDELLEIMARKGYRTLEEFRGRVK 311 (314)
T ss_dssp --CT--------------THHHHHHHHHHHHHHHHTCCSSTTTTTCCB
T ss_pred --Cc--------------HHHHHHHHHHHHHHHHcCCCCHHHHhchHh
Confidence 22 358889999999999999999999998653
No 123
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=98.98 E-value=1.9e-09 Score=126.01 Aligned_cols=157 Identities=16% Similarity=0.150 Sum_probs=110.9
Q ss_pred CCC-CCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHH---HHHHhcC-CcEEEEecCCCC-----C-Cccccc--cc
Q psy12805 502 HDI-YSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVA---SGVAKGK-AEHIVISGHDGG-----T-GASSWT--GI 568 (1429)
Q Consensus 502 ~di-~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA---~~~akaG-aD~I~IsG~~GG-----T-gaap~~--~~ 568 (1429)
.++ +++|.+.+++..+|+.. ++||.||+.+......++ ..+.++| +|.|++++.-|. . ...+.. ..
T Consensus 172 ~~l~~~~e~~~~il~av~~~~-~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~ 250 (354)
T 4ef8_A 172 PQVAYDFDAMRQCLTAVSEVY-PHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQ 250 (354)
T ss_dssp CCGGGSHHHHHHHHHHHHHHC-CSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGG
T ss_pred hhhccCHHHHHHHHHHHHHhh-CCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCcccccccc
Confidence 344 47899999999999987 799999999977654443 3345887 999998664210 0 000000 00
Q ss_pred c---ccCCCh-HHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCC
Q psy12805 569 K---NAGLPW-ELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCP 644 (1429)
Q Consensus 569 ~---~~GiP~-~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP 644 (1429)
. .-|-|. ..++..+.+.... ..+++||++|||+|+.|+.+++.+|||+|++||+++.- |
T Consensus 251 ~~gGlSG~~i~p~a~~~i~~v~~~---~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~-G------------- 313 (354)
T 4ef8_A 251 GFGGLGGRYVLPTALANINAFYRR---CPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEE-G------------- 313 (354)
T ss_dssp GEEEEEGGGGHHHHHHHHHHHHHH---CTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHH-C-------------
T ss_pred ccCCCCCCCCchHHHHHHHHHHHh---CCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHh-C-------------
Confidence 0 112222 2444444443222 13699999999999999999999999999999977651 1
Q ss_pred ccceecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCcc
Q psy12805 645 VGIATQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDL 697 (1429)
Q Consensus 645 ~giatqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdl 697 (1429)
| .+++.+.++|+.+|.+.|+++++|++|....
T Consensus 314 -------P--------------~~~~~i~~~l~~~m~~~G~~si~el~G~~~~ 345 (354)
T 4ef8_A 314 -------P--------------SIFERLTSELLGVMAKKRYQTLDEFRGKVRT 345 (354)
T ss_dssp -------T--------------THHHHHHHHHHHHHHHHTCCSGGGTTTCCBC
T ss_pred -------H--------------HHHHHHHHHHHHHHHHcCCCCHHHHHHHHhc
Confidence 1 2588899999999999999999999997543
No 124
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.95 E-value=1.8e-09 Score=128.98 Aligned_cols=193 Identities=13% Similarity=0.098 Sum_probs=115.8
Q ss_pred ceEEEccCCCCCcCCc------c-CccchHHHHh-hcc------CCCceEEEccccccccHHHHHHhC--CCCc------
Q psy12805 1210 GFIKYSRETAPYRPAE------K-RLKDWDEIYA-TQH------VRKGLRIQAARCMECGVPFCQSSH--GCPL------ 1267 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~------~-rv~D~~el~~-l~~------~pk~lvVIGaGcIgcE~a~c~s~~--Gc~V------ 1267 (1429)
.++.+|||+.|..|.. . ++....+..+ ... .+++++|||+|.+++|++..+... |++|
T Consensus 182 d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~ 261 (463)
T 3s5w_A 182 RALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRA 261 (463)
T ss_dssp SEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSS
T ss_pred CEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeC
Confidence 4588999999988741 1 2222222222 222 478999999999999999998887 7777
Q ss_pred cccccccch----hhccc-----------hHHHHHHHHH-------------------------Hh-CC--CCCCcEEEE
Q psy12805 1268 GNIIPKWND----LIYHN-----------NWSEALNQLL-------------------------QT-NN--FPAGIKTVK 1304 (1429)
Q Consensus 1268 ~~iLp~~d~----lvf~~-----------e~~~al~~~L-------------------------e~-~G--~~~gv~v~~ 1304 (1429)
..++|..+. ..|.. +....+.+.+ .. .+ +..+.+++.
T Consensus 262 ~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~ 341 (463)
T 3s5w_A 262 SALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVER 341 (463)
T ss_dssp SSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEE
T ss_pred CCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEE
Confidence 333332100 01111 1111111111 11 34 556778888
Q ss_pred EEEeecCCCceEEEEe---CCCeeEEEecEEEEeccccCc-hhhhhhccCccccCCCCEEecCCCCccC-----CCCEEE
Q psy12805 1305 VEWTKDATGRWKMDEV---PNSEKIFKCDLVLLAMGFLGP-ERYIANELDLTLDPRSNYSTVEKTYLTT-----VPRVYA 1375 (1429)
Q Consensus 1305 Ve~~k~~~G~~~~v~~---~gse~~ieaDlVLlAiG~~pp-~~~Lle~lGLeld~~G~I~VD~~~~~TS-----vPgVFA 1375 (1429)
++.. ++.+..... +|+.++++||.||+|+|++|+ ...+++.+...+ |.+.||. .++++ .|+|||
T Consensus 342 v~~~---~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~---g~i~v~~-~~~~~~~~~~~~~Ifa 414 (463)
T 3s5w_A 342 ATAT---AQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL---GDHEIGR-DYRLQTDERCKVAIYA 414 (463)
T ss_dssp EEEE---TTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB---C--CCCT-TSBCCBCTTBCSEEEE
T ss_pred EEec---CCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh---CCcccCc-ccccccCCCCCCeEEE
Confidence 8653 334443333 566667999999999999955 145666655443 6788987 66664 567999
Q ss_pred eCCCCC-----CCCcHHHHHHHHHHHHHHHHHHHhCCCC
Q psy12805 1376 AGDCRR-----GQSLVVWAISEGRQAAREIDSFLMGTST 1409 (1429)
Q Consensus 1376 AGD~a~-----g~~lvv~Ai~qGr~AA~nI~~~L~g~~~ 1409 (1429)
+|||.. .+.+...|.+++++++....+...+.+.
T Consensus 415 ~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~~~~~~~~~ 453 (463)
T 3s5w_A 415 QGFSQASHGLSDTLLSVLPVRAEEISGSLYQHLKPGTAA 453 (463)
T ss_dssp SSCCHHHHCTTTTSSTTHHHHHHHHHHHHHHHHC-----
T ss_pred cCCCcccCCcCccchhHHHHHHHHHHHHHHhhcCCchhH
Confidence 999963 3567778999999887766666544443
No 125
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.95 E-value=4.5e-09 Score=138.45 Aligned_cols=154 Identities=13% Similarity=0.064 Sum_probs=110.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecccc-ChHHHHHHHHhcCCcEEEEecCCCC--------CCccccc------ccc
Q psy12805 505 YSIEDLAELIYDLKCANPNARISVKLVSEV-GVGVVASGVAKGKAEHIVISGHDGG--------TGASSWT------GIK 569 (1429)
Q Consensus 505 ~siedL~qlI~~Lk~~~~~~pV~VKLv~e~-Gvg~vA~~~akaGaD~I~IsG~~GG--------Tgaap~~------~~~ 569 (1429)
.+++.+.++|+.+|+.. ++||+||+.+.. .+..+|..+.++|+|.|++++...+ +++..+. ...
T Consensus 686 ~~~~~~~~iv~~v~~~~-~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg 764 (1025)
T 1gte_A 686 QDPELVRNICRWVRQAV-QIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGG 764 (1025)
T ss_dssp GCHHHHHHHHHHHHHHC-SSCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEE
T ss_pred cCHHHHHHHHHHHHHhh-CCceEEEeCCChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCC
Confidence 46788999999999987 799999998865 4667888899999999999653111 1111000 001
Q ss_pred ccCCC-hHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccce
Q psy12805 570 NAGLP-WELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIA 648 (1429)
Q Consensus 570 ~~GiP-~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~gia 648 (1429)
..|.+ |..++..+.+..... .+++||++|||+|+.|+.+++++||++|++|++++. .
T Consensus 765 ~sg~~~~~~~~~~v~~v~~~~---~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~-~------------------ 822 (1025)
T 1gte_A 765 VSGTAIRPIALRAVTTIARAL---PGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQN-Q------------------ 822 (1025)
T ss_dssp EESGGGHHHHHHHHHHHHHHS---TTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT-S------------------
T ss_pred CCcccchhHHHHHHHHHHHHc---CCCCEEEecCcCCHHHHHHHHHcCCCEEEEeecccc-C------------------
Confidence 11222 233333333322222 258999999999999999999999999999997664 0
Q ss_pred ecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCcc
Q psy12805 649 TQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTDL 697 (1429)
Q Consensus 649 tqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsdl 697 (1429)
++ .+++.+.++|+.+|..+|+++++|++|.+..
T Consensus 823 --~~--------------~~~~~~~~~l~~~l~~~G~~~i~~l~g~~~~ 855 (1025)
T 1gte_A 823 --DF--------------TVIQDYCTGLKALLYLKSIEELQGWDGQSPG 855 (1025)
T ss_dssp --CT--------------THHHHHHHHHHHHHHHTTCGGGTTSBTTBCC
T ss_pred --Cc--------------cHHHHHHHHHHHHHHHcCCCCHHHHhCCCcc
Confidence 11 4578889999999999999999999986543
No 126
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.89 E-value=6.2e-09 Score=118.80 Aligned_cols=148 Identities=19% Similarity=0.217 Sum_probs=106.0
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEecccc-ChHHHHHHHHhcCCcEEEEecCCCCCC-----cccccc---ccccCCC-h
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEV-GVGVVASGVAKGKAEHIVISGHDGGTG-----ASSWTG---IKNAGLP-W 575 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~-Gvg~vA~~~akaGaD~I~IsG~~GGTg-----aap~~~---~~~~GiP-~ 575 (1429)
+++.+.++|+.+|+.. +.||+||+.+.. ....++..+.++|+|+|++++...+.. ..+... ....|.+ +
T Consensus 148 ~~~~~~eii~~v~~~~-~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~ 226 (311)
T 1ep3_A 148 DPEVAAALVKACKAVS-KVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIK 226 (311)
T ss_dssp CHHHHHHHHHHHHHHC-SSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGH
T ss_pred CHHHHHHHHHHHHHhc-CCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccch
Confidence 6778899999999986 699999998654 456678889999999999987431110 000000 0011222 1
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHH
Q psy12805 576 ELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELR 655 (1429)
Q Consensus 576 ~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr 655 (1429)
...+..+.+ +.+. .+++||++|||+|+.|+.+++.+|||+|++||+++. +|
T Consensus 227 ~~~~~~i~~-i~~~---~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~----------------------~p--- 277 (311)
T 1ep3_A 227 PVALKLIHQ-VAQD---VDIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFA----------------------DP--- 277 (311)
T ss_dssp HHHHHHHHH-HHTT---CSSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHH----------------------CT---
T ss_pred HHHHHHHHH-HHHh---cCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHc----------------------Cc---
Confidence 122222222 2211 268999999999999999999999999999997765 12
Q ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCC
Q psy12805 656 KKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGR 694 (1429)
Q Consensus 656 ~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGr 694 (1429)
.+++.+.++++.+|...|+++++|++|.
T Consensus 278 -----------~~~~~i~~~l~~~~~~~g~~~~~~~~g~ 305 (311)
T 1ep3_A 278 -----------FVCPKIIDKLPELMDQYRIESLESLIQE 305 (311)
T ss_dssp -----------THHHHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHHHHcCCCCHHHHhCh
Confidence 2477888999999999999999999874
No 127
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.87 E-value=4.6e-09 Score=132.34 Aligned_cols=168 Identities=16% Similarity=0.169 Sum_probs=117.1
Q ss_pred cceEEEccCCCCCcCC-----ccCccchHHHHhhc-cCCCceEEEccccccccHHHHHHhCCCCccccc-----------
Q psy12805 1209 RGFIKYSRETAPYRPA-----EKRLKDWDEIYATQ-HVRKGLRIQAARCMECGVPFCQSSHGCPLGNII----------- 1271 (1429)
Q Consensus 1209 ~gf~kiAtGs~P~~p~-----~~rv~D~~el~~l~-~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iL----------- 1271 (1429)
..++.+|||+.|..|+ ..++.+..+.++.. ..+++++|+|+|.++||++..++..|+++...+
T Consensus 456 ~d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~ 535 (671)
T 1ps9_A 456 FDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDS 535 (671)
T ss_dssp SSEEEECCCEEECCCCCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCT
T ss_pred CCEEEEccCCCcCCCCCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccc
Confidence 4578899999888763 23466777766543 346899999999999999999998887654210
Q ss_pred ------------ccc-------------ch---hhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeC
Q psy12805 1272 ------------PKW-------------ND---LIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVP 1321 (1429)
Q Consensus 1272 ------------p~~-------------d~---lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~ 1321 (1429)
|.+ +. ..+.......+.+.|+++| +.++.++.+++. ++ +... .+
T Consensus 536 ~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~----~~-v~~~-~~ 609 (671)
T 1ps9_A 536 SLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDD----DG-LHVV-IN 609 (671)
T ss_dssp TCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEET----TE-EEEE-ET
T ss_pred cccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeC----Ce-EEEe-cC
Confidence 110 00 0123345667788888888 456788877742 22 2222 45
Q ss_pred CCeeEEEecEEEEeccccCchhhhhhccCccccCCCCEEecCCCCccCCCCEEEeCCCCCCC-CcHHHHHHHHHHHHHHH
Q psy12805 1322 NSEKIFKCDLVLLAMGFLGPERYIANELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQ-SLVVWAISEGRQAAREI 1400 (1429)
Q Consensus 1322 gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~-~lvv~Ai~qGr~AA~nI 1400 (1429)
|+.++++||.||+|+|++ |+..|++.+ + +..++||++|||+... ..+..|++||+.||.+|
T Consensus 610 G~~~~i~~D~Vi~a~G~~-p~~~l~~~l----~-------------~~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 610 GETQVLAVDNVVICAGQE-PNRALAQPL----I-------------DSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp TEEEEECCSEEEECCCEE-ECCTTHHHH----H-------------TTTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred CeEEEEeCCEEEECCCcc-ccHHHHHHH----H-------------hcCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 555789999999999999 455665542 1 1236899999998743 47999999999999875
No 128
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.87 E-value=5.3e-09 Score=126.18 Aligned_cols=175 Identities=15% Similarity=0.150 Sum_probs=111.9
Q ss_pred ceEEEccC--CCCCcCCcc-------CccchHHHHhhc-cCCCceEEEccccccccHHHHHHhCCCCccccccccchhhc
Q psy12805 1210 GFIKYSRE--TAPYRPAEK-------RLKDWDEIYATQ-HVRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIY 1279 (1429)
Q Consensus 1210 gf~kiAtG--s~P~~p~~~-------rv~D~~el~~l~-~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf 1279 (1429)
.++.+||| +.|..|... ++..+.+..+.. ..+++++|||+|.++++++..++..|++|..+...-.. .
T Consensus 156 d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~--~ 233 (464)
T 2xve_A 156 DYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP--M 233 (464)
T ss_dssp SEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC--C
T ss_pred CEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC--C
Confidence 45889999 888877322 123333333332 25789999999999999999999999988433221100 0
Q ss_pred cchHHHHHHHHHHhCCCCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhc-cCccccCCCC
Q psy12805 1280 HNNWSEALNQLLQTNNFPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANE-LDLTLDPRSN 1358 (1429)
Q Consensus 1280 ~~e~~~al~~~Le~~G~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~-lGLeld~~G~ 1358 (1429)
...+ ..++.....+.+++ ++. +.+.++. ++++|.||+|+|++| +..++.. +|++++++|.
T Consensus 234 ~~~~---------~~~V~~~~~V~~i~-----~~~---V~~~dG~-~i~~D~Vi~atG~~p-~~~~l~~~~gl~~~~~~~ 294 (464)
T 2xve_A 234 GYKW---------PENWDERPNLVRVD-----TEN---AYFADGS-SEKVDAIILCTGYIH-HFPFLNDDLRLVTNNRLW 294 (464)
T ss_dssp CCCC---------CTTEEECSCEEEEC-----SSE---EEETTSC-EEECSEEEECCCBCC-CCTTBCTTTCCCCCSSSC
T ss_pred CCCC---------CCceEEcCCeEEEe-----CCE---EEECCCC-EEeCCEEEECCCCCC-CCCCcCcccccccCCCcc
Confidence 0000 01221113334441 122 2233333 689999999999994 5556554 7888887655
Q ss_pred EEec--CCCCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCCCC
Q psy12805 1359 YSTV--EKTYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFLMGTSTLP 1411 (1429)
Q Consensus 1359 I~VD--~~~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g~~~~p 1411 (1429)
+ ++ ...++|+.|+|||+|||... .....|..||+.+|+++ .|...+|
T Consensus 295 v-~~~~~~~~~t~~p~i~aiGd~~~~-~~~~~a~~qa~~~a~~l----~G~~~lP 343 (464)
T 2xve_A 295 P-LNLYKGVVWEDNPKFFYIGMQDQW-YSFNMFDAQAWYARDVI----MGRLPLP 343 (464)
T ss_dssp C-SSEETTTEESSSTTEEECSCSCCS-SCHHHHHHHHHHHHHHH----TTSSCCC
T ss_pred c-ccccceEecCCCCCEEEEeCcccc-cchHHHHHHHHHHHHHH----cCCCCCc
Confidence 5 33 22367999999999999764 57788999998888776 4554444
No 129
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=98.75 E-value=1.1e-08 Score=123.65 Aligned_cols=122 Identities=16% Similarity=0.123 Sum_probs=92.3
Q ss_pred HHHHhhccCCCCCC----CCCCCCcc---------cccccccccchHhHHHHHHhhhcccCCCCCCCccceeeccCCCCC
Q psy12805 12 EFRLLAEKCQLEVL----GQHENTRK---------CVAHNGEINTVRGNVNFMKAREGVMKSPHIPDIKQLYPVVEPNLS 78 (1429)
Q Consensus 12 ~~~~~~~~~~~~~~----~~~~~~~r---------~~~hngeint~~gn~~~~~ar~~~~~~~~~~~~~~~~p~~~~~~s 78 (1429)
...+.|-||+|+.. +.|| |+ .|+|||||+..+..++.+.++- ..-.+.|
T Consensus 65 ~~~igH~R~at~g~~~~~n~qP--~~~~~~~~g~~~l~hNG~I~N~~~Lr~~L~~~g----------------~~f~~~s 126 (459)
T 1ao0_A 65 KGAIGHVRYATAGGGGYENVQP--LLFRSQNNGSLALAHNGNLVNATQLKQQLENQG----------------SIFQTSS 126 (459)
T ss_dssp SEEEEEEECCC----CGGGSSS--EEEBCTTTCCEEEEEEEEETTHHHHHHHHHHTT----------------CCCCSSC
T ss_pred CEEEEEEecCCCCCCCccCCCC--ceeccCCCCcEEEEEEEEecCHHHHHHHHHhcC----------------CcCCCCC
Confidence 45789999999875 3455 44 2899999987776666665432 1225789
Q ss_pred chHHHHHHHHhhCccccccCCCCCHHHHHHHHHHhhccCCCCcceEEEEEcCCeEEEecccCCCCCCcEEEEeCCEEEEE
Q psy12805 79 DSGAADCAVMTMVPEAWQNDGTMPDEKRDFYNWAACAMEPWDGPALLTFTDGRYIGAILDRNGLRPSRFYVLKDNVMVMA 158 (1429)
Q Consensus 79 ds~~~d~a~~~~~p~a~~~~~~~~~~~~~~y~~~~~~~epwdgpa~~~~~dg~~~ga~ldrnglrp~r~~~~~d~~~~~~ 158 (1429)
||..+-+.+. .|.. .+++++....++.|+|+.++++.|++.+-+.-||+|+||.-|. ..|+.+++|
T Consensus 127 DsEvi~~l~~-----~~~~--------~~~~~a~~~~~~~l~G~fa~~i~d~~~l~~~RD~~G~rPL~~~-~~~~~~~~A 192 (459)
T 1ao0_A 127 DTEVLAHLIK-----RSGH--------FTLKDQIKNSLSMLKGAYAFLIMTETEMIVALDPNGLRPLSIG-MMGDAYVVA 192 (459)
T ss_dssp HHHHHHHHHH-----TCCC--------SSHHHHHHHHHTTCCEEEEEEEECSSEEEEEECTTCCSCCEEE-EETTEEEEE
T ss_pred HHHHHHHHHH-----Hhcc--------CCHHHHHHHHHHhhccceEEEEEeCCEEEEEECCCCCCCeEEE-ecCCEEEEE
Confidence 9999888664 2321 3678888889999999999999999999999999999999554 457789999
Q ss_pred eeccccc
Q psy12805 159 SEVGVYD 165 (1429)
Q Consensus 159 se~g~~~ 165 (1429)
||...++
T Consensus 193 SE~~al~ 199 (459)
T 1ao0_A 193 SETCAFD 199 (459)
T ss_dssp SSTHHHH
T ss_pred ECchHHh
Confidence 9986554
No 130
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=98.71 E-value=1.2e-07 Score=110.83 Aligned_cols=153 Identities=17% Similarity=0.161 Sum_probs=102.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEeccccChHH---HHHHHHhc-CCcEEEEecCCC-------CCCcccccccc----
Q psy12805 505 YSIEDLAELIYDLKCANPNARISVKLVSEVGVGV---VASGVAKG-KAEHIVISGHDG-------GTGASSWTGIK---- 569 (1429)
Q Consensus 505 ~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~---vA~~~aka-GaD~I~IsG~~G-------GTgaap~~~~~---- 569 (1429)
++++.+.+++..+++.. ..|+.||+.+...... .+..+.+. +++.|..-+.-+ .+.........
T Consensus 176 ~~~~~~~~i~~~v~~~~-~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GG 254 (354)
T 3tjx_A 176 YDFDAMRQCLTAVSEVY-PHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGG 254 (354)
T ss_dssp TSHHHHHHHHHHHHHHC-CSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEE
T ss_pred cCHHHHHHHHHHHHHHh-hcccccccCCCCCchhHHHHHHHHHhhcccchhheecccccccccccccccccccCcccccc
Confidence 47788999999999987 7899999998765332 33333443 444443321100 01000000000
Q ss_pred ccCCCh-HHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccce
Q psy12805 570 NAGLPW-ELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIA 648 (1429)
Q Consensus 570 ~~GiP~-~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~gia 648 (1429)
..|.|. ..++..+++...+. ..++||++|||.|+.|+++++++||++|+++|+++.-
T Consensus 255 lSG~~~~~~a~~~v~~~~~~~---~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~------------------- 312 (354)
T 3tjx_A 255 LGGRYVLPTALANINAFYRRC---PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEE------------------- 312 (354)
T ss_dssp EEGGGGHHHHHHHHHHHHHHC---TTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHH-------------------
T ss_pred cCchhhHHHHHHHHHHHHHhc---CCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhc-------------------
Confidence 123333 34555554433322 2589999999999999999999999999999976541
Q ss_pred ecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhhcCCCc
Q psy12805 649 TQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADLVGRTD 696 (1429)
Q Consensus 649 tqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~ElvGrsd 696 (1429)
+| .+++.|.+||.++|.+.|+++++|++|+..
T Consensus 313 --GP--------------~~~~~I~~~L~~~L~~~G~~si~e~~G~~~ 344 (354)
T 3tjx_A 313 --GP--------------SIFERLTSELLGVMAKKRYQTLDEFRGKVR 344 (354)
T ss_dssp --CT--------------THHHHHHHHHHHHHHHHTCCSGGGTTTCCB
T ss_pred --Cc--------------hHHHHHHHHHHHHHHHcCCCCHHHHhChhh
Confidence 22 247889999999999999999999999754
No 131
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.70 E-value=5.2e-08 Score=106.57 Aligned_cols=157 Identities=17% Similarity=0.105 Sum_probs=100.5
Q ss_pred CceEEEccccccccHHHHHHhCCCCcccccccc----------------chh---h------ccchHHHHHHHHHHhC-C
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNIIPKW----------------NDL---I------YHNNWSEALNQLLQTN-N 1295 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~----------------d~l---v------f~~e~~~al~~~Le~~-G 1295 (1429)
-+++|||||..||+.+..+++.|++|..+-+.. ..+ + ...++.+.+.+.+++. +
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 469999999999999999999998883221110 000 0 0125667777878775 6
Q ss_pred --CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCch----------------------hhhhhccCc
Q psy12805 1296 --FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPE----------------------RYIANELDL 1351 (1429)
Q Consensus 1296 --~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~----------------------~~Lle~lGL 1351 (1429)
+. ..++..+... ++.+..+...++ +++++|.||+|+|..... ...+++.|+
T Consensus 84 v~i~-~~~v~~i~~~---~~~v~~v~~~~g-~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~ 158 (232)
T 2cul_A 84 LHLF-QATATGLLLE---GNRVVGVRTWEG-PPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGF 158 (232)
T ss_dssp EEEE-ECCEEEEEEE---TTEEEEEEETTS-CCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTC
T ss_pred cEEE-EeEEEEEEEe---CCEEEEEEECCC-CEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCC
Confidence 22 3456666442 344322333333 369999999999983221 112345566
Q ss_pred cccCCCC---------------EEe-----cCC-CCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q psy12805 1352 TLDPRSN---------------YST-----VEK-TYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFL 1404 (1429)
Q Consensus 1352 eld~~G~---------------I~V-----D~~-~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L 1404 (1429)
+++.... ... +.. ...|++|+|||+|||+ .......|+.+|+.+|.+|.+.|
T Consensus 159 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 159 RFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp CEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCCCHHHHHHHHHHHHHHHHHHC
T ss_pred eEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCccHHHHHHHHHHHHHHHHhhc
Confidence 5542110 001 000 1238999999999999 77788899999999999998876
No 132
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.68 E-value=1.8e-08 Score=120.42 Aligned_cols=169 Identities=10% Similarity=0.005 Sum_probs=108.0
Q ss_pred ceEEEccCC--CCCcCCccC-----------ccchHHHHhhc-cCCCceEEEccccccccHHHHHHhCCCC-cccccccc
Q psy12805 1210 GFIKYSRET--APYRPAEKR-----------LKDWDEIYATQ-HVRKGLRIQAARCMECGVPFCQSSHGCP-LGNIIPKW 1274 (1429)
Q Consensus 1210 gf~kiAtGs--~P~~p~~~r-----------v~D~~el~~l~-~~pk~lvVIGaGcIgcE~a~c~s~~Gc~-V~~iLp~~ 1274 (1429)
.++.+|+|+ .|..|.... +.++.+..+.. ..+++++|||+|.++++++..++..|.+ |..+...
T Consensus 167 d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~- 245 (447)
T 2gv8_A 167 DAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLG- 245 (447)
T ss_dssp SEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTT-
T ss_pred CEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCC-
Confidence 458899997 787764322 22233322222 2468999999999999999999988888 6332221
Q ss_pred chhhccchHHHHHHHHHHhCCCCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhh-----hhcc
Q psy12805 1275 NDLIYHNNWSEALNQLLQTNNFPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYI-----ANEL 1349 (1429)
Q Consensus 1275 d~lvf~~e~~~al~~~Le~~G~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~L-----le~l 1349 (1429)
.. + ++..++.....+.+++. +++. +.+.++...+++|.||+|+|++ |+..+ ++.+
T Consensus 246 ~~------~-------l~~~~i~~~~~v~~~~~---~~~~---v~~~dG~~~~~~D~vi~atG~~-~~~~~l~~~~l~~~ 305 (447)
T 2gv8_A 246 GG------D-------IQNESLQQVPEITKFDP---TTRE---IYLKGGKVLSNIDRVIYCTGYL-YSVPFPSLAKLKSP 305 (447)
T ss_dssp CC------S-------CBCSSEEEECCEEEEET---TTTE---EEETTTEEECCCSEEEECCCBC-CCCCCHHHHSCCST
T ss_pred CC------c-------CCCCCeEEecCeEEEec---CCCE---EEECCCCEeccCCEEEECCCCC-cCCCCCcccccccc
Confidence 11 1 23334433344444431 2222 2334444457999999999999 45566 6655
Q ss_pred CccccCCCCEEecCCCC---ccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHH
Q psy12805 1350 DLTLDPRSNYSTVEKTY---LTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1350 GLeld~~G~I~VD~~~~---~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
+..+..++++.++. +. .|+.|+||++||+... .+...|..||+.||+++.
T Consensus 306 ~~~i~~~~~~~~~~-~~~v~~~~~p~l~~~G~~~~~-~~~~~a~~qa~~~a~~~~ 358 (447)
T 2gv8_A 306 ETKLIDDGSHVHNV-YQHIFYIPDPTLAFVGLALHV-VPFPTSQAQAAFLARVWS 358 (447)
T ss_dssp TTCCCSSSSSCCSE-ETTTEETTCTTEEESSCCBSS-CHHHHHHHHHHHHHHHHT
T ss_pred cCceecCCCccccc-ccccccCCCCcEEEEeccccc-cCchHHHHHHHHHHHHHc
Confidence 32222235555553 33 3899999999999765 478889999999998874
No 133
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=98.67 E-value=2.2e-08 Score=122.37 Aligned_cols=134 Identities=16% Similarity=0.104 Sum_probs=96.4
Q ss_pred HHHhhccCCCCCC----CCCCC----Ccc-cccccccccchHhHHHHHHhhhcccCCCCCCCccceeeccCCCCCchHHH
Q psy12805 13 FRLLAEKCQLEVL----GQHEN----TRK-CVAHNGEINTVRGNVNFMKAREGVMKSPHIPDIKQLYPVVEPNLSDSGAA 83 (1429)
Q Consensus 13 ~~~~~~~~~~~~~----~~~~~----~~r-~~~hngeint~~gn~~~~~ar~~~~~~~~~~~~~~~~p~~~~~~sds~~~ 83 (1429)
.++.|-||+|+.. +.||+ +.+ .|+|||||+..+..+..+.++-. ..-.+.|||..+
T Consensus 67 ~~igH~R~sT~G~~~~~n~QP~~~~~~~~~~l~hNG~i~N~~eLr~~L~~~g~---------------~~f~s~sDsEvi 131 (504)
T 1ecf_A 67 MGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKR---------------RHINTTSDSEIL 131 (504)
T ss_dssp EEEEEEECCBTTBCTTSCCSCEEECSSSCEEEEEEEEETTHHHHHHHHHHHHC---------------CCCCSSCHHHHH
T ss_pred EEEEEEccCcCCCCCccccCCeEeccCCCEEEEEeeeecCHHHHHHHHHhhCC---------------CCCCCCCHHHHH
Confidence 5788999999875 34552 112 48999999876666555543210 123578999999
Q ss_pred HHHHHhhCccccccCCCCCHHHHHHHHHHhhccCCCCcceEEEE-EcCCeEEEecccCCCCCCcEEEEe--C--CEEEEE
Q psy12805 84 DCAVMTMVPEAWQNDGTMPDEKRDFYNWAACAMEPWDGPALLTF-TDGRYIGAILDRNGLRPSRFYVLK--D--NVMVMA 158 (1429)
Q Consensus 84 d~a~~~~~p~a~~~~~~~~~~~~~~y~~~~~~~epwdgpa~~~~-~dg~~~ga~ldrnglrp~r~~~~~--d--~~~~~~ 158 (1429)
-+.+.-.. ..|. .+.+...++++.....++.|+|+.++++ ++++.+-+.-|++|+||.-|..++ | +.+++|
T Consensus 132 ~~l~~~~~-~~~g---~~~~~~~~~~~a~~~~~~~l~G~fa~v~~~~~~~l~a~RD~~GirPL~~g~~~~~~g~~~~~~A 207 (504)
T 1ecf_A 132 LNIFASEL-DNFR---HYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVA 207 (504)
T ss_dssp HHHHHHHH-TTCC---SSSCCHHHHHHHHHHHHHHCCEEEEEEEEETTTEEEEEECTTCCSCCEEEEEECSSSCEEEEEE
T ss_pred HHHHHHHH-Hhcc---ccccccccHHHHHHHhhhhcCccceEEEEEcCCeEEEEECCCCCCceEEeecccCCCceEEEEE
Confidence 88654321 1111 1233456899999999999999999987 668889999999999999777763 4 489999
Q ss_pred eeccccc
Q psy12805 159 SEVGVYD 165 (1429)
Q Consensus 159 se~g~~~ 165 (1429)
||...++
T Consensus 208 SE~~al~ 214 (504)
T 1ecf_A 208 SESVALD 214 (504)
T ss_dssp SSTHHHH
T ss_pred eCchHhh
Confidence 9987764
No 134
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*
Probab=98.64 E-value=3e-08 Score=109.94 Aligned_cols=123 Identities=15% Similarity=0.010 Sum_probs=89.2
Q ss_pred HHHHhhccCCCCCCC-CCC-CCcc----cccccccccchHhHHHHHHhhhcccCCCCCCCccceeeccCCCCCchHHHHH
Q psy12805 12 EFRLLAEKCQLEVLG-QHE-NTRK----CVAHNGEINTVRGNVNFMKAREGVMKSPHIPDIKQLYPVVEPNLSDSGAADC 85 (1429)
Q Consensus 12 ~~~~~~~~~~~~~~~-~~~-~~~r----~~~hngeint~~gn~~~~~ar~~~~~~~~~~~~~~~~p~~~~~~sds~~~d~ 85 (1429)
...+.|.||+|+... |-. |||+ +|+|||||...+.+++++.++.. .-.+.|||..+-+
T Consensus 66 ~~~igH~R~at~g~~~~~n~qP~~~~~~~l~hNG~I~N~~~lr~~L~~~g~----------------~f~~~sDsEvi~~ 129 (240)
T 1xff_A 66 GTGIAHTRWATHGEPSEVNAHPHVSEHIVVVHNGIIENHEPLREELKARGY----------------TFVSETDTEVIAH 129 (240)
T ss_dssp SEEEEEEECCSSSCSSTTTSSCEEETTEEEEEEEEETTHHHHHHHHHHTTC----------------CCCSCCSHHHHHH
T ss_pred cEEEEEEeccCCCCCCcccCCCcccCCEEEEEEEEECCHHHHHHHHHhCCC----------------CCCCCCHHHHHHH
Confidence 457889999999753 222 6667 89999999999999999986531 1247899999988
Q ss_pred HHHhhCccccccCCCCCHHHHHHHHHHhhccCCCCcceEEEEEc---CCeEEEecccCCCCCCcEEEEeCCEEEEEeecc
Q psy12805 86 AVMTMVPEAWQNDGTMPDEKRDFYNWAACAMEPWDGPALLTFTD---GRYIGAILDRNGLRPSRFYVLKDNVMVMASEVG 162 (1429)
Q Consensus 86 a~~~~~p~a~~~~~~~~~~~~~~y~~~~~~~epwdgpa~~~~~d---g~~~ga~ldrnglrp~r~~~~~d~~~~~~se~g 162 (1429)
.+.-.... .. ++.+-...+++.|+|+.++++.| ++.+-+.-|+ ||.-|. ..|+.+++|||..
T Consensus 130 l~~~~~~~----g~-------~~~~ai~~~~~~l~G~fa~~i~d~~~~~~l~~~Rd~---~PL~~~-~~~~~~~~aSE~~ 194 (240)
T 1xff_A 130 LVNWELKQ----GG-------TLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSG---SPLVIG-LGMGENFIASDQL 194 (240)
T ss_dssp HHHHHHHT----SS-------CHHHHHHHHGGGCCEEEEEEEEETTCTTCEEEEEEB---SCCEEE-ECSSCEEEESSGG
T ss_pred HHHHHHhc----CC-------CHHHHHHHHHHhcccceEEEEEecCCCCEEEEEECC---CceEEE-EeCCEEEEEECHH
Confidence 66432211 11 12333345678899999999985 6778888888 999554 4566789999997
Q ss_pred ccc
Q psy12805 163 VYD 165 (1429)
Q Consensus 163 ~~~ 165 (1429)
.+.
T Consensus 195 al~ 197 (240)
T 1xff_A 195 ALL 197 (240)
T ss_dssp GTT
T ss_pred HHH
Confidence 664
No 135
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.51 E-value=2e-07 Score=108.15 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=84.2
Q ss_pred CCCCCHHHHHHHHHHHHHhC--------CCCeEEEEeccccC---hHHHHHHHHhcCCcEEEEecCCCCCC-c-cccccc
Q psy12805 502 HDIYSIEDLAELIYDLKCAN--------PNARISVKLVSEVG---VGVVASGVAKGKAEHIVISGHDGGTG-A-SSWTGI 568 (1429)
Q Consensus 502 ~di~siedL~qlI~~Lk~~~--------~~~pV~VKLv~e~G---vg~vA~~~akaGaD~I~IsG~~GGTg-a-ap~~~~ 568 (1429)
+...+.+.+.++++.+|+.. ++.||+||+.+... +..+|..+.++|+|.|+++++..+.- . .+....
T Consensus 182 ~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~ 261 (336)
T 1f76_A 182 RTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCD 261 (336)
T ss_dssp GGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTT
T ss_pred ccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccc
Confidence 34556778889999999886 27899999987643 34467888999999999998632110 0 000000
Q ss_pred cc---cCCC-hH---HHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 569 KN---AGLP-WE---LGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 569 ~~---~GiP-~~---laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
.. .|.| +. ..+.++.+.+ ..+++||++|||+|+.|+.+++.+|||+|++||+++.
T Consensus 262 ~~gg~~g~~~~~~~~~~i~~i~~~~-----~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 262 QTGGLSGRPLQLKSTEIIRRLSLEL-----NGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp CSSEEEEGGGHHHHHHHHHHHHHHH-----TTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred cCCCcCCchhHHHHHHHHHHHHHHh-----CCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 11 1211 11 2333444432 3469999999999999999999999999999997665
No 136
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=98.44 E-value=5.3e-07 Score=104.45 Aligned_cols=98 Identities=19% Similarity=0.290 Sum_probs=72.6
Q ss_pred HHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccC-CChHHHHHHHHHHHHhcCC
Q psy12805 513 LIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAG-LPWELGVAETHQVLALNNL 591 (1429)
Q Consensus 513 lI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~G-iP~~laL~ev~q~L~~~gL 591 (1429)
+++.+|+. +.+|++++. ....|..+.++|+|.|+++|...|+ +.| .+....+.++.+.+
T Consensus 116 ~~~~l~~~--g~~v~~~v~----s~~~a~~a~~~GaD~i~v~g~~~GG---------~~G~~~~~~ll~~i~~~~----- 175 (326)
T 3bo9_A 116 YIRELKEN--GTKVIPVVA----SDSLARMVERAGADAVIAEGMESGG---------HIGEVTTFVLVNKVSRSV----- 175 (326)
T ss_dssp HHHHHHHT--TCEEEEEES----SHHHHHHHHHTTCSCEEEECTTSSE---------ECCSSCHHHHHHHHHHHC-----
T ss_pred HHHHHHHc--CCcEEEEcC----CHHHHHHHHHcCCCEEEEECCCCCc---------cCCCccHHHHHHHHHHHc-----
Confidence 45666664 678888753 2345677889999999999865332 111 45555556555432
Q ss_pred CCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhcc
Q psy12805 592 RSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGC 632 (1429)
Q Consensus 592 R~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc 632 (1429)
+++|+++|||+++.|+.+++.+||++|.+||.++.+..|
T Consensus 176 --~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e~ 214 (326)
T 3bo9_A 176 --NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVES 214 (326)
T ss_dssp --SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBSSC
T ss_pred --CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCccc
Confidence 589999999999999999999999999999998876654
No 137
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=98.41 E-value=4.2e-07 Score=105.46 Aligned_cols=99 Identities=17% Similarity=0.215 Sum_probs=73.3
Q ss_pred HHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccC-CChHHHHHHHHHHHHhcCC
Q psy12805 513 LIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAG-LPWELGVAETHQVLALNNL 591 (1429)
Q Consensus 513 lI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~G-iP~~laL~ev~q~L~~~gL 591 (1429)
+++.+|+. +.||++|+. ....+..+.++|+|+|+++|...|. +.| .+....+.++.+.+
T Consensus 102 ~i~~l~~~--g~~v~~~v~----~~~~a~~~~~~GaD~i~v~g~~~GG---------~~g~~~~~~ll~~i~~~~----- 161 (332)
T 2z6i_A 102 YMERFHEA--GIIVIPVVP----SVALAKRMEKIGADAVIAEGMEAGG---------HIGKLTTMTLVRQVATAI----- 161 (332)
T ss_dssp THHHHHHT--TCEEEEEES----SHHHHHHHHHTTCSCEEEECTTSSE---------ECCSSCHHHHHHHHHHHC-----
T ss_pred HHHHHHHc--CCeEEEEeC----CHHHHHHHHHcCCCEEEEECCCCCC---------CCCCccHHHHHHHHHHhc-----
Confidence 45666664 689999964 2345677889999999999874221 112 34445555555432
Q ss_pred CCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccc
Q psy12805 592 RSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCT 633 (1429)
Q Consensus 592 R~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~ 633 (1429)
+++|+++|||.++.|+.+++.+|||.|.+||.++....|.
T Consensus 162 --~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e~~ 201 (332)
T 2z6i_A 162 --SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESN 201 (332)
T ss_dssp --SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTTCC
T ss_pred --CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCcccc
Confidence 5899999999999999999999999999999888766553
No 138
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.29 E-value=4.5e-07 Score=125.37 Aligned_cols=205 Identities=17% Similarity=0.120 Sum_probs=120.6
Q ss_pred ccceeeCCCCCccchHHHHHHHHHHHHHhCCcEEe-cCCCCCccccccCCCcccccceeecc--cCCCCCChhhhccccc
Q psy12805 381 VKRFATGAMSFGSISIEAHTTLAKAMNKIGAKSNT-GEGGENPERYLSSGDENQRSAIKQVA--SGRFGVTSSYLAHADD 457 (1429)
Q Consensus 381 ~~pf~i~aMS~GslS~ea~~aLA~aa~~~G~~~~t-GEGg~~~~~~~~~~~~~~~~~I~Q~a--sgrfGv~~~~L~~a~~ 457 (1429)
..|++.++|+.+.-..+ ||.|+.+.|+.-.. |-|..+++.+. ..-..+++.. ...|||+.-++.. +.
T Consensus 582 ~~PIi~a~M~~~vs~~~----LaaAva~aGglG~i~g~g~~~~e~l~-----~~i~~vk~~~~~~~p~gvN~~~~~p-~~ 651 (2060)
T 2uva_G 582 VPPVMVAGMTPTTVPWD----FVAATMNAGYHIELAGGGYYNAQKMS-----DAISKIEKAIPPGRGITVNLIYVNP-RA 651 (2060)
T ss_dssp SCSEEECCCTTTTCSHH----HHHHHHHTTCEECEEGGGCCSHHHHH-----HHHHHHGGGSCTTCCEEEEEETTCT-TH
T ss_pred cceEEecCCCCccccHH----HHHHHHHCCCEEEECcCCCCCHHHHH-----HHHHHHHhhcccCCCeEecccccCc-cc
Confidence 38999999997743333 89999999987666 76767777642 1112334433 3557877644321 10
Q ss_pred hhhhcccCCCCCCCCCcccccchHHHHhccCCCCcc-ccccCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccCh
Q psy12805 458 LQIKMAQGAKPGEGGELPGYKVTKDIASTRHSVPGV-GLISPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGV 536 (1429)
Q Consensus 458 ieIk~gQGAKpG~GG~lpg~KV~~~iA~~r~~~pg~-~LisP~~h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gv 536 (1429)
- ....+.+..++...+-+ .+....+ +.+.|++.++++.+ +.+++ ++++.+--
T Consensus 652 ~------------------~~~~~~~~~~~~~gv~i~gv~~~~G---~p~~e~~~~~l~~~-----gi~~i-~~v~~~~~ 704 (2060)
T 2uva_G 652 M------------------GWQIPLLGRLRADGVPIEGLTIGAG---VPSIEVANEYIQTL-----GIRHI-SFKPGSVD 704 (2060)
T ss_dssp H------------------HHHHHHHHHHHTTTCCEEEEEEESS---CCCHHHHHHHHHHS-----CCSEE-EECCCSHH
T ss_pred c------------------hhHHHHHHHHHHcCCCcceEeecCC---CCCHHHHHHHHHHc-----CCeEE-EecCCHHH
Confidence 0 00112222222221111 1111112 22556666655554 56665 44433211
Q ss_pred HH-HHHHHHhcCCcEEE---EecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHH
Q psy12805 537 GV-VASGVAKGKAEHIV---ISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVA 612 (1429)
Q Consensus 537 g~-vA~~~akaGaD~I~---IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kA 612 (1429)
.. .+..++++|+|+|+ +.|.++|.+.+. .+.+.|++..+.++.+.+ +++||++|||.|++|++++
T Consensus 705 a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~----~d~~~~~l~lv~~i~~~~-------~ipviaaGGI~~g~~i~aa 773 (2060)
T 2uva_G 705 AIQQVINIAKANPTFPIILQWTGGRGGGHHSF----EDFHQPILLMYSRIRKCS-------NIVLVAGSGFGGSEDTYPY 773 (2060)
T ss_dssp HHHHHHHHHHHCTTSCEEEEECCTTSSSSCCS----CCSHHHHHHHHHHHHTST-------TEEEEEESSCCSHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeeeEcccCCCCCCc----ccccchHHHHHHHHHHHc-------CCCEEEeCCCCCHHHHHHH
Confidence 11 22345899999999 888665543221 122345544455444322 5999999999999999999
Q ss_pred H-----------HhcchhhhcchhHHHHhccc
Q psy12805 613 A-----------LLGADEIGLSTAPLITMGCT 633 (1429)
Q Consensus 613 l-----------aLGAdavg~gt~~L~algc~ 633 (1429)
+ +||||+|.+||.++.+..|.
T Consensus 774 ltg~ws~~~g~palGAdgV~~GT~f~~t~Ea~ 805 (2060)
T 2uva_G 774 LTGSWSTKFGYPPMPFDGCMFGSRMMTAKEAH 805 (2060)
T ss_dssp HHTCGGGTTTSCCCCCSCEEESGGGGGBTTSC
T ss_pred hcCcchhhcCCCCCCCCEEEEchhhhcCcCCC
Confidence 9 99999999999999887764
No 139
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=98.16 E-value=2.4e-06 Score=106.68 Aligned_cols=128 Identities=14% Similarity=0.007 Sum_probs=90.6
Q ss_pred HHHhhccCCCCCCC-CCC-CCcc----cccccccccchHhHHHHHHhhhcccCCCCCCCccceeeccCCCCCchHHHHHH
Q psy12805 13 FRLLAEKCQLEVLG-QHE-NTRK----CVAHNGEINTVRGNVNFMKAREGVMKSPHIPDIKQLYPVVEPNLSDSGAADCA 86 (1429)
Q Consensus 13 ~~~~~~~~~~~~~~-~~~-~~~r----~~~hngeint~~gn~~~~~ar~~~~~~~~~~~~~~~~p~~~~~~sds~~~d~a 86 (1429)
..+.|.|++|+... |.. |||+ .++|||||+..+..++++.++... -.+.|||..+-+.
T Consensus 67 ~~igH~R~at~g~~~~~n~qP~~~~~~~lvhNG~I~N~~~Lr~~L~~~g~~----------------f~s~tDtEvi~~l 130 (608)
T 2bpl_A 67 TGIAHTRWATHGEPSEVNAHPHVSEHIVVVHNGIIENHEPLREELKARGYT----------------FVSETDTEVIAHL 130 (608)
T ss_dssp EEEEEEECCCSSSCCGGGCSCEEETTEEEEEEECCTTHHHHHHHHHHHTCC----------------CSCCCHHHHHHHH
T ss_pred EEEEEEccCCCCCCCccCCCCccCCCEEEEEEEEEeCHHHHHHHHHhcCCC----------------CCCCCHHHHHHHH
Confidence 46789999999752 322 5556 799999999999999999876421 2467999998886
Q ss_pred HHhhCccccccCCCCCHHHHHHHHHHhhccCCCCcceEEEEEcC---CeEEEecccCCCCCCcEEEEeCCEEEEEeeccc
Q psy12805 87 VMTMVPEAWQNDGTMPDEKRDFYNWAACAMEPWDGPALLTFTDG---RYIGAILDRNGLRPSRFYVLKDNVMVMASEVGV 163 (1429)
Q Consensus 87 ~~~~~p~a~~~~~~~~~~~~~~y~~~~~~~epwdgpa~~~~~dg---~~~ga~ldrnglrp~r~~~~~d~~~~~~se~g~ 163 (1429)
+.-.. +... ++.+-....++.|+|+.++++.|+ +.+-+.-|+ ||.-|.. .|+.+++|||...
T Consensus 131 ~~~~~----~~g~-------~~~~av~~~~~~l~G~fa~~i~d~~~~~~l~~aRd~---~PL~~g~-~~~~~~~aSe~~a 195 (608)
T 2bpl_A 131 VNWEL----KQGG-------TLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSG---SPLVIGL-GMGENFIASDQLA 195 (608)
T ss_dssp HHHHH----TTCC-------CHHHHHHHHGGGCCSSEEEEEEETTCTTCEEEEEEB---SCCEEEE-CSSCEEEESSGGG
T ss_pred HHHHH----hcCC-------CHHHHHHHHHHhhcCceEEEEEecCCCCEEEEEECC---CceEEEE-eCCeEEEEechHH
Confidence 64321 1111 233334456789999999999998 567777787 9995554 4567899999977
Q ss_pred cccCCCCc
Q psy12805 164 YDTDPANV 171 (1429)
Q Consensus 164 ~~~~~~~v 171 (1429)
+.--++++
T Consensus 196 l~~~~~~~ 203 (608)
T 2bpl_A 196 LLPVTRRF 203 (608)
T ss_dssp TTTTCCEE
T ss_pred HHhcCCeE
Confidence 64333333
No 140
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=98.16 E-value=3.4e-06 Score=97.47 Aligned_cols=102 Identities=23% Similarity=0.258 Sum_probs=71.7
Q ss_pred HHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCC
Q psy12805 512 ELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNL 591 (1429)
Q Consensus 512 qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gL 591 (1429)
+.++.+|+. +.||+++.. ....+..+.++|+|.|+++|...|..... ...+....+.++.+.
T Consensus 109 ~~~~~l~~~--gi~vi~~v~----t~~~a~~~~~~GaD~i~v~g~~~GG~~G~------~~~~~~~~l~~v~~~------ 170 (328)
T 2gjl_A 109 EHIAEFRRH--GVKVIHKCT----AVRHALKAERLGVDAVSIDGFECAGHPGE------DDIPGLVLLPAAANR------ 170 (328)
T ss_dssp HHHHHHHHT--TCEEEEEES----SHHHHHHHHHTTCSEEEEECTTCSBCCCS------SCCCHHHHHHHHHTT------
T ss_pred HHHHHHHHc--CCCEEeeCC----CHHHHHHHHHcCCCEEEEECCCCCcCCCC------ccccHHHHHHHHHHh------
Confidence 456667665 678887742 23456778899999999998754321110 123444445544332
Q ss_pred CCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhcc
Q psy12805 592 RSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGC 632 (1429)
Q Consensus 592 R~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc 632 (1429)
.+++|+++|||+++.|+.+++.+||+.|.+||+++....|
T Consensus 171 -~~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~e~ 210 (328)
T 2gjl_A 171 -LRVPIIASGGFADGRGLVAALALGADAINMGTRFLATREC 210 (328)
T ss_dssp -CCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTSSSS
T ss_pred -cCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCccc
Confidence 2689999999999999999999999999999988765543
No 141
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.08 E-value=1.9e-05 Score=92.78 Aligned_cols=107 Identities=23% Similarity=0.258 Sum_probs=72.2
Q ss_pred HHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCC-C-CCccccccccccC--CChHHHHHHHHHHHH
Q psy12805 512 ELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDG-G-TGASSWTGIKNAG--LPWELGVAETHQVLA 587 (1429)
Q Consensus 512 qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~G-G-Tgaap~~~~~~~G--iP~~laL~ev~q~L~ 587 (1429)
+.++.+|+. +.+|++++. ....+..+.++|+|+|+++|... | +|... ......+ .++...+.++.+.
T Consensus 136 ~~i~~~~~~--g~~v~~~v~----t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~-~~~~~~~~~~~~~~~l~~i~~~-- 206 (369)
T 3bw2_A 136 EVIARLRRA--GTLTLVTAT----TPEEARAVEAAGADAVIAQGVEAGGHQGTHR-DSSEDDGAGIGLLSLLAQVREA-- 206 (369)
T ss_dssp HHHHHHHHT--TCEEEEEES----SHHHHHHHHHTTCSEEEEECTTCSEECCCSS-CCGGGTTCCCCHHHHHHHHHHH--
T ss_pred HHHHHHHHC--CCeEEEECC----CHHHHHHHHHcCCCEEEEeCCCcCCcCCCcc-cccccccccccHHHHHHHHHHh--
Confidence 355566664 678888753 22346778899999999988642 2 12111 1111112 4534445555443
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhcc
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGC 632 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc 632 (1429)
.+++|+++|||.++.|+.+++.+||+.|.+||.++..-.|
T Consensus 207 -----~~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~ 246 (369)
T 3bw2_A 207 -----VDIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDES 246 (369)
T ss_dssp -----CSSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTC
T ss_pred -----cCceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccc
Confidence 1689999999999999999999999999999988765443
No 142
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=98.08 E-value=3.3e-06 Score=97.33 Aligned_cols=146 Identities=16% Similarity=0.142 Sum_probs=97.0
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEecccc---ChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEV---GVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAET 582 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~---Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev 582 (1429)
.++-+.++|+.+++.. +.||+||+.+.. ..-.+|..+.++|+|.|+|+|.....+ ..+.+....+.+
T Consensus 110 ~~~~~~eiv~~v~~~~-~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~--------~~~~~~~~~i~~- 179 (318)
T 1vhn_A 110 DLRHFRYIVRELRKSV-SGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQS--------FTGRAEWKALSV- 179 (318)
T ss_dssp CHHHHHHHHHHHHHHC-SSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTT--------TSSCCCGGGGGG-
T ss_pred CHHHHHHHHHHHHHhh-CCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCcccc--------CCCCcCHHHHHH-
Confidence 5678899999999987 589999987622 222578889999999999986532111 112222111111
Q ss_pred HHHHHhcCCCCceEEEEcCCcccHHHHHHHHH-hcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhh----
Q psy12805 583 HQVLALNNLRSRVVLQADGQIRTGFDVVVAAL-LGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKK---- 657 (1429)
Q Consensus 583 ~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla-LGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~---- 657 (1429)
++.+++|+++|||+|+.|+.+++. .|||.|.+|++++. +|.+-.+
T Consensus 180 --------i~~~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~----------------------~P~l~~~~~~~ 229 (318)
T 1vhn_A 180 --------LEKRIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIG----------------------RPWIFKQIKDF 229 (318)
T ss_dssp --------SCCSSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTT----------------------CTTHHHHHHHH
T ss_pred --------HHcCCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHh----------------------CcchHHHHHHH
Confidence 112689999999999999999998 89999999997543 2221111
Q ss_pred cC-Cc--HHHHHHHHHHHHHHHHHHHHhcCCC-Chhhh
Q psy12805 658 FA-GK--PEHVINYLFMLAEEVRTHMAKLGIR-KFADL 691 (1429)
Q Consensus 658 ~~-g~--~e~v~ny~~~l~~eLr~iMa~mGi~-sl~El 691 (1429)
+. +. +..+...++.+.+.++..|...|.+ .+.++
T Consensus 230 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 267 (318)
T 1vhn_A 230 LRSGKYSEPSREEILRTFERHLELLIKTKGERKAVVEM 267 (318)
T ss_dssp HHHSCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 10 10 1234556777778888888877753 45554
No 143
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi}
Probab=97.98 E-value=7.4e-06 Score=92.83 Aligned_cols=130 Identities=13% Similarity=0.048 Sum_probs=78.6
Q ss_pred HHhhccCCCCCC----CCCCCCc--ccccccccccchHhHHHHHHhhhcccCCCCCCCccceeecc--CCCCCchHHHHH
Q psy12805 14 RLLAEKCQLEVL----GQHENTR--KCVAHNGEINTVRGNVNFMKAREGVMKSPHIPDIKQLYPVV--EPNLSDSGAADC 85 (1429)
Q Consensus 14 ~~~~~~~~~~~~----~~~~~~~--r~~~hngeint~~gn~~~~~ar~~~~~~~~~~~~~~~~p~~--~~~~sds~~~d~ 85 (1429)
.+.|-||.|... +.||+-. -.++|||+|...+.-+..+.++-. . -+. ..+.|||.-+=.
T Consensus 84 ~igHvR~AT~g~~s~~n~qPf~~g~~~~~HNG~I~N~~~Lr~~L~~~g~----------~---~~f~~~~~~TDSEvi~~ 150 (274)
T 3mdn_A 84 FLSHVRASTGSCISRNNCHPFAARRWCFMHNGQVGGFEAFRKQADMAIA----------D---EFYTYRKGSTDSEVLFL 150 (274)
T ss_dssp EEEEC------------CCCEEETTEEEEEEEEETTGGGGHHHHHHTSC----------H---HHHTTCCSCCHHHHHHH
T ss_pred EEEEEccccCCCCcccCCCCcccCCEEEEEeeEEcCHHHHHHHHHhhCC----------c---ceecCCCCCChHHHHHH
Confidence 578999999653 3555311 268999999876655444432200 0 011 256789988766
Q ss_pred HHHhhCccccccCCCCCHHHHHHHHHHhhccC--CCCcc--eEEEEEcCCeEEEeccc-CCCCCCcEEEEeC--CEEEEE
Q psy12805 86 AVMTMVPEAWQNDGTMPDEKRDFYNWAACAME--PWDGP--ALLTFTDGRYIGAILDR-NGLRPSRFYVLKD--NVMVMA 158 (1429)
Q Consensus 86 a~~~~~p~a~~~~~~~~~~~~~~y~~~~~~~e--pwdgp--a~~~~~dg~~~ga~ldr-nglrp~r~~~~~d--~~~~~~ 158 (1429)
.++- |.....+.+..+++.+.....+. -|++| .+++++||+.+-|.-|+ +|.||.=|+..++ +.+++|
T Consensus 151 l~~~-----~~~~~~~~~al~~~l~~l~G~~~~~g~~~~~a~~~~~~d~~~l~a~Rd~~~G~~Pll~~~~~~~~~~~~vA 225 (274)
T 3mdn_A 151 LALS-----EGLEHDPHGALARAIARLEGLSRAHGTTPHMRLSAAFSDGQTLYAARYSSDHIAPSVYYRYSHARQGWAVV 225 (274)
T ss_dssp HHHH-----TTTTTCHHHHHHHHHHHHHHHHHHHSCSSSEEEEEEEECSSCEEEEEEESSSCCCCCEEEEETTTTEEEEE
T ss_pred HHHH-----hhhcCCHHHHHHHHHHHHHhHHhhcCcccCceEEEEEEcCCEEEEEECCCCCCCCeEEEEEeCCCCEEEEE
Confidence 4422 21122222344455555444432 36788 77788999999999999 9999977888876 789999
Q ss_pred eec
Q psy12805 159 SEV 161 (1429)
Q Consensus 159 se~ 161 (1429)
||.
T Consensus 226 SE~ 228 (274)
T 3mdn_A 226 SEP 228 (274)
T ss_dssp SSC
T ss_pred ecc
Confidence 998
No 144
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=97.73 E-value=0.00014 Score=79.89 Aligned_cols=100 Identities=20% Similarity=0.191 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeccc---cC---hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHH
Q psy12805 507 IEDLAELIYDLKCANPNARISVKLVSE---VG---VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVA 580 (1429)
Q Consensus 507 iedL~qlI~~Lk~~~~~~pV~VKLv~e---~G---vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ 580 (1429)
.+.+.+.|..+++..+ |+.||+..+ .. +...+..+.++|+|+|..+- +..+| | .+...+.
T Consensus 101 ~~~~~~~i~~v~~a~~--pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tst-g~~~g----------g-a~~~~i~ 166 (225)
T 1mzh_A 101 YDFVVEELKEIFRETP--SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTST-GFAPR----------G-TTLEEVR 166 (225)
T ss_dssp HHHHHHHHHHHHHTCT--TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC-SCSSS----------C-CCHHHHH
T ss_pred hHHHHHHHHHHHHHhc--CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECC-CCCCC----------C-CCHHHHH
Confidence 3567777899998874 899999433 22 34467778899999996542 11111 1 2334455
Q ss_pred HHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchh
Q psy12805 581 ETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTA 625 (1429)
Q Consensus 581 ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~ 625 (1429)
++.+.+ ..+++|+++|||+|+.|+.+++.+||+.+|+++.
T Consensus 167 ~v~~~v-----~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 167 LIKSSA-----KGRIKVKASGGIRDLETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp HHHHHH-----TTSSEEEEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred HHHHHh-----CCCCcEEEECCCCCHHHHHHHHHhCchHHHHccH
Confidence 555543 3479999999999999999999999998887764
No 145
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=97.72 E-value=1e-05 Score=111.52 Aligned_cols=204 Identities=14% Similarity=0.089 Sum_probs=116.7
Q ss_pred cceeeCCCCCccchHHHHHHHHHHHHHhCCcEEe-cCCCCCccccccCCCcccccceeeccc--CCCCCChhhhccccc-
Q psy12805 382 KRFATGAMSFGSISIEAHTTLAKAMNKIGAKSNT-GEGGENPERYLSSGDENQRSAIKQVAS--GRFGVTSSYLAHADD- 457 (1429)
Q Consensus 382 ~pf~i~aMS~GslS~ea~~aLA~aa~~~G~~~~t-GEGg~~~~~~~~~~~~~~~~~I~Q~as--grfGv~~~~L~~a~~- 457 (1429)
.|++-++|+. .-..-.|+.|...+|..-.. |-|..+++.+. ... ..+++... ..|||+.-++ +...
T Consensus 590 ~PIi~~gM~~----~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~----~~I-~~~~~~t~~~~~~gvN~~~~-~~~~~ 659 (2051)
T 2uv8_G 590 PPLLVPGMTP----CTVSPDFVAATTNAGYTIELAGGGYFSAAGMT----AAI-DSVVSQIEKGSTFGINLIYV-NPFML 659 (2051)
T ss_dssp CSEEECCCHH----HHTCHHHHHHHHHTTCEEEEEGGGCCSHHHHH----HHH-HHHHHHSCTTCCEEEEEETT-CTTHH
T ss_pred cceecCCCcc----ccccHHHHHHHHcCCcEEEEccCCCCCHHHHH----HHH-HHHHHhcCCCCceEEEEeec-Chhhh
Confidence 7999999962 11134578888888875555 65666777752 111 11222222 4588876443 2111
Q ss_pred -hhhhcccCCCCCCCCCcccccchHHHHhccCCCCcc-ccccCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccC
Q psy12805 458 -LQIKMAQGAKPGEGGELPGYKVTKDIASTRHSVPGV-GLISPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVG 535 (1429)
Q Consensus 458 -ieIk~gQGAKpG~GG~lpg~KV~~~iA~~r~~~pg~-~LisP~~h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e~G 535 (1429)
.|+ +.+..++....-+ .+.... .+.+.|+...+|..+ +.+++.+.++...
T Consensus 660 ~~~~--------------------~~~~~~~~~gv~i~~v~~~a---g~p~~~~~~~~i~~l-----G~~vi~~~~~~~~ 711 (2051)
T 2uv8_G 660 QWGI--------------------PLIKELRSKGYPIQFLTIGA---GVPSLEVASEYIETL-----GLKYLGLKPGSID 711 (2051)
T ss_dssp HHHH--------------------HHHHHHHHTTCSEEEEEEES---SCCCHHHHHHHHHHS-----CCSCEEECCCSHH
T ss_pred hhhH--------------------HHHHHHHHcCCCcceEEecC---CCCchhhHHHHHHHc-----CCEEEEecCchHH
Confidence 111 1111111111111 011111 123567766677766 4555543222111
Q ss_pred hHHHHHHHHhcCCcE---EEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHH
Q psy12805 536 VGVVASGVAKGKAEH---IVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVA 612 (1429)
Q Consensus 536 vg~vA~~~akaGaD~---I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kA 612 (1429)
-...+..++++|+|+ +++.|.++|.+-+ .++.+.+++..++++.+.+ +|+||++|||-+|++++.|
T Consensus 712 a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g----~~d~~~~~l~l~~~v~~~~-------~ipviaaGGi~dg~~~~aa 780 (2051)
T 2uv8_G 712 AISQVINIAKAHPNFPIALQWTGGRGGGHHS----FEDAHTPMLQMYSKIRRHP-------NIMLIFGSGFGSADDTYPY 780 (2051)
T ss_dssp HHHHHHHHHHHSTTSCEEEEECCSSCSEECC----SCCSSHHHHHHHHHHTTCT-------TBCCEEESSCCSHHHHTHH
T ss_pred HHHHHHHHHHhCCCceeEEEEEccCcCCCCC----cccccccHHHHHHHHHhcC-------CceEEEeCCCCCHHHHHHH
Confidence 112345678889999 3667877664221 1233345544455555432 6999999999999999999
Q ss_pred H-----------HhcchhhhcchhHHHHhcccc
Q psy12805 613 A-----------LLGADEIGLSTAPLITMGCTM 634 (1429)
Q Consensus 613 l-----------aLGAdavg~gt~~L~algc~~ 634 (1429)
| +||||.|.|||.+|.+-.|..
T Consensus 781 L~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea~~ 813 (2051)
T 2uv8_G 781 LTGEWSTKFDYPPMPFDGFLFGSRVMIAKEVKT 813 (2051)
T ss_dssp HHTCGGGTTTCCCCCCSCEECSGGGTTSTTSCC
T ss_pred HccccccccCccCCCCceeeechHHHhCccccc
Confidence 9 999999999999999887753
No 146
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=97.68 E-value=0.00016 Score=84.63 Aligned_cols=114 Identities=14% Similarity=0.133 Sum_probs=76.9
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEecccc-------ChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEV-------GVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELG 578 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~-------Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~la 578 (1429)
.++-+.++|+.+++.. +.||.||+-... ....+|..+.++|+|.|+|++.....|.++.......+..| ..
T Consensus 110 ~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~-~~ 187 (350)
T 3b0p_A 110 DLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRH-DW 187 (350)
T ss_dssp CHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCH-HH
T ss_pred CHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccH-HH
Confidence 5678999999999987 799999985422 12346788899999999999764211111110000001122 22
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 579 VAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 579 L~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
+.++.+.+ .+++||+.|||+|+.|+.+++. |||.|.+|+++|.
T Consensus 188 i~~ik~~~------~~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~ 230 (350)
T 3b0p_A 188 VHRLKGDF------PQLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYE 230 (350)
T ss_dssp HHHHHHHC------TTSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHH
T ss_pred HHHHHHhC------CCCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHh
Confidence 33443321 2589999999999999999998 9999999998764
No 147
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.59 E-value=9.8e-05 Score=90.99 Aligned_cols=81 Identities=11% Similarity=0.076 Sum_probs=51.4
Q ss_pred eEEEecEEEEeccccCchhhhhhccC------ccccC-C-CCEEecCCCCccCCCCEEEe-CCCCCCCCcHHHHHHHHHH
Q psy12805 1325 KIFKCDLVLLAMGFLGPERYIANELD------LTLDP-R-SNYSTVEKTYLTTVPRVYAA-GDCRRGQSLVVWAISEGRQ 1395 (1429)
Q Consensus 1325 ~~ieaDlVLlAiG~~pp~~~Lle~lG------Leld~-~-G~I~VD~~~~~TSvPgVFAA-GD~a~g~~lvv~Ai~qGr~ 1395 (1429)
+++++|+||+|+|+.++. .++..++ +.+++ + +...+-...+....|++|.+ |..+...+.+..+-.|++.
T Consensus 369 ~~~~~DvIV~ATGf~~~~-~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~ 447 (540)
T 3gwf_A 369 VLHELDVLVFATGFDAVD-GNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEW 447 (540)
T ss_dssp CEEECSEEEECCCBSCSS-HHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHH
T ss_pred CEEECCEEEECCccCccc-cCcCcceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHH
Confidence 469999999999999543 2333332 22321 0 11222211234478999999 8776556677778888999
Q ss_pred HHHHHHHHHhC
Q psy12805 1396 AAREIDSFLMG 1406 (1429)
Q Consensus 1396 AA~nI~~~L~g 1406 (1429)
+++.|......
T Consensus 448 i~~~i~~~~~~ 458 (540)
T 3gwf_A 448 ISDTIGYAERN 458 (540)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
Confidence 88888665543
No 148
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.56 E-value=9.5e-05 Score=83.23 Aligned_cols=161 Identities=11% Similarity=0.065 Sum_probs=96.9
Q ss_pred CceEEEccccccccHHHHHHhC-CCCccccccc-------------------------c-ch----------h---hccc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSH-GCPLGNIIPK-------------------------W-ND----------L---IYHN 1281 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~-Gc~V~~iLp~-------------------------~-d~----------l---vf~~ 1281 (1429)
-+++|||||..|+..|..+++. |.+|..+-.. | +. . ....
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 3699999999999999999986 8887111000 0 00 0 0123
Q ss_pred hHHHHHHHHHHh-CC--CCCCcEEEEEEEeecCCCceEEEEe----------C---CCeeEEEecEEEEeccccCchhhh
Q psy12805 1282 NWSEALNQLLQT-NN--FPAGIKTVKVEWTKDATGRWKMDEV----------P---NSEKIFKCDLVLLAMGFLGPERYI 1345 (1429)
Q Consensus 1282 e~~~al~~~Le~-~G--~~~gv~v~~Ve~~k~~~G~~~~v~~----------~---gse~~ieaDlVLlAiG~~pp~~~L 1345 (1429)
++...+.+.+.+ .| +..+.++..+... ++++..+.. + ++..++++|.||+|+|..+....+
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~---~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK---GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEE---TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEec---CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHH
Confidence 444555555544 46 5567777777542 333322221 1 223689999999999976433222
Q ss_pred ----hhccC----ccccCCCCEEecC------CCCccCCCCEEEeCCCCC---C----CCcHHHHHHHHHHHHHHHHHHH
Q psy12805 1346 ----ANELD----LTLDPRSNYSTVE------KTYLTTVPRVYAAGDCRR---G----QSLVVWAISEGRQAAREIDSFL 1404 (1429)
Q Consensus 1346 ----le~lG----Leld~~G~I~VD~------~~~~TSvPgVFAAGD~a~---g----~~lvv~Ai~qGr~AA~nI~~~L 1404 (1429)
+..++ +... +| +.++. ...+|+.|++|++||++. + .+....|..+|+.+|.+|..+|
T Consensus 197 ~~~~~~~~g~~~~v~~~-~g-~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l 274 (284)
T 1rp0_A 197 GVKRLKSIGMIDHVPGM-KA-LDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKAL 274 (284)
T ss_dssp HHHHHHHTTSSSCCCCC-EE-ECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhhccCCCCcCCc-CC-chhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHh
Confidence 22222 2211 22 22221 024678899999999863 1 1245678899999999999999
Q ss_pred hCC
Q psy12805 1405 MGT 1407 (1429)
Q Consensus 1405 ~g~ 1407 (1429)
...
T Consensus 275 ~~~ 277 (284)
T 1rp0_A 275 GLP 277 (284)
T ss_dssp TCC
T ss_pred hhh
Confidence 653
No 149
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=97.45 E-value=0.00034 Score=81.51 Aligned_cols=106 Identities=15% Similarity=0.081 Sum_probs=75.8
Q ss_pred HHHHHHHHHHhCCCCeEEEEecccc---------ChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHH
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEV---------GVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVA 580 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~---------Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ 580 (1429)
+.++|+.+|+.. +.||.|||.+.. ....++..+.++|+|+|.|+.. ++...+.. ..-+..+ ..+.
T Consensus 197 ~~eiv~avr~~v-~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g--~~~~~~~~--~~~~~~~-~~~~ 270 (340)
T 3gr7_A 197 LGEVIDAVREVW-DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSG--AIVPARMN--VYPGYQV-PFAE 270 (340)
T ss_dssp HHHHHHHHHHHC-CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECC--CSSCCCCC--CCTTTTH-HHHH
T ss_pred HHHHHHHHHHhc-CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecC--CccCCCCC--CCccccH-HHHH
Confidence 678999999998 899999999741 2345788899999999999853 12111100 0111122 2223
Q ss_pred HHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 581 ETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 581 ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
++.+.+ +++|++.|||+|+.|+.+++..| ||.|++|++++.
T Consensus 271 ~ik~~~-------~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~la 312 (340)
T 3gr7_A 271 LIRREA-------DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLR 312 (340)
T ss_dssp HHHHHT-------TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHH
T ss_pred HHHHHc-------CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHh
Confidence 333332 58999999999999999999999 999999997664
No 150
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=97.42 E-value=0.0028 Score=70.74 Aligned_cols=139 Identities=14% Similarity=0.046 Sum_probs=93.0
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChH
Q psy12805 497 SPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWE 576 (1429)
Q Consensus 497 sP~~h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~ 576 (1429)
.+++..-..++..+.+..+.|++. +..|..-. +.--..|+.++++|+++|.--|..-||| .|+...
T Consensus 111 ~~d~~~llpD~~~tv~aa~~L~~~--Gf~Vlpy~---~dd~~~akrl~~~G~~aVmPlg~pIGsG---------~Gi~~~ 176 (265)
T 1wv2_A 111 LADQKTLFPNVVETLKAAEQLVKD--GFDVMVYT---SDDPIIARQLAEIGCIAVMPLAGLIGSG---------LGICNP 176 (265)
T ss_dssp BSCTTTCCBCHHHHHHHHHHHHTT--TCEEEEEE---CSCHHHHHHHHHSCCSEEEECSSSTTCC---------CCCSCH
T ss_pred ecCccccCcCHHHHHHHHHHHHHC--CCEEEEEe---CCCHHHHHHHHHhCCCEEEeCCccCCCC---------CCcCCH
Confidence 344444455777777777777655 33444222 2334568889999999997767765654 234333
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHh
Q psy12805 577 LGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRK 656 (1429)
Q Consensus 577 laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~ 656 (1429)
..|..+.+. .+++||++|||.|+.|+++|+.||||+|.+||+..-+ . ||
T Consensus 177 ~lI~~I~e~-------~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a-~-------------------dP---- 225 (265)
T 1wv2_A 177 YNLRIILEE-------AKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHA-K-------------------DP---- 225 (265)
T ss_dssp HHHHHHHHH-------CSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHTS-S-------------------SH----
T ss_pred HHHHHHHhc-------CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCC-C-------------------CH----
Confidence 444444432 2689999999999999999999999999999965421 1 22
Q ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy12805 657 KFAGKPEHVINYLFMLAEEVRTHMAKLGI 685 (1429)
Q Consensus 657 ~~~g~~e~v~ny~~~l~~eLr~iMa~mGi 685 (1429)
.....+|.+++..+=..+++..+-
T Consensus 226 -----~~ma~af~~Av~aGr~a~~ag~~~ 249 (265)
T 1wv2_A 226 -----VMMAEAMKHAIVAGRLAYLAGRMP 249 (265)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred -----HHHHHHHHHHHHHHHHHHHcCCCc
Confidence 244567777888777777766553
No 151
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=97.33 E-value=0.00091 Score=77.76 Aligned_cols=106 Identities=18% Similarity=0.014 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHhCCCCeEEEEecccc----C-----hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCCh-HHH
Q psy12805 509 DLAELIYDLKCANPNARISVKLVSEV----G-----VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPW-ELG 578 (1429)
Q Consensus 509 dL~qlI~~Lk~~~~~~pV~VKLv~e~----G-----vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~-~la 578 (1429)
-+.++|+.+|+.. +.||.||+.+.. | ...++..+.++|+|+|.|++.... . .. ...+-.+ ...
T Consensus 196 ~~~eiv~avr~~v-~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~-~-~~----~~~~~~~~~~~ 268 (338)
T 1z41_A 196 FLREIIDEVKQVW-DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALV-H-AD----INVFPGYQVSF 268 (338)
T ss_dssp HHHHHHHHHHHHC-CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSS-C-CC----CCCCTTTTHHH
T ss_pred HHHHHHHHHHHHc-CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccc-c-CC----CCCCccchHHH
Confidence 3688999999988 899999998741 1 234677788999999999875210 0 00 0011111 223
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 579 VAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 579 L~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
+.++.+.+ +++|++.|||+|+.|+.+++..| ||.|++|++++.
T Consensus 269 ~~~ir~~~-------~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~ 312 (338)
T 1z41_A 269 AEKIREQA-------DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLR 312 (338)
T ss_dssp HHHHHHHH-------CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHH
T ss_pred HHHHHHHC-------CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHh
Confidence 34454443 58999999999999999999999 999999997654
No 152
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=97.28 E-value=0.00076 Score=73.14 Aligned_cols=102 Identities=19% Similarity=0.027 Sum_probs=67.7
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
+.++++.+|+.+|+.++.+... ....+..+.++|+|+|.++.+ |.|+..... ....|....+.++.+.+
T Consensus 106 ~~~~i~~~~~~~~~~~v~~~~~----t~~e~~~~~~~G~d~i~~~~~-g~t~~~~~~---~~~~~~~~~~~~~~~~~--- 174 (223)
T 1y0e_A 106 LDELVSYIRTHAPNVEIMADIA----TVEEAKNAARLGFDYIGTTLH-GYTSYTQGQ---LLYQNDFQFLKDVLQSV--- 174 (223)
T ss_dssp HHHHHHHHHHHCTTSEEEEECS----SHHHHHHHHHTTCSEEECTTT-TSSTTSTTC---CTTHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhCCCceEEecCC----CHHHHHHHHHcCCCEEEeCCC-cCcCCCCCC---CCCcccHHHHHHHHhhC---
Confidence 4567888888777788877632 223456688999999976543 333221100 00122223333333321
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhH
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAP 626 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~ 626 (1429)
+++++++|||+|+.|+.+++.+||+.|.+|++.
T Consensus 175 ----~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al 207 (223)
T 1y0e_A 175 ----DAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAI 207 (223)
T ss_dssp ----CSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred ----CCCEEEecCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 589999999999999999999999999999863
No 153
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.26 E-value=0.00036 Score=85.70 Aligned_cols=81 Identities=12% Similarity=0.097 Sum_probs=55.1
Q ss_pred eEEEecEEEEeccccCchhhhhhccCccccCCCCEEec------CC---CCccCCCCEEEe-CCCCC--CCCcHHHHHHH
Q psy12805 1325 KIFKCDLVLLAMGFLGPERYIANELDLTLDPRSNYSTV------EK---TYLTTVPRVYAA-GDCRR--GQSLVVWAISE 1392 (1429)
Q Consensus 1325 ~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~~G~I~VD------~~---~~~TSvPgVFAA-GD~a~--g~~lvv~Ai~q 1392 (1429)
+++++|+||+|+|+.+ +..++..++|. ..+|....+ .. ..-...|++|++ |+.+. ..+.+..|..|
T Consensus 376 ~~~~~D~ii~atG~~~-~~~~~~~~~i~-g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q 453 (542)
T 1w4x_A 376 REYELDSLVLATGFDA-LTGALFKIDIR-GVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQH 453 (542)
T ss_dssp CEEECSEEEECCCCCC-TTHHHHTSEEE-CGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHH
T ss_pred eEEecCEEEEcCCccc-cccCcCceeeE-CCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHH
Confidence 5799999999999994 33455544432 223433222 11 123467999998 99853 45666889999
Q ss_pred HHHHHHHHHHHHhCC
Q psy12805 1393 GRQAAREIDSFLMGT 1407 (1429)
Q Consensus 1393 Gr~AA~nI~~~L~g~ 1407 (1429)
++.++++|.....+.
T Consensus 454 ~~~ia~~i~~~~~~~ 468 (542)
T 1w4x_A 454 VEWVTDHIAYMFKNG 468 (542)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCC
Confidence 999999998877653
No 154
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.20 E-value=0.0015 Score=76.43 Aligned_cols=108 Identities=15% Similarity=0.046 Sum_probs=75.1
Q ss_pred HHHHHHHHHHhCC-CCeEEEEecccc----C-----hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHH
Q psy12805 510 LAELIYDLKCANP-NARISVKLVSEV----G-----VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGV 579 (1429)
Q Consensus 510 L~qlI~~Lk~~~~-~~pV~VKLv~e~----G-----vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL 579 (1429)
+.++|+.+|+..+ +.||.||+.+.. | ...++..+.++|+|+|.++.. ++....... ...+.. ...+
T Consensus 205 ~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g--~~~~~~~~~-~~~~~~-~~~~ 280 (349)
T 3hgj_A 205 PLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSG--GVVLRVRIP-LAPGFQ-VPFA 280 (349)
T ss_dssp HHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECC--CSCSSSCCC-CCTTTT-HHHH
T ss_pred HHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecC--CcCcccccC-CCcccc-HHHH
Confidence 6788999999875 689999999742 1 233677788999999999952 121110000 011111 2223
Q ss_pred HHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 580 AETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 580 ~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
.++.+.+ +++|++.|||+|+.|+.+++..| ||.|++|++++.
T Consensus 281 ~~ir~~~-------~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~la 323 (349)
T 3hgj_A 281 DAVRKRV-------GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLR 323 (349)
T ss_dssp HHHHHHH-------CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred HHHHHHc-------CceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHh
Confidence 4444433 58999999999999999999999 999999997664
No 155
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.01 E-value=0.00018 Score=102.95 Aligned_cols=208 Identities=19% Similarity=0.228 Sum_probs=123.0
Q ss_pred cceeeCCCCCccchHHHHHHHHHHHHHhCCcEEecCCCC-CccccccCCCcccccceeecc-cCC-CCCChhhhccccch
Q psy12805 382 KRFATGAMSFGSISIEAHTTLAKAMNKIGAKSNTGEGGE-NPERYLSSGDENQRSAIKQVA-SGR-FGVTSSYLAHADDL 458 (1429)
Q Consensus 382 ~pf~i~aMS~GslS~ea~~aLA~aa~~~G~~~~tGEGg~-~~~~~~~~~~~~~~~~I~Q~a-sgr-fGv~~~~L~~a~~i 458 (1429)
.|++.++|..+.-+. .||.|..+.|..-..+-+|. +++.+. ..-..+++.. .++ |||+.-|+.. ...
T Consensus 428 ~PIi~a~M~~~~s~~----~LaaAVs~AGglG~l~~~g~~~~~~l~-----~~i~~~r~~~~~~~p~~vNl~~~~p-~~~ 497 (3089)
T 3zen_D 428 SPILLAGMTPTTVDA----KIVAAAANAGHWAELAGGGQVTEQIFN-----DRIAELETLLEPGRAIQFNTLFLDP-YLW 497 (3089)
T ss_dssp CSEEECCCHHHHTSH----HHHHHHHHTTCEEEECSTTCCSHHHHH-----HHHHHHHHHSCTTCCCEEEEECSCH-HHH
T ss_pred CCEEeCCCcCCcCCH----HHHHHHHhCCCceeecCCCCCCHHHHH-----HHHHHHHHhcCCCCceeechhhcCh-hhh
Confidence 699999998774333 48999999998777755555 566542 1111222222 133 7776544321 111
Q ss_pred hhhcccCCCCCCCCCcccccchHHHHhccCC-CCccccccCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccChH
Q psy12805 459 QIKMAQGAKPGEGGELPGYKVTKDIASTRHS-VPGVGLISPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGVG 537 (1429)
Q Consensus 459 eIk~gQGAKpG~GG~lpg~KV~~~iA~~r~~-~pg~~LisP~~h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg 537 (1429)
+..++. .+.+..++.. .|-..++.+. ++-++|+..+++..+|+.. -..|.+| ++..
T Consensus 498 ~~~~g~---------------~~~~~~~~~~g~~vdgv~~~a---G~P~~ee~~~~i~~l~~~G-i~~i~~~----~~t~ 554 (3089)
T 3zen_D 498 KLQVGG---------------KRLVQRARQSGAPIDGLVVSA---GIPDLEEAVDIIDELNEVG-ISHVVFK----PGTV 554 (3089)
T ss_dssp HHHHHH---------------HHHHHHHHHTTCSCCEEEEES---SCCCHHHHHHHHTSTTHHH-HCSEEEC----CCSH
T ss_pred hhccCH---------------HHHHHHHHHcCCCceEEEEeC---CCCchhHhHHHHHHHHHcC-CEEEEEe----CCCH
Confidence 122110 1222222222 2222234443 3445688888999888762 1233335 2333
Q ss_pred HHHHHHHhcCCc------EEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHH
Q psy12805 538 VVASGVAKGKAE------HIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVV 611 (1429)
Q Consensus 538 ~vA~~~akaGaD------~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~k 611 (1429)
..|..+.+.|+| +|++.|..||.+.. .......+.++...++. ..+++|++.|||.++++++.
T Consensus 555 ~~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g--------~~~~~~ll~~~~~~ir~---~~~iPViaaGGI~d~~~vaa 623 (3089)
T 3zen_D 555 EQIRSVIRIAAEVPTKPVIVHIEGGRAGGHHS--------WEDLDDLLLATYSELRS---RSNITICVGGGIGTPERSAE 623 (3089)
T ss_dssp HHHHHHHHHHTTSTTSCEEEEECCSSSSEECC--------SCCHHHHHHHHHHHHTT---CTTEEEEEESSCCCTTTTHH
T ss_pred HHHHHHHHhhhhcCCCcEEEEEeCCCcCCCCC--------cccHHHHHHHHHHHHhh---cCCCeEEEEeCCCCHHHHHH
Confidence 445567777887 88889887764221 11333333334444322 24799999999999999999
Q ss_pred HH-----------HhcchhhhcchhHHHHhccc
Q psy12805 612 AA-----------LLGADEIGLSTAPLITMGCT 633 (1429)
Q Consensus 612 Al-----------aLGAdavg~gt~~L~algc~ 633 (1429)
++ +||||.|.+||.++.+..|.
T Consensus 624 al~g~ws~~~~~p~lGAdGV~vGTrfl~t~Ea~ 656 (3089)
T 3zen_D 624 YLSGRWAEVHGYPLMPIDGILVGTAAMATLEAT 656 (3089)
T ss_dssp HHHTGGGGTTTCCCCCCSEEECSSTTTTCTTSC
T ss_pred HhccccccccCccCCCCCEEEecHHHHhCcccC
Confidence 99 99999999999998877664
No 156
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=97.00 E-value=0.0026 Score=74.75 Aligned_cols=112 Identities=13% Similarity=0.014 Sum_probs=76.9
Q ss_pred CHHH----HHHHHHHHHHhCC-CCeEEEEecccc----C------hHHHHHHHHhcCCcEEEEecCCCCCCccccccccc
Q psy12805 506 SIED----LAELIYDLKCANP-NARISVKLVSEV----G------VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKN 570 (1429)
Q Consensus 506 sied----L~qlI~~Lk~~~~-~~pV~VKLv~e~----G------vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~ 570 (1429)
|+|. +.++|+.+|+..+ +.||.||+.+.. | ...++..+.++|+|+|.+++.. +...... ...
T Consensus 203 slenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~--~~~~~~~-~~~ 279 (363)
T 3l5l_A 203 SFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGF--TIPDTNI-PWG 279 (363)
T ss_dssp SHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECC--CSSCCCC-CCC
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCc--ccccccc-CCC
Confidence 5554 6788999999875 679999998742 1 1226677889999999999742 1100000 000
Q ss_pred cCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 571 AGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 571 ~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
.+.. ...+..+.+.+ +++|++.|||+|+.++.+++..| ||.|++|++++.
T Consensus 280 ~~~~-~~~~~~ir~~~-------~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~la 330 (363)
T 3l5l_A 280 PAFM-GPIAERVRREA-------KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLA 330 (363)
T ss_dssp TTTT-HHHHHHHHHHH-------TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred cchh-HHHHHHHHHHc-------CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHh
Confidence 1111 22234444443 58999999999999999999999 999999997664
No 157
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=96.94 E-value=0.0027 Score=74.10 Aligned_cols=106 Identities=19% Similarity=0.086 Sum_probs=74.0
Q ss_pred HHHHHHHHHHhCC-CCeEEEEecccc----C-----hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHH
Q psy12805 510 LAELIYDLKCANP-NARISVKLVSEV----G-----VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGV 579 (1429)
Q Consensus 510 L~qlI~~Lk~~~~-~~pV~VKLv~e~----G-----vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL 579 (1429)
+.++|+.+|+..+ +.||.||+.+.. | ...++..+.++ +|+|.++.. ++...+. ...-|..+ ..+
T Consensus 196 ~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g--~~~~~~~--~~~~~~~~-~~~ 269 (343)
T 3kru_A 196 LIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSG--GLLNVDI--NLYPGYQV-KYA 269 (343)
T ss_dssp HHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECC--CSSCCCC--CCCTTTTH-HHH
T ss_pred HHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCC--ceEeeee--cccCceee-hHH
Confidence 6789999999986 579999999841 1 22367778889 999999732 2211110 00112222 223
Q ss_pred HHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 580 AETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 580 ~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
..+.+.+ +++|++.|||+|+.++.+++.-| ||.|++|++++.
T Consensus 270 ~~ir~~~-------~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~la 312 (343)
T 3kru_A 270 ETIKKRC-------NIKTSAVGLITTQELAEEILSNERADLVALGRELLR 312 (343)
T ss_dssp HHHHHHH-------TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHhc-------CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhc
Confidence 4444443 58999999999999999999999 999999997664
No 158
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=96.93 E-value=0.0027 Score=70.47 Aligned_cols=102 Identities=24% Similarity=0.210 Sum_probs=68.8
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccChH------HHHHHHHhcCCcEEEEe-cCCCCCCccccccccccCCChHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVGVG------VVASGVAKGKAEHIVIS-GHDGGTGASSWTGIKNAGLPWELG 578 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg------~vA~~~akaGaD~I~Is-G~~GGTgaap~~~~~~~GiP~~la 578 (1429)
+.+.+.+.|..+++..++. .+|+.-|.+.- ..+.-+.++|||+|..| |... .|++ +..
T Consensus 125 ~~~~v~~eI~~v~~a~~~~--~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf~~-ggAt------------~~d 189 (239)
T 3ngj_A 125 KYDDVEKDVKAVVDASGKA--LTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFGT-HGAT------------PED 189 (239)
T ss_dssp CHHHHHHHHHHHHHHHTTS--EEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSSS-CCCC------------HHH
T ss_pred cHHHHHHHHHHHHHHhcCC--ceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCCCC-CCCC------------HHH
Confidence 3455677777777775443 67877676531 13344678999999988 6531 1222 222
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 579 VAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 579 L~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
+....+.. ..++.|-++|||||..|+.+.+.+||+.+|.++..-
T Consensus 190 v~lmr~~v-----g~~v~VKasGGIrt~~da~~~i~aGA~riGtS~~~~ 233 (239)
T 3ngj_A 190 VKLMKDTV-----GDKALVKAAGGIRTFDDAMKMINNGASRIGASAGIA 233 (239)
T ss_dssp HHHHHHHH-----GGGSEEEEESSCCSHHHHHHHHHTTEEEEEESCHHH
T ss_pred HHHHHHhh-----CCCceEEEeCCCCCHHHHHHHHHhcccceecccHHH
Confidence 22222222 357999999999999999999999999998877543
No 159
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=96.89 E-value=0.0029 Score=74.38 Aligned_cols=101 Identities=21% Similarity=0.140 Sum_probs=73.0
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccC------------hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHH
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVG------------VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWEL 577 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~G------------vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~l 577 (1429)
+.++|+.+|+..+..||.||+.+... ...++..+.++|+|+|.+++..-. + ..+.|+.
T Consensus 214 ~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-~--------~~~~~~~- 283 (365)
T 2gou_A 214 LDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWD-D--------APDTPVS- 283 (365)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTT-B--------CCCCCHH-
T ss_pred HHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcC-C--------CCCccHH-
Confidence 67788999988753399999998421 223577788999999999974210 0 1123442
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 578 GVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 578 aL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
.+.++.+.+ +++||+.||| |+.|+.+++..| ||.|++|++++.
T Consensus 284 ~~~~i~~~~-------~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~ 327 (365)
T 2gou_A 284 FKRALREAY-------QGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFIA 327 (365)
T ss_dssp HHHHHHHHC-------CSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred HHHHHHHHC-------CCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHHh
Confidence 233444332 5899999999 999999999999 999999997664
No 160
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.84 E-value=0.002 Score=71.19 Aligned_cols=98 Identities=16% Similarity=0.031 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHh
Q psy12805 509 DLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLAL 588 (1429)
Q Consensus 509 dL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~ 588 (1429)
.+.++++.+++. +.++.+... .-..+..+.++|+|+|.+..+ |-|..+ +...|....+.++ .+
T Consensus 117 ~l~~~i~~~~~~--g~~v~~~v~----t~eea~~a~~~Gad~Ig~~~~-g~t~~~------~~~~~~~~li~~l----~~ 179 (229)
T 3q58_A 117 DIDSLLTRIRLH--GLLAMADCS----TVNEGISCHQKGIEFIGTTLS-GYTGPI------TPVEPDLAMVTQL----SH 179 (229)
T ss_dssp CHHHHHHHHHHT--TCEEEEECS----SHHHHHHHHHTTCSEEECTTT-TSSSSC------CCSSCCHHHHHHH----HT
T ss_pred HHHHHHHHHHHC--CCEEEEecC----CHHHHHHHHhCCCCEEEecCc-cCCCCC------cCCCCCHHHHHHH----HH
Confidence 456667777764 567777632 345567789999999965433 222211 1123333333332 22
Q ss_pred cCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 589 NNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 589 ~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
. ++++|+.|||.|+.|+.+++.+||++|.+|++.+
T Consensus 180 ~----~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~ 214 (229)
T 3q58_A 180 A----GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAIT 214 (229)
T ss_dssp T----TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred c----CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhc
Confidence 2 5899999999999999999999999999998544
No 161
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.81 E-value=0.0015 Score=80.51 Aligned_cols=59 Identities=10% Similarity=0.010 Sum_probs=38.8
Q ss_pred cceEEEccC--CCCCcCCccCc--------cchHHHHh-------hccCCCceEEEccccccccHHHHHHhCCCCc
Q psy12805 1209 RGFIKYSRE--TAPYRPAEKRL--------KDWDEIYA-------TQHVRKGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1209 ~gf~kiAtG--s~P~~p~~~rv--------~D~~el~~-------l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
..++.+|+| +.|..|+...+ .+...... ....+++++|||+|+++++++..++..+.+|
T Consensus 136 ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~V 211 (545)
T 3uox_A 136 CRFLISATGPLSASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKEL 211 (545)
T ss_dssp EEEEEECCCSCBC---CCCTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEE
T ss_pred eCEEEECcCCCCCCcCCCCCCccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEE
Confidence 345889999 88887743222 11111112 2335789999999999999999998888776
No 162
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=96.78 E-value=0.0026 Score=78.06 Aligned_cols=109 Identities=10% Similarity=0.004 Sum_probs=76.6
Q ss_pred HhhccCCC--C---CCC--CCC----CCc---c-cccccccccchHhHHHHHHhhhcccCCCCCCCccceeeccCCCCCc
Q psy12805 15 LLAEKCQL--E---VLG--QHE----NTR---K-CVAHNGEINTVRGNVNFMKAREGVMKSPHIPDIKQLYPVVEPNLSD 79 (1429)
Q Consensus 15 ~~~~~~~~--~---~~~--~~~----~~~---r-~~~hngeint~~gn~~~~~ar~~~~~~~~~~~~~~~~p~~~~~~sd 79 (1429)
.-|.|||| . +.+ .+| +|| + .|+|||||--.+.- |+.+ . ..-.+.||
T Consensus 38 ~~~~r~p~~~~~~~~~~~~~QP~~~~~Pf~~~~~~lv~NGeIyN~~eL------r~~L-~------------~~f~t~sD 98 (513)
T 1jgt_A 38 DTPQGERSLAATLVHAPSVAPDRAVARSLTGAPTTAVLAGEIYNRDEL------LSVL-P------------AGPAPEGD 98 (513)
T ss_dssp CCTTGGGSCEEEEEECTTSCGGGGEEEECSSSSEEEEEEEEESCHHHH------HHTS-C------------SSCCCSSH
T ss_pred ccccCCCccccceeeCCccCCCcccCCcCCCCCEEEEEEEEEeCHHHH------HHHh-C------------CCCCCCCH
Confidence 35889998 2 122 255 676 3 68999999633322 2221 1 11246789
Q ss_pred hHHHHHHHHhhCccccccCCCCCHHHHHHHHHHhhccCCCCcceEEEEEcCCeEEEecccCCCCCCcEEEEeCCEEEEEe
Q psy12805 80 SGAADCAVMTMVPEAWQNDGTMPDEKRDFYNWAACAMEPWDGPALLTFTDGRYIGAILDRNGLRPSRFYVLKDNVMVMAS 159 (1429)
Q Consensus 80 s~~~d~a~~~~~p~a~~~~~~~~~~~~~~y~~~~~~~epwdgpa~~~~~dg~~~ga~ldrnglrp~r~~~~~d~~~~~~s 159 (1429)
|.-+=++.. .| -..+++-++|..++++-|.+.+-+.-||.|.||. ||-..++.+++||
T Consensus 99 tEvil~l~~-----~~----------------g~~~~~~l~G~fA~~i~d~~~l~~aRD~~G~kPL-yy~~~~~~~~faS 156 (513)
T 1jgt_A 99 AELVLRLLE-----RY----------------DLHAFRLVNGRFATVVRTGDRVLLATDHAGSVPL-YTCVAPGEVRAST 156 (513)
T ss_dssp HHHHHHHHH-----HH----------------GGGGGGTCCEEEEEEEEETTEEEEEECTTCCSCC-EEEEETTEEEEES
T ss_pred HHHHHHHHH-----HH----------------hHHhHhhcCeeEEEEEEECCEEEEEECCCCCcee-EEEEeCCEEEEcc
Confidence 887765542 13 2346788899999999999989999999999999 7777889999999
Q ss_pred ecccc
Q psy12805 160 EVGVY 164 (1429)
Q Consensus 160 e~g~~ 164 (1429)
|.-.+
T Consensus 157 e~~aL 161 (513)
T 1jgt_A 157 EAKAL 161 (513)
T ss_dssp CHHHH
T ss_pred hHHHH
Confidence 97543
No 163
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.78 E-value=0.0027 Score=70.17 Aligned_cols=99 Identities=14% Similarity=-0.016 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+.+.++++.+++. +.++.+.. .....+..+.++|+|+|.+..+ |-|..+ +...|....+.++.
T Consensus 116 ~~l~~~i~~~~~~--g~~v~~~v----~t~eea~~a~~~Gad~Ig~~~~-g~t~~~------~~~~~~~~~i~~l~---- 178 (232)
T 3igs_A 116 VAVEALLARIHHH--HLLTMADC----SSVDDGLACQRLGADIIGTTMS-GYTTPD------TPEEPDLPLVKALH---- 178 (232)
T ss_dssp SCHHHHHHHHHHT--TCEEEEEC----CSHHHHHHHHHTTCSEEECTTT-TSSSSS------CCSSCCHHHHHHHH----
T ss_pred HHHHHHHHHHHHC--CCEEEEeC----CCHHHHHHHHhCCCCEEEEcCc-cCCCCC------CCCCCCHHHHHHHH----
Confidence 3456667777664 56777653 2345577789999999965433 222211 11223333344332
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
.. ++++|+.|||.|+.|+.+++.+||++|.+|++.+
T Consensus 179 ~~----~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~ 214 (232)
T 3igs_A 179 DA----GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAIT 214 (232)
T ss_dssp HT----TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred hc----CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhc
Confidence 22 5899999999999999999999999999998544
No 164
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=96.76 E-value=0.0051 Score=72.30 Aligned_cols=101 Identities=12% Similarity=0.038 Sum_probs=73.3
Q ss_pred HHHHHHHHHHhCCCCeEEEEecccc---C----------hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChH
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEV---G----------VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWE 576 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~---G----------vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~ 576 (1429)
+.++|+.+|+..+..||.||+.+.. + ...++..+.++|+|+|.+++..-.+ . ...|+.
T Consensus 214 ~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~--~-------~~~~~~ 284 (364)
T 1vyr_A 214 VLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAG--G-------KPYSEA 284 (364)
T ss_dssp HHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTB--C-------CCCCHH
T ss_pred HHHHHHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccC--C-------CcccHH
Confidence 6778999999986349999999852 2 1225777889999999998742111 0 112432
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 577 LGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 577 laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
.+.++.+.+ +++|++.||| |..++.+++..| ||.|++|++++.
T Consensus 285 -~~~~v~~~~-------~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 285 -FRQKVRERF-------HGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIA 328 (364)
T ss_dssp -HHHHHHHHC-------CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred -HHHHHHHHC-------CCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHh
Confidence 233444332 5899999999 899999999999 999999997664
No 165
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=96.68 E-value=0.0037 Score=73.46 Aligned_cols=95 Identities=14% Similarity=0.073 Sum_probs=72.6
Q ss_pred HHHHHHHHHHhCCCCeEEEEecccc---C---------hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHH
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEV---G---------VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWEL 577 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~---G---------vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~l 577 (1429)
+.++|+.+|+..+.-||.||+.+.. | ...++..+.++|+|+|.+++.. .+ -+.
T Consensus 206 ~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~-----------~~~-- 270 (362)
T 4ab4_A 206 LLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE--AD-----------DSI-- 270 (362)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC--CT-----------TCC--
T ss_pred HHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC--CC-----------HHH--
Confidence 6788999999876449999999752 1 1236777889999999999753 11 132
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 578 GVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 578 aL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
+..+.+.+ +++||+.||+ |+.++.+++.-| ||.|++|++++.
T Consensus 271 -~~~ik~~~-------~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~la 313 (362)
T 4ab4_A 271 -GPLIKEAF-------GGPYIVNERF-DKASANAALASGKADAVAFGVPFIA 313 (362)
T ss_dssp -HHHHHHHH-------CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred -HHHHHHHC-------CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 34444443 4789999999 999999999998 999999997765
No 166
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=96.66 E-value=0.0026 Score=78.66 Aligned_cols=113 Identities=17% Similarity=0.084 Sum_probs=76.1
Q ss_pred HHHhhccCCCCCC--CCCCCC---cc-cccccccccchHhHHHHHHhhhcccCCCCCCCccceeeccCCCCCchHHHHHH
Q psy12805 13 FRLLAEKCQLEVL--GQHENT---RK-CVAHNGEINTVRGNVNFMKAREGVMKSPHIPDIKQLYPVVEPNLSDSGAADCA 86 (1429)
Q Consensus 13 ~~~~~~~~~~~~~--~~~~~~---~r-~~~hngeint~~gn~~~~~ar~~~~~~~~~~~~~~~~p~~~~~~sds~~~d~a 86 (1429)
..+.|.|+.|.-+ |.||+- -+ .|+|||||--.+.-+.-+.++ ..-.+.|||.-+=.+
T Consensus 43 ~~lgh~Rlsi~~~~~~~QP~~~~~~~~~lv~NGeIyN~~eLr~~L~~~-----------------~~f~s~sDtEvil~l 105 (553)
T 1ct9_A 43 AILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDR-----------------YQFQTGSDCEVILAL 105 (553)
T ss_dssp EEEEEEECCCSCTTTCCSSEECTTSCEEEEEEEEETTHHHHHHHHTTT-----------------SCCCSCCTTHHHHHH
T ss_pred EEEEEEeeeeeCCCCCCCCeEeCCCCEEEEEEEEEECHHHHHHHHhcc-----------------CccCCCCcHHHHHHH
Confidence 4678999998765 777731 12 589999997444333222111 012467888766444
Q ss_pred HHhhCccccccCCCCCHHHHHHHHHHhhccCCCCcceEEEEEcC--CeEEEecccCCCCCCcEEEE-eCCEEEEEeeccc
Q psy12805 87 VMTMVPEAWQNDGTMPDEKRDFYNWAACAMEPWDGPALLTFTDG--RYIGAILDRNGLRPSRFYVL-KDNVMVMASEVGV 163 (1429)
Q Consensus 87 ~~~~~p~a~~~~~~~~~~~~~~y~~~~~~~epwdgpa~~~~~dg--~~~ga~ldrnglrp~r~~~~-~d~~~~~~se~g~ 163 (1429)
.. .| -...++-.+|+.++++.|. +.+-+.-||.|.||. ||-. +|+.+++|||.-.
T Consensus 106 ~~-----~~----------------g~~~l~~l~G~fa~~i~d~~~~~l~~aRD~~G~~PL-y~~~~~~~~~~faSe~~a 163 (553)
T 1ct9_A 106 YQ-----EK----------------GPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPL-YMGYDEHGQLYVASEMKA 163 (553)
T ss_dssp HH-----HH----------------TTTTGGGCCEEEEEEEEETTTTEEEEEECTTCCSCC-EEEECTTCCEEEESSGGG
T ss_pred HH-----HH----------------HHHHHHhCCccEEEEEEECCCCEEEEEECCCCCCCe-EEEEecCCEEEEeechHH
Confidence 32 12 1335666799999999984 778888899999999 5544 5788999999744
Q ss_pred c
Q psy12805 164 Y 164 (1429)
Q Consensus 164 ~ 164 (1429)
+
T Consensus 164 l 164 (553)
T 1ct9_A 164 L 164 (553)
T ss_dssp T
T ss_pred H
Confidence 3
No 167
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=96.66 E-value=0.004 Score=68.12 Aligned_cols=98 Identities=16% Similarity=0.130 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEE--EEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHI--VISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I--~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+.++|+.+|+..++.+|.+... ....+..+.++|+|+| .+.|...++ ....+.. ...+.++ .
T Consensus 120 ~~~~i~~i~~~~~~~~v~~~~~----t~~ea~~a~~~Gad~i~~~v~g~~~~~-------~~~~~~~-~~~i~~~----~ 183 (234)
T 1yxy_A 120 IASFIRQVKEKYPNQLLMADIS----TFDEGLVAHQAGIDFVGTTLSGYTPYS-------RQEAGPD-VALIEAL----C 183 (234)
T ss_dssp HHHHHHHHHHHCTTCEEEEECS----SHHHHHHHHHTTCSEEECTTTTSSTTS-------CCSSSCC-HHHHHHH----H
T ss_pred HHHHHHHHHHhCCCCeEEEeCC----CHHHHHHHHHcCCCEEeeeccccCCCC-------cCCCCCC-HHHHHHH----H
Confidence 4667888888777788887643 2334677889999999 666654322 1112222 2222222 2
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
.. +++|+++|||+|..|+.+++.+|||.|.+|++.+
T Consensus 184 ~~----~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~ 219 (234)
T 1yxy_A 184 KA----GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAIT 219 (234)
T ss_dssp HT----TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHH
T ss_pred hC----CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHh
Confidence 22 4899999999999999999999999999999543
No 168
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=96.65 E-value=0.004 Score=73.16 Aligned_cols=95 Identities=16% Similarity=0.089 Sum_probs=72.7
Q ss_pred HHHHHHHHHHhCCCCeEEEEecccc---C---------hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHH
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEV---G---------VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWEL 577 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~---G---------vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~l 577 (1429)
+.++|+.+|+..+.-||.||+.+.. | ...++..+.++|+|+|.+++.. ++ .+.
T Consensus 214 ~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~-----------~~~-- 278 (361)
T 3gka_A 214 LLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF--GG-----------DAI-- 278 (361)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--ST-----------TCC--
T ss_pred HHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC--CC-----------HHH--
Confidence 7789999999876449999999842 1 2236777899999999999753 11 132
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 578 GVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 578 aL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
+..+.+.+ +++||+.||+ |..++..++.-| ||.|++|++++.
T Consensus 279 -~~~ik~~~-------~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~la 321 (361)
T 3gka_A 279 -GQQLKAAF-------GGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIA 321 (361)
T ss_dssp -HHHHHHHH-------CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred -HHHHHHHc-------CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 33444443 4789999999 999999999998 999999997665
No 169
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=96.48 E-value=0.0053 Score=72.53 Aligned_cols=102 Identities=11% Similarity=-0.007 Sum_probs=71.3
Q ss_pred HHHHHHHHHHhCCCCeEEEEecccc-------C-----hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHH
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEV-------G-----VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWEL 577 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~-------G-----vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~l 577 (1429)
+.++|+.+|+..+..||.||+.+.. + ...++..+.++|+|+|.+++..-.. .+ .+-++.
T Consensus 219 ~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~--~~------~~~~~~- 289 (377)
T 2r14_A 219 PLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIG--GD------ITYPEG- 289 (377)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--------------CCCTT-
T ss_pred HHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccC--CC------CcchHH-
Confidence 6778899998875349999998742 1 2336777889999999998742110 00 011222
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 578 GVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 578 aL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
.+.++.+.+ +++|++.||| ++.++.+++.-| ||+|++|++++.
T Consensus 290 ~~~~ik~~~-------~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~ 333 (377)
T 2r14_A 290 FREQMRQRF-------KGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIA 333 (377)
T ss_dssp HHHHHHHHC-------CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHC-------CCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHh
Confidence 233344332 5899999999 699999999998 999999997665
No 170
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=96.42 E-value=0.021 Score=63.89 Aligned_cols=131 Identities=14% Similarity=0.046 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQV 585 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~ 585 (1429)
++..+.+..+.|.+. +..|.-... .++ .+|+.++++|+++|.--+..-|||. |+.....|..+.+.
T Consensus 109 D~~~tv~aa~~L~k~--Gf~Vlpy~~--~D~-~~ak~l~~~G~~aVmPlg~pIGsG~---------Gi~~~~~L~~i~~~ 174 (268)
T 2htm_A 109 DPLETLKAAERLIEE--DFLVLPYMG--PDL-VLAKRLAALGTATVMPLAAPIGSGW---------GVRTRALLELFARE 174 (268)
T ss_dssp CHHHHHHHHHHHHHT--TCEECCEEC--SCH-HHHHHHHHHTCSCBEEBSSSTTTCC---------CSTTHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHC--CCEEeeccC--CCH-HHHHHHHhcCCCEEEecCccCcCCc---------ccCCHHHHHHHHHh
Confidence 455555555555443 222221111 133 6788899999999965576656532 34443334443321
Q ss_pred HHhcCCCCc-eEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCcHHH
Q psy12805 586 LALNNLRSR-VVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEH 664 (1429)
Q Consensus 586 L~~~gLR~~-V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~ 664 (1429)
+ .+ ++||++|||.|+.|++.|+.||||+|.+||+..-+ .|| ...
T Consensus 175 ---~---~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~a--------------------~dP---------~~m 219 (268)
T 2htm_A 175 ---K---ASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAEA--------------------QDP---------PAM 219 (268)
T ss_dssp ---T---TTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHTS--------------------SSH---------HHH
T ss_pred ---c---CCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCC--------------------CCH---------HHH
Confidence 2 25 89999999999999999999999999999965431 122 244
Q ss_pred HHHHHHHHHHHHHHHHHhcCC
Q psy12805 665 VINYLFMLAEEVRTHMAKLGI 685 (1429)
Q Consensus 665 v~ny~~~l~~eLr~iMa~mGi 685 (1429)
..+|.+++..+=..+++..+-
T Consensus 220 a~af~~Av~agr~a~~ag~~~ 240 (268)
T 2htm_A 220 AEAFRLAVEAGRKAYLAGPMR 240 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCc
Confidence 567788888888777776554
No 171
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=96.36 E-value=0.013 Score=66.50 Aligned_cols=106 Identities=25% Similarity=0.230 Sum_probs=71.0
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccChH------HHHHHHHhcCCcEEEEe-cCCCCCCccccccccccCCChHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVGVG------VVASGVAKGKAEHIVIS-GHDGGTGASSWTGIKNAGLPWELG 578 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg------~vA~~~akaGaD~I~Is-G~~GGTgaap~~~~~~~GiP~~la 578 (1429)
..+.+.+.|..+++..+. + .+|+.-|.+.- ..+..+.++|||+|.-| |.. ..|+. ++-
T Consensus 156 ~~~~v~~eI~~V~~a~~~-~-~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~-~~GAT---------~ed--- 220 (288)
T 3oa3_A 156 RYTDVFQDIRAVRLAAKD-A-ILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFN-GPGAS---------IEN--- 220 (288)
T ss_dssp CHHHHHHHHHHHHHHTTT-S-EEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSS-SCCCC---------HHH---
T ss_pred cHHHHHHHHHHHHHHhcC-C-CceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCC-CCCCC---------HHH---
Confidence 456788888888888644 4 58888776421 13445778999999876 332 11222 222
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 579 VAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 579 L~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
+....+.....+ .++.|.++|||||..|+.+++.+||+.+|.+...-+
T Consensus 221 v~lmr~~v~~~g--~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~g~~I 268 (288)
T 3oa3_A 221 VSLMSAVCDSLQ--SETRVKASGGIRTIEDCVKMVRAGAERLGASAGVKI 268 (288)
T ss_dssp HHHHHHHHHHSS--SCCEEEEESSCCSHHHHHHHHHTTCSEEEESCHHHH
T ss_pred HHHHHHHHHHhC--CCceEEEeCCCCCHHHHHHHHHcCCceeehhhHHHH
Confidence 222223222222 479999999999999999999999999888775443
No 172
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=96.33 E-value=0.01 Score=70.65 Aligned_cols=110 Identities=10% Similarity=-0.001 Sum_probs=71.9
Q ss_pred HHHHHHHHHHhCCCCeEEEEecccc------C------hHHHHHHHHhcC------CcEEEEecCCCCCC-ccccccccc
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEV------G------VGVVASGVAKGK------AEHIVISGHDGGTG-ASSWTGIKN 570 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~------G------vg~vA~~~akaG------aD~I~IsG~~GGTg-aap~~~~~~ 570 (1429)
+.++|+.+|+..+..||.||+.+.. + ...++..+.++| +|+|.|++..-... ..|.....
T Consensus 224 ~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~- 302 (402)
T 2hsa_B 224 ITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLG- 302 (402)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTT-
T ss_pred HHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCcccccc-
Confidence 7788999999886459999998752 1 234677788899 99999987421100 00100000
Q ss_pred cCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 571 AGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 571 ~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
-+......+.++.+. -+++||+.||| |+.|+.+++.-| ||+|++|++++.
T Consensus 303 ~~~~~~~~~~~vk~~-------~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~ 353 (402)
T 2hsa_B 303 SEEEEARLMRTLRNA-------YQGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFIS 353 (402)
T ss_dssp HHHHHHHHHHHHHHH-------CSSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred CCcchHHHHHHHHHH-------CCCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHh
Confidence 010011112222222 15799999999 999999999998 999999997765
No 173
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=96.31 E-value=0.0075 Score=71.30 Aligned_cols=100 Identities=8% Similarity=-0.053 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHhCCCCeEEEEecccc-------C-----hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChH
Q psy12805 509 DLAELIYDLKCANPNARISVKLVSEV-------G-----VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWE 576 (1429)
Q Consensus 509 dL~qlI~~Lk~~~~~~pV~VKLv~e~-------G-----vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~ 576 (1429)
-+.++|+.+|+..+..||.||+.+.. + ...++..+.++|+|+|.+++..- .+ .+.|.
T Consensus 229 ~~~eiv~aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~----~~------~~~~~- 297 (379)
T 3aty_A 229 LIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDM----VN------QQIGD- 297 (379)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCT----TS------CCCCC-
T ss_pred HHHHHHHHHHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCc----CC------CCccH-
Confidence 37788899999876558999999842 1 22366778889999999997421 11 11343
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 577 LGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 577 laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
. +.++.+. .+++|++.||| |..|+..++.-| ||.|++|++++.
T Consensus 298 ~-~~~ir~~-------~~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 298 V-VAWVRGS-------YSGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp H-HHHHHTT-------CCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred H-HHHHHHH-------CCCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHh
Confidence 1 3333221 25899999999 999999999998 999999997665
No 174
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=96.28 E-value=0.018 Score=63.61 Aligned_cols=102 Identities=23% Similarity=0.241 Sum_probs=70.2
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccChH----H------HHHHHHhcCCcEEEEe-cCCCCCCccccccccccCCC
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVGVG----V------VASGVAKGKAEHIVIS-GHDGGTGASSWTGIKNAGLP 574 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg----~------vA~~~akaGaD~I~Is-G~~GGTgaap~~~~~~~GiP 574 (1429)
..+.+.+.|..+++..++. .+|+.-|.+.- + .+.-+.++|||+|.-| |.....|+
T Consensus 110 ~~~~v~~ei~~v~~a~~~~--~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~~~~gA------------ 175 (231)
T 3ndo_A 110 DLDAVSADITAVRKAVRAA--TLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFHPSGGA------------ 175 (231)
T ss_dssp CHHHHHHHHHHHHHHTTTS--EEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCCTTCSC------------
T ss_pred cHHHHHHHHHHHHHHccCC--ceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCCCCCCC------------
Confidence 4566778888888887544 56888776544 2 2344678999999976 33201122
Q ss_pred hHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhH
Q psy12805 575 WELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAP 626 (1429)
Q Consensus 575 ~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~ 626 (1429)
++..+....+.. +.++.|-++|||||..|+...+.+||+-+|.+...
T Consensus 176 t~edv~lm~~~v-----~~~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS~g~ 222 (231)
T 3ndo_A 176 SVQAVEIMARTV-----GERLGVKASGGIRTAEQAAAMLDAGATRLGLSGSR 222 (231)
T ss_dssp CHHHHHHHHHHH-----TTTSEEEEESSCCSHHHHHHHHHTTCSEEEESSHH
T ss_pred CHHHHHHHHHHh-----CCCceEEEeCCCCCHHHHHHHHHhcchhcccchHH
Confidence 233333333332 36899999999999999999999999988877644
No 175
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=96.28 E-value=0.024 Score=63.56 Aligned_cols=103 Identities=24% Similarity=0.144 Sum_probs=69.3
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccCh------HHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVGV------GVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGV 579 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gv------g~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL 579 (1429)
..+.+.+.|..++++.+++ .+|+.-|.+. ...+.-+.++|||+|.-|-..+..|| ++..+
T Consensus 141 ~~~~v~~eI~~v~~a~~~~--~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~~GA------------T~edV 206 (260)
T 3r12_A 141 EWEYVYEDIRSVVESVKGK--VVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTGFGTGGA------------TAEDV 206 (260)
T ss_dssp CHHHHHHHHHHHHHHTTTS--EEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSSCCC------------CHHHH
T ss_pred cHHHHHHHHHHHHHhcCCC--cEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCCCCCCCC------------CHHHH
Confidence 4566777888888886544 4687777642 12334477899999997721122222 22223
Q ss_pred HHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 580 AETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 580 ~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
....+.. ..++.|-++|||||..|+...+.+||+-+|.+...-
T Consensus 207 ~lm~~~v-----g~~v~VKaAGGIrt~~~al~mi~aGA~RiGtS~g~~ 249 (260)
T 3r12_A 207 HLMKWIV-----GDEMGVKASGGIRTFEDAVKMIMYGADRIGTSSGVK 249 (260)
T ss_dssp HHHHHHH-----CTTSEEEEESSCCSHHHHHHHHHTTCSEEEESCHHH
T ss_pred HHHHHHh-----CCCceEEEeCCCCCHHHHHHHHHcCCceeecchHHH
Confidence 3222322 468999999999999999999999999988777443
No 176
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=96.28 E-value=0.011 Score=70.78 Aligned_cols=109 Identities=18% Similarity=0.150 Sum_probs=73.5
Q ss_pred HHHHHHHHHHhC-----CCCeEEEEecccc------C-----hHHHHHHHHh-cCCcEEEEecCCCCC--Cccccccccc
Q psy12805 510 LAELIYDLKCAN-----PNARISVKLVSEV------G-----VGVVASGVAK-GKAEHIVISGHDGGT--GASSWTGIKN 570 (1429)
Q Consensus 510 L~qlI~~Lk~~~-----~~~pV~VKLv~e~------G-----vg~vA~~~ak-aGaD~I~IsG~~GGT--gaap~~~~~~ 570 (1429)
+.++|+.+|+.. ++.||.||+.++. | ...++..+.+ +|+|+|.|++..... ...+. .-..
T Consensus 224 ~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~-~g~~ 302 (419)
T 3l5a_A 224 CLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRT-PGDH 302 (419)
T ss_dssp HHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCC-SSTT
T ss_pred HHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCC-CCcc
Confidence 677888888765 3679999998842 2 1236777888 999999999764210 00000 0000
Q ss_pred cCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 571 AGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 571 ~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
...+. +..+.+.+ ..+++||+.|||+|+.++.+++.. ||.|++|++++.
T Consensus 303 ~~~~~---a~~Ik~~v-----~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~Ia 351 (419)
T 3l5a_A 303 FGRPV---NQIVYEHL-----AGRIPLIASGGINSPESALDALQH-ADMVGMSSPFVT 351 (419)
T ss_dssp TTSBH---HHHHHHHH-----TTSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHH
T ss_pred ccHHH---HHHHHHHc-----CCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHH
Confidence 11222 23333333 236899999999999999999999 999999997765
No 177
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=96.25 E-value=0.0055 Score=72.34 Aligned_cols=103 Identities=11% Similarity=-0.002 Sum_probs=71.3
Q ss_pred HHHHHHHHHHhCCCCeEEEEecccc-------C-----hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHH
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEV-------G-----VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWEL 577 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~-------G-----vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~l 577 (1429)
+.++|+.+|+..+..||.||+.+.. + ...++..+.++|+|+|.+++..-.. ..+ .... .++
T Consensus 220 ~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~-~~~--~~~~--~~~-- 292 (376)
T 1icp_A 220 ALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKT-AWE--KIEC--TES-- 292 (376)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC---------C--CCC--
T ss_pred HHHHHHHHHHHhcCCceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccC-CCC--cccc--HHH--
Confidence 7788999999876349999998642 1 2346777889999999998642110 000 0011 122
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 578 GVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 578 aL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
+.++.+.+ +++|++.||| +..|+.+++.-| ||.|++|++++.
T Consensus 293 -~~~vr~~~-------~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~ 335 (376)
T 1icp_A 293 -LVPMRKAY-------KGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFIS 335 (376)
T ss_dssp -SHHHHHHC-------CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred -HHHHHHHc-------CCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHh
Confidence 23333332 5799999999 899999999998 999999997664
No 178
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=96.06 E-value=0.063 Score=60.32 Aligned_cols=102 Identities=22% Similarity=0.140 Sum_probs=66.9
Q ss_pred HHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcc
Q psy12805 538 VVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGA 617 (1429)
Q Consensus 538 ~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGA 617 (1429)
..+..+.++|+|+|...+..-|++ .++.....+.++.+. .++++++.|||+|+.|+..++.+||
T Consensus 138 ~~a~~~~~~gad~v~~~~~~~Gt~---------~~~~~~~~l~~i~~~-------~~iPviv~gGI~t~eda~~~~~~GA 201 (264)
T 1xm3_A 138 VLARKLEELGVHAIMPGASPIGSG---------QGILNPLNLSFIIEQ-------AKVPVIVDAGIGSPKDAAYAMELGA 201 (264)
T ss_dssp HHHHHHHHHTCSCBEECSSSTTCC---------CCCSCHHHHHHHHHH-------CSSCBEEESCCCSHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCEEEECCcccCCC---------CCCCCHHHHHHHHhc-------CCCCEEEEeCCCCHHHHHHHHHcCC
Confidence 356778889999994424332221 122223344544432 2689999999999999999999999
Q ss_pred hhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcC
Q psy12805 618 DEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLG 684 (1429)
Q Consensus 618 davg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mG 684 (1429)
|+|-+|++.+-+. || .+.+.+|.+.+.++....++...
T Consensus 202 dgViVGSAi~~a~--------------------dp---------~~~~~~l~~~v~~~~~~~~~~~~ 239 (264)
T 1xm3_A 202 DGVLLNTAVSGAD--------------------DP---------VKMARAMKLAVEAGRLSYEAGRI 239 (264)
T ss_dssp SEEEESHHHHTSS--------------------SH---------HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEcHHHhCCC--------------------CH---------HHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999644211 11 25666777777776666655544
No 179
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.02 E-value=0.013 Score=72.22 Aligned_cols=57 Identities=12% Similarity=0.118 Sum_probs=41.0
Q ss_pred cceEEEccC--CCCCcCCccCcc----------chH-HHHhhccCCCceEEEccccccccHHHHHHhCCCCc
Q psy12805 1209 RGFIKYSRE--TAPYRPAEKRLK----------DWD-EIYATQHVRKGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1209 ~gf~kiAtG--s~P~~p~~~rv~----------D~~-el~~l~~~pk~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
..++.+|+| +.|..|+...+. +|. +. ....+++++|||+|+++++++..++..+.+|
T Consensus 148 ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~--~~~~~krV~VIG~G~sgve~a~~l~~~~~~V 217 (549)
T 4ap3_A 148 ARFLVVAAGPLSNANTPAFDGLDRFTGDIVHTARWPHDG--VDFTGKRVGVIGTGSSGIQSIPIIAEQAEQL 217 (549)
T ss_dssp EEEEEECCCSEEECCCCCCTTGGGCCSEEEEGGGCCTTC--CCCBTCEEEEECCSHHHHHHHHHHHHHBSEE
T ss_pred eCEEEECcCCCCCCCCCCCCCcccCCCceEEeccccccc--cccCCCEEEEECCCchHHHHHHHHHhhCCEE
Confidence 345889999 888877432221 121 11 2235789999999999999999999888887
No 180
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=95.92 E-value=0.00016 Score=82.52 Aligned_cols=136 Identities=12% Similarity=-0.027 Sum_probs=75.6
Q ss_pred CCCceEEEccccccccHHHHHHhCCCCccccccccchhhccchHHHHHHHHHHhCCCCCCcEEEEEEEeecCCCceEEEE
Q psy12805 1240 VRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHNNWSEALNQLLQTNNFPAGIKTVKVEWTKDATGRWKMDE 1319 (1429)
Q Consensus 1240 ~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~e~~~al~~~Le~~G~~~gv~v~~Ve~~k~~~G~~~~v~ 1319 (1429)
..+++.++|+|..+++.+......+.++....+...... .......... .++. ...++. ..
T Consensus 182 ~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~--------------~~~~~~~~~~-~~~~-~g~~~~---~~ 242 (326)
T 3fpz_A 182 GEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDG--------------TRDLSQKHGV-ILST-TGHDGP---FG 242 (326)
T ss_dssp SSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTS--------------SBCTTSCCCE-EEEC-CCSCSS---SC
T ss_pred CCCEEEEEccCceeeehhhhhhhccCcEEEEeecccccc--------------cccceeecce-EEEE-ecceee---Ee
Confidence 356799999999988877666555666543332221100 0001111111 1111 011111 01
Q ss_pred eCCCeeEEEecEEEEeccccCchhhhhhccCccccCCCCEEecCCCCccCCCCEEEeCCCCC--------CCCcHHHHHH
Q psy12805 1320 VPNSEKIFKCDLVLLAMGFLGPERYIANELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRR--------GQSLVVWAIS 1391 (1429)
Q Consensus 1320 ~~gse~~ieaDlVLlAiG~~pp~~~Lle~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~--------g~~lvv~Ai~ 1391 (1429)
.......+++|.++.+.|+.+... ++.+ +.|.++. .++||+|||||+||++. +| ....++.
T Consensus 243 ~~~~~~~~~~~~~~~~~g~~~~~~--------~~~e-~~iv~~~-~~~t~vpGv~aaGDaa~~v~g~~rmGp-~~g~mi~ 311 (326)
T 3fpz_A 243 AFCAKRIVDIDQNQKLGGMKGLDM--------NHAE-HDVVIHS-GAYAGVDNMYFAGMEVAELDGLNRMGP-TFGAMAL 311 (326)
T ss_dssp SHHHHHHHHHCTTCCCCCCCCBCH--------HHHH-HHHHHHC-EECTTSBTEEECTHHHHHHHTCCBCCS-CCHHHHH
T ss_pred ecceeEEEecCceeeecceecccc--------cccC-CeEEECC-CeEECCCCEEEEchHhccccCCCcCch-HHHHHHH
Confidence 111223456677777777764222 2222 3455665 78999999999999863 22 3445678
Q ss_pred HHHHHHHHHHHHHh
Q psy12805 1392 EGRQAAREIDSFLM 1405 (1429)
Q Consensus 1392 qGr~AA~nI~~~L~ 1405 (1429)
.|+.||+.|+++|.
T Consensus 312 SG~~AAe~I~~~la 325 (326)
T 3fpz_A 312 SGVHAAEQILKHFA 325 (326)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 89999999999985
No 181
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.85 E-value=0.014 Score=73.53 Aligned_cols=109 Identities=12% Similarity=-0.040 Sum_probs=73.3
Q ss_pred HHHHHHHHHHhCC-CCeEEEEecccc----C-----hHHHHHHHHhcCCcEEEEecCCCCCCccccc-cccccCCCh-HH
Q psy12805 510 LAELIYDLKCANP-NARISVKLVSEV----G-----VGVVASGVAKGKAEHIVISGHDGGTGASSWT-GIKNAGLPW-EL 577 (1429)
Q Consensus 510 L~qlI~~Lk~~~~-~~pV~VKLv~e~----G-----vg~vA~~~akaGaD~I~IsG~~GGTgaap~~-~~~~~GiP~-~l 577 (1429)
+.++|+.+|+..+ +.||.||+.+.. | ...++..+.++|+|+|.+++.. ...+.. .....+.+. ..
T Consensus 194 ~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~---~~~~~~~~~~~~~~~~~~~ 270 (671)
T 1ps9_A 194 AVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGW---HEARIPTIATPVPRGAFSW 270 (671)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECB---TTCSSCSSSTTSCTTTTHH
T ss_pred HHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCc---cccccccccccCCcchHHH
Confidence 7888899998864 789999999742 2 2236777889999999998631 111100 001111111 11
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 578 GVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 578 aL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
.+.++. . ..+++|++.|||.|+.++.+++.-| ||.|++|++++.
T Consensus 271 ~~~~i~-----~--~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~ 315 (671)
T 1ps9_A 271 VTRKLK-----G--HVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLA 315 (671)
T ss_dssp HHHHHT-----T--SCSSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred HHHHHH-----H--hcCceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHh
Confidence 222221 1 1268999999999999999999999 999999997664
No 182
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=95.75 E-value=0.0026 Score=72.79 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=30.7
Q ss_pred ceEEE--EcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 594 RVVLQ--ADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 594 ~V~Li--asGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
+++++ ++|||+|+.|+.+++.+||+.|.+|++.+.
T Consensus 207 ~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~ 243 (305)
T 2nv1_A 207 KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFK 243 (305)
T ss_dssp SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGG
T ss_pred CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHc
Confidence 46666 999999999999999999999999996553
No 183
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=95.61 E-value=0.011 Score=67.05 Aligned_cols=69 Identities=19% Similarity=0.222 Sum_probs=49.9
Q ss_pred ceEEE--EcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCcHHHHHHHHHH
Q psy12805 594 RVVLQ--ADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEHVINYLFM 671 (1429)
Q Consensus 594 ~V~Li--asGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~~~ 671 (1429)
.++++ ++|||+|..|+.+++.+||+.|.+|++.+-+ ..+ ...++.
T Consensus 207 ~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~------------------------------~dp---~~~~~~ 253 (297)
T 2zbt_A 207 RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKS------------------------------GDP---RKRARA 253 (297)
T ss_dssp SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGS------------------------------SCH---HHHHHH
T ss_pred CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCC------------------------------CCH---HHHHHH
Confidence 35666 9999999999999999999999999965431 112 123445
Q ss_pred HHHHHHHHHHhcCCCChhhhcCCC
Q psy12805 672 LAEEVRTHMAKLGIRKFADLVGRT 695 (1429)
Q Consensus 672 l~~eLr~iMa~mGi~sl~ElvGrs 695 (1429)
+.+.+++++..-++.+++|++|..
T Consensus 254 l~~~i~~~~~~~~~~~~~~~~g~~ 277 (297)
T 2zbt_A 254 IVRAVAHYNDPEVLAEVSEDLGEP 277 (297)
T ss_dssp HHHHHHTTTCHHHHHHHHTTCCCC
T ss_pred HHHHHHHHhchHhhhHHHHhcCce
Confidence 555666667667777788887754
No 184
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.59 E-value=0.11 Score=63.36 Aligned_cols=76 Identities=13% Similarity=0.204 Sum_probs=46.8
Q ss_pred CeeEEEecEEEEeccccCchhhh-hhcc-CccccCCCCEEecCCC-Ccc------CCCCEEEeCCCCC-----CCCcHHH
Q psy12805 1323 SEKIFKCDLVLLAMGFLGPERYI-ANEL-DLTLDPRSNYSTVEKT-YLT------TVPRVYAAGDCRR-----GQSLVVW 1388 (1429)
Q Consensus 1323 se~~ieaDlVLlAiG~~pp~~~L-le~l-GLeld~~G~I~VD~~~-~~T------SvPgVFAAGD~a~-----g~~lvv~ 1388 (1429)
+.+++++|.||+|||+++....+ +..+ -+..|..|...|+.++ ..+ ..++||+-|-+.. .+.+-..
T Consensus 392 dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls~~ 471 (501)
T 4b63_A 392 VKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHGLSDSLLSVL 471 (501)
T ss_dssp CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHCTTTTSSTTH
T ss_pred CCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCCcchhhHHHH
Confidence 34579999999999999654332 2222 3455667777776522 122 3477999984421 2445566
Q ss_pred HHHHHHHHHH
Q psy12805 1389 AISEGRQAAR 1398 (1429)
Q Consensus 1389 Ai~qGr~AA~ 1398 (1429)
|.+.|+++..
T Consensus 472 a~R~~~I~~~ 481 (501)
T 4b63_A 472 AVRGGEMVQS 481 (501)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777765543
No 185
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=95.44 E-value=0.07 Score=58.57 Aligned_cols=99 Identities=25% Similarity=0.332 Sum_probs=66.2
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccC------hHHHHHHHHhcCCcEEEEe-cCCCCCCccccccccccCCChHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVG------VGVVASGVAKGKAEHIVIS-GHDGGTGASSWTGIKNAGLPWELG 578 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~G------vg~vA~~~akaGaD~I~Is-G~~GGTgaap~~~~~~~GiP~~la 578 (1429)
..+.+.+.|..+++..++ + .+|+..|.+ +...++-+.++|||+|..| |... .|+ ++..
T Consensus 101 ~~~~v~~ei~~v~~a~~~-~-~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTGf~~-~ga------------t~~d 165 (220)
T 1ub3_A 101 DLDYLEAEVRAVREAVPQ-A-VLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTGFGP-RGA------------SLED 165 (220)
T ss_dssp CHHHHHHHHHHHHHHSTT-S-EEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSSS-CCC------------CHHH
T ss_pred CHHHHHHHHHHHHHHHcC-C-CceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCCCCC-CCC------------CHHH
Confidence 346677777788877643 2 778665543 2224455788999999977 4431 122 2223
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcch
Q psy12805 579 VAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLST 624 (1429)
Q Consensus 579 L~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt 624 (1429)
+....+.. ..+++|-++||+||..|+...+.+||+-+|.+.
T Consensus 166 v~~m~~~v-----g~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~ 206 (220)
T 1ub3_A 166 VALLVRVA-----QGRAQVKAAGGIRDRETALRMLKAGASRLGTSS 206 (220)
T ss_dssp HHHHHHHH-----TTSSEEEEESSCCSHHHHHHHHHTTCSEEEETT
T ss_pred HHHHHHhh-----CCCCeEEEECCCCCHHHHHHHHHCCCcccchhH
Confidence 33333322 257999999999999999999999999777666
No 186
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.44 E-value=0.0016 Score=78.75 Aligned_cols=176 Identities=10% Similarity=0.025 Sum_probs=97.1
Q ss_pred ceEEEccCCCCCcCCc---cCccchHHHH----------hhccCC--CceEEEccccccccHHHHHHhCCCCc-----cc
Q psy12805 1210 GFIKYSRETAPYRPAE---KRLKDWDEIY----------ATQHVR--KGLRIQAARCMECGVPFCQSSHGCPL-----GN 1269 (1429)
Q Consensus 1210 gf~kiAtGs~P~~p~~---~rv~D~~el~----------~l~~~p--k~lvVIGaGcIgcE~a~c~s~~Gc~V-----~~ 1269 (1429)
..+.+|||..+..+.. ....+.+.+. ++...+ ...+++|++ +++++...+..|..+ .+
T Consensus 166 ~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~v~~~g~r 243 (472)
T 2e5v_A 166 DKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQIINENGER 243 (472)
T ss_dssp SEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHHTTCEEEETTCCC
T ss_pred eeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcCCceEEECCCCCC
Confidence 4588999987755421 2234555432 111111 123345665 777777777677666 45
Q ss_pred cccccchh---hccchHHHHHHHHHHhCCCCCCcEEEEEEEeecCCCceEEEEeCCCeeEEE-ecEEEEeccccCchhhh
Q psy12805 1270 IIPKWNDL---IYHNNWSEALNQLLQTNNFPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFK-CDLVLLAMGFLGPERYI 1345 (1429)
Q Consensus 1270 iLp~~d~l---vf~~e~~~al~~~Le~~G~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ie-aDlVLlAiG~~pp~~~L 1345 (1429)
+++.+++. ...+.+...+.+.+++.+. +...... ++.-.+.++ .|.++++.|..|+ .+
T Consensus 244 f~~~~~~~~el~~rd~v~~~i~~~~~~~~~--------v~ld~~~--------~~~~~~~~~~~~~~~~~~G~dp~--~~ 305 (472)
T 2e5v_A 244 FLFNYDKRGELAPRDILSRAIYIEMLKGHK--------VFIDLSK--------IEDFERKFPVVAKYLARHGHNYK--VK 305 (472)
T ss_dssp GGGGTCTTGGGSCHHHHHHHHHHHHHHTCC--------EEEECTT--------CTTHHHHCHHHHHHHHHTTCCTT--SC
T ss_pred CCccCCcccCcCchhHHHHHHHHHHHhCCc--------EEEeccc--------hHHHHHHhHHHHHHHHHhCcCcc--cc
Confidence 66655432 1112245666666655441 1111000 000011233 4778888999854 44
Q ss_pred hhccCccccCCCCEEecCCCCccCCCCEEEeCCCCC-CC----CcHHHHHHHHHHHHHHHHHHHhC
Q psy12805 1346 ANELDLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRR-GQ----SLVVWAISEGRQAAREIDSFLMG 1406 (1429)
Q Consensus 1346 le~lGLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~-g~----~lvv~Ai~qGr~AA~nI~~~L~g 1406 (1429)
++-........|.|.||+ .++|++|||||||||+. +. .+...|..+|.+.++.+...+.+
T Consensus 306 i~v~p~~~~~~GGI~vd~-~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 306 IPIFPAAHFVDGGIRVNI-RGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp EECEEEEEEESCEEECCT-TCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred eEeehhhceeCCCeEECC-CCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 332222223357899997 89999999999999976 33 56666666655555555444443
No 187
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=95.35 E-value=0.12 Score=58.44 Aligned_cols=122 Identities=15% Similarity=0.088 Sum_probs=70.8
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccc----cChHHHHHHHHhcCCcEEEEecCCCCC-----------C------ccc
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSE----VGVGVVASGVAKGKAEHIVISGHDGGT-----------G------ASS 564 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e----~Gvg~vA~~~akaGaD~I~IsG~~GGT-----------g------aap 564 (1429)
+.+++.++++++|+.+.+.||.+-.-.+ .|+...+..++++|+|.+++-+-.-.. | .+|
T Consensus 78 ~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP 157 (267)
T 3vnd_A 78 TSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPP 157 (267)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECT
T ss_pred CHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECC
Confidence 5567777888888764577877753222 266667777788888876654221000 0 001
Q ss_pred ccccc--------------------ccCCCh--HHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 565 WTGIK--------------------NAGLPW--ELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 565 ~~~~~--------------------~~GiP~--~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
.++.+ -.|... ...+.+..+.+++. .+++|++.|||+|+.++.+++..|||.|=+
T Consensus 158 ~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~---~~~pv~vGfGI~~~e~~~~~~~~gADgvVV 234 (267)
T 3vnd_A 158 NADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEF---NAPPPLLGFGIAEPEQVRAAIKAGAAGAIS 234 (267)
T ss_dssp TCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTT---TCCCEEECSSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHh---cCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 00000 012111 01122222233222 368999999999999999999999999999
Q ss_pred chhHHHHh
Q psy12805 623 STAPLITM 630 (1429)
Q Consensus 623 gt~~L~al 630 (1429)
|++..-.+
T Consensus 235 GSaiv~~i 242 (267)
T 3vnd_A 235 GSAVVKII 242 (267)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99766544
No 188
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=95.22 E-value=0.016 Score=66.32 Aligned_cols=104 Identities=20% Similarity=0.151 Sum_probs=63.7
Q ss_pred HHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCc-------c--------cccccc---------
Q psy12805 514 IYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGA-------S--------SWTGIK--------- 569 (1429)
Q Consensus 514 I~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTga-------a--------p~~~~~--------- 569 (1429)
++.+++..++.++.+-.. ... .+..+.++|+|+|.+.|+ +|||. . .+.+++
T Consensus 116 i~~i~~~~~g~~vvv~v~---~~~-Ea~~a~~~Gad~I~v~g~-~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~ 190 (297)
T 4adt_A 116 YNHINKHKFKTPFVCGCT---NLG-EALRRISEGASMIRTKGE-AGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAK 190 (297)
T ss_dssp SCCCCGGGCSSCEEEEES---SHH-HHHHHHHHTCSEEEECCC-TTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHH
T ss_pred HHHHHhcCCCCeEEEEeC---CHH-HHHHHHhCCCCEEEECCC-cCCCchHHHHHHHHHhhhhhhhhccccccccccccc
Confidence 344444334567766421 222 356677899999999988 66762 0 111111
Q ss_pred ccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 570 NAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 570 ~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
..+.+ ...+.++.+. .+-.+.+++.|||.|+.|+.+++.+||++|.+|++.+-
T Consensus 191 ~~~~~-~~ll~~i~~~-----~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~ 243 (297)
T 4adt_A 191 KLRAP-IDLILLTRKL-----KRLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFE 243 (297)
T ss_dssp HHTCC-HHHHHHHHHH-----TSCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHT
T ss_pred cCCCC-HHHHHHHHHh-----cCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHc
Confidence 11333 2333444332 12234445999999999999999999999999996654
No 189
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1
Probab=95.20 E-value=0.0054 Score=68.76 Aligned_cols=123 Identities=21% Similarity=0.195 Sum_probs=73.4
Q ss_pred HHhhccCCCCCCC----CCCCCc------ccccccccccchHhHHHHHHhhhcccCCCCCCCccceeeccCCCCCchHHH
Q psy12805 14 RLLAEKCQLEVLG----QHENTR------KCVAHNGEINTVRGNVNFMKAREGVMKSPHIPDIKQLYPVVEPNLSDSGAA 83 (1429)
Q Consensus 14 ~~~~~~~~~~~~~----~~~~~~------r~~~hngeint~~gn~~~~~ar~~~~~~~~~~~~~~~~p~~~~~~sds~~~ 83 (1429)
.+.|-||+|--.- .|||-. =.++|||.|.-.+ . |+. ++. -.+.|||.-+
T Consensus 74 ~IgHvR~AT~G~~~~~NahPf~~~~~~~~~a~aHNG~i~n~~------~-r~~------------~~~--~~s~TDSEvi 132 (257)
T 1te5_A 74 VIGHIRQANVGKVGLSNTHPFIRELGGRYWTFAHNGQLADFQ------P-KPG------------FYR--PVGETDSEAA 132 (257)
T ss_dssp EEEEEEECCCSCCSGGGCSCEEEEETTEEEEEEEESCBSSCC------C-CCC------------SSC--CSSCCHHHHH
T ss_pred EEEEeecCCCCCCCcCcCCCcEecCCCCeEEEEecCcccCch------h-hhc------------cCC--cccCCHHHHH
Confidence 4789999986432 455321 2679999996333 2 221 111 3678999877
Q ss_pred HHHHHhhCccccccCCCCCHHHHHHHHHHhhccCCCC--cceEEEEEcCCeEEEecc----------cCCCCCCcE---E
Q psy12805 84 DCAVMTMVPEAWQNDGTMPDEKRDFYNWAACAMEPWD--GPALLTFTDGRYIGAILD----------RNGLRPSRF---Y 148 (1429)
Q Consensus 84 d~a~~~~~p~a~~~~~~~~~~~~~~y~~~~~~~epwd--gpa~~~~~dg~~~ga~ld----------rnglrp~r~---~ 148 (1429)
=+-+.--.-+.. .++ +...++.+-...+++--. |...++++||+.+-|.-| -+|.||.=. .
T Consensus 133 ~~li~~~~~~~~-~~~---~~~~a~~~al~~l~~~~~~~G~~n~~l~~g~~l~a~rd~~L~~~~~~~p~g~rpL~~~~~~ 208 (257)
T 1te5_A 133 FCDLLNRVRRAF-PEP---VPVEVLLPVLISACDEYRKKGVFNALISDGDWLFTFCSSKLAYITRRAPFGPARLKDADLT 208 (257)
T ss_dssp HHHHHHHHHHHC-SSC---CCHHHHHHHHHHHHHHHHTTBCCEEEEESSSCEEEECSSCEEEEEEESSCCCEEEECSSEE
T ss_pred HHHHHHHHHHhc-CCC---chHHHHHHHHHHHHHHHHhcCcEEEEEEcCCEEEEEEcCCceEEeecCCCcccccccccce
Confidence 663321111100 011 113456666555654444 889999999999999989 788888510 0
Q ss_pred E-------EeCCEEEEEeec
Q psy12805 149 V-------LKDNVMVMASEV 161 (1429)
Q Consensus 149 ~-------~~d~~~~~~se~ 161 (1429)
+ ..|+.+++|||.
T Consensus 209 i~~g~~~~~~~~~~vvASE~ 228 (257)
T 1te5_A 209 VDFHAETTPDDVVTVIATEP 228 (257)
T ss_dssp EEECCCSSTTCEEEEEESSC
T ss_pred eecccccCCCCCEEEEEeCc
Confidence 0 123468899996
No 190
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.11 E-value=0.03 Score=71.35 Aligned_cols=110 Identities=15% Similarity=0.018 Sum_probs=69.5
Q ss_pred HHHHHHHHHHhCC-CCeEEEEecccc-----Ch------HHHHHHHHhcCCcEEEEecCCCCCCccccc-cccccCCC-h
Q psy12805 510 LAELIYDLKCANP-NARISVKLVSEV-----GV------GVVASGVAKGKAEHIVISGHDGGTGASSWT-GIKNAGLP-W 575 (1429)
Q Consensus 510 L~qlI~~Lk~~~~-~~pV~VKLv~e~-----Gv------g~vA~~~akaGaD~I~IsG~~GGTgaap~~-~~~~~GiP-~ 575 (1429)
+.++|+.+|+..+ +.||+||+.+.. |. ..++..+.+ ++|+|.|++..... +.... .....+-. .
T Consensus 202 ~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~-~~~~~~~~~~~~~~~~ 279 (729)
T 1o94_A 202 WLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAE-WGEDAGPSRFYQQGHT 279 (729)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTT-GGGTSCCTTTCCTTTT
T ss_pred HHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccc-cccccCCccccCcccc
Confidence 7788999998874 689999998731 21 124554444 79999998742110 10000 00001111 1
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 576 ELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 576 ~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
...+.++.+. -+++||+.|||.|+.|+..++.-| ||+|++|++++.
T Consensus 280 ~~~~~~i~~~-------~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~ 326 (729)
T 1o94_A 280 IPWVKLVKQV-------SKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIA 326 (729)
T ss_dssp HHHHHHHHTT-------CSSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHH
T ss_pred HHHHHHHHHH-------CCCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhc
Confidence 1112222221 268999999999999999999998 999999997653
No 191
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=95.11 E-value=0.025 Score=63.57 Aligned_cols=98 Identities=19% Similarity=0.148 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccC----hH---HHHHHHHhcCCcEEEEe-cCCCCCCccccccccccCCChHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVG----VG---VVASGVAKGKAEHIVIS-GHDGGTGASSWTGIKNAGLPWELGV 579 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~G----vg---~vA~~~akaGaD~I~Is-G~~GGTgaap~~~~~~~GiP~~laL 579 (1429)
+.+.+.|..+++..+..++.+|+..|.+ .. ..++-+.++|||+|.-| |.. ..|+ ++..+
T Consensus 117 ~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADfVKTSTGf~-~~gA------------t~e~v 183 (260)
T 1p1x_A 117 QVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKV-AVNA------------TPESA 183 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEECCCSCS-SCCC------------CHHHH
T ss_pred HHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC-CCCC------------CHHHH
Confidence 4556666666665422235678776643 22 23445788999999976 443 1122 22222
Q ss_pred HHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcch
Q psy12805 580 AETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGAD 618 (1429)
Q Consensus 580 ~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAd 618 (1429)
..-.+...+.+...++.|-++|||||..|+.+.+.+||+
T Consensus 184 ~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 184 RIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp HHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhh
Confidence 223333333334467999999999999999999999988
No 192
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=95.10 E-value=0.092 Score=57.89 Aligned_cols=112 Identities=19% Similarity=0.102 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccC------hHHHHHHHHhcCCcEEEEe-cCCCCCCccccccccccCCChHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVG------VGVVASGVAKGKAEHIVIS-GHDGGTGASSWTGIKNAGLPWELG 578 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~G------vg~vA~~~akaGaD~I~Is-G~~GGTgaap~~~~~~~GiP~~la 578 (1429)
..+.+.+.|..+++..++ ..+|+..|.+ +...+..+.++|||+|.-| |..-+ ..-+..-+.|-.++..
T Consensus 96 ~~~~v~~ei~~v~~a~~~--~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~---~~~~~~~~~~gAt~~d 170 (226)
T 1vcv_A 96 RWAEVRRDLISVVGAAGG--RVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEE---AYAARQGNPVHSTPER 170 (226)
T ss_dssp CHHHHHHHHHHHHHHTTT--SEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCH---HHHHHTTCCSSCCHHH
T ss_pred CHHHHHHHHHHHHHHHcC--CCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCcc---ccccccCCCCCCCHHH
Confidence 346778888888888644 3778655543 2224455788999999976 43200 0000000001122222
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh---cch----hhhcch
Q psy12805 579 VAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL---GAD----EIGLST 624 (1429)
Q Consensus 579 L~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL---GAd----avg~gt 624 (1429)
+....+..... ..++.|-++|||||..|+...+.+ ||+ -+|.++
T Consensus 171 v~lm~~~i~~~--g~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS~ 221 (226)
T 1vcv_A 171 AAAIARYIKEK--GYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTST 221 (226)
T ss_dssp HHHHHHHHHHH--TCCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEESC
T ss_pred HHHHHHHHHHh--CCCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecCc
Confidence 22222322222 356899999999999999999999 999 776554
No 193
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=94.94 E-value=0.024 Score=71.78 Aligned_cols=124 Identities=19% Similarity=0.171 Sum_probs=77.2
Q ss_pred cccCCCC--CCCC--CHHH----HHHHHHHHHHhCC-CCeEEEEecccc----C-----hHHHHHHHHhcCCcEEEEecC
Q psy12805 495 LISPPPH--HDIY--SIED----LAELIYDLKCANP-NARISVKLVSEV----G-----VGVVASGVAKGKAEHIVISGH 556 (1429)
Q Consensus 495 LisP~~h--~di~--sied----L~qlI~~Lk~~~~-~~pV~VKLv~e~----G-----vg~vA~~~akaGaD~I~IsG~ 556 (1429)
..||-.. .|-| |+|. +.++|+.+|+..+ +.||.||+.+.. | ...++..+.+ ++|+|.|++.
T Consensus 187 Flsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~ 265 (690)
T 3k30_A 187 FLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMG 265 (690)
T ss_dssp HHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECS
T ss_pred hCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecc
Confidence 3466433 3555 6763 7788999998875 579999998752 2 1225555555 8999999964
Q ss_pred CCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 557 DGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 557 ~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
.-.....+.. ...-+..+. ....+.+. -+++||+.|+|+++.++..++.-| ||+|++|++++.
T Consensus 266 ~~~~~~~~~~-~~~~~~~~~-~~~~i~~~-------~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~ 329 (690)
T 3k30_A 266 SWEGDSVTSR-FAPEGRQEE-FVAGLKKL-------TTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIA 329 (690)
T ss_dssp CHHHHTCCTT-TCCTTTTHH-HHTTSGGG-------CSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred cccccCCCCc-cCCccccHH-HHHHHHHH-------cCCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHh
Confidence 2000000000 001111111 11111111 258999999999999999999998 999999997664
No 194
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=94.89 E-value=0.047 Score=59.93 Aligned_cols=75 Identities=16% Similarity=0.059 Sum_probs=52.0
Q ss_pred HHHHHHHHhcCCcEEEEecCCC-CCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh
Q psy12805 537 GVVASGVAKGKAEHIVISGHDG-GTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL 615 (1429)
Q Consensus 537 g~vA~~~akaGaD~I~IsG~~G-GTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL 615 (1429)
-..+..+.+.|++.|.+.+..- ++ ..|.. ...+.++.+. ..++|+++|||++..|+.+++.+
T Consensus 149 ~e~~~~~~~~G~~~i~~~~~~~~~~---------~~g~~-~~~~~~i~~~-------~~ipvia~GGI~~~~d~~~~~~~ 211 (244)
T 1vzw_A 149 YETLDRLNKEGCARYVVTDIAKDGT---------LQGPN-LELLKNVCAA-------TDRPVVASGGVSSLDDLRAIAGL 211 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEEC----------------CCC-HHHHHHHHHT-------CSSCEEEESCCCSHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCEEEEeccCcccc---------cCCCC-HHHHHHHHHh-------cCCCEEEECCCCCHHHHHHHHhh
Confidence 3456778899999998876431 11 12332 2333443322 15899999999999999999999
Q ss_pred ---cchhhhcchhHHH
Q psy12805 616 ---GADEIGLSTAPLI 628 (1429)
Q Consensus 616 ---GAdavg~gt~~L~ 628 (1429)
||+.|.+|++++-
T Consensus 212 ~~~Gadgv~vG~al~~ 227 (244)
T 1vzw_A 212 VPAGVEGAIVGKALYA 227 (244)
T ss_dssp GGGTEEEEEECHHHHT
T ss_pred ccCCCceeeeeHHHHc
Confidence 9999999997653
No 195
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=94.79 E-value=0.079 Score=57.37 Aligned_cols=75 Identities=19% Similarity=0.117 Sum_probs=47.4
Q ss_pred HHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcch
Q psy12805 539 VASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGAD 618 (1429)
Q Consensus 539 vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAd 618 (1429)
.+..+.++|+|+|.++...++. ...|.+ ...+..+.+..... +++++++||| |..++..++..||+
T Consensus 122 ~~~~a~~~gaD~i~~~~~f~~~--------~~~g~~-~~~~~~l~~~~~~~----~~pvia~GGI-~~~nv~~~~~~Ga~ 187 (221)
T 1yad_A 122 EAVQAEKEDADYVLFGHVFETD--------CKKGLE-GRGVSLLSDIKQRI----SIPVIAIGGM-TPDRLRDVKQAGAD 187 (221)
T ss_dssp HHHHHHHTTCSEEEEECCC-------------------CHHHHHHHHHHHC----CSCEEEESSC-CGGGHHHHHHTTCS
T ss_pred HHHHHHhCCCCEEEECCccccC--------CCCCCC-CCCHHHHHHHHHhC----CCCEEEECCC-CHHHHHHHHHcCCC
Confidence 3566778999999986542221 011111 12222222221111 5889999999 99999999999999
Q ss_pred hhhcchhHH
Q psy12805 619 EIGLSTAPL 627 (1429)
Q Consensus 619 avg~gt~~L 627 (1429)
.|.+|++.+
T Consensus 188 gv~vgs~i~ 196 (221)
T 1yad_A 188 GIAVMSGIF 196 (221)
T ss_dssp EEEESHHHH
T ss_pred EEEEhHHhh
Confidence 999998654
No 196
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=94.66 E-value=0.24 Score=55.08 Aligned_cols=107 Identities=17% Similarity=0.141 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChH-HHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWE-LGVAETHQVL 586 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~-laL~ev~q~L 586 (1429)
+++.+++..+++. +.++++-+.+..-... ...+.+.+.+++.+....|-||... .. .|.. ..+.++.+.
T Consensus 130 ~~~~~~~~~~~~~--g~~~i~~~a~~t~~e~-~~~~~~~~~g~v~~~s~~G~tG~~~-----~~-~~~~~~~i~~v~~~- 199 (262)
T 1rd5_A 130 VAAHSLWSEAKNN--NLELVLLTTPAIPEDR-MKEITKASEGFVYLVSVNGVTGPRA-----NV-NPRVESLIQEVKKV- 199 (262)
T ss_dssp TTHHHHHHHHHHT--TCEECEEECTTSCHHH-HHHHHHHCCSCEEEECSSCCBCTTS-----CB-CTHHHHHHHHHHHH-
T ss_pred hhHHHHHHHHHHc--CCceEEEECCCCCHHH-HHHHHhcCCCeEEEecCCCCCCCCc-----CC-CchHHHHHHHHHhh-
Confidence 3466677777765 4555555554433332 2334445556666544444354321 11 1322 234444432
Q ss_pred HhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHh
Q psy12805 587 ALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITM 630 (1429)
Q Consensus 587 ~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~al 630 (1429)
.+++|++.|||.|+.++.+++.+|||.|-+|++.+-+.
T Consensus 200 ------~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~~~ 237 (262)
T 1rd5_A 200 ------TNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQL 237 (262)
T ss_dssp ------CSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred ------cCCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhHH
Confidence 15899999999999999999999999999999876644
No 197
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=94.63 E-value=0.082 Score=60.00 Aligned_cols=96 Identities=21% Similarity=0.175 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHhCCCCeEEEEeccccCh----H---HHHHHHHhcCCcEEEEe-cCCCCCCccccccccccCCChHHHHH
Q psy12805 509 DLAELIYDLKCANPNARISVKLVSEVGV----G---VVASGVAKGKAEHIVIS-GHDGGTGASSWTGIKNAGLPWELGVA 580 (1429)
Q Consensus 509 dL~qlI~~Lk~~~~~~pV~VKLv~e~Gv----g---~vA~~~akaGaD~I~Is-G~~GGTgaap~~~~~~~GiP~~laL~ 580 (1429)
.+.+.|..+++..++ ..+|+..|.+. . ..+..+.++|||+|.-| |.. ..||+ ++-...+.
T Consensus 142 ~v~~eI~~v~~a~~~--~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~-~~gAT---------~edv~lm~ 209 (281)
T 2a4a_A 142 EATKLTQSVKKLLTN--KILKVIIEVGELKTEDLIIKTTLAVLNGNADFIKTSTGKV-QINAT---------PSSVEYII 209 (281)
T ss_dssp HHHHHHHHHHTTCTT--SEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEEECCCSCS-SCCCC---------HHHHHHHH
T ss_pred HHHHHHHHHHHHhcC--CceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC-CCCCC---------HHHHHHHH
Confidence 677788888887654 56787776532 1 23455788999999977 443 11222 23333333
Q ss_pred HHHHHH----HhcCCCCceEEEEcCCcccHHHHHHHHHhcch
Q psy12805 581 ETHQVL----ALNNLRSRVVLQADGQIRTGFDVVVAALLGAD 618 (1429)
Q Consensus 581 ev~q~L----~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAd 618 (1429)
++.+.. .+.| .++.|-++|||||..|+.+.+.+||+
T Consensus 210 ~~v~~~~~~~~~tg--~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 210 KAIKEYIKNNPEKN--NKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp HHHHHHHHHCGGGT--TCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccCC--CCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 332211 0113 46899999999999999999999998
No 198
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=94.63 E-value=0.17 Score=57.30 Aligned_cols=122 Identities=16% Similarity=0.089 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccc----cChHHHHHHHHhcCCcEEEEecCCCCC-----------Cc------cc
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSE----VGVGVVASGVAKGKAEHIVISGHDGGT-----------GA------SS 564 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e----~Gvg~vA~~~akaGaD~I~IsG~~GGT-----------ga------ap 564 (1429)
+.+++.+++.++|+.++++||.+-.-.+ .|+...+..++++|+|.+++-+-.-.. |- +|
T Consensus 80 ~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap 159 (271)
T 3nav_A 80 TPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPP 159 (271)
T ss_dssp CHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECC
Confidence 5678888899998876688998853221 377778888889999987665331110 00 01
Q ss_pred cccc--------------------cccCCCh--HHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 565 WTGI--------------------KNAGLPW--ELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 565 ~~~~--------------------~~~GiP~--~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
.++. -..|... ...+.+..+.+++. .++++++.+||+|+.|+.+++..|||.|=+
T Consensus 160 ~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~---~~~Pv~vGfGIst~e~~~~~~~~gADgvIV 236 (271)
T 3nav_A 160 TASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQF---DAPPALLGFGISEPAQVKQAIEAGAAGAIS 236 (271)
T ss_dssp TCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHT---TCCCEEECSSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHh---cCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 0000 0112111 01123333333333 258999999999999999899999999999
Q ss_pred chhHHHHh
Q psy12805 623 STAPLITM 630 (1429)
Q Consensus 623 gt~~L~al 630 (1429)
|++..-.+
T Consensus 237 GSAiv~~i 244 (271)
T 3nav_A 237 GSAVVKII 244 (271)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 99776544
No 199
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=94.60 E-value=0.14 Score=57.78 Aligned_cols=101 Identities=20% Similarity=0.131 Sum_probs=68.9
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQV 585 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~ 585 (1429)
+.+++.+++...++. +..+.|-.. ... .+..+.++|+|+|-+.+.+..+. ..++.. +.+
T Consensus 147 ~~~~l~~l~~~a~~l--Gl~~lvev~---t~e-e~~~A~~~Gad~IGv~~r~l~~~--------~~dl~~---~~~---- 205 (272)
T 3qja_A 147 EQSVLVSMLDRTESL--GMTALVEVH---TEQ-EADRALKAGAKVIGVNARDLMTL--------DVDRDC---FAR---- 205 (272)
T ss_dssp CHHHHHHHHHHHHHT--TCEEEEEES---SHH-HHHHHHHHTCSEEEEESBCTTTC--------CBCTTH---HHH----
T ss_pred CHHHHHHHHHHHHHC--CCcEEEEcC---CHH-HHHHHHHCCCCEEEECCCccccc--------ccCHHH---HHH----
Confidence 457788888888775 456655432 233 34556788999999997764431 112222 222
Q ss_pred HHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 586 LALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 586 L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
|.. .+...+++++.|||.|+.|+..+..+||++|.+|++.|-
T Consensus 206 l~~-~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~ 247 (272)
T 3qja_A 206 IAP-GLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVT 247 (272)
T ss_dssp HGG-GSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHT
T ss_pred HHH-hCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhC
Confidence 211 123368999999999999999999999999999997664
No 200
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.55 E-value=0.062 Score=57.55 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHH
Q psy12805 507 IEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVL 586 (1429)
Q Consensus 507 iedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L 586 (1429)
.+++.++++.+++. +.++.+-+......-..+..+.+.|+|+|.+. .|.+|. ..+......+.++.+.+
T Consensus 89 ~~~~~~~~~~~~~~--g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~--~g~~g~-------~~~~~~~~~i~~l~~~~ 157 (211)
T 3f4w_A 89 VLTIQSCIRAAKEA--GKQVVVDMICVDDLPARVRLLEEAGADMLAVH--TGTDQQ-------AAGRKPIDDLITMLKVR 157 (211)
T ss_dssp HHHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHHTCCEEEEE--CCHHHH-------HTTCCSHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHcCCCEEEEc--CCCccc-------ccCCCCHHHHHHHHHHc
Confidence 46677888888876 46666643222223345677889999999875 222211 11111223334333321
Q ss_pred HhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 587 ALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 587 ~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
.+++++++|||+ +.++..++.+|||.+.+|++.+
T Consensus 158 ------~~~~i~~~gGI~-~~~~~~~~~~Gad~vvvGsai~ 191 (211)
T 3f4w_A 158 ------RKARIAVAGGIS-SQTVKDYALLGPDVVIVGSAIT 191 (211)
T ss_dssp ------SSCEEEEESSCC-TTTHHHHHTTCCSEEEECHHHH
T ss_pred ------CCCcEEEECCCC-HHHHHHHHHcCCCEEEECHHHc
Confidence 258999999996 9999999999999999998544
No 201
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.55 E-value=0.027 Score=58.47 Aligned_cols=44 Identities=23% Similarity=0.156 Sum_probs=37.1
Q ss_pred CCccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCC
Q psy12805 1365 TYLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFLMGTST 1409 (1429)
Q Consensus 1365 ~~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g~~~ 1409 (1429)
.+.|+.++||+|||++.++ .+..|+.+|+.||+.|.++|+++..
T Consensus 289 ~~~~~~~~v~l~GDa~~g~-gv~~A~~sG~~aA~~I~~~L~~e~~ 332 (336)
T 3kkj_A 289 ALSDADLGIYVCGDWCLSG-RVEGAWLSGQEAARRLLEHLQLEHH 332 (336)
T ss_dssp SEEETTTTEEECCGGGTTS-SHHHHHHHHHHHHHHHHHHTTC---
T ss_pred ceeeCCCCEEEEecccCCc-CHHHHHHHHHHHHHHHHHHhhccCC
Confidence 5678899999999998765 5899999999999999999998764
No 202
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=94.51 E-value=0.042 Score=60.62 Aligned_cols=77 Identities=19% Similarity=0.156 Sum_probs=55.5
Q ss_pred hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh
Q psy12805 536 VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL 615 (1429)
Q Consensus 536 vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL 615 (1429)
...+|..+.++|+|.|.+.+.++.. ...+..+ ..+.++.+ . ..++|++.|||+|..|+.+++..
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~--------~~~~~~~-~~i~~i~~----~---~~ipvi~~Ggi~~~~~~~~~l~~ 100 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDG--------TKSGYDT-EMIRFVRP----L---TTLPIIASGGAGKMEHFLEAFLR 100 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTT--------CSSCCCH-HHHHHHGG----G---CCSCEEEESCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEEecCccc--------CCCcccH-HHHHHHHH----h---CCCCEEEeCCCCCHHHHHHHHHc
Confidence 4567888999999999998765321 0112222 22232222 1 26899999999999999999999
Q ss_pred cchhhhcchhHHH
Q psy12805 616 GADEIGLSTAPLI 628 (1429)
Q Consensus 616 GAdavg~gt~~L~ 628 (1429)
|||.|.+|+.++-
T Consensus 101 Gad~V~ig~~~l~ 113 (247)
T 3tdn_A 101 GADKVSINTAAVE 113 (247)
T ss_dssp TCSEECCSHHHHH
T ss_pred CCCeeehhhHHhh
Confidence 9999999997663
No 203
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=94.49 E-value=0.0027 Score=76.55 Aligned_cols=57 Identities=44% Similarity=0.812 Sum_probs=51.9
Q ss_pred CCCceEEEccccccccHHHHHHhCCCCccccccccchhhccchHHHHHHHHHHhCCCCC
Q psy12805 1240 VRKGLRIQAARCMECGVPFCQSSHGCPLGNIIPKWNDLIYHNNWSEALNQLLQTNNFPA 1298 (1429)
Q Consensus 1240 ~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~~d~lvf~~e~~~al~~~Le~~G~~~ 1298 (1429)
..+.+..+++||++|+.|+|+. +||+++.+|.|..++..++|.++++.++++|.|+.
T Consensus 11 ~~~~~~~~a~rc~~c~~~~C~~--~CP~~~~i~~~~~~~~~g~~~~A~~~~~~~n~~p~ 67 (456)
T 2vdc_G 11 SDERANEQANRCSQCGVPFCQV--HCPVSNNIPDWLKLTSEGRLEEAYEVSQATNNFPE 67 (456)
T ss_dssp CCTTHHHHHHHSCCCSSCHHHH--TSTTCCCHHHHHHHHHHTCHHHHHHHHHHHCSCHH
T ss_pred CHHHHHHHHHhhhcCCCchhhc--CCCCCCcHHHHHHHHHCCCHHHHHHHHHhhCCCCc
Confidence 4566777899999999999998 99999999999999999999999999999998764
No 204
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=94.39 E-value=0.043 Score=65.41 Aligned_cols=122 Identities=14% Similarity=0.098 Sum_probs=76.6
Q ss_pred ccccCC--CCCCCC--CHHH----HHHHHHHHHHhCCCCeEEEEecccc---------C-------hHHHHHHH---Hhc
Q psy12805 494 GLISPP--PHHDIY--SIED----LAELIYDLKCANPNARISVKLVSEV---------G-------VGVVASGV---AKG 546 (1429)
Q Consensus 494 ~LisP~--~h~di~--sied----L~qlI~~Lk~~~~~~pV~VKLv~e~---------G-------vg~vA~~~---aka 546 (1429)
..+||- ...|-| |+|. +.++|+.+|+..+.-||.||+.+.. + ...++..+ .++
T Consensus 197 QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~ 276 (407)
T 3tjl_A 197 QFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADK 276 (407)
T ss_dssp HHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHT
T ss_pred HhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhc
Confidence 345663 223555 5654 7788889998886568999999732 1 12366777 778
Q ss_pred C--CcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh---c-chhh
Q psy12805 547 K--AEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL---G-ADEI 620 (1429)
Q Consensus 547 G--aD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL---G-Adav 620 (1429)
| +|+|.|+... +... .........+. +..+.+.. +++||+.||+.+..|+.+++.- | ||+|
T Consensus 277 G~~l~ylhv~~~~--~~~~-~~~~~~~~~~~---~~~ir~~~-------~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlV 343 (407)
T 3tjl_A 277 GQGIAYISVVEPR--VSGN-VDVSEEDQAGD---NEFVSKIW-------KGVILKAGNYSYDAPEFKTLKEDIADKRTLV 343 (407)
T ss_dssp TCCCSEEEEECTT--EETT-EECCGGGCCCC---SHHHHHHC-------CSEEEEESCGGGGTTTTHHHHHHHTTSSEEE
T ss_pred CCceeEEEEEccc--cCCC-CcCCccchhHH---HHHHHHHh-------CCCEEecCCCCCHHHHHHHHHhhccCCCeEE
Confidence 9 9999998421 1110 00000000111 22233322 4699999999999887777665 5 9999
Q ss_pred hcchhHHH
Q psy12805 621 GLSTAPLI 628 (1429)
Q Consensus 621 g~gt~~L~ 628 (1429)
++|++++.
T Consensus 344 a~GR~~ia 351 (407)
T 3tjl_A 344 GFSRYFTS 351 (407)
T ss_dssp ECSHHHHH
T ss_pred EeChhhhh
Confidence 99997775
No 205
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=94.33 E-value=0.24 Score=55.42 Aligned_cols=36 Identities=8% Similarity=-0.180 Sum_probs=31.6
Q ss_pred ceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHh
Q psy12805 594 RVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITM 630 (1429)
Q Consensus 594 ~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~al 630 (1429)
+++|.+.+||+|+.++.+ +..|||.|-+|++.+-..
T Consensus 206 ~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~~ 241 (262)
T 2ekc_A 206 DKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKLA 241 (262)
T ss_dssp CSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHHH
T ss_pred CCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhhh
Confidence 578999999999999988 888999999999777643
No 206
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=94.21 E-value=0.082 Score=57.84 Aligned_cols=76 Identities=14% Similarity=0.055 Sum_probs=53.7
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh-
Q psy12805 537 GVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL- 615 (1429)
Q Consensus 537 g~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL- 615 (1429)
-..+..+.++|++.|.+.+..-+.. ..|..+ ..+.++.+ . .+++|+++|||.+..|+.+++.+
T Consensus 152 ~e~~~~~~~~G~~~i~~~~~~~~~~--------~~g~~~-~~~~~l~~----~---~~ipvia~GGI~~~~d~~~~~~~~ 215 (244)
T 2y88_A 152 WDVLERLDSEGCSRFVVTDITKDGT--------LGGPNL-DLLAGVAD----R---TDAPVIASGGVSSLDDLRAIATLT 215 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEETTTTTT--------TSCCCH-HHHHHHHT----T---CSSCEEEESCCCSHHHHHHHHTTG
T ss_pred HHHHHHHHhCCCCEEEEEecCCccc--------cCCCCH-HHHHHHHH----h---CCCCEEEECCCCCHHHHHHHHhhc
Confidence 4566778899999999887542210 123322 22333322 1 26899999999999999999988
Q ss_pred --cchhhhcchhHHH
Q psy12805 616 --GADEIGLSTAPLI 628 (1429)
Q Consensus 616 --GAdavg~gt~~L~ 628 (1429)
||+.|.+|++++-
T Consensus 216 ~~Gad~v~vG~al~~ 230 (244)
T 2y88_A 216 HRGVEGAIVGKALYA 230 (244)
T ss_dssp GGTEEEEEECHHHHT
T ss_pred cCCCCEEEEcHHHHC
Confidence 9999999997654
No 207
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=93.87 E-value=0.11 Score=56.85 Aligned_cols=77 Identities=16% Similarity=0.047 Sum_probs=56.3
Q ss_pred hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh
Q psy12805 536 VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL 615 (1429)
Q Consensus 536 vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL 615 (1429)
....+..+.++|++.|.+++.. .+| ...|..+ ..+.++.+.+ +++++++|||++..|+.+++.+
T Consensus 146 ~~e~~~~~~~~G~~~i~~t~~~-~~g-------~~~g~~~-~~i~~l~~~~-------~iPvia~GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 146 PVSLLKRLKEYGLEEIVHTEIE-KDG-------TLQEHDF-SLTKKIAIEA-------EVKVLAAGGISSENSLKTAQKV 209 (241)
T ss_dssp HHHHHHHHHTTTCCEEEEEETT-HHH-------HTCCCCH-HHHHHHHHHH-------TCEEEEESSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEeec-ccc-------cCCcCCH-HHHHHHHHhc-------CCcEEEECCCCCHHHHHHHHhc
Confidence 3455677889999999998753 111 1234433 3445555543 5899999999999999999988
Q ss_pred -----c-chhhhcchhHHH
Q psy12805 616 -----G-ADEIGLSTAPLI 628 (1429)
Q Consensus 616 -----G-Adavg~gt~~L~ 628 (1429)
| |++|-+|++++-
T Consensus 210 ~~~~~G~adgv~vgsal~~ 228 (241)
T 1qo2_A 210 HTETNGLLKGVIVGRAFLE 228 (241)
T ss_dssp HHHTTTSEEEEEECHHHHT
T ss_pred ccccCCeEeEEEeeHHHHc
Confidence 9 999999997664
No 208
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=93.79 E-value=0.15 Score=56.10 Aligned_cols=36 Identities=17% Similarity=0.063 Sum_probs=32.7
Q ss_pred ceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHH
Q psy12805 594 RVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLIT 629 (1429)
Q Consensus 594 ~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~a 629 (1429)
+++|+++|||+++.|+.+++.+||+.|.+|++.+-+
T Consensus 191 ~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~ 226 (248)
T 1geq_A 191 RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKI 226 (248)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhh
Confidence 588999999999999999999999999999977654
No 209
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=93.64 E-value=0.083 Score=58.61 Aligned_cols=74 Identities=20% Similarity=0.147 Sum_probs=52.6
Q ss_pred HHHHHHHHhcCCcEEEEecCC--CCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHH
Q psy12805 537 GVVASGVAKGKAEHIVISGHD--GGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAAL 614 (1429)
Q Consensus 537 g~vA~~~akaGaD~I~IsG~~--GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla 614 (1429)
...+..+.+.|++.|.+++.. |. ..|..+. .+.++.+. .+++++++|||+++.|+.+++.
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~----------~~g~~~~-~i~~l~~~-------~~ipvia~GGI~~~ed~~~~~~ 220 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGT----------KSGYDTE-MIRFVRPL-------TTLPIIASGGAGKMEHFLEAFL 220 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTT----------CSCCCHH-HHHHHGGG-------CCSCEEEESCCCSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCC----------cCCCCHH-HHHHHHHH-------cCCCEEEeCCCCCHHHHHHHHH
Confidence 445677889999999997642 22 2344332 22332221 2689999999999999999999
Q ss_pred hcchhhhcchhHHH
Q psy12805 615 LGADEIGLSTAPLI 628 (1429)
Q Consensus 615 LGAdavg~gt~~L~ 628 (1429)
.||++|.+|++++-
T Consensus 221 ~Gadgv~vgsal~~ 234 (266)
T 2w6r_A 221 AGADAALAASVFHF 234 (266)
T ss_dssp HTCSEEEESTTTC-
T ss_pred cCCHHHHccHHHHc
Confidence 99999999986543
No 210
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=93.62 E-value=0.1 Score=56.72 Aligned_cols=75 Identities=20% Similarity=0.126 Sum_probs=52.7
Q ss_pred HHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcc
Q psy12805 538 VVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGA 617 (1429)
Q Consensus 538 ~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGA 617 (1429)
..+..+.++|+|.|.+.+..-+ |. ..|.. ...+.++.+. .+++|+++|||.+..|+.+++..||
T Consensus 158 e~~~~~~~~G~d~i~~~~~~~~-g~-------~~~~~-~~~i~~l~~~-------~~~pvia~GGi~~~~~~~~~~~~Ga 221 (253)
T 1h5y_A 158 KWAKEVEELGAGEILLTSIDRD-GT-------GLGYD-VELIRRVADS-------VRIPVIASGGAGRVEHFYEAAAAGA 221 (253)
T ss_dssp HHHHHHHHHTCSEEEEEETTTT-TT-------CSCCC-HHHHHHHHHH-------CSSCEEEESCCCSHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCEEEEecccCC-CC-------cCcCC-HHHHHHHHHh-------cCCCEEEeCCCCCHHHHHHHHHcCC
Confidence 4567788899999998765421 11 11222 2233444332 1589999999999999999999999
Q ss_pred hhhhcchhHHH
Q psy12805 618 DEIGLSTAPLI 628 (1429)
Q Consensus 618 davg~gt~~L~ 628 (1429)
+.|.+|++.+-
T Consensus 222 ~~v~vgsal~~ 232 (253)
T 1h5y_A 222 DAVLAASLFHF 232 (253)
T ss_dssp SEEEESHHHHT
T ss_pred cHHHHHHHHHc
Confidence 99999986553
No 211
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=93.44 E-value=0.23 Score=56.15 Aligned_cols=102 Identities=9% Similarity=-0.026 Sum_probs=70.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHH
Q psy12805 505 YSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQ 584 (1429)
Q Consensus 505 ~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q 584 (1429)
.+.+++.+++...++. +.-+.|-. --...+..+.++|+|+|-+.+++..| ..+..... .+..+
T Consensus 153 L~~~~l~~l~~~a~~l--Gl~~lvev----h~~eEl~~A~~~ga~iIGinnr~l~t----------~~~dl~~~-~~L~~ 215 (272)
T 3tsm_A 153 VDDDLAKELEDTAFAL--GMDALIEV----HDEAEMERALKLSSRLLGVNNRNLRS----------FEVNLAVS-ERLAK 215 (272)
T ss_dssp SCHHHHHHHHHHHHHT--TCEEEEEE----CSHHHHHHHTTSCCSEEEEECBCTTT----------CCBCTHHH-HHHHH
T ss_pred cCHHHHHHHHHHHHHc--CCeEEEEe----CCHHHHHHHHhcCCCEEEECCCCCcc----------CCCChHHH-HHHHH
Confidence 4667888888888875 44455542 22233466788999999888776443 22332222 12212
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
. +...+++|+-|||.|+.|+.++..+||++|-+|++.|-
T Consensus 216 ~-----ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr 254 (272)
T 3tsm_A 216 M-----APSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMR 254 (272)
T ss_dssp H-----SCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHT
T ss_pred h-----CCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcC
Confidence 1 23468999999999999999999999999999997665
No 212
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.26 E-value=0.075 Score=62.28 Aligned_cols=93 Identities=9% Similarity=0.041 Sum_probs=62.6
Q ss_pred chHHHHHHHHHHhCC-CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEecc--------ccCchhhh-hhccC
Q psy12805 1281 NNWSEALNQLLQTNN-FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMG--------FLGPERYI-ANELD 1350 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~G-~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG--------~~pp~~~L-le~lG 1350 (1429)
+.+...+++++++.+ +.++.+|++|+.. ++.+.... .++ ++++||.||+|+| +.|+...+ ++.++
T Consensus 204 ~g~~~l~~~~~~~~g~i~~~~~V~~i~~~---~~~v~v~~-~~g-~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~ 278 (431)
T 3k7m_X 204 NGSADLVDAMSQEIPEIRLQTVVTGIDQS---GDVVNVTV-KDG-HAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIE 278 (431)
T ss_dssp TCTHHHHHHHHTTCSCEESSCCEEEEECS---SSSEEEEE-TTS-CCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHH
T ss_pred CcHHHHHHHHHhhCCceEeCCEEEEEEEc---CCeEEEEE-CCC-CEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHH
Confidence 356677777776664 6678889988652 23344333 332 3699999999999 88665443 33333
Q ss_pred ccccCCCCEEecCCCCccCCCCEEEeCCCC
Q psy12805 1351 LTLDPRSNYSTVEKTYLTTVPRVYAAGDCR 1380 (1429)
Q Consensus 1351 Leld~~G~I~VD~~~~~TSvPgVFAAGD~a 1380 (1429)
..... ..++|+. .++|+.++||+.||+.
T Consensus 279 ~~~~~-~~~kv~~-~~~~~~~~i~~~~d~~ 306 (431)
T 3k7m_X 279 EGHGG-QGLKILI-HVRGAEAGIECVGDGI 306 (431)
T ss_dssp HCCCC-CEEEEEE-EEESCCTTEEEEBSSS
T ss_pred hCCCc-ceEEEEE-EECCCCcCceEcCCCC
Confidence 32232 3388886 7899999999999984
No 213
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=93.21 E-value=0.28 Score=54.74 Aligned_cols=92 Identities=12% Similarity=-0.044 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccc----------cChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHH
Q psy12805 510 LAELIYDLKCANPNARISVKLVSE----------VGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGV 579 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e----------~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL 579 (1429)
+.++++..++. +.|+.++..+. ..+...+..+.++|+|+|.++-. .. ...+
T Consensus 134 ~~~v~~~~~~~--g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~~----------------~~-~~~l 194 (273)
T 2qjg_A 134 LGMIAETCEYW--GMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSYT----------------GD-IDSF 194 (273)
T ss_dssp HHHHHHHHHHH--TCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECCC----------------SS-HHHH
T ss_pred HHHHHHHHHHc--CCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECCC----------------CC-HHHH
Confidence 34444444433 68898875211 11222346688899999998720 11 1223
Q ss_pred HHHHHHHHhcCCCCceEEEEcCCccc--HHH----HHHHHHhcchhhhcchhHH
Q psy12805 580 AETHQVLALNNLRSRVVLQADGQIRT--GFD----VVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 580 ~ev~q~L~~~gLR~~V~LiasGGIrt--g~D----v~kAlaLGAdavg~gt~~L 627 (1429)
.++.+.+ .+++++.|||++ ..| +..++.+||+.|.+|+..+
T Consensus 195 ~~i~~~~-------~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~ 241 (273)
T 2qjg_A 195 RDVVKGC-------PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIF 241 (273)
T ss_dssp HHHHHHC-------SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHH
T ss_pred HHHHHhC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhh
Confidence 4433322 589999999996 667 5556689999999988654
No 214
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=93.17 E-value=0.35 Score=55.05 Aligned_cols=41 Identities=24% Similarity=0.251 Sum_probs=32.4
Q ss_pred cCCCCEEEeCCCCCC--C---CcHHHHHHHHHHHHHHHHHHHhCCC
Q psy12805 1368 TTVPRVYAAGDCRRG--Q---SLVVWAISEGRQAAREIDSFLMGTS 1408 (1429)
Q Consensus 1368 TSvPgVFAAGD~a~g--~---~lvv~Ai~qGr~AA~nI~~~L~g~~ 1408 (1429)
+..++|+.+||+++. | .=+..|+.+|+.||+.|.+.+....
T Consensus 274 ~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~ 319 (397)
T 3oz2_A 274 ITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESND 319 (397)
T ss_dssp CEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCC
Confidence 345799999999763 2 2378899999999999999887543
No 215
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=93.17 E-value=0.15 Score=55.94 Aligned_cols=75 Identities=21% Similarity=0.140 Sum_probs=52.5
Q ss_pred HHHHHHHHhcCCcEEEEecCC-CCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh
Q psy12805 537 GVVASGVAKGKAEHIVISGHD-GGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL 615 (1429)
Q Consensus 537 g~vA~~~akaGaD~I~IsG~~-GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL 615 (1429)
-..+..+.+.|++.|.+.+.. .++ ..|..+. .+.++.+ . ..++++++|||++..|+.+++..
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~~g~---------~~g~~~~-~~~~l~~----~---~~ipvia~GGI~~~~d~~~~~~~ 216 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDRDGT---------KSGYDTE-MIRFVRP----L---TTLPIIASGGAGKMEHFLEAFLA 216 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTS---------CSCCCHH-HHHHHGG----G---CCSCEEEESCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEEEeccCCCC---------CCCCCHH-HHHHHHH----h---cCCCEEEECCCCCHHHHHHHHHc
Confidence 345677889999999987542 121 2233332 2333322 1 26899999999999999999999
Q ss_pred cchhhhcchhHHH
Q psy12805 616 GADEIGLSTAPLI 628 (1429)
Q Consensus 616 GAdavg~gt~~L~ 628 (1429)
||++|-+|++++-
T Consensus 217 Gadgv~vGsal~~ 229 (253)
T 1thf_D 217 GADAALAASVFHF 229 (253)
T ss_dssp TCSEEEESHHHHT
T ss_pred CChHHHHHHHHHc
Confidence 9999999986653
No 216
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=92.64 E-value=1.1 Score=49.31 Aligned_cols=101 Identities=17% Similarity=0.154 Sum_probs=70.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecccc-ChHH--------------------HHHHHHhcCCcEEEEecCCCCCCcc
Q psy12805 505 YSIEDLAELIYDLKCANPNARISVKLVSEV-GVGV--------------------VASGVAKGKAEHIVISGHDGGTGAS 563 (1429)
Q Consensus 505 ~siedL~qlI~~Lk~~~~~~pV~VKLv~e~-Gvg~--------------------vA~~~akaGaD~I~IsG~~GGTgaa 563 (1429)
++.|++.+.-..|.+..+ .|.||++... |+.. -|..+++|||++|-. .-|.
T Consensus 64 ~d~e~mi~eA~~L~~~~~--nv~IKIP~T~eGl~A~~~L~~~GI~vn~TlifS~~QA~~Aa~AGa~yISP--fvgR---- 135 (223)
T 3s1x_A 64 TKYEGMVEEARKIHGLGD--NAVVKIPMTEDGLRAIKTLSSEHINTNCTLVFNPIQALLAAKAGVTYVSP--FVGR---- 135 (223)
T ss_dssp CSHHHHHHHHHHHHHTCT--TEEEEEESSHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEE--BSHH----
T ss_pred CCHHHHHHHHHHHHHhCC--CEEEEeCCCHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCeEEEe--ecch----
Confidence 566766666666766653 5888887643 3322 223366778877654 2222
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhh
Q psy12805 564 SWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEI 620 (1429)
Q Consensus 564 p~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdav 620 (1429)
+++||.|-...+.++++.+..++.+. .|+ ...+|+..++..++++|||.+
T Consensus 136 ----i~d~g~dG~~~v~~i~~~~~~~~~~T--~Il-aAS~Rn~~~v~~aa~~G~d~~ 185 (223)
T 3s1x_A 136 ----LDDIGEDGMQIIDMIRTIFNNYIIKT--QIL-VASIRNPIHVLRSAVIGADVV 185 (223)
T ss_dssp ----HHHTTSCTHHHHHHHHHHHHHTTCCS--EEE-EBSCCSHHHHHHHHHHTCSEE
T ss_pred ----HhhcCCCHHHHHHHHHHHHHHcCCCC--EEE-EEeCCCHHHHHHHHHcCCCEE
Confidence 56888888888999999999888764 344 456999999999999998865
No 217
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=92.49 E-value=0.35 Score=55.27 Aligned_cols=87 Identities=16% Similarity=0.189 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
+.+.|+.+|+..|.+||.|- +.--..+..+.++|+|+|.+++.. | .-+.++.+.+
T Consensus 194 i~~Av~~ar~~~p~~kIeVE----v~tl~e~~eAl~aGaDiImLDn~s----------------~--~~l~~av~~~--- 248 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNEYIAIE----CDNISQVEESLSNNVDMILLDNMS----------------I--SEIKKAVDIV--- 248 (300)
T ss_dssp HHHHHHHHHHHSSSCCEEEE----ESSHHHHHHHHHTTCSEEEEESCC----------------H--HHHHHHHHHH---
T ss_pred HHHHHHHHHHhCCCCCEEEE----ECCHHHHHHHHHcCCCEEEECCCC----------------H--HHHHHHHHhh---
Confidence 45677788887777777664 433456777889999999999863 2 2345555543
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcch
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLST 624 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt 624 (1429)
+.++.|.+||||. ...+......|+|.+.+|+
T Consensus 249 --~~~v~leaSGGIt-~~~i~~~A~tGVD~IsvGa 280 (300)
T 3l0g_A 249 --NGKSVLEVSGCVN-IRNVRNIALTGVDYISIGC 280 (300)
T ss_dssp --TTSSEEEEESSCC-TTTHHHHHTTTCSEEECGG
T ss_pred --cCceEEEEECCCC-HHHHHHHHHcCCCEEEeCc
Confidence 3479999999994 6778778889999998886
No 218
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=92.44 E-value=0.16 Score=62.86 Aligned_cols=75 Identities=15% Similarity=0.027 Sum_probs=55.6
Q ss_pred HHHHHHHHhcCCcEEEEecCCC-CCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHH-
Q psy12805 537 GVVASGVAKGKAEHIVISGHDG-GTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAAL- 614 (1429)
Q Consensus 537 g~vA~~~akaGaD~I~IsG~~G-GTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla- 614 (1429)
-..|..+.++|++.|++.+.+- |+ ..|..+ ..+.++.+.+ .++||++||+.|..|+.+++.
T Consensus 455 ~e~a~~~~~~Ga~~il~t~~~~dG~---------~~G~d~-~li~~l~~~~-------~iPVIasGGi~s~~d~~~~~~~ 517 (555)
T 1jvn_A 455 WELTRACEALGAGEILLNCIDKDGS---------NSGYDL-ELIEHVKDAV-------KIPVIASSGAGVPEHFEEAFLK 517 (555)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTTT---------CSCCCH-HHHHHHHHHC-------SSCEEECSCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCC---------CCCCCH-HHHHHHHHhC-------CccEEEECCCCCHHHHHHHHHh
Confidence 4578889999999999976431 22 235443 3345554432 689999999999999999987
Q ss_pred hcchhhhcchhHHH
Q psy12805 615 LGADEIGLSTAPLI 628 (1429)
Q Consensus 615 LGAdavg~gt~~L~ 628 (1429)
.||+++-+|++++-
T Consensus 518 ~G~~gvivg~a~~~ 531 (555)
T 1jvn_A 518 TRADACLGAGMFHR 531 (555)
T ss_dssp SCCSEEEESHHHHT
T ss_pred cCChHHHHHHHHHc
Confidence 79999989986543
No 219
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=92.34 E-value=0.38 Score=54.74 Aligned_cols=87 Identities=20% Similarity=0.239 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
+.+.++.+|+..|.+||.|- +.--..+..+.++|+|+|.++... | .-+.++.+.+
T Consensus 185 i~~Av~~ar~~~~~~~IeVE----v~tl~ea~eAl~aGaD~I~LDn~~----------------~--~~l~~av~~~--- 239 (287)
T 3tqv_A 185 IAKAVTKAKKLDSNKVVEVE----VTNLDELNQAIAAKADIVMLDNFS----------------G--EDIDIAVSIA--- 239 (287)
T ss_dssp HHHHHHHHHHHCTTSCEEEE----ESSHHHHHHHHHTTCSEEEEESCC----------------H--HHHHHHHHHH---
T ss_pred HHHHHHHHHhhCCCCcEEEE----eCCHHHHHHHHHcCCCEEEEcCCC----------------H--HHHHHHHHhh---
Confidence 45567777777777888774 322256677889999999998752 1 2355555543
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcch
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLST 624 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt 624 (1429)
+.++.|.+|||| |...+......|+|.+++|+
T Consensus 240 --~~~v~ieaSGGI-t~~~i~~~a~tGVD~IsvGa 271 (287)
T 3tqv_A 240 --RGKVALEVSGNI-DRNSIVAIAKTGVDFISVGA 271 (287)
T ss_dssp --TTTCEEEEESSC-CTTTHHHHHTTTCSEEECSH
T ss_pred --cCCceEEEECCC-CHHHHHHHHHcCCCEEEECh
Confidence 347999999999 47778888889999998886
No 220
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=92.28 E-value=0.35 Score=55.90 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=30.8
Q ss_pred ceEE--EEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 594 RVVL--QADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 594 ~V~L--iasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
++++ ++.|||.|+.|+..++.+|||+|.+|++.+-
T Consensus 240 ~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~ 276 (330)
T 2yzr_A 240 RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFK 276 (330)
T ss_dssp SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHT
T ss_pred CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhc
Confidence 4555 6999999999999999999999999997664
No 221
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=92.27 E-value=0.35 Score=53.13 Aligned_cols=78 Identities=14% Similarity=0.041 Sum_probs=54.9
Q ss_pred ChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHH
Q psy12805 535 GVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAAL 614 (1429)
Q Consensus 535 Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla 614 (1429)
....++..+.++|+|.|.+++.++.. .+.+. . .+..+.+.+ ...++|++.|||++..|+..++.
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~----------~~~~~--~-~~~i~~i~~---~~~ipvi~~ggI~~~~~~~~~~~ 94 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASV----------EKRKT--M-LELVEKVAE---QIDIPFTVGGGIHDFETASELIL 94 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSS----------SHHHH--H-HHHHHHHHT---TCCSCEEEESSCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhh----------cCCcc--c-HHHHHHHHH---hCCCCEEEeCCCCCHHHHHHHHH
Confidence 34556778889999999999876431 11111 1 112222322 23689999999999999999999
Q ss_pred hcchhhhcchhHHH
Q psy12805 615 LGADEIGLSTAPLI 628 (1429)
Q Consensus 615 LGAdavg~gt~~L~ 628 (1429)
.|||.|.+|+.++-
T Consensus 95 ~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 95 RGADKVSINTAAVE 108 (253)
T ss_dssp TTCSEEEESHHHHH
T ss_pred cCCCEEEEChHHHh
Confidence 99999999996653
No 222
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=92.24 E-value=0.37 Score=55.16 Aligned_cols=87 Identities=16% Similarity=0.173 Sum_probs=61.9
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
+.+-++..|+..|..+|.|- +..-..+..+.++|+|+|.++... | ..+.++.+.
T Consensus 195 i~~ai~~~r~~~~~~kI~ve----v~tlee~~eA~~aGaD~I~ld~~~----------------~--e~l~~~v~~---- 248 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEVE----VENLDELDDALKAGADIIMLDNFN----------------T--DQMREAVKR---- 248 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEEE----ESSHHHHHHHHHTTCSEEEESSCC----------------H--HHHHHHHHT----
T ss_pred HHHHHHHHHHhCCCCcEEEE----eCCHHHHHHHHHcCCCEEEECCCC----------------H--HHHHHHHHH----
Confidence 35667788887765456553 332244666789999999997521 1 223333332
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcch
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLST 624 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt 624 (1429)
++.++.|.+|||| |...+...+..|||.+++|+
T Consensus 249 -~~~~~~I~ASGGI-t~~~i~~~a~~GvD~isvGs 281 (296)
T 1qap_A 249 -VNGQARLEVSGNV-TAETLREFAETGVDFISVGA 281 (296)
T ss_dssp -TCTTCCEEECCCS-CHHHHHHHHHTTCSEEECSH
T ss_pred -hCCCCeEEEECCC-CHHHHHHHHHcCCCEEEEeH
Confidence 3457899999999 89999999999999999988
No 223
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=92.22 E-value=0.27 Score=54.42 Aligned_cols=81 Identities=30% Similarity=0.343 Sum_probs=50.6
Q ss_pred EEEeccccCh------HHHHHHHHhcCCcEEEEe-cCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEE
Q psy12805 527 SVKLVSEVGV------GVVASGVAKGKAEHIVIS-GHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQA 599 (1429)
Q Consensus 527 ~VKLv~e~Gv------g~vA~~~akaGaD~I~Is-G~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lia 599 (1429)
.+|+..|.+. ...++-+.++|||+|..| |..+..|++ +..+.. +.+.+. .. ++|-+
T Consensus 135 ~lKvIlEt~~L~~e~i~~a~ria~eaGADfVKTsTG~~~~~gAt------------~~dv~l--~~m~~~-v~--v~VKa 197 (234)
T 1n7k_A 135 VVKVILEAPLWDDKTLSLLVDSSRRAGADIVKTSTGVYTKGGDP------------VTVFRL--ASLAKP-LG--MGVKA 197 (234)
T ss_dssp EEEEECCGGGSCHHHHHHHHHHHHHTTCSEEESCCSSSCCCCSH------------HHHHHH--HHHHGG-GT--CEEEE
T ss_pred eEEEEEeccCCCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCC------------HHHHHH--HHHHHH-HC--CCEEE
Confidence 4477666432 224455788999999976 443212222 111111 001111 12 89999
Q ss_pred cCCcccHHHHHHHHHhcchhhhcch
Q psy12805 600 DGQIRTGFDVVVAALLGADEIGLST 624 (1429)
Q Consensus 600 sGGIrtg~Dv~kAlaLGAdavg~gt 624 (1429)
+||+||..|+...+.+||+-+|.+.
T Consensus 198 aGGirt~~~al~~i~aGa~RiG~S~ 222 (234)
T 1n7k_A 198 SGGIRSGIDAVLAVGAGADIIGTSS 222 (234)
T ss_dssp ESSCCSHHHHHHHHHTTCSEEEETT
T ss_pred ecCCCCHHHHHHHHHcCccccchHH
Confidence 9999999999999999999777665
No 224
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=92.11 E-value=0.56 Score=52.29 Aligned_cols=112 Identities=21% Similarity=0.290 Sum_probs=68.9
Q ss_pred HHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCC-----------C---------cccccccc--
Q psy12805 512 ELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGT-----------G---------ASSWTGIK-- 569 (1429)
Q Consensus 512 qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGT-----------g---------aap~~~~~-- 569 (1429)
+.|+.||+..|+.|+.|.|-.+ ..+.....++++|||.|++-.....+ | ..|...++
T Consensus 75 ~~v~~lr~~~p~~~ldvHLmv~-~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~ 153 (246)
T 3inp_A 75 MVLKALRDYGITAGMDVHLMVK-PVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYV 153 (246)
T ss_dssp HHHHHHHHHTCCSCEEEEEECS-SCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTT
T ss_pred HHHHHHHHhCCCCeEEEEEeeC-CHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Confidence 4677888887788999988754 33444566788899988875332110 0 01111111
Q ss_pred ------------c---cCC---C-hHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 570 ------------N---AGL---P-WELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 570 ------------~---~Gi---P-~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
+ .|. | ++.-+.++.+.+.++|+ ++.|.++|||. ...+..++.+|||.+-+|++.+
T Consensus 154 l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~--~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf 227 (246)
T 3inp_A 154 ESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDR--DILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIF 227 (246)
T ss_dssp GGGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTS--CCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHH
T ss_pred HhcCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCC--CeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHh
Confidence 0 121 2 22334455554444443 47899999999 5678889999999998887433
No 225
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=92.05 E-value=0.59 Score=52.39 Aligned_cols=108 Identities=16% Similarity=0.033 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+++.+++..+|+. +..++.=+.+......+ ..+++...+++.+....|.||... ...-+...-+.++.+.
T Consensus 134 e~~~~~~~~~~~~--g~~~i~l~~p~t~~~~i-~~i~~~~~g~v~~~s~~G~tG~~~-----~~~~~~~~~i~~lr~~-- 203 (268)
T 1qop_A 134 EESAPFRQAALRH--NIAPIFICPPNADDDLL-RQVASYGRGYTYLLSRSGVTGAEN-----RGALPLHHLIEKLKEY-- 203 (268)
T ss_dssp GGCHHHHHHHHHT--TCEEECEECTTCCHHHH-HHHHHHCCSCEEEESSSSCCCSSS-----CC--CCHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHc--CCcEEEEECCCCCHHHH-HHHHhhCCCcEEEEecCCcCCCcc-----CCCchHHHHHHHHHhc--
Confidence 5566777777775 34444433333333332 334444455565545556666431 1122233334444432
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHh
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITM 630 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~al 630 (1429)
.+++|+++|||+|+.++.+++..|||.|-+|++.+-..
T Consensus 204 -----~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~~~ 241 (268)
T 1qop_A 204 -----HAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKII 241 (268)
T ss_dssp -----TCCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred -----cCCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhhH
Confidence 15789999999999999999999999999999776644
No 226
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=92.01 E-value=0.25 Score=54.28 Aligned_cols=76 Identities=16% Similarity=0.035 Sum_probs=53.7
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc
Q psy12805 537 GVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG 616 (1429)
Q Consensus 537 g~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG 616 (1429)
-..+..+.+.|++.|.+.+.. .+|. ..|..+ ..+.++.+.+ ++++++.|||++..|+.+++..|
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~-~~g~-------~~g~~~-~~i~~l~~~~-------~ipvia~GGI~~~~d~~~~~~~G 218 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMD-RDGT-------KEGYDL-RLTRMVAEAV-------GVPVIASGGAGRMEHFLEAFQAG 218 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETT-TTTT-------CSCCCH-HHHHHHHHHC-------SSCEEEESCCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEeccc-CCCC-------cCCCCH-HHHHHHHHHc-------CCCEEEeCCCCCHHHHHHHHHCC
Confidence 345677888999999887532 1111 234433 3334444332 58999999999999999999999
Q ss_pred chhhhcchhHHH
Q psy12805 617 ADEIGLSTAPLI 628 (1429)
Q Consensus 617 Adavg~gt~~L~ 628 (1429)
|++|-+|++++-
T Consensus 219 adgv~vgsal~~ 230 (252)
T 1ka9_F 219 AEAALAASVFHF 230 (252)
T ss_dssp CSEEEESHHHHT
T ss_pred CHHHHHHHHHHc
Confidence 999999986654
No 227
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=91.99 E-value=0.26 Score=52.45 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=29.6
Q ss_pred ceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 594 RVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 594 ~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
+++++++|||. ..++..++.+||+.|.+|++.+
T Consensus 150 ~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~ 182 (205)
T 1wa3_A 150 NVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALV 182 (205)
T ss_dssp TCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHH
T ss_pred CCcEEEcCCCC-HHHHHHHHHCCCCEEEECcccc
Confidence 68999999996 7899999999999999998654
No 228
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=91.67 E-value=0.64 Score=53.63 Aligned_cols=88 Identities=18% Similarity=0.178 Sum_probs=65.1
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
+.+.++..|+..|..+|.|- +.--..+..+.++|+|+|.|+... ...+.++.+.+
T Consensus 218 i~~Av~~ar~~~p~~kIeVE----Vdtldea~eAl~aGaD~I~LDn~~------------------~~~l~~av~~l--- 272 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEVE----TETLAELEEAISAGADIIMLDNFS------------------LEMMREAVKIN--- 272 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEEE----ESSHHHHHHHHHTTCSEEEEESCC------------------HHHHHHHHHHH---
T ss_pred HHHHHHHHHHhCCCCeEEEE----ECCHHHHHHHHHcCCCEEEECCCC------------------HHHHHHHHHHh---
Confidence 56678888888888777774 322245667888999999998752 13355555543
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchh
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTA 625 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~ 625 (1429)
+.++.|.+||||. ...+......|+|.+++|+.
T Consensus 273 --~~~v~ieaSGGIt-~~~I~~~a~tGVD~isvGal 305 (320)
T 3paj_A 273 --AGRAALENSGNIT-LDNLKECAETGVDYISVGAL 305 (320)
T ss_dssp --TTSSEEEEESSCC-HHHHHHHHTTTCSEEECTHH
T ss_pred --CCCCeEEEECCCC-HHHHHHHHHcCCCEEEECce
Confidence 3579999999996 66777778899999999883
No 229
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=91.67 E-value=0.22 Score=56.26 Aligned_cols=119 Identities=11% Similarity=0.075 Sum_probs=69.5
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEE--Eec--cccChHHHHHHHHhcCCcEEEEecCCCCCC-----------c------cc
Q psy12805 506 SIEDLAELIYDLKCANPNARISV--KLV--SEVGVGVVASGVAKGKAEHIVISGHDGGTG-----------A------SS 564 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~V--KLv--~e~Gvg~vA~~~akaGaD~I~IsG~~GGTg-----------a------ap 564 (1429)
+.+++.+++.++|+. ++.||++ ... -..|....+..+.++|+|.+++-+..-.+- . +|
T Consensus 75 ~~~~~~~~v~~ir~~-~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap 153 (271)
T 1ujp_A 75 SVQGALELVREVRAL-TEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAP 153 (271)
T ss_dssp CHHHHHHHHHHHHHH-CCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECT
T ss_pred CHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCC
Confidence 567788889999988 5789988 111 112666677778889999666544321110 0 00
Q ss_pred ccccc--------------------ccCCChHH--HHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 565 WTGIK--------------------NAGLPWEL--GVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 565 ~~~~~--------------------~~GiP~~l--aL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
.+..+ ..|..... .+.+..+.+++. .+++|++.|||+|+.++.++ .|||.|-+
T Consensus 154 ~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~---~~~Pv~vGfGI~t~e~a~~~--~~ADgVIV 228 (271)
T 1ujp_A 154 TSTDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKAR---TALPVAVGFGVSGKATAAQA--AVADGVVV 228 (271)
T ss_dssp TCCHHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTT---CCSCEEEESCCCSHHHHHHH--TTSSEEEE
T ss_pred CCCHHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhh---cCCCEEEEcCCCCHHHHHHh--cCCCEEEE
Confidence 00000 00110000 001111222222 36899999999999999985 99999999
Q ss_pred chhHHHHh
Q psy12805 623 STAPLITM 630 (1429)
Q Consensus 623 gt~~L~al 630 (1429)
|++..-..
T Consensus 229 GSAi~~~~ 236 (271)
T 1ujp_A 229 GSALVRAL 236 (271)
T ss_dssp CHHHHHHH
T ss_pred ChHHhccc
Confidence 99766543
No 230
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=91.66 E-value=0.12 Score=56.75 Aligned_cols=77 Identities=18% Similarity=0.136 Sum_probs=53.6
Q ss_pred hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh
Q psy12805 536 VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL 615 (1429)
Q Consensus 536 vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL 615 (1429)
...++..+.++|+|.|.+++..+.. .+.+. .+..+ +.+.+ ...++|++.|||++..|+..++.+
T Consensus 33 ~~~~a~~~~~~Gad~i~v~d~~~~~----------~~~~~--~~~~i-~~i~~---~~~iPvi~~Ggi~~~~~~~~~~~~ 96 (252)
T 1ka9_F 33 PVEAARAYDEAGADELVFLDISATH----------EERAI--LLDVV-ARVAE---RVFIPLTVGGGVRSLEDARKLLLS 96 (252)
T ss_dssp HHHHHHHHHHHTCSCEEEEECCSST----------TCHHH--HHHHH-HHHHT---TCCSCEEEESSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEcCCccc----------cCccc--cHHHH-HHHHH---hCCCCEEEECCcCCHHHHHHHHHc
Confidence 4456777888999999998764321 11111 11112 22222 136899999999999999999999
Q ss_pred cchhhhcchhHHH
Q psy12805 616 GADEIGLSTAPLI 628 (1429)
Q Consensus 616 GAdavg~gt~~L~ 628 (1429)
|||.|.+|+.++-
T Consensus 97 Gad~V~lg~~~l~ 109 (252)
T 1ka9_F 97 GADKVSVNSAAVR 109 (252)
T ss_dssp TCSEEEECHHHHH
T ss_pred CCCEEEEChHHHh
Confidence 9999999997663
No 231
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=91.50 E-value=0.54 Score=53.74 Aligned_cols=88 Identities=16% Similarity=0.146 Sum_probs=62.0
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
+.+-++..|+..|.++|.|- +.--..+..+.++|+|+|.++... | ..+.++.+.+
T Consensus 196 i~~Av~~~r~~~p~~~ieVE----vdtlde~~eAl~aGaD~I~LDn~~----------------~--~~l~~av~~i--- 250 (298)
T 3gnn_A 196 VGEALDAAFALNAEVPVQIE----VETLDQLRTALAHGARSVLLDNFT----------------L--DMMRDAVRVT--- 250 (298)
T ss_dssp HHHHHHHHHHHC--CCCEEE----ESSHHHHHHHHHTTCEEEEEESCC----------------H--HHHHHHHHHH---
T ss_pred HHHHHHHHHHhCCCCCEEEE----eCCHHHHHHHHHcCCCEEEECCCC----------------H--HHHHHHHHHh---
Confidence 45677788888776666555 322245677888999999999853 1 3345555443
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchh
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTA 625 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~ 625 (1429)
+.++.|.+||||. ...+......|+|.+++|+.
T Consensus 251 --~~~v~ieaSGGI~-~~~i~~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 251 --EGRAVLEVSGGVN-FDTVRAIAETGVDRISIGAL 283 (298)
T ss_dssp --TTSEEEEEESSCS-TTTHHHHHHTTCSEEECGGG
T ss_pred --CCCCeEEEEcCCC-HHHHHHHHHcCCCEEEECCe
Confidence 3579999999994 66677778899999999883
No 232
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=91.37 E-value=0.4 Score=54.19 Aligned_cols=91 Identities=19% Similarity=0.178 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhCCC-CeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHh
Q psy12805 510 LAELIYDLKCANPN-ARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLAL 588 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~-~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~ 588 (1429)
..+-++..|+..|. .+|.|- +..-..+..+.++|+|+|.++..+ ...+.++.+.+..
T Consensus 168 ~~~ai~~~r~~~~~~~~i~ve----v~tlee~~~A~~aGaD~I~ld~~~------------------~~~l~~~v~~l~~ 225 (273)
T 2b7n_A 168 LKSFLTHARKNLPFTAKIEIE----CESFEEAKNAMNAGADIVMCDNLS------------------VLETKEIAAYRDA 225 (273)
T ss_dssp HHHHHHHHGGGSCTTCCEEEE----ESSHHHHHHHHHHTCSEEEEETCC------------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCceEEEE----cCCHHHHHHHHHcCCCEEEECCCC------------------HHHHHHHHHHhhc
Confidence 35567778877754 466663 332244666778999999997521 2345555555532
Q ss_pred cCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchh
Q psy12805 589 NNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTA 625 (1429)
Q Consensus 589 ~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~ 625 (1429)
++ .+++|.++||| |...+...+..|||.+++|+.
T Consensus 226 -~~-~~~~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~ 259 (273)
T 2b7n_A 226 -HY-PFVLLEASGNI-SLESINAYAKSGVDAISVGAL 259 (273)
T ss_dssp -HC-TTCEEEEESSC-CTTTHHHHHTTTCSEEECTHH
T ss_pred -cC-CCcEEEEECCC-CHHHHHHHHHcCCcEEEEcHH
Confidence 12 35899999999 889999999999999999985
No 233
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=91.36 E-value=0.57 Score=53.31 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeccccCh----H---HHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHH
Q psy12805 507 IEDLAELIYDLKCANPNARISVKLVSEVGV----G---VVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGV 579 (1429)
Q Consensus 507 iedL~qlI~~Lk~~~~~~pV~VKLv~e~Gv----g---~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL 579 (1429)
.+.+.+.|..++++.+ +..+|+..|.+. . .....+.++|||+|.-|-..+..||. ++.+..+
T Consensus 134 ~~~V~~eI~~v~~a~~--~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~~~gAT---------~edV~lM 202 (297)
T 4eiv_A 134 ESRIRLLVSEVKKVVG--PKTLKVVLSGGELQGGDIISRAAVAALEGGADFLQTSSGLGATHAT---------MFTVHLI 202 (297)
T ss_dssp HHHHHHHHHHHHHHHT--TSEEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCC---------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEcCCCCCCCCCC---------HHHHHHH
Confidence 3557777888888763 457898887642 1 12344678999999976333333333 3333333
Q ss_pred HHHHHH--------HHhcCC------CCceEEEEc-CCcccHHHHHHHHH
Q psy12805 580 AETHQV--------LALNNL------RSRVVLQAD-GQIRTGFDVVVAAL 614 (1429)
Q Consensus 580 ~ev~q~--------L~~~gL------R~~V~Lias-GGIrtg~Dv~kAla 614 (1429)
.++.+. .+..|+ ..++.|=++ |||||..|+...+.
T Consensus 203 ~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~ 252 (297)
T 4eiv_A 203 SIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLMQ 252 (297)
T ss_dssp HHHHHHHHCC------------------CCEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHhccccccccccccccccccCCceeEEecCCCCCCHHHHHHHHH
Confidence 333321 112233 246889999 99999999988877
No 234
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=91.32 E-value=0.18 Score=55.15 Aligned_cols=76 Identities=22% Similarity=0.157 Sum_probs=55.2
Q ss_pred ChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHH
Q psy12805 535 GVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAAL 614 (1429)
Q Consensus 535 Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla 614 (1429)
....++..+.++|+|.|.+.+.++.. .+.+....+.++.+. ..+++++.|||+++.++-.++.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~----------~~~~~~~~i~~i~~~-------~~ipv~v~ggi~~~~~~~~~l~ 94 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAF----------GRGSNHELLAEVVGK-------LDVQVELSGGIRDDESLAAALA 94 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHT----------TSCCCHHHHHHHHHH-------CSSEEEEESSCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccc----------cCCChHHHHHHHHHh-------cCCcEEEECCCCCHHHHHHHHH
Confidence 45567888899999999998765431 112222333433332 2589999999999999999999
Q ss_pred hcchhhhcchhHH
Q psy12805 615 LGADEIGLSTAPL 627 (1429)
Q Consensus 615 LGAdavg~gt~~L 627 (1429)
+|||.|.+++..+
T Consensus 95 ~Gad~V~lg~~~l 107 (244)
T 2y88_A 95 TGCARVNVGTAAL 107 (244)
T ss_dssp TTCSEEEECHHHH
T ss_pred cCCCEEEECchHh
Confidence 9999999998654
No 235
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=90.81 E-value=0.045 Score=60.40 Aligned_cols=74 Identities=22% Similarity=0.230 Sum_probs=0.0
Q ss_pred HHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcch
Q psy12805 539 VASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGAD 618 (1429)
Q Consensus 539 vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAd 618 (1429)
.+..+.++|++.|.+++..-. |. ..|..+ ..+.++.+. .++++|+.|||+|..|+.+++.+||+
T Consensus 161 ~a~~~~~~G~~~i~~t~~~~~-g~-------~~g~~~-~~~~~i~~~-------~~iPvia~GGI~~~~d~~~~~~~Gad 224 (247)
T 3tdn_A 161 WVVEVEKRGAGEILLTSIDRD-GT-------KSGYDT-EMIRFVRPL-------TTLPIIASGGAGKMEHFLEAFLRGAD 224 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCCCEEEEecccCC-CC-------cCCCCH-HHHHHHHHh-------CCCCEEEECCCCCHHHHHHHHHcCCc
Confidence 456677889999988764211 10 123222 223333332 26899999999999999999999999
Q ss_pred hhhcchhHHH
Q psy12805 619 EIGLSTAPLI 628 (1429)
Q Consensus 619 avg~gt~~L~ 628 (1429)
+|.+|++.|-
T Consensus 225 ~v~vg~al~~ 234 (247)
T 3tdn_A 225 KVSINTAAVE 234 (247)
T ss_dssp ----------
T ss_pred HhhccHHHHc
Confidence 9999986553
No 236
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=90.32 E-value=0.24 Score=54.19 Aligned_cols=76 Identities=21% Similarity=0.161 Sum_probs=54.4
Q ss_pred ChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHH
Q psy12805 535 GVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAAL 614 (1429)
Q Consensus 535 Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla 614 (1429)
....++..+.++|+|.|.|.+.++.. .+.+....+.++.+. ..+++++.|||+++.++-.++.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~----------~~~~~~~~i~~i~~~-------~~ipv~v~ggI~~~~~~~~~l~ 95 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAF----------GTGDNRALIAEVAQA-------MDIKVELSGGIRDDDTLAAALA 95 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHH----------TSCCCHHHHHHHHHH-------CSSEEEEESSCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhh----------cCCChHHHHHHHHHh-------cCCcEEEECCcCCHHHHHHHHH
Confidence 45556788889999999998765421 122221233333322 2589999999999999999999
Q ss_pred hcchhhhcchhHH
Q psy12805 615 LGADEIGLSTAPL 627 (1429)
Q Consensus 615 LGAdavg~gt~~L 627 (1429)
+|||.|.+++..+
T Consensus 96 ~Gad~V~lg~~~l 108 (244)
T 1vzw_A 96 TGCTRVNLGTAAL 108 (244)
T ss_dssp TTCSEEEECHHHH
T ss_pred cCCCEEEECchHh
Confidence 9999999888544
No 237
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=89.91 E-value=0.83 Score=53.62 Aligned_cols=96 Identities=16% Similarity=0.139 Sum_probs=66.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHH
Q psy12805 505 YSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQ 584 (1429)
Q Consensus 505 ~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q 584 (1429)
.+++++.+.|..+|+. +..|+.+-+.... ...+..+.++|+|+|+|+-..|.. -.+...+.++.+
T Consensus 78 ~s~e~~~~~I~~vk~~-~~~pvga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~------------~~~~~~i~~i~~ 142 (361)
T 3khj_A 78 MDMESQVNEVLKVKNS-GGLRVGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHS------------LNIIRTLKEIKS 142 (361)
T ss_dssp SCHHHHHHHHHHHHHT-TCCCCEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSB------------HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-cCceEEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCc------------HHHHHHHHHHHH
Confidence 3678888999999876 4788988875433 456677899999999997443320 011222333332
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcc
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLS 623 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~g 623 (1429)
.+ .+++++ |.+.|..++..++.+|||++.+|
T Consensus 143 ~~-------~~~Viv-g~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 143 KM-------NIDVIV-GNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp HC-------CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred hc-------CCcEEE-ccCCCHHHHHHHHHcCcCEEEEe
Confidence 21 366765 67889999999999999999765
No 238
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=89.79 E-value=0.55 Score=54.95 Aligned_cols=119 Identities=18% Similarity=0.094 Sum_probs=75.8
Q ss_pred ccccCCCC--CCCC--CHHH----HHHHHHHHHHhCCCCeEEEEecccc---C------h---HHHHHHHHhcCCcEEEE
Q psy12805 494 GLISPPPH--HDIY--SIED----LAELIYDLKCANPNARISVKLVSEV---G------V---GVVASGVAKGKAEHIVI 553 (1429)
Q Consensus 494 ~LisP~~h--~di~--sied----L~qlI~~Lk~~~~~~pV~VKLv~e~---G------v---g~vA~~~akaGaD~I~I 553 (1429)
..+||-.. .|-| |+|. +.++|+.+|+..+.-+|.||+.+.. | . ...+..+.+.|+++|.+
T Consensus 181 QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (358)
T 4a3u_A 181 EFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGM 260 (358)
T ss_dssp HHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEE
T ss_pred hceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHHHHHHHHhhhccCcccccc
Confidence 34566433 3666 7776 7888999999887778999998742 1 1 12455677889999999
Q ss_pred ecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc-chhhhcchhHHH
Q psy12805 554 SGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG-ADEIGLSTAPLI 628 (1429)
Q Consensus 554 sG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG-Adavg~gt~~L~ 628 (1429)
+...-.. .. ....-.+.. .++.+. ...+++ .||+.|+.++-+++.-| ||.|++|++++.
T Consensus 261 ~~~~~~~-~~----~~~~~~~~a---~~ik~~-------~~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~la 320 (358)
T 4a3u_A 261 REGAVDG-TF----GKTDQPKLS---PEIRKV-------FKPPLV-LNQDYTFETAQAALDSGVADAISFGRPFIG 320 (358)
T ss_dssp ECCBTTC-SS----SBCSSCCCH---HHHHHH-------CCSCEE-EESSCCHHHHHHHHHHTSCSEEEESHHHHH
T ss_pred ccccccC-cc----cccccHHHH---HHHHHh-------cCCcEE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHh
Confidence 8542111 00 001111211 222222 124454 57889999998999999 899999997665
No 239
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=89.74 E-value=2.8 Score=45.77 Aligned_cols=67 Identities=22% Similarity=0.151 Sum_probs=50.9
Q ss_pred HHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhh
Q psy12805 541 SGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEI 620 (1429)
Q Consensus 541 ~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdav 620 (1429)
..+++|||++|-.- -|. ++++|.|-...+.++++.+..+|.+. .|+ ...+|+..+|..++++|||.+
T Consensus 117 ~~Aa~AGa~yISPf--vgR--------i~d~~~dG~~~v~~i~~~~~~~~~~t--~il-aAS~R~~~~v~~~a~~G~d~~ 183 (212)
T 3r8r_A 117 LLAARAGATYVSPF--LGR--------LDDIGHNGLDLISEVKQIFDIHGLDT--QII-AASIRHPQHVTEAALRGAHIG 183 (212)
T ss_dssp HHHHHHTCSEEEEB--HHH--------HHHTTSCHHHHHHHHHHHHHHHTCCC--EEE-EBSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHcCCeEEEec--cch--------hhhcCCChHHHHHHHHHHHHHcCCCC--EEE-EecCCCHHHHHHHHHcCCCEE
Confidence 33677788776541 111 67888998899999999999888753 444 357999999999999998865
No 240
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=89.71 E-value=0.61 Score=52.32 Aligned_cols=92 Identities=13% Similarity=0.081 Sum_probs=61.3
Q ss_pred ceEEEccccccccHHHHHHhCCCCccccc---------------------------cccc------hhhccchHHHHHHH
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPLGNII---------------------------PKWN------DLIYHNNWSEALNQ 1289 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V~~iL---------------------------p~~d------~lvf~~e~~~al~~ 1289 (1429)
+++|||||..|+..+..+++.|.+|..+= +.+. ......++.+.+.+
T Consensus 5 ~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (357)
T 4a9w_A 5 DVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLAQ 84 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHHH
Confidence 69999999999999999998888871111 1000 00011467778888
Q ss_pred HHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEecccc
Q psy12805 1290 LLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1290 ~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~ 1339 (1429)
.+++.+ +..+.+++.++.. ++.+..+...+ . ++++|.||+|+|..
T Consensus 85 ~~~~~~~~~~~~~~v~~i~~~---~~~~~~v~~~~-g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 85 YEQKYALPVLRPIRVQRVSHF---GERLRVVARDG-R-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHTTCCEECSCCEEEEEEE---TTEEEEEETTS-C-EEEEEEEEECCCSG
T ss_pred HHHHcCCEEEcCCEEEEEEEC---CCcEEEEEeCC-C-EEEeCEEEECCCCC
Confidence 887777 4567788888653 33443123333 3 79999999999963
No 241
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=89.65 E-value=1.2 Score=50.42 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=29.8
Q ss_pred ceEE--EEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 594 RVVL--QADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 594 ~V~L--iasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
+++| |+.|||.|+.|+..++.+|||.|.+|++.+-
T Consensus 198 ~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~ 234 (291)
T 3o07_A 198 KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFK 234 (291)
T ss_dssp SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGG
T ss_pred CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhC
Confidence 4555 5689999999999999999999999996553
No 242
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=89.60 E-value=0.91 Score=53.57 Aligned_cols=99 Identities=21% Similarity=0.141 Sum_probs=66.9
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccC--CChHHHHHHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAG--LPWELGVAETH 583 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~G--iP~~laL~ev~ 583 (1429)
+.+.+.++|+.+++. +.++.+++.+. .....+..+.++|+|+|.+++...- . .+.+ .+|.. +.++.
T Consensus 140 d~~~~~~~i~~~~~~--g~~v~~~v~~~-~~~e~a~~~~~agad~i~i~~~~~~---~-----~~~~~~~~~~~-i~~l~ 207 (393)
T 2qr6_A 140 DTELLSERIAQVRDS--GEIVAVRVSPQ-NVREIAPIVIKAGADLLVIQGTLIS---A-----EHVNTGGEALN-LKEFI 207 (393)
T ss_dssp CHHHHHHHHHHHHHT--TSCCEEEECTT-THHHHHHHHHHTTCSEEEEECSSCC---S-----SCCCC-----C-HHHHH
T ss_pred CHHHHHHHHHHHhhc--CCeEEEEeCCc-cHHHHHHHHHHCCCCEEEEeCCccc---c-----ccCCCcccHHH-HHHHH
Confidence 467788889999886 68899987653 3444567777899999998754210 0 0111 13332 33333
Q ss_pred HHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcch
Q psy12805 584 QVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLST 624 (1429)
Q Consensus 584 q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt 624 (1429)
+.. .++|++ ||+.|..|+..++.+|||++-+|+
T Consensus 208 ~~~-------~~pvi~-ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 208 GSL-------DVPVIA-GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp HHC-------SSCEEE-ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred Hhc-------CCCEEE-CCcCCHHHHHHHHHcCCCEEEECC
Confidence 321 578888 999999999999999999987765
No 243
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=89.52 E-value=0.14 Score=56.02 Aligned_cols=77 Identities=16% Similarity=0.015 Sum_probs=54.2
Q ss_pred ChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHH
Q psy12805 535 GVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAAL 614 (1429)
Q Consensus 535 Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla 614 (1429)
..-.+|..+.++|+|.|.+++..... ...+ +....+.+ +. ...++|++.|||++..|+..++.
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~~--------~~~~-~~~~~i~~----i~----~~~ipvi~~Ggi~~~~~~~~~~~ 93 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNAI--------ENSG-ENLPVLEK----LS----EFAEHIQIGGGIRSLDYAEKLRK 93 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHHH--------HCCC-TTHHHHHH----GG----GGGGGEEEESSCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecccccc--------cCCc-hhHHHHHH----HH----hcCCcEEEECCCCCHHHHHHHHH
Confidence 45567888899999999998653210 0111 11222222 11 13689999999999999999999
Q ss_pred hcchhhhcchhHHH
Q psy12805 615 LGADEIGLSTAPLI 628 (1429)
Q Consensus 615 LGAdavg~gt~~L~ 628 (1429)
+|||.|.+|+.++-
T Consensus 94 ~Gad~V~lg~~~l~ 107 (241)
T 1qo2_A 94 LGYRRQIVSSKVLE 107 (241)
T ss_dssp TTCCEEEECHHHHH
T ss_pred CCCCEEEECchHhh
Confidence 99999999997664
No 244
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=89.40 E-value=0.7 Score=52.89 Aligned_cols=90 Identities=17% Similarity=0.127 Sum_probs=62.0
Q ss_pred HHHHHHHHHhCCC-CeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 511 AELIYDLKCANPN-ARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 511 ~qlI~~Lk~~~~~-~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
.+-+...|+..|. ++|.|- +..-..+..+.++|+|+|.++..+ +..+.++.+.+..
T Consensus 184 ~~ai~~~r~~~~~~~~i~ve----v~tlee~~~A~~aGaD~I~ld~~~------------------~~~l~~~v~~l~~- 240 (299)
T 2jbm_A 184 EKAVRAARQAADFALKVEVE----CSSLQEAVQAAEAGADLVLLDNFK------------------PEELHPTATVLKA- 240 (299)
T ss_dssp HHHHHHHHHHHTTTSCEEEE----ESSHHHHHHHHHTTCSEEEEESCC------------------HHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhCCcCCeEEEe----cCCHHHHHHHHHcCCCEEEECCCC------------------HHHHHHHHHHhhc-
Confidence 4566677766553 566663 322244566778999999997521 2334555555532
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchh
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTA 625 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~ 625 (1429)
+. .+++|.+|||| |...+...+..|||.+++|+.
T Consensus 241 ~~-~~~~I~ASGGI-t~~ni~~~~~aGaD~i~vGs~ 274 (299)
T 2jbm_A 241 QF-PSVAVEASGGI-TLDNLPQFCGPHIDVISMGML 274 (299)
T ss_dssp HC-TTSEEEEESSC-CTTTHHHHCCTTCCEEECTHH
T ss_pred cC-CCeeEEEECCC-CHHHHHHHHHCCCCEEEEChh
Confidence 11 35899999999 899999999999999999983
No 245
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=88.96 E-value=0.31 Score=54.00 Aligned_cols=76 Identities=17% Similarity=0.046 Sum_probs=53.2
Q ss_pred hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh
Q psy12805 536 VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL 615 (1429)
Q Consensus 536 vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL 615 (1429)
.-.++..+.++|+|.|.+++..... ...| +....+.+ +.+. ..++|++.||+++..|+..++.+
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~--------~~~g-~~~~~i~~----i~~~---~~iPvi~~ggi~~~~~i~~~~~~ 95 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDG--------TKSG-YDTEMIRF----VRPL---TTLPIIASGGAGKMEHFLEAFLA 95 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSS--------CSSC-CCHHHHHH----HGGG---CCSCEEEESCCCSTHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEEecCccc--------CCCc-ccHHHHHH----HHHh---cCCCEEEECCCCCHHHHHHHHHc
Confidence 4557788899999999998765321 0112 12222222 2221 26899999999999999999999
Q ss_pred cchhhhcchhHH
Q psy12805 616 GADEIGLSTAPL 627 (1429)
Q Consensus 616 GAdavg~gt~~L 627 (1429)
|||.|-+++.++
T Consensus 96 Gad~v~lg~~~~ 107 (266)
T 2w6r_A 96 GADKALAASVFH 107 (266)
T ss_dssp TCSEEECCCCC-
T ss_pred CCcHhhhhHHHH
Confidence 999999998666
No 246
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=88.89 E-value=1 Score=47.93 Aligned_cols=100 Identities=15% Similarity=0.039 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEE-EEecCCCCCCccccccccccCCChHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHI-VISGHDGGTGASSWTGIKNAGLPWELGVAETHQVL 586 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I-~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L 586 (1429)
+.+.+.++.+++. +.++.+-+.+.....+.+..+.+.|+|+| ..-+..++ ..|.+.. . ..+.+..
T Consensus 90 ~~~~~~~~~~~~~--g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~~~~~~----------~~g~~~~-~-~~i~~~~ 155 (207)
T 3ajx_A 90 STIAGAVKAAQAH--NKGVVVDLIGIEDKATRAQEVRALGAKFVEMHAGLDEQ----------AKPGFDL-N-GLLAAGE 155 (207)
T ss_dssp HHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHTTCSEEEEECCHHHH----------TSTTCCT-H-HHHHHHH
T ss_pred HHHHHHHHHHHHc--CCceEEEEecCCChHHHHHHHHHhCCCEEEEEeccccc----------ccCCCch-H-HHHHHhh
Confidence 4566666777664 45565654321123344455667799999 44333211 1121111 1 2233322
Q ss_pred HhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 587 ALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 587 ~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
.. +++++++|||+ ..++..++..|||.+.+|++.+
T Consensus 156 ~~-----~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI~ 190 (207)
T 3ajx_A 156 KA-----RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAIY 190 (207)
T ss_dssp HH-----TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHHH
T ss_pred CC-----CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeecc
Confidence 11 47899999998 6778888999999999998654
No 247
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=88.74 E-value=0.88 Score=56.23 Aligned_cols=71 Identities=13% Similarity=0.171 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchh-hhhhccCccccCC
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPER-YIANELDLTLDPR 1356 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~-~Lle~lGLeld~~ 1356 (1429)
++.+.+.+.+++.| +.++.+++.++.. ++.+..+...++ ++++||.||+|+|..+... .++...|+++...
T Consensus 221 ~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~---~~~v~gV~l~~G-~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~~~~ 294 (549)
T 3nlc_A 221 TMIEKMRATIIELGGEIRFSTRVDDLHME---DGQITGVTLSNG-EEIKSRHVVLAVGHSARDTFEMLHERGVYMEAK 294 (549)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEES---SSBEEEEEETTS-CEEECSCEEECCCTTCHHHHHHHHHTTCCCEEC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEe---CCEEEEEEECCC-CEEECCEEEECCCCChhhHHHHHHHcCCCcccc
Confidence 45556666677776 5678888888652 344443444443 3799999999999984321 3466777766543
No 248
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=88.58 E-value=0.68 Score=51.37 Aligned_cols=96 Identities=10% Similarity=0.095 Sum_probs=62.4
Q ss_pred ceEEEccccccccHHHHHHhCCCCccccccc-------------cch--hhccchHHHHHHHHHHhCC--CCCCcEEEEE
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPLGNIIPK-------------WND--LIYHNNWSEALNQLLQTNN--FPAGIKTVKV 1305 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~-------------~d~--lvf~~e~~~al~~~Le~~G--~~~gv~v~~V 1305 (1429)
+++|||+|..|+..+..+++.|.+|..+-+. +.. .....++.+.+.+.+++.+ +..+.++..+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 5899999999999999998888877322111 100 0112356777777777776 5566677777
Q ss_pred EEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1306 EWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1306 e~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+....++.+... ..+. +++.+|.|++|+|..|
T Consensus 83 ~~~~~~~~~~~v~-~~~g-~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 83 IPAAVEGGLHQIE-TASG-AVLKARSIIVATGAKW 115 (310)
T ss_dssp ECCSSTTCCEEEE-ETTS-CEEEEEEEEECCCEEE
T ss_pred EecccCCceEEEE-ECCC-CEEEeCEEEECcCCCc
Confidence 5532222344433 3333 4689999999999874
No 249
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=88.17 E-value=0.57 Score=56.85 Aligned_cols=103 Identities=12% Similarity=0.058 Sum_probs=64.7
Q ss_pred CCCceEEEccccccccHHHHHHhCCCCcccc-----c------cccc-------h----------------hhccchHHH
Q psy12805 1240 VRKGLRIQAARCMECGVPFCQSSHGCPLGNI-----I------PKWN-------D----------------LIYHNNWSE 1285 (1429)
Q Consensus 1240 ~pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~i-----L------p~~d-------~----------------lvf~~e~~~ 1285 (1429)
.+.+++|||||..|+.+|..++..|.+|..+ + ..+. . .+...++.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~ 170 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQL 170 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHH
Confidence 3568999999999999999999888877111 0 0000 0 011145667
Q ss_pred HHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEe---CCCeeEEEecEEEEeccccCch
Q psy12805 1286 ALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEV---PNSEKIFKCDLVLLAMGFLGPE 1342 (1429)
Q Consensus 1286 al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~---~gse~~ieaDlVLlAiG~~pp~ 1342 (1429)
.+.+.+++.| +.++.+++.++...+.+..+..... +|+.+++.+|.||+|+|..+..
T Consensus 171 ~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 171 LLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 7777777777 4567888888643111223333332 2322468999999999987543
No 250
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=87.98 E-value=0.57 Score=52.32 Aligned_cols=96 Identities=10% Similarity=0.059 Sum_probs=63.3
Q ss_pred CCceEEEccccccccHHHHHHhCCCCccccc----------------------cccchhhccchHHHHHHHHHHhCC--C
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGCPLGNII----------------------PKWNDLIYHNNWSEALNQLLQTNN--F 1296 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iL----------------------p~~d~lvf~~e~~~al~~~Le~~G--~ 1296 (1429)
..+++|||||..|+..+..+++.|.+|..+= |.+...+...++.+.+.+.++..+ +
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 101 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEI 101 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEE
Confidence 4679999999999999999998888872111 122211233477788888888777 3
Q ss_pred CCCcEEEEEEEeecCCCceEEEEe-CCCeeEEEecEEEEeccccC
Q psy12805 1297 PAGIKTVKVEWTKDATGRWKMDEV-PNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1297 ~~gv~v~~Ve~~k~~~G~~~~v~~-~gse~~ieaDlVLlAiG~~p 1340 (1429)
..+. +..+.. .++.+..... .++..++.+|.|++|+|..|
T Consensus 102 ~~~~-v~~i~~---~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 102 ITET-VSKVDL---SSKPFKLWTEFNEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp ECSC-EEEEEC---SSSSEEEEETTCSSSCCEEEEEEEECCCEEE
T ss_pred EEeE-EEEEEE---cCCEEEEEEEecCCCcEEEeCEEEECcCCCc
Confidence 4455 556643 2344443332 12345789999999999874
No 251
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=87.90 E-value=0.93 Score=48.75 Aligned_cols=33 Identities=18% Similarity=0.135 Sum_probs=29.6
Q ss_pred ceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 594 RVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 594 ~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
+++++++|||. +.++..++.+||+.|.+|++.+
T Consensus 172 ~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~ 204 (227)
T 2tps_A 172 SIPIVGIGGIT-IDNAAPVIQAGADGVSMISAIS 204 (227)
T ss_dssp CCCEEEESSCC-TTTSHHHHHTTCSEEEESHHHH
T ss_pred CCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHHhh
Confidence 38899999999 9999999999999999998654
No 252
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=87.90 E-value=1 Score=50.44 Aligned_cols=107 Identities=13% Similarity=0.044 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEe-------ccc------c--C-hHHHHHHHHhcCCcEEEEecCCCCCCccccccccc
Q psy12805 507 IEDLAELIYDLKCANPNARISVKL-------VSE------V--G-VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKN 570 (1429)
Q Consensus 507 iedL~qlI~~Lk~~~~~~pV~VKL-------v~e------~--G-vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~ 570 (1429)
++-+.++++.+.+..--+.|.+|. +.. . . ++..+..+.+. ++.|++.+.+-. ...
T Consensus 115 p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i~~d--------G~~ 185 (260)
T 2agk_A 115 LKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHAADVE--------GLC 185 (260)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC---------------
T ss_pred HHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEeeccc--------cCc
Confidence 677777777775211023455551 110 1 2 33788889999 999999876421 113
Q ss_pred cCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh--cchhhhcchhH
Q psy12805 571 AGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL--GADEIGLSTAP 626 (1429)
Q Consensus 571 ~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL--GAdavg~gt~~ 626 (1429)
.|..+ ..+.++.+.+.. +..+++|++||++|..|+.+++.+ ||+.+-+|+++
T Consensus 186 ~G~d~-eli~~l~~~~~~---~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 186 GGIDE-LLVSKLFEWTKD---YDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp CCCCH-HHHHHHHHHHTT---CSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred CCCCH-HHHHHHHHhhcc---cCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 45544 334444443200 115899999999999999999988 99999888865
No 253
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=87.86 E-value=1.9 Score=49.10 Aligned_cols=86 Identities=20% Similarity=0.214 Sum_probs=61.0
Q ss_pred HHHHHHHHHhCCC-CeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 511 AELIYDLKCANPN-ARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 511 ~qlI~~Lk~~~~~-~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
.+-++.+|+..|. ++|.|- +.--..+..+.++|+|+|.++... |. .+.++.+.+
T Consensus 183 ~~av~~ar~~~~~~~~IgVe----v~t~eea~eA~~aGaD~I~ld~~~----------------~~--~~k~av~~v--- 237 (286)
T 1x1o_A 183 GEAVRRAKARAPHYLKVEVE----VRSLEELEEALEAGADLILLDNFP----------------LE--ALREAVRRV--- 237 (286)
T ss_dssp HHHHHHHHHHSCTTSCEEEE----ESSHHHHHHHHHHTCSEEEEESCC----------------HH--HHHHHHHHH---
T ss_pred HHHHHHHHHhCCCCCEEEEE----eCCHHHHHHHHHcCCCEEEECCCC----------------HH--HHHHHHHHh---
Confidence 4567778877654 577773 222444666788999999998862 21 133444433
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcch
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLST 624 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt 624 (1429)
+.++++.++|||. ...+...+..|+|.+++|+
T Consensus 238 --~~~ipi~AsGGIt-~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 238 --GGRVPLEASGNMT-LERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp --TTSSCEEEESSCC-HHHHHHHHHHTCSEEECTH
T ss_pred --CCCCeEEEEcCCC-HHHHHHHHHcCCCEEEEcH
Confidence 2368999999995 8889889999999998876
No 254
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=87.71 E-value=1.8 Score=49.21 Aligned_cols=90 Identities=16% Similarity=0.154 Sum_probs=65.5
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
+.+-++..|+..|..+|.|-+- --..+..+.++|+|+|.++... | ..+.++.+.+...
T Consensus 181 i~~av~~ar~~~~~~~I~Vev~----t~eea~eal~aGaD~I~LDn~~----------------~--~~~~~~v~~l~~~ 238 (284)
T 1qpo_A 181 VVDALRAVRNAAPDLPCEVEVD----SLEQLDAVLPEKPELILLDNFA----------------V--WQTQTAVQRRDSR 238 (284)
T ss_dssp HHHHHHHHHHHCTTSCEEEEES----SHHHHHHHGGGCCSEEEEETCC----------------H--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEEeC----CHHHHHHHHHcCCCEEEECCCC----------------H--HHHHHHHHHhhcc
Confidence 4567788888877657777532 2356677889999999999852 1 3345555555443
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcch
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLST 624 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt 624 (1429)
+ .++.|.+||||. ...+......|+|.+.+|+
T Consensus 239 ~--~~v~ieaSGGIt-~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 239 A--PTVMLESSGGLS-LQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp C--TTCEEEEESSCC-TTTHHHHHHTTCSEEECGG
T ss_pred C--CCeEEEEECCCC-HHHHHHHHhcCCCEEEECH
Confidence 2 358999999994 7888888999999998887
No 255
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=87.36 E-value=0.3 Score=55.76 Aligned_cols=92 Identities=13% Similarity=0.082 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhCCC-CeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHh
Q psy12805 510 LAELIYDLKCANPN-ARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLAL 588 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~-~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~ 588 (1429)
+.+-++..|+..|. ++|.|- +..-..+..+.++|+|+|.++..+ | ..+.++.+.+..
T Consensus 185 i~~ai~~~r~~~~~~~~i~ve----v~tlee~~~A~~aGaD~I~ld~~~----------------~--~~l~~~v~~l~~ 242 (294)
T 3c2e_A 185 ITNAVKNARAVCGFAVKIEVE----CLSEDEATEAIEAGADVIMLDNFK----------------G--DGLKMCAQSLKN 242 (294)
T ss_dssp HHHHHHHHHHHHCTTSCEEEE----CSSSHHHHHHHHHTCSEEECCC---------------------------------
T ss_pred HHHHHHHHHHhcCcCCeEEEe----cCCHHHHHHHHHcCCCEEEECCCC----------------H--HHHHHHHHHhcc
Confidence 34456666666553 566663 222144566778999999986521 1 223344444432
Q ss_pred c--CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchh
Q psy12805 589 N--NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTA 625 (1429)
Q Consensus 589 ~--gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~ 625 (1429)
. |+ .+++|.+|||| |...+...+..|||.+++|+.
T Consensus 243 ~~~g~-~~v~I~ASGGI-t~~ni~~~~~~GvD~i~vGs~ 279 (294)
T 3c2e_A 243 KWNGK-KHFLLECSGGL-NLDNLEEYLCDDIDIYSTSSI 279 (294)
T ss_dssp -------CCEEEEECCC-CC------CCCSCSEEECGGG
T ss_pred cccCC-CCeEEEEECCC-CHHHHHHHHHcCCCEEEEech
Confidence 2 22 24899999999 899999999999999999884
No 256
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=87.34 E-value=1.1 Score=48.41 Aligned_cols=76 Identities=18% Similarity=0.162 Sum_probs=52.4
Q ss_pred hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh
Q psy12805 536 VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL 615 (1429)
Q Consensus 536 vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL 615 (1429)
....+..+.++|+|.|.+++..+.. .+.+. .+..+ +.+.+. ..++|++.|++++..++.+++.+
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~----------~~~~~--~~~~i-~~i~~~---~~ipvi~~g~i~~~~~~~~~~~~ 98 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAP----------EGRAT--FIDSV-KRVAEA---VSIPVLVGGGVRSLEDATTLFRA 98 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCT----------TTHHH--HHHHH-HHHHHH---CSSCEEEESSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccc----------cCCcc--cHHHH-HHHHHh---cCCCEEEECCCCCHHHHHHHHHc
Confidence 4456777889999999998765421 01111 11112 222221 25899999999999999999999
Q ss_pred cchhhhcchhHH
Q psy12805 616 GADEIGLSTAPL 627 (1429)
Q Consensus 616 GAdavg~gt~~L 627 (1429)
|||.|.+++..+
T Consensus 99 Gad~V~i~~~~~ 110 (253)
T 1h5y_A 99 GADKVSVNTAAV 110 (253)
T ss_dssp TCSEEEESHHHH
T ss_pred CCCEEEEChHHh
Confidence 999999988654
No 257
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=87.15 E-value=7.4 Score=42.95 Aligned_cols=65 Identities=23% Similarity=0.198 Sum_probs=48.1
Q ss_pred HHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhh
Q psy12805 543 VAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEI 620 (1429)
Q Consensus 543 ~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdav 620 (1429)
++++|+++|-.- -| -++++|.+-...+.++++.+..++.+ ..+++. ++|++.++..+.++|+|.+
T Consensus 130 aa~AGa~~iSpF--Vg--------Ridd~g~dG~~~v~~i~~~~~~~~~~--t~iL~A-S~r~~~~v~~~~l~G~d~~ 194 (230)
T 1vpx_A 130 AAKAGATYVSPF--VG--------RMDDLSNDGMRMLGEIVEIYNNYGFE--TEIIAA-SIRHPMHVVEAALMGVDIV 194 (230)
T ss_dssp HHHHTCSEEEEB--HH--------HHHHTTSCHHHHHHHHHHHHHHHTCS--CEEEEB-SCCSHHHHHHHHHHTCSEE
T ss_pred HHhCCCeEEEec--cc--------hhhhccccHHHHHHHHHHHHHHcCCC--eEEEee-ccCCHHHHHHHHHhCCCEE
Confidence 556676655432 11 15678888889999999999888864 456654 5999999999999998863
No 258
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=87.13 E-value=6.1 Score=43.31 Aligned_cols=101 Identities=20% Similarity=0.170 Sum_probs=66.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecccc-ChHH--------------------HHHHHHhcCCcEEEEecCCCCCCcc
Q psy12805 505 YSIEDLAELIYDLKCANPNARISVKLVSEV-GVGV--------------------VASGVAKGKAEHIVISGHDGGTGAS 563 (1429)
Q Consensus 505 ~siedL~qlI~~Lk~~~~~~pV~VKLv~e~-Gvg~--------------------vA~~~akaGaD~I~IsG~~GGTgaa 563 (1429)
++.|...+.-.+|.+..| .|.||+++.. |+.. -|..++++|+++|-.- -|
T Consensus 63 ~d~e~mi~eA~~l~~~~~--nv~IKIP~T~eGl~A~~~L~~~GI~vn~TliFS~~QA~~aa~AGa~~iSpf--vg----- 133 (220)
T 1l6w_A 63 TTAEGMVNDALKLRSIIA--DIVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGLLSALAGAEYVAPY--VN----- 133 (220)
T ss_dssp SSHHHHHHHHHHHHHHST--TCEEEEECSHHHHHHHHHHHHHTCCEEEEEECSHHHHHHHHHHTCSEEEEB--HH-----
T ss_pred CCHHHHHHHHHHHHHhCC--CEEEEeCCCHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHCCCeEEEec--cc-----
Confidence 355555555555555553 3777776642 3322 1233556676655432 11
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhh
Q psy12805 564 SWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEI 620 (1429)
Q Consensus 564 p~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdav 620 (1429)
-++++|.|-...+..+++.+..++.+ ..+++. ++|++.++..+.++|+|.+
T Consensus 134 ---Ridd~g~~G~~~i~~~~~~y~~~~~~--t~il~A-S~r~~~~v~~~~l~G~d~~ 184 (220)
T 1l6w_A 134 ---RIDAQGGSGIQTVTDLHQLLKMHAPQ--AKVLAA-SFKTPRQALDCLLAGCESI 184 (220)
T ss_dssp ---HHHHTTSCHHHHHHHHHHHHHHHCTT--CEEEEB-CCSSHHHHHHHHHTTCSEE
T ss_pred ---hhhcccccHHHHHHHHHHHHHhcCCC--eEEeec-ccCCHHHHHHHHHhCCCeE
Confidence 15678889899999999999988864 455554 7999999999999998763
No 259
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=87.13 E-value=0.95 Score=51.35 Aligned_cols=68 Identities=21% Similarity=0.173 Sum_probs=48.8
Q ss_pred HHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchh
Q psy12805 540 ASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADE 619 (1429)
Q Consensus 540 A~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAda 619 (1429)
+...+..|..+|.+++.. . ... ...+.++.+.+ ...++|++.|||||..|+.+++.+|||.
T Consensus 192 a~~gad~G~~lV~LD~~~--~-----------~v~-~e~V~~I~~~~-----~~~iPV~vGGGIrs~Eda~~ll~aGAD~ 252 (286)
T 3vk5_A 192 LHVARAFGFHMVYLYSRN--E-----------HVP-PEVVRHFRKGL-----GPDQVLFVSGNVRSGRQVTEYLDSGADY 252 (286)
T ss_dssp HHHHHHTTCSEEEEECSS--S-----------CCC-HHHHHHHHHHS-----CTTCEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHcCCCEEEEcCCC--C-----------cCC-HHHHHHHHHhc-----CCCCCEEEEeCCCCHHHHHHHHHcCCCE
Confidence 444567899999999532 1 111 13344444432 1258999999999999999999999999
Q ss_pred hhcchhH
Q psy12805 620 IGLSTAP 626 (1429)
Q Consensus 620 vg~gt~~ 626 (1429)
|.+||++
T Consensus 253 VVVGSAa 259 (286)
T 3vk5_A 253 VGFAGAL 259 (286)
T ss_dssp EEESGGG
T ss_pred EEECchh
Confidence 9999954
No 260
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=87.12 E-value=0.33 Score=61.33 Aligned_cols=43 Identities=19% Similarity=0.336 Sum_probs=36.2
Q ss_pred CCccCCCCEEEeCCCCC--CCCcHHHHHHHHHHHHHHHHHHHhCC
Q psy12805 1365 TYLTTVPRVYAAGDCRR--GQSLVVWAISEGRQAAREIDSFLMGT 1407 (1429)
Q Consensus 1365 ~~~TSvPgVFAAGD~a~--g~~lvv~Ai~qGr~AA~nI~~~L~g~ 1407 (1429)
.++|++||+||||||+. .......+..+|++|+..+..|+...
T Consensus 447 ~~~t~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~~~~~~~ 491 (662)
T 3gyx_A 447 NRMTTVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMVRWYLDH 491 (662)
T ss_dssp TTBCSSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCccCCeEeCccccccccCccHhHHHHHHHHHHHHHHHHHhhC
Confidence 57999999999999974 23347788899999999999999765
No 261
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=87.04 E-value=1.6 Score=51.24 Aligned_cols=99 Identities=14% Similarity=0.182 Sum_probs=66.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHH
Q psy12805 505 YSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQ 584 (1429)
Q Consensus 505 ~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q 584 (1429)
.+++++.+.|..+|+.. ..+|.+-+.........+..+.++|+|+|.|+-..|.. -.++..+.++.+
T Consensus 79 ~s~e~~~~~i~~vk~~~-~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~------------~~~~~~I~~ik~ 145 (366)
T 4fo4_A 79 MSIEQQAAQVHQVKISG-GLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHS------------EGVLQRIRETRA 145 (366)
T ss_dssp SCHHHHHHHHHHHHTTT-SCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTS------------HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC-ceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCC------------HHHHHHHHHHHH
Confidence 58999999999999863 35555554333345566788999999999997554321 011222333332
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcc
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLS 623 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~g 623 (1429)
.+ ..+++++ |.+.|..++.++..+|||++.+|
T Consensus 146 ~~------p~v~Vi~-G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 146 AY------PHLEIIG-GNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HC------TTCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred hc------CCCceEe-eeeCCHHHHHHHHHcCCCEEEEe
Confidence 21 1356655 66889999999999999998764
No 262
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=86.83 E-value=0.64 Score=49.48 Aligned_cols=72 Identities=17% Similarity=0.091 Sum_probs=47.0
Q ss_pred HHHHHhcCCcEEEEecC-CCCCCccccccccccCCCh-HHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcc
Q psy12805 540 ASGVAKGKAEHIVISGH-DGGTGASSWTGIKNAGLPW-ELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGA 617 (1429)
Q Consensus 540 A~~~akaGaD~I~IsG~-~GGTgaap~~~~~~~GiP~-~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGA 617 (1429)
+..+.+.|+|+|.+++. .++++ .. +.+. ...+.++.+. .+++++++|||. ..++..++.+||
T Consensus 121 ~~~~~~~g~d~i~~~~~~~~~~~-------~~-~~~~~~~~l~~l~~~-------~~~pvia~GGI~-~~nv~~~~~~Ga 184 (215)
T 1xi3_A 121 ALEAEKKGADYLGAGSVFPTKTK-------ED-ARVIGLEGLRKIVES-------VKIPVVAIGGIN-KDNAREVLKTGV 184 (215)
T ss_dssp HHHHHHHTCSEEEEECSSCC-----------C-CCCCHHHHHHHHHHH-------CSSCEEEESSCC-TTTHHHHHTTTC
T ss_pred HHHHHhcCCCEEEEcCCccCCCC-------CC-CCCcCHHHHHHHHHh-------CCCCEEEECCcC-HHHHHHHHHcCC
Confidence 44567789999999763 22211 01 1221 1223333222 157899999999 999999999999
Q ss_pred hhhhcchhHH
Q psy12805 618 DEIGLSTAPL 627 (1429)
Q Consensus 618 davg~gt~~L 627 (1429)
+.|.+|++.+
T Consensus 185 ~gv~vgs~i~ 194 (215)
T 1xi3_A 185 DGIAVISAVM 194 (215)
T ss_dssp SEEEESHHHH
T ss_pred CEEEEhHHHh
Confidence 9999998654
No 263
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=86.64 E-value=0.72 Score=52.49 Aligned_cols=91 Identities=16% Similarity=0.155 Sum_probs=65.1
Q ss_pred HHHHHHHHHHhCCC-CeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHh
Q psy12805 510 LAELIYDLKCANPN-ARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLAL 588 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~-~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~ 588 (1429)
+.+-++..|+..|. ++|.|- +.--..+..+.++|+|+|.++... ...+.++.+.+..
T Consensus 179 i~~av~~ar~~~~~~~~I~VE----V~tleea~eA~~aGaD~I~LDn~~------------------~e~l~~av~~l~~ 236 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVE----VENLEDALRAVEAGADIVMLDNLS------------------PEEVKDISRRIKD 236 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEE----ESSHHHHHHHHHTTCSEEEEESCC------------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCceEEEE----eCCHHHHHHHHHcCCCEEEECCCC------------------HHHHHHHHHHhhc
Confidence 56678888888765 677774 222355677889999999999842 1335555555543
Q ss_pred cCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchh
Q psy12805 589 NNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTA 625 (1429)
Q Consensus 589 ~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~ 625 (1429)
.+ .+++|.++|||. ...+......|+|.+.+|+.
T Consensus 237 ~~--~~v~ieASGGIt-~eni~~~a~tGVD~IsvGsl 270 (285)
T 1o4u_A 237 IN--PNVIVEVSGGIT-EENVSLYDFETVDVISSSRL 270 (285)
T ss_dssp HC--TTSEEEEEECCC-TTTGGGGCCTTCCEEEEGGG
T ss_pred cC--CCceEEEECCCC-HHHHHHHHHcCCCEEEEeHH
Confidence 22 358999999994 67777788899999988873
No 264
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=86.35 E-value=3.2 Score=45.52 Aligned_cols=109 Identities=15% Similarity=0.099 Sum_probs=61.9
Q ss_pred HHHHHHHhC-CCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCC-----------C---------cccccccc--
Q psy12805 513 LIYDLKCAN-PNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGT-----------G---------ASSWTGIK-- 569 (1429)
Q Consensus 513 lI~~Lk~~~-~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGT-----------g---------aap~~~~~-- 569 (1429)
.|+.||+.+ ++.|+.|+|-.+ ........++++|+|.|++-.....+ | ..|...++
T Consensus 53 ~v~~ir~~~~~~~~~dvhLmv~-~p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~ 131 (228)
T 3ovp_A 53 VVESLRKQLGQDPFFDMHMMVS-KPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPW 131 (228)
T ss_dssp HHHHHHHHHCSSSCEEEEEECS-CGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGG
T ss_pred HHHHHHHhhCCCCcEEEEEEeC-CHHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHH
Confidence 566777774 678888877653 22333455777888888875432110 0 01111111
Q ss_pred ------------cc---CCChH-HHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhH
Q psy12805 570 ------------NA---GLPWE-LGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAP 626 (1429)
Q Consensus 570 ------------~~---GiP~~-laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~ 626 (1429)
+. |..+. ..+..+.+ |.+.. .++.|.++|||+ ...+..++..|||.+-+|++.
T Consensus 132 l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~-lr~~~--~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaI 200 (228)
T 3ovp_A 132 ANQIDMALVMTVEPGFGGQKFMEDMMPKVHW-LRTQF--PSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAI 200 (228)
T ss_dssp GGGCSEEEEESSCTTTCSCCCCGGGHHHHHH-HHHHC--TTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHH
T ss_pred hccCCeEEEeeecCCCCCcccCHHHHHHHHH-HHHhc--CCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHH
Confidence 01 21111 12222222 22221 257899999995 788889999999998888743
No 265
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=85.69 E-value=1.6 Score=48.39 Aligned_cols=89 Identities=13% Similarity=-0.094 Sum_probs=53.4
Q ss_pred CCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCcccccccccc-CCChHHHHHHHHHHHHhcCCCCceEEEEcC
Q psy12805 523 NARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNA-GLPWELGVAETHQVLALNNLRSRVVLQADG 601 (1429)
Q Consensus 523 ~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~-GiP~~laL~ev~q~L~~~gLR~~V~LiasG 601 (1429)
...|++-. ... ..+..+.+.|+|+|.++....+. . .... .+. +..+.++. .. ...++++++.|
T Consensus 135 ~~~iG~S~---ht~-~Ea~~A~~~GaDyI~vgpvf~T~-t-----K~~~~~~g-l~~l~~~~----~~-~~~~iPvvAiG 198 (243)
T 3o63_A 135 DTLIGRST---HDP-DQVAAAAAGDADYFCVGPCWPTP-T-----KPGRAAPG-LGLVRVAA----EL-GGDDKPWFAIG 198 (243)
T ss_dssp TCEEEEEE---CSH-HHHHHHHHSSCSEEEECCSSCCC-C----------CCC-HHHHHHHH----TC----CCCEEEES
T ss_pred CCEEEEeC---CCH-HHHHHHhhCCCCEEEEcCccCCC-C-----CCCcchhh-HHHHHHHH----Hh-ccCCCCEEEec
Confidence 45555542 223 33566778999999997643221 0 1111 111 12222222 11 11368999999
Q ss_pred CcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 602 QIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 602 GIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
|| |..++..++..||+.|.++++.+-
T Consensus 199 GI-~~~ni~~~~~aGa~gvav~sai~~ 224 (243)
T 3o63_A 199 GI-NAQRLPAVLDAGARRIVVVRAITS 224 (243)
T ss_dssp SC-CTTTHHHHHHTTCCCEEESHHHHT
T ss_pred CC-CHHHHHHHHHcCCCEEEEeHHHhC
Confidence 99 899999999999999999986553
No 266
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=85.57 E-value=1.2 Score=49.62 Aligned_cols=92 Identities=14% Similarity=0.078 Sum_probs=60.9
Q ss_pred CceEEEccccccccHHHHHHhCCCCccccccc------cc----------h----hhccchHHHHHHHHHHhCC--CCCC
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNIIPK------WN----------D----LIYHNNWSEALNQLLQTNN--FPAG 1299 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~------~d----------~----lvf~~e~~~al~~~Le~~G--~~~g 1299 (1429)
.+++|||||..|+..+..+++.|.+|..+=+. |. . .+...++...+.+.+++.+ +..+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 47999999999999999988888887211110 10 0 0112467777777777766 4457
Q ss_pred cEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccc
Q psy12805 1300 IKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGF 1338 (1429)
Q Consensus 1300 v~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~ 1338 (1429)
.++..+.+. .++.+.... .+ . ++.+|.||+|+|.
T Consensus 88 ~~v~~i~~~--~~~~~~v~~-~~-g-~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 88 QAVESVEKQ--ADGVFKLVT-NE-E-THYSKTVIITAGN 121 (332)
T ss_dssp CCEEEEEEC--TTSCEEEEE-SS-E-EEEEEEEEECCTT
T ss_pred CEEEEEEEC--CCCcEEEEE-CC-C-EEEeCEEEECCCC
Confidence 778888653 233454333 33 2 3999999999998
No 267
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=85.52 E-value=1 Score=50.53 Aligned_cols=92 Identities=14% Similarity=0.135 Sum_probs=58.2
Q ss_pred CceEEEccccccccHHHHHHhCCCCccccc----------------------cccchhhccchHHHHHHHHHHhCC--CC
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNII----------------------PKWNDLIYHNNWSEALNQLLQTNN--FP 1297 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~iL----------------------p~~d~lvf~~e~~~al~~~Le~~G--~~ 1297 (1429)
.+++|||||..|+..+..+++.|.+|..+= |.+...+...++.+.+.+.+++.+ +.
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 469999999999999999988887762111 111111122456677777777766 33
Q ss_pred CCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1298 AGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1298 ~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+. +..+.. .++.+... .+ ..++.+|.||+|+|..|
T Consensus 89 ~~~-v~~i~~---~~~~~~v~-~~--~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 89 TET-VTKVDF---SSKPFKLF-TD--SKAILADAVILAIGAVA 124 (333)
T ss_dssp CCC-CCEEEC---SSSSEEEE-CS--SEEEEEEEEEECCCEEE
T ss_pred EeE-EEEEEE---cCCEEEEE-EC--CcEEEcCEEEECCCCCc
Confidence 343 455533 23334433 22 35799999999999874
No 268
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=84.91 E-value=3.8 Score=46.78 Aligned_cols=95 Identities=13% Similarity=0.008 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEecc----ccC---hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVS----EVG---VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELG 578 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~----e~G---vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~la 578 (1429)
.++++.++++..++. +.|+++=... ... +...+..++++|||+|..+ . |+ . .
T Consensus 156 ~l~~i~~v~~~a~~~--GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~-~---t~------------e---~ 214 (295)
T 3glc_A 156 SIKNIIQLVDAGMKV--GMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY-Y---VE------------K---G 214 (295)
T ss_dssp HHHHHHHHHHHHHTT--TCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE-C---CT------------T---T
T ss_pred HHHHHHHHHHHHHHc--CCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC-C---CH------------H---H
Confidence 556677777777654 5788772111 011 2334566789999999987 2 11 0 1
Q ss_pred HHHHHHHHHhcCCCCceEEEEcCCcccH-HH----HHHHHHhcchhhhcchhHHH
Q psy12805 579 VAETHQVLALNNLRSRVVLQADGQIRTG-FD----VVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 579 L~ev~q~L~~~gLR~~V~LiasGGIrtg-~D----v~kAlaLGAdavg~gt~~L~ 628 (1429)
+.++. +. .+++|+++||+++. .| +..++..||+.+.+|++.+-
T Consensus 215 ~~~vv----~~---~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q 262 (295)
T 3glc_A 215 FERIV----AG---CPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQ 262 (295)
T ss_dssp HHHHH----HT---CSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHH----Hh---CCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhc
Confidence 23322 22 25899999999964 33 45667999999988886553
No 269
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=84.77 E-value=0.33 Score=59.99 Aligned_cols=48 Identities=13% Similarity=0.165 Sum_probs=41.9
Q ss_pred EEecCCCCcc-CCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhCC
Q psy12805 1359 YSTVEKTYLT-TVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFLMGT 1407 (1429)
Q Consensus 1359 I~VD~~~~~T-SvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g~ 1407 (1429)
|.+|+ .++| +++|+|+|||+++...-++.|..+|..||+.|.+++.++
T Consensus 497 i~~~~-~~~~~~~~gly~~GegaG~a~gi~~Aa~~G~~~a~~i~~~~~~~ 545 (549)
T 3nlc_A 497 IKRGK-DFQSVNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARDIVAA 545 (549)
T ss_dssp CCCTT-TTSCTTCBTEEECHHHHTSCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECC-CceECCcCCEEEccccCChhhHHHHHHHHHHHHHHHHHHHhhhc
Confidence 45565 6788 899999999999988899999999999999999998653
No 270
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=84.71 E-value=0.65 Score=57.90 Aligned_cols=49 Identities=18% Similarity=0.277 Sum_probs=38.7
Q ss_pred CCEEecCCCCccCCCCEEEeCCCCC-C--------CCcHHHHHHHHHHHHHHHHHHHhC
Q psy12805 1357 SNYSTVEKTYLTTVPRVYAAGDCRR-G--------QSLVVWAISEGRQAAREIDSFLMG 1406 (1429)
Q Consensus 1357 G~I~VD~~~~~TSvPgVFAAGD~a~-g--------~~lvv~Ai~qGr~AA~nI~~~L~g 1406 (1429)
|.|.||. ..+|++||+||||+|+. + ......|+-.|+.|++++..++..
T Consensus 360 GGi~vd~-~~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~~~ 417 (602)
T 1kf6_A 360 GGIETDQ-NCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAAT 417 (602)
T ss_dssp CEEECCT-TSBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CeEEECC-CCccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhhhc
Confidence 5588886 78999999999999863 1 123566777899999999988743
No 271
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=84.59 E-value=4.6 Score=47.97 Aligned_cols=102 Identities=18% Similarity=0.100 Sum_probs=68.5
Q ss_pred HHHHHHHHHhCCC-CeEEEEeccccCh-HHHHHHHHhc--CCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHH
Q psy12805 511 AELIYDLKCANPN-ARISVKLVSEVGV-GVVASGVAKG--KAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVL 586 (1429)
Q Consensus 511 ~qlI~~Lk~~~~~-~pV~VKLv~e~Gv-g~vA~~~aka--GaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L 586 (1429)
.+-+...++..|. .++.|=.- ..+. -..|..++++ |+|.|.+|...-. -|- ....+.++.+.|
T Consensus 197 ~~A~~~~~~~~p~~~~~~vlvD-T~d~~~~~al~~a~~l~~~d~IrlDs~~~~-----------~gd-~~~~v~~v~~~l 263 (398)
T 2i1o_A 197 EEAWKLTLENTKNGQKSVLLID-TYMDEKFAAIKIAEMFDKVDYIRLDTPSSR-----------RGN-FEALIREVRWEL 263 (398)
T ss_dssp HHHHHHHHHTCCTTSCCEEECC-SSSCHHHHHHHHHTTCSCCCEEEECCCGGG-----------CSC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCEEEEEc-CchHHHHHHHHHHHhhcCCcEEEeCCCCCC-----------ccc-HHHHHHHHHHHH
Confidence 5566677777765 45655422 2221 1233444555 9999999987420 012 345567788888
Q ss_pred HhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 587 ALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 587 ~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
.+.|.. ++.|++|||| |...+......|+|.+|+||...
T Consensus 264 d~~G~~-~~~I~aSggl-~~~~i~~l~~~GvD~~gvGt~l~ 302 (398)
T 2i1o_A 264 ALRGRS-DIKIMVSGGL-DENTVKKLREAGAEAFGVGTSIS 302 (398)
T ss_dssp HHTTCT-TSEEEEESSC-CHHHHHHHHHTTCCEEEECHHHH
T ss_pred HhCCCC-ceEEEEeCCC-CHHHHHHHHHcCCCEEEeCcccC
Confidence 887863 5899999999 57778777888999999999554
No 272
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=84.54 E-value=1.5 Score=53.60 Aligned_cols=98 Identities=10% Similarity=0.095 Sum_probs=64.5
Q ss_pred CCceEEEccccccccHHHHHHhCCCCccccccc-------------cc--hhhccchHHHHHHHHHHhCC--CCCCcEEE
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGCPLGNIIPK-------------WN--DLIYHNNWSEALNQLLQTNN--FPAGIKTV 1303 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~iLp~-------------~d--~lvf~~e~~~al~~~Le~~G--~~~gv~v~ 1303 (1429)
..+++|||||..|+..+..+++.|.+|..+-+. +. ......++.+.+.+.+++.+ +..+.++.
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~ 291 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSAS 291 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 457999999999999999998888877322111 10 01122467777777777777 55577777
Q ss_pred EEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1304 KVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1304 ~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+.+....++.+... ..++ +++.+|.||+|+|..+
T Consensus 292 ~i~~~~~~~~~~~V~-~~~g-~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 292 KLVPAATEGGLHQIE-TASG-AVLKARSIIIATGAKW 326 (521)
T ss_dssp EEECCSSTTSCEEEE-ETTS-CEEEEEEEEECCCEEE
T ss_pred EEEeccCCCceEEEE-ECCC-CEEEcCEEEECCCCCc
Confidence 776532223344433 3332 4799999999999874
No 273
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=84.35 E-value=1.5 Score=48.24 Aligned_cols=95 Identities=6% Similarity=0.008 Sum_probs=60.2
Q ss_pred CCceEEEccccccccHHHHHHhCCCCccc-cc-----------------cccchhhccchHHHHHHHHHHhCC--CCCCc
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGCPLGN-II-----------------PKWNDLIYHNNWSEALNQLLQTNN--FPAGI 1300 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~-iL-----------------p~~d~lvf~~e~~~al~~~Le~~G--~~~gv 1300 (1429)
..+++|||||..|+..+..+++.|.+|.. += |.+...+...++...+.+.++..+ +..+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV- 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC-
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE-
Confidence 35799999999999999999988887744 11 111111122467777777777776 3334
Q ss_pred EEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1301 KTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1301 ~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
++..+ +. ...+.+.... ..+. ++.+|.|++|+|..|
T Consensus 83 ~v~~i-~~-~~~~~~~v~~-~~~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 83 GVEQI-LK-NSDGSFTIKL-EGGK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp CEEEE-EE-CTTSCEEEEE-TTSC-EEEEEEEEECCCEEE
T ss_pred EEEEE-ec-CCCCcEEEEE-ecCC-EEEeCEEEEeeCCCC
Confidence 55556 32 1113444212 2233 799999999999874
No 274
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=84.09 E-value=2.1 Score=50.76 Aligned_cols=27 Identities=7% Similarity=-0.101 Sum_probs=23.9
Q ss_pred CCceEEEccccccccHHHHHHhCCC--Cc
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGC--PL 1267 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc--~V 1267 (1429)
..+++|||||..|+..+.++++.|. +|
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V 34 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQV 34 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEE
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCe
Confidence 4679999999999999999998887 65
No 275
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=83.90 E-value=0.66 Score=54.20 Aligned_cols=96 Identities=11% Similarity=0.089 Sum_probs=54.9
Q ss_pred CceEEEccccccccHHHHHHh---CCCCcccc--------ccccch----hhccchHHHHHHHHHHhCCC--CCCcEEEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSS---HGCPLGNI--------IPKWND----LIYHNNWSEALNQLLQTNNF--PAGIKTVK 1304 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~---~Gc~V~~i--------Lp~~d~----lvf~~e~~~al~~~Le~~G~--~~gv~v~~ 1304 (1429)
++++|||||..|+.++..+++ .|.+|..+ .|.+.. .....++...+.+.+++.++ ..+ +++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 469999999999999999887 77777111 011110 01112344445556666563 223 4445
Q ss_pred EEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCc
Q psy12805 1305 VEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGP 1341 (1429)
Q Consensus 1305 Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp 1341 (1429)
+.. ++..+....-.++.+++++|.||+|+|.+|.
T Consensus 81 i~~---~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 81 IDA---KSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp EET---TTTEEEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred EeC---CCCEEEEccCCcccceeeCCEEEECCCCCcC
Confidence 532 2222222111122356999999999999854
No 276
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=83.87 E-value=1.9 Score=51.24 Aligned_cols=66 Identities=14% Similarity=0.138 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCch--------hhhhhccCc
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPE--------RYIANELDL 1351 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~--------~~Lle~lGL 1351 (1429)
++.+.+.+.+++.| +.++.+++.++.. ++.+.. ...+ . ++.||.||+|+|..+.. ..+++.+|+
T Consensus 133 ~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~---~~~~~V-~~~~-g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~ 206 (417)
T 3v76_A 133 DIIRMLMAEMKEAGVQLRLETSIGEVERT---ASGFRV-TTSA-G-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGL 206 (417)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEEE---TTEEEE-EETT-E-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEEe---CCEEEE-EECC-c-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCC
Confidence 45566666666666 5667888888653 233433 2333 2 79999999999987311 235666666
Q ss_pred cc
Q psy12805 1352 TL 1353 (1429)
Q Consensus 1352 el 1353 (1429)
.+
T Consensus 207 ~i 208 (417)
T 3v76_A 207 PV 208 (417)
T ss_dssp CE
T ss_pred CE
Confidence 54
No 277
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=83.78 E-value=1.8 Score=47.90 Aligned_cols=92 Identities=10% Similarity=0.078 Sum_probs=58.3
Q ss_pred ceEEEccccccccHHHHHHhCCC-Ccccc-----------------ccccchhhccchHHHHHHHHHHhCCC--CCCcEE
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGC-PLGNI-----------------IPKWNDLIYHNNWSEALNQLLQTNNF--PAGIKT 1302 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc-~V~~i-----------------Lp~~d~lvf~~e~~~al~~~Le~~G~--~~gv~v 1302 (1429)
+++|||+|..|+..+..+++.|. +|..+ .|.+...+...++.+.+.+.+++.++ .. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 58999999999999999988888 77111 11111112234567777777777663 33 355
Q ss_pred EEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1303 VKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1303 ~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
..+... ++.+.... .++ +++++|.||+|+|..|
T Consensus 82 ~~i~~~---~~~~~v~~-~~g-~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 82 QRVSKK---DSHFVILA-EDG-KTFEAKSVIIATGGSP 114 (311)
T ss_dssp EEEEEE---TTEEEEEE-TTS-CEEEEEEEEECCCEEE
T ss_pred EEEEEc---CCEEEEEE-cCC-CEEECCEEEECCCCCC
Confidence 566442 23343323 332 4799999999999874
No 278
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=83.77 E-value=2.7 Score=50.37 Aligned_cols=97 Identities=13% Similarity=0.107 Sum_probs=61.5
Q ss_pred CceEEEccccccccHHHHHHh---CCCC---c------cccccccc----------------------------------
Q psy12805 1242 KGLRIQAARCMECGVPFCQSS---HGCP---L------GNIIPKWN---------------------------------- 1275 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~---~Gc~---V------~~iLp~~d---------------------------------- 1275 (1429)
++++|||||..|+..+.++.+ .|.+ | ..+--.|.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 579999999999999999988 8888 6 11100000
Q ss_pred h-------------hhccchHHHHHHHHHHhCCC----CCCcEEEEEEEeecCCCceEEEEeC---CCeeEEEecEEEEe
Q psy12805 1276 D-------------LIYHNNWSEALNQLLQTNNF----PAGIKTVKVEWTKDATGRWKMDEVP---NSEKIFKCDLVLLA 1335 (1429)
Q Consensus 1276 ~-------------lvf~~e~~~al~~~Le~~G~----~~gv~v~~Ve~~k~~~G~~~~v~~~---gse~~ieaDlVLlA 1335 (1429)
+ .....++.+++.+..++.++ .++.++..++... ..+.|.....+ |...++.+|.||+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~-~~~~~~V~~~~~~~g~~~~~~~d~VVvA 161 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNE-DSQTFTVTVQDHTTDTIYSEEFDYVVCC 161 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEET-TTTEEEEEEEETTTTEEEEEEESEEEEC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcC-CCCcEEEEEEEcCCCceEEEEcCEEEEC
Confidence 0 01113455666666666553 4578888887642 22355544332 33367999999999
Q ss_pred cc--cc
Q psy12805 1336 MG--FL 1339 (1429)
Q Consensus 1336 iG--~~ 1339 (1429)
+| ..
T Consensus 162 tG~~s~ 167 (464)
T 2xve_A 162 TGHFST 167 (464)
T ss_dssp CCSSSS
T ss_pred CCCCCC
Confidence 99 55
No 279
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=83.74 E-value=1.5 Score=49.02 Aligned_cols=100 Identities=13% Similarity=0.024 Sum_probs=68.3
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhc-CCcEEEEecCCCCCCccccccccccCCChHHHHHHHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKG-KAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQ 584 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~aka-GaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q 584 (1429)
+.++|.++++..++. +.-+.|-+- -...+..+.++ |+|+|-+..++=.| ........ .+
T Consensus 135 ~~~~l~~l~~~a~~l--Gl~~lvEv~----~~eE~~~A~~l~g~~iIGinnr~l~t----------~~~d~~~~----~~ 194 (251)
T 1i4n_A 135 TAEQIKEIYEAAEEL--GMDSLVEVH----SREDLEKVFSVIRPKIIGINTRDLDT----------FEIKKNVL----WE 194 (251)
T ss_dssp CHHHHHHHHHHHHTT--TCEEEEEEC----SHHHHHHHHTTCCCSEEEEECBCTTT----------CCBCTTHH----HH
T ss_pred CHHHHHHHHHHHHHc--CCeEEEEeC----CHHHHHHHHhcCCCCEEEEeCccccc----------CCCCHHHH----HH
Confidence 457788888888875 445555422 22335668899 99999998876332 22222111 11
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
|. ..+...+.+|+-|||.|+.|+.++..+ |++|-+|++.|-
T Consensus 195 -l~-~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aimr 235 (251)
T 1i4n_A 195 -LL-PLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIMK 235 (251)
T ss_dssp -HG-GGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHHH
T ss_pred -HH-HhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHcC
Confidence 11 113345789999999999999999999 999999998775
No 280
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=83.54 E-value=1.6 Score=47.64 Aligned_cols=94 Identities=6% Similarity=-0.010 Sum_probs=57.9
Q ss_pred CceEEEccccccccHHHHHHhCCCCccccc--------cc----cch--hhccchHHHHHHHHHHhC-CCCC-CcEEEEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNII--------PK----WND--LIYHNNWSEALNQLLQTN-NFPA-GIKTVKV 1305 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~iL--------p~----~d~--lvf~~e~~~al~~~Le~~-G~~~-gv~v~~V 1305 (1429)
.+++|||||..|+..+..+.+.|.+|..+= +. +.. .....++.+.+.+.+++. ++.. ..++..+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 82 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDA 82 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEE
Confidence 369999999999999999998898872111 10 100 011235666667777665 3211 2355666
Q ss_pred EEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1306 EWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1306 e~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+. ++.+... ..+ .+++.+|.|++|+|..|
T Consensus 83 ~~~---~~~~~v~-~~~-g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 83 KGS---FGEFIVE-IDG-GRRETAGRLILAMGVTD 112 (297)
T ss_dssp EEE---TTEEEEE-ETT-SCEEEEEEEEECCCCEE
T ss_pred EEc---CCeEEEE-ECC-CCEEEcCEEEECCCCCC
Confidence 542 2334333 333 24799999999999874
No 281
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=83.48 E-value=4.3 Score=44.13 Aligned_cols=101 Identities=20% Similarity=0.183 Sum_probs=61.3
Q ss_pred HHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhc--CCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHh
Q psy12805 511 AELIYDLKCANPNARISVKLVSEVGVGVVASGVAKG--KAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLAL 588 (1429)
Q Consensus 511 ~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~aka--GaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~ 588 (1429)
...+..+++. +.++++-+.+...... .....+. ++|+|.+....+|++.. .+.-..+..+.++.+..
T Consensus 103 ~~~~~~i~~~--g~~igv~~~p~t~~e~-~~~~~~~~~~~d~vl~~sv~pg~~g~------~~~~~~l~~i~~~~~~~-- 171 (228)
T 1h1y_A 103 QELIQSIKAK--GMRPGVSLRPGTPVEE-VFPLVEAENPVELVLVMTVEPGFGGQ------KFMPEMMEKVRALRKKY-- 171 (228)
T ss_dssp HHHHHHHHHT--TCEEEEEECTTSCGGG-GHHHHHSSSCCSEEEEESSCTTCSSC------CCCGGGHHHHHHHHHHC--
T ss_pred HHHHHHHHHc--CCCEEEEEeCCCCHHH-HHHHHhcCCCCCEEEEEeecCCCCcc------cCCHHHHHHHHHHHHhc--
Confidence 4456666664 5777777654433322 2334444 89999997655443321 11111122334443321
Q ss_pred cCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 589 NNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 589 ~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
.+++|+++|||.. .++..++..|||.+-+|++.+
T Consensus 172 ----~~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~ 205 (228)
T 1h1y_A 172 ----PSLDIEVDGGLGP-STIDVAASAGANCIVAGSSIF 205 (228)
T ss_dssp ----TTSEEEEESSCST-TTHHHHHHHTCCEEEESHHHH
T ss_pred ----CCCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHH
Confidence 2589999999997 778888888999998888544
No 282
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=83.14 E-value=1.6 Score=50.65 Aligned_cols=56 Identities=9% Similarity=0.255 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCc-eEEEEeCCCeeEEEecEEEEecccc
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGR-WKMDEVPNSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~-~~~v~~~gse~~ieaDlVLlAiG~~ 1339 (1429)
.+.+.+.+.+++.| +.++.+++.++.. +++. +.....+|+..++.+|.||.|.|..
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~--~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFF--GTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEE--TTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEe--CCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 45566666666556 5668888888653 2232 2222234444579999999999976
No 283
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=83.09 E-value=2.1 Score=47.21 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=58.8
Q ss_pred CceEEEccccccccHHHHHHhCCCCccccc----------------cccchhhccchHHHHHHHHHHhCCCC--CCcEEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNII----------------PKWNDLIYHNNWSEALNQLLQTNNFP--AGIKTV 1303 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~iL----------------p~~d~lvf~~e~~~al~~~Le~~G~~--~gv~v~ 1303 (1429)
.+++|||||..|+..+..+++.|.+|..+= |.+.. ....++.+.+.+.+++.++. . .++.
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 93 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIE-IQASDMIKVFNKHIEKYEVPVLL-DIVE 93 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTT-EEHHHHHHHHHHHHHTTTCCEEE-SCEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCC-CCHHHHHHHHHHHHHHcCCEEEE-EEEE
Confidence 479999999999999999998888872111 11111 12246777777777777632 2 4455
Q ss_pred EEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1304 KVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1304 ~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+.. +++.+.... .+ ..++.+|.|++|+|..|
T Consensus 94 ~i~~---~~~~~~v~~-~~-g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 94 KIEN---RGDEFVVKT-KR-KGEFKADSVILGIGVKR 125 (323)
T ss_dssp EEEE---C--CEEEEE-SS-SCEEEEEEEEECCCCEE
T ss_pred EEEe---cCCEEEEEE-CC-CCEEEcCEEEECcCCCC
Confidence 5543 233444333 22 24799999999999884
No 284
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=82.95 E-value=2.5 Score=50.15 Aligned_cols=124 Identities=16% Similarity=0.101 Sum_probs=70.0
Q ss_pred ccccCCCCC--CCC--CHHH----HHHHHHHHHHhCCCCeEEEEecccc----Ch-----HHH------HHHHHh---c-
Q psy12805 494 GLISPPPHH--DIY--SIED----LAELIYDLKCANPNARISVKLVSEV----GV-----GVV------ASGVAK---G- 546 (1429)
Q Consensus 494 ~LisP~~h~--di~--sied----L~qlI~~Lk~~~~~~pV~VKLv~e~----Gv-----g~v------A~~~ak---a- 546 (1429)
...||-..+ |-| |+|. +.++|+.+|+..+.-||+|||++.. +. ..+ +..+.+ +
T Consensus 201 QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 280 (400)
T 4gbu_A 201 QFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAG 280 (400)
T ss_dssp HHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTT
T ss_pred heecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCccchhhhHHHHHHHHHHHHHhhccC
Confidence 344664443 666 7776 7889999999988789999998632 11 111 122222 2
Q ss_pred -CCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh-cchhhhcch
Q psy12805 547 -KAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL-GADEIGLST 624 (1429)
Q Consensus 547 -GaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL-GAdavg~gt 624 (1429)
..+.+.++...... ..........-.+.... +.+. .+++||+.||+.+..+++.+++- +||.|+||+
T Consensus 281 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---ir~~-------~~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR 349 (400)
T 4gbu_A 281 KRLAFVHLVEPRVTN-PFLTEGEGEYEGGSNDF---VYSI-------WKGPVIRAGNFALHPEVVREEVKDKRTLIGYGR 349 (400)
T ss_dssp CCCSEEEEECTTCSS-TTSCTTTTCCCSCCSTH---HHHH-------CCSCEEEESSCTTCHHHHHHHTTSTTEEEECCH
T ss_pred ccccceeeecccCCC-cccccccchhhhHHHHH---HHHH-------hCCCEEEeCCCCChHHHHHHHHcCCCeEhHHHH
Confidence 23455554332111 00000000011111111 1221 15789999999999888877765 589999999
Q ss_pred hHHH
Q psy12805 625 APLI 628 (1429)
Q Consensus 625 ~~L~ 628 (1429)
+++.
T Consensus 350 ~~ia 353 (400)
T 4gbu_A 350 FFIS 353 (400)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7665
No 285
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=82.95 E-value=4.5 Score=45.29 Aligned_cols=65 Identities=18% Similarity=0.070 Sum_probs=43.7
Q ss_pred HHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcc--cHHHHHHHH----
Q psy12805 540 ASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIR--TGFDVVVAA---- 613 (1429)
Q Consensus 540 A~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIr--tg~Dv~kAl---- 613 (1429)
+..+.++|||+|.++ ..+ ....+.++.+.. ..++++++||++ |..|+.+.+
T Consensus 165 ~~~a~~~GAD~vkt~-~~~----------------~~e~~~~~~~~~------~~~pV~asGGi~~~~~~~~l~~i~~~~ 221 (263)
T 1w8s_A 165 ARIALELGADAMKIK-YTG----------------DPKTFSWAVKVA------GKVPVLMSGGPKTKTEEDFLKQVEGVL 221 (263)
T ss_dssp HHHHHHHTCSEEEEE-CCS----------------SHHHHHHHHHHT------TTSCEEEECCSCCSSHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEc-CCC----------------CHHHHHHHHHhC------CCCeEEEEeCCCCCCHHHHHHHHHHHH
Confidence 456788999999987 311 223344444332 235899999999 778776555
Q ss_pred HhcchhhhcchhHH
Q psy12805 614 LLGADEIGLSTAPL 627 (1429)
Q Consensus 614 aLGAdavg~gt~~L 627 (1429)
..||+.+.+|++.+
T Consensus 222 ~aGA~GvsvgraI~ 235 (263)
T 1w8s_A 222 EAGALGIAVGRNVW 235 (263)
T ss_dssp HTTCCEEEESHHHH
T ss_pred HcCCeEEEEehhhc
Confidence 89999776666543
No 286
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=82.90 E-value=5.2 Score=44.78 Aligned_cols=103 Identities=17% Similarity=0.063 Sum_probs=71.0
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHH
Q psy12805 504 IYSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETH 583 (1429)
Q Consensus 504 i~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~ 583 (1429)
+.+.++|.++++..++.. .-+.|-+- -......+.++|+++|=|.+++=.| +-+.... +.
T Consensus 136 ~L~~~~l~~l~~~A~~lG--l~~LvEVh----~~~El~rAl~~~a~iIGINNRnL~t----------f~vdl~~----t~ 195 (258)
T 4a29_A 136 ILTERELESLLEYARSYG--MEPLILIN----DENDLDIALRIGARFIGIMSRDFET----------GEINKEN----QR 195 (258)
T ss_dssp GSCHHHHHHHHHHHHHTT--CCCEEEES----SHHHHHHHHHTTCSEEEECSBCTTT----------CCBCHHH----HH
T ss_pred hcCHHHHHHHHHHHHHHh--HHHHHhcc----hHHHHHHHhcCCCcEEEEeCCCccc----------cccCHHH----HH
Confidence 346678888888888764 33444322 2233455788999999888886443 2233221 11
Q ss_pred HHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 584 QVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 584 q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
+ |. ..+...+.+|+-+||+|..|+.++...|+++|=+|.++|-
T Consensus 196 ~-L~-~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr 238 (258)
T 4a29_A 196 K-LI-SMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMR 238 (258)
T ss_dssp H-HH-TTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHH
T ss_pred H-HH-hhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhC
Confidence 1 21 2345678899999999999999999999999999998776
No 287
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=82.80 E-value=2.2 Score=48.10 Aligned_cols=93 Identities=11% Similarity=0.071 Sum_probs=58.6
Q ss_pred CceEEEccccccccHHHHHHhCCCCcccc-----------------ccccchhhccchHHHHHHHHHHhCC--CCCCcEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNI-----------------IPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKT 1302 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~i-----------------Lp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v 1302 (1429)
.+++|||+|..|+..+..+.+.|.+|..+ .|.+...+...++.+.+.+.+++.+ +..+. +
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v 93 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED-V 93 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-E
Confidence 57999999999999999988888776111 1112111223466677777777766 33443 5
Q ss_pred EEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1303 VKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1303 ~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
..++. ++.+......+ .+++.+|.|++|+|..|
T Consensus 94 ~~i~~----~~~~~v~~~~~-g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 94 ESVSL----HGPLKSVVTAD-GQTHRARAVILAMGAAA 126 (335)
T ss_dssp EEEEC----SSSSEEEEETT-SCEEEEEEEEECCCEEE
T ss_pred EEEEe----CCcEEEEEeCC-CCEEEeCEEEECCCCCc
Confidence 55543 23343313333 34799999999999874
No 288
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=82.79 E-value=3.6 Score=50.64 Aligned_cols=93 Identities=10% Similarity=0.148 Sum_probs=62.7
Q ss_pred CceEEEccccccccHHHHHHhCCCCcccc---------------------cc----------------ccch-hhccchH
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNI---------------------IP----------------KWND-LIYHNNW 1283 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~i---------------------Lp----------------~~d~-lvf~~e~ 1283 (1429)
.+++|||||..|+.++..+.+.|.+|..+ +| .|.. .....++
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 46999999999999999988877766111 01 1110 1123467
Q ss_pred HHHHHHHHHhCCC----CCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEecc
Q psy12805 1284 SEALNQLLQTNNF----PAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMG 1337 (1429)
Q Consensus 1284 ~~al~~~Le~~G~----~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG 1337 (1429)
.+++.+..++.++ .++.+++.+++.. ..+.|.....+| +++.+|.||+|+|
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~-~~~~w~V~~~~G--~~i~ad~lV~AtG 156 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDE-EGLRWTVRTDRG--DEVSARFLVVAAG 156 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEET-TTTEEEEEETTC--CEEEEEEEEECCC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcC-CCCEEEEEECCC--CEEEeCEEEECcC
Confidence 7888888877764 5678888887752 234555444333 3699999999999
No 289
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=82.61 E-value=2.7 Score=47.60 Aligned_cols=105 Identities=18% Similarity=0.138 Sum_probs=60.6
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecC---CCCCCccccccccccCCChHH---HH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGH---DGGTGASSWTGIKNAGLPWEL---GV 579 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~---~GGTgaap~~~~~~~GiP~~l---aL 579 (1429)
+.++..++|...++.. +-.++.+.-...|+..+++|+|+|.+-=. +|-.|+. ..+.... -+
T Consensus 148 ~~~~eve~I~~A~~~g------L~Ti~~v~~~eeA~amA~agpDiI~~h~glT~gglIG~~-------~avs~~~~~e~i 214 (286)
T 2p10_A 148 SYAQEVEMIAEAHKLD------LLTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGAR-------SGKSMDDCVSLI 214 (286)
T ss_dssp CHHHHHHHHHHHHHTT------CEECCEECSHHHHHHHHHHTCSEEEEECSCC----------------CCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCC------CeEEEecCCHHHHHHHHHcCCCEEEECCCCCCCCcccCC-------CcccHHHhHHHH
Confidence 4566667777777653 22222344445677789999999997521 1112211 1122222 23
Q ss_pred HHHHHHHHhcCCCCceEEEEc-CCcccHHHHHHHHHh--cchhhhcchh
Q psy12805 580 AETHQVLALNNLRSRVVLQAD-GQIRTGFDVVVAALL--GADEIGLSTA 625 (1429)
Q Consensus 580 ~ev~q~L~~~gLR~~V~Lias-GGIrtg~Dv~kAlaL--GAdavg~gt~ 625 (1429)
.++.+...+ .+.++.++.- |||.++.|+..++-+ |++.|..++.
T Consensus 215 ~~i~~a~~~--vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASs 261 (286)
T 2p10_A 215 NECIEAART--IRDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASS 261 (286)
T ss_dssp HHHHHHHHH--HCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHH
T ss_pred HHHHHHHHH--hCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehh
Confidence 333333333 2456666655 599999999999999 9998865553
No 290
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=82.60 E-value=1.2 Score=48.22 Aligned_cols=102 Identities=14% Similarity=0.048 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEE-ecCCCCCCccccccccccCCC-hHHHHHHHHH
Q psy12805 507 IEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVI-SGHDGGTGASSWTGIKNAGLP-WELGVAETHQ 584 (1429)
Q Consensus 507 iedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~I-sG~~GGTgaap~~~~~~~GiP-~~laL~ev~q 584 (1429)
.+.+.+.++.+|+. +.+..+.+..-... ..+..+.+.|+|++.+ .+...+ ..|.+ ....+..+.+
T Consensus 95 ~~~~~~~~~~~~~~--g~~~~~d~l~~~T~-~~~~~~~~~g~d~v~~~~~~~~~----------~~g~~~~~~~l~~i~~ 161 (218)
T 3jr2_A 95 IATIAACKKVADEL--NGEIQIEIYGNWTM-QDAKAWVDLGITQAIYHRSRDAE----------LAGIGWTTDDLDKMRQ 161 (218)
T ss_dssp HHHHHHHHHHHHHH--TCEEEEECCSSCCH-HHHHHHHHTTCCEEEEECCHHHH----------HHTCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh--CCccceeeeecCCH-HHHHHHHHcCccceeeeeccccc----------cCCCcCCHHHHHHHHH
Confidence 35567777777775 45555533211122 3455567779998876 221111 12332 1223333433
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
.. . .+++|+++|||+ ..++..++..|||.+.+|++.+
T Consensus 162 ~~-~----~~~pi~v~GGI~-~~~~~~~~~aGAd~vvvGsaI~ 198 (218)
T 3jr2_A 162 LS-A----LGIELSITGGIV-PEDIYLFEGIKTKTFIAGRALA 198 (218)
T ss_dssp HH-H----TTCEEEEESSCC-GGGGGGGTTSCEEEEEESGGGS
T ss_pred Hh-C----CCCCEEEECCCC-HHHHHHHHHcCCCEEEEchhhc
Confidence 22 1 258999999995 8888889999999999998543
No 291
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=82.58 E-value=2.4 Score=47.04 Aligned_cols=92 Identities=13% Similarity=0.081 Sum_probs=58.4
Q ss_pred CceEEEccccccccHHHHHHhCCCCcccc-----------------ccccchhhccchHHHHHHHHHHhCC--CCCCcEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNI-----------------IPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKT 1302 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~i-----------------Lp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v 1302 (1429)
.+++|||+|..|+..+..+++.|.+|..+ .|.+...+...++.+.+.+.+++.+ +..+. +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 46999999999999999998888776111 1222111233466677777777776 33343 5
Q ss_pred EEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1303 VKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1303 ~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
..+.. .++.+.. ..++ .++.+|.|++|+|..|
T Consensus 85 ~~i~~---~~~~~~v-~~~~--~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 85 NKVDL---QNRPFRL-NGDN--GEYTCDALIIATGASA 116 (320)
T ss_dssp EEEEC---SSSSEEE-EESS--CEEEEEEEEECCCEEE
T ss_pred eEEEe---cCCEEEE-EeCC--CEEEcCEEEECCCCCc
Confidence 55533 2334443 2222 4689999999999874
No 292
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=82.56 E-value=1.8 Score=47.41 Aligned_cols=105 Identities=13% Similarity=0.113 Sum_probs=65.1
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
..+.+..+++. +..+++=+.+..-...+ .....++|+|.+-...+|+|.. .+......-+.++.+...++
T Consensus 101 ~~~~~~~i~~~--g~~~gv~~~p~t~~e~~--~~~~~~~D~v~~msv~pg~ggq------~~~~~~~~~i~~lr~~~~~~ 170 (230)
T 1tqj_A 101 LHRTLCQIREL--GKKAGAVLNPSTPLDFL--EYVLPVCDLILIMSVNPGFGGQ------SFIPEVLPKIRALRQMCDER 170 (230)
T ss_dssp HHHHHHHHHHT--TCEEEEEECTTCCGGGG--TTTGGGCSEEEEESSCC----C------CCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc--CCcEEEEEeCCCcHHHH--HHHHhcCCEEEEEEeccccCCc------cCcHHHHHHHHHHHHHHHhc
Confidence 44556666654 56777766443322221 1223489999887766665432 22222344566666666555
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
++ +++|.++|||.. .++..+...|||.+-+|++.+
T Consensus 171 ~~--~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~ 205 (230)
T 1tqj_A 171 GL--DPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVF 205 (230)
T ss_dssp TC--CCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHH
T ss_pred CC--CCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHH
Confidence 53 589999999997 778888889999999998644
No 293
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=81.87 E-value=1.6 Score=51.81 Aligned_cols=60 Identities=10% Similarity=0.016 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCce--EEEEeC--CCeeEEEecEEEEeccccCc
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRW--KMDEVP--NSEKIFKCDLVLLAMGFLGP 1341 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~--~~v~~~--gse~~ieaDlVLlAiG~~pp 1341 (1429)
++.+++....+..+ +..+.++..+++..+.++.| .....+ ++.+++.+|.||+|+|..|.
T Consensus 128 ~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 128 EFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTPR 193 (463)
T ss_dssp HHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEEC
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCCCC
Confidence 45555555555544 45577788887643223333 222222 23347999999999998743
No 294
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=81.35 E-value=2.7 Score=47.64 Aligned_cols=92 Identities=12% Similarity=0.203 Sum_probs=58.3
Q ss_pred CceEEEccccccccHHHHHHhCCC-Cccccc-------------------cccch------------------------h
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGC-PLGNII-------------------PKWND------------------------L 1277 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc-~V~~iL-------------------p~~d~------------------------l 1277 (1429)
.+++|||||..|+..+..+++.|. +|..+= |.+.. .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 369999999999999999988887 661110 00000 0
Q ss_pred hccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEecccc
Q psy12805 1278 IYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1278 vf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~ 1339 (1429)
+...++.+.+.+.++..+ +..+.++..+... ++.+.... .++ ++.+|.||+|+|..
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~---~~~~~v~~-~~g--~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISAD---DAYYTIAT-TTE--TYHADYIFVATGDY 142 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC---SSSEEEEE-SSC--CEEEEEEEECCCST
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEC---CCeEEEEe-CCC--EEEeCEEEECCCCC
Confidence 111245566666777776 4557777777552 23444333 332 48999999999986
No 295
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=81.08 E-value=3.2 Score=44.87 Aligned_cols=104 Identities=15% Similarity=0.137 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCC-CCCCccccccccccCCChHHHHHHHHHHHHh
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHD-GGTGASSWTGIKNAGLPWELGVAETHQVLAL 588 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~-GGTgaap~~~~~~~GiP~~laL~ev~q~L~~ 588 (1429)
+.+.++.+++. +..+++=+.+......+ .....++|+|.+.+.. |.+|.+ ..-.....+.++.+.+..
T Consensus 107 ~~~~~~~~~~~--g~~ig~~~~p~t~~e~~--~~~~~~~d~vl~~~~~pg~~g~~-------~~~~~~~~i~~l~~~~~~ 175 (230)
T 1rpx_A 107 LHRTINQIKSL--GAKAGVVLNPGTPLTAI--EYVLDAVDLVLIMSVNPGFGGQS-------FIESQVKKISDLRKICAE 175 (230)
T ss_dssp HHHHHHHHHHT--TSEEEEEECTTCCGGGG--TTTTTTCSEEEEESSCTTCSSCC-------CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc--CCcEEEEeCCCCCHHHH--HHHHhhCCEEEEEEEcCCCCCcc-------ccHHHHHHHHHHHHHHHh
Confidence 34556666654 45666665433222211 1234689999887765 332221 111123334555554433
Q ss_pred cCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 589 NNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 589 ~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
.+ ..++++++|||+ ..++..++..||+.+.+|++.+
T Consensus 176 ~~--~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~ 211 (230)
T 1rpx_A 176 RG--LNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVF 211 (230)
T ss_dssp HT--CCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHH
T ss_pred cC--CCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhh
Confidence 32 257899999999 7888888888999999998644
No 296
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=80.81 E-value=5.8 Score=43.69 Aligned_cols=67 Identities=22% Similarity=0.077 Sum_probs=46.1
Q ss_pred HHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchh
Q psy12805 540 ASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADE 619 (1429)
Q Consensus 540 A~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAda 619 (1429)
|..+.-.|..+|.+++ .|.++ + ...+.++.+.+ ..++|++-|||+|+.++.+++ .|||.
T Consensus 146 a~~a~~~g~~~VYld~-sG~~~------------~-~~~i~~i~~~~------~~~Pv~vGGGI~t~e~a~~~~-~gAD~ 204 (228)
T 3vzx_A 146 ARVSELLQLPIFYLEY-SGVLG------------D-IEAVKKTKAVL------ETSTLFYGGGIKDAETAKQYA-EHADV 204 (228)
T ss_dssp HHHHHHTTCSEEEEEC-TTSCC------------C-HHHHHHHHHHC------SSSEEEEESSCCSHHHHHHHH-TTCSE
T ss_pred HHHHHHcCCCEEEecC-CCCcC------------C-HHHHHHHHHhc------CCCCEEEeCCCCCHHHHHHHH-hCCCE
Confidence 3333445789999998 45431 1 22334443321 148999999999999998877 79999
Q ss_pred hhcchhHH
Q psy12805 620 IGLSTAPL 627 (1429)
Q Consensus 620 vg~gt~~L 627 (1429)
|-+|+++.
T Consensus 205 VVVGSa~v 212 (228)
T 3vzx_A 205 IVVGNAVY 212 (228)
T ss_dssp EEECTHHH
T ss_pred EEEChHHh
Confidence 99999654
No 297
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=79.92 E-value=0.89 Score=48.89 Aligned_cols=45 Identities=27% Similarity=0.175 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 577 LGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 577 laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
-.+.++.+.+ +++||+.|+|+|..||..|+..||++|-.++..|+
T Consensus 140 ~iI~~i~~~~-------~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW 184 (192)
T 3kts_A 140 EQVQKMTQKL-------HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLW 184 (192)
T ss_dssp HHHHHHHHHH-------CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGG
T ss_pred HHHHHHHHhc-------CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHh
Confidence 3456666554 68999999999999999999999999977775554
No 298
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=79.60 E-value=4.6 Score=43.10 Aligned_cols=105 Identities=11% Similarity=0.035 Sum_probs=59.3
Q ss_pred HHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcC
Q psy12805 511 AELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNN 590 (1429)
Q Consensus 511 ~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~g 590 (1429)
...++.+++. +.++++-+.+...... ......++|+|.+.+.+.|.+.. ..+.....-+.++.+.+...+
T Consensus 99 ~~~~~~~~~~--g~~i~~~~~~~t~~e~--~~~~~~~~d~vl~~~~~~g~~g~------~~~~~~~~~i~~~~~~~~~~~ 168 (220)
T 2fli_A 99 HGALQKIKAA--GMKAGVVINPGTPATA--LEPLLDLVDQVLIMTVNPGFGGQ------AFIPECLEKVATVAKWRDEKG 168 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEECTTSCGGG--GGGGTTTCSEEEEESSCTTCSSC------CCCGGGHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHc--CCcEEEEEcCCCCHHH--HHHHHhhCCEEEEEEECCCCccc------ccCHHHHHHHHHHHHHHHhcC
Confidence 3455555553 4566665532222211 11223569999886554332211 111112233444544443332
Q ss_pred CCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 591 LRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 591 LR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
..++++++|||+ ..++..++.+||+.+-+|++.+-
T Consensus 169 --~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~ 203 (220)
T 2fli_A 169 --LSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFK 203 (220)
T ss_dssp --CCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHT
T ss_pred --CCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhC
Confidence 257899999999 78888888889999999986543
No 299
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=79.55 E-value=2.7 Score=51.72 Aligned_cols=94 Identities=14% Similarity=0.270 Sum_probs=62.9
Q ss_pred CceEEEccccccccHHHHHHhCCCCcccc--------------cc-----------------------ccchh-hccchH
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNI--------------IP-----------------------KWNDL-IYHNNW 1283 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~i--------------Lp-----------------------~~d~l-vf~~e~ 1283 (1429)
.+++|||||..|+.++..+.+.|.+|..+ .| .|... ....++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 46999999999999999888888776111 11 11111 123467
Q ss_pred HHHHHHHHHhCC----CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccc
Q psy12805 1284 SEALNQLLQTNN----FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGF 1338 (1429)
Q Consensus 1284 ~~al~~~Le~~G----~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~ 1338 (1429)
.+.+....++.+ +.++.++..+++.. .++.|.... .+ .+++.+|.||+|+|.
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~-~~~~w~V~~-~~-G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVE-NDRLWEVTL-DN-EEVVTCRFLISATGP 145 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEG-GGTEEEEEE-TT-TEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeC-CCCEEEEEE-CC-CCEEEeCEEEECcCC
Confidence 777777777655 35678888887753 234555443 33 347999999999993
No 300
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=79.38 E-value=2.6 Score=51.71 Aligned_cols=94 Identities=13% Similarity=0.215 Sum_probs=62.3
Q ss_pred CceEEEccccccccHHHHHH-hCCCCcccc--------------cc-----------------------ccch-hhccch
Q psy12805 1242 KGLRIQAARCMECGVPFCQS-SHGCPLGNI--------------IP-----------------------KWND-LIYHNN 1282 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s-~~Gc~V~~i--------------Lp-----------------------~~d~-lvf~~e 1282 (1429)
-+++|||||..|+.++..+. ..|.+|..+ .| .|.. .....+
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 36999999999999999998 778776111 01 1100 012346
Q ss_pred HHHHHHHHHHhCCC----CCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccc
Q psy12805 1283 WSEALNQLLQTNNF----PAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGF 1338 (1429)
Q Consensus 1283 ~~~al~~~Le~~G~----~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~ 1338 (1429)
+.+++.+..++.++ .++.++..+++.. ..+.|.....+| +++.+|.||+|+|.
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~-~~~~~~V~~~~G--~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLD-DENLWEVTTDHG--EVYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEET-TTTEEEEEETTS--CEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeC-CCCEEEEEEcCC--CEEEeCEEEECCcc
Confidence 77778887777764 4477888887742 234555443333 37899999999995
No 301
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=78.36 E-value=2.9 Score=45.51 Aligned_cols=107 Identities=22% Similarity=0.176 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCC-CCCccccccccccCCChHHHHHHHHHH
Q psy12805 507 IEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDG-GTGASSWTGIKNAGLPWELGVAETHQV 585 (1429)
Q Consensus 507 iedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~G-GTgaap~~~~~~~GiP~~laL~ev~q~ 585 (1429)
.+++.+++...++. +..+++=+.+. .....+.+.++++|-+..... |||.... .. .| ..+.++++.
T Consensus 97 ~~e~~~~~~~a~~~--Gl~~iv~v~~~----~e~~~~~~~~~~~i~~~~~~~iGtG~~~~----t~-~~--~~~~~~~~~ 163 (219)
T 2h6r_A 97 LADIEAVINKCKNL--GLETIVCTNNI----NTSKAVAALSPDCIAVEPPELIGTGIPVS----KA-NP--EVVEGTVRA 163 (219)
T ss_dssp HHHHHHHHHHHHHH--TCEEEEEESSS----HHHHHHTTTCCSEEEECCCC---------------------CSHHHHHH
T ss_pred HHHHHHHHHHHHHC--CCeEEEEeCCc----hHHHHHHhCCCCEEEEEeccccccCCCCc----cC-CH--HHHHHHHHH
Confidence 46678888887776 44455543321 223445667889988876653 4653100 00 01 112233343
Q ss_pred HHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 586 LALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 586 L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
+... ...++|++.|||+++.|+..+...|||.+-+|++.+-
T Consensus 164 ir~~--~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~ 204 (219)
T 2h6r_A 164 VKEI--NKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVK 204 (219)
T ss_dssp HHHH--CTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHT
T ss_pred HHhc--cCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhC
Confidence 3322 2368999999999999999999999999999987664
No 302
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=78.25 E-value=4.2 Score=47.75 Aligned_cols=95 Identities=18% Similarity=0.076 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHH
Q psy12805 505 YSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQ 584 (1429)
Q Consensus 505 ~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q 584 (1429)
.++|++++.+...+ .++.+-+.........+..+.++|+|+|+|+...|.+ . .+.+..+
T Consensus 75 ~s~ee~~~~i~~~~-----~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~-------------~---~~~e~I~ 133 (361)
T 3r2g_A 75 MTIEENIQEFKKCK-----GPVFVSVGCTENELQRAEALRDAGADFFCVDVAHAHA-------------K---YVGKTLK 133 (361)
T ss_dssp SCHHHHHHHHHTCC-----SCCBEEECSSHHHHHHHHHHHHTTCCEEEEECSCCSS-------------H---HHHHHHH
T ss_pred CCHHHHHHHHhhcc-----eEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCc-------------H---hHHHHHH
Confidence 68898887665442 2222222111112345677889999999998654421 0 1122223
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcc
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLS 623 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~g 623 (1429)
.+++.- ..++|++ |++.|..|+..+..+|||++-+|
T Consensus 134 ~ir~~~--~~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 134 SLRQLL--GSRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHH--TTCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHhc--CCCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 333220 1366775 67999999999999999998764
No 303
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=78.22 E-value=4.1 Score=42.93 Aligned_cols=73 Identities=22% Similarity=0.150 Sum_probs=50.0
Q ss_pred HHHHHHHHhcCCcEEEEec--CCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHH
Q psy12805 537 GVVASGVAKGKAEHIVISG--HDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAAL 614 (1429)
Q Consensus 537 g~vA~~~akaGaD~I~IsG--~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla 614 (1429)
......+...++..+.+.+ ..| + .-|+. +..+++.. -+.++++|+.||+.+..|+.+++.
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g-~---------~~g~~----~~~i~~~~----~~~~~Pvia~~g~~~~~~~~~~~~ 194 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDG-T---------KSGYD----TEMIRFVR----PLTTLPIIASGGAGKMEHFLEAFL 194 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTT-C---------CSCCC----HHHHHHHG----GGCCSCEEEESCCCSHHHHHHHHH
T ss_pred HHHHHHHhhcCCCeEEEEecCCCC-c---------ccccc----HHHHHHHH----HhcCCCEEecCCCCCHHHHHHHHH
Confidence 3455667778888777766 332 2 12333 22233322 123689999999999999999999
Q ss_pred hcchhhhcchhHH
Q psy12805 615 LGADEIGLSTAPL 627 (1429)
Q Consensus 615 LGAdavg~gt~~L 627 (1429)
.||+.+-+|++++
T Consensus 195 ~G~~~~~vg~a~~ 207 (237)
T 3cwo_X 195 AGADAALAASVFH 207 (237)
T ss_dssp HTCSEEEESHHHH
T ss_pred cCcHHHhhhHHHH
Confidence 9999998888654
No 304
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=78.09 E-value=4.8 Score=42.90 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=29.6
Q ss_pred ceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 594 RVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 594 ~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
+++|+++|||. ..|+..++.+||+.|.+|++.+
T Consensus 148 ~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~ 180 (212)
T 2v82_A 148 DIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLY 180 (212)
T ss_dssp TCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTC
T ss_pred CCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHh
Confidence 58999999997 9999999999999999998544
No 305
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=78.08 E-value=4.8 Score=46.55 Aligned_cols=54 Identities=7% Similarity=0.117 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHhC-C--CCCCcEEEEEEEeecCCCce--EEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1282 NWSEALNQLLQTN-N--FPAGIKTVKVEWTKDATGRW--KMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1282 e~~~al~~~Le~~-G--~~~gv~v~~Ve~~k~~~G~~--~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
++.+.+.+.+++. | +..+.+++.++.. ++.+ ... ..++ +++++|.||.|.|...
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~---~~~v~g~v~-~~~g-~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRD---ERHAIDQVR-LNDG-RVLRPRVVVGADGIAS 166 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEEC---TTSCEEEEE-ETTS-CEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEc---CCceEEEEE-ECCC-CEEECCEEEECCCCCh
Confidence 5666777777665 5 5667888888652 2334 333 3333 3799999999999873
No 306
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=77.81 E-value=3.5 Score=45.97 Aligned_cols=94 Identities=13% Similarity=0.097 Sum_probs=50.1
Q ss_pred ceEEEccccccccHHHHHHhCCCCcc---------ccc---cccc--hhhccchHHHHHHHHHHhCC-CC-CCcEEEEEE
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPLG---------NII---PKWN--DLIYHNNWSEALNQLLQTNN-FP-AGIKTVKVE 1306 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V~---------~iL---p~~d--~lvf~~e~~~al~~~Le~~G-~~-~gv~v~~Ve 1306 (1429)
.++|||||.-|+..|.-.++.|.+|. .+. |.+. +.+...++.+...+.+.+.+ .. ....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 48999999999988877777888771 111 1111 01112234443333333332 11 111222222
Q ss_pred EeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1307 WTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1307 ~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
. ..++.++... .+ .+++.+|.||+|+|.+|
T Consensus 88 ~--~~~~~~~v~~-~~-g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 88 K--QSTGLFEIVT-KD-HTKYLAERVLLATGMQE 117 (304)
T ss_dssp E--CTTSCEEEEE-TT-CCEEEEEEEEECCCCEE
T ss_pred e--cCCCcEEEEE-CC-CCEEEeCEEEEccCCcc
Confidence 2 2344444333 32 34799999999999874
No 307
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=77.54 E-value=1.2 Score=54.77 Aligned_cols=48 Identities=21% Similarity=0.243 Sum_probs=37.2
Q ss_pred CCEEecCCCCccCCCCEEEeCCCC-CC--------CCcHHHHHHHHHHHHHHHHHHHh
Q psy12805 1357 SNYSTVEKTYLTTVPRVYAAGDCR-RG--------QSLVVWAISEGRQAAREIDSFLM 1405 (1429)
Q Consensus 1357 G~I~VD~~~~~TSvPgVFAAGD~a-~g--------~~lvv~Ai~qGr~AA~nI~~~L~ 1405 (1429)
|.|.||. ..+|++||+||||+|+ .+ ...+..|+--|+.|++++..++.
T Consensus 355 GGi~vd~-~~~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~~ 411 (540)
T 1chu_A 355 GGVMVDD-HGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMP 411 (540)
T ss_dssp CEEECCT-TCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CcEEECC-CCCCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 5577876 6789999999999997 32 23456788889999999988764
No 308
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=77.52 E-value=4.4 Score=48.95 Aligned_cols=101 Identities=13% Similarity=0.039 Sum_probs=69.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHH
Q psy12805 505 YSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQ 584 (1429)
Q Consensus 505 ~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q 584 (1429)
.+.++|.++++..++. +..+.|- +--...+..+.++|+|+|-+..++=.| ....... ..+..+
T Consensus 141 l~~~~l~~l~~~a~~l--gm~~LvE----vh~~eE~~~A~~lga~iIGinnr~L~t----------~~~dl~~-~~~L~~ 203 (452)
T 1pii_A 141 LDDDQYRQLAAVAHSL--EMGVLTE----VSNEEEQERAIALGAKVVGINNRDLRD----------LSIDLNR-TRELAP 203 (452)
T ss_dssp CCHHHHHHHHHHHHHT--TCEEEEE----ECSHHHHHHHHHTTCSEEEEESEETTT----------TEECTHH-HHHHHH
T ss_pred CCHHHHHHHHHHHHHc--CCeEEEE----eCCHHHHHHHHHCCCCEEEEeCCCCCC----------CCCCHHH-HHHHHH
Confidence 4557888888888876 4455554 323344566889999999998876433 1122111 122222
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
.+ ...+.+|+-|||.|+.|+.++..+ |++|-+|++.|-
T Consensus 204 ~i-----p~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr 241 (452)
T 1pii_A 204 KL-----GHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMA 241 (452)
T ss_dssp HH-----CTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHT
T ss_pred hC-----CCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcC
Confidence 22 235789999999999999999999 999999997664
No 309
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=77.45 E-value=5.5 Score=45.25 Aligned_cols=94 Identities=15% Similarity=0.141 Sum_probs=60.7
Q ss_pred CceEEEccccccccHHHHHHhCCCCcccc-------------ccc---cch----hhccchHHHHHHHHHHhCC--CCCC
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNI-------------IPK---WND----LIYHNNWSEALNQLLQTNN--FPAG 1299 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~i-------------Lp~---~d~----lvf~~e~~~al~~~Le~~G--~~~g 1299 (1429)
.+++|||||..|+..+..++..|.+|..+ .|. ++. .+...++.+.+.+.++..+ +..+
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 94 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLN 94 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEcC
Confidence 46999999999999999988888877111 111 000 0112456667777777666 3456
Q ss_pred cEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEecccc
Q psy12805 1300 IKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1300 v~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~ 1339 (1429)
.++..+.+. .++.+.... .++ +++.+|.||+|+|..
T Consensus 95 ~~v~~i~~~--~~~~~~v~~-~~g-~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 95 ETVTKYTKL--DDGTFETRT-NTG-NVYRSRAVLIAAGLG 130 (360)
T ss_dssp CCEEEEEEC--TTSCEEEEE-TTS-CEEEEEEEEECCTTC
T ss_pred CEEEEEEEC--CCceEEEEE-CCC-cEEEeeEEEEccCCC
Confidence 777777653 233444333 332 469999999999984
No 310
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=77.41 E-value=2.1 Score=50.74 Aligned_cols=94 Identities=12% Similarity=0.057 Sum_probs=50.9
Q ss_pred CCceEEEccccccccHHHHHHhC--CCCcc-----c-------cccccch-hhccchHHHHHHHHH-HhCC--CCCCcEE
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSH--GCPLG-----N-------IIPKWND-LIYHNNWSEALNQLL-QTNN--FPAGIKT 1302 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~--Gc~V~-----~-------iLp~~d~-lvf~~e~~~al~~~L-e~~G--~~~gv~v 1302 (1429)
..+++|||||..|+..+..+++. |.+|. . .+|.+.. .....++.....+.+ +..+ +..+.++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 46799999999999999998876 55661 1 1121110 000011111111222 4455 4456666
Q ss_pred EEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1303 VKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1303 ~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
..+.. + .+. +...++.+++.+|.|++|+|.+|
T Consensus 83 ~~i~~----~-~~~-v~~~~g~~~~~~d~lviAtG~~p 114 (449)
T 3kd9_A 83 IEVDT----G-YVR-VRENGGEKSYEWDYLVFANGASP 114 (449)
T ss_dssp EEECS----S-EEE-EECSSSEEEEECSEEEECCCEEE
T ss_pred EEEec----C-CCE-EEECCceEEEEcCEEEECCCCCC
Confidence 66632 1 222 23444445899999999999874
No 311
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=77.27 E-value=3.5 Score=45.96 Aligned_cols=101 Identities=12% Similarity=-0.041 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+++.+++...+.. +.-+.|- -.+... +..+.+.|+|+|-+...+-.+ .+... ..+.+..+.+.
T Consensus 141 ~~l~~l~~~a~~l--Gl~~lve---v~~~~E-~~~a~~~gad~IGvn~~~l~~----------~~~dl-~~~~~L~~~i~ 203 (254)
T 1vc4_A 141 ELTGAYLEEARRL--GLEALVE---VHTERE-LEIALEAGAEVLGINNRDLAT----------LHINL-ETAPRLGRLAR 203 (254)
T ss_dssp GGHHHHHHHHHHH--TCEEEEE---ECSHHH-HHHHHHHTCSEEEEESBCTTT----------CCBCT-THHHHHHHHHH
T ss_pred HHHHHHHHHHHHC--CCeEEEE---ECCHHH-HHHHHHcCCCEEEEccccCcC----------CCCCH-HHHHHHHHhCc
Confidence 4566666655554 2222222 124433 456788899999888775321 12221 12223333332
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
..+ ..+++++.|||.|..|+.++.. ||++|-+|++.|-
T Consensus 204 ~~~--~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~ 241 (254)
T 1vc4_A 204 KRG--FGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMR 241 (254)
T ss_dssp HTT--CCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHT
T ss_pred ccc--CCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcC
Confidence 211 1478999999999999999999 9999999997664
No 312
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=77.01 E-value=4.5 Score=45.23 Aligned_cols=97 Identities=10% Similarity=-0.033 Sum_probs=57.7
Q ss_pred CceEEEccccccccHHHHHHhCCCCcccc-----------------ccccchhhccchHHHHHHHHHHhCCCCC-CcEEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNI-----------------IPKWNDLIYHNNWSEALNQLLQTNNFPA-GIKTV 1303 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~i-----------------Lp~~d~lvf~~e~~~al~~~Le~~G~~~-gv~v~ 1303 (1429)
.+++|||||..|+..+..+++.|.+|..+ .|.+...+...++.+.+.+.+++.++.. ..++.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~v~ 88 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEMDEVQ 88 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEeeeEE
Confidence 46999999999999999988888877111 1111111122356667777777766321 12444
Q ss_pred EEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1304 KVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1304 ~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+......++.+.....++ +++.+|.||+|+|..|
T Consensus 89 ~i~~~~~~~~~~~v~~~~g--~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 89 GVQHDATSHPYPFTVRGYN--GEYRAKAVILATGADP 123 (325)
T ss_dssp EEEECTTSSSCCEEEEESS--CEEEEEEEEECCCEEE
T ss_pred EEEeccCCCceEEEEECCC--CEEEeCEEEECcCCCc
Confidence 4533200122144333333 3799999999999874
No 313
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=76.96 E-value=3.8 Score=45.32 Aligned_cols=93 Identities=12% Similarity=0.029 Sum_probs=53.2
Q ss_pred ceEEEccccccccHHHHHHhCCCCcccc-------------c---------cccchhhccchHHHHHHHHHHhCCCCC-C
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPLGNI-------------I---------PKWNDLIYHNNWSEALNQLLQTNNFPA-G 1299 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V~~i-------------L---------p~~d~lvf~~e~~~al~~~Le~~G~~~-g 1299 (1429)
.++|||||.-|+..|...++.|.+|..+ + |.+.+.+...++.+.+.+.++..+... .
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIIT 85 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEE
Confidence 5899999999999888888777766100 1 111111223456666666666665321 1
Q ss_pred cEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1300 IKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1300 v~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
..+..+.. ...... ... ++..++.+|.||+|+|..|
T Consensus 86 ~~v~~~~~---~~~~~~-~~~-~~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 86 ETIDHVDF---STQPFK-LFT-EEGKEVLTKSVIIATGATA 121 (314)
T ss_dssp CCEEEEEC---SSSSEE-EEE-TTCCEEEEEEEEECCCEEE
T ss_pred eEEEEeec---CCCceE-EEE-CCCeEEEEeEEEEcccccc
Confidence 12222211 122222 222 3345799999999999874
No 314
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=76.59 E-value=15 Score=40.23 Aligned_cols=100 Identities=25% Similarity=0.233 Sum_probs=67.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecccc-ChHHH--------------------HHHHHhcCCcEEEEecCCCCCCcc
Q psy12805 505 YSIEDLAELIYDLKCANPNARISVKLVSEV-GVGVV--------------------ASGVAKGKAEHIVISGHDGGTGAS 563 (1429)
Q Consensus 505 ~siedL~qlI~~Lk~~~~~~pV~VKLv~e~-Gvg~v--------------------A~~~akaGaD~I~IsG~~GGTgaa 563 (1429)
++.|...+.-.+|.+..| .|.||+++.. |+..+ |..++++|+++|-.
T Consensus 70 ~d~e~~i~eA~~l~~~~~--nv~IKIP~T~eGl~A~~~L~~~GI~vN~TliFS~~Qa~~aa~AGa~~iSp---------- 137 (223)
T 1wx0_A 70 LEAEAMVAEGRRLAAIHP--NIVVKLPTTEEGLKACKRLSAEGIKVNMTLIFSANQALLAARAGASYVSP---------- 137 (223)
T ss_dssp SSHHHHHHHHHHHHHHCT--TEEEEEESSHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEE----------
T ss_pred CCHHHHHHHHHHHHhhCC--CEEEEeCCCHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHCCCeEEEe----------
Confidence 455666666666666654 4888887643 33321 22244556554432
Q ss_pred ccc-cccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhh
Q psy12805 564 SWT-GIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEI 620 (1429)
Q Consensus 564 p~~-~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdav 620 (1429)
.. -++++|.|-...+.++++.+..++.+ ..+++. ++|+..++..+.++|+|.+
T Consensus 138 -FVgRidd~g~~G~~~v~~i~~~~~~~~~~--t~vl~A-S~r~~~~v~~~~l~G~d~~ 191 (223)
T 1wx0_A 138 -FLGRVDDISWDGGELLREIVEMIQVQDLP--VKVIAA-SIRHPRHVTEAALLGADIA 191 (223)
T ss_dssp -BHHHHHHTTSCHHHHHHHHHHHHHHTTCS--CEEEEB-CCCSHHHHHHHHHTTCSEE
T ss_pred -ccchHhhcCCCHHHHHHHHHHHHHHcCCC--eEEeec-ccCCHHHHHHHHHhCCCEE
Confidence 22 25678888899999999999988864 455543 7999999999999998864
No 315
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=76.42 E-value=4.2 Score=45.49 Aligned_cols=93 Identities=15% Similarity=0.247 Sum_probs=58.1
Q ss_pred CceEEEccccccccHHHHHHhCCCCcccc-------------ccc---cc----hhhccchHHHHHHHHHHhCC--CCCC
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNI-------------IPK---WN----DLIYHNNWSEALNQLLQTNN--FPAG 1299 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~i-------------Lp~---~d----~lvf~~e~~~al~~~Le~~G--~~~g 1299 (1429)
.+++|||||..|+..+..++..|.+|..+ .|. ++ ..+...++.+.+.+.++..+ +..+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 46999999999999999888888777111 111 00 00112356666666666655 3346
Q ss_pred cEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEecccc
Q psy12805 1300 IKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1300 v~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~ 1339 (1429)
.++..++.. ++.+... ..+ .+++.+|.||+|+|..
T Consensus 86 ~~v~~i~~~---~~~~~v~-~~~-g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLERE---GDLFKVT-TSQ-GNAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEE---TTEEEEE-ETT-SCEEEEEEEEECCTTS
T ss_pred CEEEEEEEC---CCEEEEE-ECC-CCEEEeCEEEECCCCC
Confidence 677777553 2234333 232 2469999999999984
No 316
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=76.11 E-value=4.5 Score=45.04 Aligned_cols=91 Identities=10% Similarity=0.168 Sum_probs=56.9
Q ss_pred CceEEEccccccccHHHHHHhCCCCcccc-----------------ccccchhhccchHHHHHHHHHHhCC--CCCCcEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNI-----------------IPKWNDLIYHNNWSEALNQLLQTNN--FPAGIKT 1302 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~i-----------------Lp~~d~lvf~~e~~~al~~~Le~~G--~~~gv~v 1302 (1429)
.+++|||+|..|+..+..+++.|.+|..+ .|.+ ..+...++.+.+.+.+++.+ +.. .++
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 94 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGF-KSIVGSELAKLFADHAANYAKIREG-VEV 94 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTB-SSBCHHHHHHHHHHHHHTTSEEEET-CCE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCC-cccCHHHHHHHHHHHHHHcCCEEEE-eeE
Confidence 46999999999999999998888777111 1111 11122355666666666666 323 345
Q ss_pred EEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1303 VKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1303 ~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
..+... ++.+.. ..++ .++.+|.||+|+|..|
T Consensus 95 ~~i~~~---~~~~~v-~~~~--~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 95 RSIKKT---QGGFDI-ETND--DTYHAKYVIITTGTTH 126 (319)
T ss_dssp EEEEEE---TTEEEE-EESS--SEEEEEEEEECCCEEE
T ss_pred EEEEEe---CCEEEE-EECC--CEEEeCEEEECCCCCc
Confidence 555432 233332 2333 3689999999999874
No 317
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=75.60 E-value=1.6 Score=55.13 Aligned_cols=48 Identities=13% Similarity=0.061 Sum_probs=37.9
Q ss_pred CCEEecCCCCccCCCCEEEeCCCCC-C--------CCcHHHHHHHHHHHHHHHHHHHh
Q psy12805 1357 SNYSTVEKTYLTTVPRVYAAGDCRR-G--------QSLVVWAISEGRQAAREIDSFLM 1405 (1429)
Q Consensus 1357 G~I~VD~~~~~TSvPgVFAAGD~a~-g--------~~lvv~Ai~qGr~AA~nI~~~L~ 1405 (1429)
|.|.||. ..+|++||+||||+|+. + ...+..|+--|+.|+.++..++.
T Consensus 373 GGi~vd~-~~~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 373 GGIRTDY-RGEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp CEEECCT-TSBCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEECC-CCceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 5588886 78899999999999742 1 23456778889999999988875
No 318
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=75.25 E-value=5.4 Score=46.98 Aligned_cols=69 Identities=17% Similarity=0.259 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeec-CCCceEEEEeCCCeeEEEecEEEEeccccCch--------hhhhhccC
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKD-ATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPE--------RYIANELD 1350 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~-~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~--------~~Lle~lG 1350 (1429)
++.+.+.+.+++.| +.++.+++.+....+ .++.+.. ...+ . ++.||.||+|+|..+.. ..+++.+|
T Consensus 110 ~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v-~~~~-g-~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G 186 (401)
T 2gqf_A 110 QIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVL-QVNS-T-QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFG 186 (401)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEE-EETT-E-EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEE-EECC-C-EEECCEEEECCCCccCCCCCCChHHHHHHHHCC
Confidence 34456666666666 456777877754210 0233433 2333 3 69999999999987521 23566666
Q ss_pred ccc
Q psy12805 1351 LTL 1353 (1429)
Q Consensus 1351 Lel 1353 (1429)
+++
T Consensus 187 ~~i 189 (401)
T 2gqf_A 187 IPV 189 (401)
T ss_dssp CCE
T ss_pred CCc
Confidence 655
No 319
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=74.25 E-value=4.1 Score=46.88 Aligned_cols=92 Identities=11% Similarity=0.208 Sum_probs=60.9
Q ss_pred CCceEEEccccccccHHHHHHhCCCCcc-----cccc-----------------c---cch-------------------
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGCPLG-----NIIP-----------------K---WND------------------- 1276 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc~V~-----~iLp-----------------~---~d~------------------- 1276 (1429)
+.+++|||||..|+.++..+++.|.+|. .... . ++.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 4579999999999999999998887771 0000 0 000
Q ss_pred ------------hhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1277 ------------LIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1277 ------------lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+...++.+.+.+.+++.| +..+.+++.++. ++ .. ...++ +++++|.||.|.|...
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~----~~--~v-~~~~g-~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP----VG--RL-TLQTG-EVLEADLIVGADGVGS 160 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET----TT--EE-EETTS-CEEECSEEEECCCTTC
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe----CC--EE-EECCC-CEEEcCEEEECCCccH
Confidence 0111355777777777776 556778887753 33 22 23333 3799999999999874
No 320
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=73.62 E-value=7.3 Score=44.80 Aligned_cols=57 Identities=14% Similarity=0.059 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEE-eCCCeeEEEecEEEEeccccCc
Q psy12805 1283 WSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDE-VPNSEKIFKCDLVLLAMGFLGP 1341 (1429)
Q Consensus 1283 ~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~-~~gse~~ieaDlVLlAiG~~pp 1341 (1429)
+.+.+.+.+.+.| +..+.+++.++.. +++.+.... .+|+..++.+|+||.|.|....
T Consensus 105 l~~~L~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 105 VTRDLMEAREACGATTVYQAAEVRLHDL--QGERPYVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEECT--TSSSCEEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred HHHHHHHHHHhcCCeEEeceeEEEEEEe--cCCceEEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 4455555555555 5667888888542 223333333 3454447999999999998743
No 321
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=73.50 E-value=2 Score=50.65 Aligned_cols=49 Identities=22% Similarity=0.214 Sum_probs=37.5
Q ss_pred ccCccccCCCCEEecCCCCc-cCCCCEEEeCCCCC-----CCCcHHHHHHHHHHHHHHHH
Q psy12805 1348 ELDLTLDPRSNYSTVEKTYL-TTVPRVYAAGDCRR-----GQSLVVWAISEGRQAAREID 1401 (1429)
Q Consensus 1348 ~lGLeld~~G~I~VD~~~~~-TSvPgVFAAGD~a~-----g~~lvv~Ai~qGr~AA~nI~ 1401 (1429)
.-||.+++ +|+.+|+ +.+||+|+||++.+ +-...+||...|..|++++.
T Consensus 345 ~GGv~~~~-----~~~~tmes~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 345 MGGVDTKV-----ISSKTMESNQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp EEEECGGG-----BCTTTCBBSSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccc-----CChhhccccCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 33555554 5645777 48999999998875 34678999999999999874
No 322
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=73.15 E-value=2.5 Score=53.07 Aligned_cols=42 Identities=31% Similarity=0.539 Sum_probs=34.4
Q ss_pred CCccCCCCEEEeCCCCCC--CCcHHHHHHHHHHHHHHHHHHHhC
Q psy12805 1365 TYLTTVPRVYAAGDCRRG--QSLVVWAISEGRQAAREIDSFLMG 1406 (1429)
Q Consensus 1365 ~~~TSvPgVFAAGD~a~g--~~lvv~Ai~qGr~AA~nI~~~L~g 1406 (1429)
..+|++||+||||+|+.+ ..+...+..+|++|++++..++..
T Consensus 426 ~~~t~I~GLyAaGe~a~~~~~r~~~~sl~~G~~ag~~aa~~~~~ 469 (643)
T 1jnr_A 426 NRMTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRFILE 469 (643)
T ss_dssp TTBCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCceeCCEEeeeccccccccccchhHHHHHHHHHHHHHHHHhc
Confidence 457999999999999764 345667889999999999988854
No 323
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=73.12 E-value=6.1 Score=45.68 Aligned_cols=161 Identities=13% Similarity=0.102 Sum_probs=86.7
Q ss_pred CceEEEccccccccHHHHHHhC--CCCccccc----c---------------------cc-chh--h-----------cc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSH--GCPLGNII----P---------------------KW-NDL--I-----------YH 1280 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~--Gc~V~~iL----p---------------------~~-d~l--v-----------f~ 1280 (1429)
-+++|||+|..|+..+..+++. |.+|..+- + .| ..+ . ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 4799999999999999988876 77761000 0 00 000 0 11
Q ss_pred chHHHHHHHHHHhC-C--CCCCcEEEEEEEeecCC-C--ceEEEEe-------CC------CeeEEEe------------
Q psy12805 1281 NNWSEALNQLLQTN-N--FPAGIKTVKVEWTKDAT-G--RWKMDEV-------PN------SEKIFKC------------ 1329 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~-G--~~~gv~v~~Ve~~k~~~-G--~~~~v~~-------~g------se~~iea------------ 1329 (1429)
.++...+.+.+.+. | +..+.++..+....+.+ | ++.-+.. .+ +..++.|
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 23344555555553 5 45577777775532213 3 4332221 11 3457999
Q ss_pred ---cEEEEeccccCchhhhhhc-cCccccCCCC--------------EEecCCCCc-cCCCCEEEeCCCCC--------C
Q psy12805 1330 ---DLVLLAMGFLGPERYIANE-LDLTLDPRSN--------------YSTVEKTYL-TTVPRVYAAGDCRR--------G 1382 (1429)
Q Consensus 1330 ---DlVLlAiG~~pp~~~Lle~-lGLeld~~G~--------------I~VD~~~~~-TSvPgVFAAGD~a~--------g 1382 (1429)
|.||.|+|..+|...++.. +. .++..+. .+|.. ... +-+|++|++|-... +
T Consensus 226 ~~~~~VV~ATG~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~e~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~r~g 303 (326)
T 2gjc_A 226 QKHGVILSTTGHDGPFGAFCAKRIV-DIDQNQKLGGMKGLDMNHAEHDVVIH-SGAYAGVDNMYFAGMEVAELDGLNRMG 303 (326)
T ss_dssp TTCCEEEECCCCC--CCSHHHHHHH-HHHSSCCCCCCCCBCHHHHHHHHHHH-CEECTTSTTEEECTHHHHHHHTCCBCC
T ss_pred ccCCEEEECcCCCchHHHHHHhhcc-ccccccccCceeccccccchhheeec-CCCccccCCEEECChHHHHhcCCCCCC
Confidence 9999999988666544322 21 1111110 11222 222 26799999996541 2
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHh
Q psy12805 1383 QSLVVWAISEGRQAAREIDSFLM 1405 (1429)
Q Consensus 1383 ~~lvv~Ai~qGr~AA~nI~~~L~ 1405 (1429)
|-+ ---.-.|++||..|...|.
T Consensus 304 ~~f-g~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 304 PTF-GAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp SCC-HHHHHHHHHHHHHHHHHHH
T ss_pred hhh-hhhhhhhHHHHHHHHHHhh
Confidence 222 2234569999999987763
No 324
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=73.05 E-value=7.7 Score=47.34 Aligned_cols=95 Identities=13% Similarity=0.226 Sum_probs=60.9
Q ss_pred CceEEEccccccccHHHHHHhCCCCcc------cc--------ccc-----------------------cch-hhccchH
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLG------NI--------IPK-----------------------WND-LIYHNNW 1283 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~------~i--------Lp~-----------------------~d~-lvf~~e~ 1283 (1429)
-+++|||||..|+.++..+...|.++. .+ .|. |.. .....++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 369999999999999999988777661 00 110 100 1122356
Q ss_pred HHHHHHHHHhCC----CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEecccc
Q psy12805 1284 SEALNQLLQTNN----FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1284 ~~al~~~Le~~G----~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~ 1339 (1429)
.+++....++.+ +.++.++..+++.. +++.|.....+| +++.||.||+|+|..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~-~~~~w~V~~~~G--~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDE-ATNTWTVDTNHG--DRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEET-TTTEEEEEETTC--CEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcC-CCCeEEEEECCC--CEEEeCEEEECcCCC
Confidence 666666666544 55678888887742 234565443333 369999999999963
No 325
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=72.78 E-value=7 Score=42.97 Aligned_cols=104 Identities=17% Similarity=0.112 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
+.+.++.+|+. +..+.|=+.+..-+..+.. + ..++|.|.+=..+.|.|. +.+.-..+.-+.++.+.+.++
T Consensus 95 ~~~~i~~i~~~--G~k~gv~lnp~tp~~~~~~-~-l~~~D~VlvmsV~pGfgg------Q~f~~~~l~kI~~lr~~~~~~ 164 (231)
T 3ctl_A 95 AFRLIDEIRRH--DMKVGLILNPETPVEAMKY-Y-IHKADKITVMTVDPGFAG------QPFIPEMLDKLAELKAWRERE 164 (231)
T ss_dssp HHHHHHHHHHT--TCEEEEEECTTCCGGGGTT-T-GGGCSEEEEESSCTTCSS------CCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc--CCeEEEEEECCCcHHHHHH-H-HhcCCEEEEeeeccCcCC------ccccHHHHHHHHHHHHHHhcc
Confidence 44566666665 5677777765443322211 1 237999976544433321 123233344556666665555
Q ss_pred CCCCceEEEEcCCcccHHHHHHHHHhcchhhhcc-hhH
Q psy12805 590 NLRSRVVLQADGQIRTGFDVVVAALLGADEIGLS-TAP 626 (1429)
Q Consensus 590 gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~g-t~~ 626 (1429)
|+ .+.|.++|||. ...+..++..|||.+-+| ++.
T Consensus 165 ~~--~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~sai 199 (231)
T 3ctl_A 165 GL--EYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGL 199 (231)
T ss_dssp TC--CCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTT
T ss_pred CC--CceEEEECCcC-HHHHHHHHHcCCCEEEEccHHH
Confidence 54 47899999998 566788899999999999 643
No 326
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=72.50 E-value=8.6 Score=47.52 Aligned_cols=105 Identities=10% Similarity=0.031 Sum_probs=65.1
Q ss_pred CceEEEccccccccHHHHHHhCCCCcccc----cc-----------------------------------c-cch-----
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLGNI----IP-----------------------------------K-WND----- 1276 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~~i----Lp-----------------------------------~-~d~----- 1276 (1429)
-+++|||||..|+-+|..++..|.+|..+ .+ . |..
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 36999999999999999999888776000 00 0 100
Q ss_pred --------------hhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEe-CCCeeEEEecEEEEecccc
Q psy12805 1277 --------------LIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEV-PNSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1277 --------------lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~-~gse~~ieaDlVLlAiG~~ 1339 (1429)
.+....+.+.+.+.+++.| +..+.+++.++. +++ .+..... .++.+++.+|+||.|.|..
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~--~~~-~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQ--DAE-AVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCB--CSS-CEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cCC-eEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 0122346677777776666 677888888854 223 3333322 3332689999999999976
Q ss_pred CchhhhhhccCcc
Q psy12805 1340 GPERYIANELDLT 1352 (1429)
Q Consensus 1340 pp~~~Lle~lGLe 1352 (1429)
. .+-+.+|++
T Consensus 207 S---~vR~~lGi~ 216 (570)
T 3fmw_A 207 S---TVRRLAADR 216 (570)
T ss_dssp C---HHHHHTTCC
T ss_pred c---hHHHHcCCC
Confidence 2 333444544
No 327
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=72.43 E-value=2.4 Score=50.37 Aligned_cols=95 Identities=9% Similarity=0.083 Sum_probs=54.5
Q ss_pred CceEEEccccccccHHHHHHhC--CCCcccc----ccccch----hhccc------hHHHHHHHHHHhCC--CCCCcEEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSH--GCPLGNI----IPKWND----LIYHN------NWSEALNQLLQTNN--FPAGIKTV 1303 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~--Gc~V~~i----Lp~~d~----lvf~~------e~~~al~~~Le~~G--~~~gv~v~ 1303 (1429)
.+++|||||..|+..+..+++. |.+|..+ -+.+.. ....+ ++.....+.+++.+ +..+.++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 4799999999999999988876 7776111 000100 00001 11111234445555 34566666
Q ss_pred EEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1304 KVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1304 ~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+.. .+..+... ..++.+++.+|.+++|+|.+|
T Consensus 83 ~id~---~~~~v~v~-~~~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 83 AMDV---ENQLIAWT-RKEEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp EEET---TTTEEEEE-ETTEEEEEECSEEEECCCCCB
T ss_pred EEEC---CCCEEEEE-ecCceEEEEcCEEEECCCccc
Confidence 6643 23333332 344566899999999999984
No 328
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=72.01 E-value=8.9 Score=42.33 Aligned_cols=81 Identities=19% Similarity=0.153 Sum_probs=53.2
Q ss_pred HHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcC
Q psy12805 511 AELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNN 590 (1429)
Q Consensus 511 ~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~g 590 (1429)
.+.|+.+++..|..-|..-. +=....+..+.++|||+|+.-+. . .++.+...+.
T Consensus 73 ~e~I~~l~~~~~~~~iGaGT---Vlt~~~a~~Ai~AGA~fIvsP~~-----------------~-----~~vi~~~~~~- 126 (232)
T 4e38_A 73 VEAIRLLRQAQPEMLIGAGT---ILNGEQALAAKEAGATFVVSPGF-----------------N-----PNTVRACQEI- 126 (232)
T ss_dssp HHHHHHHHHHCTTCEEEEEC---CCSHHHHHHHHHHTCSEEECSSC-----------------C-----HHHHHHHHHH-
T ss_pred HHHHHHHHHhCCCCEEeECC---cCCHHHHHHHHHcCCCEEEeCCC-----------------C-----HHHHHHHHHc-
Confidence 46777888877765555442 22345678899999999983221 1 1122222233
Q ss_pred CCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 591 LRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 591 LR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
.++++. |+.|+.++..|+.+|||.+.+
T Consensus 127 ---gi~~ip--Gv~TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 127 ---GIDIVP--GVNNPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp ---TCEEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred ---CCCEEc--CCCCHHHHHHHHHcCCCEEEE
Confidence 356665 688999999999999998864
No 329
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=71.45 E-value=4.1 Score=51.31 Aligned_cols=47 Identities=19% Similarity=0.113 Sum_probs=39.1
Q ss_pred CCcc-CCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy12805 1365 TYLT-TVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFLMGTSTLPD 1412 (1429)
Q Consensus 1365 ~~~T-SvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g~~~~p~ 1412 (1429)
+++| .+||+|+||++.+.. --.+|.++|..|+.|+.+++.+++....
T Consensus 372 tle~k~~~gLf~AGqi~g~~-Gy~eA~a~G~~AG~naa~~~~~~~~~~~ 419 (641)
T 3cp8_A 372 TMETRPVENLFFAGQINGTS-GYEEAAAQGLMAGINAVRKILGKELIVL 419 (641)
T ss_dssp TSBBSSSBTEEECSGGGTBC-CHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred cccccCcCCEEEEEeecCCc-cHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 6787 599999999998754 3449999999999999999999876543
No 330
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=71.30 E-value=7 Score=48.62 Aligned_cols=57 Identities=14% Similarity=0.133 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEe-CCCeeEEEecEEEEeccccC
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEV-PNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~-~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+.+.+.+.+++.| +.++.+++.++.. .+..+..... +|+..++.||.||.|.|...
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~--~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLS--DPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECC--STTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 45666777777777 5568888888542 1223333332 44446899999999999873
No 331
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=71.24 E-value=2.1 Score=52.94 Aligned_cols=78 Identities=15% Similarity=0.098 Sum_probs=50.4
Q ss_pred hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCC-ChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHH------
Q psy12805 536 VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGL-PWELGVAETHQVLALNNLRSRVVLQADGQIRTGFD------ 608 (1429)
Q Consensus 536 vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~Gi-P~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~D------ 608 (1429)
...+|....++|||.|.+.+-++.... + ..- +....+.++.+ ...++|++.||||+..|
T Consensus 282 p~~~A~~~~~~Ga~~l~~~dl~~~~~~-~------~~~~~~~~~i~~i~~-------~~~ipi~vgGGIr~~~d~~~~~~ 347 (555)
T 1jvn_A 282 PVQLAQKYYQQGADEVTFLNITSFRDC-P------LKDTPMLEVLKQAAK-------TVFVPLTVGGGIKDIVDVDGTKI 347 (555)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEC---CC-C------GGGCHHHHHHHHHTT-------TCCSCEEEESSCSCEECTTCCEE
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccc-c------CCCchHHHHHHHHHh-------hCCCcEEEeCccccchhcccccc
Confidence 344778888899998887776543110 0 011 11222222211 13689999999999844
Q ss_pred -----HHHHHHhcchhhhcchhHH
Q psy12805 609 -----VVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 609 -----v~kAlaLGAdavg~gt~~L 627 (1429)
+...+.+|||.|-++|..+
T Consensus 348 ~~~~~a~~~l~aGad~V~igt~~~ 371 (555)
T 1jvn_A 348 PALEVASLYFRSGADKVSIGTDAV 371 (555)
T ss_dssp CHHHHHHHHHHHTCSEEEECHHHH
T ss_pred hHHHHHHHHHHcCCCEEEECCHHh
Confidence 8888999999999999664
No 332
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=70.78 E-value=7 Score=44.64 Aligned_cols=54 Identities=17% Similarity=0.123 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceE-EEE-eCCCeeEEEecEEEEecccc
Q psy12805 1283 WSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWK-MDE-VPNSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1283 ~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~-~v~-~~gse~~ieaDlVLlAiG~~ 1339 (1429)
+.+.+.+.+++.| +..+.+++.++.. ++.+. ... ..++..++++|.||.|.|..
T Consensus 104 l~~~L~~~~~~~gv~i~~~~~v~~i~~~---~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 104 FDKHLAALAAKAGADVWVKSPALGVIKE---NGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEE---TTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEe---CCEEEEEEEEECCeEEEEEcCEEEECCCcc
Confidence 4466666666666 5567888888653 44443 222 23456689999999999976
No 333
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=70.44 E-value=11 Score=44.60 Aligned_cols=96 Identities=14% Similarity=0.069 Sum_probs=60.6
Q ss_pred CceEEEccccccccHHHHHHhCCCCc-----ccc----------------cccc---c-----------h----------
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPL-----GNI----------------IPKW---N-----------D---------- 1276 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V-----~~i----------------Lp~~---d-----------~---------- 1276 (1429)
-+++|||||..|+-+|.++++.|.+| ... +..+ + .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 46999999999999999998777766 000 0000 0 0
Q ss_pred ---------hhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceE-EEEe---CCCeeEEEecEEEEeccccC
Q psy12805 1277 ---------LIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWK-MDEV---PNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1277 ---------lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~-~v~~---~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+...++.+.+.+.+.+.| +.++.+++.+... ++.+. .... +|+..++.+|.||.|.|...
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~---~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFE---DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE---TTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEE---CCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 0111246666766666666 5668888888652 34432 2222 44445899999999999763
No 334
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=70.28 E-value=9.8 Score=46.12 Aligned_cols=57 Identities=9% Similarity=0.023 Sum_probs=37.9
Q ss_pred chHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCC---ceEEEEeC-CCeeEEEecEEEEecccc
Q psy12805 1281 NNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATG---RWKMDEVP-NSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G---~~~~v~~~-gse~~ieaDlVLlAiG~~ 1339 (1429)
..+...+.+.+++.| +.++.+++.++.. +++ .+.....+ ++..++.||.||.|.|..
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~--~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~ 182 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQH--DDDAGAGVTARLAGPDGEYDLRAGYLVGADGNR 182 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE--CGGGCSEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEC--CCCccccEEEEEEcCCCeEEEEeCEEEECCCCc
Confidence 356677777777766 5678888888764 221 33333322 224689999999999986
No 335
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=70.18 E-value=2.6 Score=49.34 Aligned_cols=94 Identities=11% Similarity=0.092 Sum_probs=55.7
Q ss_pred CCCceEEEccccccccHHHHHHhCCCCc-----cccccccch----hhc----cchHHHHHHHHHHhCC--CCCCcEEEE
Q psy12805 1240 VRKGLRIQAARCMECGVPFCQSSHGCPL-----GNIIPKWND----LIY----HNNWSEALNQLLQTNN--FPAGIKTVK 1304 (1429)
Q Consensus 1240 ~pk~lvVIGaGcIgcE~a~c~s~~Gc~V-----~~iLp~~d~----lvf----~~e~~~al~~~Le~~G--~~~gv~v~~ 1304 (1429)
...+++|||||.-|+..+..+...+.+| ...+|.+.. .+. ..++.....+.+++.+ +..+.++..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 4568999999999999888886666666 222222111 010 0122222334455566 445777777
Q ss_pred EEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1305 VEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1305 Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
+.. +.+ . +...+ .+++.+|.||+|+|.+|
T Consensus 88 id~----~~~-~-v~~~~-g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 88 IDP----NNK-L-VTLKS-GEKIKYEKLIIASGSIA 116 (385)
T ss_dssp EET----TTT-E-EEETT-SCEEECSEEEECCCEEE
T ss_pred EEC----CCC-E-EEECC-CCEEECCEEEEecCCCc
Confidence 743 222 1 23333 34799999999999874
No 336
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=69.89 E-value=4 Score=50.26 Aligned_cols=98 Identities=11% Similarity=0.074 Sum_probs=58.0
Q ss_pred CCCceEEEccccccccHHHHHHhC--CCCcc-----cc-------ccccch-hhc--cchHHHHHHHHHHhCC--CCCCc
Q psy12805 1240 VRKGLRIQAARCMECGVPFCQSSH--GCPLG-----NI-------IPKWND-LIY--HNNWSEALNQLLQTNN--FPAGI 1300 (1429)
Q Consensus 1240 ~pk~lvVIGaGcIgcE~a~c~s~~--Gc~V~-----~i-------Lp~~d~-lvf--~~e~~~al~~~Le~~G--~~~gv 1300 (1429)
..++++|||||..|+..+..+++. |.+|. .. +|.+.. ... ...+...+....+..+ +..+.
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 457899999999999999988876 66661 11 111100 000 0112334445555556 34566
Q ss_pred EEEEEEEeecCCCceEEEEe-CCCeeEEEecEEEEeccccC
Q psy12805 1301 KTVKVEWTKDATGRWKMDEV-PNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1301 ~v~~Ve~~k~~~G~~~~v~~-~gse~~ieaDlVLlAiG~~p 1340 (1429)
++..+.. .+..+..... .++...+.+|.|++|+|.+|
T Consensus 115 ~V~~id~---~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 115 EVVKINK---EEKTITIKNVTTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp EEEEEET---TTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred EEEEEEC---CCCEEEEeecCCCCEEEEeCCEEEECCCCCC
Confidence 6666643 2333333322 34445789999999999874
No 337
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=69.82 E-value=21 Score=40.89 Aligned_cols=89 Identities=13% Similarity=0.103 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEecc-ccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVS-EVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQ 584 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~-e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q 584 (1429)
+++.+.+.|..+|+.. +.|+.|.+.. .......+..+.++|+|+|.+.+. .|.. ..+
T Consensus 61 ~~~~l~~~i~~i~~~~-~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g----------------~p~~-----~~~ 118 (326)
T 3bo9_A 61 KPDDLRKAISELRQKT-DKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAG----------------NPTK-----YIR 118 (326)
T ss_dssp CHHHHHHHHHHHHTTC-SSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESS----------------CCHH-----HHH
T ss_pred CHHHHHHHHHHHHHhc-CCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCC----------------CcHH-----HHH
Confidence 5688889999999875 6799998764 334556667788999999998432 2321 223
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
.+...+ +.++. .+.+..++.++...|||.+.+
T Consensus 119 ~l~~~g----~~v~~--~v~s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 119 ELKENG----TKVIP--VVASDSLARMVERAGADAVIA 150 (326)
T ss_dssp HHHHTT----CEEEE--EESSHHHHHHHHHTTCSCEEE
T ss_pred HHHHcC----CcEEE--EcCCHHHHHHHHHcCCCEEEE
Confidence 344443 44553 568889998999999998865
No 338
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=69.18 E-value=7 Score=47.28 Aligned_cols=56 Identities=11% Similarity=0.101 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceE-EE--EeCCCeeEEEecEEEEeccccC
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWK-MD--EVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~-~v--~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+.+.+.+.+++.| +.++.+++.++.. ++.+. .. ..+|+.+++.+|+||.|.|...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~---~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFE---GERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEE---TTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEE---CCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 45566666666666 5678888888653 34332 11 2234446899999999999863
No 339
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=69.17 E-value=21 Score=40.80 Aligned_cols=89 Identities=18% Similarity=0.141 Sum_probs=62.7
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccc-----cChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSE-----VGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVA 580 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e-----~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ 580 (1429)
+++++.+.+..+|+.. +.|+.|-+... ......+..+.++|+|+|.+... .|.
T Consensus 51 s~~~l~~~i~~i~~~~-~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g----------------~p~----- 108 (328)
T 2gjl_A 51 SPEALAAEIARCRELT-DRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGN----------------DPG----- 108 (328)
T ss_dssp SHHHHHHHHHHHHHHC-SSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEES----------------CCH-----
T ss_pred CHHHHHHHHHHHHHhc-CCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCC----------------CcH-----
Confidence 4688888899998875 56887776654 35556677788999999997642 242
Q ss_pred HHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 581 ETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 581 ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
+..+.+.+.| ++++. .+.|..++.++...|||.+.+
T Consensus 109 ~~~~~l~~~g----i~vi~--~v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 109 EHIAEFRRHG----VKVIH--KCTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp HHHHHHHHTT----CEEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcC----CCEEe--eCCCHHHHHHHHHcCCCEEEE
Confidence 2223444443 45553 368889999999999998865
No 340
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=68.46 E-value=8.3 Score=43.92 Aligned_cols=26 Identities=0% Similarity=-0.001 Sum_probs=23.0
Q ss_pred CceEEEccccccccHHHHHHhCCCCc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
.+++|||||..|+-.|+.+++.|.+|
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V 43 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNT 43 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcE
Confidence 46999999999999999998878777
No 341
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=67.79 E-value=2.5 Score=52.04 Aligned_cols=53 Identities=13% Similarity=0.210 Sum_probs=38.7
Q ss_pred CccccCCCCEEecCCCCccCCCCEEEeCCCCCCC--------CcHHHHHHHHHHHHHHHHHHHh
Q psy12805 1350 DLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQ--------SLVVWAISEGRQAAREIDSFLM 1405 (1429)
Q Consensus 1350 GLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~--------~lvv~Ai~qGr~AA~nI~~~L~ 1405 (1429)
||.+|.++.+. |. -.|.+||+||+|+++.+. ..+..|+--||.|++++.++..
T Consensus 504 Gl~vd~~~~vl-~~--~g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~~ 564 (566)
T 1qo8_A 504 GVAINTTASVL-DL--QSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHAL 564 (566)
T ss_dssp EECBCTTCEEE-BT--TSCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cEEECCCCeEE-CC--CCCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Confidence 56667666543 32 247899999999997532 2456788889999999988764
No 342
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=67.67 E-value=3.2 Score=44.78 Aligned_cols=66 Identities=11% Similarity=-0.052 Sum_probs=45.4
Q ss_pred HHHHHHHhcCCcEEEEecCCCCCCcccccccccc-CCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc
Q psy12805 538 VVASGVAKGKAEHIVISGHDGGTGASSWTGIKNA-GLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG 616 (1429)
Q Consensus 538 ~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~-GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG 616 (1429)
+.+..+.++|+|+|.+ +... .. |+. .|.++...+ .++++++.|||. ..++...+.+|
T Consensus 115 ~e~~~A~~~Gad~v~~--fpa~----------~~gG~~---~lk~l~~~~------~~ipvvaiGGI~-~~n~~~~l~aG 172 (207)
T 2yw3_A 115 TEVERALALGLSALKF--FPAE----------PFQGVR---VLRAYAEVF------PEVRFLPTGGIK-EEHLPHYAALP 172 (207)
T ss_dssp HHHHHHHHTTCCEEEE--TTTT----------TTTHHH---HHHHHHHHC------TTCEEEEBSSCC-GGGHHHHHTCS
T ss_pred HHHHHHHHCCCCEEEE--ecCc----------cccCHH---HHHHHHhhC------CCCcEEEeCCCC-HHHHHHHHhCC
Confidence 3456678899999998 2210 12 222 233333222 258999999997 68999999999
Q ss_pred chhhhcchh
Q psy12805 617 ADEIGLSTA 625 (1429)
Q Consensus 617 Adavg~gt~ 625 (1429)
|+.+++++.
T Consensus 173 a~~vavgSa 181 (207)
T 2yw3_A 173 NLLAVGGSW 181 (207)
T ss_dssp SBSCEEESG
T ss_pred CcEEEEehh
Confidence 999998884
No 343
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=67.28 E-value=2.8 Score=49.55 Aligned_cols=93 Identities=9% Similarity=0.079 Sum_probs=53.9
Q ss_pred CceEEEccccccccHHHHHHh---CCCCcccc--------ccccchhh----ccchHHHHHHHHHHhCCCCC-CcEEEEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSS---HGCPLGNI--------IPKWNDLI----YHNNWSEALNQLLQTNNFPA-GIKTVKV 1305 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~---~Gc~V~~i--------Lp~~d~lv----f~~e~~~al~~~Le~~G~~~-gv~v~~V 1305 (1429)
++++|||||..|+..+..+++ .|.+|..+ .|.+.... ...++...+.+.++..++.. ..+++.+
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i 84 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQI 84 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEEEE
Confidence 579999999999999999887 67777211 11111100 01123333455666666321 2344555
Q ss_pred EEeecCCCceEEEEeCCCeeEEEecEEEEeccccCc
Q psy12805 1306 EWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGP 1341 (1429)
Q Consensus 1306 e~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp 1341 (1429)
.. +.. . +..++. +++.+|.||+|+|.+|.
T Consensus 85 d~----~~~-~-V~~~~g-~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 85 DA----EAQ-N-ITLADG-NTVHYDYLMIATGPKLA 113 (437)
T ss_dssp ET----TTT-E-EEETTS-CEEECSEEEECCCCEEC
T ss_pred Ec----CCC-E-EEECCC-CEEECCEEEECCCCCcC
Confidence 32 222 1 233333 47999999999999843
No 344
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=66.95 E-value=7.1 Score=46.44 Aligned_cols=122 Identities=13% Similarity=0.101 Sum_probs=63.3
Q ss_pred CCcccccchHHHHhccCCCCc---------cccccCCCCCCCCCHHHHHHHHHHHHH--hCCC--------CeEEEEecc
Q psy12805 472 GELPGYKVTKDIASTRHSVPG---------VGLISPPPHHDIYSIEDLAELIYDLKC--ANPN--------ARISVKLVS 532 (1429)
Q Consensus 472 G~lpg~KV~~~iA~~r~~~pg---------~~LisP~~h~di~siedL~qlI~~Lk~--~~~~--------~pV~VKLv~ 532 (1429)
+.++...+.++|.++|..+.+ ++|+ |++ + +.++ ++++++ .+|. ..|.+-+..
T Consensus 73 ~~~~~e~~~~~i~~vk~~~~g~~~~P~~~~~nL~-~~~---~-~~~~----~~~~~~~~~~p~~~~d~~g~l~v~~~v~~ 143 (400)
T 3ffs_A 73 KNMDMESQVNEVLKVKNWISNLEKNESTPDQNLD-KES---T-DGKD----TKSNNNIDAYSNENLDNKGRLRVGAAIGV 143 (400)
T ss_dssp SSSCHHHHHHHHHHHHCCC----------------------------------------CCTTCCBCTTSSBCCEEEECC
T ss_pred CCCCHHHHHHHHHHHHhhccCcccCCCCcccccc-CCC---C-CHHH----HHHHHHhhhCcchhhccccceeEEeecCC
Confidence 366778888899888877653 5666 321 1 2222 223321 1221 233332221
Q ss_pred ccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHH
Q psy12805 533 EVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVA 612 (1429)
Q Consensus 533 e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kA 612 (1429)
. . ...+..+.++|+|+|+|+-..| .|. .+.+..+.+.+. + .++|++ |.+.|..++..+
T Consensus 144 ~-~-~e~~~~lveaGvdvIvldta~G--------------~~~--~~~e~I~~ik~~-~--~i~Vi~-g~V~t~e~A~~a 201 (400)
T 3ffs_A 144 N-E-IERAKLLVEAGVDVIVLDSAHG--------------HSL--NIIRTLKEIKSK-M--NIDVIV-GNVVTEEATKEL 201 (400)
T ss_dssp C---CHHHHHHHHHTCSEEEECCSCC--------------SBH--HHHHHHHHHHTT-C--CCEEEE-EEECSHHHHHHH
T ss_pred C-H-HHHHHHHHHcCCCEEEEeCCCC--------------Ccc--cHHHHHHHHHhc-C--CCeEEE-eecCCHHHHHHH
Confidence 1 2 3456778999999999864432 232 122222333322 1 366665 788999999999
Q ss_pred HHhcchhhhcch
Q psy12805 613 ALLGADEIGLST 624 (1429)
Q Consensus 613 laLGAdavg~gt 624 (1429)
+.+|||++-+|.
T Consensus 202 ~~aGAD~I~vG~ 213 (400)
T 3ffs_A 202 IENGADGIKVGI 213 (400)
T ss_dssp HHTTCSEEEECC
T ss_pred HHcCCCEEEEeC
Confidence 999999997753
No 345
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=66.65 E-value=20 Score=40.01 Aligned_cols=107 Identities=17% Similarity=0.068 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
|+..++...+++. +..++.=+.+......+ +.+++.+-.+|-+-..-|-||... +....+.+..+.++
T Consensus 128 eE~~~~~~~~~~~--Gl~~I~lvaP~t~~eRi-~~ia~~a~gFiY~Vs~~GvTG~~~---------~~~~~~~~~v~~vr 195 (252)
T 3tha_A 128 EESDDLIKECERY--NIALITLVSVTTPKERV-KKLVKHAKGFIYLLASIGITGTKS---------VEEAILQDKVKEIR 195 (252)
T ss_dssp GGCHHHHHHHHHT--TCEECEEEETTSCHHHH-HHHHTTCCSCEEEECCSCSSSCSH---------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc--CCeEEEEeCCCCcHHHH-HHHHHhCCCeEEEEecCCCCCccc---------CCCHHHHHHHHHHH
Confidence 4444555555554 33333333333333333 445566556665544556566431 11122333334443
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHHHh
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLITM 630 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~al 630 (1429)
+. .++++++.+||+|+.++.++.. +||.|=+|++..-.+
T Consensus 196 ~~---~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk~i 234 (252)
T 3tha_A 196 SF---TNLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVKCF 234 (252)
T ss_dssp TT---CCSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHHHT
T ss_pred Hh---cCCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHHHH
Confidence 33 3689999999999999977655 699999999776654
No 346
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=65.97 E-value=5.2 Score=47.74 Aligned_cols=97 Identities=10% Similarity=0.097 Sum_probs=48.1
Q ss_pred CCceEEEccccccccHHHHHHhC--CCCcc-----cc-------ccccchh-h-ccchH-------HHHHHHHHHhCC--
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSH--GCPLG-----NI-------IPKWNDL-I-YHNNW-------SEALNQLLQTNN-- 1295 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~--Gc~V~-----~i-------Lp~~d~l-v-f~~e~-------~~al~~~Le~~G-- 1295 (1429)
+++++|||||..|+..+..+++. |.+|. .. +|.+..- . ...++ ........+..+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 46799999999999999998877 77771 11 2211100 0 00011 111222222233
Q ss_pred CCCCcEEEEEEEeecCCCceEEEEe-CCCeeEEEecEEEEeccccC
Q psy12805 1296 FPAGIKTVKVEWTKDATGRWKMDEV-PNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1296 ~~~gv~v~~Ve~~k~~~G~~~~v~~-~gse~~ieaDlVLlAiG~~p 1340 (1429)
+..+.++..+.. .+..+..... +++.+.+.+|.+++|+|.+|
T Consensus 83 ~~~~~~V~~id~---~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 125 (472)
T 3iwa_A 83 ALVETRAHAIDR---AAHTVEIENLRTGERRTLKYDKLVLALGSKA 125 (472)
T ss_dssp EECSEEEEEEET---TTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred EEECCEEEEEEC---CCCEEEEeecCCCCEEEEECCEEEEeCCCCc
Confidence 234555555533 2333332221 25556899999999999874
No 347
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=65.72 E-value=5.6 Score=48.08 Aligned_cols=68 Identities=21% Similarity=0.139 Sum_probs=45.9
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc
Q psy12805 537 GVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG 616 (1429)
Q Consensus 537 g~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG 616 (1429)
-..+..+.++|+|.|++++..|. .. .+...+.++.+.+ ..++++ .|++.+..++..++.+|
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a~g~-----------~~-~~~~~i~~l~~~~------p~~pvi-~G~v~t~~~a~~~~~~G 295 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTAHGH-----------SA-GVLRKIAEIRAHF------PNRTLI-AGNIATAEGARALYDAG 295 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCSCTT-----------CH-HHHHHHHHHHHHC------SSSCEE-EEEECSHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCeEEEeeecCc-----------ch-hHHHHHHHHHHHC------CCCcEe-CCCccCHHHHHHHHHcC
Confidence 35567788999999999985332 11 1222223332221 146677 89999999999999999
Q ss_pred chhhhcc
Q psy12805 617 ADEIGLS 623 (1429)
Q Consensus 617 Adavg~g 623 (1429)
|+.+-+|
T Consensus 296 ad~I~vg 302 (491)
T 1zfj_A 296 VDVVKVG 302 (491)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9998665
No 348
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=65.61 E-value=15 Score=39.49 Aligned_cols=101 Identities=10% Similarity=-0.001 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEec-cccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCC-hHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLV-SEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLP-WELGVAETHQV 585 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv-~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP-~~laL~ev~q~ 585 (1429)
+.+...++.+++. +.++.+++. +-. .+.+..+.+.|.+.+++.=. .. ....|.. ...-+.++.+.
T Consensus 93 ~~l~~~~~~~~~~--g~~~~~~ll~~~t--~~~~~~l~~~~~~~~vl~~a--~~-------~~~~G~~g~~~~i~~lr~~ 159 (216)
T 1q6o_A 93 NTAKGALDVAKEF--NGDVQIELTGYWT--WEQAQQWRDAGIGQVVYHRS--RD-------AQAAGVAWGEADITAIKRL 159 (216)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEECSCCC--HHHHHHHHHTTCCEEEEECC--HH-------HHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc--CCCceeeeeeCCC--hhhHHHHHhcCcHHHHHHHH--HH-------HHhcCCCCCHHHHHHHHHh
Confidence 3466777777764 567777766 322 44455566668776666210 00 0011211 12334444444
Q ss_pred HHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 586 LALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 586 L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
+ + ..++|+++|||+ ...+..++..|||.+-+|++.+
T Consensus 160 ~---~--~~~~i~v~GGI~-~~~~~~~~~aGad~ivvG~~I~ 195 (216)
T 1q6o_A 160 S---D--MGFKVTVTGGLA-LEDLPLFKGIPIHVFIAGRSIR 195 (216)
T ss_dssp H---H--TTCEEEEESSCC-GGGGGGGTTSCCSEEEESHHHH
T ss_pred c---C--CCCcEEEECCcC-hhhHHHHHHcCCCEEEEeehhc
Confidence 3 1 147899999998 6667788889999998888644
No 349
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=65.55 E-value=4 Score=49.88 Aligned_cols=51 Identities=18% Similarity=0.200 Sum_probs=41.2
Q ss_pred hhccCCCCcceEEEEEcCCe-EEEecccCCCCCCcEEEEeCCE-----------------EEEEeecccc
Q psy12805 113 ACAMEPWDGPALLTFTDGRY-IGAILDRNGLRPSRFYVLKDNV-----------------MVMASEVGVY 164 (1429)
Q Consensus 113 ~~~~epwdgpa~~~~~dg~~-~ga~ldrnglrp~r~~~~~d~~-----------------~~~~se~g~~ 164 (1429)
...++-.+|+-++++-|.+. +-+.-||.|.||. ||-..++. +++|||.-.+
T Consensus 94 ~~~l~~l~G~fa~~i~d~~~~l~~aRD~~G~rPL-~y~~~~~~~~t~~l~l~~~~~~~~~~~faSE~~al 162 (503)
T 1q15_A 94 ANALALAEGDFCFFIDEPNGELTVITESRGFSPV-HVVQGKKAWMTNSLKLVTAAEGEGALWFEEEALVC 162 (503)
T ss_dssp GGGGGGCCSSEEEEEECTTSCEEEEECSSSSSCC-EEEESSSEEEESCHHHHHHHHCTTSSCBCCHHHHT
T ss_pred HHHHHHcCEEEEEEEEeCCCCEEEEECCCCCeeE-EEEEeCCceecccccccccccCCcceEEecchHHH
Confidence 35778889999999988654 8888999999999 66666777 8888886543
No 350
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=65.23 E-value=8.4 Score=42.60 Aligned_cols=34 Identities=18% Similarity=-0.011 Sum_probs=30.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 594 RVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 594 ~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
.+++++-|||+|..|+.+++. |||.|-+||++.-
T Consensus 190 ~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~ 223 (234)
T 2f6u_A 190 KARLFYGGGIDSREKAREMLR-YADTIIVGNVIYE 223 (234)
T ss_dssp SSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHh
Confidence 579999999999999999888 9999999996654
No 351
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=65.03 E-value=8.7 Score=44.51 Aligned_cols=27 Identities=4% Similarity=0.065 Sum_probs=24.2
Q ss_pred CCceEEEccccccccHHHHHHhCCCCc
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
+.+++|||||..|+-+|.++++.|.+|
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v 31 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDV 31 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCE
Confidence 467999999999999999999888777
No 352
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=64.90 E-value=14 Score=43.72 Aligned_cols=68 Identities=16% Similarity=0.174 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCch--------hhhhhccCc
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPE--------RYIANELDL 1351 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~--------~~Lle~lGL 1351 (1429)
.+.+.+.+.+++.| +.++.+++.+... ++.+..+...++ +++.||.||+|+|..+.. ..+++.+|+
T Consensus 135 ~l~~~L~~~~~~~GV~i~~~~~V~~i~~~---~~~v~~V~~~~G-~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~ 210 (447)
T 2i0z_A 135 SVVDALLTRLKDLGVKIRTNTPVETIEYE---NGQTKAVILQTG-EVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGH 210 (447)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEE---TTEEEEEEETTC-CEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCEEEeCcEEEEEEec---CCcEEEEEECCC-CEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCC
Confidence 34455666666666 4567778887652 344222333333 369999999999977411 145677777
Q ss_pred cc
Q psy12805 1352 TL 1353 (1429)
Q Consensus 1352 el 1353 (1429)
++
T Consensus 211 ~~ 212 (447)
T 2i0z_A 211 TI 212 (447)
T ss_dssp CE
T ss_pred Cc
Confidence 65
No 353
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=64.49 E-value=4.6 Score=44.61 Aligned_cols=77 Identities=14% Similarity=0.076 Sum_probs=51.9
Q ss_pred ChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHH
Q psy12805 535 GVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAAL 614 (1429)
Q Consensus 535 Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla 614 (1429)
..-..|..-.+.|+|-+.+-+-++... .. .+-...+.++.+. ..++|.+.|||||-.|+-+.+.
T Consensus 32 dP~~~a~~~~~~gad~lhvvDld~a~~--------~~-~~~~~~i~~i~~~-------~~~pl~vGGGIrs~e~~~~~l~ 95 (243)
T 4gj1_A 32 NPLKKFKEYEKAGAKELHLVDLTGAKD--------PS-KRQFALIEKLAKE-------VSVNLQVGGGIRSKEEVKALLD 95 (243)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEHHHHHC--------GG-GCCHHHHHHHHHH-------CCSEEEEESSCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccc--------cc-hhHHHHHHHHHHh-------cCCCeEeccccccHHHHHHHHH
Confidence 344567778888999777655432210 00 1222233333332 2689999999999999999999
Q ss_pred hcchhhhcchhHH
Q psy12805 615 LGADEIGLSTAPL 627 (1429)
Q Consensus 615 LGAdavg~gt~~L 627 (1429)
+||+-|-++|.++
T Consensus 96 ~GadkVii~t~a~ 108 (243)
T 4gj1_A 96 CGVKRVVIGSMAI 108 (243)
T ss_dssp TTCSEEEECTTTT
T ss_pred cCCCEEEEccccc
Confidence 9999998888543
No 354
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=64.08 E-value=21 Score=39.10 Aligned_cols=101 Identities=14% Similarity=0.149 Sum_probs=61.6
Q ss_pred HHHHHH---HHHHhCCCCeEEEEeccccChHHHHHHHHhcC-CcEEEEecCCCCCCccccccccccCCChHH-HHHHHHH
Q psy12805 510 LAELIY---DLKCANPNARISVKLVSEVGVGVVASGVAKGK-AEHIVISGHDGGTGASSWTGIKNAGLPWEL-GVAETHQ 584 (1429)
Q Consensus 510 L~qlI~---~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaG-aD~I~IsG~~GGTgaap~~~~~~~GiP~~l-aL~ev~q 584 (1429)
+...++ .+|+. +..+.|=+.+..-+.. ...+.+.| +|.|.+=.-.-|.+. +.+ +|..+ -+.++.+
T Consensus 100 ~~~~i~~~~~i~~~--G~k~gvalnp~tp~~~-~~~~l~~g~~D~VlvmsV~pGf~g------q~f-~~~~l~ki~~lr~ 169 (227)
T 1tqx_A 100 TERCIQLAKEIRDN--NLWCGISIKPKTDVQK-LVPILDTNLINTVLVMTVEPGFGG------QSF-MHDMMGKVSFLRK 169 (227)
T ss_dssp HHHHHHHHHHHHTT--TCEEEEEECTTSCGGG-GHHHHTTTCCSEEEEESSCTTCSS------CCC-CGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--CCeEEEEeCCCCcHHH-HHHHhhcCCcCEEEEeeeccCCCC------ccc-chHHHHHHHHHHH
Confidence 344555 77765 5677777755433332 23455655 999977544322211 122 34332 3444443
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
.+ ..+.|.++|||. ...+..++..|||.+-+|++.+
T Consensus 170 ~~------~~~~I~VdGGI~-~~ti~~~~~aGAd~~V~GsaIf 205 (227)
T 1tqx_A 170 KY------KNLNIQVDGGLN-IETTEISASHGANIIVAGTSIF 205 (227)
T ss_dssp HC------TTCEEEEESSCC-HHHHHHHHHHTCCEEEESHHHH
T ss_pred hc------cCCeEEEECCCC-HHHHHHHHHcCCCEEEEeHHHh
Confidence 22 268899999998 6688888999999998888544
No 355
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=64.04 E-value=12 Score=40.61 Aligned_cols=77 Identities=23% Similarity=0.166 Sum_probs=56.9
Q ss_pred EeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHH
Q psy12805 529 KLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFD 608 (1429)
Q Consensus 529 KLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~D 608 (1429)
-|...+-...+...+.+.++|+|-+||..-- .++...+.++.+.|.+.++|++++|++.|..-+ .|
T Consensus 125 ~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~-------------~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~~~~-~~ 190 (215)
T 3ezx_A 125 DLGVDVLNENVVEEAAKHKGEKVLLVGSALM-------------TTSMLGQKDLMDRLNEEKLRDSVKCMFGGAPVS-DK 190 (215)
T ss_dssp ECCSSCCHHHHHHHHHHTTTSCEEEEEECSS-------------HHHHTHHHHHHHHHHHTTCGGGSEEEEESSSCC-HH
T ss_pred EcCCCCCHHHHHHHHHHcCCCEEEEEchhcc-------------cCcHHHHHHHHHHHHHcCCCCCCEEEEECCCCC-HH
Confidence 3444556777788889999999999444211 145566888889999999988899999888777 46
Q ss_pred HHHHHHhcchhhh
Q psy12805 609 VVVAALLGADEIG 621 (1429)
Q Consensus 609 v~kAlaLGAdavg 621 (1429)
.+. .+|||.++
T Consensus 191 ~a~--~iGad~~~ 201 (215)
T 3ezx_A 191 WIE--EIGADATA 201 (215)
T ss_dssp HHH--HHTCCBCC
T ss_pred HHH--HhCCeEEE
Confidence 655 45999774
No 356
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=63.88 E-value=23 Score=38.77 Aligned_cols=81 Identities=22% Similarity=0.222 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
-.+.|+.|++..|..-|..-.+ --...++.+.++||++|+.-+.+ | ..+..+++ +
T Consensus 51 a~~~I~~l~~~~p~~~IGAGTV---lt~~~a~~ai~AGA~fivsP~~~----------------~--evi~~~~~----~ 105 (217)
T 3lab_A 51 GLAAISAIKKAVPEAIVGAGTV---CTADDFQKAIDAGAQFIVSPGLT----------------P--ELIEKAKQ----V 105 (217)
T ss_dssp HHHHHHHHHHHCTTSEEEEECC---CSHHHHHHHHHHTCSEEEESSCC----------------H--HHHHHHHH----H
T ss_pred HHHHHHHHHHHCCCCeEeeccc---cCHHHHHHHHHcCCCEEEeCCCc----------------H--HHHHHHHH----c
Confidence 4467788888888876766533 23456778999999999853321 1 11223333 2
Q ss_pred CCCCce------EEEEcCCcccHHHHHHHHHhcchhhh
Q psy12805 590 NLRSRV------VLQADGQIRTGFDVVVAALLGADEIG 621 (1429)
Q Consensus 590 gLR~~V------~LiasGGIrtg~Dv~kAlaLGAdavg 621 (1429)
.+ +++. |+.|+.++..|+.+|||.+.
T Consensus 106 ----~v~~~~~~~~~P--G~~TptE~~~A~~~Gad~vK 137 (217)
T 3lab_A 106 ----KLDGQWQGVFLP--GVATASEVMIAAQAGITQLK 137 (217)
T ss_dssp ----HHHCSCCCEEEE--EECSHHHHHHHHHTTCCEEE
T ss_pred ----CCCccCCCeEeC--CCCCHHHHHHHHHcCCCEEE
Confidence 35 5665 78999999999999999884
No 357
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=63.77 E-value=21 Score=39.67 Aligned_cols=26 Identities=8% Similarity=0.038 Sum_probs=23.7
Q ss_pred CceEEEccccccccHHHHHHhCCCCc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
.+++|||||..|+-+|..+++.|.+|
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V 28 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQV 28 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcE
Confidence 46999999999999999999888887
No 358
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=63.69 E-value=4.7 Score=49.10 Aligned_cols=96 Identities=15% Similarity=0.053 Sum_probs=54.4
Q ss_pred CceEEEccccccccHHHHHHhC--CCCc-----ccc-------ccccchh-h--ccchHHHHHHHHHHhCC--CCCCcEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSH--GCPL-----GNI-------IPKWNDL-I--YHNNWSEALNQLLQTNN--FPAGIKT 1302 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~--Gc~V-----~~i-------Lp~~d~l-v--f~~e~~~al~~~Le~~G--~~~gv~v 1302 (1429)
++++|||||..|+..+..+++. +.+| ... +|.+..- . ....+........+..+ +..+.++
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 4799999999999999988876 6666 111 1111000 0 00111222233333344 3456777
Q ss_pred EEEEEeecCCCceEEEEe-CCCeeEEEecEEEEeccccC
Q psy12805 1303 VKVEWTKDATGRWKMDEV-PNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1303 ~~Ve~~k~~~G~~~~v~~-~gse~~ieaDlVLlAiG~~p 1340 (1429)
..+.. ....+..... +++..++.+|.||+|+|.+|
T Consensus 82 ~~id~---~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 82 VAIDR---AAKLVTVRRLLDGSEYQESYDTLLLSPGAAP 117 (565)
T ss_dssp EEEET---TTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred EEEEC---CCCEEEEEecCCCCeEEEECCEEEECCCCCC
Confidence 77743 2333333322 25556899999999999874
No 359
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=63.41 E-value=6.7 Score=43.59 Aligned_cols=90 Identities=13% Similarity=0.054 Sum_probs=49.8
Q ss_pred ceEEEccccccccHHHHHHhCCCCcc---------cc-----c---cccchhhccchHHHHHHHHHHhCCCC--CCcEEE
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPLG---------NI-----I---PKWNDLIYHNNWSEALNQLLQTNNFP--AGIKTV 1303 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V~---------~i-----L---p~~d~lvf~~e~~~al~~~Le~~G~~--~gv~v~ 1303 (1429)
.++|||||.-|+..|.-+++.|.+|. .+ + |.+. .+...++.........+.+.. .+....
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFE-MITGPDLSTKMFEHAKKFGAVYQYGDIKS 86 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCS-SBCHHHHHHHHHHHHHHTTCEEEECCCCE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCcc-ccchHHHHHHHHHHHhhccccccceeeee
Confidence 48999999999999888888887771 11 1 2111 122234544455555444421 111111
Q ss_pred EEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1304 KVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1304 ~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
... .... ..+. .+.+++.+|.||+|+|.+|
T Consensus 87 ~~~----~~~~-~~~~--~~~~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 87 VED----KGEY-KVIN--FGNKELTAKAVIIATGAEY 116 (312)
T ss_dssp EEE----CSSC-EEEE--CSSCEEEEEEEEECCCEEE
T ss_pred eee----eecc-eeec--cCCeEEEeceeEEcccCcc
Confidence 111 1111 1222 2344799999999999874
No 360
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=63.17 E-value=12 Score=45.45 Aligned_cols=60 Identities=13% Similarity=0.080 Sum_probs=40.4
Q ss_pred chHHHHHHHHHHhCC--CCCCcEEEEEEEeecCC-----CceEEEEe---CCCeeEEEecEEEEeccccC
Q psy12805 1281 NNWSEALNQLLQTNN--FPAGIKTVKVEWTKDAT-----GRWKMDEV---PNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1281 ~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~-----G~~~~v~~---~gse~~ieaDlVLlAiG~~p 1340 (1429)
.++.++++...+.-+ +..+.+|++|++..... +.|..... .++.+++.|+.|++|+|..|
T Consensus 145 ~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P 214 (501)
T 4b63_A 145 LEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTA 214 (501)
T ss_dssp HHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCC
Confidence 356777776665543 56788999998864321 23554432 34567899999999999774
No 361
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=62.91 E-value=3.4 Score=44.29 Aligned_cols=35 Identities=20% Similarity=0.104 Sum_probs=31.0
Q ss_pred CceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 593 SRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 593 ~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
.+++||+.|+|+|..|+.. +..||++|-.++.-|.
T Consensus 148 ~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW 182 (188)
T 1vkf_A 148 PGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILW 182 (188)
T ss_dssp TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHH
T ss_pred cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHh
Confidence 3689999999999999999 9999999987776665
No 362
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=62.73 E-value=9.4 Score=46.74 Aligned_cols=67 Identities=15% Similarity=0.124 Sum_probs=44.9
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhc
Q psy12805 537 GVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLG 616 (1429)
Q Consensus 537 g~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLG 616 (1429)
-..+..+.++|+|+|.|+...|.. ..++..+.++.+.. ..++|+ .|++.|..++..+..+|
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~------------~~v~~~i~~i~~~~------~~~~vi-~g~v~t~e~a~~~~~aG 318 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHS------------QGVIDKVKEVRAKY------PSLNII-AGNVATAEATKALIEAG 318 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTS------------HHHHHHHHHHHHHC------TTSEEE-EEEECSHHHHHHHHHHT
T ss_pred HHHHHHHHhhccceEEecccccch------------hhhhhHHHHHHHhC------CCceEE-eeeeccHHHHHHHHHhC
Confidence 345667899999999999775431 11222333333321 235565 47899999999999999
Q ss_pred chhhhc
Q psy12805 617 ADEIGL 622 (1429)
Q Consensus 617 Adavg~ 622 (1429)
||++-+
T Consensus 319 ad~i~v 324 (511)
T 3usb_A 319 ANVVKV 324 (511)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998854
No 363
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=62.50 E-value=8 Score=48.75 Aligned_cols=48 Identities=13% Similarity=0.043 Sum_probs=38.5
Q ss_pred CCcc-CCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Q psy12805 1365 TYLT-TVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFLMGTSTLPDV 1413 (1429)
Q Consensus 1365 ~~~T-SvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g~~~~p~~ 1413 (1429)
+++| .+||+|.||.+.+.. --.+|.+||..|+.|+..++.+++....+
T Consensus 378 tle~k~~~gLf~AGqinGtt-GYeEAaaqGl~AG~nAa~~~~~~~~~~~~ 426 (651)
T 3ces_A 378 TLESKFIQGLFFAGQINGTT-GYEEAAAQGLLAGLNAARLSADKEGWAPA 426 (651)
T ss_dssp TSBBSSSBTEEECSGGGTCC-CHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred cccccCCCCeEEEEEecCCc-ChHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 4666 589999999997643 44599999999999999999998665433
No 364
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=62.41 E-value=44 Score=35.18 Aligned_cols=91 Identities=13% Similarity=0.034 Sum_probs=57.3
Q ss_pred HHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcC
Q psy12805 511 AELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNN 590 (1429)
Q Consensus 511 ~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~g 590 (1429)
.+.|+.+|+.+++.||.+-+.-..+....+..+.++|+|.|++-+.. ....+.++.+.+.+.|
T Consensus 41 ~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~-----------------~~~~~~~~~~~~~~~g 103 (211)
T 3f4w_A 41 VNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVT-----------------DVLTIQSCIRAAKEAG 103 (211)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTS-----------------CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCC-----------------ChhHHHHHHHHHHHcC
Confidence 45788888887788986644333355556788999999999995431 1223455555565666
Q ss_pred CCCceEEEEc-CCcccHHH-HHHHHHhcchhhhc
Q psy12805 591 LRSRVVLQAD-GQIRTGFD-VVVAALLGADEIGL 622 (1429)
Q Consensus 591 LR~~V~Lias-GGIrtg~D-v~kAlaLGAdavg~ 622 (1429)
+ .++++ =...|..+ +..+..+|+|.+++
T Consensus 104 ~----~~~v~~~~~~t~~~~~~~~~~~g~d~i~v 133 (211)
T 3f4w_A 104 K----QVVVDMICVDDLPARVRLLEEAGADMLAV 133 (211)
T ss_dssp C----EEEEECTTCSSHHHHHHHHHHHTCCEEEE
T ss_pred C----eEEEEecCCCCHHHHHHHHHHcCCCEEEE
Confidence 4 33322 23456544 55667889887643
No 365
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=62.24 E-value=8.4 Score=48.43 Aligned_cols=47 Identities=17% Similarity=0.091 Sum_probs=38.8
Q ss_pred CCccC-CCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy12805 1365 TYLTT-VPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFLMGTSTLPD 1412 (1429)
Q Consensus 1365 ~~~TS-vPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g~~~~p~ 1412 (1429)
+++|. +||+|.||.+.+. .--.+|.+||..|+.|+.+++.+++....
T Consensus 383 tLe~k~~~gLf~AGqinGt-~GyeEAaaqGl~AG~nAa~~~~~~~~~~~ 430 (637)
T 2zxi_A 383 TLETKKIRGLFHAGNFNGT-TGYEEAAGQGIVAGINAALRAFGKEPIYL 430 (637)
T ss_dssp TSBBSSSBTEEECGGGGTB-CSHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred cccccCCCCEEEeeecCCc-chHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 57775 8999999999663 44569999999999999999999876543
No 366
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=61.89 E-value=4.2 Score=50.93 Aligned_cols=56 Identities=20% Similarity=0.216 Sum_probs=39.3
Q ss_pred CccccCCCCEEecCCCCccCCCCEEEeCCCCC---------CCCcHHHHHHHHHHHHHHHHHHHh
Q psy12805 1350 DLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRR---------GQSLVVWAISEGRQAAREIDSFLM 1405 (1429)
Q Consensus 1350 GLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~---------g~~lvv~Ai~qGr~AA~nI~~~L~ 1405 (1429)
||.+|.++.+........|++||+||||+|+. +......++--|+.|+.++..++.
T Consensus 369 Gi~~d~~~~Vl~~~~~~~t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 433 (621)
T 2h88_A 369 GIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAETCK 433 (621)
T ss_dssp BEEBCTTSEEEEEETTEEEEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred cEeECCCCeEeecccCCCcccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhh
Confidence 45666666544310123588999999999852 234567788889999999998875
No 367
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=61.23 E-value=28 Score=40.49 Aligned_cols=79 Identities=15% Similarity=0.086 Sum_probs=45.4
Q ss_pred eeEEEecEEEEeccccCchhhh----hhccCccccCCCCE----------EecCCCCccCCCCEEEeCCCCC--------
Q psy12805 1324 EKIFKCDLVLLAMGFLGPERYI----ANELDLTLDPRSNY----------STVEKTYLTTVPRVYAAGDCRR-------- 1381 (1429)
Q Consensus 1324 e~~ieaDlVLlAiG~~pp~~~L----le~lGLeld~~G~I----------~VD~~~~~TSvPgVFAAGD~a~-------- 1381 (1429)
..++.++.||.|+|...+-..+ +..+|+...-.|.- .|.. +.+ =+||+|++|=.+.
T Consensus 235 ~~~i~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~-t~~-v~~gl~~~gm~~~~~~g~~rm 312 (344)
T 3jsk_A 235 PNTINAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNN-TRE-IVPGLIVGGMELSEIDGANRM 312 (344)
T ss_dssp CEEEECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHT-CEE-EETTEEECGGGHHHHHTCEEC
T ss_pred ceEEEcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhccc-Cce-EcCCEEEechhhHhhcCCCCC
Confidence 3589999999999987653211 33344431111111 1121 112 2699999995431
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHh
Q psy12805 1382 GQSLVVWAISEGRQAAREIDSFLM 1405 (1429)
Q Consensus 1382 g~~lvv~Ai~qGr~AA~nI~~~L~ 1405 (1429)
+|-+- -=+-.|++||+.|...|.
T Consensus 313 gp~fg-~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 313 GPTFG-AMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp CSCCH-HHHHHHHHHHHHHHHHHH
T ss_pred Ccccc-eeeecCHHHHHHHHHHHH
Confidence 23222 224569999999988774
No 368
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=60.95 E-value=29 Score=39.79 Aligned_cols=89 Identities=11% Similarity=0.069 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEecc-ccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVS-EVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQ 584 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~-e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q 584 (1429)
+++.+.+.+..+|+.. +.|+.|.+.. ...+...+..+.++|+|+|.+.+.. |.. +.+
T Consensus 47 ~~~~~~~~i~~i~~~~-~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~----------------p~~-----~i~ 104 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLT-DKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGN----------------PSK-----YME 104 (332)
T ss_dssp CHHHHHHHHHHHHHHC-CSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSC----------------GGG-----THH
T ss_pred CHHHHHHHHHHHHHhc-CCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCC----------------hHH-----HHH
Confidence 5677888888998875 6799999875 4456677778889999999986521 221 122
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
.+.+.+ ++++. .+.+..++.++...|||++.+
T Consensus 105 ~l~~~g----~~v~~--~v~~~~~a~~~~~~GaD~i~v 136 (332)
T 2z6i_A 105 RFHEAG----IIVIP--VVPSVALAKRMEKIGADAVIA 136 (332)
T ss_dssp HHHHTT----CEEEE--EESSHHHHHHHHHTTCSCEEE
T ss_pred HHHHcC----CeEEE--EeCCHHHHHHHHHcCCCEEEE
Confidence 333333 45553 257788888888999998865
No 369
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=60.44 E-value=7.8 Score=45.81 Aligned_cols=94 Identities=13% Similarity=0.189 Sum_probs=54.4
Q ss_pred CCceEEEccccccccHHHHHHhCCC--Cc-----ccccccc----ch-hhcc----chHHHHHHHHHHhCC--CCCCcEE
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGC--PL-----GNIIPKW----ND-LIYH----NNWSEALNQLLQTNN--FPAGIKT 1302 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc--~V-----~~iLp~~----d~-lvf~----~e~~~al~~~Le~~G--~~~gv~v 1302 (1429)
..+++|||||..|+..+..+++.|. +| ...+|.. .. ++.. .++.....+.+++.+ +..+.++
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 3579999999999999999988887 34 1122211 00 0100 011111124455566 4456666
Q ss_pred EEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCc
Q psy12805 1303 VKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGP 1341 (1429)
Q Consensus 1303 ~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp 1341 (1429)
..+.. ++. . +.+.+. +++++|.||+|+|.+|.
T Consensus 84 ~~i~~----~~~-~-v~~~~g-~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 84 TAINR----DRQ-Q-VILSDG-RALDYDRLVLATGGRPR 115 (431)
T ss_dssp EEEET----TTT-E-EEETTS-CEEECSEEEECCCEEEC
T ss_pred EEEEC----CCC-E-EEECCC-CEEECCEEEEcCCCCcc
Confidence 66643 222 1 233332 47999999999998853
No 370
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=60.01 E-value=17 Score=38.82 Aligned_cols=32 Identities=25% Similarity=0.019 Sum_probs=26.6
Q ss_pred EEEcCCccc-HHHHHHHHHhcchhhhcchhHHH
Q psy12805 597 LQADGQIRT-GFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 597 LiasGGIrt-g~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
++++|||+. +.++.+++.+||+.+-+|++.+-
T Consensus 158 ~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~ 190 (208)
T 2czd_A 158 KILAPGIGAQGGKAKDAVKAGADYIIVGRAIYN 190 (208)
T ss_dssp EEEECCCCSSTTHHHHHHHHTCSEEEECHHHHT
T ss_pred EEEECCCCCCCCCHHHHHHcCCCEEEEChHHhc
Confidence 569999996 56899999999999988886553
No 371
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=59.84 E-value=46 Score=36.55 Aligned_cols=106 Identities=21% Similarity=0.171 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCC-CCCCccccccccccCCChHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHD-GGTGASSWTGIKNAGLPWELGVAETHQVL 586 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~-GGTgaap~~~~~~~GiP~~laL~ev~q~L 586 (1429)
.++.+++...++. +.-+.|- +|-......+...++++|-+-... -|||-+.. .++..-+.++|+.+
T Consensus 101 ~e~~~k~~~A~~~--GL~~ivc----Vge~~e~~~~~~~~~~iIayep~waiGtG~~v~-------t~~~d~~~~~~~~i 167 (226)
T 1w0m_A 101 NDLARLVAKAKSL--GLDVVVC----APDPRTSLAAAALGPHAVAVEPPELIGTGRAVS-------RYKPEAIVETVGLV 167 (226)
T ss_dssp HHHHHHHHHHHHT--TCEEEEE----ESSHHHHHHHHHTCCSEEEECCGGGTTTSCCHH-------HHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC--CCEEEEE----eCCHHHHHHHhcCCCCEEEEcChhhhccCCCCC-------CCChhHHHHHHHHH
Confidence 4578888877765 3334443 333333344566788877776543 22331100 11222256677665
Q ss_pred HhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 587 ALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 587 ~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
... ...+.|+.-|||+++.|+..+...|+|.+-+|.+.|-
T Consensus 168 r~~--~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~ 207 (226)
T 1w0m_A 168 SRH--FPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVK 207 (226)
T ss_dssp HHH--CTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHT
T ss_pred Hhc--cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHC
Confidence 443 2468999999999999999999999999999997775
No 372
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=59.37 E-value=4 Score=43.82 Aligned_cols=33 Identities=12% Similarity=-0.035 Sum_probs=29.7
Q ss_pred ceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 594 RVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 594 ~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
++++++.|||. +.++..++..||+.|+++++.+
T Consensus 144 ~iPviaiGGI~-~~nv~~~~~~Ga~gVav~s~i~ 176 (210)
T 3ceu_A 144 DSKVMALGGIN-EDNLLEIKDFGFGGAVVLGDLW 176 (210)
T ss_dssp STTEEEESSCC-TTTHHHHHHTTCSEEEESHHHH
T ss_pred CCCEEEECCCC-HHHHHHHHHhCCCEEEEhHHhH
Confidence 58999999998 8899999999999999998665
No 373
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=59.23 E-value=28 Score=42.65 Aligned_cols=26 Identities=4% Similarity=0.104 Sum_probs=23.0
Q ss_pred CceEEEccccccccHHHHHHhCCCCc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
.+++|||+|..|+..|..++..|.+|
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V 152 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKV 152 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcE
Confidence 57999999999999999888877776
No 374
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=59.14 E-value=3.7 Score=50.45 Aligned_cols=52 Identities=21% Similarity=0.364 Sum_probs=37.1
Q ss_pred CccccCCCCEEecCCCCccCCCCEEEeCCCCCC--------CCcHHHHHHHHHHHHHHHHHHH
Q psy12805 1350 DLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRG--------QSLVVWAISEGRQAAREIDSFL 1404 (1429)
Q Consensus 1350 GLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g--------~~lvv~Ai~qGr~AA~nI~~~L 1404 (1429)
||.+|.++.+. |. --|.+||+||+|.++.+ ...+..|+--||.|++++.++.
T Consensus 509 Gl~id~~~~vl-~~--~g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~ 568 (571)
T 1y0p_A 509 GVMIDTKAEVM-NA--KKQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKYS 568 (571)
T ss_dssp EEEBCTTCEEE-CT--TSCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CeEECCCceEE-CC--CCCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 56666665443 22 23789999999999653 1246678889999999998765
No 375
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=59.12 E-value=33 Score=40.69 Aligned_cols=101 Identities=12% Similarity=0.010 Sum_probs=63.4
Q ss_pred HHHHHHHHHhCCC-CeEEEEeccccChH-HHHHHHHh---cCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHH
Q psy12805 511 AELIYDLKCANPN-ARISVKLVSEVGVG-VVASGVAK---GKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQV 585 (1429)
Q Consensus 511 ~qlI~~Lk~~~~~-~pV~VKLv~e~Gvg-~vA~~~ak---aGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~ 585 (1429)
.+-++..++..|. .++.|=.-. .+.+ ..|..+++ +|+|.|.+|...-. .| .....+.++.+.
T Consensus 194 ~~A~~~~~~~~p~~~~~~vlvDT-~d~~~~~al~~~~~~~~~~d~IrlDs~~~~-----------~g-d~~~~v~~~r~~ 260 (395)
T 2i14_A 194 VKAWKYFDEVIEEEVPRIALVDT-FYDEKVEAVMAAEALGKKLFAVRLDTPSSR-----------RG-NFRKIIEEVRWE 260 (395)
T ss_dssp HHHHHHHHHHSCSSSCCEEECCS-SBCHHHHHHHHHTTTGGGCCEEEECCCTTT-----------CS-CHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCccEEEEecc-chHHHHHHHHHHHHhccCCcEEEeCCCCCC-----------cc-cHHHHHHHHHHH
Confidence 4556667777765 456554322 1221 11333333 68999999987521 01 234556778888
Q ss_pred HHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 586 LALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 586 L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
|.+.|.. ++.|++||||. ...+...... .|.+|+||...
T Consensus 261 ld~~G~~-~~~I~aSggl~-~~~i~~l~~~-vD~~gvGt~l~ 299 (395)
T 2i14_A 261 LKVRGYD-WVKIFVSGGLD-EEKIKEIVDV-VDAFGVGGAIA 299 (395)
T ss_dssp HHHTTCC-SCEEEEESSCC-HHHHHTTGGG-CSEEEECHHHH
T ss_pred HHhCCCC-ceEEEEECCCC-HHHHHHHHHh-CCEEEeCcccC
Confidence 8888874 58999999994 5555444444 99999999554
No 376
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=58.56 E-value=23 Score=38.75 Aligned_cols=81 Identities=14% Similarity=0.126 Sum_probs=51.3
Q ss_pred HHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcC
Q psy12805 511 AELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNN 590 (1429)
Q Consensus 511 ~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~g 590 (1429)
.+.|+.+++..|+.-+..-.+ -....+..+.++|||+|+ ++. + . .++.+...+.|
T Consensus 56 ~~~i~~l~~~~~~l~vgaGtv---l~~d~~~~A~~aGAd~v~-~p~---~------------d------~~v~~~ar~~g 110 (224)
T 1vhc_A 56 ADAIRLLRANRPDFLIAAGTV---LTAEQVVLAKSSGADFVV-TPG---L------------N------PKIVKLCQDLN 110 (224)
T ss_dssp HHHHHHHHHHCTTCEEEEESC---CSHHHHHHHHHHTCSEEE-CSS---C------------C------HHHHHHHHHTT
T ss_pred HHHHHHHHHhCcCcEEeeCcE---eeHHHHHHHHHCCCCEEE-ECC---C------------C------HHHHHHHHHhC
Confidence 346777887776655555432 244567778999999995 321 1 0 11112222233
Q ss_pred CCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 591 LRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 591 LR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
+.++. |+.|..++.+|..+|||.+++
T Consensus 111 ----~~~i~--Gv~t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 111 ----FPITP--GVNNPMAIEIALEMGISAVKF 136 (224)
T ss_dssp ----CCEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred ----CCEEe--ccCCHHHHHHHHHCCCCEEEE
Confidence 33333 499999999999999998876
No 377
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=58.43 E-value=23 Score=38.39 Aligned_cols=81 Identities=15% Similarity=0.124 Sum_probs=52.3
Q ss_pred HHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcC
Q psy12805 511 AELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNN 590 (1429)
Q Consensus 511 ~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~g 590 (1429)
.+.|+.+++..|..-+..-. +=....+..+.++|||+|+..+.+ .++.+.....|
T Consensus 55 ~~~i~~l~~~~~~~~vgagt---vi~~d~~~~A~~aGAd~v~~p~~d----------------------~~v~~~~~~~g 109 (214)
T 1wbh_A 55 VDAIRAIAKEVPEAIVGAGT---VLNPQQLAEVTEAGAQFAISPGLT----------------------EPLLKAATEGT 109 (214)
T ss_dssp HHHHHHHHHHCTTSEEEEES---CCSHHHHHHHHHHTCSCEEESSCC----------------------HHHHHHHHHSS
T ss_pred HHHHHHHHHHCcCCEEeeCE---EEEHHHHHHHHHcCCCEEEcCCCC----------------------HHHHHHHHHhC
Confidence 34677777777665555542 223456677889999999733211 12223333343
Q ss_pred CCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 591 LRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 591 LR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
+.++. |+.|..++.+|..+|||.+++
T Consensus 110 ----~~~i~--G~~t~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 110 ----IPLIP--GISTVSELMLGMDYGLKEFKF 135 (214)
T ss_dssp ----SCEEE--EESSHHHHHHHHHTTCCEEEE
T ss_pred ----CCEEE--ecCCHHHHHHHHHCCCCEEEE
Confidence 44444 499999999999999998876
No 378
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=57.96 E-value=3.6 Score=51.10 Aligned_cols=38 Identities=18% Similarity=0.298 Sum_probs=29.1
Q ss_pred cCCCCEEEeCCCCC-C--------CCcHHHHHHHHHHHHHHHHHHHh
Q psy12805 1368 TTVPRVYAAGDCRR-G--------QSLVVWAISEGRQAAREIDSFLM 1405 (1429)
Q Consensus 1368 TSvPgVFAAGD~a~-g--------~~lvv~Ai~qGr~AA~nI~~~L~ 1405 (1429)
+++||+||||+|+. + ......|+--|+.|++++.+++.
T Consensus 378 ~~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~~ 424 (588)
T 2wdq_A 378 VVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIA 424 (588)
T ss_dssp EEEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHHH
T ss_pred CeeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhh
Confidence 38999999999752 1 22456677889999999988874
No 379
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=57.48 E-value=26 Score=42.33 Aligned_cols=95 Identities=7% Similarity=-0.038 Sum_probs=60.4
Q ss_pred CceEEEccccccccHHHHHHhCCCCc--------------------------------ccccc-------cc-----c--
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPL--------------------------------GNIIP-------KW-----N-- 1275 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V--------------------------------~~iLp-------~~-----d-- 1275 (1429)
-+++|||||..|+-++.++++.|.+| ..+.. .+ +
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 92 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDFG 92 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecccc
Confidence 46999999999999999999877766 00000 00 0
Q ss_pred h---------hhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCC-eeEEEecEEEEecccc
Q psy12805 1276 D---------LIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNS-EKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1276 ~---------lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gs-e~~ieaDlVLlAiG~~ 1339 (1429)
. .+-...+.+.+.+.+++.| +..+.+++.++.. ++ .+.....+++ .+++.+|+||.|-|..
T Consensus 93 ~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~--~~-~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 93 VLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDE--GD-HVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp GSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEEC--SS-CEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred cCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEe--CC-EEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 0 0112346667777776666 5567888888652 23 3443333332 3579999999999976
No 380
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=57.39 E-value=3.9 Score=45.76 Aligned_cols=69 Identities=13% Similarity=-0.026 Sum_probs=47.5
Q ss_pred ChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHH
Q psy12805 535 GVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAAL 614 (1429)
Q Consensus 535 Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla 614 (1429)
....+|....+.|++.|.+-+-++ +....+.++.+. ..++|+..|||++- |+.+.+
T Consensus 39 dp~~~A~~~~~~Ga~~l~vvDL~~---------------~n~~~i~~i~~~-------~~~pv~vgGGir~~-~~~~~l- 94 (260)
T 2agk_A 39 PSSYYAKLYKDRDVQGCHVIKLGP---------------NNDDAAREALQE-------SPQFLQVGGGINDT-NCLEWL- 94 (260)
T ss_dssp CHHHHHHHHHHTTCTTCEEEEESS---------------SCHHHHHHHHHH-------STTTSEEESSCCTT-THHHHT-
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCC---------------CCHHHHHHHHhc-------CCceEEEeCCCCHH-HHHHHh-
Confidence 456678888899999776644432 112223343332 14778899999986 999989
Q ss_pred hcchhhhcchhHH
Q psy12805 615 LGADEIGLSTAPL 627 (1429)
Q Consensus 615 LGAdavg~gt~~L 627 (1429)
+||+-|-+||.++
T Consensus 95 ~Ga~~Viigs~a~ 107 (260)
T 2agk_A 95 KWASKVIVTSWLF 107 (260)
T ss_dssp TTCSCEEECGGGB
T ss_pred cCCCEEEECcHHH
Confidence 9999998887433
No 381
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=57.35 E-value=4.5 Score=49.89 Aligned_cols=53 Identities=23% Similarity=0.378 Sum_probs=38.4
Q ss_pred CccccCCCCEEecCCCCccCCCCEEEeCCCCCC--------CCcHHHHHHHHHHHHHHHHHHH
Q psy12805 1350 DLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRG--------QSLVVWAISEGRQAAREIDSFL 1404 (1429)
Q Consensus 1350 GLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g--------~~lvv~Ai~qGr~AA~nI~~~L 1404 (1429)
||.+|.++.+. |. ..+|.+||+||+|.++.+ ...+..|+--||.|++++.++.
T Consensus 509 Gl~id~~~~Vl-~~-~g~~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~ 569 (572)
T 1d4d_A 509 GLVIDTKAEVK-SE-KTAKPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKFA 569 (572)
T ss_dssp EEEBCTTCEEE-BS-SSSSEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred CeEECCCCeEE-cC-CCCcccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 56667666543 33 334889999999999742 1246678889999999998764
No 382
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=56.41 E-value=11 Score=41.68 Aligned_cols=34 Identities=24% Similarity=0.065 Sum_probs=30.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 594 RVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 594 ~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
++++++-|||+|+.|+.+++. |||.|-+||++.-
T Consensus 182 ~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~ 215 (240)
T 1viz_A 182 TSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYE 215 (240)
T ss_dssp SSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHH
T ss_pred CCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHh
Confidence 579999999999999999877 9999999996553
No 383
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=55.98 E-value=24 Score=43.14 Aligned_cols=54 Identities=6% Similarity=0.010 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHhCCCCCCcEEEEEEEeecCCCceEEEEeC---CCeeEEEecEEEEecccc
Q psy12805 1282 NWSEALNQLLQTNNFPAGIKTVKVEWTKDATGRWKMDEVP---NSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1282 e~~~al~~~Le~~G~~~gv~v~~Ve~~k~~~G~~~~v~~~---gse~~ieaDlVLlAiG~~ 1339 (1429)
.+.+.+.+.+++. +..+.+++.++.. ++ .+.....+ |+.+++.||.||.|.|..
T Consensus 139 ~l~~~L~~~a~~~-v~~~~~v~~~~~~--~~-~v~v~~~~~~~G~~~~i~a~~vVgADG~~ 195 (549)
T 2r0c_A 139 WLAPLLAEAVGER-LRTRSRLDSFEQR--DD-HVRATITDLRTGATRAVHARYLVACDGAS 195 (549)
T ss_dssp HHHHHHHHHHGGG-EECSEEEEEEEEC--SS-CEEEEEEETTTCCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHh-cccCcEEEEEEEe--CC-EEEEEEEECCCCCEEEEEeCEEEECCCCC
Confidence 3455666666555 7788888888652 23 34433322 444689999999999976
No 384
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=55.56 E-value=21 Score=44.97 Aligned_cols=25 Identities=8% Similarity=0.031 Sum_probs=23.3
Q ss_pred ceEEEccccccccHHHHHHhCCCCc
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
+++|||||..||+.|...++.|++|
T Consensus 30 DVIVIGgG~AGl~AAlaLAr~G~kV 54 (651)
T 3ces_A 30 DVIIIGGGHAGTEAAMAAARMGQQT 54 (651)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CEEEECChHHHHHHHHHHHhCCCCE
Confidence 5999999999999999999888887
No 385
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=55.28 E-value=62 Score=34.64 Aligned_cols=88 Identities=18% Similarity=0.104 Sum_probs=56.6
Q ss_pred HHHHHHHHhCCCCeE--EEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhc
Q psy12805 512 ELIYDLKCANPNARI--SVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALN 589 (1429)
Q Consensus 512 qlI~~Lk~~~~~~pV--~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~ 589 (1429)
+.|+.||+.+++.|| .+|+. . ...+.+..++++|+|+|++-+..+ ...+.++.+...+.
T Consensus 48 ~~i~~lr~~~~~~~i~ld~~l~-d-~p~~~~~~~~~aGad~i~vh~~~~-----------------~~~~~~~~~~~~~~ 108 (218)
T 3jr2_A 48 KAVSTLRHNHPNHILVCDMKTT-D-GGAILSRMAFEAGADWITVSAAAH-----------------IATIAACKKVADEL 108 (218)
T ss_dssp HHHHHHHHHCTTSEEEEEEEEC-S-CHHHHHHHHHHHTCSEEEEETTSC-----------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEEeec-c-cHHHHHHHHHhcCCCEEEEecCCC-----------------HHHHHHHHHHHHHh
Confidence 578888888655555 67876 2 233467889999999999977631 12234455555555
Q ss_pred CCCCceEEEE-cCCcccHHHHHHHHHhcchhhhc
Q psy12805 590 NLRSRVVLQA-DGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 590 gLR~~V~Lia-sGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
|+ ...+ .=+..|..++..+..+|+|.+.+
T Consensus 109 g~----~~~~d~l~~~T~~~~~~~~~~g~d~v~~ 138 (218)
T 3jr2_A 109 NG----EIQIEIYGNWTMQDAKAWVDLGITQAIY 138 (218)
T ss_dssp TC----EEEEECCSSCCHHHHHHHHHTTCCEEEE
T ss_pred CC----ccceeeeecCCHHHHHHHHHcCccceee
Confidence 54 2332 22346788888888889986653
No 386
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=55.26 E-value=28 Score=42.03 Aligned_cols=96 Identities=6% Similarity=-0.033 Sum_probs=60.8
Q ss_pred CCceEEEccccccccHHHHHHhCCCCc--------------------------------ccccc-------cc-----c-
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGCPL--------------------------------GNIIP-------KW-----N- 1275 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc~V--------------------------------~~iLp-------~~-----d- 1275 (1429)
.-+++|||||..|+-++..+++.|.+| ..+.. .| +
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 90 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDF 90 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceeccc
Confidence 356999999999999999999877766 00000 00 0
Q ss_pred -------h--h-hccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCC-eeEEEecEEEEecccc
Q psy12805 1276 -------D--L-IYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNS-EKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1276 -------~--l-vf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gs-e~~ieaDlVLlAiG~~ 1339 (1429)
+ . +-...+.+.+.+.+++.| +..+.+++.++.. ++ .+.....+++ .+++.+|+||.|-|..
T Consensus 91 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~--~~-~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 91 GVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDD--GA-GVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp GGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEE--TT-EEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred ccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEc--CC-eEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 0 0 112346666777676666 5567888888653 23 3333332332 3579999999999976
No 387
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=54.24 E-value=22 Score=39.75 Aligned_cols=67 Identities=10% Similarity=0.137 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccCchhhhhhcc-Ccc
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLGPERYIANEL-DLT 1352 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~pp~~~Lle~l-GLe 1352 (1429)
.+.+.+.+.++++| +.++.++++++.. .++.+.....+|+..++.||.||+|+|.. ...|++.+ |++
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~a~~VV~A~G~~--s~~l~~~~~g~~ 220 (369)
T 3dme_A 151 ALMLAYQGDAESDGAQLVFHTPLIAGRVR--PEGGFELDFGGAEPMTLSCRVLINAAGLH--APGLARRIEGIP 220 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSSEEEEECTTSCEEEEEEEEEECCGGG--HHHHHHTEETSC
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCceEEEEECCCceeEEEeCEEEECCCcc--hHHHHHHhcCCC
Confidence 56677777788887 5668888888652 33445544444444689999999999975 34566666 654
No 388
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=53.43 E-value=25 Score=40.71 Aligned_cols=60 Identities=15% Similarity=0.302 Sum_probs=43.9
Q ss_pred CCCHHHHHHHHHHHHHhCC-CCeEEEEeccccChHH-HHHHHHhcCCcEEEEe--cCCCCCCcc
Q psy12805 504 IYSIEDLAELIYDLKCANP-NARISVKLVSEVGVGV-VASGVAKGKAEHIVIS--GHDGGTGAS 563 (1429)
Q Consensus 504 i~siedL~qlI~~Lk~~~~-~~pV~VKLv~e~Gvg~-vA~~~akaGaD~I~Is--G~~GGTgaa 563 (1429)
..+++++.++|+.||+..| +.||.+=.=-..|.+. -+..+.++||+.|..+ |.++++|..
T Consensus 174 ~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG~~aGN~ 237 (345)
T 1nvm_A 174 AMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNA 237 (345)
T ss_dssp CCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBC
T ss_pred ccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEecchhccCCccCc
Confidence 4468999999999999986 7898887444456665 3355789999999865 665555443
No 389
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=53.26 E-value=27 Score=42.82 Aligned_cols=57 Identities=14% Similarity=0.038 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEE-e--CCCeeEEEecEEEEeccccCc
Q psy12805 1283 WSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDE-V--PNSEKIFKCDLVLLAMGFLGP 1341 (1429)
Q Consensus 1283 ~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~-~--~gse~~ieaDlVLlAiG~~pp 1341 (1429)
+.+.+.+.+++.| +.++.+++.+... ++|++.-+. . +++..++.+|.||+|+|-...
T Consensus 252 l~~~L~~~~~~~gv~i~~~~~v~~l~~~--~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 252 IIDTLRKAAKEQGIDTRLNSRVVKLVVN--DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHHTTCCEECSEEEEEEEEC--TTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEC--CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 4455556666666 4457777777542 225543222 2 444457999999999996543
No 390
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=53.09 E-value=16 Score=42.34 Aligned_cols=27 Identities=7% Similarity=-0.073 Sum_probs=23.6
Q ss_pred CCceEEEccccccccHHHHHHhCCCCc
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
+-+++|||||..|+-+|..+++.|.+|
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V 49 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDC 49 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCE
Confidence 346999999999999999999878766
No 391
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=52.98 E-value=60 Score=40.75 Aligned_cols=77 Identities=19% Similarity=0.161 Sum_probs=57.2
Q ss_pred EeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHH
Q psy12805 529 KLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFD 608 (1429)
Q Consensus 529 KLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~D 608 (1429)
=|...+-...+...+.+.++|+|-||..-+.+ --....+.++.+.|.+.|+|+++.|++-|.+-+ .|
T Consensus 639 DLGvdVPpEeIVeAA~EedADVVGLSsLLTt~------------dihL~~MkevIelLrE~GlrDkIkVIVGGa~~t-qd 705 (763)
T 3kp1_A 639 YLGTSVPVEKLVDAAIELKADAILASTIISHD------------DIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVT-PE 705 (763)
T ss_dssp ECCSSBCHHHHHHHHHHTTCSEEEEECCCCGG------------GHHHHHHHHHHHHHHHTTCTTTSEEEEECTTCC-HH
T ss_pred ECCCCCCHHHHHHHHHHcCCCEEEEeccccCc------------hhhHHHHHHHHHHHHhcCCCCCCEEEEECCCCC-HH
Confidence 34445556777888899999999999875321 014566888899999999999999998666655 56
Q ss_pred HHHHHHhcchhh
Q psy12805 609 VVVAALLGADEI 620 (1429)
Q Consensus 609 v~kAlaLGAdav 620 (1429)
.++ .+|||++
T Consensus 706 ~Ak--eIGADa~ 715 (763)
T 3kp1_A 706 VAV--KQGVDAG 715 (763)
T ss_dssp HHH--TTTCSEE
T ss_pred HHH--HcCCcEE
Confidence 654 6788876
No 392
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=52.74 E-value=9.2 Score=44.60 Aligned_cols=91 Identities=14% Similarity=0.145 Sum_probs=51.3
Q ss_pred CceEEEccccccccHHHHHHhCCC--Cc-----ccccccc----c-hhhcc----chHHHHHHHHHHhCC--CCCCcEEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGC--PL-----GNIIPKW----N-DLIYH----NNWSEALNQLLQTNN--FPAGIKTV 1303 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc--~V-----~~iLp~~----d-~lvf~----~e~~~al~~~Le~~G--~~~gv~v~ 1303 (1429)
++++|||||..|+..+..+++.|. +| ...+|.. . ..... .++.....+.+.+.+ +.. .++.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 579999999999999999998887 45 1112211 1 00100 111122334444555 333 4455
Q ss_pred EEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1304 KVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1304 ~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+.. +.+ . +...+ .+++.+|.+++|+|.+|
T Consensus 81 ~id~----~~~-~-v~~~~-g~~~~~d~lvlAtG~~p 110 (404)
T 3fg2_P 81 SIDR----EGR-K-LLLAS-GTAIEYGHLVLATGARN 110 (404)
T ss_dssp EEET----TTT-E-EEESS-SCEEECSEEEECCCEEE
T ss_pred EEEC----CCC-E-EEECC-CCEEECCEEEEeeCCCc
Confidence 5532 222 1 22333 24789999999999874
No 393
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=52.41 E-value=9.1 Score=44.72 Aligned_cols=92 Identities=11% Similarity=0.086 Sum_probs=53.6
Q ss_pred CceEEEccccccccHHHHHHhCCCC--c-----ccccccc----c-hhhc----cchHHHHHHHHHHhCC--CCCCcEEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCP--L-----GNIIPKW----N-DLIY----HNNWSEALNQLLQTNN--FPAGIKTV 1303 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~--V-----~~iLp~~----d-~lvf----~~e~~~al~~~Le~~G--~~~gv~v~ 1303 (1429)
.+++|||||..|+..+..+++.|.+ | ...+|.. . ..+. ..++.....+.+++.+ +..+.++.
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 89 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVV 89 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCEE
T ss_pred CcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEEE
Confidence 5799999999999999999988876 4 1111111 0 0000 1122222334455555 44455666
Q ss_pred EEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1304 KVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1304 ~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+.. +.+ . +...+ .+.+.+|.+++|+|.+|
T Consensus 90 ~id~----~~~-~-v~~~~-g~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 90 SLDP----AAH-T-VKLGD-GSAIEYGKLIWATGGDP 119 (415)
T ss_dssp EEET----TTT-E-EEETT-SCEEEEEEEEECCCEEC
T ss_pred EEEC----CCC-E-EEECC-CCEEEeeEEEEccCCcc
Confidence 6632 222 1 22333 34799999999999874
No 394
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=51.77 E-value=19 Score=39.40 Aligned_cols=81 Identities=17% Similarity=0.151 Sum_probs=53.1
Q ss_pred HHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcC
Q psy12805 511 AELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNN 590 (1429)
Q Consensus 511 ~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~g 590 (1429)
.+.|+.+++..|+.-+..-.+ =....+..+.++|||+|++ + ++ . . ++.+.....|
T Consensus 65 ~~~i~~l~~~~~~~~igagtv---l~~d~~~~A~~aGAd~v~~-p---~~-------------d--~---~v~~~~~~~g 119 (225)
T 1mxs_A 65 LKAIQVLREQRPELCVGAGTV---LDRSMFAAVEAAGAQFVVT-P---GI-------------T--E---DILEAGVDSE 119 (225)
T ss_dssp HHHHHHHHHHCTTSEEEEECC---CSHHHHHHHHHHTCSSEEC-S---SC-------------C--H---HHHHHHHHCS
T ss_pred HHHHHHHHHhCcccEEeeCeE---eeHHHHHHHHHCCCCEEEe-C---CC-------------C--H---HHHHHHHHhC
Confidence 456777888777766666543 2345677789999999973 2 11 0 1 2222223333
Q ss_pred CCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 591 LRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 591 LR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
+.++. |+.|..++.+|..+|||.+++
T Consensus 120 ----~~~i~--G~~t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 120 ----IPLLP--GISTPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp ----SCEEC--EECSHHHHHHHHTTTCCEEEE
T ss_pred ----CCEEE--eeCCHHHHHHHHHCCCCEEEE
Confidence 34443 489999999999999998876
No 395
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=51.66 E-value=24 Score=41.01 Aligned_cols=26 Identities=12% Similarity=0.052 Sum_probs=23.8
Q ss_pred CceEEEccccccccHHHHHHhCCCC-c
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCP-L 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~-V 1267 (1429)
.+++|||||..|+-+|.++++.|.+ |
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v 31 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKV 31 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeE
Confidence 4699999999999999999988988 6
No 396
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=51.65 E-value=8.9 Score=45.50 Aligned_cols=96 Identities=6% Similarity=-0.023 Sum_probs=50.2
Q ss_pred ceEEEccccccccHHHHHHhCCCC--c-----cc-------cccccchhhccc---hHHHHHHHHHHhCCC--CCCcEEE
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCP--L-----GN-------IIPKWNDLIYHN---NWSEALNQLLQTNNF--PAGIKTV 1303 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~--V-----~~-------iLp~~d~lvf~~---e~~~al~~~Le~~G~--~~gv~v~ 1303 (1429)
+++|||||.-|+..+.-+++.|.+ | .. .||.+..-.... .+.....+.++++++ ..+.+++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 599999999999888887777743 3 11 111110000000 011111233344453 3355555
Q ss_pred EEEEeecCCCceEEEE-eCCCeeEEEecEEEEeccccCc
Q psy12805 1304 KVEWTKDATGRWKMDE-VPNSEKIFKCDLVLLAMGFLGP 1341 (1429)
Q Consensus 1304 ~Ve~~k~~~G~~~~v~-~~gse~~ieaDlVLlAiG~~pp 1341 (1429)
.+.. ......... ..++..++.+|.+|+|+|.+|.
T Consensus 82 ~id~---~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~ 117 (437)
T 4eqs_A 82 AIND---ERQTVSVLNRKTNEQFEESYDKLILSPGASAN 117 (437)
T ss_dssp EEET---TTTEEEEEETTTTEEEEEECSEEEECCCEEEC
T ss_pred EEEc---cCcEEEEEeccCCceEEEEcCEEEECCCCccc
Confidence 5532 222222222 2344567899999999999853
No 397
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=51.58 E-value=7.3 Score=46.11 Aligned_cols=95 Identities=7% Similarity=0.068 Sum_probs=51.2
Q ss_pred ceEEEccccccccHHHHHHhC--CCCc-----cccccc-------cc-hhh-ccchHHHHHHHHHHhCCC--CCCcEEEE
Q psy12805 1243 GLRIQAARCMECGVPFCQSSH--GCPL-----GNIIPK-------WN-DLI-YHNNWSEALNQLLQTNNF--PAGIKTVK 1304 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~--Gc~V-----~~iLp~-------~d-~lv-f~~e~~~al~~~Le~~G~--~~gv~v~~ 1304 (1429)
+++|||||.-|+..+..+++. |.+| ...++. +. ... ...++.....+.+++.++ ..+..+..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 81 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEITA 81 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEEE
Confidence 589999999999988888776 6666 111111 10 000 011112222344555553 23455555
Q ss_pred EEEeecCCCceEEEE-eCCCeeEEEecEEEEeccccC
Q psy12805 1305 VEWTKDATGRWKMDE-VPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1305 Ve~~k~~~G~~~~v~-~~gse~~ieaDlVLlAiG~~p 1340 (1429)
+.. .+..+.... .+|+..++.+|.|++|+|.+|
T Consensus 82 i~~---~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 82 IQP---KEHQVTVKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp EET---TTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred EeC---CCCEEEEEecCCCceEEEeCCEEEEcCCCCc
Confidence 532 223333222 124334699999999999884
No 398
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=51.17 E-value=37 Score=38.74 Aligned_cols=101 Identities=15% Similarity=0.008 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccc---cC--------hHHHHHHHHhcCCcEEEEec-CCCCCCccccccccccCCCh
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSE---VG--------VGVVASGVAKGKAEHIVISG-HDGGTGASSWTGIKNAGLPW 575 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e---~G--------vg~vA~~~akaGaD~I~IsG-~~GGTgaap~~~~~~~GiP~ 575 (1429)
+.+.++++..++. +.|+.+=+.+. ++ +...+..+.+.|+|+|-+.- .+ ++ | .
T Consensus 142 ~~i~~v~~~~~~~--G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~-~~-----------g--~ 205 (304)
T 1to3_A 142 NMVKEFNELCHSN--GLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLY-GK-----------G--A 205 (304)
T ss_dssp HHHHHHHHHHHTT--TCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGG-GC-----------S--C
T ss_pred HHHHHHHHHHHHc--CCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcC-CC-----------C--C
Confidence 4455555555543 68888776431 11 22235556778999997653 12 11 1 2
Q ss_pred HHHHHHHHHHHHhcCCCCceE-EEEcCCcccHHH----HHHHHHhcchhhhcchhHHH
Q psy12805 576 ELGVAETHQVLALNNLRSRVV-LQADGQIRTGFD----VVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 576 ~laL~ev~q~L~~~gLR~~V~-LiasGGIrtg~D----v~kAlaLGAdavg~gt~~L~ 628 (1429)
...+.++.+.+..+ ..++ |+++||+ +..+ +..++..||+.|-+|++.+-
T Consensus 206 ~~~~~~vv~~~~~~---~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~q 259 (304)
T 1to3_A 206 RSDLLTASQRLNGH---INMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVWS 259 (304)
T ss_dssp HHHHHHHHHHHHHT---CCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHHG
T ss_pred HHHHHHHHHhcccc---CCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHhC
Confidence 23344444444332 2578 9999999 5533 66778889999999987664
No 399
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=50.85 E-value=16 Score=42.67 Aligned_cols=91 Identities=11% Similarity=0.101 Sum_probs=51.7
Q ss_pred CceEEEccccccccHHHHHHhCCCC--c-----cccccccch-h---hcc-----chHHHHHHHHHHhCC--CCCCcEEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCP--L-----GNIIPKWND-L---IYH-----NNWSEALNQLLQTNN--FPAGIKTV 1303 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~--V-----~~iLp~~d~-l---vf~-----~e~~~al~~~Le~~G--~~~gv~v~ 1303 (1429)
++++|||||..|+..+..+++.|.+ | ...+|.... + ... .++ ....+.+++.+ +..+.++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEESCCEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEeCCEEE
Confidence 4799999999999999999988877 4 111121100 0 000 011 11123344455 34455666
Q ss_pred EEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1304 KVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1304 ~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.+.. +.+ . +...+. +++.+|.|++|+|..|
T Consensus 82 ~id~----~~~-~-v~~~~g-~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 82 ALDV----QTR-T-ISLDDG-TTLSADAIVIATGSRA 111 (410)
T ss_dssp EEET----TTT-E-EEETTS-CEEECSEEEECCCEEE
T ss_pred EEEC----CCC-E-EEECCC-CEEECCEEEEccCCcc
Confidence 6632 222 2 223332 4799999999999874
No 400
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=50.61 E-value=3.5 Score=48.59 Aligned_cols=26 Identities=4% Similarity=0.006 Sum_probs=22.8
Q ss_pred CceEEEccccccccHHHHHHh--CCCCc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSS--HGCPL 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~--~Gc~V 1267 (1429)
++++|||||..|+..+..+++ .|.+|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~V 30 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKI 30 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeE
Confidence 579999999999999999988 56676
No 401
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=50.50 E-value=72 Score=37.00 Aligned_cols=139 Identities=10% Similarity=0.032 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEecccc-------C----------hHHHHHHH--HhcCCcEEEEecCCCCC----Ccc
Q psy12805 507 IEDLAELIYDLKCANPNARISVKLVSEV-------G----------VGVVASGV--AKGKAEHIVISGHDGGT----GAS 563 (1429)
Q Consensus 507 iedL~qlI~~Lk~~~~~~pV~VKLv~e~-------G----------vg~vA~~~--akaGaD~I~IsG~~GGT----gaa 563 (1429)
.++|.++.++.++. +.|+.+-+.+.. + +...++.+ .+.|+|++.+.=. |.. |.+
T Consensus 146 ~~~l~rv~~ec~~~--GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p-~~~~~v~g~~ 222 (332)
T 3iv3_A 146 QAYIERIGSECQAE--DIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKVEVP-VNMVYVEGFA 222 (332)
T ss_dssp HHHHHHHHHHHHHH--TCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEECCS-SCGGGBTTTC
T ss_pred HHHHHHHHHHHHHc--CCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHHHHhhcCcCCcEEEEecC-CChhhhcccc
Confidence 34566666666655 688887654411 1 22233444 3559999998621 110 000
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCCceEEE-EcCCcccHHHH----HHHHHhcc--hhhhcchhHHHHhcccccc
Q psy12805 564 SWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQ-ADGQIRTGFDV----VVAALLGA--DEIGLSTAPLITMGCTMMR 636 (1429)
Q Consensus 564 p~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Li-asGGIrtg~Dv----~kAlaLGA--davg~gt~~L~algc~~~r 636 (1429)
..........+..... .+... ..+++| .+||.. ..++ ..|+..|| ..|-+|++.+-
T Consensus 223 ----~~~~~y~~~ea~~~f~-~~~~a---~~~P~v~lsgG~~-~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq-------- 285 (332)
T 3iv3_A 223 ----EGEVVYSKEEAAQAFR-EQEAS---TDLPYIYLSAGVS-AELFQETLVFAHKAGAKFNGVLCGRATWA-------- 285 (332)
T ss_dssp ----SSCCCBCHHHHHHHHH-HHHHT---CSSCEEEECTTCC-HHHHHHHHHHHHHHTCCCCEEEECHHHHT--------
T ss_pred ----cccccccHHHHHHHHH-HHHhc---CCCCEEEECCCCC-HHHHHHHHHHHHHcCCCcceEEeeHHHHH--------
Confidence 0012222233322222 22222 367855 799984 4343 45678899 77877875543
Q ss_pred ccccCCCCccceecCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHhcCCCChhhh
Q psy12805 637 KCHLNTCPVGIATQDPELRKKFAGKPEHVINYLFMLAEEVRTHMAKLGIRKFADL 691 (1429)
Q Consensus 637 ~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~~~l~~eLr~iMa~mGi~sl~El 691 (1429)
+.+..|.+.=.+..+++|..-|..+|++|
T Consensus 286 --------------------------~~v~~~~~~~~~~~~~~l~~~g~~~i~~l 314 (332)
T 3iv3_A 286 --------------------------GSVQVYMEEGKEAARQWLRTSGLQNINEL 314 (332)
T ss_dssp --------------------------THHHHHHHHCHHHHHHHHTTHHHHHHHHH
T ss_pred --------------------------hhhhhhccccHHHHHHHHHHHhHHHHHHH
Confidence 22334444444567778888888888776
No 402
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=50.42 E-value=56 Score=36.71 Aligned_cols=85 Identities=12% Similarity=0.045 Sum_probs=53.7
Q ss_pred HHHHHHHhCCCCeEEEEeccccChHH-HHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCC
Q psy12805 513 LIYDLKCANPNARISVKLVSEVGVGV-VASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNL 591 (1429)
Q Consensus 513 lI~~Lk~~~~~~pV~VKLv~e~Gvg~-vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gL 591 (1429)
.+..+|+.. +.||..| ...+.. ....+..+|||.|.|--.. +|.. -+.+..+.....|+
T Consensus 104 ~l~~ir~~v-~lPvl~k---dfiid~~qv~~A~~~GAD~VlLi~a~---------------l~~~-~l~~l~~~a~~lGl 163 (272)
T 3qja_A 104 DLDAVRASV-SIPVLRK---DFVVQPYQIHEARAHGADMLLLIVAA---------------LEQS-VLVSMLDRTESLGM 163 (272)
T ss_dssp HHHHHHHHC-SSCEEEE---SCCCSHHHHHHHHHTTCSEEEEEGGG---------------SCHH-HHHHHHHHHHHTTC
T ss_pred HHHHHHHhC-CCCEEEC---ccccCHHHHHHHHHcCCCEEEEeccc---------------CCHH-HHHHHHHHHHHCCC
Confidence 344455554 7899999 444443 2455678999999985432 1221 23444444444553
Q ss_pred CCceEEEEcCCcccHHHHHHHHHhcchhhhcc
Q psy12805 592 RSRVVLQADGQIRTGFDVVVAALLGADEIGLS 623 (1429)
Q Consensus 592 R~~V~LiasGGIrtg~Dv~kAlaLGAdavg~g 623 (1429)
.+++ .+.|..++..|+.+||+.+|+.
T Consensus 164 ----~~lv--ev~t~ee~~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 164 ----TALV--EVHTEQEADRALKAGAKVIGVN 189 (272)
T ss_dssp ----EEEE--EESSHHHHHHHHHHTCSEEEEE
T ss_pred ----cEEE--EcCCHHHHHHHHHCCCCEEEEC
Confidence 3332 2588899999999999998876
No 403
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=50.38 E-value=22 Score=41.15 Aligned_cols=59 Identities=14% Similarity=0.136 Sum_probs=44.5
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHH-HHHHHHhcCCcEEEEe--cCCCCCCc
Q psy12805 504 IYSIEDLAELIYDLKCANPNARISVKLVSEVGVGV-VASGVAKGKAEHIVIS--GHDGGTGA 562 (1429)
Q Consensus 504 i~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~-vA~~~akaGaD~I~Is--G~~GGTga 562 (1429)
..+++++.++|..|++..|+.||.+=.=-..|.+. -+..+.++|++.|..+ |.++++|.
T Consensus 194 ~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG~~aGN 255 (337)
T 3ble_A 194 VLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASINGLGERAGN 255 (337)
T ss_dssp CCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSSTTCB
T ss_pred CcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEecccccccccc
Confidence 45789999999999999888888887554557665 3455788999999855 66555544
No 404
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=50.15 E-value=20 Score=43.59 Aligned_cols=69 Identities=19% Similarity=0.185 Sum_probs=46.0
Q ss_pred hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh
Q psy12805 536 VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL 615 (1429)
Q Consensus 536 vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL 615 (1429)
....+..+.++|+|+|.|+...|.. ..+...+.++.+.+ ..++|++ |.+.|..++..+..+
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g~~------------~~~~~~v~~i~~~~------p~~~Vi~-g~v~t~e~a~~l~~a 290 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHGHS------------KGVIERVRWVKQTF------PDVQVIG-GNIATAEAAKALAEA 290 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCCSB------------HHHHHHHHHHHHHC------TTSEEEE-EEECSHHHHHHHHHT
T ss_pred hHHHHHHHhhcccceEEecccCCcc------------hhHHHHHHHHHHHC------CCceEEE-eeeCcHHHHHHHHHc
Confidence 3456777899999999998664320 11222333333221 1466766 779999999999999
Q ss_pred cchhhhcc
Q psy12805 616 GADEIGLS 623 (1429)
Q Consensus 616 GAdavg~g 623 (1429)
|||++-+|
T Consensus 291 GaD~I~vg 298 (490)
T 4avf_A 291 GADAVKVG 298 (490)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99998654
No 405
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=49.92 E-value=14 Score=44.18 Aligned_cols=96 Identities=11% Similarity=0.050 Sum_probs=52.2
Q ss_pred CceEEEccccccccHHHHHHhC--CCCc-----ccc-------ccccch-h-hccchHHHHHHHHH-HhCC--CCCCcEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSH--GCPL-----GNI-------IPKWND-L-IYHNNWSEALNQLL-QTNN--FPAGIKT 1302 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~--Gc~V-----~~i-------Lp~~d~-l-vf~~e~~~al~~~L-e~~G--~~~gv~v 1302 (1429)
.+++|||||..|+..+..+++. |.+| ... +|.+.. . ....++.....+.+ +..+ +..+.++
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 4799999999999999888875 6666 111 111100 0 00111111122333 3335 3345566
Q ss_pred EEEEEeecCCCceEEEE-eCCCeeEEEecEEEEeccccC
Q psy12805 1303 VKVEWTKDATGRWKMDE-VPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1303 ~~Ve~~k~~~G~~~~v~-~~gse~~ieaDlVLlAiG~~p 1340 (1429)
..+.. .+..+.... .+|+..++.+|.||+|+|..|
T Consensus 117 ~~i~~---~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 117 TKVDT---EKKIVYAEHTKTKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp EEEET---TTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred EEEEC---CCCEEEEEEcCCCceEEEEcCEEEECCCCcc
Confidence 66633 223333222 124334799999999999874
No 406
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=49.82 E-value=17 Score=41.02 Aligned_cols=90 Identities=13% Similarity=0.189 Sum_probs=0.0
Q ss_pred ceEEEccccccccHHHHHHh---CCCCc----------cccccccc----------------------------------
Q psy12805 1243 GLRIQAARCMECGVPFCQSS---HGCPL----------GNIIPKWN---------------------------------- 1275 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~---~Gc~V----------~~iLp~~d---------------------------------- 1275 (1429)
+++|||||..|+-++..+++ .|.+| .++.....
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Q ss_pred ---------------------hhhccchHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEE
Q psy12805 1276 ---------------------DLIYHNNWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLV 1332 (1429)
Q Consensus 1276 ---------------------~lvf~~e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlV 1332 (1429)
..+..+.+...++.+.+..+ +.++.++.+|+. .++.|.....+|+. +.+|.|
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~---~~~~~~v~~~~g~~--~~ad~v 157 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINL---RDDKWEVSKQTGSP--EQFDLI 157 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEE---CSSSEEEEESSSCC--EEESEE
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEE---cCCEEEEEECCCCE--EEcCEE
Q ss_pred EEecc
Q psy12805 1333 LLAMG 1337 (1429)
Q Consensus 1333 LlAiG 1337 (1429)
|+|+.
T Consensus 158 V~A~p 162 (342)
T 3qj4_A 158 VLTMP 162 (342)
T ss_dssp EECSC
T ss_pred EECCC
No 407
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=49.35 E-value=6.1 Score=45.77 Aligned_cols=92 Identities=9% Similarity=-0.079 Sum_probs=51.2
Q ss_pred CCCceEEEccccccccHHHHHHhCCCCc-----cccccccch----hhc----cchHHHHHHHHHHhCC--CCCCcEEEE
Q psy12805 1240 VRKGLRIQAARCMECGVPFCQSSHGCPL-----GNIIPKWND----LIY----HNNWSEALNQLLQTNN--FPAGIKTVK 1304 (1429)
Q Consensus 1240 ~pk~lvVIGaGcIgcE~a~c~s~~Gc~V-----~~iLp~~d~----lvf----~~e~~~al~~~Le~~G--~~~gv~v~~ 1304 (1429)
-..+++|||||.-|+..+..+++.| +| ....+.... .+. ..++.....+.+++.+ +..+.++..
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 3568999999999999999888888 77 111111000 000 0111111233444455 344555665
Q ss_pred EEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1305 VEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1305 Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
+.. +.. ... .++ +++++|.||+|+|.+|
T Consensus 86 id~----~~~-~V~-~~g--~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 86 IDR----GRK-VVI-TEK--GEVPYDTLVLATGARA 113 (367)
T ss_dssp EET----TTT-EEE-ESS--CEEECSEEEECCCEEE
T ss_pred EEC----CCC-EEE-ECC--cEEECCEEEECCCCCC
Confidence 632 222 222 233 4699999999999885
No 408
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=49.01 E-value=42 Score=36.91 Aligned_cols=73 Identities=19% Similarity=0.177 Sum_probs=44.9
Q ss_pred HHHHHHHHhcCCcEEEEe--cCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHH
Q psy12805 537 GVVASGVAKGKAEHIVIS--GHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAAL 614 (1429)
Q Consensus 537 g~vA~~~akaGaD~I~Is--G~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla 614 (1429)
-..+..+.+.|+.-|++. +++|. ..|....+ +..+.+.. .+++|+++||+++-.|+.+. .
T Consensus 154 ~~~~~~~~~~g~~eil~t~Id~DGt----------~~G~d~~l-~~~l~~~~------~~ipviasGGv~~~~Dl~~l-~ 215 (243)
T 4gj1_A 154 MEVLDFYSNKGLKHILCTDISKDGT----------MQGVNVRL-YKLIHEIF------PNICIQASGGVASLKDLENL-K 215 (243)
T ss_dssp HHHHHHHHTTTCCEEEEEETTC---------------CCCHHH-HHHHHHHC------TTSEEEEESCCCSHHHHHHT-T
T ss_pred HHHHHHHhhcCCcEEEeeeeccccc----------ccCCCHHH-HHHHHHhc------CCCCEEEEcCCCCHHHHHHH-H
Confidence 345666788899999887 44543 34555432 33333321 35899999999999999654 3
Q ss_pred hcchhhhcchhHH
Q psy12805 615 LGADEIGLSTAPL 627 (1429)
Q Consensus 615 LGAdavg~gt~~L 627 (1429)
-+++.+-+|++++
T Consensus 216 ~~~~gvivg~Al~ 228 (243)
T 4gj1_A 216 GICSGVIVGKALL 228 (243)
T ss_dssp TTCSEEEECHHHH
T ss_pred ccCchhehHHHHH
Confidence 3466666666543
No 409
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=48.97 E-value=18 Score=43.37 Aligned_cols=26 Identities=8% Similarity=-0.064 Sum_probs=23.7
Q ss_pred CceEEEccccccccHHHHHHhCCCCc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
.+++|||||.-|+..+..+++.|.+|
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~G~~V 51 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQLGMKV 51 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeE
Confidence 57999999999999999999888887
No 410
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=48.57 E-value=49 Score=34.07 Aligned_cols=71 Identities=17% Similarity=0.025 Sum_probs=52.0
Q ss_pred ccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHH
Q psy12805 533 EVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVA 612 (1429)
Q Consensus 533 e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kA 612 (1429)
.+-...+...+.+.++|+|.||...+ +....+.++.+.|.+.+++ ++.|++.| .-...|...+
T Consensus 55 ~~p~e~lv~aa~~~~~diV~lS~~~~---------------~~~~~~~~~i~~L~~~g~~-~i~v~vGG-~~~~~~~~~l 117 (161)
T 2yxb_A 55 RQTPEQVAMAAVQEDVDVIGVSILNG---------------AHLHLMKRLMAKLRELGAD-DIPVVLGG-TIPIPDLEPL 117 (161)
T ss_dssp BCCHHHHHHHHHHTTCSEEEEEESSS---------------CHHHHHHHHHHHHHHTTCT-TSCEEEEE-CCCHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeech---------------hhHHHHHHHHHHHHhcCCC-CCEEEEeC-CCchhcHHHH
Confidence 44566677878889999999998753 3455677788888888775 47877754 5556777666
Q ss_pred HHhcchhh
Q psy12805 613 ALLGADEI 620 (1429)
Q Consensus 613 laLGAdav 620 (1429)
-.+|||++
T Consensus 118 ~~~G~d~v 125 (161)
T 2yxb_A 118 RSLGIREI 125 (161)
T ss_dssp HHTTCCEE
T ss_pred HHCCCcEE
Confidence 78999963
No 411
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=48.11 E-value=39 Score=38.89 Aligned_cols=58 Identities=10% Similarity=0.198 Sum_probs=42.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHH-HHHHHHhcCCcEEEEe--cCCCCCCc
Q psy12805 504 IYSIEDLAELIYDLKCANPNARISVKLVSEVGVGV-VASGVAKGKAEHIVIS--GHDGGTGA 562 (1429)
Q Consensus 504 i~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~-vA~~~akaGaD~I~Is--G~~GGTga 562 (1429)
.-.++++.++|..||+.. +.||.+=.=-..|.+. -+..+.++|+|.|..+ |.++++|.
T Consensus 168 ~~~P~~~~~lv~~l~~~~-~~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~GlG~~~GN 228 (320)
T 3dxi_A 168 GITPKEVKNLLKEVRKYT-HVPVGFHGHDNLQLGLINSITAIDDGIDFIDATITGMGRGAGN 228 (320)
T ss_dssp CCCHHHHHHHHHHHHHHC-CSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSSTTCB
T ss_pred CCCHHHHHHHHHHHHHhC-CCeEEEEeCCCCccHHHHHHHHHHhCCCEEEEeccccCCcccc
Confidence 447799999999999987 4888887554557665 2344678999999876 66555543
No 412
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=47.68 E-value=36 Score=42.46 Aligned_cols=58 Identities=7% Similarity=-0.015 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHhCC----CCCCcEEEEEEEeecCCC-ceEEEEe------CCCeeEEEecEEEEecccc
Q psy12805 1282 NWSEALNQLLQTNN----FPAGIKTVKVEWTKDATG-RWKMDEV------PNSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1282 e~~~al~~~Le~~G----~~~gv~v~~Ve~~k~~~G-~~~~v~~------~gse~~ieaDlVLlAiG~~ 1339 (1429)
.+.+.+.+.+++.| +..+.+++.++...+.++ .+..... +|+.+++.+|.||.|.|..
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~ 210 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGAR 210 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcc
Confidence 56667777777654 556888888865321112 3433322 3555689999999999987
No 413
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=47.66 E-value=18 Score=41.86 Aligned_cols=27 Identities=11% Similarity=0.069 Sum_probs=24.0
Q ss_pred CCceEEEccccccccHHHHHHhCCCCc
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
+.+++|||||..|+-++.++++.|.+|
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v 52 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDV 52 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCE
Confidence 457999999999999999999878776
No 414
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=47.56 E-value=14 Score=44.21 Aligned_cols=48 Identities=17% Similarity=0.051 Sum_probs=40.1
Q ss_pred CCcc-CCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Q psy12805 1365 TYLT-TVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFLMGTSTLPDV 1413 (1429)
Q Consensus 1365 ~~~T-SvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g~~~~p~~ 1413 (1429)
+++| .++++|.||++++. .--..|..+|..|+.|+.+.+.|++....+
T Consensus 322 tle~k~~~~Lf~AGqi~G~-~Gy~eAaa~Gl~AG~naa~~~~g~~p~~l~ 370 (443)
T 3g5s_A 322 TLEFREAEGLYAAGVLAGV-EGYLESAATGFLAGLNAARKALGLPPVAPP 370 (443)
T ss_dssp TSEETTEEEEEECGGGGTB-CSHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred hceecCCCCEEECcccccc-HHHHHHHHhHHHHHHHHHHHhcCCCCCCCC
Confidence 6777 69999999999764 455799999999999999999998765443
No 415
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=47.56 E-value=11 Score=44.49 Aligned_cols=25 Identities=4% Similarity=-0.112 Sum_probs=21.0
Q ss_pred CceEEEccccccccHHHHHHhCCCC
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCP 1266 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~ 1266 (1429)
++++|||||.-|+.++.-+++.+.+
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~ 27 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPD 27 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTT
T ss_pred CcEEEECCCHHHHHHHHHHhccCcC
Confidence 5799999999999999888876633
No 416
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=47.06 E-value=33 Score=43.12 Aligned_cols=26 Identities=4% Similarity=0.010 Sum_probs=23.7
Q ss_pred CceEEEccccccccHHHHHHhCCCCc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
-.++|||||..||+.|...++.|++|
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kV 53 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKT 53 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCE
Confidence 36999999999999999999888887
No 417
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=46.54 E-value=21 Score=43.86 Aligned_cols=67 Identities=12% Similarity=0.079 Sum_probs=45.4
Q ss_pred HHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcch
Q psy12805 539 VASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGAD 618 (1429)
Q Consensus 539 vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAd 618 (1429)
.+..++++|+|+|+|+...|.+ + -.+..+..+. +.- .++.|| .|.+-|..-+...+..|||
T Consensus 285 R~~aLv~AGvD~iviD~ahGhs--------~----~v~~~i~~ik----~~~--p~~~vi-aGNVaT~e~a~~Li~aGAD 345 (556)
T 4af0_A 285 RLKLLAEAGLDVVVLDSSQGNS--------V----YQIEFIKWIK----QTY--PKIDVI-AGNVVTREQAAQLIAAGAD 345 (556)
T ss_dssp HHHHHHHTTCCEEEECCSCCCS--------H----HHHHHHHHHH----HHC--TTSEEE-EEEECSHHHHHHHHHHTCS
T ss_pred HHHHHHhcCCcEEEEecccccc--------H----HHHHHHHHHH----hhC--CcceEE-eccccCHHHHHHHHHcCCC
Confidence 5667899999999999887763 0 1122333332 221 356666 4899999888778899999
Q ss_pred hhhcch
Q psy12805 619 EIGLST 624 (1429)
Q Consensus 619 avg~gt 624 (1429)
+|=+|-
T Consensus 346 ~vkVGi 351 (556)
T 4af0_A 346 GLRIGM 351 (556)
T ss_dssp EEEECS
T ss_pred EEeecC
Confidence 875443
No 418
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=46.34 E-value=33 Score=42.34 Aligned_cols=57 Identities=11% Similarity=0.135 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeC-------CC-------eeEEEecEEEEeccccC
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVP-------NS-------EKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~-------gs-------e~~ieaDlVLlAiG~~p 1340 (1429)
++.+.+.+.+++.| +..+.++..+.. +++|.+..+... |+ ..++.+|.||.|.|...
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~--~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILF--HEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEE--CTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEE--cCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 45566677677766 566888888865 234554322222 22 14799999999999874
No 419
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=45.53 E-value=35 Score=42.94 Aligned_cols=26 Identities=12% Similarity=0.158 Sum_probs=23.9
Q ss_pred CceEEEccccccccHHHHHHhCCCCc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
-.++|||||..||+.|..+++.|++|
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kV 47 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHC 47 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcE
Confidence 36999999999999999999989888
No 420
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=45.49 E-value=18 Score=43.98 Aligned_cols=27 Identities=4% Similarity=-0.082 Sum_probs=21.3
Q ss_pred CCceEEEccccccccHHHHHHhCCCCc
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
.++|+|+|||+-|+.++.-+...+.+|
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~V 68 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNV 68 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcE
Confidence 357999999999888777666667776
No 421
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=45.04 E-value=95 Score=35.98 Aligned_cols=124 Identities=14% Similarity=0.062 Sum_probs=71.7
Q ss_pred CCcccccchHHHHhccCCC---CccccccCCCCC-CCCCHHHHHHHHHHHHHhCCCCeEEEEe-ccccChHHHHHHHHhc
Q psy12805 472 GELPGYKVTKDIASTRHSV---PGVGLISPPPHH-DIYSIEDLAELIYDLKCANPNARISVKL-VSEVGVGVVASGVAKG 546 (1429)
Q Consensus 472 G~lpg~KV~~~iA~~r~~~---pg~~LisP~~h~-di~siedL~qlI~~Lk~~~~~~pV~VKL-v~e~Gvg~vA~~~aka 546 (1429)
|.++...+.++|.++|... .|+.++.+.+.. +-...+.+.+.+..+.... ++++.... +....+......+.+.
T Consensus 43 ~~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 121 (369)
T 3bw2_A 43 GYKTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWY-ETELGDPDGGRDDGYDAKLAVLLDD 121 (369)
T ss_dssp TTSCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHT-TCCCCCSCSCSSTTHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHc-CCCcCcccccccccHHHHHHHHHhc
Confidence 4566777888888877643 388888875532 2223344444454444443 34432110 0011245566778899
Q ss_pred CCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 547 KAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 547 GaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
|+|+|.+... .|.. +..+.+...| +.++. .+.|..++.++...|||++.+
T Consensus 122 g~~~V~~~~g----------------~~~~----~~i~~~~~~g----~~v~~--~v~t~~~a~~a~~~GaD~i~v 171 (369)
T 3bw2_A 122 PVPVVSFHFG----------------VPDR----EVIARLRRAG----TLTLV--TATTPEEARAVEAAGADAVIA 171 (369)
T ss_dssp CCSEEEEESS----------------CCCH----HHHHHHHHTT----CEEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEeCC----------------CCcH----HHHHHHHHCC----CeEEE--ECCCHHHHHHHHHcCCCEEEE
Confidence 9999998642 1221 2223333444 34443 467889998999999998866
No 422
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=44.80 E-value=32 Score=40.87 Aligned_cols=25 Identities=8% Similarity=-0.031 Sum_probs=22.7
Q ss_pred ceEEEccccccccHHHHHHhCCCCc
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
+++|||||.-|+..+..+++.|.+|
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~V 30 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYNV 30 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeE
Confidence 5999999999999999998888887
No 423
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=44.54 E-value=13 Score=44.21 Aligned_cols=38 Identities=18% Similarity=0.186 Sum_probs=31.4
Q ss_pred cCCCCEEEeCCCCC-----CCCcHHHHHHHHHHHHHHHHHHHh
Q psy12805 1368 TTVPRVYAAGDCRR-----GQSLVVWAISEGRQAAREIDSFLM 1405 (1429)
Q Consensus 1368 TSvPgVFAAGD~a~-----g~~lvv~Ai~qGr~AA~nI~~~L~ 1405 (1429)
..+||+||||.+.+ +-....+|...|+.|++++.++.+
T Consensus 402 ~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~~ 444 (447)
T 2i0z_A 402 KFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK 444 (447)
T ss_dssp SSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 46999999998865 234679999999999999988763
No 424
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=44.49 E-value=5.6 Score=44.91 Aligned_cols=73 Identities=16% Similarity=0.134 Sum_probs=49.6
Q ss_pred ccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHH
Q psy12805 533 EVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVA 612 (1429)
Q Consensus 533 e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kA 612 (1429)
......+|....++||+.|.+-.-.+-.+ |-+ .-|.++.+. ..++|+.-..|.+..++..|
T Consensus 78 ~~dp~~~A~~y~~~GA~~IsVltd~~~f~----------Gs~--~~L~~ir~~-------v~lPVl~Kdfi~d~~qi~ea 138 (272)
T 3tsm_A 78 DFDPPALAKAYEEGGAACLSVLTDTPSFQ----------GAP--EFLTAARQA-------CSLPALRKDFLFDPYQVYEA 138 (272)
T ss_dssp SCCHHHHHHHHHHTTCSEEEEECCSTTTC----------CCH--HHHHHHHHT-------SSSCEEEESCCCSTHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCEEEEeccccccC----------CCH--HHHHHHHHh-------cCCCEEECCccCCHHHHHHH
Confidence 34667789999999999997743221111 111 123333322 25788888899999999999
Q ss_pred HHhcchhhhcch
Q psy12805 613 ALLGADEIGLST 624 (1429)
Q Consensus 613 laLGAdavg~gt 624 (1429)
..+|||+|-+.+
T Consensus 139 ~~~GAD~VlLi~ 150 (272)
T 3tsm_A 139 RSWGADCILIIM 150 (272)
T ss_dssp HHTTCSEEEEET
T ss_pred HHcCCCEEEEcc
Confidence 999999985554
No 425
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=44.43 E-value=12 Score=41.47 Aligned_cols=106 Identities=14% Similarity=0.014 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhCC-------CCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCCh-HHHHHH
Q psy12805 510 LAELIYDLKCANP-------NARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPW-ELGVAE 581 (1429)
Q Consensus 510 L~qlI~~Lk~~~~-------~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~-~laL~e 581 (1429)
+...++.+|+.++ ++.+.|=+.+..-+..+. ....++|+|.+=..+.|.|.. .+ +|. +.-+.+
T Consensus 106 ~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~--~~l~~~D~vlvMsv~pgfggq------~f-~~~~l~ki~~ 176 (237)
T 3cu2_A 106 FALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELE--PYLDQIDVIQLLTLDPRNGTK------YP-SELILDRVIQ 176 (237)
T ss_dssp HHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGT--TTTTTCSEEEEESEETTTTEE------CC-HHHHHHHHHH
T ss_pred HHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHH--HHhhcCceeeeeeeccCcCCe------ec-ChhHHHHHHH
Confidence 4556777765411 355666665443222211 122479999773222222211 11 232 233445
Q ss_pred HHHHHHhcCCCCceEEEEcCCcccHHHHHHHHH--hcchhhhcchhHH
Q psy12805 582 THQVLALNNLRSRVVLQADGQIRTGFDVVVAAL--LGADEIGLSTAPL 627 (1429)
Q Consensus 582 v~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla--LGAdavg~gt~~L 627 (1429)
+.+.+.++|+ .+.|.++|||. ...+..+.. .|||.+-+|++.+
T Consensus 177 lr~~~~~~~~--~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf 221 (237)
T 3cu2_A 177 VEKRLGNRRV--EKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALF 221 (237)
T ss_dssp HHHHHGGGGG--GCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGG
T ss_pred HHHHHHhcCC--CceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHh
Confidence 5554433332 47899999998 677888899 9999998887543
No 426
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=44.36 E-value=84 Score=34.41 Aligned_cols=106 Identities=20% Similarity=0.131 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCC-CCCCccccccccccCCChHHHHHHHHHHH
Q psy12805 508 EDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHD-GGTGASSWTGIKNAGLPWELGVAETHQVL 586 (1429)
Q Consensus 508 edL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~-GGTgaap~~~~~~~GiP~~laL~ev~q~L 586 (1429)
.++.+++...++. +.-++|- +|-......+...++++|-+-... -|||-+. + .++..-+.++|+.+
T Consensus 104 ~e~~~k~~~A~~~--GL~~ivc----Vge~~e~~~~~~~~~~iIayep~waiGtG~~v----~---t~~~d~~~~~~~~i 170 (225)
T 1hg3_A 104 ADLEAAIRRAEEV--GLMTMVC----SNNPAVSAAVAALNPDYVAVEPPELIGTGIPV----S---KAKPEVITNTVELV 170 (225)
T ss_dssp HHHHHHHHHHHHH--TCEEEEE----ESSHHHHHHHHTTCCSEEEECCTTTTTTSCCT----T---TSCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC--CCEEEEE----eCCHHHHHHHhcCCCCEEEEeChhhhccCCCC----C---CCChhHHHHHHHHH
Confidence 4578888777776 3334443 333333344566788888877654 2343110 0 12223356677665
Q ss_pred HhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 587 ALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 587 ~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
... ...+.|+.-|||+++.|+..+...|+|.+-+|.+.|-
T Consensus 171 r~~--~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~ 210 (225)
T 1hg3_A 171 KKV--NPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTK 210 (225)
T ss_dssp HHH--CTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred Hhc--cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHC
Confidence 443 2468999999999999999999999999999997775
No 427
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=44.19 E-value=9.8 Score=45.71 Aligned_cols=95 Identities=7% Similarity=-0.015 Sum_probs=53.6
Q ss_pred CceEEEccccccccHHHHHHhCC---CCc-----ccc-------ccccchhh--ccchHHHHHHHHHHhCCC--CCCcEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHG---CPL-----GNI-------IPKWNDLI--YHNNWSEALNQLLQTNNF--PAGIKT 1302 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~G---c~V-----~~i-------Lp~~d~lv--f~~e~~~al~~~Le~~G~--~~gv~v 1302 (1429)
.+++|||||..|+..+..+++.| .+| ... ++.+.... ...++.....+.+++.++ ..+.++
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~v 115 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESPV 115 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCCE
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCEE
Confidence 57999999999999988888766 666 111 11110000 001111122344555563 346666
Q ss_pred EEEEEeecCCCceEEEEeCCCeeEEEecEEEEeccccC
Q psy12805 1303 VKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1303 ~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~p 1340 (1429)
..+.. .+..+... .+++.+++.+|.||+|+|.+|
T Consensus 116 ~~i~~---~~~~v~v~-~~g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 116 QSIDY---DAKTVTAL-VDGKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp EEEET---TTTEEEEE-ETTEEEEEECSEEEECCCEEE
T ss_pred EEEEC---CCCEEEEE-eCCcEEEEECCEEEECCCCCc
Confidence 66643 22333221 134456799999999999874
No 428
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=44.19 E-value=42 Score=36.67 Aligned_cols=87 Identities=15% Similarity=0.088 Sum_probs=52.2
Q ss_pred HHHHHHhCCCCeEEE--Eec-cc--c--C-hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHH
Q psy12805 514 IYDLKCANPNARISV--KLV-SE--V--G-VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQV 585 (1429)
Q Consensus 514 I~~Lk~~~~~~pV~V--KLv-~e--~--G-vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~ 585 (1429)
|..+|+.. +.||.- |-. .. + + .-..+..+.++|||+|.++..... -| .-+.+..+.
T Consensus 61 i~~ir~~v-~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~-------------~p--~~l~~~i~~ 124 (229)
T 3q58_A 61 LRTVRPHL-SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRS-------------RP--VDIDSLLTR 124 (229)
T ss_dssp HHHHGGGC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC-------------CS--SCHHHHHHH
T ss_pred HHHHHHhc-CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccC-------------Ch--HHHHHHHHH
Confidence 56677776 789862 311 00 1 1 112345678899999998765321 12 113344444
Q ss_pred HHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 586 LALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 586 L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
+.+.| +.+++ .+.|..++.++..+|||.+++
T Consensus 125 ~~~~g----~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 125 IRLHG----LLAMA--DCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp HHHTT----CEEEE--ECSSHHHHHHHHHTTCSEEEC
T ss_pred HHHCC----CEEEE--ecCCHHHHHHHHhCCCCEEEe
Confidence 44433 33443 578999999999999998864
No 429
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=43.22 E-value=33 Score=39.53 Aligned_cols=93 Identities=18% Similarity=0.114 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcC--CcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHH
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGK--AEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLA 587 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaG--aD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~ 587 (1429)
+.++|+++++. +.|+.|.+......-..+..+.++| +++|.++-..| -|. ...+..+.++
T Consensus 83 ~~~~i~~~~~~--g~~v~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G--------------~~~--~~~~~i~~lr 144 (336)
T 1ypf_A 83 RISFIRDMQSR--GLIASISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHG--------------HSN--AVINMIQHIK 144 (336)
T ss_dssp HHHHHHHHHHT--TCCCEEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSC--------------CSH--HHHHHHHHHH
T ss_pred HHHHHHHHHhc--CCeEEEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCC--------------CcH--HHHHHHHHHH
Confidence 34456666654 4577777532211223456678889 99998864322 111 1122223332
Q ss_pred hcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcc
Q psy12805 588 LNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLS 623 (1429)
Q Consensus 588 ~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~g 623 (1429)
+. . ..+ ++..|.+.+..|+.++..+|||++-++
T Consensus 145 ~~-~-~~~-~vi~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 145 KH-L-PES-FVIAGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp HH-C-TTS-EEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred Hh-C-CCC-EEEECCcCCHHHHHHHHHcCCCEEEEe
Confidence 22 0 123 344566899999999999999988764
No 430
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=43.06 E-value=11 Score=44.51 Aligned_cols=95 Identities=12% Similarity=0.010 Sum_probs=51.9
Q ss_pred ceEEEccccccccHHHHHHhC--CCCc-----cccccc-------cc-hhhc---cchHHHHHHHHHHhCCC--CCCcEE
Q psy12805 1243 GLRIQAARCMECGVPFCQSSH--GCPL-----GNIIPK-------WN-DLIY---HNNWSEALNQLLQTNNF--PAGIKT 1302 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~--Gc~V-----~~iLp~-------~d-~lvf---~~e~~~al~~~Le~~G~--~~gv~v 1302 (1429)
+++|||||.-|+..+..+++. |.+| ...++. +. ..+. ..++.....+.+++.++ ..+.++
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 589999999999999888876 7776 111111 10 0000 11111122344555553 234555
Q ss_pred EEEEEeecCCCceEEEEe-CCCeeEEEecEEEEeccccC
Q psy12805 1303 VKVEWTKDATGRWKMDEV-PNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1303 ~~Ve~~k~~~G~~~~v~~-~gse~~ieaDlVLlAiG~~p 1340 (1429)
..+.. .+..+..... +++.+++.+|.+++|+|.+|
T Consensus 82 ~~i~~---~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 82 TNVDP---ETKTIKVKDLITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp EEEEG---GGTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred EEEEc---CCCEEEEEecCCCceEEEECCEEEEccCCCc
Confidence 55532 1233332221 23356799999999999874
No 431
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=42.20 E-value=22 Score=41.36 Aligned_cols=26 Identities=19% Similarity=0.195 Sum_probs=23.3
Q ss_pred CceEEEccccccccHHHHHHhC--CCCc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSH--GCPL 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~--Gc~V 1267 (1429)
.+++|||||.+|+-.|+.+++. |.+|
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V 64 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSL 64 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCE
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeE
Confidence 4699999999999999999887 8777
No 432
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=41.87 E-value=33 Score=40.67 Aligned_cols=25 Identities=4% Similarity=-0.109 Sum_probs=22.7
Q ss_pred ceEEEccccccccHHHHHHhCCCCc
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
+++|||||..|+..+..+++.|.+|
T Consensus 4 dvvIIGgG~aGl~aA~~l~~~g~~V 28 (468)
T 2qae_A 4 DVVVIGGGPGGYVASIKAAQLGMKT 28 (468)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeE
Confidence 5899999999999999888888888
No 433
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=41.55 E-value=98 Score=36.36 Aligned_cols=81 Identities=17% Similarity=0.195 Sum_probs=48.7
Q ss_pred CeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCc
Q psy12805 524 ARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQI 603 (1429)
Q Consensus 524 ~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGI 603 (1429)
.++.+-+.........+..+.++|+|+|.|....| -|. .+.+..+.+.+. . ..++|++ |++
T Consensus 142 ~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g--------------~~~--~~~e~i~~ir~~-~-~~~pviv-~~v 202 (404)
T 1eep_A 142 LRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHG--------------HST--RIIELIKKIKTK-Y-PNLDLIA-GNI 202 (404)
T ss_dssp BCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCC--------------SSH--HHHHHHHHHHHH-C-TTCEEEE-EEE
T ss_pred ceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCC--------------ChH--HHHHHHHHHHHH-C-CCCeEEE-cCC
Confidence 34566554322334456667889999999842211 231 122222333222 1 1467776 678
Q ss_pred ccHHHHHHHHHhcchhhhcc
Q psy12805 604 RTGFDVVVAALLGADEIGLS 623 (1429)
Q Consensus 604 rtg~Dv~kAlaLGAdavg~g 623 (1429)
.+..++.++..+|||++.+|
T Consensus 203 ~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 203 VTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp CSHHHHHHHHTTTCSEEEEC
T ss_pred CcHHHHHHHHhcCCCEEEEC
Confidence 88999999999999988763
No 434
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=41.51 E-value=28 Score=42.43 Aligned_cols=69 Identities=10% Similarity=0.123 Sum_probs=46.3
Q ss_pred hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh
Q psy12805 536 VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL 615 (1429)
Q Consensus 536 vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL 615 (1429)
....+..+.++|+|+|.|+...|.. ..+...+.++.+.. ..++|++ |.+.|..++..++.+
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g~~------------~~~~~~i~~ir~~~------p~~~Vi~-g~v~t~e~a~~l~~a 292 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHGHS------------EGVLQRIRETRAAY------PHLEIIG-GNVATAEGARALIEA 292 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTS------------HHHHHHHHHHHHHC------TTCCEEE-EEECSHHHHHHHHHH
T ss_pred hHHHHHHHHhccCceEEeccccccc------------hHHHHHHHHHHHHC------CCceEEE-cccCcHHHHHHHHHh
Confidence 3456777899999999998765431 11222333333221 1356666 779999999999999
Q ss_pred cchhhhcc
Q psy12805 616 GADEIGLS 623 (1429)
Q Consensus 616 GAdavg~g 623 (1429)
|||++-++
T Consensus 293 GaD~I~Vg 300 (496)
T 4fxs_A 293 GVSAVKVG 300 (496)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99988654
No 435
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=40.77 E-value=48 Score=33.17 Aligned_cols=74 Identities=18% Similarity=0.120 Sum_probs=52.1
Q ss_pred cccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCccc-HHH--
Q psy12805 532 SEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRT-GFD-- 608 (1429)
Q Consensus 532 ~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrt-g~D-- 608 (1429)
..+-...++..+.+.++|+|.+|...+ +....+.++.+.|.+.+++ ++.|++.|..-+ ..|
T Consensus 39 ~~~p~e~~v~~a~~~~~d~v~lS~~~~---------------~~~~~~~~~i~~l~~~g~~-~i~v~vGG~~~~~~~~~~ 102 (137)
T 1ccw_A 39 VLSPQELFIKAAIETKADAILVSSLYG---------------QGEIDCKGLRQKCDEAGLE-GILLYVGGNIVVGKQHWP 102 (137)
T ss_dssp EEECHHHHHHHHHHHTCSEEEEEECSS---------------THHHHHTTHHHHHHHTTCT-TCEEEEEESCSSSSCCHH
T ss_pred CCCCHHHHHHHHHhcCCCEEEEEecCc---------------CcHHHHHHHHHHHHhcCCC-CCEEEEECCCcCchHhhh
Confidence 344566777888889999999998863 3344566777788888877 588887776533 233
Q ss_pred --HHHHHHhcchhhh
Q psy12805 609 --VVVAALLGADEIG 621 (1429)
Q Consensus 609 --v~kAlaLGAdavg 621 (1429)
...+-.+|+|++.
T Consensus 103 ~~~~~~~~~G~d~~~ 117 (137)
T 1ccw_A 103 DVEKRFKDMGYDRVY 117 (137)
T ss_dssp HHHHHHHHTTCSEEC
T ss_pred hhHHHHHHCCCCEEE
Confidence 3447788998763
No 436
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=40.75 E-value=62 Score=36.31 Aligned_cols=78 Identities=21% Similarity=0.132 Sum_probs=55.7
Q ss_pred EeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHH
Q psy12805 529 KLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFD 608 (1429)
Q Consensus 529 KLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~D 608 (1429)
-|.+.+-...+...+.+..+|+|.+|..-+. +-.....+.++.+.|.+.|+|+++.|++-|..-+ .+
T Consensus 162 ~LG~~vp~e~iv~aa~e~~~d~VglS~l~t~------------~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~~~~-~~ 228 (262)
T 1xrs_B 162 NLGSQVANEDFIKKAVELEADVLLVSQTVTQ------------KNVHIQNMTHLIELLEAEGLRDRFVLLCGGPRIN-NE 228 (262)
T ss_dssp ECCSSBCHHHHHHHHHHTTCSEEEEECCCCT------------TSHHHHHHHHHHHHHHHTTCGGGSEEEEECTTCC-HH
T ss_pred ECCCCCCHHHHHHHHHHcCCCEEEEEeecCC------------ccchHHHHHHHHHHHHhcCCCCCCEEEEECCcCC-HH
Confidence 3455556677778888899999999987521 0115566788888999999998899987666543 44
Q ss_pred HHHHHHhcchhhh
Q psy12805 609 VVVAALLGADEIG 621 (1429)
Q Consensus 609 v~kAlaLGAdavg 621 (1429)
. +-.+|||++.
T Consensus 229 ~--a~~iGad~~~ 239 (262)
T 1xrs_B 229 I--AKELGYDAGF 239 (262)
T ss_dssp H--HHTTTCSEEE
T ss_pred H--HHHcCCeEEE
Confidence 4 5567988763
No 437
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=40.68 E-value=67 Score=37.01 Aligned_cols=70 Identities=27% Similarity=0.251 Sum_probs=36.4
Q ss_pred HHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEE-cCCcccHHHH---HHHHHhcch
Q psy12805 543 VAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQA-DGQIRTGFDV---VVAALLGAD 618 (1429)
Q Consensus 543 ~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lia-sGGIrtg~Dv---~kAlaLGAd 618 (1429)
+.+.|+|.|++-|..|- + .-+....-..-+..+... ...+++||+ .|+..|..=+ -.|-.+|||
T Consensus 64 li~~Gv~Gl~v~GtTGE---~-------~~Ls~eEr~~vi~~~ve~--~~grvpViaGvg~~st~eai~la~~A~~~Gad 131 (332)
T 2r8w_A 64 LDAAEVDSVGILGSTGI---Y-------MYLTREERRRAIEAAATI--LRGRRTLMAGIGALRTDEAVALAKDAEAAGAD 131 (332)
T ss_dssp HHHHTCSEEEESSTTTT---G-------GGSCHHHHHHHHHHHHHH--HTTSSEEEEEECCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHcCCCEEEECccccC---h-------hhCCHHHHHHHHHHHHHH--hCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 35569999999887543 2 223333221111111111 124788884 4554444222 234668999
Q ss_pred hhhcch
Q psy12805 619 EIGLST 624 (1429)
Q Consensus 619 avg~gt 624 (1429)
++-+.+
T Consensus 132 avlv~~ 137 (332)
T 2r8w_A 132 ALLLAP 137 (332)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 886554
No 438
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=40.57 E-value=35 Score=40.36 Aligned_cols=26 Identities=8% Similarity=-0.101 Sum_probs=22.6
Q ss_pred CceEEEccccccccHHHHHHhCCCCc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
.+++|||||..|+..+..+++.|.+|
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V 29 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKV 29 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeE
Confidence 36999999999999998888888877
No 439
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=40.16 E-value=1.1e+02 Score=32.08 Aligned_cols=89 Identities=19% Similarity=0.135 Sum_probs=53.1
Q ss_pred HHHHHHHHhCCCCeEEE--EeccccC-hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHh
Q psy12805 512 ELIYDLKCANPNARISV--KLVSEVG-VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLAL 588 (1429)
Q Consensus 512 qlI~~Lk~~~~~~pV~V--KLv~e~G-vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~ 588 (1429)
+.|+.||+.+|+.||.+ |+. + ..+.+..+.++|||.|++....+. ..+.++.+.+.+
T Consensus 42 ~~i~~l~~~~~~~~i~~~l~~~---di~~~~~~~a~~~Gad~v~vh~~~~~-----------------~~~~~~~~~~~~ 101 (207)
T 3ajx_A 42 SVITAVKKAHPDKIVFADMKTM---DAGELEADIAFKAGADLVTVLGSADD-----------------STIAGAVKAAQA 101 (207)
T ss_dssp HHHHHHHHHSTTSEEEEEEEEC---SCHHHHHHHHHHTTCSEEEEETTSCH-----------------HHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEEEec---CccHHHHHHHHhCCCCEEEEeccCCh-----------------HHHHHHHHHHHH
Confidence 46888888877788876 743 4 345578889999999998865321 123345555555
Q ss_pred cCCCCceEEEEcCCcccHHHHHHH-HHhcchhhhcc
Q psy12805 589 NNLRSRVVLQADGQIRTGFDVVVA-ALLGADEIGLS 623 (1429)
Q Consensus 589 ~gLR~~V~LiasGGIrtg~Dv~kA-laLGAdavg~g 623 (1429)
.|.. +- +..-...|+.+.++. ..+|+|.|++.
T Consensus 102 ~g~~--~g-v~~~s~~~p~~~~~~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 102 HNKG--VV-VDLIGIEDKATRAQEVRALGAKFVEMH 134 (207)
T ss_dssp HTCE--EE-EECTTCSSHHHHHHHHHHTTCSEEEEE
T ss_pred cCCc--eE-EEEecCCChHHHHHHHHHhCCCEEEEE
Confidence 5532 21 211133366664433 46688877443
No 440
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=39.85 E-value=16 Score=44.23 Aligned_cols=50 Identities=22% Similarity=0.223 Sum_probs=36.0
Q ss_pred CccccCCCCEEecCCCCccCCCCEEEeCCCCCCC--------CcHHHHHHHHHHHHHHHHH
Q psy12805 1350 DLTLDPRSNYSTVEKTYLTTVPRVYAAGDCRRGQ--------SLVVWAISEGRQAAREIDS 1402 (1429)
Q Consensus 1350 GLeld~~G~I~VD~~~~~TSvPgVFAAGD~a~g~--------~lvv~Ai~qGr~AA~nI~~ 1402 (1429)
||.+|.++.+. |. --+.+||+||||.|+.+. ..+-.|+--||.|++++.+
T Consensus 451 Gl~~d~~~~Vl-~~--~g~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 451 GLRTTVNSEVL-HV--SGEPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp EECBCTTCEEE-BT--TSSEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred CeeECCCCceE-CC--CCCCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 56777776554 32 136799999999987532 2456788899999998753
No 441
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=39.84 E-value=94 Score=39.87 Aligned_cols=89 Identities=12% Similarity=0.001 Sum_probs=60.1
Q ss_pred HHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCC
Q psy12805 513 LIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLR 592 (1429)
Q Consensus 513 lI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR 592 (1429)
+|..+-+.+ +..|+ -+...+....++..+.+.++|+|.||+..++ ....+.++.+.|.+.|++
T Consensus 623 iVa~~l~~~-GfeVi-~lG~~v~~eeiv~aA~e~~adiVglSsl~~~---------------~~~~~~~vi~~Lr~~G~~ 685 (762)
T 2xij_A 623 VIATGFADL-GFDVD-IGPLFQTPREVAQQAVDADVHAVGVSTLAAG---------------HKTLVPELIKELNSLGRP 685 (762)
T ss_dssp HHHHHHHHT-TCEEE-ECCTTCCHHHHHHHHHHTTCSEEEEEECSSC---------------HHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHhC-CeEEe-eCCCCCCHHHHHHHHHHcCCCEEEEeeecHH---------------HHHHHHHHHHHHHhcCCC
Confidence 344443333 44553 3444455677788888899999999987643 234478888899999987
Q ss_pred CceEEEEcCCcccHHHHHHHHHhcchhh
Q psy12805 593 SRVVLQADGQIRTGFDVVVAALLGADEI 620 (1429)
Q Consensus 593 ~~V~LiasGGIrtg~Dv~kAlaLGAdav 620 (1429)
+ +.|++ ||+.-..|...+-.+|||++
T Consensus 686 d-v~Viv-GG~~P~~d~~~l~~~GaD~~ 711 (762)
T 2xij_A 686 D-ILVMC-GGVIPPQDYEFLFEVGVSNV 711 (762)
T ss_dssp T-SEEEE-EESCCGGGHHHHHHHTCCEE
T ss_pred C-CEEEE-eCCCCcccHHHHHhCCCCEE
Confidence 5 76665 65444446666778899976
No 442
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=39.71 E-value=57 Score=35.67 Aligned_cols=88 Identities=20% Similarity=0.135 Sum_probs=52.2
Q ss_pred HHHHHHHhCCCCeEEE--Eec-cc--c---ChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHH
Q psy12805 513 LIYDLKCANPNARISV--KLV-SE--V---GVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQ 584 (1429)
Q Consensus 513 lI~~Lk~~~~~~pV~V--KLv-~e--~---Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q 584 (1429)
.|+.+|+.. +.||.- |-. .. + ..-..+..+.++|||+|.++..... -| .-+.+..+
T Consensus 60 ~i~~ir~~v-~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~-------------~p--~~l~~~i~ 123 (232)
T 3igs_A 60 NLRMTRSLV-SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQ-------------RP--VAVEALLA 123 (232)
T ss_dssp HHHHHHTTC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC-------------CS--SCHHHHHH
T ss_pred HHHHHHHhc-CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccC-------------CH--HHHHHHHH
Confidence 356777776 789842 311 00 1 1112345678899999998765321 12 11333444
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
.+.+.| +.+.+ .+.|..++.++..+|||.+++
T Consensus 124 ~~~~~g----~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 124 RIHHHH----LLTMA--DCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp HHHHTT----CEEEE--ECCSHHHHHHHHHTTCSEEEC
T ss_pred HHHHCC----CEEEE--eCCCHHHHHHHHhCCCCEEEE
Confidence 444433 33443 578999999999999998864
No 443
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=39.69 E-value=83 Score=33.68 Aligned_cols=79 Identities=19% Similarity=0.120 Sum_probs=50.5
Q ss_pred HHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcC
Q psy12805 511 AELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNN 590 (1429)
Q Consensus 511 ~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~g 590 (1429)
.+.|+.+++ ++..+..-.+. ....+..+.++|||+|+..+.+ . .+.+ .....|
T Consensus 52 ~~~i~~~~~--~~~~~gag~vl---~~d~~~~A~~~GAd~v~~~~~d---------------~----~v~~---~~~~~g 104 (207)
T 2yw3_A 52 LEALKALRK--SGLLLGAGTVR---SPKEAEAALEAGAAFLVSPGLL---------------E----EVAA---LAQARG 104 (207)
T ss_dssp HHHHHHHTT--SSCEEEEESCC---SHHHHHHHHHHTCSEEEESSCC---------------H----HHHH---HHHHHT
T ss_pred HHHHHHHhC--CCCEEEeCeEe---eHHHHHHHHHcCCCEEEcCCCC---------------H----HHHH---HHHHhC
Confidence 467777777 56666665432 3456677889999999743211 1 1222 222233
Q ss_pred CCCceEEEEcCCcccHHHHHHHHHhcchhhhc
Q psy12805 591 LRSRVVLQADGQIRTGFDVVVAALLGADEIGL 622 (1429)
Q Consensus 591 LR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~ 622 (1429)
+.++. |+.|..++.+|..+|||.+++
T Consensus 105 ----~~~i~--G~~t~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 105 ----VPYLP--GVLTPTEVERALALGLSALKF 130 (207)
T ss_dssp ----CCEEE--EECSHHHHHHHHHTTCCEEEE
T ss_pred ----CCEEe--cCCCHHHHHHHHHCCCCEEEE
Confidence 33443 488999999999999999876
No 444
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=39.63 E-value=43 Score=39.62 Aligned_cols=25 Identities=8% Similarity=-0.068 Sum_probs=22.7
Q ss_pred ceEEEccccccccHHHHHHhCCCCc
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
+++|||||..|+..+..+++.|.+|
T Consensus 5 dvvIIGaG~aGl~aA~~l~~~G~~V 29 (464)
T 2a8x_A 5 DVVVLGAGPGGYVAAIRAAQLGLST 29 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeE
Confidence 5999999999999999998888887
No 445
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=39.33 E-value=48 Score=39.29 Aligned_cols=27 Identities=4% Similarity=0.062 Sum_probs=23.4
Q ss_pred CCceEEEccccccccHHHHHHhCCCCc
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
..+++|||||..|+..+..+++.|.+|
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V 30 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQV 30 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEE
Confidence 357999999999999998888888777
No 446
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=39.28 E-value=60 Score=36.00 Aligned_cols=73 Identities=19% Similarity=0.124 Sum_probs=51.1
Q ss_pred hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh
Q psy12805 536 VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL 615 (1429)
Q Consensus 536 vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL 615 (1429)
...+|....++||+.|.+-.-++-. .|-+ .-|..+.+. ..++|+.-++|.+..++..|..+
T Consensus 67 p~~~A~~~~~~GA~~isvlt~~~~f----------~G~~--~~l~~i~~~-------v~lPvl~kdfI~d~~qi~~a~~~ 127 (254)
T 1vc4_A 67 PVEAALAYARGGARAVSVLTEPHRF----------GGSL--LDLKRVREA-------VDLPLLRKDFVVDPFMLEEARAF 127 (254)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSS----------CCCH--HHHHHHHHH-------CCSCEEEESCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEecchhhh----------ccCH--HHHHHHHHh-------cCCCEEECCcCCCHHHHHHHHHc
Confidence 4778999999999999884322211 1111 223333332 25789999999999999999999
Q ss_pred cchhhhcchhHH
Q psy12805 616 GADEIGLSTAPL 627 (1429)
Q Consensus 616 GAdavg~gt~~L 627 (1429)
|||.|-++...+
T Consensus 128 GAD~VlL~~~~l 139 (254)
T 1vc4_A 128 GASAALLIVALL 139 (254)
T ss_dssp TCSEEEEEHHHH
T ss_pred CCCEEEECccch
Confidence 999997776543
No 447
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=39.22 E-value=60 Score=34.51 Aligned_cols=80 Identities=20% Similarity=0.186 Sum_probs=55.8
Q ss_pred CCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCC
Q psy12805 523 NARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQ 602 (1429)
Q Consensus 523 ~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGG 602 (1429)
+..|.. |...+-...+...+.+.++|+|.+|.... ++...+.++.+.|.+.+++.+++|++.|.
T Consensus 116 G~~v~~-LG~~vp~~~l~~~~~~~~~d~v~lS~~~~---------------~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 116 GFTVYN-LGVDIEPGKFVEAVKKYQPDIVGMSALLT---------------TTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp TCEEEE-CCSSBCHHHHHHHHHHHCCSEEEEECCSG---------------GGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred CCEEEE-CCCCCCHHHHHHHHHHcCCCEEEEecccc---------------ccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 344432 33445566677777888999999998642 23455778888888888888899998877
Q ss_pred cccHHHHHHHHHhcchhhh
Q psy12805 603 IRTGFDVVVAALLGADEIG 621 (1429)
Q Consensus 603 Irtg~Dv~kAlaLGAdavg 621 (1429)
.-+ .+.+ -.+|||.+.
T Consensus 180 ~~~-~~~~--~~~gad~~~ 195 (210)
T 1y80_A 180 PLS-QDFA--DEIGADGYA 195 (210)
T ss_dssp TCC-HHHH--HHHTCSEEC
T ss_pred CCC-HHHH--HHcCCeEEE
Confidence 776 4554 446988664
No 448
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=38.84 E-value=1e+02 Score=35.02 Aligned_cols=90 Identities=13% Similarity=0.044 Sum_probs=48.9
Q ss_pred HHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEE-cCCcccHHHH---HHHHHhcch
Q psy12805 543 VAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQA-DGQIRTGFDV---VVAALLGAD 618 (1429)
Q Consensus 543 ~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lia-sGGIrtg~Dv---~kAlaLGAd 618 (1429)
+.+.|+|.|++-|..|- + .-+....=..-+..+.... ..+++||+ .|...|..=+ -.|-.+|||
T Consensus 41 li~~Gv~Gl~v~GtTGE---~-------~~Ls~eEr~~v~~~~~~~~--~grvpViaGvg~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 41 NIQQGIDGLYVGGSTGE---A-------FVQSLSEREQVLEIVAEEA--KGKIKLIAHVGCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp HHHTTCSEEEESSTTTT---G-------GGSCHHHHHHHHHHHHHHH--TTTSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHcCCCEEEECeeccC---h-------hhCCHHHHHHHHHHHHHHh--CCCCcEEEecCCCCHHHHHHHHHHHHhCCCC
Confidence 45679999999887443 2 2233332221111111111 24788885 4544444222 234668999
Q ss_pred hhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCcHHHHHHHHHHHHH
Q psy12805 619 EIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEHVINYLFMLAE 674 (1429)
Q Consensus 619 avg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~~~l~~ 674 (1429)
++-+-++.|. ....+.+.+||+.+++
T Consensus 109 avlv~~P~y~------------------------------~~s~~~l~~~f~~va~ 134 (303)
T 2wkj_A 109 AVSAVTPFYY------------------------------PFSFEEHCDHYRAIID 134 (303)
T ss_dssp EEEEECCCSS------------------------------CCCHHHHHHHHHHHHH
T ss_pred EEEecCCCCC------------------------------CCCHHHHHHHHHHHHH
Confidence 8855543222 2356888899987754
No 449
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=38.22 E-value=81 Score=35.82 Aligned_cols=69 Identities=22% Similarity=0.180 Sum_probs=37.3
Q ss_pred HHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEc-CCcccHHHH----HHHHHhcc
Q psy12805 543 VAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQAD-GQIRTGFDV----VVAALLGA 617 (1429)
Q Consensus 543 ~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lias-GGIrtg~Dv----~kAlaLGA 617 (1429)
+.+.|+|.|++-|..|- . .-+....=..-+..+.... ..+++|++. |+..| .|+ -.|-.+||
T Consensus 45 li~~Gv~gi~v~GttGE---~-------~~Lt~~Er~~v~~~~~~~~--~grvpviaGvg~~~t-~~ai~la~~a~~~Ga 111 (304)
T 3l21_A 45 LVDQGCDGLVVSGTTGE---S-------PTTTDGEKIELLRAVLEAV--GDRARVIAGAGTYDT-AHSIRLAKACAAEGA 111 (304)
T ss_dssp HHHTTCSEEEESSTTTT---G-------GGSCHHHHHHHHHHHHHHH--TTTSEEEEECCCSCH-HHHHHHHHHHHHHTC
T ss_pred HHHcCCCEEEeCccccc---h-------hhCCHHHHHHHHHHHHHHh--CCCCeEEEeCCCCCH-HHHHHHHHHHHHcCC
Confidence 45679999999887543 2 2234332222221122111 347888864 44444 343 34466899
Q ss_pred hhhhcch
Q psy12805 618 DEIGLST 624 (1429)
Q Consensus 618 davg~gt 624 (1429)
|++-+-+
T Consensus 112 davlv~~ 118 (304)
T 3l21_A 112 HGLLVVT 118 (304)
T ss_dssp SEEEEEC
T ss_pred CEEEECC
Confidence 9885544
No 450
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=37.63 E-value=87 Score=39.97 Aligned_cols=75 Identities=16% Similarity=0.010 Sum_probs=53.7
Q ss_pred eccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHH
Q psy12805 530 LVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDV 609 (1429)
Q Consensus 530 Lv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv 609 (1429)
+...+....++..+.+.++|+|.||+..+. ....+.++.+.|.+.|+++ +.|++ ||+.-..|.
T Consensus 630 lG~~v~~eeiv~aA~e~~adiVglSsl~~~---------------~~~~~~~vi~~L~~~G~~~-i~Viv-GG~~p~~d~ 692 (727)
T 1req_A 630 GPLFQTPEETARQAVEADVHVVGVSSLAGG---------------HLTLVPALRKELDKLGRPD-ILITV-GGVIPEQDF 692 (727)
T ss_dssp CCTTBCHHHHHHHHHHTTCSEEEEEECSSC---------------HHHHHHHHHHHHHHTTCTT-SEEEE-EESCCGGGH
T ss_pred CCCCCCHHHHHHHHHHcCCCEEEEeeecHh---------------HHHHHHHHHHHHHhcCCCC-CEEEE-cCCCccccH
Confidence 444445566777788889999999987643 3344788888999999875 76665 554445567
Q ss_pred HHHHHhcchhhh
Q psy12805 610 VVAALLGADEIG 621 (1429)
Q Consensus 610 ~kAlaLGAdavg 621 (1429)
..+-.+|||++-
T Consensus 693 ~~l~~~GaD~~f 704 (727)
T 1req_A 693 DELRKDGAVEIY 704 (727)
T ss_dssp HHHHHTTEEEEE
T ss_pred HHHHhCCCCEEE
Confidence 777889999773
No 451
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=37.19 E-value=31 Score=39.21 Aligned_cols=25 Identities=16% Similarity=0.089 Sum_probs=22.6
Q ss_pred ceEEEccccccccHHHHHHhCCCCc
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
+|+|||||..|+-+|.++++.|.+|
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v 27 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKV 27 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCE
Confidence 5899999999999999999888776
No 452
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=37.01 E-value=72 Score=39.32 Aligned_cols=94 Identities=15% Similarity=0.028 Sum_probs=56.8
Q ss_pred CCCeEEEEeccccChHHHHHHHHhcC---CcEEEEecCCCCCCccccccccccC-CC-hHHHHHHHHHHHHhcCCCCceE
Q psy12805 522 PNARISVKLVSEVGVGVVASGVAKGK---AEHIVISGHDGGTGASSWTGIKNAG-LP-WELGVAETHQVLALNNLRSRVV 596 (1429)
Q Consensus 522 ~~~pV~VKLv~e~Gvg~vA~~~akaG---aD~I~IsG~~GGTgaap~~~~~~~G-iP-~~laL~ev~q~L~~~gLR~~V~ 596 (1429)
++..|++-.- .. ..+..+.+.| +|+|.++-..-+. +..... .| -...+.++.+.+...+ ..+++
T Consensus 107 ~~~iiG~S~h---t~-eea~~A~~~G~~~aDYv~~Gpvf~T~------tK~~~~~~~~G~~~l~~i~~~~~~~~-~~~iP 175 (540)
T 3nl6_A 107 PDMVIGWSVG---FP-EEVDELSKMGPDMVDYIGVGTLFPTL------TKKNPKKAPMGTAGAIRVLDALERNN-AHWCR 175 (540)
T ss_dssp TTSEEEEEEC---SH-HHHHHHHHTCC--CCEEEESCCSCCC------CCC----CCCHHHHHHHHHHHHHHTT-CTTCE
T ss_pred CCCEEEEECC---CH-HHHHHHHHcCCCCCCEEEEcCCCCCC------CCCCcCCCCCCHHHHHHHHHHHHhhc-cCCCC
Confidence 3555655532 23 3456678889 9999985432210 111111 11 2445566655553321 13689
Q ss_pred EEEcCCcccHHHHHHHHH--------hcchhhhcchhHH
Q psy12805 597 LQADGQIRTGFDVVVAAL--------LGADEIGLSTAPL 627 (1429)
Q Consensus 597 LiasGGIrtg~Dv~kAla--------LGAdavg~gt~~L 627 (1429)
+++.||| +..++...+. .||+.|.++++.+
T Consensus 176 vvAIGGI-~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~ 213 (540)
T 3nl6_A 176 TVGIGGL-HPDNIERVLYQCVSSNGKRSLDGICVVSDII 213 (540)
T ss_dssp EEEESSC-CTTTHHHHHHHCBCTTSSCBCSCEEESHHHH
T ss_pred EEEEcCC-CHHHHHHHHHhhcccccccCceEEEEeHHHh
Confidence 9999999 7888888876 7999998888655
No 453
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=36.45 E-value=98 Score=34.95 Aligned_cols=69 Identities=28% Similarity=0.183 Sum_probs=36.7
Q ss_pred HHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEc-CCcccHHHH----HHHHHhcc
Q psy12805 543 VAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQAD-GQIRTGFDV----VVAALLGA 617 (1429)
Q Consensus 543 ~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lias-GGIrtg~Dv----~kAlaLGA 617 (1429)
+.+.|+|.|++-|..|- + .-+....=..-+..+.... ..+++|++. |+..|. |+ -.|-.+||
T Consensus 37 li~~Gv~gl~~~GttGE---~-------~~Ls~~Er~~v~~~~~~~~--~grvpviaGvg~~~t~-~ai~la~~a~~~Ga 103 (297)
T 3flu_A 37 HIENGTDGIVAVGTTGE---S-------ATLSVEEHTAVIEAVVKHV--AKRVPVIAGTGANNTV-EAIALSQAAEKAGA 103 (297)
T ss_dssp HHHTTCCEEEESSTTTT---G-------GGSCHHHHHHHHHHHHHHH--TTSSCEEEECCCSSHH-HHHHHHHHHHHTTC
T ss_pred HHHcCCCEEEeCccccC---c-------ccCCHHHHHHHHHHHHHHh--CCCCcEEEeCCCcCHH-HHHHHHHHHHHcCC
Confidence 45689999999887543 2 1233332211111111111 246888854 444444 33 34567899
Q ss_pred hhhhcch
Q psy12805 618 DEIGLST 624 (1429)
Q Consensus 618 davg~gt 624 (1429)
|++-+-+
T Consensus 104 davlv~~ 110 (297)
T 3flu_A 104 DYTLSVV 110 (297)
T ss_dssp SEEEEEC
T ss_pred CEEEECC
Confidence 9885554
No 454
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=36.40 E-value=25 Score=41.70 Aligned_cols=26 Identities=8% Similarity=-0.083 Sum_probs=23.0
Q ss_pred CceEEEccccccccHHHHHHhCCCCc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
.+++|||||..|+..+..+++.|.+|
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~g~~V 32 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQLGFKT 32 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeE
Confidence 56999999999999998888878877
No 455
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=36.31 E-value=23 Score=42.10 Aligned_cols=44 Identities=18% Similarity=0.153 Sum_probs=29.0
Q ss_pred CccCCCCEEEeCCCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCC
Q psy12805 1366 YLTTVPRVYAAGDCRRGQSLVVWAISEGRQAAREIDSFLMGTST 1409 (1429)
Q Consensus 1366 ~~TSvPgVFAAGD~a~g~~lvv~Ai~qGr~AA~nI~~~L~g~~~ 1409 (1429)
..|.+||+|.|||-+....-+.-|+..|+.||+.|.+.|.|-+.
T Consensus 453 ~~t~i~gLyl~G~~t~pG~Gv~ga~~SG~~aA~~il~dL~gG~~ 496 (501)
T 4dgk_A 453 RDKTITNLYLVGAGTHPGAGIPGVIGSAKATAGLMLEDLIGGSH 496 (501)
T ss_dssp ---CCTTEEECCCH------HHHHHHHHHHHHHHHHHHHC----
T ss_pred CCCCCCCEEEECCCCCCcccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 45789999999997653345778889999999999999987654
No 456
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=36.28 E-value=1.2e+02 Score=36.93 Aligned_cols=96 Identities=13% Similarity=0.043 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhCCCCeEEEEeccccCh---H-HHHHHHHh-----cCCcEEEEecCCCCCCccccccccccCCChHHHHH
Q psy12805 510 LAELIYDLKCANPNARISVKLVSEVGV---G-VVASGVAK-----GKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVA 580 (1429)
Q Consensus 510 L~qlI~~Lk~~~~~~pV~VKLv~e~Gv---g-~vA~~~ak-----aGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ 580 (1429)
..+-+...++..|. +.|= +-..+. + ..|..+++ .|+|.|.+|..+ |. ....
T Consensus 214 ~~~A~~~~~~~~p~--~~vl-vDT~d~l~~gv~~al~~~~~l~~~~~~~gIRlDSgd----------------~~-~l~~ 273 (494)
T 2f7f_A 214 DYEAFMAYAKTHRD--CVFL-VDTYDTLKAGVPSAIRVAREMGDKINFLGVRIDSGD----------------MA-YISK 273 (494)
T ss_dssp HHHHHHHHHHHCSE--EEEE-CCSSCTTTTHHHHHHHHHHHHGGGSEEEEEEECSSC----------------HH-HHHH
T ss_pred HHHHHHHHHHHCCC--EEEE-EccchHhhhhHHHHHHHHHHhhhhcCCeEEEcCCCC----------------HH-HHHH
Confidence 44556667777765 3332 222232 1 12333333 689999998632 22 2236
Q ss_pred HHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcch--hhhcchhHH
Q psy12805 581 ETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGAD--EIGLSTAPL 627 (1429)
Q Consensus 581 ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAd--avg~gt~~L 627 (1429)
++.+.|...|.. ++.|++||||. ...+......|++ .+|+||...
T Consensus 274 ~~r~~ld~~G~~-~~kI~aSggld-~~~i~~l~~~G~~~~sfGvGT~Lt 320 (494)
T 2f7f_A 274 RVREQLDEAGFT-EAKIYASNDLD-ENTILNLKMQKSKIDVWGVGTKLI 320 (494)
T ss_dssp HHHHHHHHTTCT-TCEEEECSSCC-HHHHHHHHHTTCCCCEEEECHHHH
T ss_pred HHHHHHHhCCCC-ceEEEEECCCC-HHHHHHHHHcCCCEEEEecCcccc
Confidence 677778888876 68899999995 6667666778985 566666444
No 457
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=36.17 E-value=67 Score=36.96 Aligned_cols=60 Identities=17% Similarity=0.124 Sum_probs=43.5
Q ss_pred CCCCHHHHHHHHHHHHHhCCC---CeEEEEeccccChHH-HHHHHHhcCCcEEEEe--cCCCCCCc
Q psy12805 503 DIYSIEDLAELIYDLKCANPN---ARISVKLVSEVGVGV-VASGVAKGKAEHIVIS--GHDGGTGA 562 (1429)
Q Consensus 503 di~siedL~qlI~~Lk~~~~~---~pV~VKLv~e~Gvg~-vA~~~akaGaD~I~Is--G~~GGTga 562 (1429)
...+++++.++|..||+..|. .||.+=.=-..|.+. -+..+.++|++.|..+ |.++++|.
T Consensus 175 G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~GlGer~GN 240 (325)
T 3eeg_A 175 GYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTINGIGERAGN 240 (325)
T ss_dssp SCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEBGGGCCSTTCC
T ss_pred CCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEecccccccccc
Confidence 356789999999999999875 778776544456665 3345678999999876 55555443
No 458
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=36.03 E-value=2e+02 Score=32.45 Aligned_cols=111 Identities=14% Similarity=0.083 Sum_probs=55.1
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCCh
Q psy12805 496 ISPPPHHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPW 575 (1429)
Q Consensus 496 isP~~h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~ 575 (1429)
++++..+.-.++.+|+++. +. +.||.+= .+=-...|+.+.++|+|+| ++|... ++..+-..+...++.
T Consensus 7 ~~~~~~~~~~t~~~lr~~~----~~--g~~i~m~---tayDa~sA~l~e~aG~d~i-lvGdSl--~~~~lG~~dt~~vtl 74 (275)
T 3vav_A 7 YLQESSRPAVTVPKLQAMR----EA--GEKIAML---TCYDASFAALLDRANVDVQ-LIGDSL--GNVLQGQTTTLPVTL 74 (275)
T ss_dssp ------CCCCCHHHHHHHH----HH--TCCEEEE---ECCSHHHHHHHHHTTCSEE-EECTTH--HHHTTCCSSSTTCCH
T ss_pred ccCccccCCcCHHHHHHHH----HC--CCcEEEE---eCcCHHHHHHHHHcCCCEE-EECcHH--HHHHcCCCCCCccCH
Confidence 3343333344677666543 32 3455544 2223345777889999999 555432 222111222334455
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEc---CCcccHHHHH----HHHHhcchhhh
Q psy12805 576 ELGVAETHQVLALNNLRSRVVLQAD---GQIRTGFDVV----VAALLGADEIG 621 (1429)
Q Consensus 576 ~laL~ev~q~L~~~gLR~~V~Lias---GGIrtg~Dv~----kAlaLGAdavg 621 (1429)
..-+..+... ..+. .+++|++| |+..++.+++ +.+..||++|-
T Consensus 75 dem~~h~~aV--~r~~-~~~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVk 124 (275)
T 3vav_A 75 DDIAYHTACV--ARAQ-PRALIVADLPFGTYGTPADAFASAVKLMRAGAQMVK 124 (275)
T ss_dssp HHHHHHHHHH--HHTC-CSSEEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHH--HhcC-CCCCEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 4444444332 2332 24778877 5566777764 34555776663
No 459
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=35.75 E-value=31 Score=41.25 Aligned_cols=25 Identities=8% Similarity=-0.049 Sum_probs=21.2
Q ss_pred ceEEEccccccccHHHHHHhCCCCc
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
.++|||||.-|+..+..+++.|.+|
T Consensus 8 DvvVIG~G~aGl~aA~~la~~G~~V 32 (488)
T 3dgz_A 8 DLLVIGGGSGGLACAKEAAQLGKKV 32 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeE
Confidence 5899999999888888888888777
No 460
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=35.74 E-value=1.1e+02 Score=34.61 Aligned_cols=73 Identities=21% Similarity=0.164 Sum_probs=38.1
Q ss_pred HHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEE-cCCcccHHHH---HHHHHh
Q psy12805 540 ASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQA-DGQIRTGFDV---VVAALL 615 (1429)
Q Consensus 540 A~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lia-sGGIrtg~Dv---~kAlaL 615 (1429)
..-+.+.|+|.|++-|..|- ++ -+....=..-+ +..++. ...+++|++ .|+..|..=+ -.|-.+
T Consensus 27 v~~li~~Gv~gl~~~GttGE---~~-------~Ls~~Er~~v~-~~~~~~-~~grvpviaGvg~~~t~~ai~la~~A~~~ 94 (294)
T 2ehh_A 27 IEFHVDNGTDAILVCGTTGE---SP-------TLTFEEHEKVI-EFAVKR-AAGRIKVIAGTGGNATHEAVHLTAHAKEV 94 (294)
T ss_dssp HHHHHTTTCCEEEESSTTTT---GG-------GSCHHHHHHHH-HHHHHH-HTTSSEEEEECCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCEEEECccccC---hh-------hCCHHHHHHHH-HHHHHH-hCCCCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 34456789999999887443 22 23332221111 111111 134788885 4554444222 234678
Q ss_pred cchhhhcch
Q psy12805 616 GADEIGLST 624 (1429)
Q Consensus 616 GAdavg~gt 624 (1429)
|||++-+-+
T Consensus 95 Gadavlv~~ 103 (294)
T 2ehh_A 95 GADGALVVV 103 (294)
T ss_dssp TCSEEEEEC
T ss_pred CCCEEEECC
Confidence 999886554
No 461
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=35.71 E-value=41 Score=38.11 Aligned_cols=58 Identities=14% Similarity=0.095 Sum_probs=42.9
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHH-HHHHHHhcCCcEEEEe--cCCC
Q psy12805 501 HHDIYSIEDLAELIYDLKCANPNARISVKLVSEVGVGV-VASGVAKGKAEHIVIS--GHDG 558 (1429)
Q Consensus 501 h~di~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~-vA~~~akaGaD~I~Is--G~~G 558 (1429)
.+...++++..++++.|++..|+.||.+=.=-..|.+. -+..+.++|++.|..+ |.++
T Consensus 181 T~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~tv~GlG~ 241 (302)
T 2ftp_A 181 TIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGG 241 (302)
T ss_dssp SSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCB
T ss_pred CCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEecccccCC
Confidence 34456789999999999998877888887533456655 3455789999999876 5544
No 462
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=35.61 E-value=1.2e+02 Score=34.37 Aligned_cols=69 Identities=22% Similarity=0.195 Sum_probs=36.4
Q ss_pred HHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEE-cCCcccHHHH----HHHHHhcc
Q psy12805 543 VAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQA-DGQIRTGFDV----VVAALLGA 617 (1429)
Q Consensus 543 ~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lia-sGGIrtg~Dv----~kAlaLGA 617 (1429)
+.+.|+|.|++-|..|- + .-+....=..-+ +..++. ...+++||+ .|+..|. |+ -.|-.+||
T Consensus 46 li~~Gv~gl~v~GttGE---~-------~~Ls~~Er~~v~-~~~~~~-~~grvpviaGvg~~st~-~ai~la~~A~~~Ga 112 (304)
T 3cpr_A 46 LVDKGLDSLVLAGTTGE---S-------PTTTAAEKLELL-KAVREE-VGDRAKLIAGVGTNNTR-TSVELAEAAASAGA 112 (304)
T ss_dssp HHHTTCCEEEESSTTTT---T-------TTSCHHHHHHHH-HHHHHH-HTTTSEEEEECCCSCHH-HHHHHHHHHHHTTC
T ss_pred HHHcCCCEEEECccccC---h-------hhCCHHHHHHHH-HHHHHH-hCCCCcEEecCCCCCHH-HHHHHHHHHHhcCC
Confidence 45679999999887543 2 123332221111 111111 134788885 4554444 33 23467899
Q ss_pred hhhhcch
Q psy12805 618 DEIGLST 624 (1429)
Q Consensus 618 davg~gt 624 (1429)
|++-+-+
T Consensus 113 davlv~~ 119 (304)
T 3cpr_A 113 DGLLVVT 119 (304)
T ss_dssp SEEEEEC
T ss_pred CEEEECC
Confidence 9885554
No 463
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=35.51 E-value=1.2e+02 Score=34.12 Aligned_cols=73 Identities=25% Similarity=0.170 Sum_probs=37.9
Q ss_pred HHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEE-cCCcccHHHH---HHHHHh
Q psy12805 540 ASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQA-DGQIRTGFDV---VVAALL 615 (1429)
Q Consensus 540 A~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lia-sGGIrtg~Dv---~kAlaL 615 (1429)
..-+.++|+|.|++-|..|- ++ -+....=..-+ +..++. ...+++|++ .|+..|..=+ -.|-.+
T Consensus 27 v~~li~~Gv~gl~~~GttGE---~~-------~Ls~~Er~~v~-~~~~~~-~~gr~pviaGvg~~~t~~ai~la~~a~~~ 94 (289)
T 2yxg_A 27 INFLIENGVSGIVAVGTTGE---SP-------TLSHEEHKKVI-EKVVDV-VNGRVQVIAGAGSNCTEEAIELSVFAEDV 94 (289)
T ss_dssp HHHHHHTTCSEEEESSTTTT---GG-------GSCHHHHHHHH-HHHHHH-HTTSSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEECccccC---hh-------hCCHHHHHHHH-HHHHHH-hCCCCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 34456789999999887443 22 13332221111 111111 124788884 4554444222 234678
Q ss_pred cchhhhcch
Q psy12805 616 GADEIGLST 624 (1429)
Q Consensus 616 GAdavg~gt 624 (1429)
|||++-+-+
T Consensus 95 Gadavlv~~ 103 (289)
T 2yxg_A 95 GADAVLSIT 103 (289)
T ss_dssp TCSEEEEEC
T ss_pred CCCEEEECC
Confidence 999886554
No 464
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=35.49 E-value=17 Score=42.98 Aligned_cols=39 Identities=28% Similarity=0.515 Sum_probs=29.5
Q ss_pred ecCCCCcc-CCCCEEEeCCCCC-----CCCcHHHHHHHHHHHHHH
Q psy12805 1361 TVEKTYLT-TVPRVYAAGDCRR-----GQSLVVWAISEGRQAARE 1399 (1429)
Q Consensus 1361 VD~~~~~T-SvPgVFAAGD~a~-----g~~lvv~Ai~qGr~AA~n 1399 (1429)
+|+.+|++ .+||+|+||.+.+ +-...+||...|..|++.
T Consensus 372 i~~~tmesk~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 372 LDSRTMQAKEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp BCTTTCBBTTSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred CChhhccccCCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 34445655 7899999997653 456789999999988875
No 465
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=34.90 E-value=87 Score=35.30 Aligned_cols=93 Identities=20% Similarity=0.175 Sum_probs=50.0
Q ss_pred HHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHH----HHHHHhc
Q psy12805 541 SGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDV----VVAALLG 616 (1429)
Q Consensus 541 ~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv----~kAlaLG 616 (1429)
.-+.++|+|.|++-|..|- .+ -+....=..-+..+.... ..+++||+.-|--+-.|+ -.|-.+|
T Consensus 30 ~~li~~Gv~gl~v~GttGE---~~-------~Lt~~Er~~v~~~~~~~~--~grvpviaGvg~~~t~~ai~la~~a~~~G 97 (292)
T 3daq_A 30 NFLLENNAQAIIVNGTTAE---SP-------TLTTDEKELILKTVIDLV--DKRVPVIAGTGTNDTEKSIQASIQAKALG 97 (292)
T ss_dssp HHHHHTTCCEEEESSGGGT---GG-------GSCHHHHHHHHHHHHHHH--TTSSCEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCEEEECccccc---cc-------cCCHHHHHHHHHHHHHHh--CCCCcEEEeCCcccHHHHHHHHHHHHHcC
Confidence 3456789999999887443 21 133322111111111111 347888864333333443 2346689
Q ss_pred chhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCcHHHHHHHHHHHHHH
Q psy12805 617 ADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEHVINYLFMLAEE 675 (1429)
Q Consensus 617 Adavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~~~l~~e 675 (1429)
||++-+-++.|. ....+.+.+||+.+++.
T Consensus 98 adavlv~~P~y~------------------------------~~~~~~l~~~f~~ia~a 126 (292)
T 3daq_A 98 ADAIMLITPYYN------------------------------KTNQRGLVKHFEAIADA 126 (292)
T ss_dssp CSEEEEECCCSS------------------------------CCCHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCC------------------------------CCCHHHHHHHHHHHHHh
Confidence 998855543222 23457888999877653
No 466
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=34.67 E-value=53 Score=41.91 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=45.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHH-HHHHHHhcCCcEEEEe--cCCCCCCcc
Q psy12805 504 IYSIEDLAELIYDLKCANPNARISVKLVSEVGVGV-VASGVAKGKAEHIVIS--GHDGGTGAS 563 (1429)
Q Consensus 504 i~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~-vA~~~akaGaD~I~Is--G~~GGTgaa 563 (1429)
...++++.++|..||+..|+.||.+=.=-..|.+. -+..++++|||.|..+ |.++++|.+
T Consensus 286 ~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGertGN~ 348 (718)
T 3bg3_A 286 LLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGMTSQP 348 (718)
T ss_dssp CCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSCC
T ss_pred CcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEEecCcccccccCch
Confidence 45679999999999999888888887544456665 3355789999999854 666666554
No 467
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=34.61 E-value=1e+02 Score=34.85 Aligned_cols=71 Identities=27% Similarity=0.323 Sum_probs=37.0
Q ss_pred HHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEE-cCCcccHHHH--H-HHHHhcch
Q psy12805 543 VAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQA-DGQIRTGFDV--V-VAALLGAD 618 (1429)
Q Consensus 543 ~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lia-sGGIrtg~Dv--~-kAlaLGAd 618 (1429)
+.+.|+|.|++-|..|- + .-+....=..-+..+... ...+++||+ .|+..|..=+ + .|-.+|||
T Consensus 42 li~~Gv~gl~v~GtTGE---~-------~~Ls~eEr~~v~~~~~~~--~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 42 LIDNGTTAIVVGGTTGE---S-------PTLTSEEKVALYRHVVSV--VDKRVPVIAGTGSNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp HHHTTCCEEEESSTTTT---G-------GGSCHHHHHHHHHHHHHH--HTTSSCEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHcCCCEEEECccccC---h-------hhCCHHHHHHHHHHHHHH--hCCCceEEeCCCCCCHHHHHHHHHHHHhcCCC
Confidence 45679999999887543 2 223332221111111111 124688874 4554444222 2 34678999
Q ss_pred hhhcchh
Q psy12805 619 EIGLSTA 625 (1429)
Q Consensus 619 avg~gt~ 625 (1429)
++-+-++
T Consensus 110 avlv~~P 116 (301)
T 1xky_A 110 AVMLVAP 116 (301)
T ss_dssp EEEEECC
T ss_pred EEEEcCC
Confidence 8865543
No 468
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=34.37 E-value=96 Score=34.90 Aligned_cols=69 Identities=26% Similarity=0.274 Sum_probs=36.5
Q ss_pred HHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEc-CCcccHHHH----HHHHHhcc
Q psy12805 543 VAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQAD-GQIRTGFDV----VVAALLGA 617 (1429)
Q Consensus 543 ~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lias-GGIrtg~Dv----~kAlaLGA 617 (1429)
+.+.|+|.|++-|..|- ++ -+....=..-+..+.... +.+++|++- |+..| .|+ -.|-.+||
T Consensus 31 li~~Gv~gl~~~GttGE---~~-------~Ls~~Er~~v~~~~~~~~--~gr~pviaGvg~~~t-~~ai~la~~a~~~Ga 97 (291)
T 3tak_A 31 HIEQGTNSIVAVGTTGE---AS-------TLSMEEHTQVIKEIIRVA--NKRIPIIAGTGANST-REAIELTKAAKDLGA 97 (291)
T ss_dssp HHHHTCCEEEESSTTTT---GG-------GSCHHHHHHHHHHHHHHH--TTSSCEEEECCCSSH-HHHHHHHHHHHHHTC
T ss_pred HHHCCCCEEEECccccc---cc-------cCCHHHHHHHHHHHHHHh--CCCCeEEEeCCCCCH-HHHHHHHHHHHhcCC
Confidence 45679999999887543 22 233322211111111111 246888854 44444 333 24567899
Q ss_pred hhhhcch
Q psy12805 618 DEIGLST 624 (1429)
Q Consensus 618 davg~gt 624 (1429)
|++-+-+
T Consensus 98 davlv~~ 104 (291)
T 3tak_A 98 DAALLVT 104 (291)
T ss_dssp SEEEEEC
T ss_pred CEEEEcC
Confidence 9885544
No 469
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=33.90 E-value=47 Score=38.17 Aligned_cols=25 Identities=0% Similarity=-0.190 Sum_probs=20.1
Q ss_pred CCceEEEccccccccHHHHHHhCCC
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGC 1265 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc 1265 (1429)
.|+++|||||.-|+.++.-+.+.+.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~ 26 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADP 26 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCc
Confidence 4789999999999888876665553
No 470
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=33.81 E-value=36 Score=40.81 Aligned_cols=25 Identities=4% Similarity=0.015 Sum_probs=21.9
Q ss_pred ceEEEccccccccHHHHHHhC---CCCc
Q psy12805 1243 GLRIQAARCMECGVPFCQSSH---GCPL 1267 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~---Gc~V 1267 (1429)
+++|||||..|+..+..+++. |.+|
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~~~~G~~V 31 (499)
T 1xdi_A 4 RIVILGGGPAGYEAALVAATSHPETTQV 31 (499)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTTEEE
T ss_pred CEEEECCCHHHHHHHHHHHhCCCCcCEE
Confidence 589999999999999888887 8777
No 471
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=33.76 E-value=45 Score=39.50 Aligned_cols=54 Identities=11% Similarity=0.117 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHhCC--CCCCcEEEEEEEeecCCCceEEEEeCCCeeEEEecEEEEecccc
Q psy12805 1282 NWSEALNQLLQTNN--FPAGIKTVKVEWTKDATGRWKMDEVPNSEKIFKCDLVLLAMGFL 1339 (1429)
Q Consensus 1282 e~~~al~~~Le~~G--~~~gv~v~~Ve~~k~~~G~~~~v~~~gse~~ieaDlVLlAiG~~ 1339 (1429)
.+.+++.+.+++.| |.++.+|++|+.. ++++..+.+.++ +++.||.||+++...
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~---~~~~~gV~~~~g-~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETT---GNKIEAVHLEDG-RRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEE---TTEEEEEEETTS-CEEECSCEEECCC--
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEee---CCeEEEEEecCC-cEEEcCEEEECCCHH
Confidence 57788888888887 7889999999763 566655555554 479999999988643
No 472
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=33.74 E-value=1.1e+02 Score=34.56 Aligned_cols=71 Identities=23% Similarity=0.167 Sum_probs=37.7
Q ss_pred HHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCC-ceEEEEc-CCcccHHHH----HHHHH
Q psy12805 541 SGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRS-RVVLQAD-GQIRTGFDV----VVAAL 614 (1429)
Q Consensus 541 ~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~-~V~Lias-GGIrtg~Dv----~kAla 614 (1429)
.-+.+.|+|.|++-|..|- + .-+....=..-+..+.... .. +++||+. |+..|. |+ -.|-.
T Consensus 35 ~~li~~Gv~gl~v~GttGE---~-------~~Ls~~Er~~v~~~~~~~~--~g~rvpviaGvg~~~t~-~ai~la~~a~~ 101 (301)
T 3m5v_A 35 KRQIENGIDAVVPVGTTGE---S-------ATLTHEEHRTCIEIAVETC--KGTKVKVLAGAGSNATH-EAVGLAKFAKE 101 (301)
T ss_dssp HHHHHTTCCEEECSSTTTT---G-------GGSCHHHHHHHHHHHHHHH--TTSSCEEEEECCCSSHH-HHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECccccC---h-------hhCCHHHHHHHHHHHHHHh--CCCCCeEEEeCCCCCHH-HHHHHHHHHHH
Confidence 3356789999999887543 2 2233332211111111111 34 6888864 444443 33 24567
Q ss_pred hcchhhhcch
Q psy12805 615 LGADEIGLST 624 (1429)
Q Consensus 615 LGAdavg~gt 624 (1429)
+|||++-+-+
T Consensus 102 ~Gadavlv~~ 111 (301)
T 3m5v_A 102 HGADGILSVA 111 (301)
T ss_dssp TTCSEEEEEC
T ss_pred cCCCEEEEcC
Confidence 8999885554
No 473
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=33.68 E-value=2.2e+02 Score=32.66 Aligned_cols=94 Identities=16% Similarity=0.022 Sum_probs=55.1
Q ss_pred HHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCC----hHHHHHHHHHHHHhcCCC
Q psy12805 517 LKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLP----WELGVAETHQVLALNNLR 592 (1429)
Q Consensus 517 Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP----~~laL~ev~q~L~~~gLR 592 (1429)
++...++.|+++.+.........+..+.++|+|+|.|.........++ .|-| +...+.++.+..
T Consensus 110 ~~~~~~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~------~~~~~~~~~~~~i~~vr~~~------ 177 (349)
T 1p0k_A 110 VRKENPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMP------EGDRSFSGALKRIEQICSRV------ 177 (349)
T ss_dssp HHHHCSSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------------CTTHHHHHHHHHHHC------
T ss_pred hhhhCCCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCC------CCCcchHHHHHHHHHHHHHc------
Confidence 344556889998876434455566667788999998764321111111 1111 333344443321
Q ss_pred CceEEEEc--CCcccHHHHHHHHHhcchhhhcc
Q psy12805 593 SRVVLQAD--GQIRTGFDVVVAALLGADEIGLS 623 (1429)
Q Consensus 593 ~~V~Lias--GGIrtg~Dv~kAlaLGAdavg~g 623 (1429)
.++|++- |...+..++..+..+|||++-+.
T Consensus 178 -~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 178 -SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp -SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEE
T ss_pred -CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEc
Confidence 4666653 44467888888899999988664
No 474
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=33.62 E-value=55 Score=38.81 Aligned_cols=26 Identities=4% Similarity=-0.079 Sum_probs=23.2
Q ss_pred CceEEEccccccccHHHHHHhCCCCc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
.+++|||||.-|+..+..+++.|.+|
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g~~V 32 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLGFKT 32 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeE
Confidence 36999999999999999988888887
No 475
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=33.55 E-value=47 Score=39.07 Aligned_cols=60 Identities=15% Similarity=0.258 Sum_probs=43.1
Q ss_pred CCCHHHHHHHHHHHHHhC-CCCeEEEEeccccChHH-HHHHHHhcCCcEEEEe--cCCCCCCcc
Q psy12805 504 IYSIEDLAELIYDLKCAN-PNARISVKLVSEVGVGV-VASGVAKGKAEHIVIS--GHDGGTGAS 563 (1429)
Q Consensus 504 i~siedL~qlI~~Lk~~~-~~~pV~VKLv~e~Gvg~-vA~~~akaGaD~I~Is--G~~GGTgaa 563 (1429)
...|+++.++|..|++.. ++.||.+=.=-..|.+. -+..+.++||+.|..+ |.++++|.+
T Consensus 169 ~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGeraGN~ 232 (382)
T 2ztj_A 169 VATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTILGIGERNGIT 232 (382)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEccccccccccch
Confidence 346789999999999863 57888887544557665 3455789999999854 666555543
No 476
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=33.55 E-value=1.1e+02 Score=34.51 Aligned_cols=69 Identities=19% Similarity=0.189 Sum_probs=36.3
Q ss_pred HHh-cCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEc-CCcccHHHH----HHHHHhc
Q psy12805 543 VAK-GKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQAD-GQIRTGFDV----VVAALLG 616 (1429)
Q Consensus 543 ~ak-aGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lias-GGIrtg~Dv----~kAlaLG 616 (1429)
+.+ .|+|.|++-|..|- + .-+....=..-+ +..++. ...+++||+. |+..|. |+ -.|-.+|
T Consensus 33 li~~~Gv~gl~~~GttGE---~-------~~Ls~~Er~~v~-~~~~~~-~~grvpviaGvg~~~t~-~ai~la~~a~~~G 99 (293)
T 1f6k_A 33 NIDKMKVDGLYVGGSTGE---N-------FMLSTEEKKEIF-RIAKDE-AKDQIALIAQVGSVNLK-EAVELGKYATELG 99 (293)
T ss_dssp HHHTSCCSEEEESSGGGT---G-------GGSCHHHHHHHH-HHHHHH-HTTSSEEEEECCCSCHH-HHHHHHHHHHHHT
T ss_pred HHhhCCCcEEEeCccccc---h-------hhCCHHHHHHHH-HHHHHH-hCCCCeEEEecCCCCHH-HHHHHHHHHHhcC
Confidence 456 79999999877433 2 223332221111 111111 1347888854 554444 33 2346689
Q ss_pred chhhhcch
Q psy12805 617 ADEIGLST 624 (1429)
Q Consensus 617 Adavg~gt 624 (1429)
||++-+-+
T Consensus 100 adavlv~~ 107 (293)
T 1f6k_A 100 YDCLSAVT 107 (293)
T ss_dssp CSEEEEEC
T ss_pred CCEEEECC
Confidence 99886554
No 477
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=33.50 E-value=1.1e+02 Score=34.34 Aligned_cols=71 Identities=11% Similarity=-0.041 Sum_probs=38.4
Q ss_pred HHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEE-cCCcccHHHH--H-HHHHhcch
Q psy12805 543 VAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQA-DGQIRTGFDV--V-VAALLGAD 618 (1429)
Q Consensus 543 ~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lia-sGGIrtg~Dv--~-kAlaLGAd 618 (1429)
+.+.|+|.|++-|..|- + .-+....=.. +.+..++. ...+++|++ .|+..|..=+ + .|-.+|||
T Consensus 33 li~~Gv~gl~~~GttGE---~-------~~Ls~~Er~~-v~~~~~~~-~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 100 (294)
T 3b4u_A 33 CLSNGCDSVTLFGTTGE---G-------CSVGSRERQA-ILSSFIAA-GIAPSRIVTGVLVDSIEDAADQSAEALNAGAR 100 (294)
T ss_dssp HHHTTCSEEEESSTTTT---G-------GGSCHHHHHH-HHHHHHHT-TCCGGGEEEEECCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHcCCCEEEECccccC---h-------hhCCHHHHHH-HHHHHHHH-hCCCCcEEEeCCCccHHHHHHHHHHHHhcCCC
Confidence 45679999999887543 2 2233332222 22222222 345788874 4554444222 2 34668999
Q ss_pred hhhcchh
Q psy12805 619 EIGLSTA 625 (1429)
Q Consensus 619 avg~gt~ 625 (1429)
++-+-++
T Consensus 101 avlv~~P 107 (294)
T 3b4u_A 101 NILLAPP 107 (294)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 8865543
No 478
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=33.36 E-value=30 Score=37.28 Aligned_cols=81 Identities=16% Similarity=0.186 Sum_probs=0.0
Q ss_pred CcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHH
Q psy12805 548 AEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPL 627 (1429)
Q Consensus 548 aD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L 627 (1429)
+|.+.++...||||.+ ..|.+ +....+. ..+++.+||| |+..|..|+.+++..|=+.+..-
T Consensus 118 ~d~~LlD~~~gGtG~~---------fdW~~-l~~~~~~--------~~p~~LAGGL-~peNV~~ai~~~p~gVDvsSGvE 178 (203)
T 1v5x_A 118 AQALLLDGKRPGSGEA---------YPRAW-AKPLLAT--------GRRVILAGGI-APENLEEVLALRPYALDLASGVE 178 (203)
T ss_dssp CSEEEEECSSTTSCCC---------CCGGG-GHHHHHT--------TSCEEECSSC-CSTTHHHHHHHCCSEEEESGGGE
T ss_pred CCEEEEcCCCCCCCCc---------cCHHH-HHhhhcc--------CCcEEEECCC-CHHHHHHHHhcCCCEEEeCCcee
Q ss_pred HHhccccccccccCCCCccceecCHHHHhhcCCcHHHHHHHHHHHHH
Q psy12805 628 ITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEHVINYLFMLAE 674 (1429)
Q Consensus 628 ~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~~~l~~ 674 (1429)
.+-| ..+++.+..|++.+..
T Consensus 179 ~~pG---------------------------~KD~~ki~~fi~~~r~ 198 (203)
T 1v5x_A 179 EAPG---------------------------VKSAEKLRALFARLAS 198 (203)
T ss_dssp EETT---------------------------EECHHHHHHHHHHHHH
T ss_pred cCCC---------------------------CcCHHHHHHHHHHHHH
No 479
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=33.22 E-value=67 Score=37.30 Aligned_cols=50 Identities=18% Similarity=0.246 Sum_probs=34.6
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 574 PWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 574 P~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
|-+..+.++++.+..+|.+.+| +.+ .+|+..+|.. ++|+|.+=+.-..|-
T Consensus 205 ~Gv~~v~~i~~~y~~~g~~T~v-l~A--SfRn~~~v~~--laG~d~~Tipp~ll~ 254 (334)
T 3hjz_A 205 PGVISVTQIYKYFKEKGFKTEV-MGA--SFRNLDEIKE--LAGCDLLTIAPKFLE 254 (334)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEE-EEB--CCSSHHHHHH--TTTCSEEEECHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCCEE-EEe--cCCCHHHHHH--HhCCCEEEcCHHHHH
Confidence 3456678888888888887644 333 5999999976 679997643333333
No 480
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=33.09 E-value=36 Score=39.73 Aligned_cols=26 Identities=8% Similarity=-0.013 Sum_probs=22.4
Q ss_pred CCceEEEccccccccHHHHHHhCCCC
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGCP 1266 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc~ 1266 (1429)
..+++|||+|..|+..+..+++.|.+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~ 32 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQ 32 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCC
T ss_pred CCcEEEECChHHHHHHHHHHHccCCC
Confidence 35799999999999999998887764
No 481
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=32.48 E-value=87 Score=35.81 Aligned_cols=69 Identities=22% Similarity=0.145 Sum_probs=36.7
Q ss_pred HHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEc-CCcccHHHH----HHHHHhcc
Q psy12805 543 VAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQAD-GQIRTGFDV----VVAALLGA 617 (1429)
Q Consensus 543 ~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lias-GGIrtg~Dv----~kAlaLGA 617 (1429)
+.+.|+|.|++-|..|- + .-+....=..-+..+.... ..+++||+- |+..|. |+ -.|-.+||
T Consensus 52 li~~Gv~Gl~v~GtTGE---~-------~~Ls~~Er~~v~~~~v~~~--~grvpViaGvg~~st~-~ai~la~~A~~~Ga 118 (315)
T 3si9_A 52 QITQGINGVSPVGTTGE---S-------PTLTHEEHKRIIELCVEQV--AKRVPVVAGAGSNSTS-EAVELAKHAEKAGA 118 (315)
T ss_dssp HHHTTCSEEECSSTTTT---G-------GGSCHHHHHHHHHHHHHHH--TTSSCBEEECCCSSHH-HHHHHHHHHHHTTC
T ss_pred HHHcCCCEEEeCccccC---c-------cccCHHHHHHHHHHHHHHh--CCCCcEEEeCCCCCHH-HHHHHHHHHHhcCC
Confidence 45689999998887443 2 2233332221111111111 246888854 444443 33 24577899
Q ss_pred hhhhcch
Q psy12805 618 DEIGLST 624 (1429)
Q Consensus 618 davg~gt 624 (1429)
|++-+-+
T Consensus 119 davlv~~ 125 (315)
T 3si9_A 119 DAVLVVT 125 (315)
T ss_dssp SEEEEEC
T ss_pred CEEEECC
Confidence 9885554
No 482
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=32.48 E-value=73 Score=35.91 Aligned_cols=51 Identities=10% Similarity=0.020 Sum_probs=40.0
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeccccChHH-HHHHHHhcCCcEEEEe
Q psy12805 504 IYSIEDLAELIYDLKCANPNARISVKLVSEVGVGV-VASGVAKGKAEHIVIS 554 (1429)
Q Consensus 504 i~siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~-vA~~~akaGaD~I~Is 554 (1429)
..+++++.++|..|++..|..||.+=.=...|.+. -+..+.++|++.|..+
T Consensus 181 ~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~t 232 (298)
T 2cw6_A 181 VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSS 232 (298)
T ss_dssp CCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEB
T ss_pred CcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEee
Confidence 45789999999999999887889887655557654 2355789999999765
No 483
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=32.35 E-value=85 Score=35.50 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=43.0
Q ss_pred CCCHHHHHHHHHHHHHhCCC---CeEEEEeccccChHH-HHHHHHhcCCcEEEEe--cCCCCCCc
Q psy12805 504 IYSIEDLAELIYDLKCANPN---ARISVKLVSEVGVGV-VASGVAKGKAEHIVIS--GHDGGTGA 562 (1429)
Q Consensus 504 i~siedL~qlI~~Lk~~~~~---~pV~VKLv~e~Gvg~-vA~~~akaGaD~I~Is--G~~GGTga 562 (1429)
..+++++.++|..|++..|. .||.+=.=-..|.+. -+..+.++|++.|..+ |.++++|.
T Consensus 175 ~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~GlGeraGN 239 (293)
T 3ewb_X 175 YTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTINGIGERAGN 239 (293)
T ss_dssp CCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCTTTCB
T ss_pred CCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeecccccccccc
Confidence 45779999999999998874 578887554557665 3345788999999876 55555543
No 484
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=32.28 E-value=22 Score=39.41 Aligned_cols=34 Identities=21% Similarity=0.042 Sum_probs=29.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhcchhhhcchhHHH
Q psy12805 594 RVVLQADGQIRTGFDVVVAALLGADEIGLSTAPLI 628 (1429)
Q Consensus 594 ~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt~~L~ 628 (1429)
+++|++-|||+|+.++.+++. |||.|-+|+++.-
T Consensus 186 ~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~ 219 (235)
T 3w01_A 186 ETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYK 219 (235)
T ss_dssp SSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHH
T ss_pred CCCEEEECCcCCHHHHHHHHc-CCCEEEECCceec
Confidence 589999999999999987666 9999999996543
No 485
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=31.97 E-value=66 Score=42.31 Aligned_cols=95 Identities=12% Similarity=0.024 Sum_probs=53.8
Q ss_pred CceEEEccccccccHHHHHHhCCCCcc----------cccc---ccchhhccchHHHHHHHHHHhC-C--CCCCcEEEEE
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPLG----------NIIP---KWNDLIYHNNWSEALNQLLQTN-N--FPAGIKTVKV 1305 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V~----------~iLp---~~d~lvf~~e~~~al~~~Le~~-G--~~~gv~v~~V 1305 (1429)
.+++|||+|.-|+..+...++.|.+|. .+.. .+.+-....+|...+.+.+.+. + +..+.++..+
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i 208 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFGS 208 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEee
Confidence 469999999999999998888888771 1110 0000001124555555555553 4 4445555555
Q ss_pred EEeecCCCceEEEE-------e-------CCCeeEEEecEEEEeccccC
Q psy12805 1306 EWTKDATGRWKMDE-------V-------PNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1306 e~~k~~~G~~~~v~-------~-------~gse~~ieaDlVLlAiG~~p 1340 (1429)
.. ++...... + .+...++.+|.||+|+|..|
T Consensus 209 ~~----~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 209 YD----ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp ET----TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEE
T ss_pred ec----CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCcc
Confidence 21 12111110 0 02224789999999999873
No 486
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=31.96 E-value=83 Score=35.92 Aligned_cols=70 Identities=27% Similarity=0.198 Sum_probs=37.1
Q ss_pred HHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEc-CCcccHHHH----HHHHHhc
Q psy12805 542 GVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQAD-GQIRTGFDV----VVAALLG 616 (1429)
Q Consensus 542 ~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lias-GGIrtg~Dv----~kAlaLG 616 (1429)
-+.++|+|.|++-|..|- + .-+....-..-+..+.... ..+++|++- |...| .|+ -.|-.+|
T Consensus 52 ~li~~Gv~Gl~v~GtTGE---~-------~~Ls~~Er~~v~~~~v~~~--~grvpViaGvg~~st-~eai~la~~A~~~G 118 (314)
T 3qze_A 52 FHLQEGTNAIVAVGTTGE---S-------ATLDVEEHIQVIRRVVDQV--KGRIPVIAGTGANST-REAVALTEAAKSGG 118 (314)
T ss_dssp HHHHHTCCEEEESSGGGT---G-------GGCCHHHHHHHHHHHHHHH--TTSSCEEEECCCSSH-HHHHHHHHHHHHTT
T ss_pred HHHHcCCCEEEECccccC---h-------hhCCHHHHHHHHHHHHHHh--CCCCcEEEeCCCcCH-HHHHHHHHHHHHcC
Confidence 346679999999877443 2 2233332222111112121 246888854 44443 333 3446789
Q ss_pred chhhhcch
Q psy12805 617 ADEIGLST 624 (1429)
Q Consensus 617 Adavg~gt 624 (1429)
||++-+-+
T Consensus 119 adavlv~~ 126 (314)
T 3qze_A 119 ADACLLVT 126 (314)
T ss_dssp CSEEEEEC
T ss_pred CCEEEEcC
Confidence 99885554
No 487
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=31.94 E-value=91 Score=37.85 Aligned_cols=68 Identities=13% Similarity=0.084 Sum_probs=44.8
Q ss_pred hHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHh
Q psy12805 536 VGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALL 615 (1429)
Q Consensus 536 vg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL 615 (1429)
....+..+.++|+|+|.|....|.. -.+...+.++++.+ ..++|++ |++.|..++.++..+
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~------------~~~~~~i~~i~~~~------~~~pvi~-~~v~t~~~a~~l~~a 316 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNS------------VYQIAMVHYIKQKY------PHLQVIG-GNVVTAAQAKNLIDA 316 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCS------------HHHHHHHHHHHHHC------TTCEEEE-EEECSHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcc------------hhHHHHHHHHHHhC------CCCceEe-cccchHHHHHHHHHc
Confidence 4456677889999999997654431 00122233333322 1467765 678999999999999
Q ss_pred cchhhhc
Q psy12805 616 GADEIGL 622 (1429)
Q Consensus 616 GAdavg~ 622 (1429)
|||++-+
T Consensus 317 Gad~I~v 323 (514)
T 1jcn_A 317 GVDGLRV 323 (514)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9998844
No 488
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=31.89 E-value=1.2e+02 Score=33.77 Aligned_cols=89 Identities=13% Similarity=0.039 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccChHH-HHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVGVGV-VASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQ 584 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~-vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q 584 (1429)
|.+||.+ +|+.. +.||.-| ...+.. ....+..+|||+|.|...- ++- .-|.+..+
T Consensus 89 s~~dL~~----ir~~v-~lPvLrK---Dfi~~~~qi~ea~~~GAD~ilLi~a~---------------l~~-~~l~~l~~ 144 (251)
T 1i4n_A 89 DPAFVRA----ARNLT-CRPILAK---DFYIDTVQVKLASSVGADAILIIARI---------------LTA-EQIKEIYE 144 (251)
T ss_dssp CTHHHHH----HHTTC-CSCEEEE---CCCCSTHHHHHHHHTTCSEEEEEGGG---------------SCH-HHHHHHHH
T ss_pred CHHHHHH----HHHhC-CCCEEEe---eCCCCHHHHHHHHHcCCCEEEEeccc---------------CCH-HHHHHHHH
Confidence 6777654 45554 7999999 432211 2233788999999998762 121 23444445
Q ss_pred HHHhcCCCCceEEEEcCCcccHHHHHHHHHh-cchhhhcch
Q psy12805 585 VLALNNLRSRVVLQADGQIRTGFDVVVAALL-GADEIGLST 624 (1429)
Q Consensus 585 ~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaL-GAdavg~gt 624 (1429)
.....|+ -.++- +.|..++..|+.+ ||+.+|+-.
T Consensus 145 ~a~~lGl---~~lvE---v~~~eE~~~A~~l~g~~iIGinn 179 (251)
T 1i4n_A 145 AAEELGM---DSLVE---VHSREDLEKVFSVIRPKIIGINT 179 (251)
T ss_dssp HHHTTTC---EEEEE---ECSHHHHHHHHTTCCCSEEEEEC
T ss_pred HHHHcCC---eEEEE---eCCHHHHHHHHhcCCCCEEEEeC
Confidence 4444453 23443 5799999999999 999887554
No 489
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=31.65 E-value=1e+02 Score=35.63 Aligned_cols=72 Identities=21% Similarity=0.183 Sum_probs=37.8
Q ss_pred HHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEc-CCcccHHHH----HHHHHh
Q psy12805 541 SGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQAD-GQIRTGFDV----VVAALL 615 (1429)
Q Consensus 541 ~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lias-GGIrtg~Dv----~kAlaL 615 (1429)
.-+.+.|+|.|++-|..|- ++ -+....=..-+..+... ...+++||+- |+..|. |+ -.|-.+
T Consensus 59 ~~li~~Gv~Gl~v~GtTGE---~~-------~Ls~eEr~~vi~~~ve~--~~grvpViaGvg~~st~-eai~la~~A~~~ 125 (343)
T 2v9d_A 59 DDLIKAGVDGLFFLGSGGE---FS-------QLGAEERKAIARFAIDH--VDRRVPVLIGTGGTNAR-ETIELSQHAQQA 125 (343)
T ss_dssp HHHHHTTCSCEEESSTTTT---GG-------GSCHHHHHHHHHHHHHH--HTTSSCEEEECCSSCHH-HHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEeCccccC---hh-------hCCHHHHHHHHHHHHHH--hCCCCcEEEecCCCCHH-HHHHHHHHHHhc
Confidence 3356789999999887443 22 23332221111111111 1247888854 444444 33 234678
Q ss_pred cchhhhcchh
Q psy12805 616 GADEIGLSTA 625 (1429)
Q Consensus 616 GAdavg~gt~ 625 (1429)
|||++-+-++
T Consensus 126 Gadavlv~~P 135 (343)
T 2v9d_A 126 GADGIVVINP 135 (343)
T ss_dssp TCSEEEEECC
T ss_pred CCCEEEECCC
Confidence 9998865543
No 490
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=31.22 E-value=1e+02 Score=35.19 Aligned_cols=87 Identities=13% Similarity=0.021 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHHHhCCCCeEEEEeccccChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHH
Q psy12805 506 SIEDLAELIYDLKCANPNARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQV 585 (1429)
Q Consensus 506 siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~ 585 (1429)
+++++ .++++.. ..||.+|.- .+.-..++.+..+|||+|..+ .+-+ ++-+ +..++
T Consensus 66 ~~~~i----~~i~~~v-~iPvl~k~~--i~~ide~qil~aaGAD~Id~s--~~~~------------~~~l--i~~i~-- 120 (297)
T 4adt_A 66 DPLKI----EEIRKCI-SINVLAKVR--IGHFVEAQILEELKVDMLDES--EVLT------------MADE--YNHIN-- 120 (297)
T ss_dssp CHHHH----HHHHTTC-CSEEEEEEE--TTCHHHHHHHHHTTCSEEEEE--TTSC------------CSCS--SCCCC--
T ss_pred CHHHH----HHHHHhc-CCCEEEecc--CCcHHHHHHHHHcCCCEEEcC--CCCC------------HHHH--HHHHH--
Confidence 55554 4566665 799999953 233455677788999999221 1111 1100 01111
Q ss_pred HHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcc
Q psy12805 586 LALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLS 623 (1429)
Q Consensus 586 L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~g 623 (1429)
+.++ .+.+++ +++|..++..++.+||+.+++.
T Consensus 121 --~~~~--g~~vvv--~v~~~~Ea~~a~~~Gad~I~v~ 152 (297)
T 4adt_A 121 --KHKF--KTPFVC--GCTNLGEALRRISEGASMIRTK 152 (297)
T ss_dssp --GGGC--SSCEEE--EESSHHHHHHHHHHTCSEEEEC
T ss_pred --hcCC--CCeEEE--EeCCHHHHHHHHhCCCCEEEEC
Confidence 1111 244554 5899999999999999988644
No 491
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=30.82 E-value=28 Score=41.85 Aligned_cols=96 Identities=10% Similarity=-0.017 Sum_probs=49.8
Q ss_pred CCceEEEccccccccHHHHHHhCCCCcccc-----ccc-cc---hhhc--cchHHHHHHHHHH--hCC--CCCCcEEEEE
Q psy12805 1241 RKGLRIQAARCMECGVPFCQSSHGCPLGNI-----IPK-WN---DLIY--HNNWSEALNQLLQ--TNN--FPAGIKTVKV 1305 (1429)
Q Consensus 1241 pk~lvVIGaGcIgcE~a~c~s~~Gc~V~~i-----Lp~-~d---~lvf--~~e~~~al~~~Le--~~G--~~~gv~v~~V 1305 (1429)
..+++|||+|..|+..+..+++. .+|..+ +.. +. ...+ .....+.+..+.+ ..+ +..+..+..+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIYLETSALGV 186 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTCCTTEEEETTEEECCC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHHhcCCEEEcCCEEEEE
Confidence 35799999999999999988876 666111 100 00 0000 1122222222222 233 2234444444
Q ss_pred EEeecCCCceEEEE-eCCCeeEEEecEEEEeccccC
Q psy12805 1306 EWTKDATGRWKMDE-VPNSEKIFKCDLVLLAMGFLG 1340 (1429)
Q Consensus 1306 e~~k~~~G~~~~v~-~~gse~~ieaDlVLlAiG~~p 1340 (1429)
.. .+..+.... ..+....+++|.+++|+|..+
T Consensus 187 ~~---~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 187 FD---KGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp EE---CSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred Ec---CCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 32 222332222 233335799999999999874
No 492
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=30.45 E-value=3.6e+02 Score=30.59 Aligned_cols=159 Identities=13% Similarity=0.068 Sum_probs=0.0
Q ss_pred ceeecccCCCCCChh-------hhccccchhhhcccCCCCCCCCCcccccchHHHHhccCCCCccccccCCCCCCCCCHH
Q psy12805 436 AIKQVASGRFGVTSS-------YLAHADDLQIKMAQGAKPGEGGELPGYKVTKDIASTRHSVPGVGLISPPPHHDIYSIE 508 (1429)
Q Consensus 436 ~I~Q~asgrfGv~~~-------~L~~a~~ieIk~gQGAKpG~GG~lpg~KV~~~iA~~r~~~pg~~LisP~~h~di~sie 508 (1429)
+|-+.-.| ||.+++ .+..+++-=||+--+.-|-.-||+.+..+ .+.+
T Consensus 81 viaD~d~G-yg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L-------------------------~p~~ 134 (295)
T 1xg4_A 81 LLVDADIG-FGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAI-------------------------VSKE 134 (295)
T ss_dssp EEEECTTC-SSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCB-------------------------CCHH
T ss_pred EEecCCcc-cCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCcc-------------------------CCHH
Q ss_pred HHHHHHHHHHHh--CCCCeEEEEecccc-----ChHHHHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHH
Q psy12805 509 DLAELIYDLKCA--NPNARISVKLVSEV-----GVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAE 581 (1429)
Q Consensus 509 dL~qlI~~Lk~~--~~~~pV~VKLv~e~-----Gvg~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~e 581 (1429)
+..+.|..++.+ .++..|..+.-+.. ..-..|...++||||.|.+-+. |...-+.+
T Consensus 135 ~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~-----------------~~~~~~~~ 197 (295)
T 1xg4_A 135 EMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAI-----------------TELAMYRQ 197 (295)
T ss_dssp HHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEETTC-----------------CSHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCC-----------------CCHHHHHH
Q ss_pred HHHHHHhcCCCCceEE---EEcCCcccHHHHHHHHHhcchhhhcchhHHHHhccccccccccCCCCccceecCHHHHhhc
Q psy12805 582 THQVLALNNLRSRVVL---QADGQIRTGFDVVVAALLGADEIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKF 658 (1429)
Q Consensus 582 v~q~L~~~gLR~~V~L---iasGGIrtg~Dv~kAlaLGAdavg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~ 658 (1429)
+.+.+ ++|+ +..+|-.-.......-.+|.+.|-++...+.+.-
T Consensus 198 i~~~~-------~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~aa~--------------------------- 243 (295)
T 1xg4_A 198 FADAV-------QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMN--------------------------- 243 (295)
T ss_dssp HHHHH-------CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHHHHH---------------------------
T ss_pred HHHHc-------CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHHHHH---------------------------
Q ss_pred CCcHHHHHHHHHHHHHH
Q psy12805 659 AGKPEHVINYLFMLAEE 675 (1429)
Q Consensus 659 ~g~~e~v~ny~~~l~~e 675 (1429)
..+.+..+.+.++
T Consensus 244 ----~a~~~~~~~i~~~ 256 (295)
T 1xg4_A 244 ----RAAEHVYNVLRQE 256 (295)
T ss_dssp ----HHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHh
No 493
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=30.44 E-value=34 Score=40.66 Aligned_cols=25 Identities=8% Similarity=-0.093 Sum_probs=22.3
Q ss_pred ceEEEccccccccHHHHHHhCCCCc
Q psy12805 1243 GLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1243 ~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
+++|||||.-|+..|..+++.|.+|
T Consensus 5 DVvVIGgG~aGl~aA~~la~~G~~V 29 (476)
T 3lad_A 5 DVIVIGAGPGGYVAAIKSAQLGLKT 29 (476)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCE
T ss_pred CEEEECcCHHHHHHHHHHHhCCCEE
Confidence 5999999999999999888888877
No 494
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=30.32 E-value=1.6e+02 Score=33.44 Aligned_cols=146 Identities=22% Similarity=0.280 Sum_probs=77.6
Q ss_pred ccchhhhcccCCCCCCCCCcccccchHHHHhccCCCCccccccCCCCCCC-CCHHHHHHHHHHHHHhC-CCCeEEEEec-
Q psy12805 455 ADDLQIKMAQGAKPGEGGELPGYKVTKDIASTRHSVPGVGLISPPPHHDI-YSIEDLAELIYDLKCAN-PNARISVKLV- 531 (1429)
Q Consensus 455 a~~ieIk~gQGAKpG~GG~lpg~KV~~~iA~~r~~~pg~~LisP~~h~di-~siedL~qlI~~Lk~~~-~~~pV~VKLv- 531 (1429)
|+-||+- ++..+||.-|...+.+.+.+.-. -|-.-+|-| +..|| ||.+++....++++..- -++.-.|=-+
T Consensus 60 AdRIELc----~~l~~GGlTPS~g~i~~a~~~~~-ipV~vMIRP-RgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L 133 (287)
T 3iwp_A 60 ADRIELC----SGLSEGGTTPSMGVLQVVKQSVQ-IPVFVMIRP-RGGDFLYSDREIEVMKADIRLAKLYGADGLVFGAL 133 (287)
T ss_dssp CSEEEEC----BCGGGTCBCCCHHHHHHHHTTCC-SCEEEECCS-SSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCB
T ss_pred CCEEEEC----CCCCCCCCCCCHHHHHHHHHhcC-CCeEEEEec-CCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeee
Confidence 5566664 34456777787777666654322 344444555 44455 88877666555554321 0222222111
Q ss_pred -cc--cChHH---------------------------HHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHH
Q psy12805 532 -SE--VGVGV---------------------------VASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAE 581 (1429)
Q Consensus 532 -~e--~Gvg~---------------------------vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~e 581 (1429)
++ .+... ....+++.|+|-|..||.... -..|++.+-.|
T Consensus 134 ~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~---------a~~Gl~~Lk~L-- 202 (287)
T 3iwp_A 134 TEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSS---------ALEGLPLIKRL-- 202 (287)
T ss_dssp CTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSS---------TTTTHHHHHHH--
T ss_pred CCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCC---------hHHhHHHHHHH--
Confidence 11 11111 112255669999998775311 03455553332
Q ss_pred HHHHHHhcCCCCceEEEEcCCcccHHHHHHHHH-hcchhhhcch
Q psy12805 582 THQVLALNNLRSRVVLQADGQIRTGFDVVVAAL-LGADEIGLST 624 (1429)
Q Consensus 582 v~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAla-LGAdavg~gt 624 (1429)
.+. . ..++.|++.|||+.. .+...+. .||++|-++.
T Consensus 203 -v~~---a--~~rI~ImaGGGV~~~-Ni~~l~~~tG~~~~H~S~ 239 (287)
T 3iwp_A 203 -IEQ---A--KGRIVVMPGGGITDR-NLQRILEGSGATEFHCSA 239 (287)
T ss_dssp -HHH---H--TTSSEEEECTTCCTT-THHHHHHHHCCSEEEECC
T ss_pred -HHH---h--CCCCEEEECCCcCHH-HHHHHHHhhCCCEEeECc
Confidence 221 1 237999999999854 4554444 7999886554
No 495
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=29.98 E-value=2.6e+02 Score=31.91 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=63.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEEeccc--cChHH---HHHHHHhcCCcEEEEecCCCCCCccccccccccCCChHHH
Q psy12805 504 IYSIEDLAELIYDLKCANPNARISVKLVSE--VGVGV---VASGVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELG 578 (1429)
Q Consensus 504 i~siedL~qlI~~Lk~~~~~~pV~VKLv~e--~Gvg~---vA~~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~la 578 (1429)
+.++++..+.|+.++++.++..|..+.-+. .|+.. -|...++||||.|.+-+. |...-
T Consensus 140 l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~-----------------~~~~~ 202 (305)
T 3ih1_A 140 LVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEAL-----------------QSEEE 202 (305)
T ss_dssp BCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETTC-----------------CSHHH
T ss_pred ccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcCC-----------------CCHHH
Confidence 467899999999999987677777775432 13332 345578899999998653 33222
Q ss_pred HHHHHHHHHhcCCCCceEEE---EcCCcccHHHHHHHHHhcchhhhcchhHHHHh
Q psy12805 579 VAETHQVLALNNLRSRVVLQ---ADGQIRTGFDVVVAALLGADEIGLSTAPLITM 630 (1429)
Q Consensus 579 L~ev~q~L~~~gLR~~V~Li---asGGIrtg~Dv~kAlaLGAdavg~gt~~L~al 630 (1429)
+.++.+.+ +++++ ..+|-.-...+...-.+|...|-++...+.+.
T Consensus 203 ~~~i~~~~-------~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~raa 250 (305)
T 3ih1_A 203 FRLFNSKV-------NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRVA 250 (305)
T ss_dssp HHHHHHHS-------CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHHH
T ss_pred HHHHHHHc-------CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHHHHH
Confidence 33343333 23444 33443222456667778877776666555443
No 496
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=29.94 E-value=90 Score=36.58 Aligned_cols=59 Identities=20% Similarity=0.254 Sum_probs=43.2
Q ss_pred CCCHHHHHHHHHHHHHhCCC---CeEEEEeccccChHH-HHHHHHhcCCcEEEEe--cCCCCCCc
Q psy12805 504 IYSIEDLAELIYDLKCANPN---ARISVKLVSEVGVGV-VASGVAKGKAEHIVIS--GHDGGTGA 562 (1429)
Q Consensus 504 i~siedL~qlI~~Lk~~~~~---~pV~VKLv~e~Gvg~-vA~~~akaGaD~I~Is--G~~GGTga 562 (1429)
..+|.++.++|..|++..|. .||.+=.=-..|.+. -+..+.++||+.|..+ |.++++|.
T Consensus 182 ~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGeraGN 246 (370)
T 3rmj_A 182 YSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGN 246 (370)
T ss_dssp CCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCB
T ss_pred CcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccccCccccc
Confidence 45778999999999999876 788887544456665 3345789999999876 55554443
No 497
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=29.82 E-value=32 Score=40.84 Aligned_cols=26 Identities=8% Similarity=-0.054 Sum_probs=23.2
Q ss_pred CceEEEccccccccHHHHHHhCCCCc
Q psy12805 1242 KGLRIQAARCMECGVPFCQSSHGCPL 1267 (1429)
Q Consensus 1242 k~lvVIGaGcIgcE~a~c~s~~Gc~V 1267 (1429)
.+++|||||..|+..+..+++.|.+|
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~G~~V 31 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQLGFNT 31 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeE
Confidence 36999999999999999998888877
No 498
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=29.42 E-value=84 Score=35.90 Aligned_cols=70 Identities=20% Similarity=0.110 Sum_probs=37.0
Q ss_pred HHHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEc-CCcccHHHH----HHHHHhc
Q psy12805 542 GVAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQAD-GQIRTGFDV----VVAALLG 616 (1429)
Q Consensus 542 ~~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~Lias-GGIrtg~Dv----~kAlaLG 616 (1429)
-+.+.|+|.|++-|..|- . .-+....=..-+..+.... ..+++||+- |...| .|+ -.|-.+|
T Consensus 53 ~li~~Gv~Gi~v~GtTGE---~-------~~Ls~~Er~~v~~~~v~~~--~grvpViaGvg~~~t-~~ai~la~~A~~~G 119 (315)
T 3na8_A 53 RLIDGGVHAIAPLGSTGE---G-------AYLSDPEWDEVVDFTLKTV--AHRVPTIVSVSDLTT-AKTVRRAQFAESLG 119 (315)
T ss_dssp HHHHTTCSEEECSSGGGT---G-------GGSCHHHHHHHHHHHHHHH--TTSSCBEEECCCSSH-HHHHHHHHHHHHTT
T ss_pred HHHHcCCCEEEECccccC---h-------hhCCHHHHHHHHHHHHHHh--CCCCcEEEecCCCCH-HHHHHHHHHHHhcC
Confidence 346789999999877443 2 2233332221111111111 246888854 44444 333 2456789
Q ss_pred chhhhcch
Q psy12805 617 ADEIGLST 624 (1429)
Q Consensus 617 Adavg~gt 624 (1429)
||++-+-+
T Consensus 120 adavlv~~ 127 (315)
T 3na8_A 120 AEAVMVLP 127 (315)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 99886544
No 499
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=29.17 E-value=1.7e+02 Score=35.35 Aligned_cols=100 Identities=16% Similarity=0.066 Sum_probs=62.2
Q ss_pred ccccCCCCCCCC--CHHHHHHHHHHHHHhCCCCeEEEEeccccChH--HHHHHHHhcCCcEEEEecCCCCCCcccccccc
Q psy12805 494 GLISPPPHHDIY--SIEDLAELIYDLKCANPNARISVKLVSEVGVG--VVASGVAKGKAEHIVISGHDGGTGASSWTGIK 569 (1429)
Q Consensus 494 ~LisP~~h~di~--siedL~qlI~~Lk~~~~~~pV~VKLv~e~Gvg--~vA~~~akaGaD~I~IsG~~GGTgaap~~~~~ 569 (1429)
..||=-.++++. |.+||.+. |+.. +.||.-| ...+. .+.. +..+|||+|.|.-.-
T Consensus 82 ~~IsvLTd~~~F~gs~~dL~~v----r~~v-~lPvLrK---DFI~d~~Qi~e-a~~~GAD~ILLi~a~------------ 140 (452)
T 1pii_A 82 SAISVLTDEKYFQGSFNFLPIV----SQIA-PQPILCK---DFIIDPYQIYL-ARYYQADACLLMLSV------------ 140 (452)
T ss_dssp SEEEEECCSTTTCCCTTHHHHH----HHHC-CSCEEEE---SCCCSHHHHHH-HHHTTCSEEEEETTT------------
T ss_pred cEEEEEecccccCCCHHHHHHH----HHhc-CCCeEEE---eccCCHHHHHH-HHHcCCCEEEEEccc------------
Confidence 344443444433 77776643 4444 7899888 44322 2333 778999999998662
Q ss_pred ccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHHHHHHhcchhhhcch
Q psy12805 570 NAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVVVAALLGADEIGLST 624 (1429)
Q Consensus 570 ~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~kAlaLGAdavg~gt 624 (1429)
++- .-|.+..+.....|+ -.|+- +.|..++..|+.+||+.+|+--
T Consensus 141 ---l~~-~~l~~l~~~a~~lgm---~~LvE---vh~~eE~~~A~~lga~iIGinn 185 (452)
T 1pii_A 141 ---LDD-DQYRQLAAVAHSLEM---GVLTE---VSNEEEQERAIALGAKVVGINN 185 (452)
T ss_dssp ---CCH-HHHHHHHHHHHHTTC---EEEEE---ECSHHHHHHHHHTTCSEEEEES
T ss_pred ---CCH-HHHHHHHHHHHHcCC---eEEEE---eCCHHHHHHHHHCCCCEEEEeC
Confidence 121 234444444444453 23443 6899999999999999998654
No 500
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=29.11 E-value=75 Score=36.25 Aligned_cols=90 Identities=17% Similarity=0.136 Sum_probs=49.6
Q ss_pred HHhcCCcEEEEecCCCCCCccccccccccCCChHHHHHHHHHHHHhcCCCCceEEEEcCCcccHHHHH----HHHHhcch
Q psy12805 543 VAKGKAEHIVISGHDGGTGASSWTGIKNAGLPWELGVAETHQVLALNNLRSRVVLQADGQIRTGFDVV----VAALLGAD 618 (1429)
Q Consensus 543 ~akaGaD~I~IsG~~GGTgaap~~~~~~~GiP~~laL~ev~q~L~~~gLR~~V~LiasGGIrtg~Dv~----kAlaLGAd 618 (1429)
+.++|+|.|++-|..|- ++ -+....=..-+..+.... ..+++||+.-|- +-.|++ .|-.+|||
T Consensus 42 li~~Gv~Gl~v~GtTGE---~~-------~Ls~eEr~~v~~~~v~~~--~grvpViaGvg~-~t~~ai~la~~A~~~Gad 108 (316)
T 3e96_A 42 IVDNGIDVIVPCGNTSE---FY-------ALSLEEAKEEVRRTVEYV--HGRALVVAGIGY-ATSTAIELGNAAKAAGAD 108 (316)
T ss_dssp HHTTTCCEECTTSGGGT---GG-------GSCHHHHHHHHHHHHHHH--TTSSEEEEEECS-SHHHHHHHHHHHHHHTCS
T ss_pred HHHcCCCEEEeCccccC---cc-------cCCHHHHHHHHHHHHHHh--CCCCcEEEEeCc-CHHHHHHHHHHHHhcCCC
Confidence 45679999998877433 22 233332211111111111 247888865443 555553 34678888
Q ss_pred hhhcchhHHHHhccccccccccCCCCccceecCHHHHhhcCCcHHHHHHHHHHHHHH
Q psy12805 619 EIGLSTAPLITMGCTMMRKCHLNTCPVGIATQDPELRKKFAGKPEHVINYLFMLAEE 675 (1429)
Q Consensus 619 avg~gt~~L~algc~~~r~c~~~~cP~giatqd~~lr~~~~g~~e~v~ny~~~l~~e 675 (1429)
++-+-++.|. ....+.+.+||+.+++.
T Consensus 109 avlv~~P~y~------------------------------~~s~~~l~~~f~~va~a 135 (316)
T 3e96_A 109 AVMIHMPIHP------------------------------YVTAGGVYAYFRDIIEA 135 (316)
T ss_dssp EEEECCCCCS------------------------------CCCHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCC------------------------------CCCHHHHHHHHHHHHHh
Confidence 8854432221 23568889999987654
Done!