Query psy12809
Match_columns 153
No_of_seqs 112 out of 558
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 20:19:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12809.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12809hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3aih_A Protein OS-9; beta barr 100.0 1.3E-37 4.6E-42 223.8 11.5 120 21-148 2-124 (124)
2 2rl8_A Cation-dependent mannos 99.3 7.8E-12 2.7E-16 92.4 10.9 111 13-148 24-154 (154)
3 1gp0_A Cation-independent mann 99.1 1.6E-10 5.6E-15 83.9 7.9 59 91-149 79-141 (143)
4 2kva_A Cation-independent mann 98.9 1.7E-08 5.9E-13 73.2 10.9 56 91-148 90-148 (148)
5 2l2g_A IGF2R domain 11; insuli 98.7 7.4E-08 2.5E-12 70.6 8.5 59 92-150 80-142 (151)
6 2lla_A Mannose-6-phosphate/ins 98.7 8.7E-08 3E-12 68.8 8.1 59 92-150 77-139 (140)
7 2l21_A Cation-independent mann 98.6 1.3E-07 4.3E-12 69.5 8.1 61 91-151 82-146 (154)
8 1q25_A CI, cation-independent 98.3 1.7E-06 5.7E-11 73.0 7.4 54 93-148 375-432 (432)
9 2v5o_A Cation-independent mann 98.0 1.7E-05 5.9E-10 69.8 7.6 59 92-150 80-142 (627)
10 1q25_A CI, cation-independent 97.7 7E-05 2.4E-09 63.0 6.4 56 92-149 221-282 (432)
11 2v5o_A Cation-independent mann 97.6 0.00011 3.9E-09 64.5 7.1 57 93-150 565-621 (627)
12 2jx9_A Latrophilin 1; lectin, 22.8 47 0.0016 21.8 2.2 20 100-121 84-103 (106)
No 1
>3aih_A Protein OS-9; beta barrel, lectin, sugar binding protein; HET: BMA MAN; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=223.82 Aligned_cols=120 Identities=32% Similarity=0.657 Sum_probs=92.8
Q ss_pred CCCceeecCCeEEEEEecCCeeEEeecCCCCCceecccceEEeeecCccccccCCCCCCccceeecCcccceEEEEcCCC
Q psy12809 21 QKPCSYRLESYWTYEVCHGRYVRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGVMGFKKIEGIKLPYLEINMTDG 100 (153)
Q Consensus 21 ~~~C~~~~~g~WtYe~C~~~~v~Qfh~~~~~g~~~~~~~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~y~~G 100 (153)
++.|+++..|||+|||||+++|+|||.+.. .+...+++||+|++... |.....+. .. .....+|++|.|+||
T Consensus 2 ~~~C~~~~~g~wtYe~C~~k~v~Q~h~~~~---~~~~~~~~LG~~~~~~~--~~~~~~~~--~~-~~~~~~y~~~~y~~G 73 (124)
T 3aih_A 2 SAPCLLKTKDWWTYEFCYGRHIQQYHMEDS---EIKGEVLYLGYYQSAFD--WDDETAKA--SK-QHRLKRYHSQTYGNG 73 (124)
T ss_dssp --CCEEEEETTEEEEEETTTEEEEECEETT---EECSCCEEEEEEEEEEE--EEC--------------CEEEEEEEECC
T ss_pred CCcceEcCCCEEEEEECCCCeEEEecccCC---CCCCCEEECcccccccc--cccccccc--cc-ccccceeEEEEcCCC
Confidence 368999999999999999999999998753 23356789999987311 11000000 00 012357999999999
Q ss_pred cccCCCCCCcEEEEEEEecCC---CCcceEEeeecCceEEEEEEeccccCC
Q psy12809 101 TLCDLNGEPRETRVLYMCHST---GRHDIYSLKETSTCKYEVIILTSLLCK 148 (153)
Q Consensus 101 ~~Cd~tg~~R~t~V~~~C~~~---~~~~I~~V~E~~tC~Y~i~v~tP~lC~ 148 (153)
+.||+||++|+|+|+|.|+++ ..+.|++|.||++|+|.|+|.||+||+
T Consensus 74 ~~Cd~~g~~Rst~V~~~C~~~~~~~~~~i~~v~E~~~C~Y~~~v~tP~~C~ 124 (124)
T 3aih_A 74 SKCDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCP 124 (124)
T ss_dssp SBCTTTSCBCEEEEEEEECTTCCSSCCEEEEEEEEETTEEEEEEEEGGGCC
T ss_pred CccCCCCCCcEEEEEEEeCCCCCCCccEEEEEcCCCceEEEEEEEecccCC
Confidence 999889999999999999986 258999999999999999999999995
No 2
>2rl8_A Cation-dependent mannose-6-phosphate receptor; P-type lectin, lectin, glycop lysosome, membrane, transmembrane, transport; HET: NAG M6D; 1.45A {Bos taurus} SCOP: b.64.1.1 PDB: 1keo_A* 2rl7_A* 2rl6_A* 2rl9_A* 2rlb_A* 3cy4_A* 3k41_A* 3k43_A* 3k42_A* 1m6p_A* 1c39_A*
Probab=99.35 E-value=7.8e-12 Score=92.39 Aligned_cols=111 Identities=21% Similarity=0.352 Sum_probs=78.7
Q ss_pred HHhhhhcCCCCceee----cCCeEEEEEecCCe---------eEEeecCCCCCceecccceEEeeecCccccccCCCCCC
Q psy12809 13 EFIEPLFSQKPCSYR----LESYWTYEVCHGRY---------VRQFHEDRESKKEVKLQEYYLGRWDKTLNKLQDSPEGV 79 (153)
Q Consensus 13 ~ll~~l~~~~~C~~~----~~g~WtYe~C~~~~---------v~Qfh~~~~~g~~~~~~~~~LG~~~~~~~~~~~~~~~~ 79 (153)
.-|.||. ++|+.. ..+-|+|.||.-+. +-|.-+.. + ...+||.+.....
T Consensus 24 ~~L~pL~--~~~f~~~~~~~~~~Y~Y~~nVCg~~~~~~~~ag~cQ~~~~~---~----~~~~iG~~~~~~~--------- 85 (154)
T 2rl8_A 24 KRLTPLF--QKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSN---G----KETVVGRFNETQI--------- 85 (154)
T ss_dssp HHTGGGT--TCCEECCCC---CCEEEEECSSSCCSSSSSCEEEEEEETTT---C----CEEEEEEEEEEEE---------
T ss_pred ecccccc--CCeeEEeeccCCCceEEEEEEecCCCCCCCCccEEEEecCC---C----ceEEeeeccceEE---------
Confidence 3577774 578874 24999999999777 77766542 1 1247999976421
Q ss_pred ccceeecCcccceEEEEcCCCcccCC--CCCCcEEEEEEEecCCCC-cceEEeeec----CceEEEEEEeccccCC
Q psy12809 80 MGFKKIEGIKLPYLEINMTDGTLCDL--NGEPRETRVLYMCHSTGR-HDIYSLKET----STCKYEVIILTSLLCK 148 (153)
Q Consensus 80 ~~~~~~~~~~~~y~~~~y~~G~~Cd~--tg~~R~t~V~~~C~~~~~-~~I~~V~E~----~tC~Y~i~v~tP~lC~ 148 (153)
.++ ..-+.+.|.+|+.|+- ++.+|+|.|.|.|++... .....|.|+ +.|.|.|++.||.+|.
T Consensus 86 -----~~g--~d~i~L~Y~~G~~~~s~c~~~~Rst~I~f~Cd~~~~~~~~~~v~E~~~~~~~C~Y~F~~~T~~ACP 154 (154)
T 2rl8_A 86 -----FQG--SNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS 154 (154)
T ss_dssp -----EEC--SSEEEEEEEECCBCSSSGGGCBCCEEEEEEECTTCSSEEEEEEEEECCSSSCCEEEEEEEEGGGCC
T ss_pred -----EcC--CceEEEEECCCcccccccCCCcceEEEEEEeCCCCCCCccEEEecccCccCceEEEEEEecCccCC
Confidence 111 1137789999999541 688999999999998632 234456654 8999999999999995
No 3
>1gp0_A Cation-independent mannose-6-phosphate receptor; insulin-like growth factor, transport, beta barrel; 1.4A {Homo sapiens} SCOP: b.64.1.1 PDB: 1e6f_A 1gp3_A 1gqb_A 2cnj_D 2l29_A 2l2a_A
Probab=99.12 E-value=1.6e-10 Score=83.86 Aligned_cols=59 Identities=19% Similarity=0.392 Sum_probs=50.5
Q ss_pred ceEEEEcCCCcccCC-CCCCcEEEEEEEecCCC--CcceEEeeec-CceEEEEEEeccccCCC
Q psy12809 91 PYLEINMTDGTLCDL-NGEPRETRVLYMCHSTG--RHDIYSLKET-STCKYEVIILTSLLCKH 149 (153)
Q Consensus 91 ~y~~~~y~~G~~Cd~-tg~~R~t~V~~~C~~~~--~~~I~~V~E~-~tC~Y~i~v~tP~lC~~ 149 (153)
.++.+.|.+|+.|+- .|.+|+|.|.|.|+++. ...++.|.|+ ..|.|.|.+.||.+|..
T Consensus 79 ~~l~L~Y~~G~~C~~~~g~~rst~I~f~C~~~~~~~~~~~~v~~~~~~C~Y~f~~~T~~AC~~ 141 (143)
T 1gp0_A 79 QVLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGPTNRPMLISLDKQTCTLFFSWHTPLACEQ 141 (143)
T ss_dssp TEEEEEECCCSBCSSSTTCBCEEEEEEEECSSCCSSCCCEEEEEETTTTEEEEEEEEGGGCC-
T ss_pred CEEEEEECCCCcCCCCCCceeEEEEEEEeCCCCCCCCCCEEeecCCCCcEEEEEEeecccCCC
Confidence 578999999999994 38899999999999874 2567889985 68999999999999975
No 4
>2kva_A Cation-independent mannose-6-phosphate receptor; transport, lysosome, sugar binding, glyco membrane, phosphoprotein, transmembrane, disulfide bond; NMR {Bos taurus} PDB: 2kvb_A
Probab=98.90 E-value=1.7e-08 Score=73.18 Aligned_cols=56 Identities=23% Similarity=0.399 Sum_probs=46.3
Q ss_pred ceEEEEcCCCcccCCCCC--CcEEEEEEEecCCCC-cceEEeeecCceEEEEEEeccccCC
Q psy12809 91 PYLEINMTDGTLCDLNGE--PRETRVLYMCHSTGR-HDIYSLKETSTCKYEVIILTSLLCK 148 (153)
Q Consensus 91 ~y~~~~y~~G~~Cd~tg~--~R~t~V~~~C~~~~~-~~I~~V~E~~tC~Y~i~v~tP~lC~ 148 (153)
..+.+.|.+|+.|+ +|. +|+|.|.|.|+++.. .....+.| ..|.|.|.+.||.+|.
T Consensus 90 ~~l~l~Y~~G~~C~-~~~~~~rst~I~f~Cd~~~~~~~p~~~~~-~~C~Y~f~~~T~~ACp 148 (148)
T 2kva_A 90 GMIQLTYRDGTPYN-NEKRTPRATLITFLCDRDAGVGFPEYQEE-DNSTYNFRWYTSYACP 148 (148)
T ss_dssp TEEEEEEBCCCCCS-CTTCCCCEEEEEEECCSSCSSCCEEECSC-CSSEEEEEEECGGGCC
T ss_pred CeEEEEECCCCcCC-CCCCceeEEEEEEEeCCCCCCCCCEEeec-CCCEEEEEEeccccCc
Confidence 47899999999999 554 799999999999742 23455655 8999999999999995
No 5
>2l2g_A IGF2R domain 11; insulin-like growth factor 2, mannose 6 phosphate receptor, imprinting, protein evolution, signaling protein; NMR {Monodelphis domestica}
Probab=98.69 E-value=7.4e-08 Score=70.64 Aligned_cols=59 Identities=19% Similarity=0.349 Sum_probs=49.6
Q ss_pred eEEEEcCCCcccCC-CCCCcEEEEEEEecCCC--CcceEEeee-cCceEEEEEEeccccCCCC
Q psy12809 92 YLEINMTDGTLCDL-NGEPRETRVLYMCHSTG--RHDIYSLKE-TSTCKYEVIILTSLLCKHP 150 (153)
Q Consensus 92 y~~~~y~~G~~Cd~-tg~~R~t~V~~~C~~~~--~~~I~~V~E-~~tC~Y~i~v~tP~lC~~p 150 (153)
-+.+.|.+|+.|.- ++.+|+|.|.|.|.++. ....+.|.| ..+|.|.|.+.|+.+|...
T Consensus 80 ~l~L~Y~~Gs~C~~~~~~~rst~I~F~Cd~~~~~~~~p~~v~~~~~~C~Y~F~w~T~~AC~~~ 142 (151)
T 2l2g_A 80 VLQLVYDDGAPCPSKNALKYKSVISFVCTHDSGANNKPVFVSLDKQTCTLYFSWHTPLACEKE 142 (151)
T ss_dssp EEEEEECSCSBCCSSSSSBCEEEEEEEECSSSSCCCCEEEEEEETTTTEEEEEEEEGGGSCCS
T ss_pred EEEEEECCCCCCCCCCCceeEEEEEEEECCCCCCCCCcEEEEecCCceEEEEEEechhcCCCC
Confidence 58899999999963 36789999999999873 245677888 6679999999999999854
No 6
>2lla_A Mannose-6-phosphate/insulin-like growth factor II; monotreme, IGF-II, domain 11, transport; NMR {Tachyglossus aculeatus}
Probab=98.66 E-value=8.7e-08 Score=68.80 Aligned_cols=59 Identities=22% Similarity=0.388 Sum_probs=47.1
Q ss_pred eEEEEcCCCcccCCC-CCCcEEEEEEEecCCCC---cceEEeeecCceEEEEEEeccccCCCC
Q psy12809 92 YLEINMTDGTLCDLN-GEPRETRVLYMCHSTGR---HDIYSLKETSTCKYEVIILTSLLCKHP 150 (153)
Q Consensus 92 y~~~~y~~G~~Cd~t-g~~R~t~V~~~C~~~~~---~~I~~V~E~~tC~Y~i~v~tP~lC~~p 150 (153)
-+.+.|.+|+.|.-. +.+|+|.|.|.|+++.. ..+....|...|.|.|.+.|+++|.-+
T Consensus 77 ~l~L~Y~~G~~C~~~~~~~~st~I~F~C~~~~~~~~~p~~~~~~~~~C~y~F~w~T~~ACp~~ 139 (140)
T 2lla_A 77 VLQLVYEDGDPCPANLHLKYKSVISFVCKSDAGPTSQPLLLSVDEHTCTLFFSWHTSLACEQE 139 (140)
T ss_dssp EEEEEEBCCCBCTTTSSCBCEEEEEEEECTTTTTSCEEEEEEECTTTCEEEEEEEEGGGSCCC
T ss_pred EEEEEEcCCCcCCCCCCceeEEEEEEEcCCCCCCCCCceEEeccCCCCEEEEEEeeCccCCCC
Confidence 478999999999842 46799999999988632 223334678899999999999999865
No 7
>2l21_A Cation-independent mannose-6-phosphate receptor; genomic imprinting, insulin-like growth factor 2, mannose 6 receptor, protein evolution; NMR {Gallus gallus}
Probab=98.62 E-value=1.3e-07 Score=69.53 Aligned_cols=61 Identities=21% Similarity=0.295 Sum_probs=50.2
Q ss_pred ceEEEEcCCCcccCC-CCCCcEEEEEEEecCCC--CcceEEeee-cCceEEEEEEeccccCCCCC
Q psy12809 91 PYLEINMTDGTLCDL-NGEPRETRVLYMCHSTG--RHDIYSLKE-TSTCKYEVIILTSLLCKHPK 151 (153)
Q Consensus 91 ~y~~~~y~~G~~Cd~-tg~~R~t~V~~~C~~~~--~~~I~~V~E-~~tC~Y~i~v~tP~lC~~p~ 151 (153)
.-+.+.|.+|+.|.- .+.+|+|.|.|.|.++. ....+.|.| ...|.|.|.+.|+.+|....
T Consensus 82 ~~l~L~Y~~Gs~C~~~~~~~rsT~I~F~Cd~~~~~~~~p~~v~~~~d~C~Y~F~w~T~~AC~~~~ 146 (154)
T 2l21_A 82 QVLKLVYEDGDPCPTDLKMKHKSYFSFVCKSDAGDDSQPVFLSFDEQTCTSYFSWHTSLACEEEV 146 (154)
T ss_dssp TEEEEEEECCCCCSSCSSSCCEEEEEEECCSSCTTTTCEEEEEEETTTTEEEEEEECTTTCCSSC
T ss_pred CEEEEEECCCCcCCCCCCCEEEEEEEEEECCCCCCCCceEEEEECCCCeEEEEEEeccccCCCCC
Confidence 357899999999963 57899999999999873 245677775 67899999999999998654
No 8
>1q25_A CI, cation-independent mannose 6-phosphate receptor, MAN-6-P receptor, CI-MPR; P-lectin, protein transport,S binding protein; HET: MAN BMA NAG; 1.80A {Bos taurus} SCOP: b.64.1.1 b.64.1.1 b.64.1.1 PDB: 1syo_A* 1sz0_A*
Probab=98.27 E-value=1.7e-06 Score=72.98 Aligned_cols=54 Identities=22% Similarity=0.337 Sum_probs=47.9
Q ss_pred EEEEcCCCcccCCCCCCcEEEEEEEecCCCC----cceEEeeecCceEEEEEEeccccCC
Q psy12809 93 LEINMTDGTLCDLNGEPRETRVLYMCHSTGR----HDIYSLKETSTCKYEVIILTSLLCK 148 (153)
Q Consensus 93 ~~~~y~~G~~Cd~tg~~R~t~V~~~C~~~~~----~~I~~V~E~~tC~Y~i~v~tP~lC~ 148 (153)
+.+.|.+|+.|. ++..|++.|.|.|.++.. ..++.+.|. .|.|.|++.|+.+|.
T Consensus 375 l~L~Y~~G~~C~-~~~~rst~I~f~Cd~~~~~~~~~~p~~~~e~-~C~Y~f~~~T~~AC~ 432 (432)
T 1q25_A 375 LTLIYFGGEECS-SGFQRMSVINFECNQTAGNNGRGAPVFTGEV-DCTYFFTWDTKYACV 432 (432)
T ss_dssp EEEEECCCCBCT-TSCBCEEEEEEEECTTCTTTTTCCCEEEEEE-TTEEEEEEEEGGGCC
T ss_pred EEEEECCCCcCC-CCCeeEEEEEEEeCCCCCcCCCCccEEEeeC-ceEEEEEEeeeEecC
Confidence 789999999998 899999999999998642 346788898 899999999999994
No 9
>2v5o_A Cation-independent mannose-6-phosphate receptor; membrane, lysosome, transport, beta barrel, phosphorylation, fibronec II; HET: NAG; 2.91A {Homo sapiens} PDB: 2v5p_A* 2v5n_A*
Probab=97.95 E-value=1.7e-05 Score=69.77 Aligned_cols=59 Identities=19% Similarity=0.396 Sum_probs=49.4
Q ss_pred eEEEEcCCCcccC-CCCCCcEEEEEEEecCCC--CcceEEeee-cCceEEEEEEeccccCCCC
Q psy12809 92 YLEINMTDGTLCD-LNGEPRETRVLYMCHSTG--RHDIYSLKE-TSTCKYEVIILTSLLCKHP 150 (153)
Q Consensus 92 y~~~~y~~G~~Cd-~tg~~R~t~V~~~C~~~~--~~~I~~V~E-~~tC~Y~i~v~tP~lC~~p 150 (153)
-+.+.|.+|+.|. .+|.+|+|.|.|.|+++. ....+.|.| ...|.|.|.+.||++|..+
T Consensus 80 ~l~L~Y~~G~~C~~~~~~~~sT~I~f~Cd~~~~~~~~p~~v~~~~~~C~y~f~w~T~~AC~~~ 142 (627)
T 2v5o_A 80 VLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGPTNRPMLISLDKQTCTLFFSWHTPLACEQA 142 (627)
T ss_dssp EEEEEEBSCSBCSSSTTCBCEEEEEEEECSSCCTTCSCEEEEEETTTTEEEEEEEEGGGCCSC
T ss_pred EEEEEECCCCcCCCCCCceEEEEEEEEeCCCCCcCCcceEeeecCCCcEEEEEEecHHhCCCC
Confidence 4778999999997 357899999999998863 245677887 7899999999999999743
No 10
>1q25_A CI, cation-independent mannose 6-phosphate receptor, MAN-6-P receptor, CI-MPR; P-lectin, protein transport,S binding protein; HET: MAN BMA NAG; 1.80A {Bos taurus} SCOP: b.64.1.1 b.64.1.1 b.64.1.1 PDB: 1syo_A* 1sz0_A*
Probab=97.66 E-value=7e-05 Score=63.01 Aligned_cols=56 Identities=25% Similarity=0.576 Sum_probs=45.1
Q ss_pred eEEEEcCCC-----cccCCCCCCcEEEEEEEecCCCC-cceEEeeecCceEEEEEEeccccCCC
Q psy12809 92 YLEINMTDG-----TLCDLNGEPRETRVLYMCHSTGR-HDIYSLKETSTCKYEVIILTSLLCKH 149 (153)
Q Consensus 92 y~~~~y~~G-----~~Cd~tg~~R~t~V~~~C~~~~~-~~I~~V~E~~tC~Y~i~v~tP~lC~~ 149 (153)
-+.+.|.+| +.|. +..|+|+|.|.|+++.. ..+..+.|...|.|.|++.|+.+|..
T Consensus 221 ~l~L~Y~~g~~~~~~~C~--~~~~st~I~f~C~~~~~~~~~~~~~~~~~C~Y~fe~~T~~ACp~ 282 (432)
T 1q25_A 221 RLVLSYVKEGAGQPDFCD--GHSPAVTITFVCPSERREGTIPKLTAKSNCRFEIEWVTEYACHR 282 (432)
T ss_dssp EEEEEEECCSSCCCCTTS--SCCCEEEEEEECCSSCCCCCCCEEEEESSSEEEEEEECGGGSCG
T ss_pred cEEEEEcCCCcCCCCcCC--CcccEEEEEEEcCCCCCCCCCceEEecCCCEEEEEEeecccCCC
Confidence 478899999 5664 67899999999998642 12445668889999999999999975
No 11
>2v5o_A Cation-independent mannose-6-phosphate receptor; membrane, lysosome, transport, beta barrel, phosphorylation, fibronec II; HET: NAG; 2.91A {Homo sapiens} PDB: 2v5p_A* 2v5n_A*
Probab=97.60 E-value=0.00011 Score=64.54 Aligned_cols=57 Identities=12% Similarity=0.289 Sum_probs=46.0
Q ss_pred EEEEcCCCcccCCCCCCcEEEEEEEecCCCCcceEEeeecCceEEEEEEeccccCCCC
Q psy12809 93 LEINMTDGTLCDLNGEPRETRVLYMCHSTGRHDIYSLKETSTCKYEVIILTSLLCKHP 150 (153)
Q Consensus 93 ~~~~y~~G~~Cd~tg~~R~t~V~~~C~~~~~~~I~~V~E~~tC~Y~i~v~tP~lC~~p 150 (153)
+.+.|.+|+.|- .+..|++.|+|.|+......+....|...|.|.|...|.++|...
T Consensus 565 v~l~Y~~G~~C~-~~~~~st~I~f~C~~~~g~P~~~~~~~~~C~y~f~W~T~~AC~~~ 621 (627)
T 2v5o_A 565 VVVTYSKGYPCG-GNKTASSVIELTCTKTVGRPAFKRFDIDSCTYYFSWDSRAACAVK 621 (627)
T ss_dssp EEEEECCCSBCS-TTCBCEEEEEEEECSSEEEEEEEEEETTTTEEEEEEEEGGGCCCC
T ss_pred EEEEECCCCcCC-CCCcceEEEEEEeCCCCCCcEEEEecCCCCEEEEEeCChhhcccc
Confidence 789999999997 677899999999986421223334567789999999999999864
No 12
>2jx9_A Latrophilin 1; lectin, beta-sandwich, disulphide, glycosylated, G-protein C receptor, membrane, receptor, transducer, transmembrane, CE adhesion; HET: NAG; NMR {Mus musculus} PDB: 2jxa_A*
Probab=22.83 E-value=47 Score=21.81 Aligned_cols=20 Identities=25% Similarity=0.401 Sum_probs=16.8
Q ss_pred CcccCCCCCCcEEEEEEEecCC
Q psy12809 100 GTLCDLNGEPRETRVLYMCHST 121 (153)
Q Consensus 100 G~~Cd~tg~~R~t~V~~~C~~~ 121 (153)
||.|. |..-..+|.|.|.+.
T Consensus 84 gDPCp--gt~KyL~V~y~C~~~ 103 (106)
T 2jx9_A 84 PDPCP--GTYKYLEVQYDCVPY 103 (106)
T ss_dssp CCSST--TSCCEEEEEEEEEES
T ss_pred CCCCC--CccEEEEEEEEeecc
Confidence 68997 667789999999874
Done!