Query psy12810
Match_columns 276
No_of_seqs 385 out of 2618
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 20:22:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12810.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12810hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vdc_G Glutamate synthase [NAD 99.9 4.2E-28 1.4E-32 221.3 9.8 209 1-276 71-286 (456)
2 1gte_A Dihydropyrimidine dehyd 99.9 5.9E-23 2E-27 203.7 9.5 214 2-276 129-354 (1025)
3 1cjc_A Protein (adrenodoxin re 99.8 5.6E-19 1.9E-23 161.3 9.4 154 114-274 9-165 (460)
4 1lqt_A FPRA; NADP+ derivative, 99.8 8.4E-19 2.9E-23 160.0 8.8 155 114-275 6-168 (456)
5 4gcm_A TRXR, thioredoxin reduc 99.7 1.7E-17 5.9E-22 143.6 7.4 144 112-276 7-167 (312)
6 4a5l_A Thioredoxin reductase; 99.7 1.9E-17 6.5E-22 143.2 5.1 145 114-276 7-174 (314)
7 2xve_A Flavin-containing monoo 99.7 5.1E-17 1.7E-21 148.6 6.5 142 115-275 6-218 (464)
8 1ps9_A 2,4-dienoyl-COA reducta 99.7 5.8E-17 2E-21 154.5 7.1 137 114-275 376-515 (671)
9 4a9w_A Monooxygenase; baeyer-v 99.6 1.2E-16 4.2E-21 139.9 5.4 144 114-275 6-184 (357)
10 3klj_A NAD(FAD)-dependent dehy 99.6 4.6E-17 1.6E-21 145.4 0.6 145 114-275 12-167 (385)
11 2gv8_A Monooxygenase; FMO, FAD 99.6 3.1E-16 1.1E-20 142.6 6.0 144 114-275 9-233 (447)
12 3kd9_A Coenzyme A disulfide re 99.6 2.9E-16 1E-20 142.9 4.4 146 114-275 6-169 (449)
13 3oc4_A Oxidoreductase, pyridin 99.6 2.5E-16 8.7E-21 143.4 3.1 147 114-275 5-168 (452)
14 4b1b_A TRXR, thioredoxin reduc 99.6 9.7E-16 3.3E-20 142.1 6.1 164 43-219 51-324 (542)
15 3itj_A Thioredoxin reductase 1 99.6 7.5E-16 2.6E-20 134.2 5.0 145 113-275 24-194 (338)
16 1xhc_A NADH oxidase /nitrite r 99.6 1.2E-16 4E-21 141.9 -0.5 147 109-275 8-164 (367)
17 3k30_A Histamine dehydrogenase 99.6 9.8E-16 3.4E-20 146.5 5.3 141 114-275 394-546 (690)
18 3r9u_A Thioredoxin reductase; 99.6 1.3E-15 4.4E-20 131.4 5.5 140 114-275 7-168 (315)
19 1o94_A Tmadh, trimethylamine d 99.6 1.9E-15 6.3E-20 145.3 7.0 141 114-275 392-551 (729)
20 2q7v_A Thioredoxin reductase; 99.6 2.7E-15 9.4E-20 130.4 7.5 142 113-275 10-173 (325)
21 2vdc_G Glutamate synthase [NAD 99.6 2E-15 6.8E-20 137.5 6.7 66 43-109 131-196 (456)
22 3gwf_A Cyclohexanone monooxyge 99.6 8.3E-16 2.8E-20 142.9 3.9 146 112-275 9-199 (540)
23 3lzw_A Ferredoxin--NADP reduct 99.6 5.9E-16 2E-20 134.5 2.7 141 114-275 10-175 (332)
24 3ef6_A Toluene 1,2-dioxygenase 99.6 1.8E-15 6.3E-20 136.1 5.8 145 115-275 6-164 (410)
25 2gag_A Heterotetrameric sarcos 99.6 1.7E-15 5.9E-20 149.5 6.0 146 114-275 131-305 (965)
26 3uox_A Otemo; baeyer-villiger 99.6 8.5E-16 2.9E-20 143.0 3.2 151 113-275 11-206 (545)
27 4ap3_A Steroid monooxygenase; 99.5 1.1E-15 3.9E-20 142.3 3.3 146 112-275 22-212 (549)
28 1nhp_A NADH peroxidase; oxidor 99.5 9E-16 3.1E-20 139.6 2.5 148 115-275 4-170 (447)
29 1zk7_A HGII, reductase, mercur 99.5 4E-15 1.4E-19 136.0 6.5 141 114-275 7-197 (467)
30 1vdc_A NTR, NADPH dependent th 99.5 3.8E-15 1.3E-19 129.7 5.6 144 114-275 11-180 (333)
31 3f8d_A Thioredoxin reductase ( 99.5 4.8E-15 1.6E-19 128.1 6.2 140 113-275 17-175 (323)
32 1zmd_A Dihydrolipoyl dehydroge 99.5 2.5E-15 8.5E-20 137.7 4.4 143 113-275 8-199 (474)
33 1mo9_A ORF3; nucleotide bindin 99.5 1.3E-14 4.3E-19 134.6 9.2 148 110-275 42-235 (523)
34 3d1c_A Flavin-containing putat 99.5 4.1E-15 1.4E-19 131.3 5.6 138 114-275 7-187 (369)
35 2bc0_A NADH oxidase; flavoprot 99.5 9.2E-16 3.2E-20 141.1 1.4 149 114-275 38-215 (490)
36 2qae_A Lipoamide, dihydrolipoy 99.5 3.5E-15 1.2E-19 136.4 5.2 142 114-275 5-195 (468)
37 3ntd_A FAD-dependent pyridine 99.5 7.8E-16 2.7E-20 143.9 0.8 148 115-275 5-172 (565)
38 2zbw_A Thioredoxin reductase; 99.5 3.9E-15 1.3E-19 129.8 5.2 142 114-275 8-173 (335)
39 3l8k_A Dihydrolipoyl dehydroge 99.5 2.7E-15 9.3E-20 137.1 3.8 146 113-276 6-194 (466)
40 4eqs_A Coenzyme A disulfide re 99.5 2.3E-15 7.9E-20 136.5 3.3 144 116-275 5-168 (437)
41 2q0l_A TRXR, thioredoxin reduc 99.5 6.3E-15 2.2E-19 127.2 5.7 140 114-275 4-164 (311)
42 3k30_A Histamine dehydrogenase 99.5 8E-15 2.7E-19 140.2 7.0 164 43-216 400-626 (690)
43 3fbs_A Oxidoreductase; structu 99.5 1.2E-14 4.1E-19 124.2 7.4 142 114-275 5-162 (297)
44 1o94_A Tmadh, trimethylamine d 99.5 6.5E-15 2.2E-19 141.5 6.3 200 2-216 344-648 (729)
45 3iwa_A FAD-dependent pyridine 99.5 6.7E-15 2.3E-19 134.7 6.1 149 114-275 6-180 (472)
46 2cdu_A NADPH oxidase; flavoenz 99.5 3.6E-15 1.2E-19 135.8 4.0 146 115-275 4-170 (452)
47 1fl2_A Alkyl hydroperoxide red 99.5 9E-15 3.1E-19 126.1 6.2 140 114-275 4-165 (310)
48 3lxd_A FAD-dependent pyridine 99.5 5.2E-15 1.8E-19 133.3 4.8 148 113-275 11-173 (415)
49 2a87_A TRXR, TR, thioredoxin r 99.5 6.9E-15 2.4E-19 128.5 4.4 142 113-275 16-176 (335)
50 3ab1_A Ferredoxin--NADP reduct 99.5 8E-15 2.7E-19 129.3 4.9 143 113-275 16-184 (360)
51 3fg2_P Putative rubredoxin red 99.5 5.2E-15 1.8E-19 132.8 3.3 144 116-275 6-163 (404)
52 2yqu_A 2-oxoglutarate dehydrog 99.5 1.2E-14 4E-19 132.5 5.5 142 114-275 4-188 (455)
53 1trb_A Thioredoxin reductase; 99.5 9.3E-15 3.2E-19 126.5 4.3 141 114-275 8-166 (320)
54 1onf_A GR, grase, glutathione 99.5 2.2E-14 7.6E-19 132.2 7.0 139 114-276 5-198 (500)
55 4fk1_A Putative thioredoxin re 99.5 2E-14 6.8E-19 124.0 6.2 144 111-275 6-168 (304)
56 3ics_A Coenzyme A-disulfide re 99.5 3.1E-15 1.1E-19 140.5 1.1 149 114-275 39-208 (588)
57 3lad_A Dihydrolipoamide dehydr 99.5 2.3E-14 7.8E-19 131.3 6.8 144 112-275 4-201 (476)
58 1ps9_A 2,4-dienoyl-COA reducta 99.5 1.8E-14 6E-19 137.4 6.1 164 43-216 382-630 (671)
59 3cty_A Thioredoxin reductase; 99.5 2.5E-14 8.5E-19 124.0 6.5 142 113-275 18-176 (319)
60 1dxl_A Dihydrolipoamide dehydr 99.5 6.8E-15 2.3E-19 134.5 3.0 143 113-275 8-198 (470)
61 2v3a_A Rubredoxin reductase; a 99.5 2.3E-14 7.9E-19 127.7 6.2 146 114-275 7-166 (384)
62 1ebd_A E3BD, dihydrolipoamide 99.5 1.3E-14 4.3E-19 132.3 4.3 141 113-275 5-191 (455)
63 1lvl_A Dihydrolipoamide dehydr 99.5 1E-14 3.6E-19 133.0 3.6 140 113-275 7-192 (458)
64 3cgb_A Pyridine nucleotide-dis 99.5 9.5E-15 3.2E-19 134.0 2.7 149 114-275 39-207 (480)
65 2r9z_A Glutathione amide reduc 99.5 3.9E-14 1.3E-18 129.4 6.6 141 112-275 5-187 (463)
66 1lvl_A Dihydrolipoamide dehydr 99.5 7.6E-14 2.6E-18 127.3 8.5 165 43-219 14-273 (458)
67 1ges_A Glutathione reductase; 99.5 2.5E-14 8.7E-19 130.1 5.2 140 113-275 6-188 (450)
68 2gqw_A Ferredoxin reductase; f 99.5 1.2E-14 4.2E-19 130.6 3.1 141 114-275 10-166 (408)
69 3s5w_A L-ornithine 5-monooxyge 99.5 2.5E-14 8.4E-19 130.5 4.8 148 113-275 32-248 (463)
70 1q1r_A Putidaredoxin reductase 99.5 1.3E-14 4.3E-19 131.4 2.6 147 114-275 7-170 (431)
71 1xdi_A RV3303C-LPDA; reductase 99.5 3.3E-14 1.1E-18 131.0 5.3 141 114-275 5-203 (499)
72 3qfa_A Thioredoxin reductase 1 99.5 2.4E-14 8.1E-19 132.6 4.3 144 112-276 33-232 (519)
73 2hqm_A GR, grase, glutathione 99.5 7.2E-14 2.5E-18 128.1 7.2 141 112-275 12-206 (479)
74 3urh_A Dihydrolipoyl dehydroge 99.5 8E-14 2.7E-18 128.2 7.4 84 125-218 207-304 (491)
75 4b1b_A TRXR, thioredoxin reduc 99.5 6.7E-15 2.3E-19 136.5 0.2 146 111-276 42-245 (542)
76 1v59_A Dihydrolipoamide dehydr 99.4 4.1E-14 1.4E-18 129.7 5.3 141 113-275 7-204 (478)
77 2eq6_A Pyruvate dehydrogenase 99.4 3.3E-14 1.1E-18 129.9 4.5 140 114-275 9-190 (464)
78 3dk9_A Grase, GR, glutathione 99.4 5.5E-14 1.9E-18 128.8 5.9 141 113-276 22-209 (478)
79 3dgz_A Thioredoxin reductase 2 99.4 3.2E-14 1.1E-18 130.8 4.3 144 112-276 7-207 (488)
80 2a8x_A Dihydrolipoyl dehydroge 99.4 6E-14 2.1E-18 128.1 6.0 140 114-275 6-192 (464)
81 3urh_A Dihydrolipoyl dehydroge 99.4 5E-14 1.7E-18 129.6 5.5 140 114-275 28-219 (491)
82 1mo9_A ORF3; nucleotide bindin 99.4 1.1E-13 3.7E-18 128.3 7.4 163 43-216 52-318 (523)
83 1hyu_A AHPF, alkyl hydroperoxi 99.4 6.3E-14 2.2E-18 129.8 5.0 140 114-275 215-376 (521)
84 3oc4_A Oxidoreductase, pyridin 99.4 1.3E-13 4.3E-18 125.6 6.8 167 43-219 11-249 (452)
85 2wpf_A Trypanothione reductase 99.4 4E-14 1.4E-18 130.4 3.5 141 113-275 9-212 (495)
86 1w4x_A Phenylacetone monooxyge 99.4 5.9E-14 2E-18 130.6 4.3 148 111-275 16-207 (542)
87 4a5l_A Thioredoxin reductase; 99.4 2.1E-13 7.2E-18 117.6 7.1 160 43-219 13-255 (314)
88 2yqu_A 2-oxoglutarate dehydrog 99.4 2.1E-13 7.2E-18 124.2 6.8 165 43-218 10-268 (455)
89 1ojt_A Surface protein; redox- 99.4 1.3E-13 4.4E-18 126.5 5.1 141 113-275 8-206 (482)
90 2eq6_A Pyruvate dehydrogenase 99.4 4.9E-13 1.7E-17 122.1 8.2 164 43-218 15-275 (464)
91 1y56_A Hypothetical protein PH 99.4 1.8E-13 6.2E-18 125.9 5.4 139 113-268 110-264 (493)
92 1zk7_A HGII, reductase, mercur 99.4 3.8E-13 1.3E-17 122.9 7.4 82 125-217 185-274 (467)
93 1fec_A Trypanothione reductase 99.4 5.2E-14 1.8E-18 129.4 1.6 141 113-275 5-208 (490)
94 4gcm_A TRXR, thioredoxin reduc 99.4 1.2E-12 4.1E-17 113.0 10.1 159 43-218 15-247 (312)
95 3dk9_A Grase, GR, glutathione 99.4 9.8E-13 3.3E-17 120.5 9.8 164 43-218 29-297 (478)
96 2r9z_A Glutathione amide reduc 99.4 7.5E-13 2.6E-17 120.9 8.9 163 43-217 13-267 (463)
97 3qfa_A Thioredoxin reductase 1 99.4 1E-12 3.4E-17 121.7 9.6 83 125-218 219-319 (519)
98 4dna_A Probable glutathione re 99.4 1.2E-13 4.1E-18 126.1 3.4 140 113-275 7-191 (463)
99 3dgh_A TRXR-1, thioredoxin red 99.4 2.1E-13 7.1E-18 125.2 4.9 144 112-276 10-209 (483)
100 2qae_A Lipoamide, dihydrolipoy 99.4 3.4E-13 1.2E-17 123.2 6.2 164 43-217 11-279 (468)
101 1trb_A Thioredoxin reductase; 99.4 1E-12 3.5E-17 113.6 8.9 162 43-218 14-251 (320)
102 1ges_A Glutathione reductase; 99.4 5.4E-13 1.8E-17 121.4 7.3 163 43-217 13-268 (450)
103 2zbw_A Thioredoxin reductase; 99.4 9.1E-13 3.1E-17 114.7 8.4 162 43-217 14-255 (335)
104 1gte_A Dihydropyrimidine dehyd 99.4 8.4E-13 2.9E-17 131.2 9.1 66 43-109 196-262 (1025)
105 3o0h_A Glutathione reductase; 99.4 3E-13 1E-17 124.1 5.5 164 43-218 35-292 (484)
106 4dna_A Probable glutathione re 99.4 3.5E-13 1.2E-17 123.0 5.9 164 43-218 14-272 (463)
107 1onf_A GR, grase, glutathione 99.4 2E-12 6.8E-17 119.1 10.9 163 43-217 11-278 (500)
108 3o0h_A Glutathione reductase; 99.4 1.5E-13 5.1E-18 126.2 3.3 140 113-275 28-212 (484)
109 1zmd_A Dihydrolipoyl dehydroge 99.4 6.6E-13 2.3E-17 121.5 7.6 166 43-218 15-286 (474)
110 3ic9_A Dihydrolipoamide dehydr 99.4 9.7E-14 3.3E-18 127.7 1.9 143 113-276 10-196 (492)
111 3lad_A Dihydrolipoamide dehydr 99.4 1.1E-12 3.8E-17 120.0 8.7 84 125-218 189-284 (476)
112 3itj_A Thioredoxin reductase 1 99.4 6.7E-13 2.3E-17 115.4 6.8 158 43-217 31-274 (338)
113 1ebd_A E3BD, dihydrolipoamide 99.4 2.2E-12 7.6E-17 117.4 10.4 164 43-218 12-274 (455)
114 3dgz_A Thioredoxin reductase 2 99.4 1.2E-12 4.1E-17 120.2 8.6 83 125-218 194-291 (488)
115 2x8g_A Thioredoxin glutathione 99.4 3.3E-13 1.1E-17 127.0 4.5 186 20-217 90-398 (598)
116 3ic9_A Dihydrolipoamide dehydr 99.3 1.3E-12 4.5E-17 120.2 7.9 82 126-218 184-278 (492)
117 3klj_A NAD(FAD)-dependent dehy 99.3 2.4E-13 8.1E-18 121.3 2.1 161 43-217 18-234 (385)
118 3dgh_A TRXR-1, thioredoxin red 99.3 3.3E-12 1.1E-16 117.1 9.7 82 125-217 196-292 (483)
119 1dxl_A Dihydrolipoamide dehydr 99.3 9.3E-13 3.2E-17 120.3 6.0 165 43-218 15-283 (470)
120 2x8g_A Thioredoxin glutathione 99.3 5.2E-13 1.8E-17 125.6 4.4 143 113-276 109-308 (598)
121 1v59_A Dihydrolipoamide dehydr 99.3 1.2E-12 4.2E-17 119.8 6.8 83 125-217 192-290 (478)
122 1fec_A Trypanothione reductase 99.3 7.3E-13 2.5E-17 121.8 5.0 83 125-217 196-291 (490)
123 2hqm_A GR, grase, glutathione 99.3 2.9E-12 9.9E-17 117.4 8.3 82 125-216 194-287 (479)
124 1xdi_A RV3303C-LPDA; reductase 99.3 2E-12 6.8E-17 119.1 7.1 84 125-218 191-283 (499)
125 1xhc_A NADH oxidase /nitrite r 99.3 4.5E-13 1.5E-17 118.7 2.4 160 43-216 17-236 (367)
126 2a8x_A Dihydrolipoyl dehydroge 99.3 3.4E-12 1.2E-16 116.4 7.8 164 43-218 12-275 (464)
127 2wpf_A Trypanothione reductase 99.3 1.2E-12 4.2E-17 120.4 4.9 83 125-217 200-295 (495)
128 1ojt_A Surface protein; redox- 99.3 1.5E-12 5.2E-17 119.4 5.3 83 125-217 194-289 (482)
129 3lzw_A Ferredoxin--NADP reduct 99.3 1.4E-12 4.9E-17 113.0 4.7 158 43-217 16-253 (332)
130 4b63_A L-ornithine N5 monooxyg 99.3 3.9E-12 1.3E-16 117.2 7.8 100 166-274 145-266 (501)
131 3r9u_A Thioredoxin reductase; 99.3 2.6E-12 8.7E-17 110.6 5.7 159 43-218 13-248 (315)
132 3sx6_A Sulfide-quinone reducta 99.3 4E-13 1.4E-17 121.7 0.6 145 115-273 8-174 (437)
133 3l8k_A Dihydrolipoyl dehydroge 99.3 1.9E-12 6.4E-17 118.3 3.9 160 43-217 13-275 (466)
134 3ab1_A Ferredoxin--NADP reduct 99.3 6.8E-12 2.3E-16 110.4 7.3 162 43-217 23-266 (360)
135 3f8d_A Thioredoxin reductase ( 99.3 1E-11 3.5E-16 107.1 8.3 154 43-216 24-253 (323)
136 3d1c_A Flavin-containing putat 99.3 8.1E-12 2.8E-16 110.0 7.6 169 43-216 13-274 (369)
137 1nhp_A NADH peroxidase; oxidor 99.3 2.4E-12 8.1E-17 116.9 4.2 164 43-217 9-249 (447)
138 4g6h_A Rotenone-insensitive NA 99.2 1E-12 3.5E-17 121.1 1.6 153 114-275 45-238 (502)
139 4eqs_A Coenzyme A disulfide re 99.2 9.4E-13 3.2E-17 119.3 1.3 164 43-217 9-243 (437)
140 2q7v_A Thioredoxin reductase; 99.2 2E-11 6.9E-16 105.8 8.9 157 43-217 17-252 (325)
141 3kd9_A Coenzyme A disulfide re 99.2 8.8E-12 3E-16 113.2 6.3 162 43-216 12-246 (449)
142 2q0l_A TRXR, thioredoxin reduc 99.2 2.3E-11 7.9E-16 104.7 8.1 157 43-217 10-244 (311)
143 1m6i_A Programmed cell death p 99.2 3.7E-13 1.3E-17 123.9 -3.5 149 112-275 12-201 (493)
144 2bc0_A NADH oxidase; flavoprot 99.2 7.4E-12 2.5E-16 115.0 5.0 190 17-217 11-294 (490)
145 3cty_A Thioredoxin reductase; 99.2 3.7E-11 1.3E-15 103.9 8.6 152 43-217 25-255 (319)
146 3lxd_A FAD-dependent pyridine 99.2 1.4E-11 4.6E-16 110.9 5.7 164 43-216 18-253 (415)
147 1vdc_A NTR, NADPH dependent th 99.2 3.3E-11 1.1E-15 104.7 7.3 159 43-217 17-262 (333)
148 2a87_A TRXR, TR, thioredoxin r 99.2 4.3E-11 1.5E-15 104.3 7.3 160 43-219 23-257 (335)
149 2cdu_A NADPH oxidase; flavoenz 99.2 2.1E-11 7.3E-16 110.8 5.4 164 43-217 9-250 (452)
150 3iwa_A FAD-dependent pyridine 99.2 2.9E-11 9.8E-16 110.5 6.2 83 125-216 168-260 (472)
151 3ntd_A FAD-dependent pyridine 99.1 1.2E-11 4.1E-16 115.5 3.5 82 125-216 160-269 (565)
152 3ef6_A Toluene 1,2-dioxygenase 99.1 6.4E-12 2.2E-16 112.9 1.3 163 43-216 11-243 (410)
153 4a9w_A Monooxygenase; baeyer-v 99.1 9E-11 3.1E-15 102.4 8.4 64 43-107 12-98 (357)
154 2v3a_A Rubredoxin reductase; a 99.1 6.2E-11 2.1E-15 105.4 7.2 162 43-216 13-245 (384)
155 3fg2_P Putative rubredoxin red 99.1 2.1E-11 7.3E-16 109.2 4.2 163 43-216 10-243 (404)
156 1fl2_A Alkyl hydroperoxide red 99.1 7.4E-11 2.5E-15 101.4 7.1 156 43-217 10-245 (310)
157 3h8l_A NADH oxidase; membrane 99.1 6.7E-12 2.3E-16 112.6 0.5 103 116-224 6-123 (409)
158 3fbs_A Oxidoreductase; structu 99.1 1.3E-10 4.4E-15 99.0 8.2 150 43-217 11-229 (297)
159 2gag_A Heterotetrameric sarcos 99.1 2.7E-11 9.3E-16 119.6 4.5 153 43-216 137-385 (965)
160 3ics_A Coenzyme A-disulfide re 99.1 3.3E-11 1.1E-15 113.1 4.7 162 43-216 45-284 (588)
161 3cgb_A Pyridine nucleotide-dis 99.1 2.4E-11 8.4E-16 111.3 3.2 80 127-216 197-284 (480)
162 1cjc_A Protein (adrenodoxin re 99.1 1.6E-10 5.3E-15 105.4 6.5 66 43-109 15-83 (460)
163 1hyu_A AHPF, alkyl hydroperoxi 99.0 2.5E-10 8.5E-15 105.6 7.0 156 43-217 221-456 (521)
164 2xve_A Flavin-containing monoo 99.0 4.6E-10 1.6E-14 102.4 8.2 33 43-76 11-49 (464)
165 1q1r_A Putidaredoxin reductase 99.0 2.5E-10 8.7E-15 103.1 6.0 83 125-216 158-252 (431)
166 1lqt_A FPRA; NADP+ derivative, 99.0 4.9E-10 1.7E-14 102.0 6.6 65 43-108 12-84 (456)
167 4fk1_A Putative thioredoxin re 99.0 5.6E-10 1.9E-14 95.9 6.4 151 43-212 15-235 (304)
168 2gqw_A Ferredoxin reductase; f 99.0 6E-10 2.1E-14 99.9 6.3 83 125-216 154-241 (408)
169 3h28_A Sulfide-quinone reducta 98.9 1.6E-11 5.6E-16 110.9 -4.9 144 116-273 7-167 (430)
170 3gwf_A Cyclohexanone monooxyge 98.9 9.5E-10 3.2E-14 102.1 6.0 107 43-150 17-212 (540)
171 3hyw_A Sulfide-quinone reducta 98.9 6E-12 2.1E-16 113.8 -9.2 132 115-263 6-151 (430)
172 3uox_A Otemo; baeyer-villiger 98.8 1.3E-08 4.4E-13 94.6 9.0 33 43-76 18-50 (545)
173 3s5w_A L-ornithine 5-monooxyge 98.8 3.4E-09 1.2E-13 96.3 4.8 28 43-71 39-71 (463)
174 4g6h_A Rotenone-insensitive NA 98.8 1.5E-09 5E-14 100.0 2.1 85 116-215 222-333 (502)
175 3vrd_B FCCB subunit, flavocyto 98.8 8E-10 2.7E-14 98.6 0.2 106 109-223 2-117 (401)
176 3h8l_A NADH oxidase; membrane 98.7 2.4E-09 8.2E-14 95.9 2.5 71 134-215 192-271 (409)
177 4ap3_A Steroid monooxygenase; 98.7 7.8E-09 2.7E-13 96.1 6.0 32 43-75 30-61 (549)
178 2gv8_A Monooxygenase; FMO, FAD 98.7 1.5E-08 5E-13 91.9 7.1 34 43-77 15-50 (447)
179 3h28_A Sulfide-quinone reducta 98.7 9.5E-10 3.2E-14 99.2 -1.0 78 129-212 161-255 (430)
180 1m6i_A Programmed cell death p 98.6 1.1E-08 3.8E-13 93.9 3.1 84 125-217 189-285 (493)
181 3fpz_A Thiazole biosynthetic e 98.6 9.8E-10 3.4E-14 95.5 -3.9 84 20-106 41-137 (326)
182 3sx6_A Sulfide-quinone reducta 98.6 9.1E-09 3.1E-13 93.0 1.9 162 43-212 13-268 (437)
183 2gqf_A Hypothetical protein HI 98.6 4.8E-09 1.6E-13 93.9 -0.7 95 113-212 6-167 (401)
184 2ywl_A Thioredoxin reductase r 98.6 2.5E-08 8.5E-13 78.8 3.4 95 115-216 5-112 (180)
185 3fpz_A Thiazole biosynthetic e 98.5 3.7E-11 1.3E-15 104.5 -15.3 135 110-274 66-203 (326)
186 1d4d_A Flavocytochrome C fumar 98.5 6.9E-08 2.4E-12 90.2 3.8 66 6-75 70-166 (572)
187 1y56_A Hypothetical protein PH 98.5 1.2E-07 4.1E-12 87.0 5.0 150 43-216 117-315 (493)
188 3hyw_A Sulfide-quinone reducta 98.4 1.6E-08 5.3E-13 91.3 -1.9 69 140-215 180-257 (430)
189 2bry_A NEDD9 interacting prote 98.3 2.5E-07 8.5E-12 85.0 3.9 103 2-108 34-189 (497)
190 2bry_A NEDD9 interacting prote 98.3 6.1E-07 2.1E-11 82.4 5.0 101 113-219 94-235 (497)
191 1rp0_A ARA6, thiazole biosynth 98.2 5.5E-07 1.9E-11 76.6 4.0 94 114-212 42-190 (284)
192 3v76_A Flavoprotein; structura 98.2 3.3E-07 1.1E-11 82.3 2.0 95 113-212 29-186 (417)
193 2cul_A Glucose-inhibited divis 98.2 5.6E-07 1.9E-11 74.2 3.0 101 114-221 6-132 (232)
194 3dme_A Conserved exported prot 98.1 4.1E-06 1.4E-10 73.0 7.2 48 165-212 149-208 (369)
195 3kkj_A Amine oxidase, flavin-c 98.1 3.8E-06 1.3E-10 69.1 5.9 62 43-105 11-82 (336)
196 3ces_A MNMG, tRNA uridine 5-ca 98.1 1.2E-06 4E-11 82.4 2.3 104 112-222 29-189 (651)
197 2xag_A Lysine-specific histone 98.0 1.4E-06 4.6E-11 84.8 2.5 68 4-74 231-317 (852)
198 3pvc_A TRNA 5-methylaminomethy 98.0 3.2E-06 1.1E-10 80.7 4.6 48 165-212 411-468 (689)
199 3vrd_B FCCB subunit, flavocyto 97.9 1E-07 3.4E-12 84.9 -7.0 68 140-215 183-259 (401)
200 3oz2_A Digeranylgeranylglycero 97.9 2E-06 6.8E-11 75.7 1.5 96 112-212 5-161 (397)
201 3nlc_A Uncharacterized protein 97.9 4.1E-06 1.4E-10 77.7 3.1 96 113-214 109-277 (549)
202 3ps9_A TRNA 5-methylaminomethy 97.9 1E-05 3.5E-10 77.0 6.0 48 165-212 416-472 (676)
203 2z3y_A Lysine-specific histone 97.9 3.5E-06 1.2E-10 80.0 2.6 70 2-74 58-146 (662)
204 1y56_B Sarcosine oxidase; dehy 97.9 1.9E-05 6.6E-10 69.4 7.1 48 165-212 148-204 (382)
205 4at0_A 3-ketosteroid-delta4-5a 97.9 4.5E-05 1.5E-09 70.1 9.8 31 43-74 50-80 (510)
206 3kkj_A Amine oxidase, flavin-c 97.9 5.5E-06 1.9E-10 68.1 3.1 37 114-155 5-41 (336)
207 1y0p_A Fumarate reductase flav 97.9 5.6E-06 1.9E-10 77.3 3.4 37 112-153 127-163 (571)
208 2gag_B Heterotetrameric sarcos 97.9 3.7E-05 1.3E-09 68.0 8.2 48 165-212 173-229 (405)
209 3alj_A 2-methyl-3-hydroxypyrid 97.8 8.8E-06 3E-10 71.7 3.5 95 113-212 13-159 (379)
210 3nyc_A D-arginine dehydrogenas 97.8 2.7E-05 9.1E-10 68.2 5.7 48 165-212 153-208 (381)
211 1ryi_A Glycine oxidase; flavop 97.8 1.2E-05 4.1E-10 70.7 3.3 35 111-150 17-51 (382)
212 2i0z_A NAD(FAD)-utilizing dehy 97.8 9.3E-06 3.2E-10 73.4 2.6 95 113-212 28-190 (447)
213 2gf3_A MSOX, monomeric sarcosi 97.7 7.2E-05 2.5E-09 65.7 8.2 48 165-212 149-204 (389)
214 3nix_A Flavoprotein/dehydrogen 97.7 7.7E-06 2.6E-10 73.0 1.8 95 113-212 7-165 (421)
215 1qo8_A Flavocytochrome C3 fuma 97.7 1.1E-05 3.9E-10 75.1 1.9 36 113-153 123-158 (566)
216 2oln_A NIKD protein; flavoprot 97.7 6.1E-05 2.1E-09 66.6 6.5 47 166-212 153-207 (397)
217 1w4x_A Phenylacetone monooxyge 97.7 2.1E-05 7.3E-10 72.9 3.4 33 43-76 25-57 (542)
218 2uzz_A N-methyl-L-tryptophan o 97.6 4.2E-05 1.4E-09 66.9 4.6 48 165-212 148-203 (372)
219 3cgv_A Geranylgeranyl reductas 97.6 1.8E-05 6.2E-10 69.8 1.5 95 113-212 6-161 (397)
220 3qj4_A Renalase; FAD/NAD(P)-bi 97.5 1.9E-05 6.6E-10 68.5 1.5 35 115-154 5-42 (342)
221 3e1t_A Halogenase; flavoprotei 97.5 3.9E-05 1.3E-09 70.5 2.9 95 113-212 9-171 (512)
222 3ihg_A RDME; flavoenzyme, anth 97.5 6.9E-05 2.4E-09 69.2 4.4 34 113-151 7-40 (535)
223 3atr_A Conserved archaeal prot 97.5 3.7E-05 1.3E-09 69.5 2.3 95 113-212 8-161 (453)
224 2x3n_A Probable FAD-dependent 97.5 5.1E-05 1.7E-09 67.2 2.9 95 113-212 8-165 (399)
225 1c0p_A D-amino acid oxidase; a 97.4 0.00042 1.4E-08 60.4 8.8 45 164-212 140-184 (363)
226 3c4a_A Probable tryptophan hyd 97.4 6.2E-05 2.1E-09 66.4 3.2 91 115-212 4-142 (381)
227 2zxi_A TRNA uridine 5-carboxym 97.4 2.8E-05 9.4E-10 72.9 0.9 104 112-222 28-188 (637)
228 1yvv_A Amine oxidase, flavin-c 97.4 5.9E-05 2E-09 64.9 3.0 36 114-154 5-40 (336)
229 3dje_A Fructosyl amine: oxygen 97.4 0.00032 1.1E-08 62.8 7.8 51 165-215 160-223 (438)
230 2gqf_A Hypothetical protein HI 97.4 0.00015 5.1E-09 64.6 5.6 28 43-71 13-40 (401)
231 1k0i_A P-hydroxybenzoate hydro 97.4 5.8E-05 2E-09 66.7 2.7 94 114-212 5-162 (394)
232 2qa1_A PGAE, polyketide oxygen 97.4 6.1E-05 2.1E-09 69.1 2.5 104 104-212 4-164 (500)
233 3jsk_A Cypbp37 protein; octame 97.4 9.5E-05 3.3E-09 64.3 3.5 72 113-189 81-184 (344)
234 2gjc_A Thiazole biosynthetic e 97.4 5.1E-05 1.8E-09 65.5 1.8 73 113-190 67-171 (326)
235 3fmw_A Oxygenase; mithramycin, 97.4 6.3E-05 2.1E-09 70.1 2.4 95 113-212 51-206 (570)
236 3rp8_A Flavoprotein monooxygen 97.3 9.3E-05 3.2E-09 65.7 2.8 37 110-151 22-58 (407)
237 2e5v_A L-aspartate oxidase; ar 97.3 0.0001 3.5E-09 67.1 2.9 28 116-148 4-31 (472)
238 4dgk_A Phytoene dehydrogenase; 97.3 8.3E-05 2.8E-09 67.8 1.9 32 43-75 10-41 (501)
239 3i3l_A Alkylhalidase CMLS; fla 97.2 9E-05 3.1E-09 69.4 1.9 95 113-212 25-187 (591)
240 3g3e_A D-amino-acid oxidase; F 97.2 0.0016 5.5E-08 56.3 9.7 46 164-212 140-185 (351)
241 3cp8_A TRNA uridine 5-carboxym 97.1 0.00011 3.8E-09 69.0 1.5 33 112-149 22-54 (641)
242 4gde_A UDP-galactopyranose mut 97.1 0.00015 5.3E-09 66.1 2.3 32 43-75 19-51 (513)
243 3axb_A Putative oxidoreductase 97.1 0.00025 8.6E-09 63.7 3.6 28 43-71 32-60 (448)
244 2qa2_A CABE, polyketide oxygen 97.1 0.00013 4.6E-09 66.8 1.8 98 110-212 11-165 (499)
245 2gmh_A Electron transfer flavo 97.1 0.00015 5E-09 67.9 2.0 36 112-152 36-77 (584)
246 2e1m_A L-glutamate oxidase; L- 97.1 0.0002 6.7E-09 63.2 2.4 70 5-75 4-85 (376)
247 2gjc_A Thiazole biosynthetic e 97.1 0.0003 1E-08 60.7 3.4 92 11-104 6-135 (326)
248 2vou_A 2,6-dihydroxypyridine h 97.0 0.00016 5.4E-09 64.1 1.1 33 114-151 8-40 (397)
249 1pj5_A N,N-dimethylglycine oxi 97.0 0.0011 3.8E-08 64.5 6.9 49 164-212 149-206 (830)
250 3k7m_X 6-hydroxy-L-nicotine ox 97.0 0.00027 9.3E-09 63.0 2.4 32 43-75 10-41 (431)
251 3v76_A Flavoprotein; structura 97.0 0.00079 2.7E-08 60.2 5.4 29 43-72 36-64 (417)
252 3c4n_A Uncharacterized protein 97.0 0.00021 7.2E-09 63.5 1.6 32 113-149 38-71 (405)
253 2qcu_A Aerobic glycerol-3-phos 96.9 0.00031 1.1E-08 64.3 2.5 32 113-149 5-36 (501)
254 2ywl_A Thioredoxin reductase r 96.9 0.0012 4E-08 51.5 5.5 64 43-108 10-78 (180)
255 2bs2_A Quinol-fumarate reducta 96.9 0.0046 1.6E-07 58.5 10.5 27 43-70 14-40 (660)
256 3da1_A Glycerol-3-phosphate de 96.9 0.00047 1.6E-08 64.1 3.5 34 112-150 19-52 (561)
257 2xdo_A TETX2 protein; tetracyc 96.9 0.00034 1.2E-08 61.9 2.2 33 113-150 28-60 (398)
258 4gde_A UDP-galactopyranose mut 96.8 0.0001 3.5E-09 67.3 -1.6 41 111-156 10-51 (513)
259 3nrn_A Uncharacterized protein 96.8 0.00048 1.7E-08 61.3 2.7 32 43-75 9-40 (421)
260 2h88_A Succinate dehydrogenase 96.8 0.00042 1.4E-08 65.2 2.2 29 43-72 27-55 (621)
261 4dgk_A Phytoene dehydrogenase; 96.8 0.00013 4.3E-09 66.6 -1.4 34 116-154 6-39 (501)
262 1rp0_A ARA6, thiazole biosynth 96.7 0.0022 7.5E-08 54.1 6.1 30 43-73 48-78 (284)
263 2b9w_A Putative aminooxidase; 96.7 0.0006 2E-08 60.7 2.7 32 43-75 15-47 (424)
264 2bcg_G Secretory pathway GDP d 96.7 0.00063 2.2E-08 61.4 2.7 32 43-75 20-51 (453)
265 3ihm_A Styrene monooxygenase A 96.7 0.0014 4.7E-08 58.8 4.8 31 114-149 25-55 (430)
266 3ka7_A Oxidoreductase; structu 96.7 0.00064 2.2E-08 60.4 2.4 32 43-75 9-40 (425)
267 3oz2_A Digeranylgeranylglycero 96.6 0.00078 2.7E-08 58.8 2.7 28 43-71 13-40 (397)
268 1i8t_A UDP-galactopyranose mut 96.5 0.001 3.5E-08 58.4 2.7 32 43-75 10-41 (367)
269 1rsg_A FMS1 protein; FAD bindi 96.5 0.0009 3.1E-08 61.4 2.3 31 43-74 17-48 (516)
270 1kf6_A Fumarate reductase flav 96.5 0.00085 2.9E-08 62.9 2.1 34 113-151 7-42 (602)
271 1s3e_A Amine oxidase [flavin-c 96.5 0.00094 3.2E-08 61.3 2.4 32 43-75 13-44 (520)
272 1v0j_A UDP-galactopyranose mut 96.5 0.00091 3.1E-08 59.4 2.2 32 43-75 16-48 (399)
273 2yg5_A Putrescine oxidase; oxi 96.5 0.0011 3.6E-08 59.6 2.7 59 43-104 14-81 (453)
274 4b63_A L-ornithine N5 monooxyg 96.4 0.0018 6.2E-08 59.2 3.6 19 198-217 394-412 (501)
275 3hdq_A UDP-galactopyranose mut 96.4 0.0014 4.8E-08 58.1 2.6 32 43-75 38-69 (397)
276 3nks_A Protoporphyrinogen oxid 96.3 0.0014 4.7E-08 59.2 2.5 32 43-75 11-44 (477)
277 2jae_A L-amino acid oxidase; o 96.3 0.0017 6E-08 58.9 3.0 31 43-74 20-50 (489)
278 2vvm_A Monoamine oxidase N; FA 96.3 0.0014 4.6E-08 59.7 2.2 31 43-74 48-78 (495)
279 2bcg_G Secretory pathway GDP d 96.3 0.00055 1.9E-08 61.8 -0.6 39 113-156 13-51 (453)
280 2ivd_A PPO, PPOX, protoporphyr 96.3 0.0015 5.2E-08 59.0 2.4 32 43-75 25-56 (478)
281 3lk7_A UDP-N-acetylmuramoylala 96.3 0.0043 1.5E-07 56.0 5.3 80 109-219 9-89 (451)
282 1sez_A Protoporphyrinogen oxid 96.2 0.0019 6.5E-08 58.8 2.8 31 43-74 22-52 (504)
283 2bi7_A UDP-galactopyranose mut 96.2 0.002 6.8E-08 56.9 2.7 32 43-75 12-43 (384)
284 2b9w_A Putative aminooxidase; 96.2 0.00061 2.1E-08 60.6 -0.9 38 113-155 8-46 (424)
285 3ka7_A Oxidoreductase; structu 96.2 0.00066 2.3E-08 60.3 -0.7 34 115-153 4-37 (425)
286 3nrn_A Uncharacterized protein 96.1 0.0009 3.1E-08 59.5 -0.3 34 115-153 4-37 (421)
287 1rsg_A FMS1 protein; FAD bindi 96.1 0.00069 2.4E-08 62.2 -1.1 37 113-154 10-47 (516)
288 4hb9_A Similarities with proba 96.0 0.00094 3.2E-08 58.7 -0.5 34 113-151 3-36 (412)
289 3nlc_A Uncharacterized protein 96.0 0.007 2.4E-07 56.0 5.3 27 43-70 116-142 (549)
290 2e1m_A L-glutamate oxidase; L- 96.0 0.00093 3.2E-08 58.9 -0.6 39 113-156 46-85 (376)
291 3i6d_A Protoporphyrinogen oxid 96.0 0.0018 6.3E-08 58.1 1.3 31 43-74 14-50 (470)
292 2jae_A L-amino acid oxidase; o 95.9 0.0011 3.8E-08 60.1 -0.4 38 113-155 13-50 (489)
293 3hdq_A UDP-galactopyranose mut 95.9 0.00096 3.3E-08 59.2 -0.8 40 112-156 30-69 (397)
294 3k7m_X 6-hydroxy-L-nicotine ox 95.9 0.00096 3.3E-08 59.4 -0.8 35 114-153 4-38 (431)
295 2iid_A L-amino-acid oxidase; f 95.9 0.0026 8.9E-08 57.9 2.0 31 43-74 42-72 (498)
296 1s3e_A Amine oxidase [flavin-c 95.9 0.001 3.4E-08 61.1 -0.8 37 114-155 7-43 (520)
297 1v0j_A UDP-galactopyranose mut 95.9 0.00085 2.9E-08 59.6 -1.4 39 113-156 9-48 (399)
298 1yvv_A Amine oxidase, flavin-c 95.9 0.0038 1.3E-07 53.4 2.7 32 43-75 11-42 (336)
299 2bi7_A UDP-galactopyranose mut 95.8 0.0012 4E-08 58.4 -0.6 39 113-156 5-43 (384)
300 4dsg_A UDP-galactopyranose mut 95.8 0.0037 1.3E-07 56.9 2.5 33 43-76 18-51 (484)
301 2cul_A Glucose-inhibited divis 95.7 0.012 4.1E-07 47.9 5.2 59 43-104 12-88 (232)
302 3qj4_A Renalase; FAD/NAD(P)-bi 95.7 0.004 1.4E-07 53.7 2.4 32 43-75 10-44 (342)
303 2vvm_A Monoamine oxidase N; FA 95.7 0.0013 4.3E-08 59.9 -0.9 38 113-155 41-78 (495)
304 1d5t_A Guanine nucleotide diss 95.7 0.0046 1.6E-07 55.4 2.6 32 43-75 15-46 (433)
305 2yg5_A Putrescine oxidase; oxi 95.7 0.0013 4.6E-08 58.9 -1.0 37 114-155 8-44 (453)
306 3rp8_A Flavoprotein monooxygen 95.6 0.0058 2E-07 54.0 3.0 47 24-71 6-59 (407)
307 1i8t_A UDP-galactopyranose mut 95.6 0.0015 5.3E-08 57.2 -0.8 37 114-155 4-40 (367)
308 3nks_A Protoporphyrinogen oxid 95.6 0.0019 6.4E-08 58.3 -0.4 36 115-155 6-43 (477)
309 3lov_A Protoporphyrinogen oxid 95.5 0.0046 1.6E-07 55.8 2.1 31 43-74 13-45 (475)
310 2ivd_A PPO, PPOX, protoporphyr 95.5 0.0019 6.5E-08 58.4 -0.7 36 114-154 19-54 (478)
311 1y0p_A Fumarate reductase flav 95.5 0.0064 2.2E-07 56.5 2.9 32 43-75 135-166 (571)
312 3eag_A UDP-N-acetylmuramate:L- 95.5 0.0084 2.9E-07 51.6 3.4 73 116-219 9-83 (326)
313 3dme_A Conserved exported prot 95.4 0.002 6.7E-08 55.8 -0.7 35 113-152 6-40 (369)
314 3cgv_A Geranylgeranyl reductas 95.3 0.0075 2.6E-07 52.8 2.7 29 43-72 13-41 (397)
315 1sez_A Protoporphyrinogen oxid 95.3 0.0028 9.5E-08 57.7 -0.1 37 114-155 16-52 (504)
316 4hb9_A Similarities with proba 95.3 0.0082 2.8E-07 52.6 2.8 27 43-70 10-36 (412)
317 3i6d_A Protoporphyrinogen oxid 95.2 0.0017 5.8E-08 58.3 -1.9 35 114-153 8-48 (470)
318 4dsg_A UDP-galactopyranose mut 95.0 0.0027 9.4E-08 57.8 -1.0 39 114-157 12-51 (484)
319 3fwz_A Inner membrane protein 95.0 0.0093 3.2E-07 44.5 2.0 71 116-212 12-82 (140)
320 3jsk_A Cypbp37 protein; octame 95.0 0.0089 3E-07 51.8 2.1 32 43-75 88-121 (344)
321 2iid_A L-amino-acid oxidase; f 95.0 0.0031 1.1E-07 57.3 -0.9 39 110-155 34-72 (498)
322 1b37_A Protein (polyamine oxid 95.0 0.0095 3.3E-07 53.8 2.3 32 43-75 13-45 (472)
323 3p1w_A Rabgdi protein; GDI RAB 94.9 0.011 3.8E-07 53.6 2.7 32 43-75 29-60 (475)
324 2i0z_A NAD(FAD)-utilizing dehy 94.9 0.012 4.1E-07 52.9 2.7 29 43-72 35-63 (447)
325 1qo8_A Flavocytochrome C3 fuma 94.8 0.011 3.7E-07 54.8 2.4 31 43-74 130-160 (566)
326 4at0_A 3-ketosteroid-delta4-5a 94.8 0.0037 1.3E-07 57.3 -0.9 38 111-153 41-78 (510)
327 2z3y_A Lysine-specific histone 94.7 0.0048 1.6E-07 58.4 -0.4 38 113-155 109-146 (662)
328 1d5t_A Guanine nucleotide diss 94.7 0.0047 1.6E-07 55.4 -0.5 38 113-155 8-45 (433)
329 2xag_A Lysine-specific histone 94.6 0.0056 1.9E-07 59.5 -0.3 37 114-155 281-317 (852)
330 3dje_A Fructosyl amine: oxygen 94.5 0.0049 1.7E-07 55.0 -0.9 35 113-152 8-43 (438)
331 3alj_A 2-methyl-3-hydroxypyrid 94.5 0.02 6.8E-07 50.0 3.0 28 43-71 20-47 (379)
332 4hv4_A UDP-N-acetylmuramate--L 94.4 0.047 1.6E-06 49.8 5.6 75 110-219 23-98 (494)
333 2oln_A NIKD protein; flavoprot 94.4 0.0049 1.7E-07 54.2 -1.0 34 113-151 6-39 (397)
334 1ryi_A Glycine oxidase; flavop 94.3 0.022 7.5E-07 49.5 2.9 48 165-212 163-218 (382)
335 3c4a_A Probable tryptophan hyd 94.3 0.026 8.8E-07 49.4 3.4 27 43-70 9-37 (381)
336 2uzz_A N-methyl-L-tryptophan o 94.2 0.0061 2.1E-07 52.9 -0.8 33 114-151 5-37 (372)
337 3pl8_A Pyranose 2-oxidase; sub 94.1 0.023 8E-07 53.3 2.9 31 43-74 55-85 (623)
338 3lov_A Protoporphyrinogen oxid 94.1 0.0066 2.2E-07 54.8 -1.0 35 114-153 7-43 (475)
339 4gut_A Lysine-specific histone 94.1 0.021 7.3E-07 55.0 2.5 30 43-73 345-374 (776)
340 2xdo_A TETX2 protein; tetracyc 94.0 0.026 8.8E-07 49.6 2.9 28 43-71 35-62 (398)
341 3c96_A Flavin-containing monoo 94.0 0.0066 2.3E-07 53.7 -1.0 33 114-151 7-40 (410)
342 2gf3_A MSOX, monomeric sarcosi 93.9 0.0074 2.5E-07 52.7 -0.8 34 114-152 6-39 (389)
343 3nyc_A D-arginine dehydrogenas 93.9 0.0082 2.8E-07 52.1 -0.6 35 110-152 10-44 (381)
344 3p1w_A Rabgdi protein; GDI RAB 93.9 0.0084 2.9E-07 54.4 -0.7 39 112-155 21-59 (475)
345 1b37_A Protein (polyamine oxid 93.8 0.0072 2.4E-07 54.6 -1.2 37 114-155 7-44 (472)
346 3ihm_A Styrene monooxygenase A 93.8 0.023 7.9E-07 50.7 2.2 25 43-68 31-55 (430)
347 2gmh_A Electron transfer flavo 93.8 0.026 8.9E-07 52.6 2.5 30 43-73 44-79 (584)
348 3nix_A Flavoprotein/dehydrogen 93.7 0.035 1.2E-06 49.0 3.0 25 43-68 14-38 (421)
349 3ayj_A Pro-enzyme of L-phenyla 93.7 0.024 8.1E-07 54.0 2.0 27 43-70 65-100 (721)
350 1c0p_A D-amino acid oxidase; a 93.6 0.01 3.5E-07 51.5 -0.6 32 113-149 8-39 (363)
351 1y56_B Sarcosine oxidase; dehy 93.5 0.01 3.6E-07 51.7 -0.6 32 113-149 7-38 (382)
352 2x3n_A Probable FAD-dependent 93.5 0.037 1.3E-06 48.5 2.8 27 43-70 15-41 (399)
353 3c96_A Flavin-containing monoo 93.4 0.037 1.3E-06 48.8 2.8 28 43-71 13-41 (410)
354 3llv_A Exopolyphosphatase-rela 93.4 0.029 1E-06 41.5 1.8 69 116-211 11-80 (141)
355 3da1_A Glycerol-3-phosphate de 93.4 0.036 1.2E-06 51.3 2.7 31 43-74 27-57 (561)
356 2r0c_A REBC; flavin adenine di 93.4 0.01 3.6E-07 54.8 -0.9 34 113-151 28-61 (549)
357 3ps9_A TRNA 5-methylaminomethy 93.3 0.013 4.6E-07 55.4 -0.3 35 113-152 274-308 (676)
358 3pvc_A TRNA 5-methylaminomethy 93.3 0.013 4.6E-07 55.6 -0.4 35 113-152 266-300 (689)
359 2vou_A 2,6-dihydroxypyridine h 93.2 0.04 1.4E-06 48.4 2.6 27 43-70 14-40 (397)
360 3g5s_A Methylenetetrahydrofola 93.1 0.049 1.7E-06 48.2 2.9 25 43-68 10-34 (443)
361 2e5v_A L-aspartate oxidase; ar 93.1 0.045 1.5E-06 49.5 2.8 30 43-74 8-37 (472)
362 1k0i_A P-hydroxybenzoate hydro 93.1 0.035 1.2E-06 48.6 2.1 26 43-69 11-36 (394)
363 2gag_B Heterotetrameric sarcos 93.1 0.011 3.8E-07 51.9 -1.2 35 111-150 21-57 (405)
364 3atr_A Conserved archaeal prot 93.1 0.038 1.3E-06 49.6 2.3 26 43-69 15-40 (453)
365 3e1t_A Halogenase; flavoprotei 93.0 0.051 1.7E-06 49.6 3.0 25 43-68 16-40 (512)
366 2qa1_A PGAE, polyketide oxygen 92.9 0.048 1.6E-06 49.7 2.7 28 43-71 20-47 (500)
367 2x5o_A UDP-N-acetylmuramoylala 92.9 0.023 7.8E-07 51.0 0.6 73 116-220 10-82 (439)
368 2r0c_A REBC; flavin adenine di 92.9 0.053 1.8E-06 50.0 3.0 28 43-71 35-62 (549)
369 2qa2_A CABE, polyketide oxygen 92.9 0.05 1.7E-06 49.6 2.8 28 43-71 21-48 (499)
370 3ihg_A RDME; flavoenzyme, anth 92.8 0.051 1.7E-06 49.8 2.8 28 43-71 14-41 (535)
371 3pl8_A Pyranose 2-oxidase; sub 92.8 0.016 5.6E-07 54.4 -0.5 38 113-155 48-85 (623)
372 2wdq_A Succinate dehydrogenase 92.7 0.041 1.4E-06 51.3 2.0 28 43-71 16-43 (588)
373 1chu_A Protein (L-aspartate ox 92.6 0.057 2E-06 49.7 2.8 30 43-74 17-46 (540)
374 1d4d_A Flavocytochrome C fumar 92.3 0.019 6.5E-07 53.3 -0.8 35 114-153 129-163 (572)
375 4gut_A Lysine-specific histone 92.3 0.02 6.7E-07 55.2 -0.7 36 113-153 338-373 (776)
376 2dkh_A 3-hydroxybenzoate hydro 92.3 0.021 7E-07 53.8 -0.6 35 112-151 33-68 (639)
377 2qcu_A Aerobic glycerol-3-phos 92.2 0.07 2.4E-06 48.6 2.8 49 164-212 147-209 (501)
378 3fmw_A Oxygenase; mithramycin, 92.1 0.075 2.6E-06 49.3 2.9 28 43-71 58-85 (570)
379 1lss_A TRK system potassium up 92.0 0.059 2E-06 39.4 1.8 31 114-149 7-37 (140)
380 2aqj_A Tryptophan halogenase, 92.0 0.023 7.8E-07 52.3 -0.6 31 114-149 8-41 (538)
381 3axb_A Putative oxidoreductase 91.9 0.014 4.8E-07 52.2 -2.1 30 113-147 25-55 (448)
382 3g5s_A Methylenetetrahydrofola 91.9 0.023 7.9E-07 50.2 -0.7 29 116-149 6-34 (443)
383 3l4b_C TRKA K+ channel protien 91.9 0.04 1.4E-06 44.2 0.7 30 115-149 4-33 (218)
384 3i3l_A Alkylhalidase CMLS; fla 91.9 0.084 2.9E-06 49.2 3.0 27 43-70 32-58 (591)
385 2rgh_A Alpha-glycerophosphate 91.5 0.029 9.8E-07 52.1 -0.6 32 114-150 35-66 (571)
386 1chu_A Protein (L-aspartate ox 91.5 0.027 9.3E-07 51.9 -0.8 34 113-152 10-43 (540)
387 3c4n_A Uncharacterized protein 91.3 0.092 3.2E-06 46.3 2.5 48 165-212 171-235 (405)
388 2pyx_A Tryptophan halogenase; 91.2 0.025 8.4E-07 51.9 -1.3 31 114-149 10-52 (526)
389 3g3e_A D-amino-acid oxidase; F 90.9 0.025 8.7E-07 48.7 -1.5 32 115-151 4-41 (351)
390 2wdq_A Succinate dehydrogenase 90.9 0.035 1.2E-06 51.7 -0.6 34 113-151 9-42 (588)
391 2zxi_A TRNA uridine 5-carboxym 90.9 0.095 3.2E-06 49.1 2.2 28 43-71 36-64 (637)
392 2rgh_A Alpha-glycerophosphate 90.8 0.12 3.9E-06 48.0 2.8 30 43-73 41-70 (571)
393 3dfz_A SIRC, precorrin-2 dehyd 90.8 0.16 5.3E-06 41.2 3.2 72 109-212 31-102 (223)
394 3cp8_A TRNA uridine 5-carboxym 90.8 0.097 3.3E-06 49.1 2.2 29 43-72 30-59 (641)
395 2dkh_A 3-hydroxybenzoate hydro 90.7 0.12 4.1E-06 48.6 2.8 28 43-71 41-69 (639)
396 2bs2_A Quinol-fumarate reducta 90.7 0.037 1.3E-06 52.3 -0.7 34 113-151 7-40 (660)
397 2g1u_A Hypothetical protein TM 90.6 0.043 1.5E-06 41.5 -0.3 31 115-150 23-53 (155)
398 2e4g_A Tryptophan halogenase; 90.5 0.043 1.5E-06 50.6 -0.4 31 114-149 28-61 (550)
399 1pn0_A Phenol 2-monooxygenase; 90.5 0.035 1.2E-06 52.5 -1.0 33 113-150 10-47 (665)
400 3ces_A MNMG, tRNA uridine 5-ca 90.5 0.11 3.6E-06 49.0 2.2 28 43-71 37-65 (651)
401 3c85_A Putative glutathione-re 90.3 0.073 2.5E-06 41.3 0.8 71 115-212 43-116 (183)
402 4g65_A TRK system potassium up 90.2 0.092 3.2E-06 47.4 1.5 34 112-150 4-37 (461)
403 3l9w_A Glutathione-regulated p 89.8 0.077 2.6E-06 47.2 0.7 72 114-211 7-78 (413)
404 2h88_A Succinate dehydrogenase 89.8 0.049 1.7E-06 51.1 -0.6 34 113-151 20-53 (621)
405 3lk7_A UDP-N-acetylmuramoylala 89.8 0.25 8.6E-06 44.3 4.1 47 43-107 18-64 (451)
406 2weu_A Tryptophan 5-halogenase 89.8 0.033 1.1E-06 50.8 -1.8 30 115-149 6-38 (511)
407 3hn7_A UDP-N-acetylmuramate-L- 89.7 0.3 1E-05 44.7 4.6 73 116-219 24-97 (524)
408 1id1_A Putative potassium chan 89.6 0.16 5.5E-06 38.1 2.2 75 116-212 8-82 (153)
409 3oj0_A Glutr, glutamyl-tRNA re 89.5 0.22 7.6E-06 36.9 3.0 34 109-149 21-54 (144)
410 1pj5_A N,N-dimethylglycine oxi 89.1 0.055 1.9E-06 52.5 -0.9 33 113-150 6-39 (830)
411 2aqj_A Tryptophan halogenase, 88.6 0.23 7.9E-06 45.5 3.0 25 43-68 14-41 (538)
412 1kf6_A Fumarate reductase flav 88.6 0.14 4.9E-06 47.8 1.6 28 43-71 14-43 (602)
413 3ayj_A Pro-enzyme of L-phenyla 88.6 0.049 1.7E-06 51.8 -1.6 33 114-151 59-100 (721)
414 2pyx_A Tryptophan halogenase; 88.1 0.22 7.7E-06 45.5 2.6 46 166-212 175-232 (526)
415 2weu_A Tryptophan 5-halogenase 87.8 0.17 5.8E-06 45.9 1.5 25 43-68 11-38 (511)
416 1jnr_A Adenylylsulfate reducta 87.6 0.29 9.8E-06 46.1 2.9 26 43-69 31-60 (643)
417 2e4g_A Tryptophan halogenase; 87.4 0.26 8.9E-06 45.3 2.5 46 166-212 194-251 (550)
418 1ju2_A HydroxynitrIle lyase; f 87.3 0.12 4.1E-06 47.5 0.2 34 112-151 27-60 (536)
419 1kdg_A CDH, cellobiose dehydro 87.2 0.085 2.9E-06 48.5 -0.9 32 113-149 9-40 (546)
420 3t37_A Probable dehydrogenase; 87.0 0.088 3E-06 48.0 -0.9 35 111-150 17-52 (526)
421 1pn0_A Phenol 2-monooxygenase; 86.9 0.32 1.1E-05 46.0 2.9 27 43-70 17-48 (665)
422 3gyx_A Adenylylsulfate reducta 85.8 0.35 1.2E-05 45.6 2.5 26 43-69 31-62 (662)
423 2hmt_A YUAA protein; RCK, KTN, 85.3 0.2 6.9E-06 36.6 0.5 29 116-149 11-39 (144)
424 3eag_A UDP-N-acetylmuramate:L- 85.0 0.89 3E-05 38.8 4.5 45 43-107 13-58 (326)
425 1jnr_A Adenylylsulfate reducta 84.8 0.14 4.9E-06 48.2 -0.7 33 113-150 24-60 (643)
426 3ego_A Probable 2-dehydropanto 84.0 0.47 1.6E-05 40.1 2.3 72 114-212 5-78 (307)
427 1vg0_A RAB proteins geranylger 83.7 0.17 6E-06 47.5 -0.6 41 111-156 8-48 (650)
428 3ic5_A Putative saccharopine d 83.6 0.62 2.1E-05 32.5 2.5 29 116-149 10-39 (118)
429 3i83_A 2-dehydropantoate 2-red 83.6 0.76 2.6E-05 39.0 3.4 31 114-149 5-35 (320)
430 3gyx_A Adenylylsulfate reducta 83.0 0.15 5.2E-06 48.1 -1.3 32 113-149 24-61 (662)
431 3ojo_A CAP5O; rossmann fold, c 82.7 0.9 3.1E-05 40.5 3.6 36 109-151 11-46 (431)
432 3q9t_A Choline dehydrogenase a 82.5 0.2 6.7E-06 46.6 -0.8 35 111-150 6-41 (577)
433 3hn2_A 2-dehydropantoate 2-red 82.2 1.4 4.7E-05 37.2 4.5 31 114-149 5-35 (312)
434 1pjq_A CYSG, siroheme synthase 81.7 1 3.4E-05 40.5 3.6 33 109-148 12-44 (457)
435 1n4w_A CHOD, cholesterol oxida 80.7 0.24 8.2E-06 45.1 -0.9 34 113-151 7-40 (504)
436 2ew2_A 2-dehydropantoate 2-red 80.5 0.94 3.2E-05 37.9 2.9 31 114-149 6-36 (316)
437 2aef_A Calcium-gated potassium 80.4 0.42 1.4E-05 38.5 0.6 29 116-150 14-42 (234)
438 2x5o_A UDP-N-acetylmuramoylala 80.0 0.67 2.3E-05 41.3 1.9 26 43-69 14-39 (439)
439 3fim_B ARYL-alcohol oxidase; A 79.4 0.46 1.6E-05 43.9 0.6 33 114-151 5-38 (566)
440 1coy_A Cholesterol oxidase; ox 78.4 0.33 1.1E-05 44.2 -0.7 34 112-150 12-45 (507)
441 3qvp_A Glucose oxidase; oxidor 78.0 0.34 1.2E-05 45.0 -0.8 34 111-149 19-53 (583)
442 1kdg_A CDH, cellobiose dehydro 77.6 1.1 3.7E-05 41.0 2.5 26 43-69 16-41 (546)
443 4dll_A 2-hydroxy-3-oxopropiona 76.5 2.3 7.7E-05 36.1 4.1 32 113-149 33-64 (320)
444 1pzg_A LDH, lactate dehydrogen 76.5 1.8 6.2E-05 37.0 3.4 33 113-150 11-44 (331)
445 3hwr_A 2-dehydropantoate 2-red 76.3 1.7 5.7E-05 36.8 3.2 30 114-149 22-51 (318)
446 2h78_A Hibadh, 3-hydroxyisobut 75.7 2.3 7.8E-05 35.5 3.8 31 114-149 6-36 (302)
447 3g79_A NDP-N-acetyl-D-galactos 75.3 2.6 8.9E-05 38.0 4.3 32 114-150 21-54 (478)
448 2f00_A UDP-N-acetylmuramate--L 75.0 4.5 0.00015 36.5 5.8 65 116-212 24-89 (491)
449 1n4w_A CHOD, cholesterol oxida 75.0 1.6 5.6E-05 39.5 2.9 28 43-71 14-41 (504)
450 1p3d_A UDP-N-acetylmuramate--a 74.9 4.2 0.00014 36.5 5.6 65 116-212 23-88 (475)
451 1gpe_A Protein (glucose oxidas 74.7 0.45 1.6E-05 44.2 -0.9 34 112-150 25-59 (587)
452 3ghy_A Ketopantoate reductase 74.7 1.1 3.7E-05 38.3 1.6 30 114-148 6-35 (335)
453 3q9t_A Choline dehydrogenase a 73.7 1.8 6.3E-05 40.0 3.0 26 43-69 15-41 (577)
454 4a7p_A UDP-glucose dehydrogena 73.5 2 6.7E-05 38.5 3.0 34 113-151 10-43 (446)
455 2izz_A Pyrroline-5-carboxylate 73.5 1.3 4.4E-05 37.7 1.7 47 98-149 9-59 (322)
456 2jbv_A Choline oxidase; alcoho 73.1 0.54 1.9E-05 43.2 -0.8 34 112-150 14-48 (546)
457 1lnq_A MTHK channels, potassiu 72.4 0.98 3.4E-05 38.5 0.7 30 115-150 119-148 (336)
458 1vpd_A Tartronate semialdehyde 72.3 3.2 0.00011 34.4 3.9 31 114-149 8-38 (299)
459 2gf2_A Hibadh, 3-hydroxyisobut 71.3 3.6 0.00012 34.1 4.0 29 116-149 5-33 (296)
460 1ju2_A HydroxynitrIle lyase; f 70.2 1.9 6.6E-05 39.4 2.2 26 43-70 35-60 (536)
461 1bg6_A N-(1-D-carboxylethyl)-L 69.8 2.6 8.8E-05 36.0 2.9 31 114-149 7-37 (359)
462 3g0o_A 3-hydroxyisobutyrate de 69.5 2 6.7E-05 36.1 2.0 31 114-149 10-40 (303)
463 3phh_A Shikimate dehydrogenase 68.9 4.1 0.00014 33.7 3.7 35 109-150 118-152 (269)
464 3gg2_A Sugar dehydrogenase, UD 68.8 1.4 4.9E-05 39.4 1.0 32 114-150 5-36 (450)
465 3ce6_A Adenosylhomocysteinase; 68.2 3.8 0.00013 37.1 3.7 67 109-212 274-340 (494)
466 3t7c_A Carveol dehydrogenase; 67.8 14 0.00047 30.6 6.9 88 116-212 33-128 (299)
467 4hv4_A UDP-N-acetylmuramate--L 67.7 6.4 0.00022 35.5 5.1 25 43-68 31-56 (494)
468 3c85_A Putative glutathione-re 67.4 4 0.00014 31.1 3.2 24 252-275 37-60 (183)
469 3cky_A 2-hydroxymethyl glutara 66.6 4.7 0.00016 33.4 3.8 31 114-149 7-37 (301)
470 1jw9_B Molybdopterin biosynthe 65.9 3.5 0.00012 33.5 2.8 29 116-149 36-65 (249)
471 3pgx_A Carveol dehydrogenase; 64.7 12 0.00042 30.5 5.9 89 116-212 20-116 (280)
472 3sx2_A Putative 3-ketoacyl-(ac 64.5 12 0.00041 30.4 5.9 88 116-212 18-113 (278)
473 1oju_A MDH, malate dehydrogena 63.4 2 6.8E-05 36.1 0.8 30 115-149 4-35 (294)
474 1coy_A Cholesterol oxidase; ox 63.3 3.6 0.00012 37.3 2.5 26 43-69 20-45 (507)
475 2qyt_A 2-dehydropantoate 2-red 62.7 2.8 9.4E-05 35.1 1.6 30 113-147 10-45 (317)
476 1dlj_A UDP-glucose dehydrogena 62.6 1.5 5.2E-05 38.6 -0.1 29 116-150 5-33 (402)
477 1t2d_A LDH-P, L-lactate dehydr 62.0 6.9 0.00024 33.2 3.9 32 114-150 7-39 (322)
478 2f1k_A Prephenate dehydrogenas 61.7 3.8 0.00013 33.6 2.2 29 116-149 5-33 (279)
479 1j6u_A UDP-N-acetylmuramate-al 61.6 4.2 0.00014 36.5 2.6 68 116-218 20-87 (469)
480 1x13_A NAD(P) transhydrogenase 61.1 6.1 0.00021 34.7 3.5 25 252-276 170-194 (401)
481 3ksu_A 3-oxoacyl-acyl carrier 60.7 14 0.00047 29.9 5.5 79 116-212 16-102 (262)
482 2rir_A Dipicolinate synthase, 60.6 5.7 0.00019 33.2 3.2 29 116-149 162-190 (300)
483 1yqg_A Pyrroline-5-carboxylate 60.6 3.2 0.00011 33.7 1.5 29 116-149 5-34 (263)
484 3tsc_A Putative oxidoreductase 60.5 16 0.00054 29.7 5.9 89 116-212 16-112 (277)
485 3vtf_A UDP-glucose 6-dehydroge 60.5 2.4 8.3E-05 37.8 0.8 39 115-158 25-63 (444)
486 1gpj_A Glutamyl-tRNA reductase 60.3 3.1 0.00011 36.5 1.5 70 109-211 167-237 (404)
487 3c24_A Putative oxidoreductase 59.9 3.7 0.00013 34.0 1.8 31 114-149 14-45 (286)
488 4gx0_A TRKA domain protein; me 59.8 3.6 0.00012 37.7 1.9 32 114-150 130-161 (565)
489 3gvi_A Malate dehydrogenase; N 59.7 8.2 0.00028 32.8 4.0 32 114-150 10-42 (324)
490 2vns_A Metalloreductase steap3 59.5 4 0.00014 32.3 1.9 32 113-149 30-61 (215)
491 1vg0_A RAB proteins geranylger 59.5 4.8 0.00016 37.8 2.7 26 48-74 22-47 (650)
492 3p2o_A Bifunctional protein fo 58.9 7.6 0.00026 32.4 3.5 65 92-211 148-213 (285)
493 4dio_A NAD(P) transhydrogenase 58.7 7.2 0.00025 34.3 3.5 24 253-276 189-212 (405)
494 2vhw_A Alanine dehydrogenase; 58.4 7.3 0.00025 33.8 3.5 24 252-275 166-189 (377)
495 3uve_A Carveol dehydrogenase ( 58.2 23 0.00079 28.8 6.6 91 116-212 16-115 (286)
496 3p2y_A Alanine dehydrogenase/p 58.2 5.9 0.0002 34.6 2.8 23 253-275 183-205 (381)
497 1l7d_A Nicotinamide nucleotide 57.4 7.7 0.00026 33.7 3.5 24 252-275 170-193 (384)
498 3t37_A Probable dehydrogenase; 57.1 5 0.00017 36.2 2.4 26 43-69 26-52 (526)
499 1i36_A Conserved hypothetical 56.8 3.9 0.00013 33.2 1.5 27 116-147 5-31 (264)
500 2rir_A Dipicolinate synthase, 56.8 8 0.00027 32.2 3.4 24 252-275 155-178 (300)
No 1
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.95 E-value=4.2e-28 Score=221.32 Aligned_cols=209 Identities=33% Similarity=0.515 Sum_probs=163.3
Q ss_pred Ccchh--HHHhhhhhhcc-ccccceeeccccchhcccccccccccccchhchHHHHHhhCCCeEEEeccCCCCCceeeec
Q psy12810 1 MIWDH--QLEKRLDNTLI-QECEPVLSGKVPRIDLEYTINNECRAFTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYG 77 (276)
Q Consensus 1 ~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~ 77 (276)
+|||| |||.+|.|... + +||.|+.|+||..|....+ |+. + .
T Consensus 71 rvCp~~~~Ce~~C~~~~~~~--~~v~I~~le~~~~~~~~~~-------------------~~~-----~-~--------- 114 (456)
T 2vdc_G 71 RICPQDRLCEGNCVIEQSTH--GAVTIGSVEKYINDTAWDQ-------------------GWV-----K-P--------- 114 (456)
T ss_dssp HHCCGGGSGGGGCGGGGSSS--CSCCHHHHHHHHHHHHHHH-------------------TCC-----C-C---------
T ss_pred ccCCCCcchHHhcccCCCCC--CCccHHHHHHHHHHHHHHc-------------------CCC-----C-C---------
Confidence 48999 99999999998 8 9999999999998764431 110 0 0
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCeEEeccccCccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee
Q psy12810 78 IPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY 157 (276)
Q Consensus 78 ~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~ 157 (276)
.. + ....++++.| ||+||+ |+++|..|++.|++|+|||+.+.+||.+++
T Consensus 115 ---~~-~--------------------~~~~~~~V~I--IGgGpA-----Gl~aA~~L~~~G~~V~v~e~~~~~GG~l~~ 163 (456)
T 2vdc_G 115 ---RT-P--------------------SRELGLSVGV--IGAGPA-----GLAAAEELRAKGYEVHVYDRYDRMGGLLVY 163 (456)
T ss_dssp ---CC-S--------------------CSSCCCCEEE--ECCSHH-----HHHHHHHHHHHTCCEEEECSSSSCSTHHHH
T ss_pred ---CC-C--------------------cCCCCCEEEE--ECCCHH-----HHHHHHHHHHCCCeEEEEeccCCCCCeeee
Confidence 00 0 0011244555 999999 999999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccccchhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHH
Q psy12810 158 GIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESW 237 (276)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~ 237 (276)
++|.+..++++..+..+.+++.|++|++++.+..++..+...+.||+||+|||++.|+.+++||.+.++++++.+|+...
T Consensus 164 gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~~v~~~~~~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~ 243 (456)
T 2vdc_G 164 GIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGRDASLPELRRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTS 243 (456)
T ss_dssp TSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTTTBCHHHHHSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHH
T ss_pred cCCCccCCHHHHHHHHHHHHHCCcEEEeCCEeccEEEhhHhHhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHh
Confidence 99988888888888889999999999999988655444445578999999999964778899998889999998988765
Q ss_pred HHhhcCCCCC-C---CCCCCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 238 QKKQMGNENV-S---PISAKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 238 ~~~~~~~~~~-~---~~~~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
.......... . .....+|+|+|||||++|+|+|..+.|+
T Consensus 244 ~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~ 286 (456)
T 2vdc_G 244 NKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQ 286 (456)
T ss_dssp HHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHT
T ss_pred hhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHc
Confidence 5432211000 0 0125789999999999999999988764
No 2
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.88 E-value=5.9e-23 Score=203.73 Aligned_cols=214 Identities=21% Similarity=0.292 Sum_probs=155.0
Q ss_pred cchh--HHHhhhhhhcc-ccccceeeccccchhcccccccccccccchhchHHHHHhhCCCeEEEeccCCCCCceeeecC
Q psy12810 2 IWDH--QLEKRLDNTLI-QECEPVLSGKVPRIDLEYTINNECRAFTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYGI 78 (276)
Q Consensus 2 ~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~~ 78 (276)
|||| |||.+|.+... + +||.|+.||||..|.......... +.+.++
T Consensus 129 vCp~~~~Ce~~C~~~~~~~--~pv~I~~le~~~~d~~~~~~~~~~----------------------~~p~~~------- 177 (1025)
T 1gte_A 129 VCPTSDLCVGGCNLYATEE--GSINIGGLQQFASEVFKAMNIPQI----------------------RNPCLP------- 177 (1025)
T ss_dssp HCCGGGSGGGGCGGGGSTT--CCCCHHHHHHHHHHHHHHHTCCCC----------------------CCTTSC-------
T ss_pred CCCChhhHHhhCccCCCCC--CCccHhHHHHHHHHHHHHhCCccc----------------------cCcccc-------
Confidence 7998 99999999875 5 899999999999987554222100 001000
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCeEEeccccCccchhhhccCCCCCCCCCCCCcchhhhhCCc-EEEEEcCCCccceeeee
Q psy12810 79 PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKVTNHTPQSDNQTKHCPPLIVNIVGH-SVTVFERNDRVGGLLQY 157 (276)
Q Consensus 79 ~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~-~Vtvie~~~~~gg~~~~ 157 (276)
. .. . .....++++.| ||+||+ |+++|..|++.|+ +|+|||+.+.+||.+.+
T Consensus 178 -~---~~-----------~------~~~~~~~~VvV--IGgGpA-----Gl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~ 229 (1025)
T 1gte_A 178 -S---QE-----------K------MPEAYSAKIAL--LGAGPA-----SISCASFLARLGYSDITIFEKQEYVGGLSTS 229 (1025)
T ss_dssp -C---GG-----------G------SCGGGGCCEEE--ECCSHH-----HHHHHHHHHHTTCCCEEEEESSSSCSTHHHH
T ss_pred -c---cc-----------c------CCccCCCEEEE--ECccHH-----HHHHHHHHHhcCCCcEEEEeCCCCCCccccc
Confidence 0 00 0 00011345555 999999 9999999999999 79999999999999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc-ccchhh-hhcccCEEEEcCCCCCCCCCCC-CCcC-CCCeeehHHH
Q psy12810 158 GIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK-DIAAKE-LYEEFDALLLCTGATWPRDLPI-PGRQ-LSGIYFAMSF 233 (276)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~-~~~~~~-~~~~~D~vVlAtG~~~p~~~~i-~g~~-~~gv~~~~~~ 233 (276)
++|.+..++++..+..+++++.||++++++.+.. +++.+. ..+.||+||+|||+..|+.+++ +|.+ ..+++++.+|
T Consensus 230 ~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~ 309 (1025)
T 1gte_A 230 EIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDF 309 (1025)
T ss_dssp TSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBSTTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHH
T ss_pred cCCcccCCHHHHHHHHHHHHHCCcEEEcccEeccceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHH
Confidence 9998888888888888889999999999998753 222222 3578999999999832776654 4554 4689999998
Q ss_pred HHHHHHhhcC----CCCCCCCCCCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 234 LESWQKKQMG----NENVSPISAKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 234 l~~~~~~~~~----~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
++..+..... .+... ...+++|+|||||++|+|+|..+.++
T Consensus 310 L~~~~~~~~~~~~~~~~~~--~~~~~~VvVIGgG~~g~e~A~~~~~~ 354 (1025)
T 1gte_A 310 LPLVAKSSKAGMCACHSPL--PSIRGAVIVLGAGDTAFDCATSALRC 354 (1025)
T ss_dssp HHHHHHHHCBTTBSCCCCC--CCCCSEEEEECSSHHHHHHHHHHHHT
T ss_pred HHHHHhhcccccccccccc--cccCCcEEEECCChHHHHHHHHHHHc
Confidence 8765543210 00000 13467999999999999999998764
No 3
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.77 E-value=5.6e-19 Score=161.28 Aligned_cols=154 Identities=21% Similarity=0.353 Sum_probs=119.8
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCC--cEEEEEcCCCccceeeeecC-CCCCCcHHHHHHHHHHHHhcCcEEEeeeeec
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVG--HSVTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVG 190 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G--~~Vtvie~~~~~gg~~~~~~-~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~ 190 (276)
+.|||+||+ |+.+|..|++.| .+|+|||+.+.++|.|+++. |.++..+++...+.+.+++.|++++.++.+.
T Consensus 9 vvIIG~G~a-----Gl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 83 (460)
T 1cjc_A 9 ICVVGSGPA-----GFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG 83 (460)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT
T ss_pred EEEECcCHH-----HHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe
Confidence 344999999 999999999988 99999999999998998876 4444556677777788888999999998876
Q ss_pred cccchhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHH
Q psy12810 191 KDIAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCI 270 (276)
Q Consensus 191 ~~~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A 270 (276)
.++..+...+.||+||+|||+..++.+++||.+.++++++.+++..++...... .+.....+++|+|||+|++|+|+|
T Consensus 84 ~~V~~~~~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~--~~~~~~~~~~vvVIGgG~~g~e~A 161 (460)
T 1cjc_A 84 RDVTVQELQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENR--ELAPDLSCDTAVILGQGNVALDVA 161 (460)
T ss_dssp TTBCHHHHHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGT--TCCCCTTSSEEEEESCSHHHHHHH
T ss_pred eEEEeccceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCcccc--ccccCCCCCEEEEECCCHHHHHHH
Confidence 444444455789999999999833778999998889999888766543211000 011013689999999999999999
Q ss_pred HHhh
Q psy12810 271 ATSL 274 (276)
Q Consensus 271 ~~~~ 274 (276)
..+.
T Consensus 162 ~~L~ 165 (460)
T 1cjc_A 162 RILL 165 (460)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9886
No 4
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.76 E-value=8.4e-19 Score=159.95 Aligned_cols=155 Identities=25% Similarity=0.354 Sum_probs=119.0
Q ss_pred hhhccCCCCCCCCCCCCcchhhhh-C------CcEEEEEcCCCccceeeeecC-CCCCCcHHHHHHHHHHHHhcCcEEEe
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNI-V------GHSVTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKT 185 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~-~------G~~Vtvie~~~~~gg~~~~~~-~~~~~~~~~~~~~~~~l~~~gv~i~~ 185 (276)
+.|||+||+ |+.+|..|++ . |.+|+|||+.+.++|.++++. |.+...+++...+.+.+.+.+++++.
T Consensus 6 VvIIG~G~a-----Gl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~ 80 (456)
T 1lqt_A 6 IAIVGSGPS-----AFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFG 80 (456)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEE
T ss_pred EEEECcCHH-----HHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEe
Confidence 345999999 9999999999 7 999999999999999998886 44455566777777888888999999
Q ss_pred eeeeccccchhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChH
Q psy12810 186 NINVGKDIAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDT 265 (276)
Q Consensus 186 ~~~v~~~~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~ 265 (276)
++.+..++..+...+.||+||+|||+..|+.+++||.+.++++++.++...++....... ... ...+++|+|||+|++
T Consensus 81 ~v~v~~~v~~~~~~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~-~~~-~~~~~~vvVIG~G~~ 158 (456)
T 1lqt_A 81 NVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQ-VSP-DLSGARAVVIGNGNV 158 (456)
T ss_dssp SCCBTTTBCHHHHHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTT-CCC-CCCSSEEEEECCSHH
T ss_pred eEEECCEEEECCCeEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCccccc-chh-hcCCCEEEEECCCHH
Confidence 976643333333467899999999996367789999888899998887654432111000 011 136899999999999
Q ss_pred HHHHHHHhhc
Q psy12810 266 GCDCIATSLR 275 (276)
Q Consensus 266 G~E~A~~~~r 275 (276)
|+|+|..+.+
T Consensus 159 g~e~A~~L~~ 168 (456)
T 1lqt_A 159 ALDVARILLT 168 (456)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 5
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.70 E-value=1.7e-17 Score=143.64 Aligned_cols=144 Identities=17% Similarity=0.238 Sum_probs=102.5
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee-ee----cCCCCC--CcHHHHHHHHHHHHhcCcEEE
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL-QY----GIPTMK--LSKEVVQRRVKLLAAEGIEFK 184 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~-~~----~~~~~~--~~~~~~~~~~~~l~~~gv~i~ 184 (276)
+.+.|||+||+ |+++|..|++.|++|+|||+.. +||.+ +. ++|.+. ...++.........+.+..+.
T Consensus 7 yDvvIIG~GpA-----Gl~aA~~l~~~g~~V~liE~~~-~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
T 4gcm_A 7 FDIAIIGAGPA-----GMTAAVYASRANLKTVMIERGI-PGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQ 80 (312)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECCCHH-----HHHHHHHHHHCCCCEEEEecCC-CCCeeecccccCCcCCccccchHHHHHHHHHHHhhcccccc
Confidence 44556999999 9999999999999999999865 55533 22 233322 235666667777777787777
Q ss_pred eeeeecc-------ccchhhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCCCCCCC
Q psy12810 185 TNINVGK-------DIAAKELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSPISAKD 254 (276)
Q Consensus 185 ~~~~v~~-------~~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~ 254 (276)
.+..+.. .......++.||+||+|||++ |+.|++||.+. .++.+. ...+.. ...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~-~~~~~ipG~~~~~~~~v~~~-~~~~~~-------------~~~~ 145 (312)
T 4gcm_A 81 YGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAE-YKKIGVPGEQELGGRGVSYC-AVCDGA-------------FFKN 145 (312)
T ss_dssp ECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEE-ECCCCCTTTTTTBTTTEESC-HHHHGG-------------GGTT
T ss_pred ceeeeeeeeeecceeeccCCeEEEeceeEEcccCc-cCcCCCCChhhhCCccEEee-eccCcc-------------ccCC
Confidence 7654431 122334568899999999998 99999999764 344432 222221 2568
Q ss_pred CeEEEEcCChHHHHHHHHhhcC
Q psy12810 255 KNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 255 k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
|+++|||||++|+|+|..+.++
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~ 167 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKF 167 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhc
Confidence 9999999999999999988764
No 6
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.68 E-value=1.9e-17 Score=143.15 Aligned_cols=145 Identities=16% Similarity=0.183 Sum_probs=101.9
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc----ceeee-----ecCCC---CCCcHHHHHHHHHHHHhcCc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV----GGLLQ-----YGIPT---MKLSKEVVQRRVKLLAAEGI 181 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~----gg~~~-----~~~~~---~~~~~~~~~~~~~~l~~~gv 181 (276)
+.|||+||+ |+++|..|++.|++|+|||+.... +|.++ ++.|. ....+++...+.+.+.+.++
T Consensus 7 vvIIG~GpA-----Gl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~ 81 (314)
T 4a5l_A 7 VVIIGSGPA-----AHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGT 81 (314)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCc
Confidence 445999999 999999999999999999987642 22222 11222 22336777788888888899
Q ss_pred EEEeeeeecc--------ccchhhhhcccCEEEEcCCCCCCCCCCCCCcCCC---CeeehHHHHHHHHHhhcCCCCCCCC
Q psy12810 182 EFKTNINVGK--------DIAAKELYEEFDALLLCTGATWPRDLPIPGRQLS---GIYFAMSFLESWQKKQMGNENVSPI 250 (276)
Q Consensus 182 ~i~~~~~v~~--------~~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~---gv~~~~~~l~~~~~~~~~~~~~~~~ 250 (276)
++...+.... ....+..++.||+||+|||++ |+.|++||.+.. .+.. ..+.+... .
T Consensus 82 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~-~~~~~ipG~~~~~~~~~~~-~~~~~~~~-----------~ 148 (314)
T 4a5l_A 82 TIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGAT-AKRMHVPGEDKYWQNGVSA-CAICDGAV-----------P 148 (314)
T ss_dssp EEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEE-ECCCCCTTHHHHBTTTEES-CHHHHTTS-----------G
T ss_pred EEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEccccc-ccccCCCccccccccceee-ehhhhhhh-----------h
Confidence 8877654321 112344568899999999998 999999997642 2222 12222111 1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 251 SAKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 251 ~~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
...+++++|||||++|+|+|..+.++
T Consensus 149 ~~~~~~vvViGgG~ig~e~A~~l~~~ 174 (314)
T 4a5l_A 149 IFRNKVLMVVGGGDAAMEEALHLTKY 174 (314)
T ss_dssp GGTTSEEEEECSSHHHHHHHHHHTTT
T ss_pred hcCCCeEEEECCChHHHHHHHHHHHh
Confidence 25789999999999999999998764
No 7
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.66 E-value=5.1e-17 Score=148.56 Aligned_cols=142 Identities=21% Similarity=0.323 Sum_probs=104.2
Q ss_pred hhccCCCCCCCCCCCCcchhhhh---CCcE---EEEEcCCCccceeeeecC-----------------------------
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNI---VGHS---VTVFERNDRVGGLLQYGI----------------------------- 159 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~---~G~~---Vtvie~~~~~gg~~~~~~----------------------------- 159 (276)
.|||+||+ |+.+|..|++ .|.+ |+|||+.+.+||.|.+..
T Consensus 6 ~IIGaG~a-----Gl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~ 80 (464)
T 2xve_A 6 AILGAGPS-----GMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLE 80 (464)
T ss_dssp EEECCSHH-----HHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTC
T ss_pred EEECccHH-----HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcc
Confidence 34999999 9999999999 9999 999999999999887521
Q ss_pred --------------CCCCCcHHHHHHHHHHHHhcCcE--EEeeeeecc----------ccc------hhhhhcccCEEEE
Q psy12810 160 --------------PTMKLSKEVVQRRVKLLAAEGIE--FKTNINVGK----------DIA------AKELYEEFDALLL 207 (276)
Q Consensus 160 --------------~~~~~~~~~~~~~~~~l~~~gv~--i~~~~~v~~----------~~~------~~~~~~~~D~vVl 207 (276)
+.+....++.+++.+.+++.|++ +++++.|.. .+. ++..++.||.||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVv 160 (464)
T 2xve_A 81 FADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVC 160 (464)
T ss_dssp BTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEE
T ss_pred cCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEE
Confidence 01112245666677777778887 888876541 111 1114578999999
Q ss_pred cCC--CCCCCCCCCCCcCC-CC-eeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 208 CTG--ATWPRDLPIPGRQL-SG-IYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 208 AtG--~~~p~~~~i~g~~~-~g-v~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
||| +. |+.|++||.+. ++ ++++.++.+. ..+.+|+|+|||+|++|+|+|.++.+
T Consensus 161 AtG~~s~-p~~p~ipG~~~~~g~~~hs~~~~~~-------------~~~~~k~VvVVG~G~sg~eiA~~l~~ 218 (464)
T 2xve_A 161 CTGHFST-PYVPEFEGFEKFGGRILHAHDFRDA-------------LEFKDKTVLLVGSSYSAEDIGSQCYK 218 (464)
T ss_dssp CCCSSSS-BCCCCCBTTTTCCSEEEEGGGCCCG-------------GGGTTSEEEEECCSTTHHHHHHHHHH
T ss_pred CCCCCCC-CccCCCCCcccCCceEEehhhhCCH-------------hHcCCCEEEEEcCCCCHHHHHHHHHH
Confidence 999 55 99999999764 44 5565443221 02578999999999999999998865
No 8
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.66 E-value=5.8e-17 Score=154.55 Aligned_cols=137 Identities=24% Similarity=0.381 Sum_probs=108.3
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec--CCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG--IPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK 191 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~--~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 191 (276)
+.|||+||+ |+++|..|++.|++|+|||+.+.+||.+.+. +|......++...+.+.+++.|+++++++.+..
T Consensus 376 vvIIGgG~A-----Gl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 450 (671)
T 1ps9_A 376 LAVVGAGPA-----GLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA 450 (671)
T ss_dssp EEEECCSHH-----HHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH
Confidence 445999999 9999999999999999999999988876542 333223345556667778888999999987753
Q ss_pred ccchhhhhc-ccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHH
Q psy12810 192 DIAAKELYE-EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCI 270 (276)
Q Consensus 192 ~~~~~~~~~-~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A 270 (276)
. .+ .||+||+|||+. |+.|++||.+..++++..++++. ....+++|+|||||++|+|+|
T Consensus 451 ~------~~~~~d~lviAtG~~-p~~~~i~G~~~~~v~~~~~~l~~-------------~~~~~~~VvVIGgG~~g~E~A 510 (671)
T 1ps9_A 451 D------QLQAFDETILASGIV-PRTPPIDGIDHPKVLSYLDVLRD-------------KAPVGNKVAIIGCGGIGFDTA 510 (671)
T ss_dssp S------SSCCSSEEEECCCEE-ECCCCCBTTTSTTEEEHHHHHTS-------------CCCCCSEEEEECCHHHHHHHH
T ss_pred H------HhhcCCEEEEccCCC-cCCCCCCCCCCCcEeeHHHHhhC-------------CCCCCCeEEEECCChhHHHHH
Confidence 1 24 899999999998 99999999887778876544321 025689999999999999999
Q ss_pred HHhhc
Q psy12810 271 ATSLR 275 (276)
Q Consensus 271 ~~~~r 275 (276)
..+.+
T Consensus 511 ~~l~~ 515 (671)
T 1ps9_A 511 MYLSQ 515 (671)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 98865
No 9
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.63 E-value=1.2e-16 Score=139.95 Aligned_cols=144 Identities=16% Similarity=0.152 Sum_probs=104.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCC--------------CCC---------CcHHHHH
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIP--------------TMK---------LSKEVVQ 170 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~--------------~~~---------~~~~~~~ 170 (276)
+.|||+|++ |+.+|..|++.|++|+|||+.+.+||.|.+..+ .+. ...++..
T Consensus 6 vvIIG~G~a-----Gl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T 4a9w_A 6 VVVIGGGQS-----GLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLA 80 (357)
T ss_dssp EEEECCSHH-----HHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHH
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHH
Confidence 445999999 999999999999999999999998887754211 111 1156777
Q ss_pred HHHHHHHhcCcEEEeeeeecc-c--------cchhhhhcccCEEEEcCCCC-CCCCCCCCCcCC-CC-eeehHHHHHHHH
Q psy12810 171 RRVKLLAAEGIEFKTNINVGK-D--------IAAKELYEEFDALLLCTGAT-WPRDLPIPGRQL-SG-IYFAMSFLESWQ 238 (276)
Q Consensus 171 ~~~~~l~~~gv~i~~~~~v~~-~--------~~~~~~~~~~D~vVlAtG~~-~p~~~~i~g~~~-~g-v~~~~~~l~~~~ 238 (276)
++.+.+++.|+++++++.|+. + +..+..++.||.||+|+|.+ .|+.|++||.+. .+ .++..++.+.
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-- 158 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGRQWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTP-- 158 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSCEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCS--
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCCEEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCCh--
Confidence 777888888999999877641 1 22222368899999999964 377788888653 22 3333222211
Q ss_pred HhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 239 KKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 239 ~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
....+++|+|||+|++|+|+|..+.+
T Consensus 159 -----------~~~~~~~v~VvG~G~~g~e~a~~l~~ 184 (357)
T 4a9w_A 159 -----------APFAGMRVAIIGGGNSGAQILAEVST 184 (357)
T ss_dssp -----------GGGTTSEEEEECCSHHHHHHHHHHTT
T ss_pred -----------hhcCCCEEEEECCCcCHHHHHHHHHh
Confidence 12578999999999999999998865
No 10
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.61 E-value=4.6e-17 Score=145.38 Aligned_cols=145 Identities=12% Similarity=0.189 Sum_probs=100.3
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCC----CCCcHHHHHHHHHHHHhcCcEEEeeeee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPT----MKLSKEVVQRRVKLLAAEGIEFKTNINV 189 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~----~~~~~~~~~~~~~~l~~~gv~i~~~~~v 189 (276)
+.|||+|++ |+.+|..|...+.+|+|||+++.++ +.+..++. .....++.....+++++.+++++++++|
T Consensus 12 ~vIvGgG~A-----Gl~aA~~L~~~~~~itlie~~~~~~-y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V 85 (385)
T 3klj_A 12 ILILGAGPA-----GFSAAKAALGKCDDITMINSEKYLP-YYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFA 85 (385)
T ss_dssp EEEECCSHH-----HHHHHHHHTTTCSCEEEECSSSSCC-BCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCE
T ss_pred EEEEcCcHH-----HHHHHHHHhCCCCEEEEEECCCCCC-cccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEE
Confidence 334999999 9999999988899999999998765 32221111 1111222233456677889999999876
Q ss_pred cc-cc------chhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcC
Q psy12810 190 GK-DI------AAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGG 262 (276)
Q Consensus 190 ~~-~~------~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGg 262 (276)
+. +. ..+..++.||+||+|||++ |+.|++||.+ ++++..++.+....... ...+++++||||
T Consensus 86 ~~id~~~~~v~~~~g~~~~yd~lvlAtG~~-p~~p~i~G~~--~v~~~~~~~d~~~l~~~--------l~~~~~vvVIGg 154 (385)
T 3klj_A 86 TSIDPNNKLVTLKSGEKIKYEKLIIASGSI-ANKIKVPHAD--EIFSLYSYDDALKIKDE--------CKNKGKAFIIGG 154 (385)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEE-ECCCCCTTCS--CEECCSSHHHHHHHHHH--------HHHHSCEEEECC
T ss_pred EEEECCCCEEEECCCCEEECCEEEEecCCC-cCCCCCCCCC--CeEEeCCHHHHHHHHHH--------hhcCCeEEEECC
Confidence 51 11 1122368899999999998 9999999987 77664443222211100 134789999999
Q ss_pred ChHHHHHHHHhhc
Q psy12810 263 GDTGCDCIATSLR 275 (276)
Q Consensus 263 G~~G~E~A~~~~r 275 (276)
|++|+|+|..+.+
T Consensus 155 G~~g~E~A~~l~~ 167 (385)
T 3klj_A 155 GILGIELAQAIID 167 (385)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 9999999998764
No 11
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.61 E-value=3.1e-16 Score=142.62 Aligned_cols=144 Identities=19% Similarity=0.230 Sum_probs=102.1
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCc--EEEEEcCCCccceeeeecC--------C-----------------------
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGH--SVTVFERNDRVGGLLQYGI--------P----------------------- 160 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~--~Vtvie~~~~~gg~~~~~~--------~----------------------- 160 (276)
+.|||+||+ |+++|..|++.|. +|+|||+.+.+||.|.+.. |
T Consensus 9 V~IIGaG~a-----Gl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 9 IAIIGAGPS-----GLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp EEEECCSHH-----HHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred EEEECccHH-----HHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 344999999 9999999999999 9999999998888886531 0
Q ss_pred --------------------------CCCCcHHHHHHHHHHHHhcCcEEEeeeeecc--------cc--c----hh-hhh
Q psy12810 161 --------------------------TMKLSKEVVQRRVKLLAAEGIEFKTNINVGK--------DI--A----AK-ELY 199 (276)
Q Consensus 161 --------------------------~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~--------~~--~----~~-~~~ 199 (276)
.++...++.+++.+.+.+.+..+++++.|+. .+ . ++ ..+
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~ 163 (447)
T 2gv8_A 84 LYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISK 163 (447)
T ss_dssp CCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEE
T ss_pred hhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEE
Confidence 0001124555566666666777888877641 11 1 11 125
Q ss_pred cccCEEEEcCCCC-CCCCCCCCCcCC-----CC-eeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHH
Q psy12810 200 EEFDALLLCTGAT-WPRDLPIPGRQL-----SG-IYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIAT 272 (276)
Q Consensus 200 ~~~D~vVlAtG~~-~p~~~~i~g~~~-----~g-v~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~ 272 (276)
+.||.||+|+|+. .|+.|++||.+. ++ ++++.++.+. ..+.+|+|+|||+|++|+|+|..
T Consensus 164 ~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~-------------~~~~~k~VvVvG~G~sg~e~A~~ 230 (447)
T 2gv8_A 164 DIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREP-------------ELFVGESVLVVGGASSANDLVRH 230 (447)
T ss_dssp EEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCG-------------GGGTTCCEEEECSSHHHHHHHHH
T ss_pred EEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCCh-------------hhcCCCEEEEEccCcCHHHHHHH
Confidence 7899999999984 388888988652 33 5555443221 02578999999999999999998
Q ss_pred hhc
Q psy12810 273 SLR 275 (276)
Q Consensus 273 ~~r 275 (276)
+.+
T Consensus 231 l~~ 233 (447)
T 2gv8_A 231 LTP 233 (447)
T ss_dssp HTT
T ss_pred HHH
Confidence 865
No 12
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.60 E-value=2.9e-16 Score=142.85 Aligned_cols=146 Identities=24% Similarity=0.325 Sum_probs=95.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCCccceeeeecCCCCC----CcHHHHHHHHHHH-HhcCcEEEee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERNDRVGGLLQYGIPTMK----LSKEVVQRRVKLL-AAEGIEFKTN 186 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~~~gg~~~~~~~~~~----~~~~~~~~~~~~l-~~~gv~i~~~ 186 (276)
+.|||+|++ |+++|..|++. |.+|+|||+.+.++ ..++++|.+. ...++.....+.+ ++.+++++++
T Consensus 6 VvIIGgG~a-----Gl~aA~~L~~~~~~~~V~vie~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~ 79 (449)
T 3kd9_A 6 VVIIGGGAA-----GMSAASRVKRLKPEWDVKVFEATEWVS-HAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLN 79 (449)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHCTTSEEEEECSSSCCC-------------------------CTHHHHTTCEEETT
T ss_pred EEEECCcHH-----HHHHHHHHHHhCcCCCEEEEECCCccc-cCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEec
Confidence 334999999 99999999987 88999999999765 3333444321 1223333333444 5789999999
Q ss_pred eeec-cc-----c--chhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHH---HHHHHHHhhcCCCCCCCCCCCCC
Q psy12810 187 INVG-KD-----I--AAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMS---FLESWQKKQMGNENVSPISAKDK 255 (276)
Q Consensus 187 ~~v~-~~-----~--~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~---~l~~~~~~~~~~~~~~~~~~~~k 255 (276)
+.+. .+ + .+....+.||.||+|||++ |+.|++||.+.+++++..+ .+...+... .+.++
T Consensus 80 ~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~-p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~---------~~~~~ 149 (449)
T 3kd9_A 80 AEVIEVDTGYVRVRENGGEKSYEWDYLVFANGAS-PQVPAIEGVNLKGVFTADLPPDALAIREYME---------KYKVE 149 (449)
T ss_dssp CEEEEECSSEEEEECSSSEEEEECSEEEECCCEE-ECCCSCBTTTSTTEECSCSTHHHHHHHHHHS---------SSCCC
T ss_pred CEEEEEecCCCEEEECCceEEEEcCEEEECCCCC-CCCCCCCCCCCCCEEEeCCHHHHHHHHHHHH---------hcCCC
Confidence 7664 11 1 1112368899999999998 9999999988778775433 222222110 13789
Q ss_pred eEEEEcCChHHHHHHHHhhc
Q psy12810 256 NVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 256 ~vvVIGgG~~G~E~A~~~~r 275 (276)
+++|||+|++|+|+|..+.+
T Consensus 150 ~vvViGgG~~g~E~A~~l~~ 169 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAA 169 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHh
Confidence 99999999999999998765
No 13
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.59 E-value=2.5e-16 Score=143.43 Aligned_cols=147 Identities=18% Similarity=0.226 Sum_probs=100.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCCccceeeeecCCCCC-----CcHHHHHHHHHHHHhcCcEEEee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERNDRVGGLLQYGIPTMK-----LSKEVVQRRVKLLAAEGIEFKTN 186 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~~~gg~~~~~~~~~~-----~~~~~~~~~~~~l~~~gv~i~~~ 186 (276)
+.|||+|++ |+.+|..|++. |.+|+|||+++.+| +.+.+++.+. ...++.....+.+.+.+++++++
T Consensus 5 VvIIGgG~A-----Gl~aA~~L~~~~~g~~V~vie~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ 78 (452)
T 3oc4_A 5 IVIIGASFA-----GISAAIASRKKYPQAEISLIDKQATVG-YLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLN 78 (452)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHCSSSEEEEECSSSCCS-SCCC----------------CCCCHHHHHHTTEEEECS
T ss_pred EEEECCCHH-----HHHHHHHHHhhCcCCcEEEEECCCCCc-ccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEEC
Confidence 334999999 99999999998 89999999999876 3322222111 11122222345677889999988
Q ss_pred eeecc-cc---------chhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCe
Q psy12810 187 INVGK-DI---------AAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKN 256 (276)
Q Consensus 187 ~~v~~-~~---------~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~ 256 (276)
+.++. +. .++...+.||.+|+|||++ |..|++||.+.+++++..++.+...... ....+++
T Consensus 79 ~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~-p~~p~i~g~~~~~v~~~~~~~~~~~~~~--------~~~~~~~ 149 (452)
T 3oc4_A 79 REVVAMDVENQLIAWTRKEEQQWYSYDKLILATGAS-QFSTQIRGSQTEKLLKYKFLSGALAAVP--------LLENSQT 149 (452)
T ss_dssp CEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCC-BCCCCCBTTTCTTEEEGGGCC----CCH--------HHHTCSE
T ss_pred CEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcc-cCCCCCCCCCCCCEEEeCCHHHHHHHHH--------HHhcCCE
Confidence 77641 11 1233467899999999998 9999999998888887655433221110 0146799
Q ss_pred EEEEcCChHHHHHHHHhhc
Q psy12810 257 VIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 257 vvVIGgG~~G~E~A~~~~r 275 (276)
++|||+|++|+|+|..+.+
T Consensus 150 vvViGgG~~g~E~A~~l~~ 168 (452)
T 3oc4_A 150 VAVIGAGPIGMEAIDFLVK 168 (452)
T ss_dssp EEEECCSHHHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHh
Confidence 9999999999999998765
No 14
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.58 E-value=9.7e-16 Score=142.14 Aligned_cols=164 Identities=16% Similarity=0.164 Sum_probs=112.2
Q ss_pred ccchhchHHHHHhhCCCeEEEeccC--------CCCCceee-ecC-C----------------------------CCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERN--------DRVGGLLQ-YGI-P----------------------------TMKLS 84 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~--------~~lGG~~~-~~~-~----------------------------~~~~~ 84 (276)
+|||+.||+. |++.|.+|+|+|+. ..+||+|. +|| | .+++.
T Consensus 51 GpaG~~aA~~-aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~~~~~~d~~ 129 (542)
T 4b1b_A 51 GPGGMASAKE-AAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKFDNLKHDWK 129 (542)
T ss_dssp SHHHHHHHHH-HHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEEEEEEECHH
T ss_pred CHHHHHHHHH-HHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcccCcccccHH
Confidence 6999999999 99999999999963 35999982 332 1 11111
Q ss_pred HHHH-----------HHHHHHHHhCCCeEEecccc---------------Cc------cchhhhccCCCCCC--------
Q psy12810 85 KEVV-----------QRRVKLLAAEGIEFKTNINV---------------GK------DIAAKVTNHTPQSD-------- 124 (276)
Q Consensus 85 ~~~~-----------~~~~~~l~~~gv~~~~~~~v---------------~~------~v~v~iiG~gp~~~-------- 124 (276)
.+. ......+++.||++..+... +. +..+..+|+.|..|
T Consensus 130 -~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~P~~~~~~~~ 208 (542)
T 4b1b_A 130 -KLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPDDVEGAKE 208 (542)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECCCSSSBTHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCCCCcccCCCc
Confidence 111 11224567789987655310 00 11111345544432
Q ss_pred -----------------------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCc
Q psy12810 125 -----------------------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGI 181 (276)
Q Consensus 125 -----------------------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv 181 (276)
|++|+|+|..|+++|.+|||+++...+ + ..++++...+.+.+++.|+
T Consensus 209 ~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L--------~--~~D~ei~~~l~~~l~~~gi 278 (542)
T 4b1b_A 209 LSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL--------R--GFDQQCAVKVKLYMEEQGV 278 (542)
T ss_dssp HCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS--------T--TSCHHHHHHHHHHHHHTTC
T ss_pred cccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc--------c--ccchhHHHHHHHHHHhhcc
Confidence 778999999999999999999875432 1 4678888899999999999
Q ss_pred EEEeeeeeccc--------c-chhhhhcccCEEEEcCCCCCCCCCCC
Q psy12810 182 EFKTNINVGKD--------I-AAKELYEEFDALLLCTGATWPRDLPI 219 (276)
Q Consensus 182 ~i~~~~~v~~~--------~-~~~~~~~~~D~vVlAtG~~~p~~~~i 219 (276)
++++++.+... + ..+...+.+|.|++|+|++ ||...+
T Consensus 279 ~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~-Pnt~~L 324 (542)
T 4b1b_A 279 MFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRK-GDIDGL 324 (542)
T ss_dssp EEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE-ESCGGG
T ss_pred eeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccccc-CCcccc
Confidence 99999876421 1 1223356799999999998 887543
No 15
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.58 E-value=7.5e-16 Score=134.16 Aligned_cols=145 Identities=21% Similarity=0.308 Sum_probs=105.3
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCC----Cccceeeeec--------CCCCCCcHHHHHHHHHHHHhcC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERN----DRVGGLLQYG--------IPTMKLSKEVVQRRVKLLAAEG 180 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~----~~~gg~~~~~--------~~~~~~~~~~~~~~~~~l~~~g 180 (276)
.+.|||+|++ |+.+|..|++.|++|+|||+. ..+||.|.+. ++......++...+.+.+.+.|
T Consensus 24 ~vvIIG~G~a-----Gl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 98 (338)
T 3itj_A 24 KVTIIGSGPA-----AHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFG 98 (338)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcC
Confidence 3445999999 999999999999999999994 4778877642 2222234678888888889999
Q ss_pred cEEEeeeeeccccc-----------hhhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCC
Q psy12810 181 IEFKTNINVGKDIA-----------AKELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNEN 246 (276)
Q Consensus 181 v~i~~~~~v~~~~~-----------~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~ 246 (276)
+++++++....+.. .+...+.||.||+|+|++ |+.+++||.+. .++.+.. ..+...
T Consensus 99 v~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~-~~~~~~~g~~~~~~~~~~~~~-~~~~~~-------- 168 (338)
T 3itj_A 99 TEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGAS-AKRMHLPGEETYWQKGISACA-VCDGAV-------- 168 (338)
T ss_dssp CEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEE-ECCCCCTTHHHHBTTTEESCH-HHHTTS--------
T ss_pred CEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCC-cCCCCCCCchhccCccEEEch-hcccch--------
Confidence 99999883222111 133467899999999998 88889988652 3444322 122110
Q ss_pred CCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 247 VSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 247 ~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
....+++++|||+|++|+|+|..+.+
T Consensus 169 ---~~~~~~~v~vvG~G~~g~e~a~~l~~ 194 (338)
T 3itj_A 169 ---PIFRNKPLAVIGGGDSACEEAQFLTK 194 (338)
T ss_dssp ---GGGTTSEEEEECSSHHHHHHHHHHTT
T ss_pred ---hhcCCCEEEEECCCHHHHHHHHHHHh
Confidence 02578999999999999999998865
No 16
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.58 E-value=1.2e-16 Score=141.85 Aligned_cols=147 Identities=18% Similarity=0.211 Sum_probs=96.2
Q ss_pred CccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec----CCCCCCcHHHHHHHHHHHHhcCcEEE
Q psy12810 109 GKDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG----IPTMKLSKEVVQRRVKLLAAEGIEFK 184 (276)
Q Consensus 109 ~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~----~~~~~~~~~~~~~~~~~l~~~gv~i~ 184 (276)
+.++.| ||+||+ |+.+|..|++.| +|+|||+++... +.+.. +......+++.....+++++.|++++
T Consensus 8 ~~~vvI--IGgG~A-----Gl~aA~~l~~~g-~V~lie~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~ 78 (367)
T 1xhc_A 8 GSKVVI--VGNGPG-----GFELAKQLSQTY-EVTVIDKEPVPY-YSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIR 78 (367)
T ss_dssp -CEEEE--ECCSHH-----HHHHHHHHTTTS-EEEEECSSSSCC-CCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEE
T ss_pred CCcEEE--ECCcHH-----HHHHHHHHhhcC-CEEEEECCCCCc-cccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEE
Confidence 455555 999999 999999999999 999999988642 11100 00011111222223455677899999
Q ss_pred eeeeec-cc-----cchhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEE
Q psy12810 185 TNINVG-KD-----IAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVI 258 (276)
Q Consensus 185 ~~~~v~-~~-----~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vv 258 (276)
+++.+. .+ +..+..++.||+||+|||++ |+.|++|| .+++++..++.+..+.... ...+++++
T Consensus 79 ~g~~v~~id~~~~~V~~~g~~~~~d~lViATGs~-p~~p~i~G--~~~v~~~~~~~~~~~l~~~--------~~~~~~vv 147 (367)
T 1xhc_A 79 LAEEAKLIDRGRKVVITEKGEVPYDTLVLATGAR-AREPQIKG--KEYLLTLRTIFDADRIKES--------IENSGEAI 147 (367)
T ss_dssp CSCCEEEEETTTTEEEESSCEEECSEEEECCCEE-ECCCCSBT--GGGEECCCSHHHHHHHHHH--------HHHHSEEE
T ss_pred ECCEEEEEECCCCEEEECCcEEECCEEEECCCCC-CCCCCCCC--cCCEEEEcCHHHHHHHHHH--------hhcCCcEE
Confidence 987653 11 11122458899999999998 99999988 3456654332222111100 12468999
Q ss_pred EEcCChHHHHHHHHhhc
Q psy12810 259 VIGGGDTGCDCIATSLR 275 (276)
Q Consensus 259 VIGgG~~G~E~A~~~~r 275 (276)
|||||++|+|+|..+.+
T Consensus 148 ViGgG~~g~E~A~~l~~ 164 (367)
T 1xhc_A 148 IIGGGFIGLELAGNLAE 164 (367)
T ss_dssp EEECSHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHh
Confidence 99999999999998865
No 17
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.57 E-value=9.8e-16 Score=146.50 Aligned_cols=141 Identities=16% Similarity=0.138 Sum_probs=110.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee--cCCCCCCcHHHHHHHHHHHHhc-CcEEEeeeeec
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY--GIPTMKLSKEVVQRRVKLLAAE-GIEFKTNINVG 190 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~--~~~~~~~~~~~~~~~~~~l~~~-gv~i~~~~~v~ 190 (276)
+.|||+||+ |+++|..|++.|++|+|||+.+.+||.+.+ ..|......++..++.+.+.+. ++++++++.++
T Consensus 394 VvIIGgG~A-----Gl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 468 (690)
T 3k30_A 394 VLVVGAGPS-----GLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMT 468 (690)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCC
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeec
Confidence 445999999 999999999999999999999999887664 3444444556777777888887 99999998765
Q ss_pred cccchhhhhcccCEEEEcCCCC-C------CCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEc--
Q psy12810 191 KDIAAKELYEEFDALLLCTGAT-W------PRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIG-- 261 (276)
Q Consensus 191 ~~~~~~~~~~~~D~vVlAtG~~-~------p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIG-- 261 (276)
. .....+.||.||+|||+. . |..+++||.+..++++..++++. ....+++|+|||
T Consensus 469 ~---~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~-------------~~~~g~~VvViG~g 532 (690)
T 3k30_A 469 G---DDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAG-------------RLPDGKKVVVYDDD 532 (690)
T ss_dssp H---HHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTT-------------CCCSSSEEEEEECS
T ss_pred H---HHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCC-------------CCCCCCEEEEEcCC
Confidence 3 233467899999999997 1 34678888887777776554432 025788999999
Q ss_pred CChHHHHHHHHhhc
Q psy12810 262 GGDTGCDCIATSLR 275 (276)
Q Consensus 262 gG~~G~E~A~~~~r 275 (276)
+|.+|+|+|..+.+
T Consensus 533 gG~~g~e~A~~L~~ 546 (690)
T 3k30_A 533 HYYLGGVVAELLAQ 546 (690)
T ss_dssp CSSHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHh
Confidence 99999999988764
No 18
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.57 E-value=1.3e-15 Score=131.39 Aligned_cols=140 Identities=19% Similarity=0.247 Sum_probs=103.1
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEE-EcCCCccceeeeec-----CCCCC---CcHHHHHHHHHHHHhcCcEEE
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTV-FERNDRVGGLLQYG-----IPTMK---LSKEVVQRRVKLLAAEGIEFK 184 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtv-ie~~~~~gg~~~~~-----~~~~~---~~~~~~~~~~~~l~~~gv~i~ 184 (276)
+.|||+||+ |+.+|..|++.|++|+| +|+ +.+||.|.+. .|..+ ...++..++.+.+.+.+++++
T Consensus 7 vvIIG~G~a-----Gl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 80 (315)
T 3r9u_A 7 VAIIGGGPA-----GLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHE 80 (315)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEE
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEE
Confidence 445999999 99999999999999999 999 6677766432 22222 346778888888888999998
Q ss_pred eeeeecc-c---------cchhhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCCCC
Q psy12810 185 TNINVGK-D---------IAAKELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSPIS 251 (276)
Q Consensus 185 ~~~~v~~-~---------~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~~~ 251 (276)
+++.... + ..... .+.||+||+|||+. |+.+++||.+. .++.+... .+. . .
T Consensus 81 ~~~v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~-~~~~~~~g~~~~~~~~~~~~~~-~~~---~----------~ 144 (315)
T 3r9u_A 81 MVGVEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGSA-PKKAGFKGEDEFFGKGVSTCAT-CDG---F----------F 144 (315)
T ss_dssp CCCEEEEEECTTSCEEEEETTSC-EEEEEEEEECCCEE-ECCCCCBTTTTTBTTTEESCHH-HHG---G----------G
T ss_pred EEEEEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCCC-CCCCCCCChhhcCCCeEEeeec-ccc---c----------c
Confidence 8743322 0 11122 57899999999997 88888988764 44444322 221 1 2
Q ss_pred CCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 252 AKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 252 ~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
..+++++|||+|++|+|+|..+.+
T Consensus 145 ~~~~~v~viG~g~~~~e~a~~l~~ 168 (315)
T 3r9u_A 145 YKNKEVAVLGGGDTALEEALYLAN 168 (315)
T ss_dssp GTTSEEEEECCBHHHHHHHHHHHT
T ss_pred cCcCEEEEECCCHHHHHHHHHHHh
Confidence 568999999999999999998875
No 19
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.57 E-value=1.9e-15 Score=145.33 Aligned_cols=141 Identities=16% Similarity=0.177 Sum_probs=101.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec--CCCCCCcHHHHHHHHHHHHh------cCcEEEe
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG--IPTMKLSKEVVQRRVKLLAA------EGIEFKT 185 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~--~~~~~~~~~~~~~~~~~l~~------~gv~i~~ 185 (276)
+.|||+||+ |+++|..|++.|++|+|||+.+.+||.+.+. .|.......+..+..+.+.. .++++..
T Consensus 392 VvIIGgGpA-----Gl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~ 466 (729)
T 1o94_A 392 VLIVGAGPS-----GSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALG 466 (729)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECS
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEe
Confidence 445999999 9999999999999999999999999877652 22222223333333333332 2678777
Q ss_pred eeeeccccchhhhhcccCEEEEcCCCCC-------CCCCCCCCcC--CCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCe
Q psy12810 186 NINVGKDIAAKELYEEFDALLLCTGATW-------PRDLPIPGRQ--LSGIYFAMSFLESWQKKQMGNENVSPISAKDKN 256 (276)
Q Consensus 186 ~~~v~~~~~~~~~~~~~D~vVlAtG~~~-------p~~~~i~g~~--~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~ 256 (276)
++.++. .+...+.||+||+|||+.+ |+.+++||.+ .+++++..++++.. ...+++
T Consensus 467 ~~~v~~---~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~-------------~~~gk~ 530 (729)
T 1o94_A 467 QKPMTA---DDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGK-------------KKIGKR 530 (729)
T ss_dssp CCCCCH---HHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCC-------------SCCCSE
T ss_pred CeEEeh---hhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCC-------------CCCCCe
Confidence 665532 2234578999999999871 4567889887 66888876665420 256899
Q ss_pred EEEEc--CChHHHHHHHHhhc
Q psy12810 257 VIVIG--GGDTGCDCIATSLR 275 (276)
Q Consensus 257 vvVIG--gG~~G~E~A~~~~r 275 (276)
|+||| ||++|+|+|..+.+
T Consensus 531 VvVIG~GgG~~g~e~A~~l~~ 551 (729)
T 1o94_A 531 VVILNADTYFMAPSLAEKLAT 551 (729)
T ss_dssp EEEEECCCSSHHHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHHH
Confidence 99999 99999999998875
No 20
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.57 E-value=2.7e-15 Score=130.38 Aligned_cols=142 Identities=23% Similarity=0.288 Sum_probs=100.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec-----CCCC---CCcHHHHHHHHHHHHhcCcEEE
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG-----IPTM---KLSKEVVQRRVKLLAAEGIEFK 184 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~-----~~~~---~~~~~~~~~~~~~l~~~gv~i~ 184 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+. .+||.+.+. .+.+ ....++...+.+.+.+.|++++
T Consensus 10 dvvIIG~G~a-----Gl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 83 (325)
T 2q7v_A 10 DVVIIGGGPA-----GLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVE 83 (325)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEECCCHH-----HHHHHHHHHHcCCcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 3445999999 999999999999999999998 567766431 2222 1235677777778888899988
Q ss_pred eeeeeccccc--h---------hhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCCC
Q psy12810 185 TNINVGKDIA--A---------KELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSPI 250 (276)
Q Consensus 185 ~~~~v~~~~~--~---------~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~~ 250 (276)
.+.....+.. + +...+.||+||+|+|++ |+.+++||.+. .++.+.. ..+. .
T Consensus 84 ~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~-~~~~~i~g~~~~~~~~~~~~~-~~~~---~---------- 148 (325)
T 2q7v_A 84 MDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGAD-PRKLGIPGEDNFWGKGVSTCA-TCDG---F---------- 148 (325)
T ss_dssp ECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEE-ECCCCCTTTTTTBTTTEESCH-HHHG---G----------
T ss_pred eeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCC-cCCCCCCChhhccCceEEEec-cCCH---H----------
Confidence 7532221111 1 12357899999999998 88888888753 3444322 1221 1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 251 SAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 251 ~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
...+++++|||+|++|+|+|..+.+
T Consensus 149 ~~~~~~v~VvG~G~~g~e~A~~l~~ 173 (325)
T 2q7v_A 149 FYKGKKVVVIGGGDAAVEEGMFLTK 173 (325)
T ss_dssp GGTTCEEEEECCSHHHHHHHHHHTT
T ss_pred HcCCCEEEEECCCHHHHHHHHHHHh
Confidence 2567999999999999999988765
No 21
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.57 E-value=2e-15 Score=137.55 Aligned_cols=66 Identities=48% Similarity=0.733 Sum_probs=61.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeecCCCCCCCHHHHHHHHHHHHhCCCeEEeccccC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVG 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 109 (276)
+||||+||.. |+++||+|+|||+.+.+||++.|++|.++.++++.++..+.+++.||++++++.++
T Consensus 131 GpAGl~aA~~-L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 196 (456)
T 2vdc_G 131 GPAGLAAAEE-LRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG 196 (456)
T ss_dssp SHHHHHHHHH-HHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT
T ss_pred CHHHHHHHHH-HHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec
Confidence 6999999999 89999999999999999999999999999999999999999999999999987654
No 22
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.56 E-value=8.3e-16 Score=142.91 Aligned_cols=146 Identities=18% Similarity=0.193 Sum_probs=104.6
Q ss_pred chhhhccCCCCCCCCCCCCcchhhh-hCCcEEEEEcCCCccceeeeec-CCC---------------------------C
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVN-IVGHSVTVFERNDRVGGLLQYG-IPT---------------------------M 162 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~-~~G~~Vtvie~~~~~gg~~~~~-~~~---------------------------~ 162 (276)
..+.|||+|++ |+.+|..|+ +.|.+|+|||+.+.+||.|... .|. +
T Consensus 9 ~dVvIIGaG~a-----Gl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~ 83 (540)
T 3gwf_A 9 VDAVVIGAGFG-----GIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTY 83 (540)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSE
T ss_pred CCEEEECcCHH-----HHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccC
Confidence 34455999999 999999999 9999999999999998877532 110 0
Q ss_pred CCcHHHHHHHHHHHHhcCc--EEEeeeeecc-c---------cc-hhhhhcccCEEEEcCCCC-CCCCCCCCCcC-CCC-
Q psy12810 163 KLSKEVVQRRVKLLAAEGI--EFKTNINVGK-D---------IA-AKELYEEFDALLLCTGAT-WPRDLPIPGRQ-LSG- 226 (276)
Q Consensus 163 ~~~~~~~~~~~~~l~~~gv--~i~~~~~v~~-~---------~~-~~~~~~~~D~vVlAtG~~-~p~~~~i~g~~-~~g- 226 (276)
....++..++.+.+++.|+ ++++++.|+. + +. .+..++.||.||+|+|.. .|+.|++||.+ +.+
T Consensus 84 ~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~ 163 (540)
T 3gwf_A 84 ITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGE 163 (540)
T ss_dssp EEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSE
T ss_pred CCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCC
Confidence 1124566677777788888 7888887651 1 11 112257899999999952 38899999987 344
Q ss_pred eeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 227 IYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 227 v~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
++++..+.+. ....+|+|+|||+|.+|+|+|.++.+
T Consensus 164 ~~~~~~~~~~-------------~~~~~krV~VIG~G~sgve~a~~l~~ 199 (540)
T 3gwf_A 164 TIHTAAWPEG-------------KSLAGRRVGVIGTGSTGQQVITSLAP 199 (540)
T ss_dssp EEEGGGCCSS-------------CCCTTSEEEEECCSHHHHHHHHHHTT
T ss_pred EEEeecCCCc-------------cccccceEEEECCCchHHHHHHHHHh
Confidence 3443332221 12678999999999999999998865
No 23
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.56 E-value=5.9e-16 Score=134.51 Aligned_cols=141 Identities=15% Similarity=0.217 Sum_probs=103.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec--------CCCCC--CcHHHHHHHHHHHHhcCcEE
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG--------IPTMK--LSKEVVQRRVKLLAAEGIEF 183 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~--------~~~~~--~~~~~~~~~~~~l~~~gv~i 183 (276)
+.|||+|++ |+.+|..|++.|++|+|||+.+.+||.|.+. .+.++ ...++..++.+.+.+.++++
T Consensus 10 vvIIG~G~a-----Gl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (332)
T 3lzw_A 10 ITIIGGGPV-----GLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTI 84 (332)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEE
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcE
Confidence 445999999 9999999999999999999999998877532 22222 24667777888888889999
Q ss_pred Eeeeeecc-c--------cchhhhhcccCEEEEcCCC---CCCCCCCCCCcCC-C--CeeehHHHHHHHHHhhcCCCCCC
Q psy12810 184 KTNINVGK-D--------IAAKELYEEFDALLLCTGA---TWPRDLPIPGRQL-S--GIYFAMSFLESWQKKQMGNENVS 248 (276)
Q Consensus 184 ~~~~~v~~-~--------~~~~~~~~~~D~vVlAtG~---~~p~~~~i~g~~~-~--gv~~~~~~l~~~~~~~~~~~~~~ 248 (276)
++++.|.. + +.....++.||.||+|||. . |+.+++||.+. . ++.. .+.+.
T Consensus 85 ~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~~-p~~~~~~g~~~~~g~~~~~--~~~~~------------ 149 (332)
T 3lzw_A 85 CLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNGAFK-PRKLELENAEQYEGKNLHY--FVDDL------------ 149 (332)
T ss_dssp ECSCCEEEEEECTTSCEEEEESSEEEEEEEEEECCTTSCCE-ECCCCCTTGGGGBTTTEES--SCSCG------------
T ss_pred EccCEEEEEEECCCCcEEEEECCCEEEeCEEEECCCCCcCC-CCCCCCCChhhccCceEEE--ecCCH------------
Confidence 99887652 1 1111123779999999999 6 88888888763 2 2322 11110
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 249 PISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 249 ~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
....+++++|||+|.+|+|+|..+.+
T Consensus 150 -~~~~~~~v~vvG~g~~~~e~a~~l~~ 175 (332)
T 3lzw_A 150 -QKFAGRRVAILGGGDSAVDWALMLEP 175 (332)
T ss_dssp -GGGBTCEEEEECSSHHHHHHHHHHTT
T ss_pred -HHcCCCEEEEECCCHhHHHHHHHHHh
Confidence 01468999999999999999998765
No 24
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.56 E-value=1.8e-15 Score=136.08 Aligned_cols=145 Identities=14% Similarity=0.275 Sum_probs=99.5
Q ss_pred hhccCCCCCCCCCCCCcchhhhhCCcE--EEEEcCCCccceeeeecCCC-----CCCcHHHHHHHHHHHHhcCcEEEeee
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIVGHS--VTVFERNDRVGGLLQYGIPT-----MKLSKEVVQRRVKLLAAEGIEFKTNI 187 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~G~~--Vtvie~~~~~gg~~~~~~~~-----~~~~~~~~~~~~~~l~~~gv~i~~~~ 187 (276)
.|||+|++ |+.+|..|++.|++ |+|||+++..+ +.+..++. ......+ ....+++.+.++++++++
T Consensus 6 vIIGaG~A-----Gl~aA~~L~~~g~~~~V~li~~~~~~~-y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~~ 78 (410)
T 3ef6_A 6 AIIGNGVG-----GFTTAQALRAEGFEGRISLIGDEPHLP-YDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLTGP 78 (410)
T ss_dssp EEECCSHH-----HHHHHHHHHHTTCCSEEEEEECSSSSS-BCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEESC
T ss_pred EEEcccHH-----HHHHHHHHHccCcCCeEEEEECCCCCC-cCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEeCC
Confidence 34999999 99999999999987 99999998754 11110000 0000011 122345677899999997
Q ss_pred eecc-cc-----c-hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEE
Q psy12810 188 NVGK-DI-----A-AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260 (276)
Q Consensus 188 ~v~~-~~-----~-~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVI 260 (276)
.+.. +. . .+...+.||+||+|||+. |+.|++||.+.+++++..++.+....... ...+++++||
T Consensus 79 ~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~-p~~~~ipG~~~~~v~~~~~~~d~~~l~~~--------~~~~~~vvVi 149 (410)
T 3ef6_A 79 EVTALDVQTRTISLDDGTTLSADAIVIATGSR-ARTMALPGSQLPGVVTLRTYGDVQVLRDS--------WTSATRLLIV 149 (410)
T ss_dssp CEEEEETTTTEEEETTSCEEECSEEEECCCEE-ECCCCCTTTTSTTEECCCSHHHHHHHHHH--------CCTTCEEEEE
T ss_pred EEEEEECCCCEEEECCCCEEECCEEEEccCCc-ccCCCCCCccccceEEeccHHHHHHHHHH--------hccCCeEEEE
Confidence 6641 11 1 122367899999999998 99999999887888765443222221111 2568999999
Q ss_pred cCChHHHHHHHHhhc
Q psy12810 261 GGGDTGCDCIATSLR 275 (276)
Q Consensus 261 GgG~~G~E~A~~~~r 275 (276)
|+|++|+|+|..+.+
T Consensus 150 GgG~~g~E~A~~l~~ 164 (410)
T 3ef6_A 150 GGGLIGCEVATTARK 164 (410)
T ss_dssp CCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 999999999998765
No 25
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.56 E-value=1.7e-15 Score=149.49 Aligned_cols=146 Identities=15% Similarity=0.111 Sum_probs=108.2
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec----CCCCCCcHHHHHHHHHHHHhc-CcEEEeeee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG----IPTMKLSKEVVQRRVKLLAAE-GIEFKTNIN 188 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~----~~~~~~~~~~~~~~~~~l~~~-gv~i~~~~~ 188 (276)
+.|||+||+ |+.+|..|++.|++|+|||+++.+||.+.+. ++. ....++.....+.+.+. ++++++++.
T Consensus 131 VvVIGaGpA-----Gl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~-~~~~~~~~~~~~~l~~~~~v~~~~~~~ 204 (965)
T 2gag_A 131 VLVVGAGPA-----GLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDG-MDSSAWIEQVTSELAEAEETTHLQRTT 204 (965)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETT-EEHHHHHHHHHHHHHHSTTEEEESSEE
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCC-CCHHHHHHHHHHHHhhcCCcEEEeCCE
Confidence 446999999 9999999999999999999999888766531 111 11345555566667665 999998876
Q ss_pred ecc-c----------------cc-------hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCC
Q psy12810 189 VGK-D----------------IA-------AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGN 244 (276)
Q Consensus 189 v~~-~----------------~~-------~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~ 244 (276)
+.. + .. .+...+.||+||+|||+. |+.+++||.+.++++++.++.+..+...
T Consensus 205 V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~-p~~~~ipG~~~~gv~~~~~~~~~l~~~~--- 280 (965)
T 2gag_A 205 VFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAH-ERPIVFENNDRPGIMLAGAVRSYLNRYG--- 280 (965)
T ss_dssp EEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEE-ECCCCCBTCCSTTEEEHHHHHHHHHTTC---
T ss_pred EEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCc-cCCCCCCCCCCCCEEEhHHHHHHHHhcC---
Confidence 531 0 00 111357899999999998 9999999999899998766433222110
Q ss_pred CCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 245 ENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 245 ~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
...+++++|||+|++|+|+|..+.+
T Consensus 281 ------~~~gk~vvViGgG~~g~E~A~~L~~ 305 (965)
T 2gag_A 281 ------VRAGARIAVATTNDSAYELVRELAA 305 (965)
T ss_dssp ------EESCSSEEEEESSTTHHHHHHHHGG
T ss_pred ------CCCCCeEEEEcCCHHHHHHHHHHHH
Confidence 1467999999999999999998875
No 26
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.56 E-value=8.5e-16 Score=142.97 Aligned_cols=151 Identities=21% Similarity=0.257 Sum_probs=101.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecC-CC---------------------------CCC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGI-PT---------------------------MKL 164 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~-~~---------------------------~~~ 164 (276)
.+.|||+|++ |+.+|..|++.|.+|+|||+.+.+||.|.... |. +..
T Consensus 11 dVvIIGaG~a-----Gl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~ 85 (545)
T 3uox_A 11 DAVVIGAGVT-----GIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFAS 85 (545)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCB
T ss_pred CEEEECccHH-----HHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCC
Confidence 4455999999 99999999999999999999999988775321 10 112
Q ss_pred cHHHHHHHHHHHHhcCc--EEEeeeeecc-c---------cc-hhhhhcccCEEEEcCC--CCCCCCCCCCCcCC-CC-e
Q psy12810 165 SKEVVQRRVKLLAAEGI--EFKTNINVGK-D---------IA-AKELYEEFDALLLCTG--ATWPRDLPIPGRQL-SG-I 227 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv--~i~~~~~v~~-~---------~~-~~~~~~~~D~vVlAtG--~~~p~~~~i~g~~~-~g-v 227 (276)
..++..++.+.+++.++ ++++++.|+. + +. .+..++.||.||+|+| +. |+.|++||.+. .+ +
T Consensus 86 ~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~-p~~p~ipG~~~f~g~~ 164 (545)
T 3uox_A 86 QPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSA-SRMPDIKGIDSFKGES 164 (545)
T ss_dssp HHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC----CCCTTGGGCCSEE
T ss_pred HHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCC-CcCCCCCCccccCCCe
Confidence 35666667777777777 7788776641 1 11 1223678999999999 66 89999999773 44 3
Q ss_pred eehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 228 YFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 228 ~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
++...+.++..... .. ....+|+|+|||+|.+|+|+|.++.+
T Consensus 165 ~h~~~~~~~~~~~~----~~--~~~~~krV~VIG~G~tgve~a~~la~ 206 (545)
T 3uox_A 165 FHSSRWPTDAEGAP----KG--VDFTGKRVGVIGTGATGVQIIPIAAE 206 (545)
T ss_dssp EEGGGCCBCTTSCB----SC--CCCBTCEEEEECCSHHHHHHHHHHTT
T ss_pred EEcccccccccccc----cc--cccCCCeEEEECCCccHHHHHHHHHh
Confidence 44333221100000 00 12578999999999999999998865
No 27
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.55 E-value=1.1e-15 Score=142.26 Aligned_cols=146 Identities=16% Similarity=0.194 Sum_probs=105.0
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec--------CCC--------------------CC
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG--------IPT--------------------MK 163 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~--------~~~--------------------~~ 163 (276)
..+.|||+|++ |+.+|..|++.|++|+|||+.+.+||.|.+. .|. +.
T Consensus 22 ~dVvIIGaG~a-----Gl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~ 96 (549)
T 4ap3_A 22 YDVVVVGAGIA-----GLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYA 96 (549)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSC
T ss_pred CCEEEECchHH-----HHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCC
Confidence 34455999999 9999999999999999999999999877522 110 11
Q ss_pred CcHHHHHHHHHHHHhcCc--EEEeeeeecc-c---------cc-hhhhhcccCEEEEcCC--CCCCCCCCCCCcC-CCC-
Q psy12810 164 LSKEVVQRRVKLLAAEGI--EFKTNINVGK-D---------IA-AKELYEEFDALLLCTG--ATWPRDLPIPGRQ-LSG- 226 (276)
Q Consensus 164 ~~~~~~~~~~~~l~~~gv--~i~~~~~v~~-~---------~~-~~~~~~~~D~vVlAtG--~~~p~~~~i~g~~-~~g- 226 (276)
...++..++.+.+++.++ ++++++.|+. + +. .+..++.||.||+|+| +. |+.|++||.+ +.+
T Consensus 97 ~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~-p~~p~ipG~~~f~g~ 175 (549)
T 4ap3_A 97 TQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSN-ANTPAFDGLDRFTGD 175 (549)
T ss_dssp BHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEE-CCCCCCTTGGGCCSE
T ss_pred CHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCC-CCCCCCCCcccCCCc
Confidence 224566677777788887 7888877651 1 11 1123478999999999 65 8999999987 344
Q ss_pred eeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 227 IYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 227 v~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
++++..+.+. .. ...+|+|+|||+|.+|+|+|.++.+
T Consensus 176 ~~~~~~~~~~----------~~--~~~~krV~VIG~G~sgve~a~~l~~ 212 (549)
T 4ap3_A 176 IVHTARWPHD----------GV--DFTGKRVGVIGTGSSGIQSIPIIAE 212 (549)
T ss_dssp EEEGGGCCTT----------CC--CCBTCEEEEECCSHHHHHHHHHHHH
T ss_pred eEEecccccc----------cc--ccCCCEEEEECCCchHHHHHHHHHh
Confidence 3444332210 00 2578999999999999999988764
No 28
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.55 E-value=9e-16 Score=139.57 Aligned_cols=148 Identities=22% Similarity=0.310 Sum_probs=100.9
Q ss_pred hhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCCccceeeeecCCC-----CCCcHHHHHHHHHHHHhcCcEEEeee
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERNDRVGGLLQYGIPT-----MKLSKEVVQRRVKLLAAEGIEFKTNI 187 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~~~gg~~~~~~~~-----~~~~~~~~~~~~~~l~~~gv~i~~~~ 187 (276)
.|||+|++ |+.+|..|++. |.+|+|||+++.++ +++.+++. ....+++.....+.+.+.|++++.++
T Consensus 4 vIIG~G~a-----Gl~aA~~l~~~~~g~~V~lie~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 77 (447)
T 1nhp_A 4 IVLGSSHG-----GYEAVEELLNLHPDAEIQWYEKGDFIS-FLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNT 77 (447)
T ss_dssp EEECSSHH-----HHHHHHHHHHHCTTSEEEEEESSSSSS-BCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETE
T ss_pred EEECCCHH-----HHHHHHHHHHhCcCCeEEEEECCCccC-cccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECC
Confidence 34999999 99999999987 99999999988764 33322110 01112222223455677899998887
Q ss_pred eec-cc-------cc----hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCC
Q psy12810 188 NVG-KD-------IA----AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDK 255 (276)
Q Consensus 188 ~v~-~~-------~~----~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k 255 (276)
.+. .+ .. ++..++.||+||+|||++ |+.|++||.+.+++++..++.+......... ...++
T Consensus 78 ~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~-p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~------~~~~~ 150 (447)
T 1nhp_A 78 EITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAV-PFELDIPGKDLDNIYLMRGRQWAIKLKQKTV------DPEVN 150 (447)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE-ECCCCSTTTTSBSEECCCHHHHHHHHHHHHT------CTTCC
T ss_pred EEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCC-cCCCCCCCCCCCCeEEECCHHHHHHHHHHhh------hcCCC
Confidence 763 11 11 111247899999999998 9999999988778887655433222111100 02689
Q ss_pred eEEEEcCChHHHHHHHHhhc
Q psy12810 256 NVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 256 ~vvVIGgG~~G~E~A~~~~r 275 (276)
+++|||+|++|+|+|..+.+
T Consensus 151 ~vvIiG~G~~g~e~A~~l~~ 170 (447)
T 1nhp_A 151 NVVVIGSGYIGIEAAEAFAK 170 (447)
T ss_dssp EEEEECCSHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHH
Confidence 99999999999999988765
No 29
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.54 E-value=4e-15 Score=136.00 Aligned_cols=141 Identities=24% Similarity=0.295 Sum_probs=96.9
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee--------------------------cCCCC--CCc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY--------------------------GIPTM--KLS 165 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~--------------------------~~~~~--~~~ 165 (276)
+.|||+||+ |+.+|..|++.|++|+|||++ .+||.|.+ +++.. ..+
T Consensus 7 vvIIGgG~a-----Gl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 80 (467)
T 1zk7_A 7 VAVIGSGGA-----AMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTID 80 (467)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCC
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccC
Confidence 445999999 999999999999999999998 56665321 12110 111
Q ss_pred -HHHHH-------H-----HHHHHHhc-CcEEEeeeeeccc-----c---chhhhhcccCEEEEcCCCCCCCCCCCCCcC
Q psy12810 166 -KEVVQ-------R-----RVKLLAAE-GIEFKTNINVGKD-----I---AAKELYEEFDALLLCTGATWPRDLPIPGRQ 223 (276)
Q Consensus 166 -~~~~~-------~-----~~~~l~~~-gv~i~~~~~v~~~-----~---~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~ 223 (276)
..+.. . ..+.+++. |++++.++....+ + +++...+.||+||+|||++ |+.|++||.+
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~-p~~p~i~G~~ 159 (467)
T 1zk7_A 81 RSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGAS-PAVPPIPGLK 159 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEE-ECCCCCTTTT
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCC-CCCCCCCCCC
Confidence 12211 1 12345566 9999887632211 1 1111468899999999998 9999999987
Q ss_pred CCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 224 LSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 224 ~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
..++++..++++. ...+++++|||+|++|+|+|..+.+
T Consensus 160 ~~~~~~~~~~~~~--------------~~~~~~vvViGgG~~g~E~A~~l~~ 197 (467)
T 1zk7_A 160 ESPYWTSTEALAS--------------DTIPERLAVIGSSVVALELAQAFAR 197 (467)
T ss_dssp TSCCBCHHHHHHC--------------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred cCceecHHHHhcc--------------cccCCEEEEECCCHHHHHHHHHHHH
Confidence 6666665443321 1457999999999999999998765
No 30
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.54 E-value=3.8e-15 Score=129.75 Aligned_cols=144 Identities=21% Similarity=0.237 Sum_probs=100.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcC----CCccceeeee-----cCCCCC---CcHHHHHHHHHHHHhcCc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFER----NDRVGGLLQY-----GIPTMK---LSKEVVQRRVKLLAAEGI 181 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~----~~~~gg~~~~-----~~~~~~---~~~~~~~~~~~~l~~~gv 181 (276)
+.|||+||+ |+.+|..|++.|++|+|||+ ...+||.+.+ ..|.++ ...++...+.+.+.+.|+
T Consensus 11 vvIIG~G~a-----Gl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv 85 (333)
T 1vdc_A 11 LCIVGSGPA-----AHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGT 85 (333)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCC
Confidence 445999999 99999999999999999998 5566665532 122221 235677777778888899
Q ss_pred EEEeeeeecccc-------chhhhhcccCEEEEcCCCCCCCCCCCCCcCC-------CCeeehHHHHHHHHHhhcCCCCC
Q psy12810 182 EFKTNINVGKDI-------AAKELYEEFDALLLCTGATWPRDLPIPGRQL-------SGIYFAMSFLESWQKKQMGNENV 247 (276)
Q Consensus 182 ~i~~~~~v~~~~-------~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~-------~gv~~~~~~l~~~~~~~~~~~~~ 247 (276)
+++.++....+. ..+...+.+|.||+|+|++ |..+++||.+. .++.+.. ..+. ..
T Consensus 86 ~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~vv~A~G~~-~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~---~~------ 154 (333)
T 1vdc_A 86 TIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAV-AKRLSFVGSGEVLGGFWNRGISACA-VCDG---AA------ 154 (333)
T ss_dssp EEECCCCCEEECSSSSEEEECSSEEEEEEEEEECCCEE-ECCCCCBTCSSSSSCCBTTTEESCH-HHHT---TS------
T ss_pred EEEEeEEEEEEEcCCEEEEEECCcEEEcCEEEECCCCC-cCCCCCCCccccccccccCcEEEec-cCcc---ch------
Confidence 999886222211 1122357899999999998 88888888654 2333221 1211 10
Q ss_pred CCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 248 SPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 248 ~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
....+++|+|||+|++|+|+|..+.+
T Consensus 155 --~~~~~~~v~VvG~G~~g~e~A~~l~~ 180 (333)
T 1vdc_A 155 --PIFRNKPLAVIGGGDSAMEEANFLTK 180 (333)
T ss_dssp --GGGTTSEEEEECCSHHHHHHHHHHTT
T ss_pred --hhcCCCeEEEECCChHHHHHHHHHHh
Confidence 01468999999999999999998765
No 31
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.54 E-value=4.8e-15 Score=128.12 Aligned_cols=140 Identities=19% Similarity=0.216 Sum_probs=102.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-----cCCCCC--CcHHHHHHHHHHHHhcCcEEEe
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-----GIPTMK--LSKEVVQRRVKLLAAEGIEFKT 185 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-----~~~~~~--~~~~~~~~~~~~l~~~gv~i~~ 185 (276)
.+.|||+|++ |+.+|..|++.|++|+|||+. +||.|.+ ..|.++ ...++..++.+.+.+.|+++++
T Consensus 17 ~vvIIG~G~a-----Gl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 89 (323)
T 3f8d_A 17 DVIIVGLGPA-----AYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL 89 (323)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEECccHH-----HHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE
Confidence 3445999999 999999999999999999998 7776653 233322 2356777778888889999988
Q ss_pred eeeec-cc-------cc-hhhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCCCCCC
Q psy12810 186 NINVG-KD-------IA-AKELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSPISAK 253 (276)
Q Consensus 186 ~~~v~-~~-------~~-~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~~~~~ 253 (276)
+.+. .+ +. .+..++.||.||+|+|+. |+.+++||.+. +++.+. .+.+. . ...
T Consensus 90 -~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~-~~~~~i~g~~~~~~~~~~~~-~~~~~---~----------~~~ 153 (323)
T 3f8d_A 90 -DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK-RRKLGVPGEQEFAGRGISYC-SVADA---P----------LFK 153 (323)
T ss_dssp -SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE-ECCCCCTTTTTTBTTTEESC-HHHHG---G----------GGT
T ss_pred -EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC-CccCCCCchhhhcCCceEEe-ccCCH---h----------HcC
Confidence 4443 11 11 122467899999999998 98889988764 555442 21221 1 257
Q ss_pred CCeEEEEcCChHHHHHHHHhhc
Q psy12810 254 DKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 254 ~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+++++|||+|++|+|+|..+.+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~ 175 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSS 175 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH
Confidence 8999999999999999988764
No 32
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.54 E-value=2.5e-15 Score=137.65 Aligned_cols=143 Identities=16% Similarity=0.202 Sum_probs=100.1
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee---------------------------cCCCC--C
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY---------------------------GIPTM--K 163 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~---------------------------~~~~~--~ 163 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+.+.+||.|.+ +++.. .
T Consensus 8 dvvIIGgG~a-----Gl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~ 82 (474)
T 1zmd_A 8 DVTVIGSGPG-----GYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVR 82 (474)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEE
T ss_pred CEEEECCCHH-----HHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCc
Confidence 3445999999 999999999999999999999888775431 11000 0
Q ss_pred Cc-HHHH-----------HHHHHHHHhcCcEEEeeeeeccc-----cc--h-hhhhcccCEEEEcCCCCCCCCCCCCCcC
Q psy12810 164 LS-KEVV-----------QRRVKLLAAEGIEFKTNINVGKD-----IA--A-KELYEEFDALLLCTGATWPRDLPIPGRQ 223 (276)
Q Consensus 164 ~~-~~~~-----------~~~~~~l~~~gv~i~~~~~v~~~-----~~--~-~~~~~~~D~vVlAtG~~~p~~~~i~g~~ 223 (276)
.+ ..+. ..+.+.+++.|++++.++.+..+ +. + ...++.||+||+|||++ |+.|+++|.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~-p~~p~i~g~~ 161 (474)
T 1zmd_A 83 LNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSE-VTPFPGITID 161 (474)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEE-ECCCTTCCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCC-CCCCCCCCCC
Confidence 01 1111 11245566789999998764311 11 1 12468899999999998 9989998877
Q ss_pred CCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 224 LSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 224 ~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
..+++++.+++. . ...+++++|||+|++|+|+|..+.+
T Consensus 162 ~~~v~t~~~~~~----~----------~~~~~~vvViGgG~~g~E~A~~l~~ 199 (474)
T 1zmd_A 162 EDTIVSSTGALS----L----------KKVPEKMVVIGAGVIGVELGSVWQR 199 (474)
T ss_dssp SSSEECHHHHTT----C----------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred cCcEEcHHHHhh----c----------cccCceEEEECCCHHHHHHHHHHHH
Confidence 666776544321 1 1346899999999999999998765
No 33
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.54 E-value=1.3e-14 Score=134.57 Aligned_cols=148 Identities=20% Similarity=0.270 Sum_probs=102.4
Q ss_pred ccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec--------------------------CCCCC
Q psy12810 110 KDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG--------------------------IPTMK 163 (276)
Q Consensus 110 ~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~--------------------------~~~~~ 163 (276)
....+.|||+|++ |+.+|..|++.|++|+|||+++.+||.+.+. ++...
T Consensus 42 ~~~dVvIIGgG~a-----Gl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~ 116 (523)
T 1mo9_A 42 REYDAIFIGGGAA-----GRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMT 116 (523)
T ss_dssp SCBSEEEECCSHH-----HHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCT
T ss_pred CcCCEEEECCCHH-----HHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHH
Confidence 3345556999999 9999999999999999999998777764321 11111
Q ss_pred C----cHHHHHHHH-------HHH-----HhcCcEEEeeeeec-cc---cchhhhhcccCEEEEcCCCCCCCCCCCCCcC
Q psy12810 164 L----SKEVVQRRV-------KLL-----AAEGIEFKTNINVG-KD---IAAKELYEEFDALLLCTGATWPRDLPIPGRQ 223 (276)
Q Consensus 164 ~----~~~~~~~~~-------~~l-----~~~gv~i~~~~~v~-~~---~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~ 223 (276)
. ..++...+. ..+ .+.+++++++..+. .+ +......+.||+||+|||+. |..|+++|.+
T Consensus 117 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~g~~~~~d~lViATGs~-p~~p~i~G~~ 195 (523)
T 1mo9_A 117 EKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILAVGAG-PGTLDVPGVN 195 (523)
T ss_dssp TCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEETTEEEEBSCEEECCCEE-CCCCCSTTTT
T ss_pred hhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEECCEEEEeCEEEECCCCC-CCCCCCCCcc
Confidence 1 223333322 445 67799998443332 11 11112357899999999998 9999999988
Q ss_pred CCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 224 LSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 224 ~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
..+++++.++++. .. ...+++++|||+|++|+|+|..+.+
T Consensus 196 ~~~v~~~~~~~~~---l~---------~~~g~~vvViGgG~~g~E~A~~l~~ 235 (523)
T 1mo9_A 196 AKGVFDHATLVEE---LD---------YEPGSTVVVVGGSKTAVEYGCFFNA 235 (523)
T ss_dssp SBTEEEHHHHHHH---CC---------SCCCSEEEEECCSHHHHHHHHHHHH
T ss_pred cCcEeeHHHHHHH---HH---------hcCCCeEEEECCCHHHHHHHHHHHH
Confidence 7778886665422 10 1234999999999999999998765
No 34
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.54 E-value=4.1e-15 Score=131.27 Aligned_cols=138 Identities=15% Similarity=0.124 Sum_probs=94.5
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCc-EEEEEcCCCccceeeee-----------------cCCC--------------
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGH-SVTVFERNDRVGGLLQY-----------------GIPT-------------- 161 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~-~Vtvie~~~~~gg~~~~-----------------~~~~-------------- 161 (276)
+.|||+|++ |+.+|..|++.|+ +|+|||+.+ +||.|.+ +++.
T Consensus 7 vvIIGaG~a-----Gl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 80 (369)
T 3d1c_A 7 VAIIGAGAA-----GIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTF 80 (369)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHH
T ss_pred EEEECcCHH-----HHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccc
Confidence 445999999 9999999999999 999999988 7765531 1100
Q ss_pred ---CCCcHHHHHHHHHHHHhcCcEEEeeeeec-cc-------cchhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeeh
Q psy12810 162 ---MKLSKEVVQRRVKLLAAEGIEFKTNINVG-KD-------IAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFA 230 (276)
Q Consensus 162 ---~~~~~~~~~~~~~~l~~~gv~i~~~~~v~-~~-------~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~ 230 (276)
+....++...+.+.+++.|+++++++.|. .+ +.....++.||.||+|+|++ +. |.+|+ ..+++.
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~d~vVlAtG~~-~~-p~ip~---~~~~~~ 155 (369)
T 3d1c_A 81 NEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTETYHADYIFVATGDY-NF-PKKPF---KYGIHY 155 (369)
T ss_dssp CCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCCEEEEEEEECCCST-TS-BCCCS---SSCEEG
T ss_pred cccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCCEEEeCEEEECCCCC-Cc-cCCCC---Cceech
Confidence 01113455556666778899999987664 11 11112257899999999997 54 45665 234443
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 231 MSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 231 ~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
.++.+. ....+++|+|||+|++|+|+|..+.+
T Consensus 156 ~~~~~~-------------~~~~~~~vvVvG~G~~g~e~a~~l~~ 187 (369)
T 3d1c_A 156 SEIEDF-------------DNFNKGQYVVIGGNESGFDAAYQLAK 187 (369)
T ss_dssp GGCSCG-------------GGSCSSEEEEECCSHHHHHHHHHHHH
T ss_pred hhcCCh-------------hhcCCCEEEEECCCcCHHHHHHHHHh
Confidence 332111 01467899999999999999998765
No 35
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.53 E-value=9.2e-16 Score=141.12 Aligned_cols=149 Identities=20% Similarity=0.236 Sum_probs=100.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCC---cEEEEEcCCCccceeeeecCC----CC-CCcHHHHHHHHHHHHhcCcEEEe
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVG---HSVTVFERNDRVGGLLQYGIP----TM-KLSKEVVQRRVKLLAAEGIEFKT 185 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G---~~Vtvie~~~~~gg~~~~~~~----~~-~~~~~~~~~~~~~l~~~gv~i~~ 185 (276)
+.|||+|++ |+.+|..|++.| .+|+|||+.+.++ ++..+++ .. ...+++.....+.+.+.|++++.
T Consensus 38 vvIIGaG~a-----Gl~aA~~l~~~g~~~~~V~lie~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~ 111 (490)
T 2bc0_A 38 IVVVGANHA-----GTACIKTMLTNYGDANEIVVFDQNSNIS-FLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYM 111 (490)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHHGGGSEEEEECSSSCCS-BCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEET
T ss_pred EEEECCCHH-----HHHHHHHHHhcCCCCCeEEEEECCCCCC-ccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEe
Confidence 445999999 999999999988 9999999988654 2222111 00 11111211223456678999988
Q ss_pred eeeec-cc-------cc--hhhhhcccCEEEEcCCCCCCCCCCCCCcC-----------CCCeeehHHHHHHHHHhhcCC
Q psy12810 186 NINVG-KD-------IA--AKELYEEFDALLLCTGATWPRDLPIPGRQ-----------LSGIYFAMSFLESWQKKQMGN 244 (276)
Q Consensus 186 ~~~v~-~~-------~~--~~~~~~~~D~vVlAtG~~~p~~~~i~g~~-----------~~gv~~~~~~l~~~~~~~~~~ 244 (276)
++.+. .+ .. ++..++.||+||+|||++ |+.|++||.+ .+++++..++.+..+......
T Consensus 112 ~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~-p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~ 190 (490)
T 2bc0_A 112 ESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQ-PILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLE 190 (490)
T ss_dssp TCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEE-ECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTT
T ss_pred CCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCC-cCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhh
Confidence 87654 11 11 113458899999999998 9999999987 567877555433332221110
Q ss_pred CCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 245 ENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 245 ~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
...+++++|||+|++|+|+|..+.+
T Consensus 191 ------~~~~~~vvVIGgG~ig~E~A~~l~~ 215 (490)
T 2bc0_A 191 ------NKDIKRVAVVGAGYIGVELAEAFQR 215 (490)
T ss_dssp ------STTCCEEEEECCSHHHHHHHHHHHH
T ss_pred ------hcCCceEEEECCCHHHHHHHHHHHH
Confidence 1468999999999999999998765
No 36
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.53 E-value=3.5e-15 Score=136.40 Aligned_cols=142 Identities=17% Similarity=0.226 Sum_probs=99.8
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee--------------------------cCCC---CCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY--------------------------GIPT---MKL 164 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~--------------------------~~~~---~~~ 164 (276)
+.|||+||+ |+.+|..|++.|++|+|||+.+.+||.|.. +++. ...
T Consensus 5 vvIIGgG~a-----Gl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (468)
T 2qae_A 5 VVVIGGGPG-----GYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTM 79 (468)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEE
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 445999999 999999999999999999999888775421 1110 000
Q ss_pred c-HHHH-----------HHHHHHHHhcCcEEEeeeeeccc-----cc---hhhhhcccCEEEEcCCCCCCCCCCCCCcCC
Q psy12810 165 S-KEVV-----------QRRVKLLAAEGIEFKTNINVGKD-----IA---AKELYEEFDALLLCTGATWPRDLPIPGRQL 224 (276)
Q Consensus 165 ~-~~~~-----------~~~~~~l~~~gv~i~~~~~v~~~-----~~---~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~ 224 (276)
+ ..+. ..+.+.+++.|++++.++.+..+ +. ++..++.||+||+|||+. |+.|+++|.+.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~-p~~p~~~g~~~ 158 (468)
T 2qae_A 80 DSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSE-PTELPFLPFDE 158 (468)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEE-ECCBTTBCCCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCC-cCCCCCCCCCc
Confidence 1 1111 11234566789999998864321 11 111468899999999998 88888888776
Q ss_pred CCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 225 SGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 225 ~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+++++..+++. + ...+++++|||+|++|+|+|..+.+
T Consensus 159 ~~v~t~~~~~~----~----------~~~~~~vvViGgG~~g~E~A~~l~~ 195 (468)
T 2qae_A 159 KVVLSSTGALA----L----------PRVPKTMVVIGGGVIGLELGSVWAR 195 (468)
T ss_dssp SSEECHHHHHT----C----------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred CceechHHHhh----c----------ccCCceEEEECCCHHHHHHHHHHHH
Confidence 67777544332 1 1357999999999999999998765
No 37
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.53 E-value=7.8e-16 Score=143.87 Aligned_cols=148 Identities=21% Similarity=0.253 Sum_probs=99.3
Q ss_pred hhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCCccceeeeecCCCC-----CCcHH-HHHHHHHHHHhcCcEEEee
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERNDRVGGLLQYGIPTM-----KLSKE-VVQRRVKLLAAEGIEFKTN 186 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~~~gg~~~~~~~~~-----~~~~~-~~~~~~~~l~~~gv~i~~~ 186 (276)
.|||+||+ |+++|..|++. |++|+|||+++.++ +.+.++|.+ ....+ +........++.+++++++
T Consensus 5 vIIGgG~A-----Gl~aA~~L~~~~~~~~V~lie~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 78 (565)
T 3ntd_A 5 LIIGGVAG-----GASAAARARRLSETAEIIMFERGEYVS-FANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVK 78 (565)
T ss_dssp EEECSSHH-----HHHHHHHHHHHCSSSEEEEECSSSCSS-BCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETT
T ss_pred EEECCCHH-----HHHHHHHHHhhCcCCCEEEEECCCCcc-ccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEEC
Confidence 34999999 99999999987 89999999999765 332222210 11111 1112222334579999988
Q ss_pred eeecc-c-------cc----hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCC
Q psy12810 187 INVGK-D-------IA----AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKD 254 (276)
Q Consensus 187 ~~v~~-~-------~~----~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~ 254 (276)
+.|+. + .. ++..++.||+||+|||++ |+.|++||.+.+++++..++.+........ ....+
T Consensus 79 ~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~-p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~------~~~~~ 151 (565)
T 3ntd_A 79 HEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAA-PIVPPIPGVDNPLTHSLRNIPDMDRILQTI------QMNNV 151 (565)
T ss_dssp EEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE-ECCCCCTTCCSTTEECCSSHHHHHHHHHHH------HHTTC
T ss_pred CEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCC-CCCCCCCCCCCCCEEEeCCHHHHHHHHHHH------hhCCC
Confidence 87751 1 11 222367899999999998 999999998877777654433221111000 01467
Q ss_pred CeEEEEcCChHHHHHHHHhhc
Q psy12810 255 KNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 255 k~vvVIGgG~~G~E~A~~~~r 275 (276)
++++|||+|++|+|+|..+.+
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~ 172 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHH 172 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh
Confidence 899999999999999998865
No 38
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.53 E-value=3.9e-15 Score=129.77 Aligned_cols=142 Identities=21% Similarity=0.352 Sum_probs=100.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec--------CCCCC--CcHHHHHHHHHHHHhcCcEE
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG--------IPTMK--LSKEVVQRRVKLLAAEGIEF 183 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~--------~~~~~--~~~~~~~~~~~~l~~~gv~i 183 (276)
+.|||+||+ |+.+|..|++.|++|+|||+.+.+||.|... .+.++ ...++...+.+.+.+.++++
T Consensus 8 vvIIG~G~a-----Gl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 82 (335)
T 2zbw_A 8 VLIVGAGPT-----GLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY 82 (335)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 445999999 9999999999999999999999888776422 22111 23567777777788889999
Q ss_pred Eeeeeecc-c-------cc-hhhhhcccCEEEEcCCCC--CCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCC
Q psy12810 184 KTNINVGK-D-------IA-AKELYEEFDALLLCTGAT--WPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSP 249 (276)
Q Consensus 184 ~~~~~v~~-~-------~~-~~~~~~~~D~vVlAtG~~--~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~ 249 (276)
++++.|.. + +. .+..++.||.||+|+|.. .|+.++++|.+. .++++. +.+ .
T Consensus 83 ~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~---~~~---~--------- 147 (335)
T 2zbw_A 83 SLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYA---VKS---K--------- 147 (335)
T ss_dssp EESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESS---CSC---G---------
T ss_pred EeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEe---cCc---h---------
Confidence 88877642 1 11 112357899999999984 277777887642 123221 000 0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 250 ISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 250 ~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
....+++++|||+|++|+|+|..+.+
T Consensus 148 ~~~~~~~v~viG~G~~g~e~a~~l~~ 173 (335)
T 2zbw_A 148 AEFQGKRVLIVGGGDSAVDWALNLLD 173 (335)
T ss_dssp GGGTTCEEEEECSSHHHHHHHHHTTT
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHh
Confidence 01468999999999999999998765
No 39
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.53 E-value=2.7e-15 Score=137.14 Aligned_cols=146 Identities=16% Similarity=0.210 Sum_probs=98.8
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-c-CCC--------------------CCCc-HHHH
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-G-IPT--------------------MKLS-KEVV 169 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-~-~~~--------------------~~~~-~~~~ 169 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+.+.+||.|.+ + +|. ...+ ..+.
T Consensus 6 DVvVIGgG~a-----Gl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
T 3l8k_A 6 DVVVIGAGGA-----GYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQ 80 (466)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHH
T ss_pred eEEEECCCHH-----HHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHH
Confidence 3445999999 999999999999999999999989887642 1 110 0011 1111
Q ss_pred ------------HHHHHHHHhcCcEEEeeeeeccc-----cc-hhhhh--cccCEEEEcCCCCCCCCCCCCCcCCCCeee
Q psy12810 170 ------------QRRVKLLAAEGIEFKTNINVGKD-----IA-AKELY--EEFDALLLCTGATWPRDLPIPGRQLSGIYF 229 (276)
Q Consensus 170 ------------~~~~~~l~~~gv~i~~~~~v~~~-----~~-~~~~~--~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~ 229 (276)
..+...+++.+++++.++....+ +. .+... +.||+||+|||+. |+.|++||.+ ++++
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~-p~~p~i~G~~--~~~t 157 (466)
T 3l8k_A 81 DRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAE-TAKLRLPGVE--YCLT 157 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEE-ECCCCCTTGG--GSBC
T ss_pred HHHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCC-ccCCCCCCcc--ceEe
Confidence 22233445578999888543211 11 11224 8899999999998 9999999976 5666
Q ss_pred hHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 230 AMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
..+++..... + ...+++++|||+|++|+|+|..+.++
T Consensus 158 ~~~~~~~~~~--------l--~~~~~~vvViGgG~~g~e~A~~l~~~ 194 (466)
T 3l8k_A 158 SDDIFGYKTS--------F--RKLPQDMVIIGAGYIGLEIASIFRLM 194 (466)
T ss_dssp HHHHHSTTCS--------C--CSCCSEEEEECCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH--------H--hhCCCeEEEECCCHHHHHHHHHHHHc
Confidence 5544311000 1 14579999999999999999988653
No 40
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.53 E-value=2.3e-15 Score=136.54 Aligned_cols=144 Identities=15% Similarity=0.185 Sum_probs=90.6
Q ss_pred hccCCCCCCCCCCCCcchhhhhCC--cEEEEEcCCCccceeeeecCCC----CCCcH--HHHHHHHHHHHhcCcEEEeee
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVG--HSVTVFERNDRVGGLLQYGIPT----MKLSK--EVVQRRVKLLAAEGIEFKTNI 187 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G--~~Vtvie~~~~~gg~~~~~~~~----~~~~~--~~~~~~~~~l~~~gv~i~~~~ 187 (276)
|||+||+ |+.+|..|++.| .+|+|||+++... +.+..+|. ...+. .+.....+++++.+++++.++
T Consensus 5 IIG~G~A-----Gl~aA~~l~~~g~~~~V~lie~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (437)
T 4eqs_A 5 VVGAVAG-----GATCASQIRRLDKESDIIIFEKDRDMS-FANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYH 78 (437)
T ss_dssp EECCSTT-----HHHHHHHHHHHCSSSCEEEEESSSCSS-BCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETE
T ss_pred EECCCHH-----HHHHHHHHHhCCCCCcEEEEeCCCCCC-CCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCC
Confidence 4999999 999999999988 4699999988653 11111110 00000 011112344567899999987
Q ss_pred eecc-c-----------cchhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCC
Q psy12810 188 NVGK-D-----------IAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDK 255 (276)
Q Consensus 188 ~v~~-~-----------~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k 255 (276)
.++. + .+.+..++.||+||||||++ |+.|+++|.....+.+..+......... ...++
T Consensus 79 ~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~-p~~p~i~g~~~~~~~~~~~~~~l~~~~~---------~~~~~ 148 (437)
T 4eqs_A 79 EVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGAS-ANSLGFESDITFTLRNLEDTDAIDQFIK---------ANQVD 148 (437)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEE-ECCCCCCCTTEECCSSHHHHHHHHHHHH---------HHTCC
T ss_pred eEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCc-cccccccCceEEeeccHHHHHHHHHhhh---------ccCCc
Confidence 7641 1 11223457899999999998 9988888743211112122111111111 14578
Q ss_pred eEEEEcCChHHHHHHHHhhc
Q psy12810 256 NVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 256 ~vvVIGgG~~G~E~A~~~~r 275 (276)
+++|||||++|+|+|..+.+
T Consensus 149 ~vvViGgG~ig~E~A~~l~~ 168 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYE 168 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHH
T ss_pred EEEEECCccchhhhHHHHHh
Confidence 99999999999999998765
No 41
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.52 E-value=6.3e-15 Score=127.15 Aligned_cols=140 Identities=21% Similarity=0.272 Sum_probs=99.0
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCc-EEEEEcCCCccceeeeec-----CCCC---CCcHHHHHHHHHHHHhcCcEEE
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGH-SVTVFERNDRVGGLLQYG-----IPTM---KLSKEVVQRRVKLLAAEGIEFK 184 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~-~Vtvie~~~~~gg~~~~~-----~~~~---~~~~~~~~~~~~~l~~~gv~i~ 184 (276)
+.|||+||+ |+.+|..|++.|+ +|+|||+. .+||.+.+. .|.+ ....++...+.+.+.+.|++++
T Consensus 4 vvIIG~G~a-----Gl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~ 77 (311)
T 2q0l_A 4 CAIIGGGPA-----GLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHE 77 (311)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEE
T ss_pred EEEECccHH-----HHHHHHHHHHCCCCcEEEEcCC-CCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEE
Confidence 335999999 9999999999999 99999995 466655421 2221 2335677777777888899998
Q ss_pred eeeeec-cc-------c-chhhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCCCCC
Q psy12810 185 TNINVG-KD-------I-AAKELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSPISA 252 (276)
Q Consensus 185 ~~~~v~-~~-------~-~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~~~~ 252 (276)
.. .+. .+ + ..+...+.||.||+|+|++ |+.|++||.+. +++++... .+. . ..
T Consensus 78 ~~-~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~-~~~~~~~g~~~~~~~~~~~~~~-~~~---~----------~~ 141 (311)
T 2q0l_A 78 MT-AVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGS-PKRTGIKGESEYWGKGVSTCAT-CDG---F----------FY 141 (311)
T ss_dssp CS-CEEEEEEETTEEEEEETTSCEEEEEEEEECCCEE-ECCCCCBTHHHHBTTTEESCHH-HHG---G----------GG
T ss_pred EE-EEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCC-CCCCCCCChhhccCCcEEEeec-CCh---h----------hc
Confidence 73 332 11 1 1122357899999999998 88888888652 44544222 221 1 25
Q ss_pred CCCeEEEEcCChHHHHHHHHhhc
Q psy12810 253 KDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 253 ~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
.+++++|||+|++|+|+|..+.+
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~ 164 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLAN 164 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHh
Confidence 67999999999999999998765
No 42
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.52 E-value=8e-15 Score=140.20 Aligned_cols=164 Identities=19% Similarity=0.157 Sum_probs=118.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeec--CCCCCCCHHHHHHHHHHHHhC-CCeEEeccccCc--------c
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYG--IPTMKLSKEVVQRRVKLLAAE-GIEFKTNINVGK--------D 111 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~--~~~~~~~~~~~~~~~~~l~~~-gv~~~~~~~v~~--------~ 111 (276)
+||||+||+. |+++||+|+|||+++.+||++.+. .|.+.....+.++....+.+. ||++++++.+.. +
T Consensus 400 G~AGl~aA~~-La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~~~~~~~~d 478 (690)
T 3k30_A 400 GPSGLEAARA-LGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMTGDDIVEFGFE 478 (690)
T ss_dssp SHHHHHHHHH-HHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCCHHHHHHTTCC
T ss_pred CHHHHHHHHH-HHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeecHHHHhhcCCC
Confidence 6999999999 899999999999999999998763 577766788888999999998 999998865421 1
Q ss_pred chhhhccCCCC--------CC----------------------------------CCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 112 IAAKVTNHTPQ--------SD----------------------------------NQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 112 v~v~iiG~gp~--------~~----------------------------------g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
..+..+|+.|. .+ |++|+++|..|++.|.+|+++++.+
T Consensus 479 ~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 479 HVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp EEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 11112333211 00 2347788999999999999999888
Q ss_pred ccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc----------cchhhhhcccCEEEEcCCCCCCCC
Q psy12810 150 RVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD----------IAAKELYEEFDALLLCTGATWPRD 216 (276)
Q Consensus 150 ~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~----------~~~~~~~~~~D~vVlAtG~~~p~~ 216 (276)
.+.... .+......+.+.+++.||++++++.+..- .+++..++++|.||+|+|.. |+.
T Consensus 559 ~l~~~~--------~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~-p~~ 626 (690)
T 3k30_A 559 QVSSWT--------NNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARL-PRE 626 (690)
T ss_dssp STTGGG--------GGGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEE-ECC
T ss_pred cccccc--------ccchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCC-CCh
Confidence 653111 11222345667788899999999887510 12234468899999999998 764
No 43
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.52 E-value=1.2e-14 Score=124.22 Aligned_cols=142 Identities=11% Similarity=0.129 Sum_probs=100.1
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeee--ecCCCC--CCcHHHHHHHHHHHHhc-CcEEEeeee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQ--YGIPTM--KLSKEVVQRRVKLLAAE-GIEFKTNIN 188 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~--~~~~~~--~~~~~~~~~~~~~l~~~-gv~i~~~~~ 188 (276)
+.|||+|++ |+++|..|++.|++|+|||+.+..+.++. ++.+.. ....++...+.+.+.+. +++++....
T Consensus 5 vvIIG~G~a-----Gl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 79 (297)
T 3fbs_A 5 VIIIGGSYA-----GLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRV 79 (297)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCE
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEE
Confidence 335999999 99999999999999999999876554332 222221 23356777777878776 788866533
Q ss_pred eccc-------cc-hhhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeE
Q psy12810 189 VGKD-------IA-AKELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSPISAKDKNV 257 (276)
Q Consensus 189 v~~~-------~~-~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~v 257 (276)
...+ +. .+..++.||.||+|||.. |+.|++||.+. .+++++. +.+.. ...++++
T Consensus 80 ~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~-~~~~~~~g~~~~~~~~~~~~~-~~~~~-------------~~~~~~v 144 (297)
T 3fbs_A 80 TDAKGSFGEFIVEIDGGRRETAGRLILAMGVT-DELPEIAGLRERWGSAVFHCP-YCHGY-------------ELDQGKI 144 (297)
T ss_dssp EEEEEETTEEEEEETTSCEEEEEEEEECCCCE-EECCCCBTTGGGBTTTEESCH-HHHTG-------------GGTTCEE
T ss_pred EEEEEcCCeEEEEECCCCEEEcCEEEECCCCC-CCCCCCCCchhhcCCeeEEcc-cCcch-------------hhcCCEE
Confidence 2221 11 122358899999999998 88888988764 4444432 22211 1568999
Q ss_pred EEEcCChHHHHHHHHhhc
Q psy12810 258 IVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 258 vVIGgG~~G~E~A~~~~r 275 (276)
+|||+|++|+|+|..+.+
T Consensus 145 ~vvG~G~~~~e~a~~l~~ 162 (297)
T 3fbs_A 145 GVIAASPMAIHHALMLPD 162 (297)
T ss_dssp EEECCSTTHHHHHHHGGG
T ss_pred EEEecCccHHHHHHHhhh
Confidence 999999999999998875
No 44
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.52 E-value=6.5e-15 Score=141.54 Aligned_cols=200 Identities=14% Similarity=0.047 Sum_probs=123.1
Q ss_pred cchhHHHhhhhhh-ccccccceeeccccchhccccc-----------cccccc-----ccchhchHHHHHhhCCCeEEEe
Q psy12810 2 IWDHQLEKRLDNT-LIQECEPVLSGKVPRIDLEYTI-----------NNECRA-----FTATLSYHISIQHLVGHSVTVF 64 (276)
Q Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~paGl~aA~~~aa~~G~~V~l~ 64 (276)
.|.+ |. .|.+. ..+ .+..+|-+...+-+-.. .+.... +||||+||+. |+++||+|+||
T Consensus 344 ~ci~-Cn-~C~~~~~~~--~~~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~-L~~~G~~Vtli 418 (729)
T 1o94_A 344 VCIG-CN-VCISRWEIG--GPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARV-LMESGYTVHLT 418 (729)
T ss_dssp CCCC-CC-HHHHHHHHS--SSCCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHH-HHHTTCEEEEE
T ss_pred cccc-cc-hhccccccc--CCceeeccCccccccccccccccccccccCCceEEEECCCHHHHHHHHH-HHHCCCeEEEE
Confidence 4776 66 49887 666 67777866554422110 011111 5999999999 89999999999
Q ss_pred ccCCCCCceeeec--CCCCCCCHHHHHHHHHHHHhC------CCeEEeccccC--------ccchhhhccCCC-------
Q psy12810 65 ERNDRVGGLLQYG--IPTMKLSKEVVQRRVKLLAAE------GIEFKTNINVG--------KDIAAKVTNHTP------- 121 (276)
Q Consensus 65 Ek~~~lGG~~~~~--~~~~~~~~~~~~~~~~~l~~~------gv~~~~~~~v~--------~~v~v~iiG~gp------- 121 (276)
|+++.+||++.+. .|.+.......++....++.. ++++..+..+. -+..+..+|+.|
T Consensus 419 e~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~ 498 (729)
T 1o94_A 419 DTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALGQKPMTADDVLQYGADKVIIATGARWNTDGTNC 498 (729)
T ss_dssp CSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECSCCCCCHHHHHTSCCSEEEECCCEEECSSCCCT
T ss_pred eCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEeCeEEehhhccccCCCEEEEcCCCCcccccccC
Confidence 9999999999764 344443445555554444433 67776553321 111111223320
Q ss_pred -CC------------------------------------CCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCC
Q psy12810 122 -QS------------------------------------DNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKL 164 (276)
Q Consensus 122 -~~------------------------------------~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~ 164 (276)
.. -|.+|+++|..|++.|.+|+++++.+ +..... . ..
T Consensus 499 p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~--~---~~ 572 (729)
T 1o94_A 499 LTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMH--F---TL 572 (729)
T ss_dssp TTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHH--H---TT
T ss_pred ccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccc--c---cc
Confidence 00 02447888889999999999999877 431100 0 11
Q ss_pred cHHHHHHHHHHHHhcCcEEEeeeeeccc------c----chhhh------------------hcccCEEEEcCCCCCCCC
Q psy12810 165 SKEVVQRRVKLLAAEGIEFKTNINVGKD------I----AAKEL------------------YEEFDALLLCTGATWPRD 216 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv~i~~~~~v~~~------~----~~~~~------------------~~~~D~vVlAtG~~~p~~ 216 (276)
. ...+.+.+++.||++++++.+..- . .+... ++++|.||+|+|.. |+.
T Consensus 573 ~---~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~-p~~ 648 (729)
T 1o94_A 573 E---YPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH-SEC 648 (729)
T ss_dssp C---HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE-ECC
T ss_pred c---HHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC-CCh
Confidence 1 234556678899999999876410 0 11111 28899999999998 765
No 45
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.52 E-value=6.7e-15 Score=134.71 Aligned_cols=149 Identities=17% Similarity=0.237 Sum_probs=88.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCCccceeeeecCCCCC-----CcHHH------HHHHHHHHH-hc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERNDRVGGLLQYGIPTMK-----LSKEV------VQRRVKLLA-AE 179 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~~~gg~~~~~~~~~~-----~~~~~------~~~~~~~l~-~~ 179 (276)
+.|||+|++ |+.+|..|++. |++|+|||+++.++ +.+.++|.+. ...++ .....+.+. ..
T Consensus 6 VvIIGaG~a-----Gl~aA~~L~~~~~g~~Vtvie~~~~~~-~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (472)
T 3iwa_A 6 VVVIGAVAL-----GPKAACRFKRLDPEAHVTMIDQASRIS-YGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINK 79 (472)
T ss_dssp EEEECCSSH-----HHHHHHHHHHHCTTSEEEEECCC-------------------------------------------
T ss_pred EEEECCCHH-----HHHHHHHHHhhCcCCCEEEEECCCccc-ccccccchhhcCCCCchHHhccccchhccCHHHHhhhc
Confidence 334999999 99999999988 99999999999864 3222333211 11122 222233344 47
Q ss_pred CcEEEeeeeecc-c-------cc----hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCC
Q psy12810 180 GIEFKTNINVGK-D-------IA----AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENV 247 (276)
Q Consensus 180 gv~i~~~~~v~~-~-------~~----~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~ 247 (276)
++++++++.+.. + .. ++...+.||.||+|||+. |..|++||.+.+++++..+..+.........
T Consensus 80 gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~-p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~--- 155 (472)
T 3iwa_A 80 DVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSK-ANRPPVEGMDLAGVTPVTNLDEAEFVQHAIS--- 155 (472)
T ss_dssp -CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE-ECCCSCTTTTSBTEEECCSHHHHHHHHHHCC---
T ss_pred CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCC-cCCCCCCCCCCCCEEEeCCHHHHHHHHHHhh---
Confidence 999998887641 1 11 222367899999999998 9999999988778766544332222111100
Q ss_pred CCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 248 SPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 248 ~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
...+++++|||+|++|+|+|..+.+
T Consensus 156 ---~~~~~~vvViGgG~~g~e~A~~l~~ 180 (472)
T 3iwa_A 156 ---AGEVSKAVIVGGGFIGLEMAVSLAD 180 (472)
T ss_dssp ---TTSCSEEEEECCSHHHHHHHHHHHH
T ss_pred ---cCCCCEEEEECCCHHHHHHHHHHHH
Confidence 1357899999999999999988764
No 46
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.52 E-value=3.6e-15 Score=135.81 Aligned_cols=146 Identities=23% Similarity=0.326 Sum_probs=101.2
Q ss_pred hhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCCccceeeeecCCC----C-C--CcHHHHHHHHHHHHhcCcEEEe
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERNDRVGGLLQYGIPT----M-K--LSKEVVQRRVKLLAAEGIEFKT 185 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~~~gg~~~~~~~~----~-~--~~~~~~~~~~~~l~~~gv~i~~ 185 (276)
.|||+|++ |+.+|..|++. |.+|+|||+.+.++ ++..+++. . . ...++.....+.+.+.|++++.
T Consensus 4 vIIGgG~a-----Gl~aA~~l~~~~~g~~V~lie~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~ 77 (452)
T 2cdu_A 4 IVVGCTHA-----GTFAVKQTIADHPDADVTAYEMNDNIS-FLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQM 77 (452)
T ss_dssp EEECCSHH-----HHHHHHHHHHHCTTCEEEEEESSSCCC-BCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEE
T ss_pred EEECCCHH-----HHHHHHHHHhhCcCCcEEEEECCCCCC-cccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEe
Confidence 35999999 99999999998 99999999988654 22222110 0 0 1112222234456778999988
Q ss_pred eeeec-cc-------cc----hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCC
Q psy12810 186 NINVG-KD-------IA----AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAK 253 (276)
Q Consensus 186 ~~~v~-~~-------~~----~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~ 253 (276)
++.+. .+ .. ++..++.||.||+|||++ |+.|++||.+.+++++..++.+..+.... ...
T Consensus 78 ~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~-p~~p~i~g~~~~~v~~~~~~~~~~~~~~~--------~~~ 148 (452)
T 2cdu_A 78 RHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSK-PTVPPIPGIDSSRVYLCKNYNDAKKLFEE--------APK 148 (452)
T ss_dssp SEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEE-ECCCCCTTTTSTTEEECSSHHHHHHHHHH--------GGG
T ss_pred CCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCC-cCCCCCCCCCCCCEEEeCcHHHHHHHHHH--------hcc
Confidence 87654 11 11 113458899999999998 99999999887788876554433222211 146
Q ss_pred CCeEEEEcCChHHHHHHHHhhc
Q psy12810 254 DKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 254 ~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+++++|||+|++|+|+|..+.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~ 170 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSN 170 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHT
T ss_pred CCeEEEECcCHHHHHHHHHHHh
Confidence 8999999999999999998865
No 47
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.52 E-value=9e-15 Score=126.11 Aligned_cols=140 Identities=17% Similarity=0.263 Sum_probs=98.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee--cCCC-----CCCcHHHHHHHHHHHHhcCcEEEee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY--GIPT-----MKLSKEVVQRRVKLLAAEGIEFKTN 186 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~--~~~~-----~~~~~~~~~~~~~~l~~~gv~i~~~ 186 (276)
+.|||+||+ |+.+|..|++.|++|+|||+ ..||.|.. +++. +....++...+.+.+.+.+++++.+
T Consensus 4 vvIIG~G~a-----Gl~aA~~l~~~g~~v~li~~--~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 76 (310)
T 1fl2_A 4 VLIVGSGPA-----GAAAAIYSARKGIRTGLMGE--RFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDS 76 (310)
T ss_dssp EEEECCSHH-----HHHHHHHHHTTTCCEEEECS--STTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECS
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCcEEEEeC--CCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEcc
Confidence 345999999 99999999999999999975 35665542 1111 1123466777777788889999998
Q ss_pred eeec-cc----------cc-hhhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCCCC
Q psy12810 187 INVG-KD----------IA-AKELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSPIS 251 (276)
Q Consensus 187 ~~v~-~~----------~~-~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~~~ 251 (276)
+.+. .+ +. .+..++.||.||+|+|++ |+.+++||.+. .++++... ++. . .
T Consensus 77 ~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~-~~~~~~~g~~~~~~~~~~~~~~-~~~---~----------~ 141 (310)
T 1fl2_A 77 QSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK-WRNMNVPGEDQYRTKGVTYCPH-CDG---P----------L 141 (310)
T ss_dssp CCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE-ECCCCCTTTTTTBTTTEESCHH-HHG---G----------G
T ss_pred CEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC-cCCCCCCChhhcccceeEEecc-CcH---h----------h
Confidence 6553 11 11 112357899999999998 88888888652 33443221 111 1 2
Q ss_pred CCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 252 AKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 252 ~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
..+++++|||+|++|+|+|..+.+
T Consensus 142 ~~~~~v~VvG~G~~g~e~A~~l~~ 165 (310)
T 1fl2_A 142 FKGKRVAVIGGGNSGVEAAIDLAG 165 (310)
T ss_dssp GBTCEEEEECCSHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHH
Confidence 568999999999999999988765
No 48
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.52 E-value=5.2e-15 Score=133.26 Aligned_cols=148 Identities=20% Similarity=0.257 Sum_probs=100.7
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcE--EEEEcCCCccceeeeecCC-----CCCCcHHHHHHHHHHHHhcCcEEEe
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHS--VTVFERNDRVGGLLQYGIP-----TMKLSKEVVQRRVKLLAAEGIEFKT 185 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~--Vtvie~~~~~gg~~~~~~~-----~~~~~~~~~~~~~~~l~~~gv~i~~ 185 (276)
.+.|||+|++ |+.+|..|++.|++ |+|||+++..+ +.+..+. ......++.....+++.+.++++++
T Consensus 11 ~vvIIGaG~a-----Gl~aA~~L~~~g~~~~V~lie~~~~~~-y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 84 (415)
T 3lxd_A 11 DVVIVGAGHG-----GAQAAIALRQNGFEGRVLVIGREPEIP-YERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKL 84 (415)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCSCEEEEESSSSCC-BCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEE
T ss_pred cEEEECChHH-----HHHHHHHHHccCcCCCEEEEecCCCCC-cCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEe
Confidence 3445999999 99999999999988 99999988754 2111111 0011122222334567788999999
Q ss_pred eeeecc-c-----cc-hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCC-CCeE
Q psy12810 186 NINVGK-D-----IA-AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAK-DKNV 257 (276)
Q Consensus 186 ~~~v~~-~-----~~-~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~-~k~v 257 (276)
++.+.. + +. .+...+.||+||+|||+. |+.+++||.+.+++++..+..+....... ... ++++
T Consensus 85 ~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~-~~~~~i~g~~~~~v~~~~~~~d~~~l~~~--------~~~~~~~v 155 (415)
T 3lxd_A 85 GAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGD-PRRLSCVGADLAGVHAVRTKEDADRLMAE--------LDAGAKNA 155 (415)
T ss_dssp TCCEEEEETTTTEEEETTSCEEEEEEEEECCCEE-CCCCBTTSSCCBTEECCCSHHHHHHHHHH--------HHTTCCEE
T ss_pred CCEEEEEECCCCEEEECCCCEEEeeEEEEccCCc-cCCCCCCCccccCEEEEcCHHHHHHHHHH--------hhhcCCeE
Confidence 976641 1 11 122367899999999998 99999999887887754332221111100 134 8999
Q ss_pred EEEcCChHHHHHHHHhhc
Q psy12810 258 IVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 258 vVIGgG~~G~E~A~~~~r 275 (276)
+|||+|++|+|+|..+.+
T Consensus 156 vViGgG~~g~e~A~~l~~ 173 (415)
T 3lxd_A 156 VVIGGGYIGLEAAAVLTK 173 (415)
T ss_dssp EEECCSHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHh
Confidence 999999999999988764
No 49
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.51 E-value=6.9e-15 Score=128.50 Aligned_cols=142 Identities=22% Similarity=0.292 Sum_probs=100.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec-----CCCCC---CcHHHHHHHHHHHHhcCcEEE
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG-----IPTMK---LSKEVVQRRVKLLAAEGIEFK 184 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~-----~~~~~---~~~~~~~~~~~~l~~~gv~i~ 184 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+. .+||.|.+. .|.++ ...++..++.+.+.+.|++++
T Consensus 16 ~vvIIG~G~a-----Gl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~ 89 (335)
T 2a87_A 16 DVIVIGSGPA-----GYTAALYAARAQLAPLVFEGT-SFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLR 89 (335)
T ss_dssp EEEEECCHHH-----HHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEECCCHH-----HHHHHHHHHhCCCeEEEEecC-CCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 3445999999 999999999999999999975 566665431 22221 235677777777888899999
Q ss_pred eeeeecccc-------c-hhhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCCCCCC
Q psy12810 185 TNINVGKDI-------A-AKELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSPISAK 253 (276)
Q Consensus 185 ~~~~v~~~~-------~-~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~~~~~ 253 (276)
.++....+. . .+..++.||.||+|+|++ |+.+++||.+. .++..... .+. . ...
T Consensus 90 ~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~-~~~~~i~g~~~~~~~~~~~~~~-~~~---~----------~~~ 154 (335)
T 2a87_A 90 MEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAA-ARYLQVPGEQELLGRGVSSCAT-CDG---F----------FFR 154 (335)
T ss_dssp CCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEE-ECCCCCTHHHHTBTTTEESCHH-HHG---G----------GGT
T ss_pred EeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCC-ccCCCCCchHhccCCceEEeec-cch---h----------hcC
Confidence 886322211 1 122357899999999998 88888888642 33443221 221 1 146
Q ss_pred CCeEEEEcCChHHHHHHHHhhc
Q psy12810 254 DKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 254 ~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+++++|||+|++|+|+|..+.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~ 176 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTR 176 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH
Confidence 8999999999999999998765
No 50
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.50 E-value=8e-15 Score=129.29 Aligned_cols=143 Identities=21% Similarity=0.297 Sum_probs=100.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee--------cCCCCC--CcHHHHHHHHHHHHhcCcE
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY--------GIPTMK--LSKEVVQRRVKLLAAEGIE 182 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~--------~~~~~~--~~~~~~~~~~~~l~~~gv~ 182 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+.+.+||.|.. ..+.++ ...++...+.+.+.+.+++
T Consensus 16 dvvIIG~G~a-----Gl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 90 (360)
T 3ab1_A 16 DLTIIGGGPT-----GIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPD 90 (360)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCE
T ss_pred CEEEECCCHH-----HHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCE
Confidence 3445999999 999999999999999999999988876642 222221 2356777777888888999
Q ss_pred EEeeeeecc-c--------cc-hhhhhcccCEEEEcCCCC--CCCCCCCCC-cC-CC--CeeehHHHHHHHHHhhcCCCC
Q psy12810 183 FKTNINVGK-D--------IA-AKELYEEFDALLLCTGAT--WPRDLPIPG-RQ-LS--GIYFAMSFLESWQKKQMGNEN 246 (276)
Q Consensus 183 i~~~~~v~~-~--------~~-~~~~~~~~D~vVlAtG~~--~p~~~~i~g-~~-~~--gv~~~~~~l~~~~~~~~~~~~ 246 (276)
+++++.|+. + +. .+...+.||.||+|+|+. .|+.++++| .+ .. ++.+.. .. .
T Consensus 91 ~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~---~~---~------ 158 (360)
T 3ab1_A 91 VVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAV---KS---V------ 158 (360)
T ss_dssp EECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSC---SC---G------
T ss_pred EEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEec---CC---H------
Confidence 998876642 1 11 112357899999999984 266677777 43 22 233211 00 0
Q ss_pred CCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 247 VSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 247 ~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
....+++|+|||+|++|+|+|..+.+
T Consensus 159 ---~~~~~~~vvVvG~G~~g~e~A~~l~~ 184 (360)
T 3ab1_A 159 ---EDFKGKRVVIVGGGDSALDWTVGLIK 184 (360)
T ss_dssp ---GGGTTCEEEEECSSHHHHHHHHHTTT
T ss_pred ---HHcCCCcEEEECCCHHHHHHHHHHHh
Confidence 01468999999999999999998765
No 51
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.50 E-value=5.2e-15 Score=132.79 Aligned_cols=144 Identities=19% Similarity=0.227 Sum_probs=97.3
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCc--EEEEEcCCCccceeeeecCC-----CCCCcHHHHHHHHHHHHhcCcEEEeeee
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGH--SVTVFERNDRVGGLLQYGIP-----TMKLSKEVVQRRVKLLAAEGIEFKTNIN 188 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~--~Vtvie~~~~~gg~~~~~~~-----~~~~~~~~~~~~~~~l~~~gv~i~~~~~ 188 (276)
|||+|++ |+.+|..|++.|+ +|+|||+++... +.+..++ ......++.....+++.+.+++++. +.
T Consensus 6 IIGaG~a-----Gl~aA~~L~~~g~~~~V~lie~~~~~~-y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~ 78 (404)
T 3fg2_P 6 IAGAGHA-----GFQVAVSLRQAKYPGRIALINDEKHLP-YQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DR 78 (404)
T ss_dssp EECCSHH-----HHHHHHHHHHTTCCSCEEEECCSSSSS-BCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CC
T ss_pred EEcChHH-----HHHHHHHHHhhCcCCCEEEEeCCCCCC-CCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EE
Confidence 4999999 9999999999998 899999988653 1111110 0001111212234556778999998 55
Q ss_pred ec-cccc------hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEc
Q psy12810 189 VG-KDIA------AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIG 261 (276)
Q Consensus 189 v~-~~~~------~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIG 261 (276)
++ .+.. .+...+.||.||+|||+. |+.+++||.+.+++++..+..+....... ...+++++|||
T Consensus 79 v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~-p~~~~i~g~~~~~v~~~~~~~d~~~l~~~--------~~~~~~vvViG 149 (404)
T 3fg2_P 79 MVSIDREGRKLLLASGTAIEYGHLVLATGAR-NRMLDVPNASLPDVLYLRTLDESEVLRQR--------MPDKKHVVVIG 149 (404)
T ss_dssp EEEEETTTTEEEESSSCEEECSEEEECCCEE-ECCCCSTTTTSTTEECCSSHHHHHHHHHH--------GGGCSEEEEEC
T ss_pred EEEEECCCCEEEECCCCEEECCEEEEeeCCC-ccCCCCCCCCCCcEEEECCHHHHHHHHHH--------hhcCCeEEEEC
Confidence 53 1111 122367899999999998 99999999887888764432222111111 24689999999
Q ss_pred CChHHHHHHHHhhc
Q psy12810 262 GGDTGCDCIATSLR 275 (276)
Q Consensus 262 gG~~G~E~A~~~~r 275 (276)
+|++|+|+|..+.+
T Consensus 150 gG~~g~e~A~~l~~ 163 (404)
T 3fg2_P 150 AGFIGLEFAATARA 163 (404)
T ss_dssp CSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh
Confidence 99999999998764
No 52
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.50 E-value=1.2e-14 Score=132.53 Aligned_cols=142 Identities=20% Similarity=0.212 Sum_probs=98.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee------------------------cCC--CCCCc-H
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY------------------------GIP--TMKLS-K 166 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~------------------------~~~--~~~~~-~ 166 (276)
+.|||+||+ |+.+|..|++.|++|+|||+++.+||.|.. +++ ....+ .
T Consensus 4 vvIIG~G~a-----Gl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~ 78 (455)
T 2yqu_A 4 LLVIGAGPG-----GYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLP 78 (455)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHH
T ss_pred EEEECCChh-----HHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHH
Confidence 345999999 999999999999999999999878775421 110 00011 1
Q ss_pred HHH-----------HHHHHHHHhcCcEEEeeeeeccc-----cchhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeeh
Q psy12810 167 EVV-----------QRRVKLLAAEGIEFKTNINVGKD-----IAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFA 230 (276)
Q Consensus 167 ~~~-----------~~~~~~l~~~gv~i~~~~~v~~~-----~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~ 230 (276)
++. ..+.+.+++.|++++.++.+..+ +..+..++.||+||+|||++ |+.|+++|.+..++++.
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~-p~~~~~~g~~~~~v~~~ 157 (455)
T 2yqu_A 79 ALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSA-PLIPPWAQVDYERVVTS 157 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEE-ECCCTTBCCCSSSEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCC-CCCCCCCCCCcCcEech
Confidence 111 11234566779999988754321 11112458899999999998 88888888765567765
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 231 MSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 231 ~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
.+++. . ...+++++|||||++|+|+|..+.+
T Consensus 158 ~~~~~----~----------~~~~~~vvIiGgG~~g~e~A~~l~~ 188 (455)
T 2yqu_A 158 TEALS----F----------PEVPKRLIVVGGGVIGLELGVVWHR 188 (455)
T ss_dssp HHHTC----C----------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred HHhhc----c----------ccCCCeEEEECCCHHHHHHHHHHHH
Confidence 43321 0 1356899999999999999988765
No 53
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.49 E-value=9.3e-15 Score=126.52 Aligned_cols=141 Identities=18% Similarity=0.179 Sum_probs=100.0
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-----cCCCC---CCcHHHHHHHHHHHHhcCcEEEe
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-----GIPTM---KLSKEVVQRRVKLLAAEGIEFKT 185 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-----~~~~~---~~~~~~~~~~~~~l~~~gv~i~~ 185 (276)
+.|||+||+ |+.+|..|++.|++|++||+. .+||.+.+ ..|.+ ....++...+.+.+.+.++++++
T Consensus 8 vvIIG~G~a-----Gl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (320)
T 1trb_A 8 LLILGSGPA-----GYTAAVYAARANLQPVLITGM-EKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIF 81 (320)
T ss_dssp EEEECCSHH-----HHHHHHHHHTTTCCCEEECCS-STTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEEC
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCcEEEEccC-CCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 345999999 999999999999999999965 56665432 12222 12356777777788889999998
Q ss_pred eeeecccc-------chhhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCCCCCCCC
Q psy12810 186 NINVGKDI-------AAKELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSPISAKDK 255 (276)
Q Consensus 186 ~~~v~~~~-------~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k 255 (276)
++....+. ..+...+.||.||+|+|++ |+.+++||.+. .++.+... .+. . ...++
T Consensus 82 ~~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~-~~~~~~~g~~~~~~~~~~~~~~-~~~---~----------~~~~~ 146 (320)
T 1trb_A 82 DHINKVDLQNRPFRLNGDNGEYTCDALIIATGAS-ARYLGLPSEEAFKGRGVSACAT-SDG---F----------FYRNQ 146 (320)
T ss_dssp CCEEEEECSSSSEEEEESSCEEEEEEEEECCCEE-ECCCCCHHHHHTBTTTEESCHH-HHG---G----------GGTTS
T ss_pred eeeeEEEecCCEEEEEeCCCEEEcCEEEECCCCC-cCCCCCCChHHhCCceeEeccc-CCc---c----------ccCCC
Confidence 87332221 1122357899999999998 88888887542 34443221 221 1 15689
Q ss_pred eEEEEcCChHHHHHHHHhhc
Q psy12810 256 NVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 256 ~vvVIGgG~~G~E~A~~~~r 275 (276)
+++|||+|++|+|+|..+.+
T Consensus 147 ~v~ViG~G~~g~e~A~~l~~ 166 (320)
T 1trb_A 147 KVAVIGGGNTAVEEALYLSN 166 (320)
T ss_dssp EEEEECSSHHHHHHHHHHTT
T ss_pred eEEEECCCHHHHHHHHHHHh
Confidence 99999999999999998765
No 54
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.49 E-value=2.2e-14 Score=132.23 Aligned_cols=139 Identities=16% Similarity=0.179 Sum_probs=91.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-------------------------cCCC-CCCc-H
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-------------------------GIPT-MKLS-K 166 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-------------------------~~~~-~~~~-~ 166 (276)
+.|||+||+ |+.+|..|++.|++|+|||+++ +||.|.+ +++. ...+ +
T Consensus 5 VvIIGgG~a-----Gl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (500)
T 1onf_A 5 LIVIGGGSG-----GMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLP 78 (500)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHH
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHH
Confidence 445999999 9999999999999999999985 6665421 1110 0011 1
Q ss_pred H-----------HHHHHHHHHHhcCcEEEeeeeeccc-----cch------------hhhhcccCEEEEcCCCCCCCCCC
Q psy12810 167 E-----------VVQRRVKLLAAEGIEFKTNINVGKD-----IAA------------KELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 167 ~-----------~~~~~~~~l~~~gv~i~~~~~v~~~-----~~~------------~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
+ +...+.+.+++.|++++.++.+..+ ... ...++.||+||+|||++ |+.|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~-p~~p~ 157 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNK-PVFPP 157 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCC-BCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCC-CCCCC
Confidence 1 1112334456789999988654211 111 13468899999999998 99988
Q ss_pred CCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 219 IPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 219 i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
+||.+ .++++.+++. . ..+++++|||||++|+|+|..+.++
T Consensus 158 i~G~~--~~~~~~~~~~------------~---~~~~~vvViGgG~ig~E~A~~l~~~ 198 (500)
T 1onf_A 158 VKGIE--NTISSDEFFN------------I---KESKKIGIVGSGYIAVELINVIKRL 198 (500)
T ss_dssp CTTGG--GCEEHHHHTT------------C---CCCSEEEEECCSHHHHHHHHHHHTT
T ss_pred CCCCC--cccCHHHHhc------------c---CCCCeEEEECChHHHHHHHHHHHHc
Confidence 98864 2455433221 0 1288999999999999999988753
No 55
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.49 E-value=2e-14 Score=124.01 Aligned_cols=144 Identities=13% Similarity=0.173 Sum_probs=94.3
Q ss_pred cchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCC-----CCcHHHHHHHHHHHHhcC-cEEE
Q psy12810 111 DIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTM-----KLSKEVVQRRVKLLAAEG-IEFK 184 (276)
Q Consensus 111 ~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~-----~~~~~~~~~~~~~l~~~g-v~i~ 184 (276)
.+.+.|||+||+ |+++|.+|++.|++|+|||++.. ||.+....|.+ ..++++.....+.+.+.+ +.++
T Consensus 6 ~yDVvIIGaGpA-----GlsAA~~lar~g~~v~lie~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (304)
T 4fk1_A 6 YIDCAVIGAGPA-----GLNASLVLGRARKQIALFDNNTN-RNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYY 79 (304)
T ss_dssp CEEEEEECCSHH-----HHHHHHHHHHTTCCEEEEECSCC-GGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEE
T ss_pred CcCEEEECCCHH-----HHHHHHHHHHCCCCEEEEeCCCC-CCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEE
Confidence 345556999999 99999999999999999998764 44432222222 223556666666666654 5555
Q ss_pred eeeeeccc---------cchhhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCCCCC
Q psy12810 185 TNINVGKD---------IAAKELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSPISA 252 (276)
Q Consensus 185 ~~~~v~~~---------~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~~~~ 252 (276)
..+.+... ...+..++.||+||||||++ |+.|++||.+. .++++... .+.. ..
T Consensus 80 ~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~-p~~p~i~G~~~~~~~~v~~~~~-~~~~-------------~~ 144 (304)
T 4fk1_A 80 EKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQ-EEFPSIPNVREYYGKSLFSCPY-CDGW-------------EL 144 (304)
T ss_dssp ECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCE-EECCSCTTHHHHBTTTEESCHH-HHSG-------------GG
T ss_pred eeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCc-cccccccCccccccceeeeccc-cchh-------------Hh
Confidence 54443211 12233468899999999998 99999998652 45555322 1111 24
Q ss_pred CCCeEEEEcCChH-HHHHHHHhhc
Q psy12810 253 KDKNVIVIGGGDT-GCDCIATSLR 275 (276)
Q Consensus 253 ~~k~vvVIGgG~~-G~E~A~~~~r 275 (276)
.+++++|||||.. ++|+|..+.+
T Consensus 145 ~~~~~~VIggG~~~~~e~a~~~~~ 168 (304)
T 4fk1_A 145 KDQPLIIISENEDHTLHMTKLVYN 168 (304)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHTT
T ss_pred cCCceeeecCCCchhhhHHHHHHh
Confidence 6778888888876 5677766544
No 56
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.49 E-value=3.1e-15 Score=140.53 Aligned_cols=149 Identities=19% Similarity=0.295 Sum_probs=101.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCCccceeeeecCCCC-----CCcHH-HHHHHHHHHHhcCcEEEe
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERNDRVGGLLQYGIPTM-----KLSKE-VVQRRVKLLAAEGIEFKT 185 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~~~gg~~~~~~~~~-----~~~~~-~~~~~~~~l~~~gv~i~~ 185 (276)
+.|||+|++ |+++|..|++. |.+|+|||+++.++ +.+.++|.+ ....+ +...+....++.++++++
T Consensus 39 VvIIGgG~A-----Gl~aA~~L~~~~~g~~V~vie~~~~~~-~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~ 112 (588)
T 3ics_A 39 IVVVGGVAG-----GASVAARLRRLSEEDEIIMVERGEYIS-FANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRV 112 (588)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHCSSSEEEEECSSSCSS-BCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEEC
T ss_pred EEEECCcHH-----HHHHHHHHHhhCcCCCEEEEECCCCcc-ccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEE
Confidence 445999999 99999999988 89999999999764 332222110 01111 222334445678999999
Q ss_pred eeeecc-c-------c----chhhhhcccCEEEEcCCCCCCCCCCCCCc-CCCCeeehHHHHHHHHHhhcCCCCCCCCCC
Q psy12810 186 NINVGK-D-------I----AAKELYEEFDALLLCTGATWPRDLPIPGR-QLSGIYFAMSFLESWQKKQMGNENVSPISA 252 (276)
Q Consensus 186 ~~~v~~-~-------~----~~~~~~~~~D~vVlAtG~~~p~~~~i~g~-~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~ 252 (276)
++.++. + . .++...+.||.||+|||++ |+.|++||. +.+++++..++.+......... ..
T Consensus 113 ~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~-p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~------~~ 185 (588)
T 3ics_A 113 LSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAK-PIVPSIPGIEEAKALFTLRNVPDTDRIKAYID------EK 185 (588)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE-ECCCCCTTTTTCTTEEECSSHHHHHHHHHHHH------HH
T ss_pred CCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCC-CCCCCCCCcccCCCeEEeCCHHHHHHHHHHHh------hc
Confidence 887751 1 1 1222367899999999998 999999998 6677777655433322110000 14
Q ss_pred CCCeEEEEcCChHHHHHHHHhhc
Q psy12810 253 KDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 253 ~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
.+++++|||+|++|+|+|..+.+
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~ 208 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRE 208 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHh
Confidence 68999999999999999998765
No 57
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.49 E-value=2.3e-14 Score=131.27 Aligned_cols=144 Identities=16% Similarity=0.211 Sum_probs=96.1
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc------cceeeee--------------------------cC
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR------VGGLLQY--------------------------GI 159 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~------~gg~~~~--------------------------~~ 159 (276)
+.+.|||+||+ |+.+|..|++.|++|+|||+.+. +||.|.+ ++
T Consensus 4 ~DVvVIGgG~a-----Gl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~ 78 (476)
T 3lad_A 4 FDVIVIGAGPG-----GYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGI 78 (476)
T ss_dssp CSEEEECCSHH-----HHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTE
T ss_pred CCEEEECcCHH-----HHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 34445999999 99999999999999999999873 3433210 00
Q ss_pred C--CCCCc-HH-----------HHHHHHHHHHhcCcEEEeeeeeccc-----c---chhhhhcccCEEEEcCCCCCCCCC
Q psy12810 160 P--TMKLS-KE-----------VVQRRVKLLAAEGIEFKTNINVGKD-----I---AAKELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 160 ~--~~~~~-~~-----------~~~~~~~~l~~~gv~i~~~~~v~~~-----~---~~~~~~~~~D~vVlAtG~~~p~~~ 217 (276)
+ ....+ .. +.......+++.+++++.++....+ + ++....+.||+||+|||++ |..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~-p~~~ 157 (476)
T 3lad_A 79 STGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSK-PVEI 157 (476)
T ss_dssp ECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEE-ECCC
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCC-CCCC
Confidence 0 00001 11 1111224456679999988754321 1 1122468899999999998 8777
Q ss_pred CCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 218 PIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 218 ~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+.++.+...++++.+++.. ...+++++|||+|++|+|+|..+.+
T Consensus 158 ~~~~~~~~~v~~~~~~~~~--------------~~~~~~v~ViGgG~~g~e~A~~l~~ 201 (476)
T 3lad_A 158 PPAPVDQDVIVDSTGALDF--------------QNVPGKLGVIGAGVIGLELGSVWAR 201 (476)
T ss_dssp TTSCCCSSSEEEHHHHTSC--------------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCCCcccEEechhhhcc--------------ccCCCeEEEECCCHHHHHHHHHHHH
Confidence 6666666667775443221 1467899999999999999998765
No 58
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.49 E-value=1.8e-14 Score=137.43 Aligned_cols=164 Identities=19% Similarity=0.319 Sum_probs=106.8
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeec--CCCCCCCHHHHHHHHHHHHhCCCeEEeccccCc------cchh
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYG--IPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK------DIAA 114 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~--~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~------~v~v 114 (276)
+||||+||.. |+++|++|+|||+++.+||++.+. +|......+...++..++++.||++++++.+.. +..+
T Consensus 382 G~AGl~aA~~-l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~~~~~~d~lv 460 (671)
T 1ps9_A 382 GPAGLAFAIN-AAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTADQLQAFDETI 460 (671)
T ss_dssp SHHHHHHHHH-HHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCSSSSCCSSEEE
T ss_pred CHHHHHHHHH-HHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecHHHhhcCCEEE
Confidence 6999999999 899999999999999999998754 455544466677788888999999999876532 1112
Q ss_pred hhccCCCCCC--------------------------------CCCCCCcchhhhhCCcEEE-------------------
Q psy12810 115 KVTNHTPQSD--------------------------------NQTKHCPPLIVNIVGHSVT------------------- 143 (276)
Q Consensus 115 ~iiG~gp~~~--------------------------------g~~Gl~~A~~l~~~G~~Vt------------------- 143 (276)
..+|+.|..+ |.+|+++|..|++.|.+|+
T Consensus 461 iAtG~~p~~~~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~ 540 (671)
T 1ps9_A 461 LASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQA 540 (671)
T ss_dssp ECCCEEECCCCCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSG
T ss_pred EccCCCcCCCCCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccccc
Confidence 2345433222 3446666666666654332
Q ss_pred ------------------EEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc------cc--chhh
Q psy12810 144 ------------------VFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK------DI--AAKE 197 (276)
Q Consensus 144 ------------------vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~------~~--~~~~ 197 (276)
++++.+.. +. ..+++.......+.+++.||++++++.+.. .. +++.
T Consensus 541 ~~~~~~~~~~~~~~~~v~l~~~~~~~-------l~-~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~ 612 (671)
T 1ps9_A 541 GGLSPQGMQIPRSPRQIVMLQRKASK-------PG-QGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGET 612 (671)
T ss_dssp GGBCTTCCCCCCCSSEEEEECSSCSC-------TT-TTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEE
T ss_pred ccccccccccCCCCcEEEEEEecchh-------hc-cccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeE
Confidence 22222210 00 012222333456678889999999987641 01 2222
Q ss_pred hhcccCEEEEcCCCCCCCC
Q psy12810 198 LYEEFDALLLCTGATWPRD 216 (276)
Q Consensus 198 ~~~~~D~vVlAtG~~~p~~ 216 (276)
.++++|.||+|+|.. |+.
T Consensus 613 ~~i~~D~Vi~a~G~~-p~~ 630 (671)
T 1ps9_A 613 QVLAVDNVVICAGQE-PNR 630 (671)
T ss_dssp EEECCSEEEECCCEE-ECC
T ss_pred EEEeCCEEEECCCcc-ccH
Confidence 468999999999998 764
No 59
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.49 E-value=2.5e-14 Score=123.98 Aligned_cols=142 Identities=16% Similarity=0.196 Sum_probs=98.4
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec-----CCCC--CCcHHHHHHHHHHHHhcCcEEEe
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG-----IPTM--KLSKEVVQRRVKLLAAEGIEFKT 185 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~-----~~~~--~~~~~~~~~~~~~l~~~gv~i~~ 185 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+. .+||.+.+. .|.+ ....++...+.+.+.+.|++++.
T Consensus 18 dvvIIG~G~a-----Gl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 91 (319)
T 3cty_A 18 DVVIVGAGAA-----GFSAAVYAARSGFSVAILDKA-VAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG 91 (319)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEEESS-STTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET
T ss_pred cEEEECcCHH-----HHHHHHHHHhCCCcEEEEeCC-CCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE
Confidence 3445999999 999999999999999999994 566655321 1221 12356667777778888999887
Q ss_pred eeeeccc-------cchhhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCCCCCCCC
Q psy12810 186 NINVGKD-------IAAKELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSPISAKDK 255 (276)
Q Consensus 186 ~~~v~~~-------~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k 255 (276)
......+ +..+..++.||.||+|+|++ |+.+++||.+. .++..... .+. . ...++
T Consensus 92 ~~v~~i~~~~~~~~v~~~~~~~~~~~li~AtG~~-~~~~~i~g~~~~~~~~~~~~~~-~~~---~----------~~~~~ 156 (319)
T 3cty_A 92 VEVRSIKKTQGGFDIETNDDTYHAKYVIITTGTT-HKHLGVKGESEYFGKGTSYCST-CDG---Y----------LFKGK 156 (319)
T ss_dssp CCEEEEEEETTEEEEEESSSEEEEEEEEECCCEE-ECCCCCBTTTTTBTTTEESCHH-HHG---G----------GGBTS
T ss_pred eeEEEEEEeCCEEEEEECCCEEEeCEEEECCCCC-cccCCCCChHHhCCceEEEEEe-cch---h----------hcCCC
Confidence 4322111 11122357899999999998 88888887653 34443221 211 1 14679
Q ss_pred eEEEEcCChHHHHHHHHhhc
Q psy12810 256 NVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 256 ~vvVIGgG~~G~E~A~~~~r 275 (276)
+++|||+|++|+|+|..+.+
T Consensus 157 ~v~viG~G~~g~e~a~~l~~ 176 (319)
T 3cty_A 157 RVVTIGGGNSGAIAAISMSE 176 (319)
T ss_dssp EEEEECCSHHHHHHHHHHTT
T ss_pred eEEEECCCHHHHHHHHHHHh
Confidence 99999999999999988764
No 60
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.49 E-value=6.8e-15 Score=134.53 Aligned_cols=143 Identities=15% Similarity=0.204 Sum_probs=99.1
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee--------------------------cCCC--CCC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY--------------------------GIPT--MKL 164 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~--------------------------~~~~--~~~ 164 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+.+.+||.|.. +++. ...
T Consensus 8 dvvIIGaG~a-----Gl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 82 (470)
T 1dxl_A 8 DVVIIGGGPG-----GYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEI 82 (470)
T ss_dssp CEEEECCSHH-----HHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEE
T ss_pred CEEEECCCHH-----HHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCcc
Confidence 4445999999 999999999999999999999888775421 1100 000
Q ss_pred c-HH-----------HHHHHHHHHHhcCcEEEeeeeeccc-----cc---hhhhhcccCEEEEcCCCCCCCCCCCCCcCC
Q psy12810 165 S-KE-----------VVQRRVKLLAAEGIEFKTNINVGKD-----IA---AKELYEEFDALLLCTGATWPRDLPIPGRQL 224 (276)
Q Consensus 165 ~-~~-----------~~~~~~~~l~~~gv~i~~~~~v~~~-----~~---~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~ 224 (276)
+ .. +...+.+.+++.+++++.++.+..+ +. ++...+.||.||+|||++ |..|+++|.+.
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~-p~~p~~~g~~~ 161 (470)
T 1dxl_A 83 DLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSD-VKSLPGVTIDE 161 (470)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEE-ECCBTTBCCCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCC-CCCCCCCCCCc
Confidence 1 11 1111234566779999998754311 11 111468899999999998 88888888766
Q ss_pred CCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 225 SGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 225 ~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+++++..+++. . ...+++++|||||++|+|+|..+.+
T Consensus 162 ~~v~~~~~~~~----~----------~~~~~~vvViGgG~~g~e~A~~l~~ 198 (470)
T 1dxl_A 162 KKIVSSTGALA----L----------SEIPKKLVVIGAGYIGLEMGSVWGR 198 (470)
T ss_dssp SSEECHHHHTT----C----------SSCCSEEEESCCSHHHHHHHHHHHH
T ss_pred ccEEeHHHhhh----h----------hhcCCeEEEECCCHHHHHHHHHHHH
Confidence 66776544321 1 1357999999999999999988764
No 61
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.48 E-value=2.3e-14 Score=127.72 Aligned_cols=146 Identities=16% Similarity=0.176 Sum_probs=99.0
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCC--cEEEEEcCCCccceeee-----ecCCCCCCcHHHHH-HHHHHHHhcCcEEEe
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVG--HSVTVFERNDRVGGLLQ-----YGIPTMKLSKEVVQ-RRVKLLAAEGIEFKT 185 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G--~~Vtvie~~~~~gg~~~-----~~~~~~~~~~~~~~-~~~~~l~~~gv~i~~ 185 (276)
+.|||+|++ |+.+|..|++.| .+|+++|+++. ..+. ..++......++.. ...+.+++.+++++.
T Consensus 7 vvIIG~G~a-----Gl~aA~~l~~~g~~~~V~lie~~~g--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 79 (384)
T 2v3a_A 7 LVIIGTGLA-----GYNLAREWRKLDGETPLLMITADDG--RSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILT 79 (384)
T ss_dssp EEEECCSHH-----HHHHHHHHHTTCSSSCEEEECSSCC--CEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEEC
T ss_pred EEEECChHH-----HHHHHHHHHhhCCCCCEEEEECCCC--CccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEe
Confidence 345999999 999999999999 56999998762 1221 11111112223322 233445778999998
Q ss_pred eeeecc-c-----cchhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEE
Q psy12810 186 NINVGK-D-----IAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIV 259 (276)
Q Consensus 186 ~~~v~~-~-----~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvV 259 (276)
++.+.. + +......+.||.||+|||++ |+.|++||.+..++++..++.+....... ...+++++|
T Consensus 80 ~~~v~~i~~~~~~v~~~~~~~~~d~lviAtG~~-p~~p~i~g~~~~~v~~~~~~~~~~~~~~~--------~~~~~~v~V 150 (384)
T 2v3a_A 80 HTRVTGIDPGHQRIWIGEEEVRYRDLVLAWGAE-PIRVPVEGDAQDALYPINDLEDYARFRQA--------AAGKRRVLL 150 (384)
T ss_dssp SCCCCEEEGGGTEEEETTEEEECSEEEECCCEE-ECCCCCBSTTTTCEEECSSHHHHHHHHHH--------HTTCCEEEE
T ss_pred CCEEEEEECCCCEEEECCcEEECCEEEEeCCCC-cCCCCCCCcCcCCEEEECCHHHHHHHHHh--------hccCCeEEE
Confidence 876541 1 11112358899999999998 99999998876778876665443221111 145899999
Q ss_pred EcCChHHHHHHHHhhc
Q psy12810 260 IGGGDTGCDCIATSLR 275 (276)
Q Consensus 260 IGgG~~G~E~A~~~~r 275 (276)
||+|++|+|+|..+.+
T Consensus 151 iGgG~~g~e~A~~l~~ 166 (384)
T 2v3a_A 151 LGAGLIGCEFANDLSS 166 (384)
T ss_dssp ECCSHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHh
Confidence 9999999999998765
No 62
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.48 E-value=1.3e-14 Score=132.26 Aligned_cols=141 Identities=21% Similarity=0.281 Sum_probs=95.9
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-------------------------cCCC--CCCc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-------------------------GIPT--MKLS 165 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-------------------------~~~~--~~~~ 165 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+. .+||.+.. +++. ...+
T Consensus 5 dvvIIGgG~a-----Gl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 78 (455)
T 1ebd_A 5 ETLVVGAGPG-----GYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTID 78 (455)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEEC
T ss_pred CEEEECCCHH-----HHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 3445999999 999999999999999999998 56654311 1110 0011
Q ss_pred -HH-----------HHHHHHHHHHhcCcEEEeeeeeccc-----cc-hhh-hhcccCEEEEcCCCCCCCCCCCCCcCCCC
Q psy12810 166 -KE-----------VVQRRVKLLAAEGIEFKTNINVGKD-----IA-AKE-LYEEFDALLLCTGATWPRDLPIPGRQLSG 226 (276)
Q Consensus 166 -~~-----------~~~~~~~~l~~~gv~i~~~~~v~~~-----~~-~~~-~~~~~D~vVlAtG~~~p~~~~i~g~~~~g 226 (276)
.. +...+.+.+++.|++++.++.+..+ +. .+. .++.||+||+|||++ |..|+++|.+..
T Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~-p~~~~~~g~~~~- 156 (455)
T 1ebd_A 79 FAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSR-PIELPNFKFSNR- 156 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEE-ECCBTTBCCCSS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCC-CCCCCCCCccce-
Confidence 11 1122345566789999998864321 11 111 457899999999998 888888886543
Q ss_pred eeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 227 IYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 227 v~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+++..+++. . ...+++++|||+|++|+|+|..+.+
T Consensus 157 v~~~~~~~~----~----------~~~~~~vvViGgG~~g~e~A~~l~~ 191 (455)
T 1ebd_A 157 ILDSTGALN----L----------GEVPKSLVVIGGGYIGIELGTAYAN 191 (455)
T ss_dssp EECHHHHHT----C----------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred EecHHHHhc----c----------ccCCCeEEEECCCHHHHHHHHHHHH
Confidence 555433221 1 1357999999999999999998865
No 63
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.48 E-value=1e-14 Score=133.00 Aligned_cols=140 Identities=20% Similarity=0.289 Sum_probs=93.2
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeee----------------------------ecCCC--C
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQ----------------------------YGIPT--M 162 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~----------------------------~~~~~--~ 162 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+ +.+||.|. ++++. .
T Consensus 7 dvvIIG~G~a-----Gl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 80 (458)
T 1lvl_A 7 TLLIIGGGPG-----GYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASP 80 (458)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCC
T ss_pred CEEEECCCHH-----HHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCC
Confidence 3445999999 99999999999999999999 56766542 22221 0
Q ss_pred CCc-HHHHH-----------HHHHHHHhcCcEEEeeeeeccc---cchhhhhcccCEEEEcCCCCCCCCCC-CCCcCCCC
Q psy12810 163 KLS-KEVVQ-----------RRVKLLAAEGIEFKTNINVGKD---IAAKELYEEFDALLLCTGATWPRDLP-IPGRQLSG 226 (276)
Q Consensus 163 ~~~-~~~~~-----------~~~~~l~~~gv~i~~~~~v~~~---~~~~~~~~~~D~vVlAtG~~~p~~~~-i~g~~~~g 226 (276)
..+ +++.. ...+.+++.|++++.++.+..+ +..+...+.||+||+|||++ |+.|+ ++ .+. .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~~~~d~lviATGs~-p~~~~~~~-~~~-~ 157 (458)
T 1lvl_A 81 RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDGQRIQCEHLLLATGSS-SVELPMLP-LGG-P 157 (458)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETTEEEECSEEEECCCEE-ECCBTTBC-CBT-T
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEeeEEEEeCEEEEeCCCC-CCCCCCCC-ccC-c
Confidence 111 12211 1234567789999988764321 11112468899999999998 87665 54 222 4
Q ss_pred eeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 227 IYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 227 v~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+++..+++.. ...+++++|||||++|+|+|..+.+
T Consensus 158 v~~~~~~~~~--------------~~~~~~vvViGgG~~g~e~A~~l~~ 192 (458)
T 1lvl_A 158 VISSTEALAP--------------KALPQHLVVVGGGYIGLELGIAYRK 192 (458)
T ss_dssp EECHHHHTCC--------------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred EecHHHHhhh--------------hccCCeEEEECcCHHHHHHHHHHHH
Confidence 5554332210 1357899999999999999988764
No 64
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.47 E-value=9.5e-15 Score=134.03 Aligned_cols=149 Identities=21% Similarity=0.308 Sum_probs=97.5
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCCccceeeeecCCC-----CCCcHHHHHHHHHHH-HhcCcEEEe
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERNDRVGGLLQYGIPT-----MKLSKEVVQRRVKLL-AAEGIEFKT 185 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~~~gg~~~~~~~~-----~~~~~~~~~~~~~~l-~~~gv~i~~ 185 (276)
+.|||+|++ |+.+|..|++. |.+|+|||+.+..+ +.+.+++. .....++.....+.+ +..|+++++
T Consensus 39 vvIIG~G~a-----Gl~aA~~l~~~~~g~~V~lie~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~ 112 (480)
T 3cgb_A 39 YVIIGGDAA-----GMSAAMQIVRNDENANVVTLEKGEIYS-YAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKV 112 (480)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHCTTCEEEEECSSSCCS-BCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEES
T ss_pred EEEECCCHH-----HHHHHHHHHhhCcCCcEEEEECCCCCC-CCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEe
Confidence 445999999 99999999986 89999999988654 22211111 011122222223445 345999998
Q ss_pred eeeec-cc-------cc----hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCC
Q psy12810 186 NINVG-KD-------IA----AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAK 253 (276)
Q Consensus 186 ~~~v~-~~-------~~----~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~ 253 (276)
++.+. .+ .. ++..++.||.||+|||++ |+.|++||.+.+++++..++.+..+...... ...
T Consensus 113 ~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~-p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~------~~~ 185 (480)
T 3cgb_A 113 RHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVR-PVMPEWEGRDLQGVHLLKTIPDAERILKTLE------TNK 185 (480)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE-ECCCCCBTTTSBTEECCSSHHHHHHHHHHHH------SSC
T ss_pred CCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCc-ccCCCCCCccCCCEEEeCCHHHHHHHHHHhh------hcC
Confidence 77653 11 11 111258899999999998 9999999987778776433222211110000 026
Q ss_pred CCeEEEEcCChHHHHHHHHhhc
Q psy12810 254 DKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 254 ~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+++++|||+|++|+|+|..+.+
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~ 207 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVE 207 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHh
Confidence 8999999999999999998765
No 65
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.47 E-value=3.9e-14 Score=129.40 Aligned_cols=141 Identities=18% Similarity=0.166 Sum_probs=94.6
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-------------------------cCCC--CCC
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-------------------------GIPT--MKL 164 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-------------------------~~~~--~~~ 164 (276)
+.+.|||+||+ |+.+|..|++.|++|+|||+. .+||.|.+ +++. ...
T Consensus 5 ~dVvIIGgG~a-----Gl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~ 78 (463)
T 2r9z_A 5 FDLIAIGGGSG-----GLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTL 78 (463)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---C
T ss_pred CcEEEECCCHH-----HHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCc
Confidence 34445999999 999999999999999999998 56665421 1110 011
Q ss_pred c-HHHH-----------HHHHHHHHhcCcEEEeeeeeccc---cchhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeee
Q psy12810 165 S-KEVV-----------QRRVKLLAAEGIEFKTNINVGKD---IAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYF 229 (276)
Q Consensus 165 ~-~~~~-----------~~~~~~l~~~gv~i~~~~~v~~~---~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~ 229 (276)
+ ..+. ..+.+.+.+.|++++.++....+ +..+..++.||+||+|||++ |..|++||.+ .+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs~-p~~p~i~G~~--~~~~ 155 (463)
T 2r9z_A 79 DWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEVEGQRLSADHIVIATGGR-PIVPRLPGAE--LGIT 155 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCEE-ECCCSCTTGG--GSBC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEECCEEEEcCEEEECCCCC-CCCCCCCCcc--ceec
Confidence 1 1111 11233456779999988653211 11122357899999999998 9888898864 2445
Q ss_pred hHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 230 AMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+.+++.. ...+++++|||+|++|+|+|..+.+
T Consensus 156 ~~~~~~~--------------~~~~~~vvVvGgG~~g~e~A~~l~~ 187 (463)
T 2r9z_A 156 SDGFFAL--------------QQQPKRVAIIGAGYIGIELAGLLRS 187 (463)
T ss_dssp HHHHHHC--------------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHhhh--------------hccCCEEEEECCCHHHHHHHHHHHh
Confidence 4443321 1357899999999999999998765
No 66
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.47 E-value=7.6e-14 Score=127.26 Aligned_cols=165 Identities=19% Similarity=0.215 Sum_probs=110.0
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee----------------------------ecCCC--CCCC-HHHHHH-
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ----------------------------YGIPT--MKLS-KEVVQR- 90 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~----------------------------~~~~~--~~~~-~~~~~~- 90 (276)
+|||++||.. |+++|++|+|||+ +.+||+|. +|++. ...+ ..+..+
T Consensus 14 G~aGl~aA~~-l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 91 (458)
T 1lvl_A 14 GPGGYVAAIR-AGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLDIGQSVAWK 91 (458)
T ss_dssp SHHHHHHHHH-HHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCCHHHHHHHH
T ss_pred CHHHHHHHHH-HHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccCHHHHHHHH
Confidence 6999999999 8999999999999 67999984 23321 1111 222221
Q ss_pred ----------HHHHHHhCCCeEEecccc----------Cc----cchhhhccCCCCCC----------------------
Q psy12810 91 ----------RVKLLAAEGIEFKTNINV----------GK----DIAAKVTNHTPQSD---------------------- 124 (276)
Q Consensus 91 ----------~~~~l~~~gv~~~~~~~v----------~~----~v~v~iiG~gp~~~---------------------- 124 (276)
....+++.||+++.++.+ +. +..+..+|+.|..+
T Consensus 92 ~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~~~~d~lviATGs~p~~~~~~~~~~~v~~~~~~~~~~~~~ 171 (458)
T 1lvl_A 92 DGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDGQRIQCEHLLLATGSSSVELPMLPLGGPVISSTEALAPKALP 171 (458)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETTEEEECSEEEECCCEEECCBTTBCCBTTEECHHHHTCCSSCC
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEeeEEEEeCEEEEeCCCCCCCCCCCCccCcEecHHHHhhhhccC
Confidence 224567789988766421 00 00111123211100
Q ss_pred --------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc----
Q psy12810 125 --------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD---- 192 (276)
Q Consensus 125 --------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~---- 192 (276)
|++|+++|..|++.|.+|+++++.+.+. | ..++++...+.+.+++.||++++++.+..-
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------~--~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~ 242 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL-------P--TYDSELTAPVAESLKKLGIALHLGHSVEGYENGC 242 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------T--TSCHHHHHHHHHHHHHHTCEEETTCEEEEEETTE
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc-------c--ccCHHHHHHHHHHHHHCCCEEEECCEEEEEEeCC
Confidence 4459999999999999999999988752 1 346777778888889999999998766411
Q ss_pred --cc---hhhhhcccCEEEEcCCCCCCCCCCC
Q psy12810 193 --IA---AKELYEEFDALLLCTGATWPRDLPI 219 (276)
Q Consensus 193 --~~---~~~~~~~~D~vVlAtG~~~p~~~~i 219 (276)
.. ++..++++|.||+|+|.+ |+...+
T Consensus 243 v~v~~~~G~~~~i~~D~vv~a~G~~-p~~~~l 273 (458)
T 1lvl_A 243 LLANDGKGGQLRLEADRVLVAVGRR-PRTKGF 273 (458)
T ss_dssp EEEECSSSCCCEECCSCEEECCCEE-ECCSSS
T ss_pred EEEEECCCceEEEECCEEEECcCCC-cCCCCC
Confidence 11 212468999999999998 876543
No 67
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.47 E-value=2.5e-14 Score=130.14 Aligned_cols=140 Identities=17% Similarity=0.202 Sum_probs=94.1
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-c--------------------CCCC-------CC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-G--------------------IPTM-------KL 164 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-~--------------------~~~~-------~~ 164 (276)
.+.|||+||+ |+.+|..|++.|++|+|||++ .+||.|.. + .+.+ ..
T Consensus 6 dvvIIGgG~a-----Gl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~ 79 (450)
T 1ges_A 6 DYIAIGGGSG-----GIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKF 79 (450)
T ss_dssp EEEEECCSHH-----HHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEE
T ss_pred CEEEECCCHH-----HHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 3445999999 999999999999999999997 56665421 0 0000 00
Q ss_pred c-HHHH-----------HHHHHHHHhcCcEEEeeeeeccc---cchhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeee
Q psy12810 165 S-KEVV-----------QRRVKLLAAEGIEFKTNINVGKD---IAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYF 229 (276)
Q Consensus 165 ~-~~~~-----------~~~~~~l~~~gv~i~~~~~v~~~---~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~ 229 (276)
+ ..+. ..+...+.+.+++++.++....+ +..+...+.||+||+|||++ |..|++||.+ .+++
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs~-p~~p~i~g~~--~~~~ 156 (450)
T 1ges_A 80 NWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGR-PSHPDIPGVE--YGID 156 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEETTEEEEEEEEEECCCEE-ECCCCSTTGG--GSBC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEECCEEEEeCEEEECCCCC-CCCCCCCCcc--ceec
Confidence 1 1111 12223456779999988653211 11122357899999999998 9988898864 2445
Q ss_pred hHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 230 AMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+.+++.. ...+++++|||||++|+|+|..+.+
T Consensus 157 ~~~~~~~--------------~~~~~~vvViGgG~~g~e~A~~l~~ 188 (450)
T 1ges_A 157 SDGFFAL--------------PALPERVAVVGAGYIGVELGGVING 188 (450)
T ss_dssp HHHHHHC--------------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred HHHhhhh--------------hhcCCeEEEECCCHHHHHHHHHHHh
Confidence 4443321 1357899999999999999998765
No 68
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.47 E-value=1.2e-14 Score=130.63 Aligned_cols=141 Identities=23% Similarity=0.298 Sum_probs=95.8
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcE--EEEEcCCCccceeeeecCCCCCCcHHHHHH------HHHHHHhcCcEEEe
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHS--VTVFERNDRVGGLLQYGIPTMKLSKEVVQR------RVKLLAAEGIEFKT 185 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~--Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~------~~~~l~~~gv~i~~ 185 (276)
+.|||+|++ |+.+|..|++.|++ |+|||+.+.++ |..+ ..++.+... ..+++.+.|+++++
T Consensus 10 vvIIG~G~a-----Gl~aA~~l~~~g~~~~V~lie~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 78 (408)
T 2gqw_A 10 VVVLGAGLA-----SVSFVAELRQAGYQGLITVVGDEAERP----YDRP--PLSKDFMAHGDAEKIRLDCKRAPEVEWLL 78 (408)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHTCCSCEEEEESSCSCC----BCSG--GGGTHHHHHCCGGGSBCCCTTSCSCEEEE
T ss_pred EEEECChHH-----HHHHHHHHHccCCCCeEEEEECCCCCc----ccCC--CCCHHHhCCCchhhhhHHHHHHCCCEEEc
Confidence 445999999 99999999999985 99999988653 2111 112222111 00135567999999
Q ss_pred eeeec-ccc-----c-hhhhhcccCEEEEcCCCCCCCCCCC-CCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeE
Q psy12810 186 NINVG-KDI-----A-AKELYEEFDALLLCTGATWPRDLPI-PGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNV 257 (276)
Q Consensus 186 ~~~v~-~~~-----~-~~~~~~~~D~vVlAtG~~~p~~~~i-~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~v 257 (276)
++.+. .+. . .+..++.||+||+|||++ |+.|++ ||.+ +++++..+..+ ...+... ...++++
T Consensus 79 ~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~-~~~~~i~~G~~-~~v~~~~~~~~-~~~l~~~-------~~~~~~v 148 (408)
T 2gqw_A 79 GVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAA-PRALPTLQGAT-MPVHTLRTLED-ARRIQAG-------LRPQSRL 148 (408)
T ss_dssp TCCEEEEETTTTEEEETTSCEEECSEEEECCCEE-ECCCGGGTTCS-SCEEECCSHHH-HHHHHTT-------CCTTCEE
T ss_pred CCEEEEEECCCCEEEECCCCEEECCEEEECCCCC-CCCCCccCCCC-CcEEEECCHHH-HHHHHHH-------hhcCCeE
Confidence 87653 111 1 122357899999999998 999888 9987 77776443222 2222111 2458999
Q ss_pred EEEcCChHHHHHHHHhhc
Q psy12810 258 IVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 258 vVIGgG~~G~E~A~~~~r 275 (276)
+|||+|++|+|+|..+.+
T Consensus 149 vViGgG~~g~E~A~~l~~ 166 (408)
T 2gqw_A 149 LIVGGGVIGLELAATART 166 (408)
T ss_dssp EEECCSHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHh
Confidence 999999999999998865
No 69
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.46 E-value=2.5e-14 Score=130.45 Aligned_cols=148 Identities=15% Similarity=0.158 Sum_probs=96.8
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCC-----cEEEEEcCCCccceeeeecC--------------------CC------
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVG-----HSVTVFERNDRVGGLLQYGI--------------------PT------ 161 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G-----~~Vtvie~~~~~gg~~~~~~--------------------~~------ 161 (276)
.+.|||+||+ |+.+|..|++.| .+|+|||+.+.+| |..+. |.
T Consensus 32 dVvIIGaG~a-----Gl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~ 104 (463)
T 3s5w_A 32 DLIGVGFGPS-----NIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFV 104 (463)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHH
T ss_pred CEEEECCCHH-----HHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChh
Confidence 4555999999 999999999999 9999999999765 22110 00
Q ss_pred ------------------CCCcHHHHHHHHHHHHhcCcEEEeeeeecc-ccc---h----------hh----hhcccCEE
Q psy12810 162 ------------------MKLSKEVVQRRVKLLAAEGIEFKTNINVGK-DIA---A----------KE----LYEEFDAL 205 (276)
Q Consensus 162 ------------------~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~-~~~---~----------~~----~~~~~D~v 205 (276)
++...++..++.....+.+++++++++|+. +.. + +. .++.||.|
T Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~l 184 (463)
T 3s5w_A 105 NYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRAL 184 (463)
T ss_dssp HHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEE
T ss_pred HhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEE
Confidence 001133444444555566888888876641 111 0 11 16789999
Q ss_pred EEcCCCCCCCCCC-CCCcCCC-CeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 206 LLCTGATWPRDLP-IPGRQLS-GIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 206 VlAtG~~~p~~~~-i~g~~~~-gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
|+|||+. |..|+ +++.... .++++.++.+....+.. ....+++|+|||+|++|+|+|..+.+
T Consensus 185 VlAtG~~-p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~vvVvGgG~sg~e~a~~l~~ 248 (463)
T 3s5w_A 185 VVSPGGT-PRIPQVFRALKGDGRVFHHSQYLEHMAKQPC-------SSGKPMKIAIIGGGQSAAEAFIDLND 248 (463)
T ss_dssp EECCCCE-ECCCGGGGGGTTCTTEEEGGGHHHHHCC--------------CEEEEEECCSHHHHHHHHHHHH
T ss_pred EECCCCC-CCCcchhhhcCCCCcEEECHHHHhhHHHhhh-------cccCCCeEEEECCCHhHHHHHHHHHh
Confidence 9999997 87765 3333333 56777776665432110 01268999999999999999998764
No 70
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.46 E-value=1.3e-14 Score=131.44 Aligned_cols=147 Identities=17% Similarity=0.256 Sum_probs=96.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCc--EEEEEcCCCccceeeeecCCC-C----CCcHHHHHHHHHHHHhcCcEEEee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGH--SVTVFERNDRVGGLLQYGIPT-M----KLSKEVVQRRVKLLAAEGIEFKTN 186 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~--~Vtvie~~~~~gg~~~~~~~~-~----~~~~~~~~~~~~~l~~~gv~i~~~ 186 (276)
+.|||+|++ |+++|..|++.|+ +|+|||+.+.+. +.+..+.. + ....++.....+++.+.|++++++
T Consensus 7 vvIIGgG~a-----Gl~aA~~l~~~g~~~~V~lie~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~ 80 (431)
T 1q1r_A 7 VVIVGTGLA-----GVEVAFGLRASGWEGNIRLVGDATVIP-HHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGG 80 (431)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCSEEEEECSCCSCC-BCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECS
T ss_pred EEEEcCHHH-----HHHHHHHHHccCcCCCEEEEECCCCCC-CcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeC
Confidence 344999999 9999999999998 799999987643 11100000 0 001111111235567789999998
Q ss_pred eeec-cc-----cc-hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCC---eeehHHHHHHHHHhhcCCCCCCCCCCCCCe
Q psy12810 187 INVG-KD-----IA-AKELYEEFDALLLCTGATWPRDLPIPGRQLSG---IYFAMSFLESWQKKQMGNENVSPISAKDKN 256 (276)
Q Consensus 187 ~~v~-~~-----~~-~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~g---v~~~~~~l~~~~~~~~~~~~~~~~~~~~k~ 256 (276)
+.+. .+ +. .+..++.||.||+|||++ |+.+++||.+.++ +++..+. ++...+... ...+++
T Consensus 81 ~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~-p~~~~i~G~~~~~~~~v~~~~~~-~d~~~l~~~-------l~~~~~ 151 (431)
T 1q1r_A 81 TQVTAINRDRQQVILSDGRALDYDRLVLATGGR-PRPLPVASGAVGKANNFRYLRTL-EDAECIRRQ-------LIADNR 151 (431)
T ss_dssp CCEEEEETTTTEEEETTSCEEECSEEEECCCEE-ECCCGGGTTHHHHSTTEEESSSH-HHHHHHHHT-------CCTTCE
T ss_pred CEEEEEECCCCEEEECCCCEEECCEEEEcCCCC-ccCCCCCCcccCCCceEEEECCH-HHHHHHHHH-------hhcCCe
Confidence 7654 11 11 122357899999999998 9999998876555 6553332 222211110 246899
Q ss_pred EEEEcCChHHHHHHHHhhc
Q psy12810 257 VIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 257 vvVIGgG~~G~E~A~~~~r 275 (276)
++|||+|++|+|+|..+.+
T Consensus 152 vvViGgG~~g~E~A~~l~~ 170 (431)
T 1q1r_A 152 LVVIGGGYIGLEVAATAIK 170 (431)
T ss_dssp EEEECCSHHHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHh
Confidence 9999999999999998865
No 71
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.46 E-value=3.3e-14 Score=131.02 Aligned_cols=141 Identities=23% Similarity=0.277 Sum_probs=98.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhC---CcEEEEEcCCCccceeee-e------------------------cCCC----
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIV---GHSVTVFERNDRVGGLLQ-Y------------------------GIPT---- 161 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~---G~~Vtvie~~~~~gg~~~-~------------------------~~~~---- 161 (276)
+.|||+|++ |+.+|..|++. |++|+|||+.+ +||.+. + +++.
T Consensus 5 VvIIGgG~a-----Gl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~ 78 (499)
T 1xdi_A 5 IVILGGGPA-----GYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDD 78 (499)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC-----
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 345999999 99999999998 99999999988 666432 1 1110
Q ss_pred CCCc-HHH-----------HHHHHHHHHhcCcEEEeeeeecccc-----------c-hhh--hhcccCEEEEcCCCCCCC
Q psy12810 162 MKLS-KEV-----------VQRRVKLLAAEGIEFKTNINVGKDI-----------A-AKE--LYEEFDALLLCTGATWPR 215 (276)
Q Consensus 162 ~~~~-~~~-----------~~~~~~~l~~~gv~i~~~~~v~~~~-----------~-~~~--~~~~~D~vVlAtG~~~p~ 215 (276)
...+ ..+ ...+.+.+++.|++++.++....+. . .+. ..+.||.+|+|||+. |.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~-p~ 157 (499)
T 1xdi_A 79 AKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGAS-PR 157 (499)
T ss_dssp -CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEE-EC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCC-CC
Confidence 0011 111 1223456677899999887432221 0 011 257899999999998 98
Q ss_pred CCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 216 DLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 216 ~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
.|+++|.+..++++..++++. ...+++++|||+|++|+|+|..+.+
T Consensus 158 ~p~i~g~~~~~v~~~~~~~~~--------------~~~~~~vvViGgG~ig~E~A~~l~~ 203 (499)
T 1xdi_A 158 ILPSAQPDGERILTWRQLYDL--------------DALPDHLIVVGSGVTGAEFVDAYTE 203 (499)
T ss_dssp CCGGGCCCSSSEEEGGGGGGC--------------SSCCSSEEEESCSHHHHHHHHHHHH
T ss_pred CCCCCCCCcCcEEehhHhhhh--------------hccCCeEEEECCCHHHHHHHHHHHH
Confidence 888888877777775543321 1357899999999999999988764
No 72
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.46 E-value=2.4e-14 Score=132.63 Aligned_cols=144 Identities=15% Similarity=0.165 Sum_probs=94.7
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC--------ccceeeee-------------------------c
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND--------RVGGLLQY-------------------------G 158 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~--------~~gg~~~~-------------------------~ 158 (276)
+.+.|||+||+ |+.+|..|++.|++|+|||+.+ .+||.+.+ +
T Consensus 33 ~DVvVIGgGpa-----Gl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g 107 (519)
T 3qfa_A 33 YDLIIIGGGSG-----GLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYG 107 (519)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCHH-----HHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcC
Confidence 34455999999 9999999999999999999854 56764421 1
Q ss_pred CCC---CCCc-HHHHH-----------HHHHHHHhcCcEEEeeeeeccc-----c---chhhhhcccCEEEEcCCCCCCC
Q psy12810 159 IPT---MKLS-KEVVQ-----------RRVKLLAAEGIEFKTNINVGKD-----I---AAKELYEEFDALLLCTGATWPR 215 (276)
Q Consensus 159 ~~~---~~~~-~~~~~-----------~~~~~l~~~gv~i~~~~~v~~~-----~---~~~~~~~~~D~vVlAtG~~~p~ 215 (276)
++. ...+ ..+.. .....++..+|+++.+.....+ + +++..++.||+||+|||++ |+
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~-p~ 186 (519)
T 3qfa_A 108 WKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGER-PR 186 (519)
T ss_dssp BCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEE-EC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCC-cC
Confidence 110 0111 11111 1123456678998887643211 1 1223468999999999998 99
Q ss_pred CCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 216 DLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 216 ~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
.|++||.+.. ++++.++++ . ...+++++|||+|++|+|+|..+.++
T Consensus 187 ~p~i~G~~~~-~~t~~~~~~----l----------~~~~~~vvVIGgG~ig~E~A~~l~~~ 232 (519)
T 3qfa_A 187 YLGIPGDKEY-CISSDDLFS----L----------PYCPGKTLVVGASYVALECAGFLAGI 232 (519)
T ss_dssp CCCCTTHHHH-CBCHHHHTT----C----------SSCCCSEEEECCSHHHHHHHHHHHHT
T ss_pred CCCCCCccCc-eEcHHHHhh----h----------hhcCCeEEEECCcHHHHHHHHHHHHc
Confidence 9999885432 333322221 0 14567899999999999999988753
No 73
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.45 E-value=7.2e-14 Score=128.11 Aligned_cols=141 Identities=17% Similarity=0.145 Sum_probs=94.9
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-------------------------cCCC-----
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-------------------------GIPT----- 161 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-------------------------~~~~----- 161 (276)
+.+.|||+||+ |+.+|..|++.|++|+|||+. .+||.|.. ++..
T Consensus 12 ~dVvVIGgG~a-----Gl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 85 (479)
T 2hqm_A 12 YDYLVIGGGSG-----GVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLD 85 (479)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCS
T ss_pred CCEEEEcCCHH-----HHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccc
Confidence 34455999999 999999999999999999997 46665421 1110
Q ss_pred ---CCCc-HHHH-----------HHHHHHHHhcCcEEEeeeeeccc-----c---chhhhhcccCEEEEcCCCCCCCCC-
Q psy12810 162 ---MKLS-KEVV-----------QRRVKLLAAEGIEFKTNINVGKD-----I---AAKELYEEFDALLLCTGATWPRDL- 217 (276)
Q Consensus 162 ---~~~~-~~~~-----------~~~~~~l~~~gv~i~~~~~v~~~-----~---~~~~~~~~~D~vVlAtG~~~p~~~- 217 (276)
...+ ..+. ..+...+++.|++++.++....+ + +++..++.||.||+|||++ |+.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~-p~~p~ 164 (479)
T 2hqm_A 86 KEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGK-AIFPE 164 (479)
T ss_dssp GGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEE-ECCCT
T ss_pred cccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCC-CCCCC
Confidence 0111 1111 12234456789999988643211 1 1111257899999999998 8888
Q ss_pred CCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 218 PIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 218 ~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
++||.+. ++++.+++.. ...+++++|||||++|+|+|..+.+
T Consensus 165 ~i~g~~~--~~~~~~~~~l--------------~~~~~~vvViGgG~ig~E~A~~l~~ 206 (479)
T 2hqm_A 165 NIPGFEL--GTDSDGFFRL--------------EEQPKKVVVVGAGYIGIELAGVFHG 206 (479)
T ss_dssp TSTTGGG--SBCHHHHHHC--------------SSCCSEEEEECSSHHHHHHHHHHHH
T ss_pred CCCCccc--ccchHHHhcc--------------cccCCeEEEECCCHHHHHHHHHHHH
Confidence 8888642 3444443321 1467999999999999999998765
No 74
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.45 E-value=8e-14 Score=128.19 Aligned_cols=84 Identities=21% Similarity=0.249 Sum_probs=64.9
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc----------ccc
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK----------DIA 194 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~----------~~~ 194 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+.. ...
T Consensus 207 G~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------~--~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~ 277 (491)
T 3urh_A 207 GVIGLELGSVWARLGAKVTVVEFLDTIL-------G--GMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFE 277 (491)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECSSSSSS-------S--SSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEE
T ss_pred CHHHHHHHHHHHHcCCEEEEEecccccc-------c--cCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEE
Confidence 4458999999999999999999988752 1 35677888888889999999999987641 011
Q ss_pred ----hhhhhcccCEEEEcCCCCCCCCCC
Q psy12810 195 ----AKELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 195 ----~~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
++..++++|.||+|+|.. |+...
T Consensus 278 ~~~~g~~~~i~~D~Vi~a~G~~-p~~~~ 304 (491)
T 3urh_A 278 PVKGGEATTLDAEVVLIATGRK-PSTDG 304 (491)
T ss_dssp ETTSCCCEEEEESEEEECCCCE-ECCTT
T ss_pred ecCCCceEEEEcCEEEEeeCCc-cCCCc
Confidence 222468899999999998 77643
No 75
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.45 E-value=6.7e-15 Score=136.54 Aligned_cols=146 Identities=16% Similarity=0.132 Sum_probs=95.6
Q ss_pred cchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC--------cccee-eeec-----------------------
Q psy12810 111 DIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND--------RVGGL-LQYG----------------------- 158 (276)
Q Consensus 111 ~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~--------~~gg~-~~~~----------------------- 158 (276)
++.+.|||+||+ |+.+|..+++.|.+|+|||+.. .+||. +++|
T Consensus 42 dYDviVIG~Gpa-----G~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~ 116 (542)
T 4b1b_A 42 DYDYVVIGGGPG-----GMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKA 116 (542)
T ss_dssp SEEEEEECCSHH-----HHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred CCCEEEECCCHH-----HHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHh
Confidence 345556999999 9999999999999999999643 35552 1111
Q ss_pred --CC--CCCCc-HHHH-----------HHHHHHHHhcCcEEEeeeeecc-------c---cchhhhhcccCEEEEcCCCC
Q psy12810 159 --IP--TMKLS-KEVV-----------QRRVKLLAAEGIEFKTNINVGK-------D---IAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 159 --~~--~~~~~-~~~~-----------~~~~~~l~~~gv~i~~~~~v~~-------~---~~~~~~~~~~D~vVlAtG~~ 212 (276)
+. ....+ +.+. ......+++.||+++.+..... . ..+...++.+|++|||||++
T Consensus 117 ~Gi~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~ 196 (542)
T 4b1b_A 117 YGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCR 196 (542)
T ss_dssp GTEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEE
T ss_pred cCcccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCC
Confidence 10 00011 1111 1223446678998887764321 1 11234568899999999998
Q ss_pred CCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 213 WPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 213 ~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
|..|+.++.+...++++.+++.. ...+++++|||||++|+|+|..+.++
T Consensus 197 -P~~P~~~~~~~~~~~ts~~~l~l--------------~~lP~~lvIIGgG~IGlE~A~~~~~l 245 (542)
T 4b1b_A 197 -PHIPDDVEGAKELSITSDDIFSL--------------KKDPGKTLVVGASYVALECSGFLNSL 245 (542)
T ss_dssp -ECCCSSSBTHHHHCBCHHHHTTC--------------SSCCCSEEEECCSHHHHHHHHHHHHH
T ss_pred -CCCCCcccCCCccccCchhhhcc--------------ccCCceEEEECCCHHHHHHHHHHHhc
Confidence 98886555443444555444321 25689999999999999999988763
No 76
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.45 E-value=4.1e-14 Score=129.65 Aligned_cols=141 Identities=18% Similarity=0.280 Sum_probs=93.2
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee--------------------------cCCC---CC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY--------------------------GIPT---MK 163 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~--------------------------~~~~---~~ 163 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+.+.+||.|.. +++. ..
T Consensus 7 dVvIIGgG~a-----Gl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~ 81 (478)
T 1v59_A 7 DVVIIGGGPA-----GYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIK 81 (478)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEE
T ss_pred CEEEECCCHH-----HHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 3445999999 999999999999999999998877765421 1110 00
Q ss_pred Cc-HHHH-----------HHHHHHHHhcCcEEEeeeeeccc-----c---chhhhh------cccCEEEEcCCCCCCCCC
Q psy12810 164 LS-KEVV-----------QRRVKLLAAEGIEFKTNINVGKD-----I---AAKELY------EEFDALLLCTGATWPRDL 217 (276)
Q Consensus 164 ~~-~~~~-----------~~~~~~l~~~gv~i~~~~~v~~~-----~---~~~~~~------~~~D~vVlAtG~~~p~~~ 217 (276)
.+ .++. ..+.+.+++.|++++.++.+..+ + ++...+ +.||+||+|||++ |.
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~-p~-- 158 (478)
T 1v59_A 82 INVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSE-VT-- 158 (478)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEE-EC--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCC-CC--
Confidence 11 1111 11334566789999998765321 1 111235 8899999999998 63
Q ss_pred CCCCcCCC--CeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 218 PIPGRQLS--GIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 218 ~i~g~~~~--gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
.+||.+.. .++++.+++. . ...+++++|||||++|+|+|..+.+
T Consensus 159 ~~~g~~~~~~~v~~~~~~~~----~----------~~~~~~vvViGgG~~g~e~A~~l~~ 204 (478)
T 1v59_A 159 PFPGIEIDEEKIVSSTGALS----L----------KEIPKRLTIIGGGIIGLEMGSVYSR 204 (478)
T ss_dssp CCTTCCCCSSSEECHHHHTT----C----------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCCCCCCceEEcHHHHHh----h----------hccCceEEEECCCHHHHHHHHHHHH
Confidence 34555433 3555433221 1 1347999999999999999998865
No 77
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.45 E-value=3.3e-14 Score=129.88 Aligned_cols=140 Identities=22% Similarity=0.291 Sum_probs=93.2
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-------------------------cCCC-CCCc-H
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-------------------------GIPT-MKLS-K 166 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-------------------------~~~~-~~~~-~ 166 (276)
+.|||+||+ |+.+|..|++.|++|+|||+.+ +||.|.+ +++. ...+ .
T Consensus 9 vvIIG~G~a-----G~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 9 LIVIGTGPG-----GYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 445999999 9999999999999999999987 6665421 1110 0001 1
Q ss_pred HHHH-----------HHHHHHHhcCcEEEeeeeeccc---cchhhhhcccCEEEEcCCCCCCCCCC-CCCcCCCCeeehH
Q psy12810 167 EVVQ-----------RRVKLLAAEGIEFKTNINVGKD---IAAKELYEEFDALLLCTGATWPRDLP-IPGRQLSGIYFAM 231 (276)
Q Consensus 167 ~~~~-----------~~~~~l~~~gv~i~~~~~v~~~---~~~~~~~~~~D~vVlAtG~~~p~~~~-i~g~~~~gv~~~~ 231 (276)
.+.. .....+++.|++++.++.+..+ +.....++.||+||+|||++ |+.|+ +++ + ..++++.
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~g~~~~~d~lViATGs~-p~~p~gi~~-~-~~v~~~~ 159 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSE-PLELKGFPF-G-EDVWDST 159 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCEE-ECCBTTBCC-S-SSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEccEEEEeCEEEEcCCCC-CCCCCCCCC-C-CcEEcHH
Confidence 1111 1234566789999988764321 11112358899999999998 88775 665 2 2466544
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 232 SFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 232 ~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
++++. . ...+++++|||||++|+|+|..+.+
T Consensus 160 ~~~~l----~---------~~~~~~vvViGgG~~g~e~A~~l~~ 190 (464)
T 2eq6_A 160 RALKV----E---------EGLPKRLLVIGGGAVGLELGQVYRR 190 (464)
T ss_dssp HHTCG----G---------GCCCSEEEEECCSHHHHHHHHHHHH
T ss_pred HHHhh----h---------hhcCCEEEEECCCHHHHHHHHHHHH
Confidence 43221 0 1257899999999999999988765
No 78
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.45 E-value=5.5e-14 Score=128.81 Aligned_cols=141 Identities=16% Similarity=0.164 Sum_probs=94.2
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-------------------------cCCC--CCCc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-------------------------GIPT--MKLS 165 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-------------------------~~~~--~~~~ 165 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+. .+||.|.+ +++. ...+
T Consensus 22 dVvIIGgG~a-----Gl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (478)
T 3dk9_A 22 DYLVIGGGSG-----GLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFN 95 (478)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCC
T ss_pred CEEEECCCHH-----HHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccC
Confidence 3445999999 999999999999999999976 56654321 1111 0111
Q ss_pred -HH-----------HHHHHHHHHHhcCcEEEeeeeeccc-----cchhhhhcccCEEEEcCCCCCCCCC---CCCCcCCC
Q psy12810 166 -KE-----------VVQRRVKLLAAEGIEFKTNINVGKD-----IAAKELYEEFDALLLCTGATWPRDL---PIPGRQLS 225 (276)
Q Consensus 166 -~~-----------~~~~~~~~l~~~gv~i~~~~~v~~~-----~~~~~~~~~~D~vVlAtG~~~p~~~---~i~g~~~~ 225 (276)
.. +.......++..+++++.++....+ +..+..++.||+||+|||+. |+.| ++||.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~g~~~~~d~lviAtG~~-p~~p~~~~i~G~~-- 172 (478)
T 3dk9_A 96 WRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGM-PSTPHESQIPGAS-- 172 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEETTEEEECSCEEECCCEE-ECCCCTTTSTTGG--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEECCEEEEeeEEEEccCCC-CCCCCcCCCCCCc--
Confidence 11 1122334456679999888654321 12233458899999999998 8888 888865
Q ss_pred CeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 226 GIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 226 gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
.+.++.+++. . ...+++++|||+|++|+|+|..+.++
T Consensus 173 ~~~~~~~~~~----~----------~~~~~~vvViGgG~~g~E~A~~l~~~ 209 (478)
T 3dk9_A 173 LGITSDGFFQ----L----------EELPGRSVIVGAGYIAVEMAGILSAL 209 (478)
T ss_dssp GSBCHHHHTT----C----------CSCCSEEEEECCSHHHHHHHHHHHHT
T ss_pred eeEchHHhhc----h----------hhcCccEEEECCCHHHHHHHHHHHHc
Confidence 2233322221 0 14579999999999999999988653
No 79
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.44 E-value=3.2e-14 Score=130.75 Aligned_cols=144 Identities=15% Similarity=0.143 Sum_probs=94.8
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcC--------CCccceeee-------------------------ec
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFER--------NDRVGGLLQ-------------------------YG 158 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~--------~~~~gg~~~-------------------------~~ 158 (276)
+.+.|||+||+ |+.+|..|++.|.+|+|||+ ...+||.|. ++
T Consensus 7 ~DvvVIG~G~a-----Gl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g 81 (488)
T 3dgz_A 7 FDLLVIGGGSG-----GLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYG 81 (488)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCHH-----HHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcC
Confidence 34455999999 99999999999999999997 455777442 11
Q ss_pred CCC---CCCc-HHHHHH-----------HHHHHHhcCcEEEeeeeeccc-----c---chhhhhcccCEEEEcCCCCCCC
Q psy12810 159 IPT---MKLS-KEVVQR-----------RVKLLAAEGIEFKTNINVGKD-----I---AAKELYEEFDALLLCTGATWPR 215 (276)
Q Consensus 159 ~~~---~~~~-~~~~~~-----------~~~~l~~~gv~i~~~~~v~~~-----~---~~~~~~~~~D~vVlAtG~~~p~ 215 (276)
++. ...+ ..+..+ ....+.+.+|+++.+.....+ + +++..++.||+||+|||+. |+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~-p~ 160 (488)
T 3dgz_A 82 WEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGR-PR 160 (488)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEE-EC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCC-CC
Confidence 110 0111 111111 223456678998877543211 1 1222468999999999998 99
Q ss_pred CCC-CCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 216 DLP-IPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 216 ~~~-i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
.|+ +||.+... +++.+++. . ...+++++|||+|++|+|+|..+.++
T Consensus 161 ~p~~i~G~~~~~-~~~~~~~~----~----------~~~~~~vvViGgG~ig~E~A~~l~~~ 207 (488)
T 3dgz_A 161 YPTQVKGALEYG-ITSDDIFW----L----------KESPGKTLVVGASYVALECAGFLTGI 207 (488)
T ss_dssp CCSSCBTHHHHC-BCHHHHTT----C----------SSCCCSEEEECCSHHHHHHHHHHHHT
T ss_pred CCCCCCCccccc-CcHHHHHh----h----------hhcCCeEEEECCCHHHHHHHHHHHHc
Confidence 888 98864322 33322221 1 14578999999999999999988753
No 80
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.44 E-value=6e-14 Score=128.10 Aligned_cols=140 Identities=18% Similarity=0.192 Sum_probs=94.8
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-c-CCC-------------------C------CCc-
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-G-IPT-------------------M------KLS- 165 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-~-~~~-------------------~------~~~- 165 (276)
+.|||+||+ |+.+|..|++.|++|+|||+. .+||.+.. + +|. + ..+
T Consensus 6 vvIIGaG~a-----Gl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (464)
T 2a8x_A 6 VVVLGAGPG-----GYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDY 79 (464)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECH
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCH
Confidence 445999999 999999999999999999998 45554311 0 000 0 001
Q ss_pred HH-----------HHHHHHHHHHhcCcEEEeeeeeccc-----cc---hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCC
Q psy12810 166 KE-----------VVQRRVKLLAAEGIEFKTNINVGKD-----IA---AKELYEEFDALLLCTGATWPRDLPIPGRQLSG 226 (276)
Q Consensus 166 ~~-----------~~~~~~~~l~~~gv~i~~~~~v~~~-----~~---~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~g 226 (276)
.. +...+.+.+++.|++++.++.+..+ +. ++..++.||+||+|||++ |+.|+++|.+..
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~-~~~~~~~g~~~~- 157 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSS-TRLVPGTSLSAN- 157 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEE-ECCCTTCCCBTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCC-CCCCCCCCCCce-
Confidence 11 1112345566789999998865321 11 111468899999999998 888888886543
Q ss_pred eeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 227 IYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 227 v~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+++..+++. . ...+++++|||||++|+|+|..+.+
T Consensus 158 ~~~~~~~~~----~----------~~~~~~vvViGgG~~g~E~A~~l~~ 192 (464)
T 2a8x_A 158 VVTYEEQIL----S----------RELPKSIIIAGAGAIGMEFGYVLKN 192 (464)
T ss_dssp EECHHHHHT----C----------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred EEecHHHhh----c----------cccCCeEEEECCcHHHHHHHHHHHH
Confidence 555433221 1 1357899999999999999998765
No 81
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.44 E-value=5e-14 Score=129.55 Aligned_cols=140 Identities=21% Similarity=0.241 Sum_probs=92.3
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee--------------------------cCCC--CCCc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY--------------------------GIPT--MKLS 165 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~--------------------------~~~~--~~~~ 165 (276)
+.|||+||+ |+.+|..|++.|++|+|||+.+.+||.|.+ +++. ...+
T Consensus 28 VvVIGgG~a-----Gl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 102 (491)
T 3urh_A 28 LIVIGSGPG-----GYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLN 102 (491)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEEC
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccC
Confidence 445999999 999999999999999999998888885421 1100 0000
Q ss_pred -HH-----------HHHHHHHHHHhcCcEEEeeeeeccc-----c---chhhhhcccCEEEEcCCCCCCCCCCCCCcC--
Q psy12810 166 -KE-----------VVQRRVKLLAAEGIEFKTNINVGKD-----I---AAKELYEEFDALLLCTGATWPRDLPIPGRQ-- 223 (276)
Q Consensus 166 -~~-----------~~~~~~~~l~~~gv~i~~~~~v~~~-----~---~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~-- 223 (276)
.. +.......+++.+++++.++....+ + +++..++.||+||+|||+. |. ++||.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~-p~--~ipg~~~~ 179 (491)
T 3urh_A 103 LQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSD-VA--GIPGVEVA 179 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEE-CC--CBTTBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCC-CC--CCCCcccc
Confidence 11 1112234456779999888754321 1 1222468899999999987 53 455654
Q ss_pred C--CCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 224 L--SGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 224 ~--~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
. ..++++.+++. . ...+++++|||||++|+|+|..+.+
T Consensus 180 ~~~~~~~~~~~~~~----~----------~~~~~~vvViGgG~~g~E~A~~l~~ 219 (491)
T 3urh_A 180 FDEKTIVSSTGALA----L----------EKVPASMIVVGGGVIGLELGSVWAR 219 (491)
T ss_dssp CCSSSEECHHHHTS----C----------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred cCCeeEEehhHhhh----h----------hhcCCeEEEECCCHHHHHHHHHHHH
Confidence 2 33444322211 0 2568999999999999999988764
No 82
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.44 E-value=1.1e-13 Score=128.29 Aligned_cols=163 Identities=18% Similarity=0.149 Sum_probs=106.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeec-C-------------------------CCCCC----CHHHHHHHH
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYG-I-------------------------PTMKL----SKEVVQRRV 92 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~-~-------------------------~~~~~----~~~~~~~~~ 92 (276)
+|||++||+. |+++|++|+|+|+++.+||+|.+. + +.... ...+.....
T Consensus 52 G~aGl~aA~~-l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~ 130 (523)
T 1mo9_A 52 GAAGRFGSAY-LRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVGIKEVVDLFR 130 (523)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCCHHHHHHHHH
T ss_pred CHHHHHHHHH-HHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhhHHHHHHHHH
Confidence 5999999999 899999999999988899998532 1 11111 122332222
Q ss_pred -------HHH-----HhCCCeEEeccccC----ccc-----------hhhhccCCCCCC---------------------
Q psy12810 93 -------KLL-----AAEGIEFKTNINVG----KDI-----------AAKVTNHTPQSD--------------------- 124 (276)
Q Consensus 93 -------~~l-----~~~gv~~~~~~~v~----~~v-----------~v~iiG~gp~~~--------------------- 124 (276)
..+ ++.|+++.++..+. ..+ .+..+|+.|..+
T Consensus 131 ~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~g~~~~~d~lViATGs~p~~p~i~G~~~~~v~~~~~~~~~l~ 210 (523)
T 1mo9_A 131 AGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILAVGAGPGTLDVPGVNAKGVFDHATLVEELD 210 (523)
T ss_dssp HHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEETTEEEEBSCEEECCCEECCCCCSTTTTSBTEEEHHHHHHHCC
T ss_pred hhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEECCEEEEeCEEEECCCCCCCCCCCCCcccCcEeeHHHHHHHHH
Confidence 445 67788887222110 000 000112211110
Q ss_pred ------------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc
Q psy12810 125 ------------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD 192 (276)
Q Consensus 125 ------------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~ 192 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+..-
T Consensus 211 ~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------~--~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i 281 (523)
T 1mo9_A 211 YEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------L--IKDNETRAYVLDRMKEQGMEIISGSNVTRI 281 (523)
T ss_dssp SCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------T--CCSHHHHHHHHHHHHHTTCEEESSCEEEEE
T ss_pred hcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-------c--cccHHHHHHHHHHHHhCCcEEEECCEEEEE
Confidence 3348888889999999999999988642 1 256778888888899999999999876411
Q ss_pred ------------cc-hhhh-hcccCEEEEcCCCCCCCC
Q psy12810 193 ------------IA-AKEL-YEEFDALLLCTGATWPRD 216 (276)
Q Consensus 193 ------------~~-~~~~-~~~~D~vVlAtG~~~p~~ 216 (276)
+. .+.. ++++|.||+|+|.+ |+.
T Consensus 282 ~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~-p~~ 318 (523)
T 1mo9_A 282 EEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ-PRS 318 (523)
T ss_dssp EECTTSBEEEEEEEETTEEEEEECSCEEECCCCE-ECC
T ss_pred EEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc-cCC
Confidence 01 1112 68899999999998 775
No 83
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.43 E-value=6.3e-14 Score=129.80 Aligned_cols=140 Identities=17% Similarity=0.264 Sum_probs=99.2
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee--cCCC-----CCCcHHHHHHHHHHHHhcCcEEEee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY--GIPT-----MKLSKEVVQRRVKLLAAEGIEFKTN 186 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~--~~~~-----~~~~~~~~~~~~~~l~~~gv~i~~~ 186 (276)
+.|||+||+ |+++|..|++.|++|+++|+ .+||.+.. +++. +....++...+.+.+.+.|++++.+
T Consensus 215 VvIIGgG~A-----Gl~aA~~la~~G~~v~lie~--~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~ 287 (521)
T 1hyu_A 215 VLIVGSGPA-----GAAAAVYSARKGIRTGLMGE--RFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDS 287 (521)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEECS--STTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECS
T ss_pred EEEECCcHH-----HHHHHHHHHhCCCeEEEEEC--CCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcC
Confidence 446999999 99999999999999999986 45665542 1211 1234567777778888899999999
Q ss_pred eeec-cc----------cc-hhhhhcccCEEEEcCCCCCCCCCCCCCcCC---CCeeehHHHHHHHHHhhcCCCCCCCCC
Q psy12810 187 INVG-KD----------IA-AKELYEEFDALLLCTGATWPRDLPIPGRQL---SGIYFAMSFLESWQKKQMGNENVSPIS 251 (276)
Q Consensus 187 ~~v~-~~----------~~-~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~---~gv~~~~~~l~~~~~~~~~~~~~~~~~ 251 (276)
+.+. .+ +. .+...+.||+||+|||++ |+.+++||.+. .++++... .+. ..
T Consensus 288 ~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~-~~~~~ipG~~~~~~~~v~~~~~-~~~-------------~~ 352 (521)
T 1hyu_A 288 QSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK-WRNMNVPGEDQYRTKGVTYCPH-CDG-------------PL 352 (521)
T ss_dssp CCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE-ECCCCCTTTTTTTTTTEECCTT-CCG-------------GG
T ss_pred CEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC-cCCCCCCChhhhcCceEEEeec-Cch-------------hh
Confidence 6653 11 11 122357899999999998 88888888652 33433211 100 12
Q ss_pred CCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 252 AKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 252 ~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+.+++|+|||+|++|+|+|..+.+
T Consensus 353 ~~~k~V~ViGgG~~g~E~A~~L~~ 376 (521)
T 1hyu_A 353 FKGKRVAVIGGGNSGVEAAIDLAG 376 (521)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHh
Confidence 568999999999999999988754
No 84
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.43 E-value=1.3e-13 Score=125.57 Aligned_cols=167 Identities=19% Similarity=0.134 Sum_probs=107.3
Q ss_pred ccchhchHHHHHhhC--CCeEEEeccCCCCC----ceeeecCCCCCCCHHHHHHHHHHHHhCCCeEEeccccC------c
Q psy12810 43 FTATLSYHISIQHLV--GHSVTVFERNDRVG----GLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVG------K 110 (276)
Q Consensus 43 ~paGl~aA~~~aa~~--G~~V~l~Ek~~~lG----G~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~------~ 110 (276)
+||||+||.. |+++ |++|+|||+++.+| |...+.......+..+.....+++.+.|++++++.++. +
T Consensus 11 G~AGl~aA~~-L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~ 89 (452)
T 3oc4_A 11 SFAGISAAIA-SRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVVAMDVENQ 89 (452)
T ss_dssp SHHHHHHHHH-HHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEEEEETTTT
T ss_pred CHHHHHHHHH-HHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEEEEECCCC
Confidence 6999999999 7887 99999999998877 22222111111122222223466777888887665321 1
Q ss_pred cc---------------hhhhccCCCCCC-------------------------------------CCCCCCcchhhhhC
Q psy12810 111 DI---------------AAKVTNHTPQSD-------------------------------------NQTKHCPPLIVNIV 138 (276)
Q Consensus 111 ~v---------------~v~iiG~gp~~~-------------------------------------g~~Gl~~A~~l~~~ 138 (276)
.+ .+..+|+.|..+ |++|+++|..|++.
T Consensus 90 ~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~ 169 (452)
T 3oc4_A 90 LIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKM 169 (452)
T ss_dssp EEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHT
T ss_pred EEEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhC
Confidence 11 111234433221 55688899999999
Q ss_pred CcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------cchhhhhcccCEEEEcCC
Q psy12810 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD--------IAAKELYEEFDALLLCTG 210 (276)
Q Consensus 139 G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~~~~~~~~~~D~vVlAtG 210 (276)
|.+|+++++.+.+. + ...++++...+.+.+++.||++++++.+..- +..+..++++|.||+|+|
T Consensus 170 g~~Vtlv~~~~~~l-------~-~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~i~aD~Vv~A~G 241 (452)
T 3oc4_A 170 KKTVHVFESLENLL-------P-KYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQEISCDSGIFALN 241 (452)
T ss_dssp TCEEEEEESSSSSS-------T-TTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSCEEEESEEEECSC
T ss_pred CCeEEEEEccCccc-------c-ccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCCEEEeCEEEECcC
Confidence 99999999988642 1 0257788888888999999999999876421 111112688999999999
Q ss_pred CCCCCCCCC
Q psy12810 211 ATWPRDLPI 219 (276)
Q Consensus 211 ~~~p~~~~i 219 (276)
.+ |+...+
T Consensus 242 ~~-p~~~~l 249 (452)
T 3oc4_A 242 LH-PQLAYL 249 (452)
T ss_dssp CB-CCCSSC
T ss_pred CC-CChHHH
Confidence 98 776543
No 85
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.43 E-value=4e-14 Score=130.36 Aligned_cols=141 Identities=18% Similarity=0.176 Sum_probs=94.3
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhh-CCcEEEEEc--------CCCccceeeee-------------------------c
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNI-VGHSVTVFE--------RNDRVGGLLQY-------------------------G 158 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~-~G~~Vtvie--------~~~~~gg~~~~-------------------------~ 158 (276)
.+.|||+||+ |+.+|..|++ .|++|+||| +.+.+||.|.+ +
T Consensus 9 dvvVIGgG~a-----Gl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g 83 (495)
T 2wpf_A 9 DLVVIGAGSG-----GLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFG 83 (495)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CEEEECCChh-----HHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcC
Confidence 4445999999 9999999999 999999999 35567775421 1
Q ss_pred CCCC----CCc-HHHHH-----------HHHHHHHhc-CcEEEeeeeecc-----ccc--hh-----hhhcccCEEEEcC
Q psy12810 159 IPTM----KLS-KEVVQ-----------RRVKLLAAE-GIEFKTNINVGK-----DIA--AK-----ELYEEFDALLLCT 209 (276)
Q Consensus 159 ~~~~----~~~-~~~~~-----------~~~~~l~~~-gv~i~~~~~v~~-----~~~--~~-----~~~~~~D~vVlAt 209 (276)
++.. ..+ .++.. .....+++. +|+++.++.... ... .+ ...+.||+||+||
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViAT 163 (495)
T 2wpf_A 84 WEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLAT 163 (495)
T ss_dssp EECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECC
T ss_pred cccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEeC
Confidence 1100 111 12221 123345667 999998864321 111 11 3468899999999
Q ss_pred CCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 210 GATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 210 G~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
|++ |+.|++||.+ .++++.+++. . ...+++++|||+|++|+|+|..+.+
T Consensus 164 Gs~-p~~p~i~G~~--~~~~~~~~~~----~----------~~~~~~vvViGgG~ig~E~A~~l~~ 212 (495)
T 2wpf_A 164 GSW-PQMPAIPGIE--HCISSNEAFY----L----------PEPPRRVLTVGGGFISVEFAGIFNA 212 (495)
T ss_dssp CEE-ECCCCCTTGG--GCEEHHHHTT----C----------SSCCSEEEEECSSHHHHHHHHHHHH
T ss_pred CCC-cCCCCCCCcc--ccccHHHHHh----h----------hhcCCeEEEECCCHHHHHHHHHHHh
Confidence 998 9988898864 3455433321 1 1357899999999999999988764
No 86
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.42 E-value=5.9e-14 Score=130.62 Aligned_cols=148 Identities=17% Similarity=0.218 Sum_probs=100.3
Q ss_pred cchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec-CCC---------------------------C
Q psy12810 111 DIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG-IPT---------------------------M 162 (276)
Q Consensus 111 ~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~-~~~---------------------------~ 162 (276)
.+.+.|||+|++ |+.+|..|++.|.+|+|||+.+.+||.|..+ .|. +
T Consensus 16 ~~dVvIIGaG~a-----Gl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~ 90 (542)
T 1w4x_A 16 EVDVLVVGAGFS-----GLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERY 90 (542)
T ss_dssp EEEEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSS
T ss_pred CCCEEEECccHH-----HHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCccccc
Confidence 344556999999 9999999999999999999999998877421 110 1
Q ss_pred CCcHHHHHHHHHHHHhcC--cEEEeeeeecc-c---------cc-hhhhhcccCEEEEcCCCC-CCCCCCCCCcC-CCC-
Q psy12810 163 KLSKEVVQRRVKLLAAEG--IEFKTNINVGK-D---------IA-AKELYEEFDALLLCTGAT-WPRDLPIPGRQ-LSG- 226 (276)
Q Consensus 163 ~~~~~~~~~~~~~l~~~g--v~i~~~~~v~~-~---------~~-~~~~~~~~D~vVlAtG~~-~p~~~~i~g~~-~~g- 226 (276)
....++..++....++.+ ++++++++|.. + +. .+..++.+|.||+|+|.. .|+.|++||.+ .+|
T Consensus 91 ~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~ 170 (542)
T 1w4x_A 91 ASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGN 170 (542)
T ss_dssp CBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSE
T ss_pred CCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCc
Confidence 112344555555555555 56777776641 0 11 112257899999999964 38888899976 455
Q ss_pred eeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 227 IYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 227 v~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
++++..+.++ .. ...+|+|+|||+|.+|+|+|..+.+
T Consensus 171 ~~hs~~~~~~----------~~--~~~gk~V~VIG~G~sg~e~a~~l~~ 207 (542)
T 1w4x_A 171 LYHTGNWPHE----------PV--DFSGQRVGVIGTGSSGIQVSPQIAK 207 (542)
T ss_dssp EEEGGGCCSS----------CC--CCBTCEEEEECCSHHHHHHHHHHHH
T ss_pred eEECCCCCCc----------hh--ccCCCEEEEECCCccHHHHHHHHhh
Confidence 3443322110 01 2578999999999999999988753
No 87
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.41 E-value=2.1e-13 Score=117.63 Aligned_cols=160 Identities=18% Similarity=0.146 Sum_probs=101.0
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeecC----------CCCC---CCHHHHHHHHHHHHhCCCeEEecccc-
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYGI----------PTMK---LSKEVVQRRVKLLAAEGIEFKTNINV- 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~~----------~~~~---~~~~~~~~~~~~l~~~gv~~~~~~~v- 108 (276)
+||||+||+. |+++|++|+|||+.. .||.|..|+ |.+. ...++..+....+.+.++++..+...
T Consensus 13 GpAGl~AA~~-la~~g~~v~liE~~~-~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~~~v~~ 90 (314)
T 4a5l_A 13 GPAAHTAAIY-LGRSSLKPVMYEGFM-AGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITETIDH 90 (314)
T ss_dssp SHHHHHHHHH-HHHTTCCCEEECCSS-GGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECCCEEE
T ss_pred CHHHHHHHHH-HHHCCCCEEEEecCC-CCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEEeEEEE
Confidence 6999999999 899999999999975 666664442 2222 22567777788888888877654210
Q ss_pred --------------Cc----cchhhhccCCCCCC------------------------------------CCCCCCcchh
Q psy12810 109 --------------GK----DIAAKVTNHTPQSD------------------------------------NQTKHCPPLI 134 (276)
Q Consensus 109 --------------~~----~v~v~iiG~gp~~~------------------------------------g~~Gl~~A~~ 134 (276)
+. +..+..+|+.|..+ |++|+++|..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~ 170 (314)
T 4a5l_A 91 VDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALH 170 (314)
T ss_dssp EECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHH
T ss_pred eecCCCceEEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHH
Confidence 00 00111223322111 4559999999
Q ss_pred hhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---------------ccchhhhh
Q psy12810 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---------------DIAAKELY 199 (276)
Q Consensus 135 l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---------------~~~~~~~~ 199 (276)
|++.|.+||++++.+.. ...... ..+.....++..++.+.... ...++..+
T Consensus 171 l~~~G~~Vt~v~~~~~~-----------~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
T 4a5l_A 171 LTKYGSKVIILHRRDAF-----------RASKTM---QERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKV 236 (314)
T ss_dssp HTTTSSEEEEECSSSSC-----------CSCHHH---HHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEE
T ss_pred HHHhCCeeeeecccccc-----------cccchh---hhhhhcccceeeEeeeeeEEEEeeeeccceeEEeeccccccee
Confidence 99999999999987643 122222 12223445666555543320 01223446
Q ss_pred cccCEEEEcCCCCCCCCCCC
Q psy12810 200 EEFDALLLCTGATWPRDLPI 219 (276)
Q Consensus 200 ~~~D~vVlAtG~~~p~~~~i 219 (276)
+++|.|++|+|.. |+...+
T Consensus 237 i~~d~vi~a~G~~-pn~~~l 255 (314)
T 4a5l_A 237 VPVAGLFYAIGHS-PNSKFL 255 (314)
T ss_dssp EECSEEEECSCEE-ESCGGG
T ss_pred eccccceEecccc-cChhHh
Confidence 8999999999998 876544
No 88
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.41 E-value=2.1e-13 Score=124.18 Aligned_cols=165 Identities=20% Similarity=0.268 Sum_probs=109.3
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-cC-CC------------------------CCCC-HHHHH------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-GI-PT------------------------MKLS-KEVVQ------ 89 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-~~-~~------------------------~~~~-~~~~~------ 89 (276)
+|||++||.. |+++|++|+|+|+++.+||+|.. ++ |. ...+ ..+..
T Consensus 10 G~aGl~aA~~-l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 88 (455)
T 2yqu_A 10 GPGGYVAAIR-AAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALMAHKDKVV 88 (455)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHHHHHHHHH
T ss_pred ChhHHHHHHH-HHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHHHHHHHHH
Confidence 6999999999 89999999999999889998742 21 10 0011 11111
Q ss_pred -----HHHHHHHhCCCeEEecccc------------Cccc----hhhhccCCCCCC------------------------
Q psy12810 90 -----RRVKLLAAEGIEFKTNINV------------GKDI----AAKVTNHTPQSD------------------------ 124 (276)
Q Consensus 90 -----~~~~~l~~~gv~~~~~~~v------------~~~v----~v~iiG~gp~~~------------------------ 124 (276)
.....+++.|+++..+..+ +..+ .+..+|+.|..+
T Consensus 89 ~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g~~~~~v~~~~~~~~~~~~~~ 168 (455)
T 2yqu_A 89 QANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEALSFPEVPK 168 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEECCCTTBCCCSSSEECHHHHTCCSSCCS
T ss_pred HHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCCCCCCCCCCCcCcEechHHhhccccCCC
Confidence 1234566678888765421 0000 011123211110
Q ss_pred -------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc-c----
Q psy12810 125 -------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK-D---- 192 (276)
Q Consensus 125 -------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~-~---- 192 (276)
|.+|+++|..|++.|.+|+++++.+.+. | ..++++...+.+.+++.||++++++.+.. +
T Consensus 169 ~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-------~--~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~ 239 (455)
T 2yqu_A 169 RLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-------P--TMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK 239 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------T--TSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-------c--ccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC
Confidence 4458999999999999999999988642 1 34667777888888999999999987641 1
Q ss_pred ---cc-hhhhhcccCEEEEcCCCCCCCCCC
Q psy12810 193 ---IA-AKELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 193 ---~~-~~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
.. .+..++++|.||+|+|.+ |+...
T Consensus 240 ~v~v~~~~g~~i~~D~vv~A~G~~-p~~~~ 268 (455)
T 2yqu_A 240 GARVELEGGEVLEADRVLVAVGRR-PYTEG 268 (455)
T ss_dssp EEEEEETTSCEEEESEEEECSCEE-ECCTT
T ss_pred EEEEEECCCeEEEcCEEEECcCCC-cCCCC
Confidence 11 123457899999999998 77654
No 89
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.40 E-value=1.3e-13 Score=126.51 Aligned_cols=141 Identities=18% Similarity=0.229 Sum_probs=94.0
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeee-------------------------ecCCC--CCCc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQ-------------------------YGIPT--MKLS 165 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~-------------------------~~~~~--~~~~ 165 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+.+.+||.+. ++++. ...+
T Consensus 8 dVvIIGaG~a-----Gl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~ 82 (482)
T 1ojt_A 8 DVVVLGGGPG-----GYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELD 82 (482)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCC
T ss_pred CEEEECCCHH-----HHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccC
Confidence 3445999999 99999999999999999999887775431 11110 0111
Q ss_pred -HHHHH-----------HHHHHHHhcCcEEEeeeeeccc-----cc---h----------hhhhcccCEEEEcCCCCCCC
Q psy12810 166 -KEVVQ-----------RRVKLLAAEGIEFKTNINVGKD-----IA---A----------KELYEEFDALLLCTGATWPR 215 (276)
Q Consensus 166 -~~~~~-----------~~~~~l~~~gv~i~~~~~v~~~-----~~---~----------~~~~~~~D~vVlAtG~~~p~ 215 (276)
..+.. .+...+++.|++++.++.+..+ +. + +..++.||.||+|||++ |.
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~-p~ 161 (482)
T 1ojt_A 83 IDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSR-VT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEE-EC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCC-CC
Confidence 11111 1234566789999998754311 11 1 11468899999999998 87
Q ss_pred CCC-CCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 216 DLP-IPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 216 ~~~-i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
.|+ ++ .+. .+++..+++. + ...+++++|||||++|+|+|..+.+
T Consensus 162 ~~~~i~-~~~-~v~~~~~~~~----~----------~~~~~~vvViGgG~ig~E~A~~l~~ 206 (482)
T 1ojt_A 162 KLPFIP-EDP-RIIDSSGALA----L----------KEVPGKLLIIGGGIIGLEMGTVYST 206 (482)
T ss_dssp CCSSCC-CCT-TEECHHHHTT----C----------CCCCSEEEEESCSHHHHHHHHHHHH
T ss_pred CCCCCC-ccC-cEEcHHHHhc----c----------cccCCeEEEECCCHHHHHHHHHHHH
Confidence 776 65 332 4665443321 1 1357999999999999999988764
No 90
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.39 E-value=4.9e-13 Score=122.09 Aligned_cols=164 Identities=22% Similarity=0.234 Sum_probs=108.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-cC-CC------------------------CCCC-HHHHHH-----
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-GI-PT------------------------MKLS-KEVVQR----- 90 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-~~-~~------------------------~~~~-~~~~~~----- 90 (276)
+|||++||.. |+++|++|+|+|+++ +||+|.. ++ |. ...+ ..+..+
T Consensus 15 G~aG~~aA~~-l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 92 (464)
T 2eq6_A 15 GPGGYHAAIR-AAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLGGWRDQVV 92 (464)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHHHHHHHHHH
Confidence 6999999999 899999999999987 9998832 21 10 0011 122111
Q ss_pred ------HHHHHHhCCCeEEecccc----------Cc----cchhhhccCCCCCC--------------------------
Q psy12810 91 ------RVKLLAAEGIEFKTNINV----------GK----DIAAKVTNHTPQSD-------------------------- 124 (276)
Q Consensus 91 ------~~~~l~~~gv~~~~~~~v----------~~----~v~v~iiG~gp~~~-------------------------- 124 (276)
....+++.||+++.++.+ +. +..+..+|+.|..+
T Consensus 93 ~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~g~~~~~d~lViATGs~p~~p~gi~~~~~v~~~~~~~~l~~~~~~~v 172 (464)
T 2eq6_A 93 KKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRL 172 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCEEECCBTTBCCSSSEECHHHHTCGGGCCCSEE
T ss_pred HHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEccEEEEeCEEEEcCCCCCCCCCCCCCCCcEEcHHHHHhhhhhcCCEE
Confidence 234566789988766421 00 00011122211100
Q ss_pred -----CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c----
Q psy12810 125 -----NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D---- 192 (276)
Q Consensus 125 -----g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~---- 192 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+.. +
T Consensus 173 vViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------~--~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~ 243 (464)
T 2eq6_A 173 LVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL-------P--QGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGL 243 (464)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------T--TSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEE
T ss_pred EEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc-------c--ccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEE
Confidence 4559999999999999999999988642 1 35677777888889999999999987641 0
Q ss_pred -c----c--hhhhhcccCEEEEcCCCCCCCCCC
Q psy12810 193 -I----A--AKELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 193 -~----~--~~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
+ + ++..++++|.||+|+|.+ |+...
T Consensus 244 ~v~~~~~~~g~~~~i~~D~vv~a~G~~-p~~~~ 275 (464)
T 2eq6_A 244 HVRLEPAEGGEGEEVVVDKVLVAVGRK-PRTEG 275 (464)
T ss_dssp EEEEEETTCCSCEEEEESEEEECSCEE-ESCTT
T ss_pred EEEEeecCCCceeEEEcCEEEECCCcc-cCCCC
Confidence 1 1 111268899999999998 77654
No 91
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.39 E-value=1.8e-13 Score=125.92 Aligned_cols=139 Identities=17% Similarity=0.114 Sum_probs=99.2
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCC---CCC-CcHHHHHHHHHHHHhcCcEEEeeee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIP---TMK-LSKEVVQRRVKLLAAEGIEFKTNIN 188 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~---~~~-~~~~~~~~~~~~l~~~gv~i~~~~~ 188 (276)
.+.|||+|++ |+.+|..|++. ++|+|||+++.+||.+.+... .+. ...++...+.+.+ +.++++++++.
T Consensus 110 dVvIIGgG~a-----Gl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~ 182 (493)
T 1y56_A 110 DVAIIGGGPA-----GIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETS 182 (493)
T ss_dssp SCCEECCSHH-----HHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEE
T ss_pred CEEEECccHH-----HHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCE
Confidence 3445999999 99999999999 999999999998876643211 001 2334444444444 56899988887
Q ss_pred ecc-cc----------c-hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCe
Q psy12810 189 VGK-DI----------A-AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKN 256 (276)
Q Consensus 189 v~~-~~----------~-~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~ 256 (276)
+.. +. . ++...+.||+||+|||+. |+.+++||.+.+++++..++....+.. ....+++
T Consensus 183 v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~-~~~~~~~g~~~~gv~~~~~~~~~~~~~---------~~~~~~~ 252 (493)
T 1y56_A 183 ALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAI-DSTMLFENNDMPGVFRRDFALEVMNVW---------EVAPGRK 252 (493)
T ss_dssp ECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEE-ECCCCCTTTTSTTEEEHHHHHHHHHTS---------CBCSCSE
T ss_pred EEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCC-ccCCCCCCCCCCCEEEcHHHHHHHHhc---------ccCCCCE
Confidence 641 10 1 111257899999999998 999999999989998876544322211 0246799
Q ss_pred EEEEcCChHHHH
Q psy12810 257 VIVIGGGDTGCD 268 (276)
Q Consensus 257 vvVIGgG~~G~E 268 (276)
++|||+|++|+|
T Consensus 253 vvViGgG~~gle 264 (493)
T 1y56_A 253 VAVTGSKADEVI 264 (493)
T ss_dssp EEEESTTHHHHH
T ss_pred EEEECCCHHHHH
Confidence 999999999998
No 92
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.39 E-value=3.8e-13 Score=122.86 Aligned_cols=82 Identities=22% Similarity=0.201 Sum_probs=62.9
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------cchh
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD--------IAAK 196 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~~~~ 196 (276)
|++|+++|..|++.|.+|+++++.+.+. +.++++...+.+.+++.||++++++.+..- +..+
T Consensus 185 G~~g~E~A~~l~~~g~~Vtlv~~~~~~l----------~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~ 254 (467)
T 1zk7_A 185 SVVALELAQAFARLGSKVTVLARNTLFF----------REDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT 254 (467)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSCTTT----------TSCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET
T ss_pred CHHHHHHHHHHHHcCCEEEEEEECCccC----------CCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC
Confidence 4458899999999999999999988642 146677788888899999999999876421 1112
Q ss_pred hhhcccCEEEEcCCCCCCCCC
Q psy12810 197 ELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 197 ~~~~~~D~vVlAtG~~~p~~~ 217 (276)
..++++|.||+|+|.+ |+..
T Consensus 255 ~~~i~aD~Vv~a~G~~-p~~~ 274 (467)
T 1zk7_A 255 HGELRADKLLVATGRT-PNTR 274 (467)
T ss_dssp TEEEEESEEEECSCEE-ESCT
T ss_pred CcEEEcCEEEECCCCC-cCCC
Confidence 2367899999999998 7753
No 93
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.39 E-value=5.2e-14 Score=129.45 Aligned_cols=141 Identities=16% Similarity=0.161 Sum_probs=94.0
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhh-CCcEEEEEc--------CCCccceeeee-------------------------c
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNI-VGHSVTVFE--------RNDRVGGLLQY-------------------------G 158 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~-~G~~Vtvie--------~~~~~gg~~~~-------------------------~ 158 (276)
.+.|||+||+ |+.+|..|++ .|++|+||| +.+.+||.+.. +
T Consensus 5 dvvVIGgG~a-----Gl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g 79 (490)
T 1fec_A 5 DLVVIGAGSG-----GLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFG 79 (490)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGT
T ss_pred cEEEECCCHH-----HHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcC
Confidence 3445999999 9999999999 999999999 35567775421 1
Q ss_pred CCCC----CCc-HHHH-----------HHHHHHHHhc-CcEEEeeeeecc-----ccc----hhh---hhcccCEEEEcC
Q psy12810 159 IPTM----KLS-KEVV-----------QRRVKLLAAE-GIEFKTNINVGK-----DIA----AKE---LYEEFDALLLCT 209 (276)
Q Consensus 159 ~~~~----~~~-~~~~-----------~~~~~~l~~~-gv~i~~~~~v~~-----~~~----~~~---~~~~~D~vVlAt 209 (276)
+... ..+ ..+. ....+.+++. ||+++.++.... ... .+. ..+.||+||+||
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAt 159 (490)
T 1fec_A 80 WELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLAT 159 (490)
T ss_dssp EECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECC
T ss_pred cccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeC
Confidence 1100 011 1121 1223445677 999998874321 111 022 468899999999
Q ss_pred CCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 210 GATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 210 G~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
|++ |..|++||.+ .++++.+++. . ...+++++|||||++|+|+|..+.+
T Consensus 160 Gs~-p~~p~i~g~~--~~~~~~~~~~----~----------~~~~~~vvViGgG~ig~E~A~~l~~ 208 (490)
T 1fec_A 160 GSW-PQHLGIEGDD--LCITSNEAFY----L----------DEAPKRALCVGGGYISIEFAGIFNA 208 (490)
T ss_dssp CEE-ECCCCSBTGG--GCBCHHHHTT----C----------SSCCSEEEEECSSHHHHHHHHHHHH
T ss_pred CCC-CCCCCCCCcc--ceecHHHHhh----h----------hhcCCeEEEECCCHHHHHHHHHHHh
Confidence 998 9888888863 3444333221 1 1457899999999999999988764
No 94
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.39 E-value=1.2e-12 Score=113.01 Aligned_cols=159 Identities=13% Similarity=0.154 Sum_probs=99.7
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-c----CCCCCCC--HHHHHHHHHHHHhCCCeEEecccc-------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-G----IPTMKLS--KEVVQRRVKLLAAEGIEFKTNINV------- 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-~----~~~~~~~--~~~~~~~~~~l~~~gv~~~~~~~v------- 108 (276)
+||||+||+. |+++|++|+||||. .+||+|.. + +|.+... .++..+......+.+..+..+...
T Consensus 15 GpAGl~aA~~-l~~~g~~V~liE~~-~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (312)
T 4gcm_A 15 GPAGMTAAVY-ASRANLKTVMIERG-IPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGE 92 (312)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSS
T ss_pred CHHHHHHHHH-HHHCCCCEEEEecC-CCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeeeeeeec
Confidence 6999999999 89999999999995 59999853 2 3544433 456666666777777666554211
Q ss_pred -------Cc----cchhhhccCCCCCC----------------------------------CCCCCCcchhhhhCCcEEE
Q psy12810 109 -------GK----DIAAKVTNHTPQSD----------------------------------NQTKHCPPLIVNIVGHSVT 143 (276)
Q Consensus 109 -------~~----~v~v~iiG~gp~~~----------------------------------g~~Gl~~A~~l~~~G~~Vt 143 (276)
++ +..+..+|+.|..+ |++|+++|..|++.|.+||
T Consensus 93 ~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vt 172 (312)
T 4gcm_A 93 YKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVT 172 (312)
T ss_dssp CEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEE
T ss_pred ceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEE
Confidence 00 00111123211110 3449999999999999999
Q ss_pred EEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---------------ccchhhhhcccCEEEEc
Q psy12810 144 VFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---------------DIAAKELYEEFDALLLC 208 (276)
Q Consensus 144 vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---------------~~~~~~~~~~~D~vVlA 208 (276)
++++.+++. .... ...+.+...++.+.....+.. ...++...+++|.|+++
T Consensus 173 lv~~~~~~~-----------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~ 238 (312)
T 4gcm_A 173 IVHRRDELR-----------AQRI---LQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIY 238 (312)
T ss_dssp EECSSSSCC-----------SCHH---HHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred EEecccccC-----------cchh---HHHHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEee
Confidence 999988641 1111 122334555666655443320 11223346789999999
Q ss_pred CCCCCCCCCC
Q psy12810 209 TGATWPRDLP 218 (276)
Q Consensus 209 tG~~~p~~~~ 218 (276)
+|.. |+...
T Consensus 239 ~g~~-~~~~~ 247 (312)
T 4gcm_A 239 IGMK-PLTAP 247 (312)
T ss_dssp SCEE-ESCGG
T ss_pred cCCC-cCchh
Confidence 9998 76543
No 95
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.38 E-value=9.8e-13 Score=120.50 Aligned_cols=164 Identities=18% Similarity=0.228 Sum_probs=108.2
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-------------------------cCCC--CCCC-HHH-------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-------------------------GIPT--MKLS-KEV------- 87 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-------------------------~~~~--~~~~-~~~------- 87 (276)
+|||++||+. |+++|++|+|+||+ .+||+|.. +++. ...+ ..+
T Consensus 29 G~aGl~aA~~-la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 106 (478)
T 3dk9_A 29 GSGGLASARR-AAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAY 106 (478)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHHHHHHHHHHH
Confidence 6999999999 89999999999986 69999733 1111 1111 111
Q ss_pred ----HHHHHHHHHhCCCeEEecccc------------C----ccchhhhccCCCCC------C-----------------
Q psy12810 88 ----VQRRVKLLAAEGIEFKTNINV------------G----KDIAAKVTNHTPQS------D----------------- 124 (276)
Q Consensus 88 ----~~~~~~~l~~~gv~~~~~~~v------------~----~~v~v~iiG~gp~~------~----------------- 124 (276)
.......+++.||++..+... + -+..+..+|+.|.. +
T Consensus 107 ~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~~~~~~~~~~~~~~~ 186 (478)
T 3dk9_A 107 VSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEEL 186 (478)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEETTEEEECSCEEECCCEEECCCCTTTSTTGGGSBCHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEECCEEEEeeEEEEccCCCCCCCCcCCCCCCceeEchHHhhchhhc
Confidence 122335566789988765321 0 01111112332211 0
Q ss_pred ---------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c
Q psy12810 125 ---------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D 192 (276)
Q Consensus 125 ---------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~ 192 (276)
|++|+++|..|++.|.+|+++++.+++. + ..++++...+.+.+++.||++++++.+.. +
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---~------~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~ 257 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL---R------SFDSMISTNCTEELENAGVEVLKFSQVKEVKKT 257 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC---T------TSCHHHHHHHHHHHHHTTCEEETTEEEEEEEEC
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc---c------ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEc
Confidence 4458899999999999999999988742 1 35677888888889999999999876641 0
Q ss_pred -------c--ch----h--hhhcccCEEEEcCCCCCCCCCC
Q psy12810 193 -------I--AA----K--ELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 193 -------~--~~----~--~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
+ .. + ..++++|.||+|+|.. |+...
T Consensus 258 ~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~-p~~~~ 297 (478)
T 3dk9_A 258 LSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV-PNTKD 297 (478)
T ss_dssp SSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEE-ESCTT
T ss_pred CCCcEEEEEEccCCCCcccceEEEcCEEEEeeccc-cCCCC
Confidence 0 00 0 1457899999999998 77653
No 96
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.38 E-value=7.5e-13 Score=120.86 Aligned_cols=163 Identities=18% Similarity=0.189 Sum_probs=107.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-------------------------cCCC--CCCC-HHHH------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-------------------------GIPT--MKLS-KEVV------ 88 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-------------------------~~~~--~~~~-~~~~------ 88 (276)
+|||++||.. |+++|++|+|||++ .+||+|.. +++. .... ..+.
T Consensus 13 G~aGl~aA~~-l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 90 (463)
T 2r9z_A 13 GSGGLAVAEK-AAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPRLVAGRDRY 90 (463)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHHHHHHHHHH
Confidence 6999999999 89999999999997 69999842 1110 0111 1111
Q ss_pred -----HHHHHHHHhCCCeEEecccc---Cccc-----------hhhhccCCCCCC-------------------------
Q psy12810 89 -----QRRVKLLAAEGIEFKTNINV---GKDI-----------AAKVTNHTPQSD------------------------- 124 (276)
Q Consensus 89 -----~~~~~~l~~~gv~~~~~~~v---~~~v-----------~v~iiG~gp~~~------------------------- 124 (276)
..+...+++.||++..+... .+.+ .+..+|+.|..|
T Consensus 91 ~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~vv 170 (463)
T 2r9z_A 91 IGAINSFWDGYVERLGITRVDGHARFVDAHTIEVEGQRLSADHIVIATGGRPIVPRLPGAELGITSDGFFALQQQPKRVA 170 (463)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCEEECCCSCTTGGGSBCHHHHHHCSSCCSEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEECCEEEEcCEEEECCCCCCCCCCCCCccceecHHHHhhhhccCCEEE
Confidence 12234456789988766321 0001 111123322111
Q ss_pred ----CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------
Q psy12810 125 ----NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD-------- 192 (276)
Q Consensus 125 ----g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~-------- 192 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+..-
T Consensus 171 VvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-------~--~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~ 241 (463)
T 2r9z_A 171 IIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-------F--QFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTT 241 (463)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------T--TSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEE
T ss_pred EECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-------c--ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEE
Confidence 4559999999999999999999987642 1 356677778888899999999999876411
Q ss_pred cc-hhhh-hcccCEEEEcCCCCCCCCC
Q psy12810 193 IA-AKEL-YEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 193 ~~-~~~~-~~~~D~vVlAtG~~~p~~~ 217 (276)
+. .+.. ++++|.||+|+|.+ |+..
T Consensus 242 v~~~~G~~~i~~D~vv~a~G~~-p~~~ 267 (463)
T 2r9z_A 242 LVAQDGTRLEGFDSVIWAVGRA-PNTR 267 (463)
T ss_dssp EEETTCCEEEEESEEEECSCEE-ESCT
T ss_pred EEEeCCcEEEEcCEEEECCCCC-cCCC
Confidence 11 1122 58899999999998 7764
No 97
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.38 E-value=1e-12 Score=121.70 Aligned_cols=83 Identities=16% Similarity=0.250 Sum_probs=61.4
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeec---c-c--------
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVG---K-D-------- 192 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~---~-~-------- 192 (276)
|++|+++|..|++.|.+|+++++.. + ++ ..++++...+.+.+++.||++++++.+. . +
T Consensus 219 G~ig~E~A~~l~~~G~~Vtlv~~~~-~---l~------~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~ 288 (519)
T 3qfa_A 219 SYVALECAGFLAGIGLDVTVMVRSI-L---LR------GFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLR 288 (519)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEESSC-S---ST------TSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEE
T ss_pred cHHHHHHHHHHHHcCCeEEEEeccc-c---cc------cCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEE
Confidence 5569999999999999999999843 2 11 3577888888888999999999986543 1 0
Q ss_pred c-----chhh-hhcccCEEEEcCCCCCCCCCC
Q psy12810 193 I-----AAKE-LYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 193 ~-----~~~~-~~~~~D~vVlAtG~~~p~~~~ 218 (276)
+ ++.+ .++++|.||+|+|.. |+...
T Consensus 289 v~~~~~~g~~~~~~~~D~vi~a~G~~-p~~~~ 319 (519)
T 3qfa_A 289 VVAQSTNSEEIIEGEYNTVMLAIGRD-ACTRK 319 (519)
T ss_dssp EEEEESSSSCEEEEEESEEEECSCEE-ESCSS
T ss_pred EEEEECCCcEEEEEECCEEEEecCCc-ccCCC
Confidence 0 1111 346799999999998 77653
No 98
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.38 E-value=1.2e-13 Score=126.07 Aligned_cols=140 Identities=16% Similarity=0.182 Sum_probs=94.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-------------------------cCC--CCCCc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-------------------------GIP--TMKLS 165 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-------------------------~~~--~~~~~ 165 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+ +.+||.+.+ +++ ....+
T Consensus 7 DVvVIGaG~a-----Gl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 80 (463)
T 4dna_A 7 DLFVIGGGSG-----GVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFD 80 (463)
T ss_dssp EEEEECCSHH-----HHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEEC
T ss_pred cEEEECcCHH-----HHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcC
Confidence 3445999999 99999999999999999999 667764321 110 00011
Q ss_pred -H-----------HHHHHHHHHHHhcCcEEEeeeeeccc-----cchhhhhcccCEEEEcCCCCCCC-CCCCCCcCCCCe
Q psy12810 166 -K-----------EVVQRRVKLLAAEGIEFKTNINVGKD-----IAAKELYEEFDALLLCTGATWPR-DLPIPGRQLSGI 227 (276)
Q Consensus 166 -~-----------~~~~~~~~~l~~~gv~i~~~~~v~~~-----~~~~~~~~~~D~vVlAtG~~~p~-~~~i~g~~~~gv 227 (276)
. .+...+...+.+.+++++.+.....+ ...+...+.||.+|+|||+. |. .|++||.+. +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~-p~~~p~i~G~~~--~ 157 (463)
T 4dna_A 81 WAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGH-PSPHDALPGHEL--C 157 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEE-ECCCTTSTTGGG--C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCC-cccCCCCCCccc--c
Confidence 1 12222344566679999888533211 11133468899999999998 88 888988652 3
Q ss_pred eehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 228 YFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 228 ~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+++.+++.. ...+++++|||+|++|+|+|..+.+
T Consensus 158 ~~~~~~~~~--------------~~~~~~v~ViGgG~~g~e~A~~l~~ 191 (463)
T 4dna_A 158 ITSNEAFDL--------------PALPESILIAGGGYIAVEFANIFHG 191 (463)
T ss_dssp BCHHHHTTC--------------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred ccHHHHhhh--------------hcCCCeEEEECCCHHHHHHHHHHHH
Confidence 443332210 1458999999999999999988765
No 99
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.38 E-value=2.1e-13 Score=125.17 Aligned_cols=144 Identities=19% Similarity=0.224 Sum_probs=93.0
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCC---C------ccceeee-------------------------e
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERN---D------RVGGLLQ-------------------------Y 157 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~---~------~~gg~~~-------------------------~ 157 (276)
+.+.|||+||+ |+.+|..|++.|++|+|||+. + .+||.|. +
T Consensus 10 ~DvvVIGgG~a-----Gl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~ 84 (483)
T 3dgh_A 10 YDLIVIGGGSA-----GLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAY 84 (483)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEECcCHH-----HHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhc
Confidence 34445999999 999999999999999999942 1 2566442 1
Q ss_pred cCCC---CCCc-HHHHHH-----------HHHHHHhcCcEEEeeeeeccc-----c--chhhhhcccCEEEEcCCCCCCC
Q psy12810 158 GIPT---MKLS-KEVVQR-----------RVKLLAAEGIEFKTNINVGKD-----I--AAKELYEEFDALLLCTGATWPR 215 (276)
Q Consensus 158 ~~~~---~~~~-~~~~~~-----------~~~~l~~~gv~i~~~~~v~~~-----~--~~~~~~~~~D~vVlAtG~~~p~ 215 (276)
+++. ...+ ..+..+ ....+...+++++.+.....+ + .+.+.++.||+||+|||++ |+
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~-p~ 163 (483)
T 3dgh_A 85 GWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGR-PR 163 (483)
T ss_dssp TBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEE-EC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCC-cC
Confidence 2211 0111 122111 123356678988776543211 1 1122468999999999998 99
Q ss_pred CCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 216 DLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 216 ~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
.|++||.+... +++.+++. . ...+++++|||+|++|+|+|..+.++
T Consensus 164 ~p~i~G~~~~~-~~~~~~~~----~----------~~~~~~vvViGgG~~g~E~A~~l~~~ 209 (483)
T 3dgh_A 164 YPDIPGAVEYG-ITSDDLFS----L----------DREPGKTLVVGAGYIGLECAGFLKGL 209 (483)
T ss_dssp CCSSTTHHHHC-BCHHHHTT----C----------SSCCCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCCCCCccccc-CcHHHHhh----h----------hhcCCcEEEECCCHHHHHHHHHHHHc
Confidence 99999875332 33322221 0 14578999999999999999988753
No 100
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.38 E-value=3.4e-13 Score=123.21 Aligned_cols=164 Identities=20% Similarity=0.229 Sum_probs=109.1
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-cC-CC---------------------------CCCC-HHHH----
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-GI-PT---------------------------MKLS-KEVV---- 88 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-~~-~~---------------------------~~~~-~~~~---- 88 (276)
+|||++||+. |+++|++|+|+|+++.+||+|.. ++ |. .... ..+.
T Consensus 11 G~aGl~aA~~-l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 89 (468)
T 2qae_A 11 GPGGYVASIK-AAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSAKMQQQKE 89 (468)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECHHHHHHHHH
T ss_pred CHHHHHHHHH-HHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHHHHHHHHH
Confidence 6999999999 89999999999999889998742 21 10 0001 1111
Q ss_pred -------HHHHHHHHhCCCeEEecccc-------------C--ccch----hhhccCCCCCC------------------
Q psy12810 89 -------QRRVKLLAAEGIEFKTNINV-------------G--KDIA----AKVTNHTPQSD------------------ 124 (276)
Q Consensus 89 -------~~~~~~l~~~gv~~~~~~~v-------------~--~~v~----v~iiG~gp~~~------------------ 124 (276)
......+++.||+++.++.+ + ..+. +..+|+.|..+
T Consensus 90 ~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~~~~v~t~~~~~~ 169 (468)
T 2qae_A 90 RAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSSTGALA 169 (468)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCCSSSEECHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCCcCceechHHHhh
Confidence 11235566778887766421 1 1111 11123211110
Q ss_pred -------------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHH-HhcCcEEEeeeeec
Q psy12810 125 -------------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLL-AAEGIEFKTNINVG 190 (276)
Q Consensus 125 -------------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~i~~~~~v~ 190 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+ ++.||++++++.+.
T Consensus 170 ~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------~--~~d~~~~~~l~~~l~~~~gv~i~~~~~v~ 240 (468)
T 2qae_A 170 LPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-------P--TLDEDVTNALVGALAKNEKMKFMTSTKVV 240 (468)
T ss_dssp CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------T--TSCHHHHHHHHHHHHHHTCCEEECSCEEE
T ss_pred cccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-------c--cCCHHHHHHHHHHHhhcCCcEEEeCCEEE
Confidence 5568999999999999999999988742 1 35677888888889 89999999987764
Q ss_pred c---c-------c---chhhhhcccCEEEEcCCCCCCCCC
Q psy12810 191 K---D-------I---AAKELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 191 ~---~-------~---~~~~~~~~~D~vVlAtG~~~p~~~ 217 (276)
. + . +++..++++|.||+|+|.+ |+..
T Consensus 241 ~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~-p~~~ 279 (468)
T 2qae_A 241 GGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRR-PFTG 279 (468)
T ss_dssp EEEECSSSEEEEEECC---EEEEEESEEEECSCEE-ECCT
T ss_pred EEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcc-cCCC
Confidence 1 0 1 1112468899999999998 7764
No 101
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.38 E-value=1e-12 Score=113.61 Aligned_cols=162 Identities=14% Similarity=0.106 Sum_probs=109.2
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeec-----CCCCC---CCHHHHHHHHHHHHhCCCeEEecccc------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYG-----IPTMK---LSKEVVQRRVKLLAAEGIEFKTNINV------ 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~-----~~~~~---~~~~~~~~~~~~l~~~gv~~~~~~~v------ 108 (276)
+|||++||+. |+++|++|+|||+. .+||.+.+. .|.+. ....+.+++.+.+.+.|++++.++..
T Consensus 14 G~aGl~aA~~-l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 91 (320)
T 1trb_A 14 GPAGYTAAVY-AARANLQPVLITGM-EKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQN 91 (320)
T ss_dssp SHHHHHHHHH-HHTTTCCCEEECCS-STTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCCEEEEECSS
T ss_pred CHHHHHHHHH-HHHCCCcEEEEccC-CCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEeeeeEEEecC
Confidence 6999999999 89999999999985 699987653 23332 12566677777888889887655310
Q ss_pred --------Ccc----chhhhccCCCCCC----------------------------------CCCCCCcchhhhhCCcEE
Q psy12810 109 --------GKD----IAAKVTNHTPQSD----------------------------------NQTKHCPPLIVNIVGHSV 142 (276)
Q Consensus 109 --------~~~----v~v~iiG~gp~~~----------------------------------g~~Gl~~A~~l~~~G~~V 142 (276)
+.. ..+...|+.|..+ |.+|+++|..|++.|.+|
T Consensus 92 ~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~V 171 (320)
T 1trb_A 92 RPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEV 171 (320)
T ss_dssp SSEEEEESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEE
T ss_pred CEEEEEeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeE
Confidence 000 0000112211110 334788888899999999
Q ss_pred EEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c------c--c-----hhhhhcccCEEE
Q psy12810 143 TVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D------I--A-----AKELYEEFDALL 206 (276)
Q Consensus 143 tvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~------~--~-----~~~~~~~~D~vV 206 (276)
+++++.+.+ ..++.+...+.+.+++.||++++++.+.. + + . ++..++++|.||
T Consensus 172 tlv~~~~~~-----------~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv 240 (320)
T 1trb_A 172 HLIHRRDGF-----------RAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLF 240 (320)
T ss_dssp EEECSSSSC-----------CCCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEE
T ss_pred EEEEeCCcc-----------ccCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEE
Confidence 999988754 13455666677778889999999877641 0 1 1 222468899999
Q ss_pred EcCCCCCCCCCC
Q psy12810 207 LCTGATWPRDLP 218 (276)
Q Consensus 207 lAtG~~~p~~~~ 218 (276)
+|+|.. |+...
T Consensus 241 ~a~G~~-p~~~~ 251 (320)
T 1trb_A 241 VAIGHS-PNTAI 251 (320)
T ss_dssp ECSCEE-ESCGG
T ss_pred EEeCCC-CChHH
Confidence 999998 76543
No 102
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.37 E-value=5.4e-13 Score=121.37 Aligned_cols=163 Identities=17% Similarity=0.238 Sum_probs=107.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-cC-CC-------------------C-------CCC-HHHH-----
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-GI-PT-------------------M-------KLS-KEVV----- 88 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-~~-~~-------------------~-------~~~-~~~~----- 88 (276)
+|||++||+. |+++|++|+|||++ .+||+|.. ++ |. + ..+ ..+.
T Consensus 13 G~aGl~aA~~-l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~ 90 (450)
T 1ges_A 13 GSGGIASINR-AAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTA 90 (450)
T ss_dssp SHHHHHHHHH-HHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHHHHHHHHHH
Confidence 6999999999 89999999999997 69999842 11 10 0 000 1111
Q ss_pred ------HHHHHHHHhCCCeEEecccc--C-ccc-----------hhhhccCCCCCC------------------------
Q psy12810 89 ------QRRVKLLAAEGIEFKTNINV--G-KDI-----------AAKVTNHTPQSD------------------------ 124 (276)
Q Consensus 89 ------~~~~~~l~~~gv~~~~~~~v--~-~~v-----------~v~iiG~gp~~~------------------------ 124 (276)
..+...+++.|+++..+... + +.+ .+..+|+.|..|
T Consensus 91 ~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs~p~~p~i~g~~~~~~~~~~~~~~~~~~~v 170 (450)
T 1ges_A 91 YIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERV 170 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEETTEEEEEEEEEECCCEEECCCCSTTGGGSBCHHHHHHCSSCCSEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEECCEEEEeCEEEECCCCCCCCCCCCCccceecHHHhhhhhhcCCeE
Confidence 12224456788988776321 0 000 111123221111
Q ss_pred -----CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc-------
Q psy12810 125 -----NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD------- 192 (276)
Q Consensus 125 -----g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~------- 192 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+..-
T Consensus 171 vViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------~--~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~ 241 (450)
T 1ges_A 171 AVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-------P--SFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS 241 (450)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------T--TSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSC
T ss_pred EEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-------h--hhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE
Confidence 4559999999999999999999988642 1 356777788888899999999999876411
Q ss_pred --cc-hhhhhcccCEEEEcCCCCCCCCC
Q psy12810 193 --IA-AKELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 193 --~~-~~~~~~~~D~vVlAtG~~~p~~~ 217 (276)
+. .+..++++|.||+|+|.+ |+..
T Consensus 242 ~~v~~~~g~~i~~D~vv~a~G~~-p~~~ 268 (450)
T 1ges_A 242 LTLELEDGRSETVDCLIWAIGRE-PAND 268 (450)
T ss_dssp EEEEETTSCEEEESEEEECSCEE-ESCT
T ss_pred EEEEECCCcEEEcCEEEECCCCC-cCCC
Confidence 00 112257899999999998 7764
No 103
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.37 E-value=9.1e-13 Score=114.71 Aligned_cols=162 Identities=16% Similarity=0.116 Sum_probs=108.3
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeecC--------CCCC--CCHHHHHHHHHHHHhCCCeEEeccccCc--
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYGI--------PTMK--LSKEVVQRRVKLLAAEGIEFKTNINVGK-- 110 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~~--------~~~~--~~~~~~~~~~~~l~~~gv~~~~~~~v~~-- 110 (276)
+|||++||+. |+++|++|+|||+++.+||+|.... |.+. .+.++.+++.+.+.+.+++++++..+..
T Consensus 14 G~aGl~aA~~-l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~ 92 (335)
T 2zbw_A 14 GPTGLFAGFY-VGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLE 92 (335)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEE
T ss_pred CHHHHHHHHH-HHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEE
Confidence 6999999999 8999999999999999999885322 2222 1256677777888888888877643310
Q ss_pred --------------cc----hhhhccCC---CCCC---------------------------------CCCCCCcchhhh
Q psy12810 111 --------------DI----AAKVTNHT---PQSD---------------------------------NQTKHCPPLIVN 136 (276)
Q Consensus 111 --------------~v----~v~iiG~g---p~~~---------------------------------g~~Gl~~A~~l~ 136 (276)
.+ .+...|+. |..+ |.+|+++|..|+
T Consensus 93 ~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~ 172 (335)
T 2zbw_A 93 REGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSKAEFQGKRVLIVGGGDSAVDWALNLL 172 (335)
T ss_dssp EETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCGGGGTTCEEEEECSSHHHHHHHHHTT
T ss_pred ECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCchhhcCCCEEEEECCCHHHHHHHHHHH
Confidence 01 11123431 1111 344666777778
Q ss_pred hCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c-------c----chhhhhccc
Q psy12810 137 IVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D-------I----AAKELYEEF 202 (276)
Q Consensus 137 ~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~-------~----~~~~~~~~~ 202 (276)
+.|.+|+++++.+.+. ...+....+.+.+++.||++++++.+.. + . +++..++++
T Consensus 173 ~~g~~V~~v~~~~~~~-----------~~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~ 241 (335)
T 2zbw_A 173 DTARRITLIHRRPQFR-----------AHEASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEV 241 (335)
T ss_dssp TTSSEEEEECSSSSCC-----------SCHHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEEC
T ss_pred hhCCEEEEEEcCCccC-----------ccHHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEec
Confidence 8888888888877531 2244556667777888999999876531 1 1 122246889
Q ss_pred CEEEEcCCCCCCCCC
Q psy12810 203 DALLLCTGATWPRDL 217 (276)
Q Consensus 203 D~vVlAtG~~~p~~~ 217 (276)
|.||+|+|.. |+..
T Consensus 242 D~vi~a~G~~-p~~~ 255 (335)
T 2zbw_A 242 DAVLILAGYI-TKLG 255 (335)
T ss_dssp SEEEECCCEE-EECG
T ss_pred CEEEEeecCC-CCch
Confidence 9999999998 7653
No 104
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.37 E-value=8.4e-13 Score=131.15 Aligned_cols=66 Identities=26% Similarity=0.422 Sum_probs=61.2
Q ss_pred ccchhchHHHHHhhCCC-eEEEeccCCCCCceeeecCCCCCCCHHHHHHHHHHHHhCCCeEEeccccC
Q psy12810 43 FTATLSYHISIQHLVGH-SVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVG 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~-~V~l~Ek~~~lGG~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 109 (276)
+||||+||.. |+++|| +|+|||+.+.+||++.+++|.++.+.+.+++..+++++.||++++++.++
T Consensus 196 GpAGl~aA~~-L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 262 (1025)
T 1gte_A 196 GPASISCASF-LARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLS 262 (1025)
T ss_dssp SHHHHHHHHH-HHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBS
T ss_pred cHHHHHHHHH-HHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEec
Confidence 6999999999 899999 79999999899999999999999999999999999999999999987653
No 105
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.37 E-value=3e-13 Score=124.10 Aligned_cols=164 Identities=16% Similarity=0.139 Sum_probs=108.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-------------------------cCC----CCCCCH--------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-------------------------GIP----TMKLSK-------- 85 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-------------------------~~~----~~~~~~-------- 85 (276)
+||||+||+. |+++|++|+|+|| +.+||+|.. ++. .+++..
T Consensus 35 G~aGl~aA~~-la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 112 (484)
T 3o0h_A 35 GSGGVRAARL-AGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEKLVAAKNKE 112 (484)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHHHHHHHHH
Confidence 6999999999 8999999999999 579998842 211 111110
Q ss_pred --HHHHHHHHHHHhCCCeEEecccc------------Cc----cchhhhccCCCC-CC----------------------
Q psy12810 86 --EVVQRRVKLLAAEGIEFKTNINV------------GK----DIAAKVTNHTPQ-SD---------------------- 124 (276)
Q Consensus 86 --~~~~~~~~~l~~~gv~~~~~~~v------------~~----~v~v~iiG~gp~-~~---------------------- 124 (276)
.+..++...+.+.++++..+... +. +..+..+|+.|. .+
T Consensus 113 ~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~~~~~~~~~~ 192 (484)
T 3o0h_A 113 ISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNSAIKGSDLCLTSNEIFDLEKLPK 192 (484)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGGGSBCTTTGGGCSSCCS
T ss_pred HHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCccccccHHHHHhHHhcCC
Confidence 12233345667788888765210 00 011111233222 11
Q ss_pred -------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc-----
Q psy12810 125 -------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD----- 192 (276)
Q Consensus 125 -------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~----- 192 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+..-
T Consensus 193 ~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------~--~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~ 263 (484)
T 3o0h_A 193 SIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-------R--NFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTEN 263 (484)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------T--TSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-------c--ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC
Confidence 3348889999999999999999988642 1 356777788888899999999998876411
Q ss_pred ---c-chhhhhcccCEEEEcCCCCCCCCCC
Q psy12810 193 ---I-AAKELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 193 ---~-~~~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
+ ..+..++++|.||+|+|.+ |+...
T Consensus 264 ~v~v~~~~g~~i~aD~Vi~A~G~~-p~~~~ 292 (484)
T 3o0h_A 264 CYNVVLTNGQTICADRVMLATGRV-PNTTG 292 (484)
T ss_dssp SEEEEETTSCEEEESEEEECCCEE-ECCTT
T ss_pred EEEEEECCCcEEEcCEEEEeeCCC-cCCCC
Confidence 1 1122368899999999998 76653
No 106
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.37 E-value=3.5e-13 Score=123.01 Aligned_cols=164 Identities=18% Similarity=0.150 Sum_probs=108.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-------------------------cC----CCCCCCH--------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-------------------------GI----PTMKLSK-------- 85 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-------------------------~~----~~~~~~~-------- 85 (276)
+||||+||+. |+++|++|+|+|| +.+||+|.. ++ +.++++.
T Consensus 14 G~aGl~aA~~-la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 91 (463)
T 4dna_A 14 GSGGVRSGRL-AAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAKLVAAKEQE 91 (463)
T ss_dssp SHHHHHHHHH-HHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHHHHHHHHHH
Confidence 6999999999 8999999999999 679998742 11 1111110
Q ss_pred --HHHHHHHHHHHhCCCeEEecccc------------Cc----cchhhhccCCCC-CC----------------------
Q psy12810 86 --EVVQRRVKLLAAEGIEFKTNINV------------GK----DIAAKVTNHTPQ-SD---------------------- 124 (276)
Q Consensus 86 --~~~~~~~~~l~~~gv~~~~~~~v------------~~----~v~v~iiG~gp~-~~---------------------- 124 (276)
.+..++...+++.|+++..+... +. +..+..+|+.|. .+
T Consensus 92 ~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~~~~~~~~~~ 171 (463)
T 4dna_A 92 IARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSNEAFDLPALPE 171 (463)
T ss_dssp HHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGGGCBCHHHHTTCSSCCS
T ss_pred HHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCccccccHHHHhhhhcCCC
Confidence 11223345566678888766310 00 001112343333 21
Q ss_pred -------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c--
Q psy12810 125 -------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D-- 192 (276)
Q Consensus 125 -------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~-- 192 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.|+++++++.+.. +
T Consensus 172 ~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l---~------~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~ 242 (463)
T 4dna_A 172 SILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL---S------RFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADAD 242 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---T------TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT
T ss_pred eEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc---c------ccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC
Confidence 4458889999999999999999988642 1 35677888888889999999999887641 0
Q ss_pred ----cc-hhhhhcccCEEEEcCCCCCCCCCC
Q psy12810 193 ----IA-AKELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 193 ----~~-~~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
+. .+..++++|.||+|+|.+ |+...
T Consensus 243 ~~~~v~~~~~g~i~aD~Vv~a~G~~-p~~~~ 272 (463)
T 4dna_A 243 GRRVATTMKHGEIVADQVMLALGRM-PNTNG 272 (463)
T ss_dssp SCEEEEESSSCEEEESEEEECSCEE-ESCTT
T ss_pred CEEEEEEcCCCeEEeCEEEEeeCcc-cCCCC
Confidence 11 111127899999999998 77654
No 107
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.37 E-value=2e-12 Score=119.14 Aligned_cols=163 Identities=15% Similarity=0.211 Sum_probs=109.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-------------------------cCC---CCCCCH---------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-------------------------GIP---TMKLSK--------- 85 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-------------------------~~~---~~~~~~--------- 85 (276)
+|||++||.. |+++|++|+|||++ .+||+|.+ ++. .++++.
T Consensus 11 G~aGl~aA~~-l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 1onf_A 11 GSGGMAAARR-AARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLLVERRDKYI 88 (500)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHHHHHHHHHH
Confidence 6999999999 89999999999998 49999843 111 111111
Q ss_pred -HHHHHHHHHHHhCCCeEEecccc------------------------Cccc----hhhhccCCCCCC------------
Q psy12810 86 -EVVQRRVKLLAAEGIEFKTNINV------------------------GKDI----AAKVTNHTPQSD------------ 124 (276)
Q Consensus 86 -~~~~~~~~~l~~~gv~~~~~~~v------------------------~~~v----~v~iiG~gp~~~------------ 124 (276)
.+...+...+++.||+++.+... +..+ .+..+|+.|..|
T Consensus 89 ~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~i~G~~~~~~~~ 168 (500)
T 1onf_A 89 QRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKGIENTISSD 168 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCBCCCSCTTGGGCEEHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCCCCCCCcccCHH
Confidence 11122334566789998876421 0001 111234433221
Q ss_pred ----------------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeee
Q psy12810 125 ----------------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 188 (276)
Q Consensus 125 ----------------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~ 188 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.||++++++.
T Consensus 169 ~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l---~------~~d~~~~~~l~~~l~~~gv~i~~~~~ 239 (500)
T 1onf_A 169 EFFNIKESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL---R------KFDESVINVLENDMKKNNINIVTFAD 239 (500)
T ss_dssp HHTTCCCCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC---T------TSCHHHHHHHHHHHHHTTCEEECSCC
T ss_pred HHhccCCCCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC---c------ccchhhHHHHHHHHHhCCCEEEECCE
Confidence 5668899999999999999999988742 1 35677888888899999999999987
Q ss_pred eccc---------cc-hhhhh-cccCEEEEcCCCCCCCCC
Q psy12810 189 VGKD---------IA-AKELY-EEFDALLLCTGATWPRDL 217 (276)
Q Consensus 189 v~~~---------~~-~~~~~-~~~D~vVlAtG~~~p~~~ 217 (276)
+..- +. .+..+ +++|.||+|+|.. |+..
T Consensus 240 v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~-p~~~ 278 (500)
T 1onf_A 240 VVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRS-PDTE 278 (500)
T ss_dssp EEEEEESSTTCEEEEETTSCEEEEESEEEECCCBC-CTTT
T ss_pred EEEEEEcCCceEEEEECCCcEEEECCEEEECCCCC-cCCC
Confidence 6411 00 11123 7899999999998 8764
No 108
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.37 E-value=1.5e-13 Score=126.19 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=92.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-------------------------cCCC--CCCc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-------------------------GIPT--MKLS 165 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-------------------------~~~~--~~~~ 165 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+ +.+||.+.+ +++. ...+
T Consensus 28 DVvVIGgG~a-----Gl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 101 (484)
T 3o0h_A 28 DLFVIGSGSG-----GVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFN 101 (484)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEEC
T ss_pred CEEEECcCHH-----HHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccC
Confidence 4445999999 99999999999999999999 566764321 1110 0011
Q ss_pred -H-----------HHHHHHHHHHHhcCcEEEeeeeeccc-----cchhhhhcccCEEEEcCCCCCCC-CCCCCCcCCCCe
Q psy12810 166 -K-----------EVVQRRVKLLAAEGIEFKTNINVGKD-----IAAKELYEEFDALLLCTGATWPR-DLPIPGRQLSGI 227 (276)
Q Consensus 166 -~-----------~~~~~~~~~l~~~gv~i~~~~~v~~~-----~~~~~~~~~~D~vVlAtG~~~p~-~~~i~g~~~~gv 227 (276)
. .+...+...+.+.+++++.+.....+ ...+...+.||.+|+|||+. |. .|++||.+. +
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~-p~~~p~i~G~~~--~ 178 (484)
T 3o0h_A 102 WEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAK-IVSNSAIKGSDL--C 178 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEE-ECCC--CBTGGG--S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCC-cccCCCCCCccc--c
Confidence 1 12223344566779999888543211 11133467899999999998 88 888888652 3
Q ss_pred eehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 228 YFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 228 ~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
+++.+++.. ...+++++|||+|++|+|+|..+.+
T Consensus 179 ~~~~~~~~~--------------~~~~~~v~ViGgG~~g~e~A~~l~~ 212 (484)
T 3o0h_A 179 LTSNEIFDL--------------EKLPKSIVIVGGGYIGVEFANIFHG 212 (484)
T ss_dssp BCTTTGGGC--------------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred ccHHHHHhH--------------HhcCCcEEEECcCHHHHHHHHHHHH
Confidence 333332211 1458899999999999999988765
No 109
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.37 E-value=6.6e-13 Score=121.49 Aligned_cols=166 Identities=20% Similarity=0.268 Sum_probs=110.9
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-cC-CCC---------------------------CCC-HHHHH---
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-GI-PTM---------------------------KLS-KEVVQ--- 89 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-~~-~~~---------------------------~~~-~~~~~--- 89 (276)
+|||++||.. |+++|++|+|+|+++.+||+|.. ++ |.. ..+ ..+..
T Consensus 15 G~aGl~aA~~-l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 93 (474)
T 1zmd_A 15 GPGGYVAAIK-AAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQKS 93 (474)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECHHHHHHHHH
T ss_pred CHHHHHHHHH-HHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCHHHHHHHHH
Confidence 6999999999 89999999999999889998742 21 100 001 11111
Q ss_pred --------HHHHHHHhCCCeEEecccc--------------C-ccch----hhhccCCCCCC------------------
Q psy12810 90 --------RRVKLLAAEGIEFKTNINV--------------G-KDIA----AKVTNHTPQSD------------------ 124 (276)
Q Consensus 90 --------~~~~~l~~~gv~~~~~~~v--------------~-~~v~----v~iiG~gp~~~------------------ 124 (276)
.....+++.||+++.+... + ..+. +..+|+.|..+
T Consensus 94 ~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~~~~v~t~~~~~~ 173 (474)
T 1zmd_A 94 TAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALS 173 (474)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCCSSSEECHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCCcCcEEcHHHHhh
Confidence 1235567789988776421 0 0011 11123322111
Q ss_pred -------------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc
Q psy12810 125 -------------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK 191 (276)
Q Consensus 125 -------------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 191 (276)
|++|+++|..|++.|.+|+++++.+.+. + ...++++...+.+.+++.||++++++.+..
T Consensus 174 ~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---~-----~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 245 (474)
T 1zmd_A 174 LKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG---G-----VGIDMEISKNFQRILQKQGFKFKLNTKVTG 245 (474)
T ss_dssp CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---C-----SSCCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred ccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC---C-----cccCHHHHHHHHHHHHHCCCEEEeCceEEE
Confidence 5668999999999999999999988742 1 024677778888889999999999987641
Q ss_pred ---c----c--------chhhhhcccCEEEEcCCCCCCCCCC
Q psy12810 192 ---D----I--------AAKELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 192 ---~----~--------~~~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
+ . .++..++++|.||+|+|.+ |+...
T Consensus 246 i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~-p~~~~ 286 (474)
T 1zmd_A 246 ATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRR-PFTKN 286 (474)
T ss_dssp EEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEE-ECCTT
T ss_pred EEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCC-cCCCc
Confidence 0 1 1223457899999999998 77643
No 110
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.37 E-value=9.7e-14 Score=127.68 Aligned_cols=143 Identities=14% Similarity=0.095 Sum_probs=89.7
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeee-------------------------ecCCCC--CCc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQ-------------------------YGIPTM--KLS 165 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~-------------------------~~~~~~--~~~ 165 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+++ +||.+. ++++.. ..+
T Consensus 10 DvvVIGgG~a-----Gl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 83 (492)
T 3ic9_A 10 DVAIIGTGTA-----GMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVN 83 (492)
T ss_dssp EEEEECCSHH-----HHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEEC
T ss_pred CEEEECCCHH-----HHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccC
Confidence 4445999999 9999999999999999999975 666431 111100 011
Q ss_pred -HHHHHHHH-----------HHHHhc-CcEEEeeeeec---cccc-hhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCee
Q psy12810 166 -KEVVQRRV-----------KLLAAE-GIEFKTNINVG---KDIA-AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIY 228 (276)
Q Consensus 166 -~~~~~~~~-----------~~l~~~-gv~i~~~~~v~---~~~~-~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~ 228 (276)
.++..+.. ..+... +++++.+.... ..+. .+...+.||+||+|||++ |..|++++....+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs~-p~~p~~~~~~~~~v~ 162 (492)
T 3ic9_A 84 GKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSR-PNYPEFLAAAGSRLL 162 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCEE-CCCCHHHHTTGGGEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCCC-CcCCCCCCccCCcEE
Confidence 22222211 112222 33333332111 0011 123468899999999998 888876665445666
Q ss_pred ehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 229 FAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
++.+++.. ...+++++|||||++|+|+|..+.++
T Consensus 163 t~~~~~~~--------------~~~~k~vvViGgG~ig~E~A~~l~~~ 196 (492)
T 3ic9_A 163 TNDNLFEL--------------NDLPKSVAVFGPGVIGLELGQALSRL 196 (492)
T ss_dssp CHHHHTTC--------------SSCCSEEEEESSCHHHHHHHHHHHHT
T ss_pred cHHHHhhh--------------hhcCCeEEEECCCHHHHHHHHHHHHc
Confidence 65443321 14589999999999999999988753
No 111
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.36 E-value=1.1e-12 Score=120.00 Aligned_cols=84 Identities=21% Similarity=0.300 Sum_probs=64.6
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc----------cc
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD----------IA 194 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~----------~~ 194 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+..- ..
T Consensus 189 G~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------~--~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~ 259 (476)
T 3lad_A 189 GVIGLELGSVWARLGAEVTVLEAMDKFL-------P--AVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFV 259 (476)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSSSSS-------T--TSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEE
T ss_pred CHHHHHHHHHHHHcCCcEEEEecCCCcC-------c--ccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEE
Confidence 4568999999999999999999988642 1 356778888888899999999999876410 11
Q ss_pred --hhhhhcccCEEEEcCCCCCCCCCC
Q psy12810 195 --AKELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 195 --~~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
+...++++|.||+|+|.. |+...
T Consensus 260 ~~~g~~~~~~D~vi~a~G~~-p~~~~ 284 (476)
T 3lad_A 260 DAEGEKSQAFDKLIVAVGRR-PVTTD 284 (476)
T ss_dssp SSSEEEEEEESEEEECSCEE-ECCTT
T ss_pred eCCCcEEEECCEEEEeeCCc-ccCCC
Confidence 111467899999999998 77643
No 112
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.36 E-value=6.7e-13 Score=115.38 Aligned_cols=158 Identities=18% Similarity=0.137 Sum_probs=105.6
Q ss_pred ccchhchHHHHHhhCCCeEEEecc----CCCCCceeeec-----CCCCCC---CHHHHHHHHHHHHhCCCeEEecccc--
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFER----NDRVGGLLQYG-----IPTMKL---SKEVVQRRVKLLAAEGIEFKTNINV-- 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek----~~~lGG~~~~~-----~~~~~~---~~~~~~~~~~~l~~~gv~~~~~~~v-- 108 (276)
+||||+||+. |+++|++|+|||+ +..+||.+.+. .|.+.. ..++..++.+.+.+.|++++.++..
T Consensus 31 G~aGl~aA~~-l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~v~~i 109 (338)
T 3itj_A 31 GPAAHTAAIY-LARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKV 109 (338)
T ss_dssp SHHHHHHHHH-HHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECSCEEEE
T ss_pred CHHHHHHHHH-HHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEEEEeEEEEE
Confidence 6999999999 8999999999999 44799988653 233332 3677888888899999998766410
Q ss_pred ---C-------------c----cchhhhccCCCCCC------------------------------------CCCCCCcc
Q psy12810 109 ---G-------------K----DIAAKVTNHTPQSD------------------------------------NQTKHCPP 132 (276)
Q Consensus 109 ---~-------------~----~v~v~iiG~gp~~~------------------------------------g~~Gl~~A 132 (276)
. . +..+...|+.|..+ |.+|+++|
T Consensus 110 ~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a 189 (338)
T 3itj_A 110 DLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEA 189 (338)
T ss_dssp ECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHH
T ss_pred EEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHH
Confidence 0 0 00000112211100 33478888
Q ss_pred hhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhc-CcEEEeeeeecc---c------c------chh
Q psy12810 133 LIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAE-GIEFKTNINVGK---D------I------AAK 196 (276)
Q Consensus 133 ~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~-gv~i~~~~~v~~---~------~------~~~ 196 (276)
..|++.|.+|+++++.+.+. ... .+.+.+.+. ||++++++.+.. + + +++
T Consensus 190 ~~l~~~g~~v~~v~~~~~~~-----------~~~----~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~ 254 (338)
T 3itj_A 190 QFLTKYGSKVFMLVRKDHLR-----------AST----IMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNE 254 (338)
T ss_dssp HHHTTTSSEEEEECSSSSCC-----------SCH----HHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTE
T ss_pred HHHHhcCCEEEEEEcCCccC-----------CCH----HHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCc
Confidence 88899999999999887642 122 344455555 999999887641 0 1 112
Q ss_pred hhhcccCEEEEcCCCCCCCCC
Q psy12810 197 ELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 197 ~~~~~~D~vVlAtG~~~p~~~ 217 (276)
..++++|.||+|+|.. |+..
T Consensus 255 ~~~i~~D~vi~a~G~~-p~~~ 274 (338)
T 3itj_A 255 ETDLPVSGLFYAIGHT-PATK 274 (338)
T ss_dssp EEEEECSEEEECSCEE-ECCG
T ss_pred eEEEEeCEEEEEeCCC-CChh
Confidence 3468899999999998 7654
No 113
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.36 E-value=2.2e-12 Score=117.41 Aligned_cols=164 Identities=19% Similarity=0.192 Sum_probs=108.7
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-c------------------------CC--CCCCC-HHHH------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-G------------------------IP--TMKLS-KEVV------ 88 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-~------------------------~~--~~~~~-~~~~------ 88 (276)
+|||++||.. |++.|++|+|+|++ .+||+|.. + ++ ....+ ..+.
T Consensus 12 G~aGl~aA~~-l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 89 (455)
T 1ebd_A 12 GPGGYVAAIR-AAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAKVQEWKASV 89 (455)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHHHHHHHHHH
Confidence 6999999999 89999999999998 79998732 1 11 00011 1111
Q ss_pred -----HHHHHHHHhCCCeEEecccc-------------C-ccc----hhhhccCCCCCC---------------------
Q psy12810 89 -----QRRVKLLAAEGIEFKTNINV-------------G-KDI----AAKVTNHTPQSD--------------------- 124 (276)
Q Consensus 89 -----~~~~~~l~~~gv~~~~~~~v-------------~-~~v----~v~iiG~gp~~~--------------------- 124 (276)
+.....+++.|++++.++.+ + ..+ .+..+|+.|..+
T Consensus 90 ~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g~~~~v~~~~~~~~~~~~ 169 (455)
T 1ebd_A 90 VKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNRILDSTGALNLGEV 169 (455)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBCCCSSEECHHHHHTCSSC
T ss_pred HHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCCccceEecHHHHhccccC
Confidence 12235566778888766421 0 001 111123221110
Q ss_pred ---------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc---
Q psy12810 125 ---------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD--- 192 (276)
Q Consensus 125 ---------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~--- 192 (276)
|++|+++|..|++.|.+|+++++.+.+. | ..++++...+.+.+++.||++++++.+..-
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------~--~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~ 240 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-------S--GFEKQMAAIIKKRLKKKGVEVVTNALAKGAEER 240 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------T--TSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------c--ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEe
Confidence 4569999999999999999999988642 1 356777788888899999999999876410
Q ss_pred -----cc----hhhhhcccCEEEEcCCCCCCCCCC
Q psy12810 193 -----IA----AKELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 193 -----~~----~~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
.. ++..++++|.||+|+|.+ |+...
T Consensus 241 ~~~~~v~~~~~g~~~~~~~D~vv~a~G~~-p~~~~ 274 (455)
T 1ebd_A 241 EDGVTVTYEANGETKTIDADYVLVTVGRR-PNTDE 274 (455)
T ss_dssp TTEEEEEEEETTEEEEEEESEEEECSCEE-ESCSS
T ss_pred CCeEEEEEEeCCceeEEEcCEEEECcCCC-cccCc
Confidence 01 123467899999999998 77543
No 114
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.36 E-value=1.2e-12 Score=120.24 Aligned_cols=83 Identities=17% Similarity=0.186 Sum_probs=62.2
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc---------c--
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD---------I-- 193 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~---------~-- 193 (276)
|++|+++|..|++.|.+|+++++... + + ..++++...+.+.+++.||++++++.+..- +
T Consensus 194 G~ig~E~A~~l~~~g~~Vtlv~~~~~----l----~--~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~ 263 (488)
T 3dgz_A 194 SYVALECAGFLTGIGLDTTVMMRSIP----L----R--GFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTW 263 (488)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEESSCS----S----T--TSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEE
T ss_pred CHHHHHHHHHHHHcCCceEEEEcCcc----c----c--cCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEE
Confidence 45699999999999999999998642 1 1 357788888888999999999998765310 0
Q ss_pred -c---hhhhhcccCEEEEcCCCCCCCCCC
Q psy12810 194 -A---AKELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 194 -~---~~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
. ++..++++|.||+|+|.. |+...
T Consensus 264 ~~~~~g~~~~~~~D~vi~a~G~~-p~~~~ 291 (488)
T 3dgz_A 264 EDHASGKEDTGTFDTVLWAIGRV-PETRT 291 (488)
T ss_dssp EETTTTEEEEEEESEEEECSCEE-ESCGG
T ss_pred EeCCCCeeEEEECCEEEEcccCC-cccCc
Confidence 0 112247899999999998 76643
No 115
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.35 E-value=3.3e-13 Score=126.97 Aligned_cols=186 Identities=14% Similarity=0.186 Sum_probs=115.5
Q ss_pred cceeeccccchhccccccccccc---ccchhchHHHHHhhCCCeEEEeccC-C-------CCCceeee-c----------
Q psy12810 20 EPVLSGKVPRIDLEYTINNECRA---FTATLSYHISIQHLVGHSVTVFERN-D-------RVGGLLQY-G---------- 77 (276)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~---~paGl~aA~~~aa~~G~~V~l~Ek~-~-------~lGG~~~~-~---------- 77 (276)
.++++|+|+++..+.....++-. +||||+||.. |+++|++|+|||+. + .+||+|.. +
T Consensus 90 ~~~~~g~L~~~l~~~~~~~dvvVIG~GpAGl~aA~~-l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~ 168 (598)
T 2x8g_A 90 KYYSNDELAGIVNESKYDYDLIVIGGGSGGLAAGKE-AAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQA 168 (598)
T ss_dssp HHHHTTCHHHHHHCCSSSEEEEEECCSHHHHHHHHH-HHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHH
T ss_pred hhhhcCcchhhcccccccccEEEECCCccHHHHHHH-HHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHH
Confidence 67889999999976533333333 6999999999 89999999999973 2 48998632 1
Q ss_pred --------------C--CC--CCCC-HHHHHHH-----------HHHHHhCCCeEEeccc---------c----C-----
Q psy12810 78 --------------I--PT--MKLS-KEVVQRR-----------VKLLAAEGIEFKTNIN---------V----G----- 109 (276)
Q Consensus 78 --------------~--~~--~~~~-~~~~~~~-----------~~~l~~~gv~~~~~~~---------v----~----- 109 (276)
+ +. .... ..+.++. ...+.+.+|++..+.. + +
T Consensus 169 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~ 248 (598)
T 2x8g_A 169 GLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTI 248 (598)
T ss_dssp HHHHHHHHHHHHTTCCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEE
T ss_pred HHHHHHHhhHHhCCccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEE
Confidence 1 11 1111 2222221 1235567877653210 0 0
Q ss_pred -ccchhhhccCCCCCC------------------------------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeec
Q psy12810 110 -KDIAAKVTNHTPQSD------------------------------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG 158 (276)
Q Consensus 110 -~~v~v~iiG~gp~~~------------------------------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~ 158 (276)
-+..+..+|+.|..+ |.+|+++|..|++.|.+||++++. .+ ++
T Consensus 249 ~~d~lviAtGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~---l~-- 322 (598)
T 2x8g_A 249 TGNKIILATGERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-IL---LR-- 322 (598)
T ss_dssp EEEEEEECCCEEECCCSSTTHHHHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CS---ST--
T ss_pred EeCEEEEeCCCCCCCCCCCCcccceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cC---cC--
Confidence 011111123322111 445999999999999999999986 22 11
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---------c--------c-----chhhhhcccCEEEEcCCCCCCCC
Q psy12810 159 IPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---------D--------I-----AAKELYEEFDALLLCTGATWPRD 216 (276)
Q Consensus 159 ~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---------~--------~-----~~~~~~~~~D~vVlAtG~~~p~~ 216 (276)
..++++...+.+.+++.||++++++.+.. . . ++++..+++|.||+|+|.. |+.
T Consensus 323 ----~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~-p~~ 397 (598)
T 2x8g_A 323 ----GFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGRE-PQL 397 (598)
T ss_dssp ----TSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEE-ECG
T ss_pred ----cCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCc-ccc
Confidence 35677777788888999999998864321 0 0 1111234599999999998 765
Q ss_pred C
Q psy12810 217 L 217 (276)
Q Consensus 217 ~ 217 (276)
.
T Consensus 398 ~ 398 (598)
T 2x8g_A 398 S 398 (598)
T ss_dssp G
T ss_pred C
Confidence 3
No 116
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.34 E-value=1.3e-12 Score=120.15 Aligned_cols=82 Identities=20% Similarity=0.188 Sum_probs=62.9
Q ss_pred CCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------c----
Q psy12810 126 QTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD--------I---- 193 (276)
Q Consensus 126 ~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~---- 193 (276)
++|+++|..|++.|.+|+++++.+++. + ..++++...+.+.+++. |++++++.+..- .
T Consensus 184 ~ig~E~A~~l~~~g~~Vtlv~~~~~~l---~------~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~ 253 (492)
T 3ic9_A 184 VIGLELGQALSRLGVIVKVFGRSGSVA---N------LQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFD 253 (492)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTCCT---T------CCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEEC
T ss_pred HHHHHHHHHHHHcCCeEEEEEECCccc---c------cCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEe
Confidence 349999999999999999999998752 1 35677777888888877 999998876410 1
Q ss_pred -chhhhhcccCEEEEcCCCCCCCCCC
Q psy12810 194 -AAKELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 194 -~~~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
+++..++++|.||+|+|.. |+...
T Consensus 254 ~~G~~~~i~~D~Vi~a~G~~-p~~~~ 278 (492)
T 3ic9_A 254 KSGQKTTESFQYVLAATGRK-ANVDK 278 (492)
T ss_dssp TTCCEEEEEESEEEECSCCE-ESCSS
T ss_pred CCCceEEEECCEEEEeeCCc-cCCCC
Confidence 1222568899999999998 77654
No 117
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.33 E-value=2.4e-13 Score=121.31 Aligned_cols=161 Identities=11% Similarity=-0.047 Sum_probs=110.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCce-e--eecCCCCCCCHHHHHHHHHHHHhCCCeEEeccccC----------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGL-L--QYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVG---------- 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~-~--~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---------- 109 (276)
+|||++||.. ++..|++|+|||+++.++.. + ....+....+.++..+..+.+++.||++++++++.
T Consensus 18 G~AGl~aA~~-L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~ 96 (385)
T 3klj_A 18 GPAGFSAAKA-ALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVT 96 (385)
T ss_dssp SHHHHHHHHH-HTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEE
T ss_pred cHHHHHHHHH-HhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEE
Confidence 6999999999 78899999999999877631 1 11111222223333334466778899998875330
Q ss_pred ----cc----chhhhccCCCCCC-----------------------------------CCCCCCcchhhhhCCcEEEEEc
Q psy12810 110 ----KD----IAAKVTNHTPQSD-----------------------------------NQTKHCPPLIVNIVGHSVTVFE 146 (276)
Q Consensus 110 ----~~----v~v~iiG~gp~~~-----------------------------------g~~Gl~~A~~l~~~G~~Vtvie 146 (276)
.. ..+..+|+.|..+ |++|+++|..|++.|.+||+++
T Consensus 97 ~~~g~~~~yd~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~ 176 (385)
T 3klj_A 97 LKSGEKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGI 176 (385)
T ss_dssp ETTSCEEECSEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEEC
T ss_pred ECCCCEEECCEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 00 1111233322111 5569999999999999999999
Q ss_pred CCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccccchhhhhcccCEEEEcCCCCCCCCC
Q psy12810 147 RNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 147 ~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~~~~~~~~~D~vVlAtG~~~p~~~ 217 (276)
+.+.+. . ...++++...+.+.+++.||++++++.+..- ..++++|.||+|+|.. |+..
T Consensus 177 ~~~~~l---~-----~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i----g~~~~~D~vv~a~G~~-p~~~ 234 (385)
T 3klj_A 177 ILEYPL---E-----RQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM----GDLIRSSCVITAVGVK-PNLD 234 (385)
T ss_dssp SSSSSC---T-----TTSCHHHHHHHHHHHHTTTCEEECSCCGGGC----HHHHHHSEEEECCCEE-ECCG
T ss_pred cCCccc---h-----hhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc----CeEEecCeEEECcCcc-cChh
Confidence 988742 1 1256777778888899999999999887532 3467899999999998 7653
No 118
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.33 E-value=3.3e-12 Score=117.15 Aligned_cols=82 Identities=15% Similarity=0.095 Sum_probs=61.8
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc---------c--
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD---------I-- 193 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~---------~-- 193 (276)
|++|+++|..|++.|.+|+++++... ++ ..++++...+.+.+++.||++++++.+..- +
T Consensus 196 G~~g~E~A~~l~~~g~~Vtlv~~~~~----l~------~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~ 265 (483)
T 3dgh_A 196 GYIGLECAGFLKGLGYEPTVMVRSIV----LR------GFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKY 265 (483)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSCS----ST------TSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEE
T ss_pred CHHHHHHHHHHHHcCCEEEEEeCCCC----Cc------ccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEE
Confidence 45599999999999999999987432 11 357788888888899999999999876410 0
Q ss_pred -c---hhhhhcccCEEEEcCCCCCCCCC
Q psy12810 194 -A---AKELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 194 -~---~~~~~~~~D~vVlAtG~~~p~~~ 217 (276)
+ ++..++++|.||+|+|.. |+..
T Consensus 266 ~~~~~~~~~~~~~D~vi~a~G~~-p~~~ 292 (483)
T 3dgh_A 266 KNVETGEESEDVYDTVLWAIGRK-GLVD 292 (483)
T ss_dssp EETTTCCEEEEEESEEEECSCEE-ECCG
T ss_pred ecCCCCceeEEEcCEEEECcccc-cCcC
Confidence 0 112257899999999998 7654
No 119
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.33 E-value=9.3e-13 Score=120.31 Aligned_cols=165 Identities=18% Similarity=0.241 Sum_probs=109.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-cC-CCC--------------------------CCC-HHHH-----
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-GI-PTM--------------------------KLS-KEVV----- 88 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-~~-~~~--------------------------~~~-~~~~----- 88 (276)
+|||++||+. |+++|++|+|+|+++.+||+|.. ++ |.. ..+ ..+.
T Consensus 15 G~aGl~aA~~-l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 93 (470)
T 1dxl_A 15 GPGGYVAAIK-AAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLAAMMGQKDK 93 (470)
T ss_dssp SHHHHHHHHH-HHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHHHHHHHHHH
Confidence 6999999999 89999999999999889998742 11 100 001 1111
Q ss_pred ------HHHHHHHHhCCCeEEecccc-------------C--ccch----hhhccCCCCCC-------------------
Q psy12810 89 ------QRRVKLLAAEGIEFKTNINV-------------G--KDIA----AKVTNHTPQSD------------------- 124 (276)
Q Consensus 89 ------~~~~~~l~~~gv~~~~~~~v-------------~--~~v~----v~iiG~gp~~~------------------- 124 (276)
......+++.|++++.++.+ + ..+. +...|+.|..+
T Consensus 94 ~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~~~~v~~~~~~~~~ 173 (470)
T 1dxl_A 94 AVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGALAL 173 (470)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCCSSSEECHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCcccEEeHHHhhhh
Confidence 11234556678888766421 1 0011 11123211110
Q ss_pred ------------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc-
Q psy12810 125 ------------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK- 191 (276)
Q Consensus 125 ------------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~- 191 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+..
T Consensus 174 ~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------~--~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i 244 (470)
T 1dxl_A 174 SEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV-------P--TMDAEIRKQFQRSLEKQGMKFKLKTKVVGV 244 (470)
T ss_dssp SSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------T--TSCHHHHHHHHHHHHHSSCCEECSEEEEEE
T ss_pred hhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------c--cccHHHHHHHHHHHHHcCCEEEeCCEEEEE
Confidence 4568999999999999999999988642 1 35677888888889999999999987641
Q ss_pred --c-------c----chhhhhcccCEEEEcCCCCCCCCCC
Q psy12810 192 --D-------I----AAKELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 192 --~-------~----~~~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
+ . +++..++++|.||+|+|.+ |+...
T Consensus 245 ~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~-p~~~~ 283 (470)
T 1dxl_A 245 DTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRT-PFTSG 283 (470)
T ss_dssp ECSSSSEEEEEEESSSCCCEEEEESEEECCCCEE-ECCTT
T ss_pred EEcCCeEEEEEEecCCCcceEEECCEEEECCCCC-cCCCC
Confidence 0 0 1112468899999999998 77543
No 120
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.33 E-value=5.2e-13 Score=125.64 Aligned_cols=143 Identities=15% Similarity=0.119 Sum_probs=90.5
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCC-C-------ccceeee-e------------------------cC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERN-D-------RVGGLLQ-Y------------------------GI 159 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~-~-------~~gg~~~-~------------------------~~ 159 (276)
.+.|||+||+ |+.+|..|++.|++|+|||+. + .+||.+. . ++
T Consensus 109 dvvVIG~GpA-----Gl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~ 183 (598)
T 2x8g_A 109 DLIVIGGGSG-----GLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGW 183 (598)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cEEEECCCcc-----HHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCc
Confidence 3445999999 999999999999999999973 2 3555321 0 11
Q ss_pred --CC--CCCc-HHHHHHH-----------HHHHHhcCcEEEeeeee--c---ccc---chhhhhcccCEEEEcCCCCCCC
Q psy12810 160 --PT--MKLS-KEVVQRR-----------VKLLAAEGIEFKTNINV--G---KDI---AAKELYEEFDALLLCTGATWPR 215 (276)
Q Consensus 160 --~~--~~~~-~~~~~~~-----------~~~l~~~gv~i~~~~~v--~---~~~---~~~~~~~~~D~vVlAtG~~~p~ 215 (276)
+. ...+ .++.++. ...+...+|+++.+... . ... +++..++.||+||+|||++ |+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~-p~ 262 (598)
T 2x8g_A 184 SLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGER-PK 262 (598)
T ss_dssp CCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEE-EC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCC-CC
Confidence 11 0111 2222221 12345678988865421 1 011 1112358899999999998 99
Q ss_pred CCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 216 DLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 216 ~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
.|++||.+.. ..++.+++. . ...+++++|||||++|+|+|..+.++
T Consensus 263 ~p~i~G~~~~-~~~~~~~~~------------~--~~~~~~vvViGgG~~g~E~A~~l~~~ 308 (598)
T 2x8g_A 263 YPEIPGAVEY-GITSDDLFS------------L--PYFPGKTLVIGASYVALECAGFLASL 308 (598)
T ss_dssp CCSSTTHHHH-CEEHHHHTT------------C--SSCCCSEEEECCSHHHHHHHHHHHHT
T ss_pred CCCCCCcccc-eEcHHHHhh------------C--ccCCCEEEEECCCHHHHHHHHHHHHc
Confidence 9999886432 233222211 0 14578999999999999999988763
No 121
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.33 E-value=1.2e-12 Score=119.80 Aligned_cols=83 Identities=24% Similarity=0.289 Sum_probs=64.5
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc-c----------
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD-I---------- 193 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~-~---------- 193 (276)
|++|+++|..|++.|.+||++++.+.+. + ..++++...+.+.+++.||++++++.+..- .
T Consensus 192 G~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------~--~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~ 262 (478)
T 1v59_A 192 GIIGLEMGSVYSRLGSKVTVVEFQPQIG-------A--SMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIV 262 (478)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSSSSS-------S--SSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEE
T ss_pred CHHHHHHHHHHHHcCCEEEEEEeCCccc-------c--ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEE
Confidence 5668999999999999999999988752 1 356777788888899999999999776411 0
Q ss_pred -c----hhhhhcccCEEEEcCCCCCCCCC
Q psy12810 194 -A----AKELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 194 -~----~~~~~~~~D~vVlAtG~~~p~~~ 217 (276)
. ++..++++|.||+|+|.+ |+..
T Consensus 263 ~~~~~~g~~~~~~~D~vv~a~G~~-p~~~ 290 (478)
T 1v59_A 263 VEDTKTNKQENLEAEVLLVAVGRR-PYIA 290 (478)
T ss_dssp EEETTTTEEEEEEESEEEECSCEE-ECCT
T ss_pred EEEcCCCCceEEECCEEEECCCCC-cCCC
Confidence 0 122457899999999998 7764
No 122
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.32 E-value=7.3e-13 Score=121.77 Aligned_cols=83 Identities=23% Similarity=0.259 Sum_probs=63.8
Q ss_pred CCCCCCcchhhhhC---CcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc-cc------
Q psy12810 125 NQTKHCPPLIVNIV---GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD-IA------ 194 (276)
Q Consensus 125 g~~Gl~~A~~l~~~---G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~-~~------ 194 (276)
|++|+++|..|++. |.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+..- ..
T Consensus 196 G~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------~--~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~ 266 (490)
T 1fec_A 196 GYISIEFAGIFNAYKARGGQVDLAYRGDMIL-------R--GFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRH 266 (490)
T ss_dssp SHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-------T--TSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEE
T ss_pred CHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-------c--ccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEE
Confidence 45688999999998 99999999988742 1 356778888888899999999999876421 00
Q ss_pred ---hhhhhcccCEEEEcCCCCCCCCC
Q psy12810 195 ---AKELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 195 ---~~~~~~~~D~vVlAtG~~~p~~~ 217 (276)
.+..++++|.||+|+|.+ |+..
T Consensus 267 v~~~~G~~i~~D~vv~a~G~~-p~~~ 291 (490)
T 1fec_A 267 VVFESGAEADYDVVMLAIGRV-PRSQ 291 (490)
T ss_dssp EEETTSCEEEESEEEECSCEE-ESCT
T ss_pred EEECCCcEEEcCEEEEccCCC-cCcc
Confidence 112257899999999998 7764
No 123
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.31 E-value=2.9e-12 Score=117.44 Aligned_cols=82 Identities=15% Similarity=0.150 Sum_probs=63.5
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c-------cc
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D-------IA 194 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~-------~~ 194 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+.. + +.
T Consensus 194 G~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------~--~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~ 264 (479)
T 2hqm_A 194 GYIGIELAGVFHGLGSETHLVIRGETVL-------R--KFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIH 264 (479)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSSSSC-------T--TSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEE
T ss_pred CHHHHHHHHHHHHcCCceEEEEeCCccc-------c--ccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEE
Confidence 4568899999999999999999988742 1 35677888888889999999999987641 1 00
Q ss_pred -hhh-hhcccCEEEEcCCCCCCCC
Q psy12810 195 -AKE-LYEEFDALLLCTGATWPRD 216 (276)
Q Consensus 195 -~~~-~~~~~D~vVlAtG~~~p~~ 216 (276)
.+. .++++|.||+|+|.+ |+.
T Consensus 265 ~~~G~~~i~~D~vv~a~G~~-p~~ 287 (479)
T 2hqm_A 265 MNDSKSIDDVDELIWTIGRK-SHL 287 (479)
T ss_dssp ETTSCEEEEESEEEECSCEE-ECC
T ss_pred ECCCcEEEEcCEEEECCCCC-Ccc
Confidence 112 368899999999998 776
No 124
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.31 E-value=2e-12 Score=119.09 Aligned_cols=84 Identities=18% Similarity=0.109 Sum_probs=64.6
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------c-ch
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD--------I-AA 195 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~-~~ 195 (276)
|++|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+..- + .+
T Consensus 191 G~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------~--~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~ 261 (499)
T 1xdi_A 191 GVTGAEFVDAYTELGVPVTVVASQDHVL-------P--YEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMT 261 (499)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECSSSSSS-------C--CSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEET
T ss_pred CHHHHHHHHHHHHcCCeEEEEEcCCccc-------c--ccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEEC
Confidence 5568889999999999999999988742 1 256778888888899999999999876411 1 11
Q ss_pred hhhhcccCEEEEcCCCCCCCCCC
Q psy12810 196 KELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 196 ~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
+..++++|.||+|+|.+ |+...
T Consensus 262 ~g~~i~aD~Vv~a~G~~-p~~~~ 283 (499)
T 1xdi_A 262 DGRTVEGSHALMTIGSV-PNTSG 283 (499)
T ss_dssp TSCEEEESEEEECCCEE-ECCSS
T ss_pred CCcEEEcCEEEECCCCC-cCCCc
Confidence 23368899999999998 77643
No 125
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.30 E-value=4.5e-13 Score=118.74 Aligned_cols=160 Identities=14% Similarity=0.076 Sum_probs=103.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCc---eeeecCCCCCCCHHHHHHHHHHHHhCCCeEEeccccC----------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGG---LLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVG---------- 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG---~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---------- 109 (276)
+|||++||.. |+++| +|+|+|+++.++- .+...+.....+..+..+..+.+++.|+++++++++.
T Consensus 17 G~AGl~aA~~-l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~id~~~~~V~ 94 (367)
T 1xhc_A 17 GPGGFELAKQ-LSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGRKVVI 94 (367)
T ss_dssp SHHHHHHHHH-HTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEEEETTTTEEE
T ss_pred cHHHHHHHHH-HhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEEEECCCCEEE
Confidence 6999999999 89999 9999999875431 0100111111122222223345567788877764320
Q ss_pred ---c----cchhhhccCCCCCC-----------------------------------CCCCCCcchhhhhCCcEEEEEcC
Q psy12810 110 ---K----DIAAKVTNHTPQSD-----------------------------------NQTKHCPPLIVNIVGHSVTVFER 147 (276)
Q Consensus 110 ---~----~v~v~iiG~gp~~~-----------------------------------g~~Gl~~A~~l~~~G~~Vtvie~ 147 (276)
. +..+..+|+.|..+ |++|+++|..|++.|.+|+++++
T Consensus 95 ~~g~~~~~d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~ 174 (367)
T 1xhc_A 95 TEKGEVPYDTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHR 174 (367)
T ss_dssp ESSCEEECSEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECS
T ss_pred ECCcEEECCEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 0 00111223322111 45699999999999999999999
Q ss_pred CCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc----cc-hhhhhcccCEEEEcCCCCCCCC
Q psy12810 148 NDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD----IA-AKELYEEFDALLLCTGATWPRD 216 (276)
Q Consensus 148 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~----~~-~~~~~~~~D~vVlAtG~~~p~~ 216 (276)
.+.+. +.++++.+.+.+.+++.||++++++.+..- +. .+.. +++|.||+|+|.+ |+.
T Consensus 175 ~~~~l----------~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~D~vi~a~G~~-p~~ 236 (367)
T 1xhc_A 175 GAMFL----------GLDEELSNMIKDMLEETGVKFFLNSELLEANEEGVLTNSGF-IEGKVKICAIGIV-PNV 236 (367)
T ss_dssp SSCCT----------TCCHHHHHHHHHHHHHTTEEEECSCCEEEECSSEEEETTEE-EECSCEEEECCEE-ECC
T ss_pred CCeec----------cCCHHHHHHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE-EEcCEEEECcCCC-cCH
Confidence 88753 146777788888899999999999876421 11 1122 8899999999998 775
No 126
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.30 E-value=3.4e-12 Score=116.43 Aligned_cols=164 Identities=16% Similarity=0.137 Sum_probs=108.9
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-cC-CC-------------------C------CCC-HHH-------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-GI-PT-------------------M------KLS-KEV------- 87 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-~~-~~-------------------~------~~~-~~~------- 87 (276)
+|||++||.. |+++|++|+|+|++ .+||+|.. ++ |. + ..+ ..+
T Consensus 12 G~aGl~aA~~-l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 89 (464)
T 2a8x_A 12 GPGGYVAAIR-AAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIAYDRSRKV 89 (464)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHH
Confidence 6999999999 89999999999998 69998732 11 10 0 001 111
Q ss_pred ----HHHHHHHHHhCCCeEEecccc-------------C--ccch----hhhccCCCCCC--------------------
Q psy12810 88 ----VQRRVKLLAAEGIEFKTNINV-------------G--KDIA----AKVTNHTPQSD-------------------- 124 (276)
Q Consensus 88 ----~~~~~~~l~~~gv~~~~~~~v-------------~--~~v~----v~iiG~gp~~~-------------------- 124 (276)
...+.+.+++.||+++.++.+ + ..+. +...|+.|..+
T Consensus 90 ~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~~~~~~~~~~~~~~~ 169 (464)
T 2a8x_A 90 AEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTYEEQILSRE 169 (464)
T ss_dssp HHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCBTTEECHHHHHTCSS
T ss_pred HHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCceEEecHHHhhccc
Confidence 111235566788988765421 1 0111 11123321110
Q ss_pred ----------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---
Q psy12810 125 ----------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK--- 191 (276)
Q Consensus 125 ----------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~--- 191 (276)
|++|+++|..|++.|.+|+++++.+++. | ..++++...+.+.+++.||++++++.+..
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------~--~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 240 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-------P--NEDADVSKEIEKQFKKLGVTILTATKVESIAD 240 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------T--TSCHHHHHHHHHHHHHHTCEEECSCEEEEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-------c--ccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEE
Confidence 5568999999999999999999988742 1 35677878888889999999999987641
Q ss_pred c-----c----chhhhhcccCEEEEcCCCCCCCCCC
Q psy12810 192 D-----I----AAKELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 192 ~-----~----~~~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
+ . +++..++++|.||+|+|.. |+...
T Consensus 241 ~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~-p~~~~ 275 (464)
T 2a8x_A 241 GGSQVTVTVTKDGVAQELKAEKVLQAIGFA-PNVEG 275 (464)
T ss_dssp CSSCEEEEEESSSCEEEEEESEEEECSCEE-ECCSS
T ss_pred cCCeEEEEEEcCCceEEEEcCEEEECCCCC-ccCCC
Confidence 0 1 1222468899999999998 77643
No 127
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.30 E-value=1.2e-12 Score=120.38 Aligned_cols=83 Identities=25% Similarity=0.241 Sum_probs=63.9
Q ss_pred CCCCCCcchhhhhC---CcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecccc-c------
Q psy12810 125 NQTKHCPPLIVNIV---GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI-A------ 194 (276)
Q Consensus 125 g~~Gl~~A~~l~~~---G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~-~------ 194 (276)
|++|+++|..|++. |.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+..-. .
T Consensus 200 G~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------~--~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~ 270 (495)
T 2wpf_A 200 GFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-------R--GFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKH 270 (495)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-------T--TSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEE
T ss_pred CHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-------c--ccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEE
Confidence 55689999999998 99999999988742 1 3567788888888999999999998764110 0
Q ss_pred ---hhhhhcccCEEEEcCCCCCCCCC
Q psy12810 195 ---AKELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 195 ---~~~~~~~~D~vVlAtG~~~p~~~ 217 (276)
.+..++++|.||+|+|.+ |+..
T Consensus 271 v~~~~G~~i~~D~vv~a~G~~-p~~~ 295 (495)
T 2wpf_A 271 VTFESGKTLDVDVVMMAIGRI-PRTN 295 (495)
T ss_dssp EEETTSCEEEESEEEECSCEE-ECCG
T ss_pred EEECCCcEEEcCEEEECCCCc-cccc
Confidence 112258899999999998 7763
No 128
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.29 E-value=1.5e-12 Score=119.38 Aligned_cols=83 Identities=14% Similarity=0.128 Sum_probs=64.4
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c-----cc-h
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D-----IA-A 195 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~-----~~-~ 195 (276)
|++|+++|..|++.|.+|+++++.+++. + ..++++...+.+.+++.||++++++.+.. + +. .
T Consensus 194 G~ig~E~A~~l~~~G~~Vtlv~~~~~~l-------~--~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~ 264 (482)
T 1ojt_A 194 GIIGLEMGTVYSTLGSRLDVVEMMDGLM-------Q--GADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFE 264 (482)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECSSSSSS-------T--TSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEE
T ss_pred CHHHHHHHHHHHHcCCeEEEEEECCccc-------c--ccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEe
Confidence 6679999999999999999999988742 1 35777888888889999999999977641 1 10 1
Q ss_pred h----hhhcccCEEEEcCCCCCCCCC
Q psy12810 196 K----ELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 196 ~----~~~~~~D~vVlAtG~~~p~~~ 217 (276)
+ ..++++|.||+|+|.+ |+..
T Consensus 265 ~~~~~g~~~~~D~vv~a~G~~-p~~~ 289 (482)
T 1ojt_A 265 GANAPKEPQRYDAVLVAAGRA-PNGK 289 (482)
T ss_dssp SSSCCSSCEEESCEEECCCEE-ECGG
T ss_pred ccCCCceEEEcCEEEECcCCC-cCCC
Confidence 1 2357899999999998 7753
No 129
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.29 E-value=1.4e-12 Score=112.97 Aligned_cols=158 Identities=15% Similarity=0.131 Sum_probs=107.0
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeec--------CCCCCC--CHHHHHHHHHHHHhCCCeEEeccccC---
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYG--------IPTMKL--SKEVVQRRVKLLAAEGIEFKTNINVG--- 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~--------~~~~~~--~~~~~~~~~~~l~~~gv~~~~~~~v~--- 109 (276)
+||||+||+. |+++|++|+|+|+++.+||.+.+. .|.+.. ..++..++.+.+++.|++++++.++.
T Consensus 16 G~aGl~aA~~-l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 94 (332)
T 3lzw_A 16 GPVGLFTAFY-GGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVE 94 (332)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEE
T ss_pred CHHHHHHHHH-HHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEE
Confidence 6999999999 899999999999999999988532 233332 36677888888888899998775431
Q ss_pred ---c--------------cchhhhccC---CCCCC---------------------------------CCCCCCcchhhh
Q psy12810 110 ---K--------------DIAAKVTNH---TPQSD---------------------------------NQTKHCPPLIVN 136 (276)
Q Consensus 110 ---~--------------~v~v~iiG~---gp~~~---------------------------------g~~Gl~~A~~l~ 136 (276)
. +..+..+|+ .|..+ |.+|+++|..|+
T Consensus 95 ~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~ 174 (332)
T 3lzw_A 95 KQADGVFKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYFVDDLQKFAGRRVAILGGGDSAVDWALMLE 174 (332)
T ss_dssp ECTTSCEEEEESSEEEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEESSCSCGGGGBTCEEEEECSSHHHHHHHHHHT
T ss_pred ECCCCcEEEEECCCEEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEEecCCHHHcCCCEEEEECCCHhHHHHHHHHH
Confidence 1 111112344 22111 334666777777
Q ss_pred hCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------c------chhhhhccc
Q psy12810 137 IVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD--------I------AAKELYEEF 202 (276)
Q Consensus 137 ~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~------~~~~~~~~~ 202 (276)
+.|.+|+++++.+.+. ... ...+.+++.||++++++.+..- + +++..++++
T Consensus 175 ~~~~~v~~~~~~~~~~-----------~~~----~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~ 239 (332)
T 3lzw_A 175 PIAKEVSIIHRRDKFR-----------AHE----HSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEI 239 (332)
T ss_dssp TTBSEEEEECSSSSCS-----------SCH----HHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEEC
T ss_pred hhCCeEEEEEecCcCC-----------ccH----HHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEEC
Confidence 8888888888777531 111 2234477889999998776410 1 111346889
Q ss_pred CEEEEcCCCCCCCCC
Q psy12810 203 DALLLCTGATWPRDL 217 (276)
Q Consensus 203 D~vVlAtG~~~p~~~ 217 (276)
|.||+|+|.. |+..
T Consensus 240 D~vv~a~G~~-p~~~ 253 (332)
T 3lzw_A 240 DDLIVNYGFV-SSLG 253 (332)
T ss_dssp SEEEECCCEE-CCCG
T ss_pred CEEEEeeccC-CCch
Confidence 9999999998 7654
No 130
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.29 E-value=3.9e-12 Score=117.21 Aligned_cols=100 Identities=10% Similarity=-0.005 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHhcCcEEEeeeeeccc----------------------cchhhhhcccCEEEEcCCCCCCCCCCCCCcC
Q psy12810 166 KEVVQRRVKLLAAEGIEFKTNINVGKD----------------------IAAKELYEEFDALLLCTGATWPRDLPIPGRQ 223 (276)
Q Consensus 166 ~~~~~~~~~~l~~~gv~i~~~~~v~~~----------------------~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~ 223 (276)
.++.+++....++.+..+++++.|+.. .+++..++.++.||+|||.. |+.|+.++.
T Consensus 145 ~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~-P~iP~~~~~- 222 (501)
T 4b63_A 145 LEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGT-AKMPSGLPQ- 222 (501)
T ss_dssp HHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCE-ECCCTTSCC-
T ss_pred HHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCC-CCCCCCCCC-
Confidence 456666666566667778888876410 01122357799999999987 888776543
Q ss_pred CCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhh
Q psy12810 224 LSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSL 274 (276)
Q Consensus 224 ~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~ 274 (276)
...++|+.++.+....+... .+.+|+|+|||+|.||+|++..+.
T Consensus 223 ~g~v~Hss~y~~~~~~~~~~-------~~~gKrV~VVG~G~SA~ei~~~L~ 266 (501)
T 4b63_A 223 DPRIIHSSKYCTTLPALLKD-------KSKPYNIAVLGSGQSAAEIFHDLQ 266 (501)
T ss_dssp CTTEEEGGGHHHHHHHHSCC-------TTSCCEEEEECCSHHHHHHHHHHH
T ss_pred Ccceeeccccccchhhcccc-------ccCCcEEEEECCcHHHHHHHHHHH
Confidence 24588998888877655332 278999999999999999998875
No 131
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.28 E-value=2.6e-12 Score=110.57 Aligned_cols=159 Identities=17% Similarity=0.163 Sum_probs=105.8
Q ss_pred ccchhchHHHHHhhCCCeEEE-eccCCCCCceeeec-----CCCCC---CCHHHHHHHHHHHHhCCCeEEecccc----C
Q psy12810 43 FTATLSYHISIQHLVGHSVTV-FERNDRVGGLLQYG-----IPTMK---LSKEVVQRRVKLLAAEGIEFKTNINV----G 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l-~Ek~~~lGG~~~~~-----~~~~~---~~~~~~~~~~~~l~~~gv~~~~~~~v----~ 109 (276)
+||||+||.. |+++|++|+| +|| +.+||.+.+. .|.+. ...++..++.+.+++.|++++.+... +
T Consensus 13 G~aGl~aA~~-l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~ 90 (315)
T 3r9u_A 13 GPAGLSAGLY-ATRGGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMVGVEQILKN 90 (315)
T ss_dssp SHHHHHHHHH-HHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECCCEEEEEEC
T ss_pred CHHHHHHHHH-HHHCCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEEEEEEEecC
Confidence 6999999999 8999999999 999 6799988553 24333 33678888888888899988765210 0
Q ss_pred --ccch--------------hhhccCCCCCC----------------------------------CCCCCCcchhhhhCC
Q psy12810 110 --KDIA--------------AKVTNHTPQSD----------------------------------NQTKHCPPLIVNIVG 139 (276)
Q Consensus 110 --~~v~--------------v~iiG~gp~~~----------------------------------g~~Gl~~A~~l~~~G 139 (276)
..+. +...|+.|..+ |.+|+++|..|++.|
T Consensus 91 ~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g 170 (315)
T 3r9u_A 91 SDGSFTIKLEGGKTELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANIC 170 (315)
T ss_dssp TTSCEEEEETTSCEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTS
T ss_pred CCCcEEEEEecCCEEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhC
Confidence 0111 11123322111 334777788888889
Q ss_pred cEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c--------c---chhhhhcccCEE
Q psy12810 140 HSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D--------I---AAKELYEEFDAL 205 (276)
Q Consensus 140 ~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~--------~---~~~~~~~~~D~v 205 (276)
.+|+++++.+.+ ...+++.. +.+++.||++++++.+.. + . +++..++++|.|
T Consensus 171 ~~v~~~~~~~~~-----------~~~~~~~~---~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~v 236 (315)
T 3r9u_A 171 SKIYLIHRRDEF-----------RAAPSTVE---KVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGI 236 (315)
T ss_dssp SEEEEECSSSSC-----------BSCHHHHH---HHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCE
T ss_pred CEEEEEEeCCCC-----------CCCHHHHH---HHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeE
Confidence 999999888764 12333322 334678999999887641 0 1 122236889999
Q ss_pred EEcCCCCCCCCCC
Q psy12810 206 LLCTGATWPRDLP 218 (276)
Q Consensus 206 VlAtG~~~p~~~~ 218 (276)
|+|+|.. |+...
T Consensus 237 v~a~G~~-p~~~~ 248 (315)
T 3r9u_A 237 FTFVGLN-VRNEI 248 (315)
T ss_dssp EECSCEE-ECCGG
T ss_pred EEEEcCC-CCchh
Confidence 9999998 76543
No 132
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.28 E-value=4e-13 Score=121.72 Aligned_cols=145 Identities=17% Similarity=0.119 Sum_probs=89.3
Q ss_pred hhccCCCCCCCCCCCCcchhhhh---CCcEEEEEcCCCccce--eeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeee
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNI---VGHSVTVFERNDRVGG--LLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~---~G~~Vtvie~~~~~gg--~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v 189 (276)
.|||+|++ |+++|..|++ .|++|+|||+.+.... .+.+-........++...+.+.+++.|++++.+...
T Consensus 8 vIIGgG~a-----Gl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~ 82 (437)
T 3sx6_A 8 VILGAGTG-----GMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAE 82 (437)
T ss_dssp EEECCSTT-----HHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEE
T ss_pred EEECCcHH-----HHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEE
Confidence 34999999 9999999999 8999999999986421 000000011122333334556677889999865433
Q ss_pred ccccc------hhhhhcccCEEEEcCCCCCCCCCCCCCcCCC--C---eeehHHHHHHHHHhhcCCCCCCCCCCCCCeEE
Q psy12810 190 GKDIA------AKELYEEFDALLLCTGATWPRDLPIPGRQLS--G---IYFAMSFLESWQKKQMGNENVSPISAKDKNVI 258 (276)
Q Consensus 190 ~~~~~------~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~--g---v~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vv 258 (276)
..+.. .+..++.||+||+|||++ |+.+++||.+.. . +.+..+..+..+.... ...+++++
T Consensus 83 ~id~~~~~V~~~~g~~i~~d~lviAtG~~-~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~~~~~v 153 (437)
T 3sx6_A 83 QIDAEAQNITLADGNTVHYDYLMIATGPK-LAFENVPGSDPHEGPVQSICTVDHAERAFAEYQA--------LLREPGPI 153 (437)
T ss_dssp EEETTTTEEEETTSCEEECSEEEECCCCE-ECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHH--------HHHSCCCE
T ss_pred EEEcCCCEEEECCCCEEECCEEEECCCCC-cCcccCCCCCcccCcceecccccHHHHHHHHHHH--------HHhCCCEE
Confidence 22211 122358899999999998 888889987643 2 3333333322221111 02245678
Q ss_pred EEcCChHH------HHHHHHh
Q psy12810 259 VIGGGDTG------CDCIATS 273 (276)
Q Consensus 259 VIGgG~~G------~E~A~~~ 273 (276)
|||+|.+| +|+|..+
T Consensus 154 VVGgG~~~g~~G~~~E~a~~l 174 (437)
T 3sx6_A 154 VIGAMAGASCFGPAYEYAMIV 174 (437)
T ss_dssp EEEECTTCCCCHHHHHHHHHH
T ss_pred EEEcCCCCCcCcHHHHHHHHH
Confidence 99996654 8888544
No 133
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.26 E-value=1.9e-12 Score=118.30 Aligned_cols=160 Identities=17% Similarity=0.171 Sum_probs=101.9
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee-cC-C----------------------CCCCCHHHH----------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY-GI-P----------------------TMKLSKEVV---------- 88 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~-~~-~----------------------~~~~~~~~~---------- 88 (276)
+|||++||.. |+++|++|+|+||++.+||+|.+ ++ | .+++ ..+.
T Consensus 13 G~aGl~aA~~-l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 90 (466)
T 3l8k_A 13 GGAGYHGAFR-LAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDF-STVQDRKDYVQELR 90 (466)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCH-HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCH-HHHHHHHHhheecc
Confidence 6999999999 89999999999988899999853 22 1 1111 1111
Q ss_pred --HHHHHHHHhCCCeEEecccc-------------Ccc------chhhhccCCCCCC-----------------------
Q psy12810 89 --QRRVKLLAAEGIEFKTNINV-------------GKD------IAAKVTNHTPQSD----------------------- 124 (276)
Q Consensus 89 --~~~~~~l~~~gv~~~~~~~v-------------~~~------v~v~iiG~gp~~~----------------------- 124 (276)
......+++.|+++..+... +.. ..+..+|+.|..+
T Consensus 91 ~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~t~~~~~~~~~~l~~ 170 (466)
T 3l8k_A 91 FKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVEYCLTSDDIFGYKTSFRK 170 (466)
T ss_dssp HHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGGGSBCHHHHHSTTCSCCS
T ss_pred ccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCccceEeHHHHHHHHHHHhh
Confidence 22233445668887655210 001 1111223322111
Q ss_pred ----------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCC-cHHHHHHHHHHHHhcCcEEEeeeeeccc-
Q psy12810 125 ----------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKL-SKEVVQRRVKLLAAEGIEFKTNINVGKD- 192 (276)
Q Consensus 125 ----------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~-~~~~~~~~~~~l~~~gv~i~~~~~v~~~- 192 (276)
|++|+++|..|++.|.+|+++++.+++. + .. ++++...+.+.++ |++++++.+..-
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------~--~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~ 238 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL-------I--TLEDQDIVNTLLSILK---LNIKFNSPVTEVK 238 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------T--TSCCHHHHHHHHHHHC---CCEECSCCEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC-------C--CCCCHHHHHHHHhcCE---EEEEECCEEEEEE
Confidence 4558999999999999999999988642 1 23 6666666655554 888887665310
Q ss_pred ----------c---chhhhhcccCEEEEcCCCCCCCCC
Q psy12810 193 ----------I---AAKELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 193 ----------~---~~~~~~~~~D~vVlAtG~~~p~~~ 217 (276)
. +++..++++|.||+|+|.+ |+..
T Consensus 239 ~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~-p~~~ 275 (466)
T 3l8k_A 239 KIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRR-PVIP 275 (466)
T ss_dssp EEETTEEEEEECCTTSCCEEEEESCEEECCCEE-ECCC
T ss_pred EcCCCcEEEEEEecCCceEEEEcCEEEECcCCC-cccc
Confidence 1 1122368899999999998 7765
No 134
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.26 E-value=6.8e-12 Score=110.44 Aligned_cols=162 Identities=13% Similarity=0.038 Sum_probs=104.8
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeec--------CCCCC--CCHHHHHHHHHHHHhCCCeEEeccccC---
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYG--------IPTMK--LSKEVVQRRVKLLAAEGIEFKTNINVG--- 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~--------~~~~~--~~~~~~~~~~~~l~~~gv~~~~~~~v~--- 109 (276)
+|||++||+. |+++|++|+|||+++.+||.|... .|.+. .+..+.+++.+.+.+.+++++++..+.
T Consensus 23 G~aGl~aA~~-l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~ 101 (360)
T 3ab1_A 23 GPTGIFAAFQ-CGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYT 101 (360)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEE
T ss_pred CHHHHHHHHH-HHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEE
Confidence 6999999999 899999999999999999988532 22222 125677777788888898887764331
Q ss_pred ---c---------------cchhhhccCC---CCCC----------------------------------CCCCCCcchh
Q psy12810 110 ---K---------------DIAAKVTNHT---PQSD----------------------------------NQTKHCPPLI 134 (276)
Q Consensus 110 ---~---------------~v~v~iiG~g---p~~~----------------------------------g~~Gl~~A~~ 134 (276)
. +..+...|+. |..+ |.+|+++|..
T Consensus 102 ~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~ 181 (360)
T 3ab1_A 102 KLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGGGDSALDWTVG 181 (360)
T ss_dssp ECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGGGGTTCEEEEECSSHHHHHHHHH
T ss_pred ECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHHHcCCCcEEEECCCHHHHHHHHH
Confidence 0 0011123431 1111 2234455666
Q ss_pred hhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c--------c---chhhhhc
Q psy12810 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D--------I---AAKELYE 200 (276)
Q Consensus 135 l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~--------~---~~~~~~~ 200 (276)
|++.|.+|+++++.+.+. ....+...+.+.+++.||++++++.+.. + . +++...+
T Consensus 182 l~~~g~~V~lv~~~~~~~-----------~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i 250 (360)
T 3ab1_A 182 LIKNAASVTLVHRGHEFQ-----------GHGKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTV 250 (360)
T ss_dssp TTTTSSEEEEECSSSSCS-----------SCSHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEE
T ss_pred HHhcCCEEEEEEcCCCCC-----------CCHHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEE
Confidence 677778888888776531 1123444556667788999999976641 0 1 1122467
Q ss_pred ccCEEEEcCCCCCCCCC
Q psy12810 201 EFDALLLCTGATWPRDL 217 (276)
Q Consensus 201 ~~D~vVlAtG~~~p~~~ 217 (276)
++|.||+|+|.. |+..
T Consensus 251 ~~D~vi~a~G~~-p~~~ 266 (360)
T 3ab1_A 251 EADRLLILIGFK-SNLG 266 (360)
T ss_dssp ECSEEEECCCBC-CSCG
T ss_pred eCCEEEECCCCC-CCHH
Confidence 899999999998 7653
No 135
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.26 E-value=1e-11 Score=107.08 Aligned_cols=154 Identities=12% Similarity=0.062 Sum_probs=102.0
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeec-----CCCCCC--CHHHHHHHHHHHHhCCCeEEecccc-------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYG-----IPTMKL--SKEVVQRRVKLLAAEGIEFKTNINV------- 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~-----~~~~~~--~~~~~~~~~~~l~~~gv~~~~~~~v------- 108 (276)
+||||+||+. |+++|++|+|||++ +||.+.+. .|.+.. ..++.+++.+.+.+.|+++++. .+
T Consensus 24 G~aGl~aA~~-l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~ 99 (323)
T 3f8d_A 24 GPAAYGAALY-SARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLD-IVEKIENRG 99 (323)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEES-CEEEEEEC-
T ss_pred cHHHHHHHHH-HHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEE-EEEEEEecC
Confidence 6999999999 89999999999997 99988653 344433 2667788888888889988763 21
Q ss_pred ---------Ccc----chhhhccCCCCCC----------------------------------CCCCCCcchhhhhCCcE
Q psy12810 109 ---------GKD----IAAKVTNHTPQSD----------------------------------NQTKHCPPLIVNIVGHS 141 (276)
Q Consensus 109 ---------~~~----v~v~iiG~gp~~~----------------------------------g~~Gl~~A~~l~~~G~~ 141 (276)
+.. ..+...|+.|..+ |.+|+++|..|++.|.+
T Consensus 100 ~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~ 179 (323)
T 3f8d_A 100 DEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTK 179 (323)
T ss_dssp -CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSE
T ss_pred CEEEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCe
Confidence 010 1111123322111 33477777888888889
Q ss_pred EEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHH-hcCcEEEeeeeecc---c-----c--c----hhhhhcccCEEE
Q psy12810 142 VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLA-AEGIEFKTNINVGK---D-----I--A----AKELYEEFDALL 206 (276)
Q Consensus 142 Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~i~~~~~v~~---~-----~--~----~~~~~~~~D~vV 206 (276)
|+++++.+.+. ..++ +.+.+. +.||++++++.+.. + + . ++..++++|.||
T Consensus 180 v~~~~~~~~~~-----------~~~~----~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv 244 (323)
T 3f8d_A 180 VYLIHRRDTFK-----------AQPI----YVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVF 244 (323)
T ss_dssp EEEECSSSSCC-----------SCHH----HHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEE
T ss_pred EEEEEeCCCCC-----------cCHH----HHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEE
Confidence 99998877642 1222 233344 45999999986641 1 1 1 222368899999
Q ss_pred EcCCCCCCCC
Q psy12810 207 LCTGATWPRD 216 (276)
Q Consensus 207 lAtG~~~p~~ 216 (276)
+|+|.. |+.
T Consensus 245 ~a~G~~-p~~ 253 (323)
T 3f8d_A 245 IEIGFD-PPT 253 (323)
T ss_dssp ECCCEE-CCH
T ss_pred EEECCC-CCh
Confidence 999998 763
No 136
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.25 E-value=8.1e-12 Score=110.04 Aligned_cols=169 Identities=17% Similarity=0.192 Sum_probs=104.3
Q ss_pred ccchhchHHHHHhhCCC-eEEEeccCCCCCceeee-----------------cCCCC-----C-----------CC-HHH
Q psy12810 43 FTATLSYHISIQHLVGH-SVTVFERNDRVGGLLQY-----------------GIPTM-----K-----------LS-KEV 87 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~-~V~l~Ek~~~lGG~~~~-----------------~~~~~-----~-----------~~-~~~ 87 (276)
+|||+++|+. |+++|+ +|+|||+++ +||.|.+ +++.+ . .. ..+
T Consensus 13 G~aGl~aA~~-l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (369)
T 3d1c_A 13 GAAGIGMAIT-LKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGETY 90 (369)
T ss_dssp SHHHHHHHHH-HHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSSCBHHHH
T ss_pred CHHHHHHHHH-HHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccccCCCHHHH
Confidence 6999999999 899999 999999988 9997732 11000 0 01 344
Q ss_pred HHHHHHHHHhCCCeEEeccccC--------c-----------cchhhhccCCC--CCC----------------------
Q psy12810 88 VQRRVKLLAAEGIEFKTNINVG--------K-----------DIAAKVTNHTP--QSD---------------------- 124 (276)
Q Consensus 88 ~~~~~~~l~~~gv~~~~~~~v~--------~-----------~v~v~iiG~gp--~~~---------------------- 124 (276)
..++...+++.|+++++++++. . +..+..+|+.+ ..+
T Consensus 91 ~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~p~ip~~~~~~~~~~~~~~~~~~~~vv 170 (369)
T 3d1c_A 91 AEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTETYHADYIFVATGDYNFPKKPFKYGIHYSEIEDFDNFNKGQYV 170 (369)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCCEEEEEEEECCCSTTSBCCCSSSCEEGGGCSCGGGSCSSEEE
T ss_pred HHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCCEEEeCEEEECCCCCCccCCCCCceechhhcCChhhcCCCEEE
Confidence 5556667778899888775331 0 01111234321 100
Q ss_pred ----CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcC-cEEEeeeeeccc-------
Q psy12810 125 ----NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEG-IEFKTNINVGKD------- 192 (276)
Q Consensus 125 ----g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~g-v~i~~~~~v~~~------- 192 (276)
|.+|+++|..|++.|.+|+++++.+.+.. +...+....++...+.+.+.+++.| |++++++.+..-
T Consensus 171 VvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~--~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~ 248 (369)
T 3d1c_A 171 VIGGNESGFDAAYQLAKNGSDIALYTSTTGLND--PDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQY 248 (369)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECC------------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEE
T ss_pred EECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC--CCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCce
Confidence 45688889999999999999999876421 1111222345666677777888886 999988765421
Q ss_pred -cc-hhhhhc-ccCEEEEcCCCCCCCC
Q psy12810 193 -IA-AKELYE-EFDALLLCTGATWPRD 216 (276)
Q Consensus 193 -~~-~~~~~~-~~D~vVlAtG~~~p~~ 216 (276)
+. .+...+ .+|.||+|+|.. |+.
T Consensus 249 ~v~~~~g~~~~~~d~vi~a~G~~-~~~ 274 (369)
T 3d1c_A 249 HISFDSGQSVHTPHEPILATGFD-ATK 274 (369)
T ss_dssp EEEESSSCCEEESSCCEECCCBC-GGG
T ss_pred EEEecCCeEeccCCceEEeeccC-Ccc
Confidence 00 111233 469999999998 765
No 137
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.25 E-value=2.4e-12 Score=116.94 Aligned_cols=164 Identities=17% Similarity=0.175 Sum_probs=103.6
Q ss_pred ccchhchHHHHHhhC--CCeEEEeccCCCCCceeeecC-----CCCCCCHHHHHHHHHHHHhCCCeEEecccc-------
Q psy12810 43 FTATLSYHISIQHLV--GHSVTVFERNDRVGGLLQYGI-----PTMKLSKEVVQRRVKLLAAEGIEFKTNINV------- 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~~--G~~V~l~Ek~~~lGG~~~~~~-----~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v------- 108 (276)
+|||++||.. |++. |++|+|+|+++.+|. ...++ .....+.++..+..+.+++.|++++.+..+
T Consensus 9 G~aGl~aA~~-l~~~~~g~~V~lie~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~ 86 (447)
T 1nhp_A 9 SHGGYEAVEE-LLNLHPDAEIQWYEKGDFISF-LSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEITAIQPKE 86 (447)
T ss_dssp SHHHHHHHHH-HHHHCTTSEEEEEESSSSSSB-CGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEEEEETTT
T ss_pred CHHHHHHHHH-HHHhCcCCeEEEEECCCccCc-ccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEEEEeCCC
Confidence 6999999999 7877 999999999887662 11121 111112222222345566678877655332
Q ss_pred ----------Ccc--ch----hhhccCCCCCC---------------------------------------CCCCCCcch
Q psy12810 109 ----------GKD--IA----AKVTNHTPQSD---------------------------------------NQTKHCPPL 133 (276)
Q Consensus 109 ----------~~~--v~----v~iiG~gp~~~---------------------------------------g~~Gl~~A~ 133 (276)
+.. +. +..+|+.|..| |.+|+++|.
T Consensus 87 ~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~ 166 (447)
T 1nhp_A 87 HQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAE 166 (447)
T ss_dssp TEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHH
T ss_pred CEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHH
Confidence 000 00 00122211100 344888888
Q ss_pred hhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c-----cchhhhhcccCEE
Q psy12810 134 IVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D-----IAAKELYEEFDAL 205 (276)
Q Consensus 134 ~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~-----~~~~~~~~~~D~v 205 (276)
.|++.|.+|+++++.+.+.. ...++++...+.+.+++.||++++++.+.. + +..+..++++|.|
T Consensus 167 ~l~~~g~~Vtlv~~~~~~l~--------~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~d~v 238 (447)
T 1nhp_A 167 AFAKAGKKVTVIDILDRPLG--------VYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLV 238 (447)
T ss_dssp HHHHTTCEEEEEESSSSTTT--------TTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEESSCEEECSEE
T ss_pred HHHHCCCeEEEEecCccccc--------ccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEECCCEEECCEE
Confidence 99999999999999886421 024677778888889999999999876641 1 1112235789999
Q ss_pred EEcCCCCCCCCC
Q psy12810 206 LLCTGATWPRDL 217 (276)
Q Consensus 206 VlAtG~~~p~~~ 217 (276)
|+|+|.+ |+..
T Consensus 239 i~a~G~~-p~~~ 249 (447)
T 1nhp_A 239 VVAVGVR-PNTA 249 (447)
T ss_dssp EECSCEE-ESCG
T ss_pred EECcCCC-CChH
Confidence 9999998 7654
No 138
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.25 E-value=1e-12 Score=121.10 Aligned_cols=153 Identities=16% Similarity=0.199 Sum_probs=87.9
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCC---CCC-cHHHHHHHHHHH--HhcCcEEEeee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPT---MKL-SKEVVQRRVKLL--AAEGIEFKTNI 187 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~---~~~-~~~~~~~~~~~l--~~~gv~i~~~~ 187 (276)
|+|+|+|++ |+.+|..|++.+++|||||++++. ++.--++. ..+ .+++...+.+.+ .+.+++++.+.
T Consensus 45 VVIIGgG~A-----Gl~~A~~L~~~~~~VtLId~~~~~--~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~ 117 (502)
T 4g6h_A 45 VLILGSGWG-----AISFLKHIDTKKYNVSIISPRSYF--LFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAE 117 (502)
T ss_dssp EEEECSSHH-----HHHHHHHSCTTTCEEEEEESSSEE--ECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEE
T ss_pred EEEECCcHH-----HHHHHHHhhhCCCcEEEECCCCCc--ccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEE
Confidence 445999999 999999999999999999999863 22100110 001 111111111212 24578887765
Q ss_pred eecccc--------------------------chhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCe--eehHHHH-----
Q psy12810 188 NVGKDI--------------------------AAKELYEEFDALLLCTGATWPRDLPIPGRQLSGI--YFAMSFL----- 234 (276)
Q Consensus 188 ~v~~~~--------------------------~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv--~~~~~~l----- 234 (276)
....+. .++..+++||++|||||+. |+.+++||.+.... .+..+..
T Consensus 118 v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~-~~~~~ipG~~e~a~~l~t~~dA~~ir~~ 196 (502)
T 4g6h_A 118 ATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAE-PNTFGIPGVTDYGHFLKEIPNSLEIRRT 196 (502)
T ss_dssp EEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCE-ECCTTCTTHHHHCEECSSHHHHHHHHHH
T ss_pred EEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcc-cccCCccCcccccCCCCCHHHHHHHHHH
Confidence 432211 1223468999999999998 99999999753221 1111111
Q ss_pred --HHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 235 --ESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 235 --~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
...+........ ........+++|||||++|+|+|.++.+
T Consensus 197 l~~~~e~a~~~~~~-~~~~~~~~~vvVvGgG~tGvE~A~~l~~ 238 (502)
T 4g6h_A 197 FAANLEKANLLPKG-DPERRRLLSIVVVGGGPTGVEAAGELQD 238 (502)
T ss_dssp HHHHHHHHHHSCTT-CHHHHHHTEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccc-chhhccccceEEECCCcchhhhHHHHHH
Confidence 111111110000 0000123579999999999999988753
No 139
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.25 E-value=9.4e-13 Score=119.35 Aligned_cols=164 Identities=14% Similarity=0.131 Sum_probs=104.6
Q ss_pred ccchhchHHHHHhhCC--CeEEEeccCCCCCce-ee--ecCCCCCCC-H-HHHHHHHHHHHhCCCeEEeccccC------
Q psy12810 43 FTATLSYHISIQHLVG--HSVTVFERNDRVGGL-LQ--YGIPTMKLS-K-EVVQRRVKLLAAEGIEFKTNINVG------ 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G--~~V~l~Ek~~~lGG~-~~--~~~~~~~~~-~-~~~~~~~~~l~~~gv~~~~~~~v~------ 109 (276)
+|||++||.. |++.| ++|+|+|+++..++. |. +........ . .+.......+++.+++++++.++.
T Consensus 9 G~AGl~aA~~-l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~ 87 (437)
T 4eqs_A 9 VAGGATCASQ-IRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVIAINDER 87 (437)
T ss_dssp STTHHHHHHH-HHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEEEEETTT
T ss_pred CHHHHHHHHH-HHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEEEEEccC
Confidence 6999999999 88888 579999998765532 21 111111111 1 011112234566788887764320
Q ss_pred -----------------ccchhhhccCCCCCC------------------------------------CCCCCCcchhhh
Q psy12810 110 -----------------KDIAAKVTNHTPQSD------------------------------------NQTKHCPPLIVN 136 (276)
Q Consensus 110 -----------------~~v~v~iiG~gp~~~------------------------------------g~~Gl~~A~~l~ 136 (276)
-+..+..+|+.|..+ |++|+++|..|+
T Consensus 88 ~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~ 167 (437)
T 4eqs_A 88 QTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLY 167 (437)
T ss_dssp TEEEEEETTTTEEEEEECSEEEECCCEEECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHH
T ss_pred cEEEEEeccCCceEEEEcCEEEECCCCccccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHH
Confidence 011111234322211 556999999999
Q ss_pred hCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc-----cchhhhhcccCEEEEcCCC
Q psy12810 137 IVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD-----IAAKELYEEFDALLLCTGA 211 (276)
Q Consensus 137 ~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~-----~~~~~~~~~~D~vVlAtG~ 211 (276)
+.|.+||++++.+++. + ..++++...+.+.+++.||++++++.+... ...+..++++|.|++|+|.
T Consensus 168 ~~g~~Vtlv~~~~~ll---~------~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 168 ERGLHPTLIHRSDKIN---K------LMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp HHTCEEEEEESSSCCS---T------TSCGGGGHHHHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSEEEECCCE
T ss_pred hcCCcceeeeeecccc---c------cccchhHHHHHHHhhccceEEEeccEEEEecCCeeeecCCeEEeeeeEEEEece
Confidence 9999999999988752 1 234556667778889999999999987521 1122346789999999999
Q ss_pred CCCCCC
Q psy12810 212 TWPRDL 217 (276)
Q Consensus 212 ~~p~~~ 217 (276)
. |+..
T Consensus 239 ~-Pn~~ 243 (437)
T 4eqs_A 239 H-PNSK 243 (437)
T ss_dssp E-ESCG
T ss_pred e-cCcH
Confidence 8 7754
No 140
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.23 E-value=2e-11 Score=105.84 Aligned_cols=157 Identities=16% Similarity=0.161 Sum_probs=101.7
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeec-----CCCCC---CCHHHHHHHHHHHHhCCCeEEecccc----C-
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYG-----IPTMK---LSKEVVQRRVKLLAAEGIEFKTNINV----G- 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~-----~~~~~---~~~~~~~~~~~~l~~~gv~~~~~~~v----~- 109 (276)
+|||++||.. |+++|++|+|+|++ .+||.|.+. .|.+. ....+.+++.+.+++.|++++.+... .
T Consensus 17 G~aGl~aA~~-l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i~~~~ 94 (325)
T 2q7v_A 17 GPAGLTAAIY-TGRAQLSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEMDEVQGVQHDA 94 (325)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEECCEEEEEECT
T ss_pred CHHHHHHHHH-HHHcCCcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEeeeEEEEEecc
Confidence 6999999999 89999999999998 699988653 23332 12566777778888888887653210 0
Q ss_pred -cc--chh--------------hhccCCCCCC----------------------------------CCCCCCcchhhhhC
Q psy12810 110 -KD--IAA--------------KVTNHTPQSD----------------------------------NQTKHCPPLIVNIV 138 (276)
Q Consensus 110 -~~--v~v--------------~iiG~gp~~~----------------------------------g~~Gl~~A~~l~~~ 138 (276)
.+ +.+ ...|+.|..+ |.+|+++|..|++.
T Consensus 95 ~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~ 174 (325)
T 2q7v_A 95 TSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKF 174 (325)
T ss_dssp TSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTT
T ss_pred CCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhc
Confidence 00 000 0112211100 34477788888889
Q ss_pred CcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHH-hcCcEEEeeeeecc---c-------c----chhhhhcccC
Q psy12810 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLA-AEGIEFKTNINVGK---D-------I----AAKELYEEFD 203 (276)
Q Consensus 139 G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~i~~~~~v~~---~-------~----~~~~~~~~~D 203 (276)
|.+|+++++.+.+. .++. +.+.+. +.||++++++.+.. + . +++..++++|
T Consensus 175 g~~Vtlv~~~~~~~-----------~~~~----~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D 239 (325)
T 2q7v_A 175 ADEVTVIHRRDTLR-----------ANKV----AQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATD 239 (325)
T ss_dssp CSEEEEECSSSSCC-----------SCHH----HHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECS
T ss_pred CCEEEEEeCCCcCC-----------cchH----HHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcC
Confidence 99999999877541 1222 233344 46999999887641 1 1 1222367899
Q ss_pred EEEEcCCCCCCCCC
Q psy12810 204 ALLLCTGATWPRDL 217 (276)
Q Consensus 204 ~vVlAtG~~~p~~~ 217 (276)
.||+|+|.. |+..
T Consensus 240 ~vi~a~G~~-p~~~ 252 (325)
T 2q7v_A 240 GVFIFIGHV-PNTA 252 (325)
T ss_dssp EEEECSCEE-ESCG
T ss_pred EEEEccCCC-CChH
Confidence 999999998 7754
No 141
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.22 E-value=8.8e-12 Score=113.24 Aligned_cols=162 Identities=20% Similarity=0.192 Sum_probs=99.6
Q ss_pred ccchhchHHHHHhhC--CCeEEEeccCCCCCceeeecCCCC----CCCHHHHHHHHHHH-HhCCCeEEeccccC------
Q psy12810 43 FTATLSYHISIQHLV--GHSVTVFERNDRVGGLLQYGIPTM----KLSKEVVQRRVKLL-AAEGIEFKTNINVG------ 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~--G~~V~l~Ek~~~lGG~~~~~~~~~----~~~~~~~~~~~~~l-~~~gv~~~~~~~v~------ 109 (276)
+||||+||.. |+++ |++|+|||+++.+++. .++.|.+ ..+..+..+..+.+ ++.|+++++++++.
T Consensus 12 G~aGl~aA~~-L~~~~~~~~V~vie~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~~ 89 (449)
T 3kd9_A 12 GAAGMSAASR-VKRLKPEWDVKVFEATEWVSHA-PCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGY 89 (449)
T ss_dssp SHHHHHHHHH-HHHHCTTSEEEEECSSSCCC-------------------------CTHHHHTTCEEETTCEEEEECSSE
T ss_pred cHHHHHHHHH-HHHhCcCCCEEEEECCCccccC-CcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEEEEEecCC
Confidence 6999999999 7777 8999999999877752 2333322 22333444444444 57899888774320
Q ss_pred ---------ccc----hhhhccCCCCCC---------------------------------------CCCCCCcchhhhh
Q psy12810 110 ---------KDI----AAKVTNHTPQSD---------------------------------------NQTKHCPPLIVNI 137 (276)
Q Consensus 110 ---------~~v----~v~iiG~gp~~~---------------------------------------g~~Gl~~A~~l~~ 137 (276)
..+ .+..+|+.|..+ |++|+++|..|++
T Consensus 90 ~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~ 169 (449)
T 3kd9_A 90 VRVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAA 169 (449)
T ss_dssp EEEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHH
T ss_pred CEEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHh
Confidence 000 011123221111 3458888899999
Q ss_pred CCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------cchhhhhcccCEEEEcC
Q psy12810 138 VGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD--------IAAKELYEEFDALLLCT 209 (276)
Q Consensus 138 ~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~~~~~~~~~~D~vVlAt 209 (276)
.|.+|+++++.+++. + ...++++...+.+.+++. |++++++.+..- ...+..++++|.||+|+
T Consensus 170 ~g~~Vtlv~~~~~~l-------~-~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~a~ 240 (449)
T 3kd9_A 170 QGKNVTMIVRGERVL-------R-RSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEERVEKVVTDAGEYKAELVILAT 240 (449)
T ss_dssp TTCEEEEEESSSSTT-------T-TTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSSSCCEEEETTEEEECSEEEECS
T ss_pred CCCeEEEEEcCCccc-------h-hhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCCCEEECCEEEEee
Confidence 999999999988642 1 015677777888888888 999998876411 11223468899999999
Q ss_pred CCCCCCC
Q psy12810 210 GATWPRD 216 (276)
Q Consensus 210 G~~~p~~ 216 (276)
|.+ |+.
T Consensus 241 G~~-p~~ 246 (449)
T 3kd9_A 241 GIK-PNI 246 (449)
T ss_dssp CEE-ECC
T ss_pred CCc-cCH
Confidence 998 764
No 142
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.21 E-value=2.3e-11 Score=104.65 Aligned_cols=157 Identities=17% Similarity=0.167 Sum_probs=101.2
Q ss_pred ccchhchHHHHHhhCCC-eEEEeccCCCCCceeeec-----CCCCC---CCHHHHHHHHHHHHhCCCeEEecccc-----
Q psy12810 43 FTATLSYHISIQHLVGH-SVTVFERNDRVGGLLQYG-----IPTMK---LSKEVVQRRVKLLAAEGIEFKTNINV----- 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~-~V~l~Ek~~~lGG~~~~~-----~~~~~---~~~~~~~~~~~~l~~~gv~~~~~~~v----- 108 (276)
+|||++||.. |+++|+ +|+|+|++ .+||.+.+. .|.+. ....+.+++.+.+.+.|++++.....
T Consensus 10 G~aGl~aA~~-l~~~g~~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~~ 87 (311)
T 2q0l_A 10 GPAGLSAGLY-ATRGGVKNAVLFEKG-MPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKK 87 (311)
T ss_dssp SHHHHHHHHH-HHHTTCSSEEEECSS-STTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEECSCEEEEEEE
T ss_pred cHHHHHHHHH-HHHCCCCcEEEEcCC-CCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEEc
Confidence 6999999999 899999 99999995 589988542 23321 22566677777788889887653100
Q ss_pred Cc--cc------------hhhhccCCCCCC----------------------------------CCCCCCcchhhhhCCc
Q psy12810 109 GK--DI------------AAKVTNHTPQSD----------------------------------NQTKHCPPLIVNIVGH 140 (276)
Q Consensus 109 ~~--~v------------~v~iiG~gp~~~----------------------------------g~~Gl~~A~~l~~~G~ 140 (276)
+. .+ .+...|+.|..+ |.+|+++|..|++.|.
T Consensus 88 ~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~ 167 (311)
T 2q0l_A 88 DSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICK 167 (311)
T ss_dssp TTEEEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSS
T ss_pred CCEEEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCC
Confidence 00 00 000122211110 3347888889999999
Q ss_pred EEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHH-hcCcEEEeeeeecc---c--------c----chhhhhcccCE
Q psy12810 141 SVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLA-AEGIEFKTNINVGK---D--------I----AAKELYEEFDA 204 (276)
Q Consensus 141 ~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~i~~~~~v~~---~--------~----~~~~~~~~~D~ 204 (276)
+|+++++.+.+. .++. +.+.+. +.||++++++.+.. + . +++..++++|.
T Consensus 168 ~Vtlv~~~~~~~-----------~~~~----~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~ 232 (311)
T 2q0l_A 168 KVYLIHRRDGFR-----------CAPI----TLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPG 232 (311)
T ss_dssp EEEEECSSSSCC-----------SCHH----HHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSE
T ss_pred EEEEEeeCCccC-----------CCHH----HHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCE
Confidence 999999887641 2232 233444 46999998876541 1 0 12223678999
Q ss_pred EEEcCCCCCCCCC
Q psy12810 205 LLLCTGATWPRDL 217 (276)
Q Consensus 205 vVlAtG~~~p~~~ 217 (276)
||+|+|.. |+..
T Consensus 233 vi~a~G~~-p~~~ 244 (311)
T 2q0l_A 233 FFIFVGYD-VNNA 244 (311)
T ss_dssp EEECSCEE-ECCG
T ss_pred EEEEecCc-cChh
Confidence 99999998 7754
No 143
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.21 E-value=3.7e-13 Score=123.86 Aligned_cols=149 Identities=15% Similarity=0.200 Sum_probs=87.9
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCCccceeeeecCCC-CCC------------------------
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERNDRVGGLLQYGIPT-MKL------------------------ 164 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~~~gg~~~~~~~~-~~~------------------------ 164 (276)
..+.|||+|++ |+.+|..|++. |.+|+|||+++.++ +.+..+.. +..
T Consensus 12 ~~vvIIGgG~A-----Gl~aA~~L~~~~~g~~V~lie~~~~~~-y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (493)
T 1m6i_A 12 VPFLLIGGGTA-----AFAAARSIRARDPGARVLIVSEDPELP-YMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYF 85 (493)
T ss_dssp EEEEEESCSHH-----HHHHHHHHHHHSTTCEEEEEESSSSCC-BCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBS
T ss_pred CCEEEECChHH-----HHHHHHHHHhcCCCCeEEEEeCCCCCC-CCCCCCCHHhhcCCccchhhcccccccccccccccc
Confidence 34455999999 99999998876 89999999988653 11100000 000
Q ss_pred -cHHHHH--HHHHHHHhcCcEEEeeeeec-cccc------hhhhhcccCEEEEcCCCCCCCCCCCCCcC----CCCeeeh
Q psy12810 165 -SKEVVQ--RRVKLLAAEGIEFKTNINVG-KDIA------AKELYEEFDALLLCTGATWPRDLPIPGRQ----LSGIYFA 230 (276)
Q Consensus 165 -~~~~~~--~~~~~l~~~gv~i~~~~~v~-~~~~------~~~~~~~~D~vVlAtG~~~p~~~~i~g~~----~~gv~~~ 230 (276)
+.+... .....+.+.|+++++++.+. .+.. .+..++.||+||+|||++ |+.+++++.. ..++++.
T Consensus 86 ~~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~-p~~~~~~~~~~~~~~~~v~~~ 164 (493)
T 1m6i_A 86 QPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGT-PRSLSAIDRAGAEVKSRTTLF 164 (493)
T ss_dssp SCGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEE-ECCCHHHHTSCHHHHHTEEEC
T ss_pred cchHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCC-CCCCCCcccccccccCceEEE
Confidence 000000 00000124689999987664 2211 112357899999999998 8877665431 2344433
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 231 MSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 231 ~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
.+.. +...+... ...+++++|||||++|+|+|..+.+
T Consensus 165 ~~~~-d~~~l~~~-------~~~~~~vvViGgG~iG~E~A~~l~~ 201 (493)
T 1m6i_A 165 RKIG-DFRSLEKI-------SREVKSITIIGGGFLGSELACALGR 201 (493)
T ss_dssp CSHH-HHHHHHHH-------HHHCSEEEEECCSHHHHHHHHHHHH
T ss_pred cCHH-HHHHHHHH-------hhcCCeEEEECCCHHHHHHHHHHHh
Confidence 2211 11111000 1358999999999999999998753
No 144
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.21 E-value=7.4e-12 Score=115.05 Aligned_cols=190 Identities=13% Similarity=0.070 Sum_probs=113.5
Q ss_pred ccccceeeccccchhccccccc----cccc---ccchhchHHHHHhhCC---CeEEEeccCCCCCceeeecC-----CCC
Q psy12810 17 QECEPVLSGKVPRIDLEYTINN----ECRA---FTATLSYHISIQHLVG---HSVTVFERNDRVGGLLQYGI-----PTM 81 (276)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~----~~~~---~paGl~aA~~~aa~~G---~~V~l~Ek~~~lGG~~~~~~-----~~~ 81 (276)
+-+.+..++.+.|+..++.... ++-. +|||++||.. |+++| ++|+|||+++.+|.. ..++ ...
T Consensus 11 ~~~~~~~~~~~~~~~~~~m~~~~m~~dvvIIGaG~aGl~aA~~-l~~~g~~~~~V~lie~~~~~~~~-~~~~~~~~~~~~ 88 (490)
T 2bc0_A 11 GMASMTGGQQMGRTLYDDDDKDRWGSKIVVVGANHAGTACIKT-MLTNYGDANEIVVFDQNSNISFL-GAGMALWIGEQI 88 (490)
T ss_dssp -------CCCCSCCTTCCCCTTCCCCEEEEECCSHHHHHHHHH-HHHHHGGGSEEEEECSSSCCSBC-GGGHHHHHTTSS
T ss_pred ccccccchhhhccccccccchhccCCcEEEECCCHHHHHHHHH-HHhcCCCCCeEEEEECCCCCCcc-ccccchhhcCcc
Confidence 3457888889999886653211 1111 6999999999 88888 999999998766532 1111 111
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEeccccC------cc-----------ch----hhhccCCCCC-----------------
Q psy12810 82 KLSKEVVQRRVKLLAAEGIEFKTNINVG------KD-----------IA----AKVTNHTPQS----------------- 123 (276)
Q Consensus 82 ~~~~~~~~~~~~~l~~~gv~~~~~~~v~------~~-----------v~----v~iiG~gp~~----------------- 123 (276)
..+..+.....+.+++.|++++++.++. +. +. +..+|+.|..
T Consensus 89 ~~~~~~~~~~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~ 168 (490)
T 2bc0_A 89 AGPEGLFYSDKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEA 168 (490)
T ss_dssp SCSGGGBSCCHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCB
T ss_pred CCHHHhhhcCHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCcccccccccccc
Confidence 1222222222345566777776553210 00 00 0011221100
Q ss_pred -------------------------C--------CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHH
Q psy12810 124 -------------------------D--------NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQ 170 (276)
Q Consensus 124 -------------------------~--------g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~ 170 (276)
+ |++|+++|..|++.|.+|+++++.+.+. + ...++++..
T Consensus 169 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------~-~~~~~~~~~ 240 (490)
T 2bc0_A 169 TLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL-------A-GYYDRDLTD 240 (490)
T ss_dssp SSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------T-TTSCHHHHH
T ss_pred ccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh-------h-hHHHHHHHH
Confidence 0 4458888888889999999999887642 1 125677888
Q ss_pred HHHHHHHhcCcEEEeeeeeccc--------cchhhhhcccCEEEEcCCCCCCCCC
Q psy12810 171 RRVKLLAAEGIEFKTNINVGKD--------IAAKELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 171 ~~~~~l~~~gv~i~~~~~v~~~--------~~~~~~~~~~D~vVlAtG~~~p~~~ 217 (276)
.+.+.+++.||++++++.+..- +..+..++++|.||+|+|.+ |+..
T Consensus 241 ~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vi~a~G~~-p~~~ 294 (490)
T 2bc0_A 241 LMAKNMEEHGIQLAFGETVKEVAGNGKVEKIITDKNEYDVDMVILAVGFR-PNTT 294 (490)
T ss_dssp HHHHHHHTTTCEEEETCCEEEEECSSSCCEEEESSCEEECSEEEECCCEE-ECCG
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEECCcEEECCEEEECCCCC-cChH
Confidence 8888899999999999876421 11122357899999999998 7653
No 145
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.19 E-value=3.7e-11 Score=103.87 Aligned_cols=152 Identities=16% Similarity=0.119 Sum_probs=100.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeec-----CCCCC--CCHHHHHHHHHHHHhCCCeEEecccc-----Cc
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYG-----IPTMK--LSKEVVQRRVKLLAAEGIEFKTNINV-----GK 110 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~-----~~~~~--~~~~~~~~~~~~l~~~gv~~~~~~~v-----~~ 110 (276)
+|||++||+. |+++|++|+|+|+. .+||.+.+. .|.+. ....+.+++.+.+.+.|++++.+... ..
T Consensus 25 G~aGl~aA~~-l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~ 102 (319)
T 3cty_A 25 GAAGFSAAVY-AARSGFSVAILDKA-VAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGVEVRSIKKTQG 102 (319)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESS-STTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETCCEEEEEEETT
T ss_pred CHHHHHHHHH-HHhCCCcEEEEeCC-CCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEeeEEEEEEeCC
Confidence 6999999999 89999999999994 689988543 23331 12456666777778888876542100 00
Q ss_pred -------------cchh---------------------------------------hhccCCCCCCCCCCCCcchhhhhC
Q psy12810 111 -------------DIAA---------------------------------------KVTNHTPQSDNQTKHCPPLIVNIV 138 (276)
Q Consensus 111 -------------~v~v---------------------------------------~iiG~gp~~~g~~Gl~~A~~l~~~ 138 (276)
+..+ .++|+|+. |++.|..|++.
T Consensus 103 ~~~v~~~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~-----g~e~a~~l~~~ 177 (319)
T 3cty_A 103 GFDIETNDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNS-----GAIAAISMSEY 177 (319)
T ss_dssp EEEEEESSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHH-----HHHHHHHHTTT
T ss_pred EEEEEECCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHH-----HHHHHHHHHhh
Confidence 0000 12333333 77888888889
Q ss_pred CcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c--------c----chhhhhcccC
Q psy12810 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D--------I----AAKELYEEFD 203 (276)
Q Consensus 139 G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~--------~----~~~~~~~~~D 203 (276)
|.+|+++++.+.+. ..+ .+.+.+.+.||++++++.+.. + . +++..++++|
T Consensus 178 g~~V~~i~~~~~~~-----------~~~----~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D 242 (319)
T 3cty_A 178 VKNVTIIEYMPKYM-----------CEN----AYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETD 242 (319)
T ss_dssp BSEEEEECSSSSCC-----------SCH----HHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCS
T ss_pred CCcEEEEEcCCccC-----------CCH----HHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecC
Confidence 99999999877541 122 234455678999999877641 1 0 1222358899
Q ss_pred EEEEcCCCCCCCCC
Q psy12810 204 ALLLCTGATWPRDL 217 (276)
Q Consensus 204 ~vVlAtG~~~p~~~ 217 (276)
.||+|+|.. |+..
T Consensus 243 ~vi~a~G~~-p~~~ 255 (319)
T 3cty_A 243 GVFIYVGLI-PQTS 255 (319)
T ss_dssp EEEECCCEE-ECCG
T ss_pred EEEEeeCCc-cChH
Confidence 999999998 7654
No 146
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.19 E-value=1.4e-11 Score=110.86 Aligned_cols=164 Identities=15% Similarity=0.105 Sum_probs=106.4
Q ss_pred ccchhchHHHHHhhCCCe--EEEeccCCCCCcee---eec-CCCCCCCHHHHHHHHHHHHhCCCeEEeccccC-------
Q psy12810 43 FTATLSYHISIQHLVGHS--VTVFERNDRVGGLL---QYG-IPTMKLSKEVVQRRVKLLAAEGIEFKTNINVG------- 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~--V~l~Ek~~~lGG~~---~~~-~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~------- 109 (276)
+|||++||.. ++++|++ |+|+|+++.++... ... ......+..+..+....+.+.++++++++++.
T Consensus 18 G~aGl~aA~~-L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~ 96 (415)
T 3lxd_A 18 GHGGAQAAIA-LRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVVSLDPAAH 96 (415)
T ss_dssp SHHHHHHHHH-HHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCEEEEETTTT
T ss_pred hHHHHHHHHH-HHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEEEEEECCCC
Confidence 6999999999 8999998 99999988766421 101 11111223333333456677888888773220
Q ss_pred -------ccc----hhhhccCCCCCC--------------------------------------CCCCCCcchhhhhCCc
Q psy12810 110 -------KDI----AAKVTNHTPQSD--------------------------------------NQTKHCPPLIVNIVGH 140 (276)
Q Consensus 110 -------~~v----~v~iiG~gp~~~--------------------------------------g~~Gl~~A~~l~~~G~ 140 (276)
..+ .+..+|+.|..+ |++|+++|..|++.|.
T Consensus 97 ~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~ 176 (415)
T 3lxd_A 97 TVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGV 176 (415)
T ss_dssp EEEETTSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEECCCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCC
Confidence 000 011123221110 3348888888999999
Q ss_pred EEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc---------c-chhhhhcccCEEEEcCC
Q psy12810 141 SVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD---------I-AAKELYEEFDALLLCTG 210 (276)
Q Consensus 141 ~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~---------~-~~~~~~~~~D~vVlAtG 210 (276)
+|+++++.+.+. . ...++++...+.+.+++.||++++++.+..- + ..+..++++|.||+|+|
T Consensus 177 ~Vtvv~~~~~~l---~-----~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G 248 (415)
T 3lxd_A 177 NVTLLEALPRVL---A-----RVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIG 248 (415)
T ss_dssp EEEEEESSSSTT---T-----TTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSC
T ss_pred eEEEEecCCchh---h-----hhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCC
Confidence 999999888642 1 1246777788888899999999999876411 1 11223688999999999
Q ss_pred CCCCCC
Q psy12810 211 ATWPRD 216 (276)
Q Consensus 211 ~~~p~~ 216 (276)
.+ |+.
T Consensus 249 ~~-p~~ 253 (415)
T 3lxd_A 249 IV-PCV 253 (415)
T ss_dssp CE-ESC
T ss_pred Cc-cCh
Confidence 98 765
No 147
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.17 E-value=3.3e-11 Score=104.70 Aligned_cols=159 Identities=18% Similarity=0.144 Sum_probs=100.6
Q ss_pred ccchhchHHHHHhhCCCeEEEecc----CCCCCceeeec-----CCCCC---CCHHHHHHHHHHHHhCCCeEEeccccC-
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFER----NDRVGGLLQYG-----IPTMK---LSKEVVQRRVKLLAAEGIEFKTNINVG- 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek----~~~lGG~~~~~-----~~~~~---~~~~~~~~~~~~l~~~gv~~~~~~~v~- 109 (276)
+|+|+++|+. |+++|++|+|+|+ ...+||.+.+. .|.+. ....+..++.+.+.+.|++++.++...
T Consensus 17 G~aGl~~A~~-l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i 95 (333)
T 1vdc_A 17 GPAAHTAAIY-AARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIFTETVTKV 95 (333)
T ss_dssp SHHHHHHHHH-HHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECCCCCEE
T ss_pred CHHHHHHHHH-HHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEEEeEEEEE
Confidence 6999999999 8999999999999 56789987543 23332 124667777788888899887663110
Q ss_pred ----c--cc-----------hhhhccCCCCCC----------------------------------------CCCCCCcc
Q psy12810 110 ----K--DI-----------AAKVTNHTPQSD----------------------------------------NQTKHCPP 132 (276)
Q Consensus 110 ----~--~v-----------~v~iiG~gp~~~----------------------------------------g~~Gl~~A 132 (276)
. .+ .+...|+.|..+ |.+|+++|
T Consensus 96 ~~~~~~~~v~~~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A 175 (333)
T 1vdc_A 96 DFSSKPFKLFTDSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEA 175 (333)
T ss_dssp ECSSSSEEEECSSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHH
T ss_pred EEcCCEEEEEECCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHH
Confidence 0 00 000112211100 23366667
Q ss_pred hhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c--------c------ch
Q psy12810 133 LIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D--------I------AA 195 (276)
Q Consensus 133 ~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~--------~------~~ 195 (276)
..|++.|.+|+++++.+.+. ..+.+. .+.+++.||++++++.+.. + + ++
T Consensus 176 ~~l~~~g~~V~lv~~~~~~~-----------~~~~~~---~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g 241 (333)
T 1vdc_A 176 NFLTKYGSKVYIIHRRDAFR-----------ASKIMQ---QRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTG 241 (333)
T ss_dssp HHHTTTSSEEEEECSSSSCC-----------SCHHHH---HHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTC
T ss_pred HHHHhcCCeEEEEecCCcCC-----------ccHHHH---HHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCC
Confidence 77777888888888877531 122221 1234568999999877641 0 1 11
Q ss_pred hhhhcccCEEEEcCCCCCCCCC
Q psy12810 196 KELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 196 ~~~~~~~D~vVlAtG~~~p~~~ 217 (276)
+..++++|.||+|+|.. |+..
T Consensus 242 ~~~~i~~D~vi~a~G~~-p~~~ 262 (333)
T 1vdc_A 242 DVSDLKVSGLFFAIGHE-PATK 262 (333)
T ss_dssp CEEEEECSEEEECSCEE-ESCG
T ss_pred ceEEEecCEEEEEeCCc-cchH
Confidence 22467899999999998 7654
No 148
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.16 E-value=4.3e-11 Score=104.31 Aligned_cols=160 Identities=17% Similarity=0.154 Sum_probs=103.3
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeec-----CCCCC---CCHHHHHHHHHHHHhCCCeEEecccc----Cc
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYG-----IPTMK---LSKEVVQRRVKLLAAEGIEFKTNINV----GK 110 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~-----~~~~~---~~~~~~~~~~~~l~~~gv~~~~~~~v----~~ 110 (276)
+|||++||+. |+++|++|+|||+. .+||.|.+. .|.+. ...++.+++.+.+.+.|++++.++.. ..
T Consensus 23 G~aGl~aA~~-l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~~~ 100 (335)
T 2a87_A 23 GPAGYTAALY-AARAQLAPLVFEGT-SFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMEDVESVSLHG 100 (335)
T ss_dssp HHHHHHHHHH-HHHTTCCCEEECCS-SCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCCEEEEECSS
T ss_pred CHHHHHHHHH-HHhCCCeEEEEecC-CCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEeeEEEEEeCC
Confidence 6999999999 89999999999986 699988653 23332 22566677777788888887765310 00
Q ss_pred c--c-------------hhhhccCCCCCC----------------------------------CCCCCCcchhhhhCCcE
Q psy12810 111 D--I-------------AAKVTNHTPQSD----------------------------------NQTKHCPPLIVNIVGHS 141 (276)
Q Consensus 111 ~--v-------------~v~iiG~gp~~~----------------------------------g~~Gl~~A~~l~~~G~~ 141 (276)
. + .+...|+.|..+ |.+|+++|..|++.|.+
T Consensus 101 ~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~ 180 (335)
T 2a87_A 101 PLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARS 180 (335)
T ss_dssp SSEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSE
T ss_pred cEEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCe
Confidence 0 0 000122211110 34578888889999999
Q ss_pred EEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c-----c------chhhhhcccCEEEE
Q psy12810 142 VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D-----I------AAKELYEEFDALLL 207 (276)
Q Consensus 142 Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~-----~------~~~~~~~~~D~vVl 207 (276)
|+++++.+.+. ..+.+. .+.+++.||++++++.+.. + + +++..++++|.||+
T Consensus 181 V~l~~~~~~~~-----------~~~~~~---~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2a87_A 181 VTLVHRRDEFR-----------ASKIML---DRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFV 246 (335)
T ss_dssp EEEECSSSSCS-----------SCTTHH---HHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEE
T ss_pred EEEEEcCCcCC-----------ccHHHH---HHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEE
Confidence 99999887641 111111 1234568999999887641 0 1 12224688999999
Q ss_pred cCCCCCCCCCCC
Q psy12810 208 CTGATWPRDLPI 219 (276)
Q Consensus 208 AtG~~~p~~~~i 219 (276)
|+|.. |+...+
T Consensus 247 a~G~~-p~~~~~ 257 (335)
T 2a87_A 247 AIGHE-PRSGLV 257 (335)
T ss_dssp CSCEE-ECCTTT
T ss_pred ccCCc-cChhHh
Confidence 99998 775443
No 149
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.15 E-value=2.1e-11 Score=110.80 Aligned_cols=164 Identities=20% Similarity=0.142 Sum_probs=105.6
Q ss_pred ccchhchHHHHHhhC--CCeEEEeccCCCCCceeeecCC-----CCC--CCHHHHHHHHHHHHhCCCeEEeccccC----
Q psy12810 43 FTATLSYHISIQHLV--GHSVTVFERNDRVGGLLQYGIP-----TMK--LSKEVVQRRVKLLAAEGIEFKTNINVG---- 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~--G~~V~l~Ek~~~lGG~~~~~~~-----~~~--~~~~~~~~~~~~l~~~gv~~~~~~~v~---- 109 (276)
+|||++||.. |+++ |++|+|+|+++.++.. ..+++ ... .+..+.....+.+++.|++++++..+.
T Consensus 9 G~aGl~aA~~-l~~~~~g~~V~lie~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~ 86 (452)
T 2cdu_A 9 THAGTFAVKQ-TIADHPDADVTAYEMNDNISFL-SCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQVTNVDP 86 (452)
T ss_dssp SHHHHHHHHH-HHHHCTTCEEEEEESSSCCCBC-GGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEEEEEEG
T ss_pred CHHHHHHHHH-HHhhCcCCcEEEEECCCCCCcc-cccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEEEEEEc
Confidence 6999999999 7887 9999999998766531 11111 111 122222222355667888886664321
Q ss_pred --ccc-------------h----hhhccCCCCCC-------------------------------------CCCCCCcch
Q psy12810 110 --KDI-------------A----AKVTNHTPQSD-------------------------------------NQTKHCPPL 133 (276)
Q Consensus 110 --~~v-------------~----v~iiG~gp~~~-------------------------------------g~~Gl~~A~ 133 (276)
+.+ . +..+|+.|..+ |++|+++|.
T Consensus 87 ~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~ 166 (452)
T 2cdu_A 87 ETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAE 166 (452)
T ss_dssp GGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHH
T ss_pred CCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHH
Confidence 000 0 00123211110 556888999
Q ss_pred hhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc---------cchhhhhcccCE
Q psy12810 134 IVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD---------IAAKELYEEFDA 204 (276)
Q Consensus 134 ~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~---------~~~~~~~~~~D~ 204 (276)
.|++.|.+|+++++.+.+. + ...++++...+.+.+++.||++++++.+..- +..+..++++|.
T Consensus 167 ~l~~~g~~Vtlv~~~~~~l-------~-~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~ 238 (452)
T 2cdu_A 167 AYSNQNYNVNLIDGHERVL-------Y-KYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDI 238 (452)
T ss_dssp HHHTTTCEEEEEESSSSTT-------T-TTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESE
T ss_pred HHHhcCCEEEEEEcCCchh-------h-hhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCE
Confidence 9999999999999988642 1 1256778888888899999999999876421 111223578999
Q ss_pred EEEcCCCCCCCCC
Q psy12810 205 LLLCTGATWPRDL 217 (276)
Q Consensus 205 vVlAtG~~~p~~~ 217 (276)
||+|+|.+ |+..
T Consensus 239 vv~a~G~~-p~~~ 250 (452)
T 2cdu_A 239 AILCIGFR-PNTE 250 (452)
T ss_dssp EEECCCEE-ECCG
T ss_pred EEECcCCC-CCHH
Confidence 99999998 7653
No 150
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.15 E-value=2.9e-11 Score=110.53 Aligned_cols=83 Identities=18% Similarity=0.106 Sum_probs=61.0
Q ss_pred CCCCCCcchhhhhC-CcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------c-c
Q psy12810 125 NQTKHCPPLIVNIV-GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD--------I-A 194 (276)
Q Consensus 125 g~~Gl~~A~~l~~~-G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~-~ 194 (276)
|++|+++|..|++. |.+|+++++.+.+. + ...++++...+.+.+++.||++++++.+..- + .
T Consensus 168 G~~g~e~A~~l~~~~g~~Vtlv~~~~~~l---~-----~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~ 239 (472)
T 3iwa_A 168 GFIGLEMAVSLADMWGIDTTVVELADQIM---P-----GFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVI 239 (472)
T ss_dssp SHHHHHHHHHHHHHHCCEEEEECSSSSSS---T-----TTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEE
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEccCccc---c-----cccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEE
Confidence 34477888888888 99999999887642 1 0246777788888899999999999776411 0 1
Q ss_pred hhhhhcccCEEEEcCCCCCCCC
Q psy12810 195 AKELYEEFDALLLCTGATWPRD 216 (276)
Q Consensus 195 ~~~~~~~~D~vVlAtG~~~p~~ 216 (276)
.+..++++|.||+|+|.+ |+.
T Consensus 240 ~~g~~i~aD~Vv~a~G~~-p~~ 260 (472)
T 3iwa_A 240 TDKRTLDADLVILAAGVS-PNT 260 (472)
T ss_dssp ESSCEEECSEEEECSCEE-ECC
T ss_pred eCCCEEEcCEEEECCCCC-cCH
Confidence 122368899999999998 764
No 151
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.15 E-value=1.2e-11 Score=115.48 Aligned_cols=82 Identities=15% Similarity=0.195 Sum_probs=61.7
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc-c----------
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD-I---------- 193 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~-~---------- 193 (276)
|.+|+++|..|++.|.+|+++++.+.+. + ..++++...+.+.+++.||++++++.+..- .
T Consensus 160 G~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------~--~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~ 230 (565)
T 3ntd_A 160 GFIGLEMMESLHHLGIKTTLLELADQVM-------T--PVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDA 230 (565)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSSSSC-------T--TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGG
T ss_pred CHHHHHHHHHHHhcCCcEEEEEcCCccc-------h--hcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccc
Confidence 4458888999999999999999988642 1 356777778888899999999998766411 0
Q ss_pred -----------------chhhhhcccCEEEEcCCCCCCCC
Q psy12810 194 -----------------AAKELYEEFDALLLCTGATWPRD 216 (276)
Q Consensus 194 -----------------~~~~~~~~~D~vVlAtG~~~p~~ 216 (276)
..+..++++|.||+|+|.+ |+.
T Consensus 231 ~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~-p~~ 269 (565)
T 3ntd_A 231 AGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVR-PET 269 (565)
T ss_dssp GTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEE-ECC
T ss_pred cccccccccCCCcEEEEEcCCCEEEcCEEEECcCCc-cch
Confidence 0112357899999999998 764
No 152
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.14 E-value=6.4e-12 Score=112.90 Aligned_cols=163 Identities=15% Similarity=0.135 Sum_probs=104.3
Q ss_pred ccchhchHHHHHhhCCCe--EEEeccCCCCCcee---eecC-CCCCCCHHHHHHHHHHHHhCCCeEEeccccC-------
Q psy12810 43 FTATLSYHISIQHLVGHS--VTVFERNDRVGGLL---QYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVG------- 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~--V~l~Ek~~~lGG~~---~~~~-~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~------- 109 (276)
+|||++||.. ++++|++ |+|+|+++.++..- .... .....+..+ .+..+.+++.|+++++++++.
T Consensus 11 G~AGl~aA~~-L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~~~v~~id~~~~ 88 (410)
T 3ef6_A 11 GVGGFTTAQA-LRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLTGPEVTALDVQTR 88 (410)
T ss_dssp SHHHHHHHHH-HHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEESCCEEEEETTTT
T ss_pred cHHHHHHHHH-HHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEeCCEEEEEECCCC
Confidence 6999999999 8999998 99999988766421 1000 000001111 122345567789988874320
Q ss_pred -------ccc----hhhhccCCCCCC-------------------------------------CCCCCCcchhhhhCCcE
Q psy12810 110 -------KDI----AAKVTNHTPQSD-------------------------------------NQTKHCPPLIVNIVGHS 141 (276)
Q Consensus 110 -------~~v----~v~iiG~gp~~~-------------------------------------g~~Gl~~A~~l~~~G~~ 141 (276)
..+ .+..+|+.|..+ |++|+++|..|++.|.+
T Consensus 89 ~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~ 168 (410)
T 3ef6_A 89 TISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLS 168 (410)
T ss_dssp EEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCe
Confidence 000 011123321110 45688999999999999
Q ss_pred EEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---c-----c-chhhhhcccCEEEEcCCCC
Q psy12810 142 VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---D-----I-AAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 142 Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~-----~-~~~~~~~~~D~vVlAtG~~ 212 (276)
|+++++.+.+. . ...++++...+.+.+++.||++++++.+.. + + ..+..++++|.||+|+|.+
T Consensus 169 Vtvv~~~~~~l---~-----~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 169 VTILEAGDELL---V-----RVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp EEEECSSSSSS---H-----HHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred EEEEecCCccc---h-----hhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 99999988642 1 013566777788888999999999987641 1 1 1123368899999999998
Q ss_pred CCCC
Q psy12810 213 WPRD 216 (276)
Q Consensus 213 ~p~~ 216 (276)
|+.
T Consensus 241 -p~~ 243 (410)
T 3ef6_A 241 -PAD 243 (410)
T ss_dssp -ECC
T ss_pred -ecH
Confidence 765
No 153
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.14 E-value=9e-11 Score=102.42 Aligned_cols=64 Identities=19% Similarity=0.155 Sum_probs=49.8
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeec--------------CCCCCCC---------HHHHHHHHHHHHhCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYG--------------IPTMKLS---------KEVVQRRVKLLAAEG 99 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~--------------~~~~~~~---------~~~~~~~~~~l~~~g 99 (276)
+|+|+++|.. |+++|++|+|+|+++.+||+|... .+.+..+ ..+.+++.+.+++.|
T Consensus 12 G~aGl~~A~~-l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (357)
T 4a9w_A 12 GQSGLSAGYF-LRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLAQYEQKYA 90 (357)
T ss_dssp SHHHHHHHHH-HHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHH-HHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHHHHHHHcC
Confidence 6999999999 899999999999999999997542 1221111 566777778888889
Q ss_pred CeEEeccc
Q psy12810 100 IEFKTNIN 107 (276)
Q Consensus 100 v~~~~~~~ 107 (276)
++++++++
T Consensus 91 ~~~~~~~~ 98 (357)
T 4a9w_A 91 LPVLRPIR 98 (357)
T ss_dssp CCEECSCC
T ss_pred CEEEcCCE
Confidence 99887754
No 154
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.13 E-value=6.2e-11 Score=105.42 Aligned_cols=162 Identities=12% Similarity=0.034 Sum_probs=103.7
Q ss_pred ccchhchHHHHHhhCC--CeEEEeccCCCCCceeee-----cCCCCCCCHHHHH-HHHHHHHhCCCeEEeccccC-----
Q psy12810 43 FTATLSYHISIQHLVG--HSVTVFERNDRVGGLLQY-----GIPTMKLSKEVVQ-RRVKLLAAEGIEFKTNINVG----- 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G--~~V~l~Ek~~~lGG~~~~-----~~~~~~~~~~~~~-~~~~~l~~~gv~~~~~~~v~----- 109 (276)
+|||++||.. |+++| ++|+|+|+++ |..... ..+....+..+.. .....+++.|++++++..+.
T Consensus 13 G~aGl~aA~~-l~~~g~~~~V~lie~~~--g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~ 89 (384)
T 2v3a_A 13 GLAGYNLARE-WRKLDGETPLLMITADD--GRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRVTGIDPG 89 (384)
T ss_dssp SHHHHHHHHH-HHTTCSSSCEEEECSSC--CCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGG
T ss_pred hHHHHHHHHH-HHhhCCCCCEEEEECCC--CCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECC
Confidence 6999999999 89999 5699999975 433221 1122222233322 23345567889888764321
Q ss_pred -ccc-----------hhhhccCCCCCC-------------------------------------CCCCCCcchhhhhCCc
Q psy12810 110 -KDI-----------AAKVTNHTPQSD-------------------------------------NQTKHCPPLIVNIVGH 140 (276)
Q Consensus 110 -~~v-----------~v~iiG~gp~~~-------------------------------------g~~Gl~~A~~l~~~G~ 140 (276)
+.+ .+..+|+.|..+ |++|+++|..|++.|.
T Consensus 90 ~~~v~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~ 169 (384)
T 2v3a_A 90 HQRIWIGEEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGY 169 (384)
T ss_dssp GTEEEETTEEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCEEEECCcEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCC
Confidence 000 010123211110 4458899999999999
Q ss_pred EEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------c-chhhhhcccCEEEEcCCC
Q psy12810 141 SVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD--------I-AAKELYEEFDALLLCTGA 211 (276)
Q Consensus 141 ~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~-~~~~~~~~~D~vVlAtG~ 211 (276)
+|+++++.+.+. + ...+.++...+.+.+++.|+++++++.+..- + ..+..++++|.||+|+|.
T Consensus 170 ~Vtlv~~~~~~~---~-----~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 170 QLDVVAPCEQVM---P-----GLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp EEEEEESSSSSS---T-----TTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred eEEEEecCcchh---h-----cccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCC
Confidence 999999988642 1 1236677788888899999999999876411 0 112235789999999999
Q ss_pred CCCCC
Q psy12810 212 TWPRD 216 (276)
Q Consensus 212 ~~p~~ 216 (276)
+ |+.
T Consensus 242 ~-p~~ 245 (384)
T 2v3a_A 242 R-PRT 245 (384)
T ss_dssp E-ECC
T ss_pred C-cCH
Confidence 8 765
No 155
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.13 E-value=2.1e-11 Score=109.19 Aligned_cols=163 Identities=12% Similarity=0.056 Sum_probs=102.2
Q ss_pred ccchhchHHHHHhhCCC--eEEEeccCCCCCcee---eecC-CCCCCCHHHHHHHHHHHHhCCCeEEecccc--------
Q psy12810 43 FTATLSYHISIQHLVGH--SVTVFERNDRVGGLL---QYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINV-------- 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~--~V~l~Ek~~~lGG~~---~~~~-~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v-------- 108 (276)
+|||++||.. |+++|+ +|+|||+++.++..- .... .....+..+..+..+.+.+.++++++ .++
T Consensus 10 G~aGl~aA~~-L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~~id~~~~ 87 (404)
T 3fg2_P 10 GHAGFQVAVS-LRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMVSIDREGR 87 (404)
T ss_dssp SHHHHHHHHH-HHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEEEEETTTT
T ss_pred hHHHHHHHHH-HHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEEEEECCCC
Confidence 6999999999 899999 899999988665321 0000 11111111112223445567777765 221
Q ss_pred ------Cc----cchhhhccCCCCCC-------------------------------------CCCCCCcchhhhhCCcE
Q psy12810 109 ------GK----DIAAKVTNHTPQSD-------------------------------------NQTKHCPPLIVNIVGHS 141 (276)
Q Consensus 109 ------~~----~v~v~iiG~gp~~~-------------------------------------g~~Gl~~A~~l~~~G~~ 141 (276)
+. +..+..+|+.|..+ |++|+++|..|++.|.+
T Consensus 88 ~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~ 167 (404)
T 3fg2_P 88 KLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLE 167 (404)
T ss_dssp EEEESSSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EEEECCCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCE
Confidence 00 00011122211100 44588999999999999
Q ss_pred EEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc---------c-chhhhhcccCEEEEcCCC
Q psy12810 142 VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD---------I-AAKELYEEFDALLLCTGA 211 (276)
Q Consensus 142 Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~---------~-~~~~~~~~~D~vVlAtG~ 211 (276)
|+++++.+.+. + ...++++...+.+.+++.||++++++.+..- + ..+..++++|.||+|+|.
T Consensus 168 Vtvv~~~~~~~-------~-~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 168 VDVVELAPRVM-------A-RVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp EEEECSSSSTT-------T-TTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred EEEEeCCCcch-------h-hccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 99999988642 1 1246777788888899999999999776411 1 112236889999999999
Q ss_pred CCCCC
Q psy12810 212 TWPRD 216 (276)
Q Consensus 212 ~~p~~ 216 (276)
+ |+.
T Consensus 240 ~-p~~ 243 (404)
T 3fg2_P 240 I-PNV 243 (404)
T ss_dssp E-ECC
T ss_pred c-cCH
Confidence 8 765
No 156
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.12 E-value=7.4e-11 Score=101.41 Aligned_cols=156 Identities=11% Similarity=0.068 Sum_probs=100.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee--cCCCC-----CCCHHHHHHHHHHHHhCCCeEEeccccC------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY--GIPTM-----KLSKEVVQRRVKLLAAEGIEFKTNINVG------ 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~--~~~~~-----~~~~~~~~~~~~~l~~~gv~~~~~~~v~------ 109 (276)
+|||++||.. |+++|++|+|+|+ .+||+|.. +++.+ .....+.+++.+.+++.|++++.++++.
T Consensus 10 G~aGl~aA~~-l~~~g~~v~li~~--~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~ 86 (310)
T 1fl2_A 10 GPAGAAAAIY-SARKGIRTGLMGE--RFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAA 86 (310)
T ss_dssp SHHHHHHHHH-HHTTTCCEEEECS--STTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCS
T ss_pred CHHHHHHHHH-HHHCCCcEEEEeC--CCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecc
Confidence 6999999999 8999999999987 48998853 22211 1124566777778888898888774320
Q ss_pred -------------ccch----hhhccCCCCCC----------------------------------CCCCCCcchhhhhC
Q psy12810 110 -------------KDIA----AKVTNHTPQSD----------------------------------NQTKHCPPLIVNIV 138 (276)
Q Consensus 110 -------------~~v~----v~iiG~gp~~~----------------------------------g~~Gl~~A~~l~~~ 138 (276)
..+. +...|+.|..+ |.+|+++|..|++.
T Consensus 87 ~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~ 166 (310)
T 1fl2_A 87 VEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGI 166 (310)
T ss_dssp STTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTT
T ss_pred cCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHh
Confidence 0000 00123211100 33477778888888
Q ss_pred CcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHh-cCcEEEeeeeecc---c--------c----chhhhhccc
Q psy12810 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAA-EGIEFKTNINVGK---D--------I----AAKELYEEF 202 (276)
Q Consensus 139 G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~-~gv~i~~~~~v~~---~--------~----~~~~~~~~~ 202 (276)
|.+|+++++.+.+. .++ .+.+.+.+ .||++++++.+.. + . +++..++++
T Consensus 167 g~~Vtlv~~~~~~~-----------~~~----~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~ 231 (310)
T 1fl2_A 167 VEHVTLLEFAPEMK-----------ADQ----VLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIEL 231 (310)
T ss_dssp BSEEEEECSSSSCC-----------SCH----HHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEEeCcccC-----------ccH----HHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEc
Confidence 89999999887641 222 23445566 6999999877641 1 0 112236789
Q ss_pred CEEEEcCCCCCCCCC
Q psy12810 203 DALLLCTGATWPRDL 217 (276)
Q Consensus 203 D~vVlAtG~~~p~~~ 217 (276)
|.||+|+|.. |+..
T Consensus 232 D~vi~a~G~~-p~~~ 245 (310)
T 1fl2_A 232 AGIFVQIGLL-PNTN 245 (310)
T ss_dssp SEEEECSCEE-ESCG
T ss_pred CEEEEeeCCc-cCch
Confidence 9999999998 7653
No 157
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.12 E-value=6.7e-12 Score=112.59 Aligned_cols=103 Identities=15% Similarity=0.052 Sum_probs=69.3
Q ss_pred hccCCCCCCCCCCCCcchhhhh---CCcEEEEEcCCCccceeee--ecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeec
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNI---VGHSVTVFERNDRVGGLLQ--YGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVG 190 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~---~G~~Vtvie~~~~~gg~~~--~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~ 190 (276)
|||+|++ |+++|..|++ .|++|+|||+++..+.... +.........++...+.+.+.+.|++++.++...
T Consensus 6 IIGgG~a-----Gl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~ 80 (409)
T 3h8l_A 6 VLGGRFG-----ALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEK 80 (409)
T ss_dssp EECSSHH-----HHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEEEE
T ss_pred EECCCHH-----HHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeEEE
Confidence 4999999 9999999999 8999999999997632111 1011111122233345556677899999884332
Q ss_pred cccc-------h---hhhhcccCEEEEcCCCCCCCCCCCCCcCC
Q psy12810 191 KDIA-------A---KELYEEFDALLLCTGATWPRDLPIPGRQL 224 (276)
Q Consensus 191 ~~~~-------~---~~~~~~~D~vVlAtG~~~p~~~~i~g~~~ 224 (276)
.+.. . ...++.||.||+|+|+. |+.+++||.+.
T Consensus 81 i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~-~~~~~ipG~~~ 123 (409)
T 3h8l_A 81 IDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAH-LATELVKGWDK 123 (409)
T ss_dssp EETTTTEEEEECTTSCEEEEECSEEEECCCCE-ECGGGSBTHHH
T ss_pred EeCCCCEEEEccCCcccceeeCCEEEECCCCC-cCccCCCChhh
Confidence 2111 1 11238899999999998 88888888763
No 158
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.12 E-value=1.3e-10 Score=98.99 Aligned_cols=150 Identities=15% Similarity=0.135 Sum_probs=96.2
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCcee--eecCCCC--CCCHHHHHHHHHHHHhC-CCeEEecccc---------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLL--QYGIPTM--KLSKEVVQRRVKLLAAE-GIEFKTNINV--------- 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~--~~~~~~~--~~~~~~~~~~~~~l~~~-gv~~~~~~~v--------- 108 (276)
+||||+||.. |+++|++|+|||+++..++.. .++.+.. ..+.++..++.+.+.+. ++++..+...
T Consensus 11 G~aGl~aA~~-l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~ 89 (297)
T 3fbs_A 11 SYAGLSAALQ-LGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEF 89 (297)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEE
T ss_pred CHHHHHHHHH-HHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeE
Confidence 6999999999 899999999999976444332 1223332 23367777788888776 6776433100
Q ss_pred ------Cc----cchh---------------------------------------hhccCCCCCCCCCCCCcchhhhhCC
Q psy12810 109 ------GK----DIAA---------------------------------------KVTNHTPQSDNQTKHCPPLIVNIVG 139 (276)
Q Consensus 109 ------~~----~v~v---------------------------------------~iiG~gp~~~g~~Gl~~A~~l~~~G 139 (276)
+. +..+ .++|+|+. |+++|..|++.|
T Consensus 90 ~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~-----~~e~a~~l~~~g 164 (297)
T 3fbs_A 90 IVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPM-----AIHHALMLPDWG 164 (297)
T ss_dssp EEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTT-----HHHHHHHGGGTS
T ss_pred EEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCcc-----HHHHHHHhhhcC
Confidence 00 0001 12333444 888888888888
Q ss_pred cEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc-c----c-chhhhhcccCEEEEcCCCCC
Q psy12810 140 HSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK-D----I-AAKELYEEFDALLLCTGATW 213 (276)
Q Consensus 140 ~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~-~----~-~~~~~~~~~D~vVlAtG~~~ 213 (276)
+|+++++.+. ..++ .+.+.+.+.||+++. +.+.. . + ..+..++++|.||+|+|..
T Consensus 165 -~v~~v~~~~~------------~~~~----~~~~~l~~~gv~i~~-~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~- 225 (297)
T 3fbs_A 165 -ETTFFTNGIV------------EPDA----DQHALLAARGVRVET-TRIREIAGHADVVLADGRSIALAGLFTQPKLR- 225 (297)
T ss_dssp -EEEEECTTTC------------CCCH----HHHHHHHHTTCEEEC-SCEEEEETTEEEEETTSCEEEESEEEECCEEE-
T ss_pred -cEEEEECCCC------------CCCH----HHHHHHHHCCcEEEc-ceeeeeecCCeEEeCCCCEEEEEEEEEccCcc-
Confidence 9999887664 1222 345667889999986 54431 1 1 1122367899999999998
Q ss_pred CCCC
Q psy12810 214 PRDL 217 (276)
Q Consensus 214 p~~~ 217 (276)
|+..
T Consensus 226 p~~~ 229 (297)
T 3fbs_A 226 ITVD 229 (297)
T ss_dssp CCCS
T ss_pred cCch
Confidence 7653
No 159
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.12 E-value=2.7e-11 Score=119.64 Aligned_cols=153 Identities=16% Similarity=0.088 Sum_probs=101.9
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeecCCC----CCCCHHHHHHHHHHHHhC-CCeEEeccccC--------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYGIPT----MKLSKEVVQRRVKLLAAE-GIEFKTNINVG-------- 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~~~~----~~~~~~~~~~~~~~l~~~-gv~~~~~~~v~-------- 109 (276)
+||||+||.. |+++|++|+|||+++.+||+|.. ++. .....++..+..+++.+. ++++++++.+.
T Consensus 137 GpAGl~AA~~-la~~G~~V~lie~~~~~GG~~~~-~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~ 214 (965)
T 2gag_A 137 GPAGLAAARE-ASRSGARVMLLDERAEAGGTLLD-TAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFGSYDANYL 214 (965)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSSGGGGG-SSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEEEETTTEE
T ss_pred CHHHHHHHHH-HHhCCCcEEEEeCCCCCCceecc-CCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeecCCce
Confidence 6999999999 89999999999999999999973 211 111245556666777775 88776543210
Q ss_pred --------------------c-------cchhhhccCCCCCC------------------------------------CC
Q psy12810 110 --------------------K-------DIAAKVTNHTPQSD------------------------------------NQ 126 (276)
Q Consensus 110 --------------------~-------~v~v~iiG~gp~~~------------------------------------g~ 126 (276)
. +..+..+|+.|..+ |.
T Consensus 215 ~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~vvViGgG~ 294 (965)
T 2gag_A 215 IAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGARIAVATTND 294 (965)
T ss_dssp EEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSSEEEEESST
T ss_pred eeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCeEEEEcCCH
Confidence 0 00011123211100 44
Q ss_pred CCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecccc------------c
Q psy12810 127 TKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI------------A 194 (276)
Q Consensus 127 ~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~------------~ 194 (276)
+|+++|..|++.|.+|+|+++.+.+. .. .+.+++.||++++++.+..-. .
T Consensus 295 ~g~E~A~~L~~~G~~Vtvv~~~~~~~-------------~~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~ 356 (965)
T 2gag_A 295 SAYELVRELAATGGVVAVIDARSSIS-------------AA-----AAQAVADGVQVISGSVVVDTEADENGELSAIVVA 356 (965)
T ss_dssp THHHHHHHHGGGTCCSEEEESCSSCC-------------HH-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHHHHHHcCCcEEEEECCCccc-------------hh-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEE
Confidence 58888889999999999999887641 11 455788899999998654110 1
Q ss_pred --------hhhhhcccCEEEEcCCCCCCCC
Q psy12810 195 --------AKELYEEFDALLLCTGATWPRD 216 (276)
Q Consensus 195 --------~~~~~~~~D~vVlAtG~~~p~~ 216 (276)
++..++++|.||+|+|.. |+.
T Consensus 357 ~~~~~~~~G~~~~i~~D~Vv~a~G~~-P~~ 385 (965)
T 2gag_A 357 ELDEARELGGTQRFEADVLAVAGGFN-PVV 385 (965)
T ss_dssp EECTTCCEEEEEEEECSEEEEECCEE-ECC
T ss_pred eccccCCCCceEEEEcCEEEECCCcC-cCh
Confidence 112568899999999998 775
No 160
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.11 E-value=3.3e-11 Score=113.11 Aligned_cols=162 Identities=14% Similarity=0.127 Sum_probs=104.4
Q ss_pred ccchhchHHHHHhhC--CCeEEEeccCCCCCceeeecC----CCC-CCCHH-HHHHHHHHHHhCCCeEEecccc------
Q psy12810 43 FTATLSYHISIQHLV--GHSVTVFERNDRVGGLLQYGI----PTM-KLSKE-VVQRRVKLLAAEGIEFKTNINV------ 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~~--G~~V~l~Ek~~~lGG~~~~~~----~~~-~~~~~-~~~~~~~~l~~~gv~~~~~~~v------ 108 (276)
+||||+||.. |+++ |++|+|||+++.+|- ...+. +.. ..... +..+.....++.|++++++.++
T Consensus 45 G~AGl~aA~~-L~~~~~g~~V~vie~~~~~~~-~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~V~~id~~ 122 (588)
T 3ics_A 45 VAGGASVAAR-LRRLSEEDEIIMVERGEYISF-ANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSEVVKINKE 122 (588)
T ss_dssp SHHHHHHHHH-HHHHCSSSEEEEECSSSCSSB-CGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEEEEEEETT
T ss_pred cHHHHHHHHH-HHhhCcCCCEEEEECCCCccc-cCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCEEEEEECC
Confidence 6999999999 7887 999999999987652 11111 111 11111 2233344455778887765432
Q ss_pred -----------Cc------cchhhhccCCCCCC----------------------------------------CCCCCCc
Q psy12810 109 -----------GK------DIAAKVTNHTPQSD----------------------------------------NQTKHCP 131 (276)
Q Consensus 109 -----------~~------~v~v~iiG~gp~~~----------------------------------------g~~Gl~~ 131 (276)
+. +..+..+|+.|..+ |++|+++
T Consensus 123 ~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~ 202 (588)
T 3ics_A 123 EKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEM 202 (588)
T ss_dssp TTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHH
T ss_pred CCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHH
Confidence 00 00111123321111 3457888
Q ss_pred chhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc-c------chhhhhcccCE
Q psy12810 132 PLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD-I------AAKELYEEFDA 204 (276)
Q Consensus 132 A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~-~------~~~~~~~~~D~ 204 (276)
|..|++.|.+|+++++.+.+. + ..+.++...+.+.+++.||++++++.+..- . ..+..++++|.
T Consensus 203 A~~l~~~g~~Vtlv~~~~~~l-------~--~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~ 273 (588)
T 3ics_A 203 VENLRERGIEVTLVEMANQVM-------P--PIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDM 273 (588)
T ss_dssp HHHHHHTTCEEEEECSSSSSC-------T--TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSE
T ss_pred HHHHHhCCCeEEEEecCCccc-------c--cCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCE
Confidence 888999999999999888642 1 356778888888899999999999876421 1 11223678999
Q ss_pred EEEcCCCCCCCC
Q psy12810 205 LLLCTGATWPRD 216 (276)
Q Consensus 205 vVlAtG~~~p~~ 216 (276)
||+|+|.+ |+.
T Consensus 274 Vi~a~G~~-p~~ 284 (588)
T 3ics_A 274 LILAIGVQ-PES 284 (588)
T ss_dssp EEECSCEE-ECC
T ss_pred EEEccCCC-CCh
Confidence 99999998 765
No 161
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.10 E-value=2.4e-11 Score=111.29 Aligned_cols=80 Identities=23% Similarity=0.219 Sum_probs=60.5
Q ss_pred CCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------cchhhh
Q psy12810 127 TKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD--------IAAKEL 198 (276)
Q Consensus 127 ~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~~~~~~ 198 (276)
+|+++|..|++.|.+|+++++.+.+.. ..++++...+.+.+++.||++++++.+..- +..+..
T Consensus 197 ~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~ 267 (480)
T 3cgb_A 197 IGLEMAETFVELGKKVRMIERNDHIGT---------IYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKG 267 (480)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGTTS---------SSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTE
T ss_pred HHHHHHHHHHhcCCeEEEEEeCCchhh---------cCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCC
Confidence 477788888899999999998876531 346777788888899999999998876411 111223
Q ss_pred hcccCEEEEcCCCCCCCC
Q psy12810 199 YEEFDALLLCTGATWPRD 216 (276)
Q Consensus 199 ~~~~D~vVlAtG~~~p~~ 216 (276)
++++|.||+|+|.+ |+.
T Consensus 268 ~i~~D~vi~a~G~~-p~~ 284 (480)
T 3cgb_A 268 TYKADLVLVSVGVK-PNT 284 (480)
T ss_dssp EEECSEEEECSCEE-ESC
T ss_pred EEEcCEEEECcCCC-cCh
Confidence 67899999999998 765
No 162
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.06 E-value=1.6e-10 Score=105.37 Aligned_cols=66 Identities=20% Similarity=0.241 Sum_probs=55.8
Q ss_pred ccchhchHHHHHhhCC--CeEEEeccCCCCCceeeecC-CCCCCCHHHHHHHHHHHHhCCCeEEeccccC
Q psy12810 43 FTATLSYHISIQHLVG--HSVTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVG 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G--~~V~l~Ek~~~lGG~~~~~~-~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 109 (276)
+|||++||.. ++++| ++|+|||+.+.+||.+++++ |.+.....+..++.+.+++.||+++++..++
T Consensus 15 G~aGl~aA~~-l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 83 (460)
T 1cjc_A 15 GPAGFYTAQH-LLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG 83 (460)
T ss_dssp SHHHHHHHHH-HHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT
T ss_pred CHHHHHHHHH-HHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe
Confidence 6999999999 78888 99999999999999999987 5555556777888888888999999875543
No 163
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.03 E-value=2.5e-10 Score=105.65 Aligned_cols=156 Identities=10% Similarity=0.070 Sum_probs=101.3
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee--cCCC-----CCCCHHHHHHHHHHHHhCCCeEEeccccC------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY--GIPT-----MKLSKEVVQRRVKLLAAEGIEFKTNINVG------ 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~--~~~~-----~~~~~~~~~~~~~~l~~~gv~~~~~~~v~------ 109 (276)
+|||++||+. |+++|++|+|+|+ .+||++.. +++. +.....+..++.+.+++.|++++.++++.
T Consensus 221 G~AGl~aA~~-la~~G~~v~lie~--~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~ 297 (521)
T 1hyu_A 221 GPAGAAAAVY-SARKGIRTGLMGE--RFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAA 297 (521)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECS--STTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCS
T ss_pred cHHHHHHHHH-HHhCCCeEEEEEC--CCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEecc
Confidence 6999999999 8999999999997 48998852 2221 11235666777788888898887773320
Q ss_pred -----ccch------------hhhccCCCCCC----------------------------------CCCCCCcchhhhhC
Q psy12810 110 -----KDIA------------AKVTNHTPQSD----------------------------------NQTKHCPPLIVNIV 138 (276)
Q Consensus 110 -----~~v~------------v~iiG~gp~~~----------------------------------g~~Gl~~A~~l~~~ 138 (276)
..+. +...|+.|..+ |.+|+++|..|++.
T Consensus 298 ~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~ 377 (521)
T 1hyu_A 298 TEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGI 377 (521)
T ss_dssp STTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhh
Confidence 0000 00123211100 34477778888888
Q ss_pred CcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHh-cCcEEEeeeeecc---c--------c----chhhhhccc
Q psy12810 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAA-EGIEFKTNINVGK---D--------I----AAKELYEEF 202 (276)
Q Consensus 139 G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~-~gv~i~~~~~v~~---~--------~----~~~~~~~~~ 202 (276)
|.+|+++++.+.+. .++ .+.+.+.+ .||++++++.+.. + . +++..++++
T Consensus 378 g~~Vtlv~~~~~l~-----------~~~----~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~ 442 (521)
T 1hyu_A 378 VEHVTLLEFAPEMK-----------ADQ----VLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVAL 442 (521)
T ss_dssp BSEEEEECSSSSCC-----------SCH----HHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEEeCcccC-----------cCH----HHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEc
Confidence 89999998877641 122 34455666 5999999877641 0 0 122235789
Q ss_pred CEEEEcCCCCCCCCC
Q psy12810 203 DALLLCTGATWPRDL 217 (276)
Q Consensus 203 D~vVlAtG~~~p~~~ 217 (276)
|.||+|+|.. |+..
T Consensus 443 D~vi~a~G~~-pn~~ 456 (521)
T 1hyu_A 443 AGIFVQIGLL-PNTH 456 (521)
T ss_dssp SEEEECCCEE-ESCG
T ss_pred CEEEECcCCC-CCch
Confidence 9999999998 7753
No 164
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.02 E-value=4.6e-10 Score=102.41 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=30.8
Q ss_pred ccchhchHHHHHhh---CCCe---EEEeccCCCCCceeee
Q psy12810 43 FTATLSYHISIQHL---VGHS---VTVFERNDRVGGLLQY 76 (276)
Q Consensus 43 ~paGl~aA~~~aa~---~G~~---V~l~Ek~~~lGG~~~~ 76 (276)
+|||++||.. |++ .|++ |+|||+++.+||+|.+
T Consensus 11 G~aGl~aA~~-L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 11 GPSGMAQLRA-FQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp SHHHHHHHHH-HHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred cHHHHHHHHH-HHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 6999999999 888 9999 9999999899999976
No 165
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.01 E-value=2.5e-10 Score=103.12 Aligned_cols=83 Identities=14% Similarity=0.081 Sum_probs=61.4
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc-cc---c------
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK-DI---A------ 194 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~-~~---~------ 194 (276)
|++|+++|..|++.|.+|+++++.+.+. + ...++++...+.+.+++.||++++++.+.. .. +
T Consensus 158 G~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------~-~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v 229 (431)
T 1q1r_A 158 GYIGLEVAATAIKANMHVTLLDTAARVL-------E-RVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAV 229 (431)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSSSTT-------T-TTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEE
T ss_pred CHHHHHHHHHHHhCCCEEEEEEeCCccc-------c-chhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEE
Confidence 4458889999999999999999887642 1 125667777788888999999999976641 11 0
Q ss_pred --hhhhhcccCEEEEcCCCCCCCC
Q psy12810 195 --AKELYEEFDALLLCTGATWPRD 216 (276)
Q Consensus 195 --~~~~~~~~D~vVlAtG~~~p~~ 216 (276)
.+..++++|.||+|+|.+ |+.
T Consensus 230 ~~~~G~~i~~D~Vv~a~G~~-p~~ 252 (431)
T 1q1r_A 230 LCEDGTRLPADLVIAGIGLI-PNC 252 (431)
T ss_dssp EETTSCEEECSEEEECCCEE-ECC
T ss_pred EeCCCCEEEcCEEEECCCCC-cCc
Confidence 112357899999999998 764
No 166
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.98 E-value=4.9e-10 Score=101.99 Aligned_cols=65 Identities=18% Similarity=0.134 Sum_probs=54.6
Q ss_pred ccchhchHHHHHhh-C------CCeEEEeccCCCCCceeeecC-CCCCCCHHHHHHHHHHHHhCCCeEEecccc
Q psy12810 43 FTATLSYHISIQHL-V------GHSVTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINV 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~-~------G~~V~l~Ek~~~lGG~~~~~~-~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v 108 (276)
+|||++||.. +++ . |++|+|||+.+.+||++++++ |.....+++..++.+.+++.|++++.+..+
T Consensus 12 G~aGl~aA~~-L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v~v 84 (456)
T 1lqt_A 12 GPSAFFAAAS-LLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVV 84 (456)
T ss_dssp SHHHHHHHHH-HHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESCCB
T ss_pred CHHHHHHHHH-HHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeEEE
Confidence 6999999999 777 6 999999999988999999997 555555677778888888889999877554
No 167
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.97 E-value=5.6e-10 Score=95.94 Aligned_cols=151 Identities=9% Similarity=0.008 Sum_probs=90.0
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeecCCCCC-----CCHHHHHHHHHHHHhCC-CeEEecccc--------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYGIPTMK-----LSKEVVQRRVKLLAAEG-IEFKTNINV-------- 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~~~~~~-----~~~~~~~~~~~~l~~~g-v~~~~~~~v-------- 108 (276)
+||||+||+. |+++|++|+|||++. .||++....|.+. .+.++.+...+++.+.+ +.+..+..+
T Consensus 15 GpAGlsAA~~-lar~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (304)
T 4fk1_A 15 GPAGLNASLV-LGRARKQIALFDNNT-NRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTG 92 (304)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEECSC-CGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTS
T ss_pred CHHHHHHHHH-HHHCCCCEEEEeCCC-CCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCC
Confidence 6999999999 899999999999964 7887643333322 23555566666666654 333322110
Q ss_pred --------Cccc----hhhhccCCCCCC-----------------------------------CCCCCCcchhhhhCCcE
Q psy12810 109 --------GKDI----AAKVTNHTPQSD-----------------------------------NQTKHCPPLIVNIVGHS 141 (276)
Q Consensus 109 --------~~~v----~v~iiG~gp~~~-----------------------------------g~~Gl~~A~~l~~~G~~ 141 (276)
+..+ .+..+|+.|..| +++++++|..+++.|.+
T Consensus 93 ~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~ 172 (304)
T 4fk1_A 93 LFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTD 172 (304)
T ss_dssp CEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSC
T ss_pred cEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCce
Confidence 1111 111235433222 12345667777777888
Q ss_pred EEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------c-chhhhhcccCEEEEcCCCC
Q psy12810 142 VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD--------I-AAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 142 Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~-~~~~~~~~~D~vVlAtG~~ 212 (276)
|+++++.+.+ .+ ...+.+.+.|+++++++..... + ..+..++++|.+|+++|..
T Consensus 173 v~i~~~~~~~-------------~~----~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~ 235 (304)
T 4fk1_A 173 LVIATNGNEL-------------SQ----TIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFF 235 (304)
T ss_dssp EEEECSSCCC-------------CH----HHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEE
T ss_pred EEEEeccccc-------------hh----hhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeeccc
Confidence 8887765532 22 3445677889998887532211 1 1223457789999988876
No 168
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.96 E-value=6e-10 Score=99.93 Aligned_cols=83 Identities=13% Similarity=0.141 Sum_probs=62.7
Q ss_pred CCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc----c-chhhhh
Q psy12810 125 NQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD----I-AAKELY 199 (276)
Q Consensus 125 g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~----~-~~~~~~ 199 (276)
|++|+++|..|++.|.+|+++++.+.+. + ...++++...+.+.+++.||++++++.+..- + ..+..+
T Consensus 154 G~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------~-~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~ 225 (408)
T 2gqw_A 154 GVIGLELAATARTAGVHVSLVETQPRLM-------S-RAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTR 225 (408)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSSSSS-------T-TTSCHHHHHHHHHHHHHTTCEEEESCCEEEEETTEEEETTSCE
T ss_pred CHHHHHHHHHHHhCCCEEEEEEeCCccc-------c-cccCHHHHHHHHHHHHHcCcEEEeCCEEEEEECCEEEECCCCE
Confidence 4558888999999999999999988642 1 0256777778888899999999999876421 1 112236
Q ss_pred cccCEEEEcCCCCCCCC
Q psy12810 200 EEFDALLLCTGATWPRD 216 (276)
Q Consensus 200 ~~~D~vVlAtG~~~p~~ 216 (276)
+++|.||+|+|.+ |+.
T Consensus 226 i~~D~vi~a~G~~-p~~ 241 (408)
T 2gqw_A 226 IAADMVVVGIGVL-AND 241 (408)
T ss_dssp EECSEEEECSCEE-ECC
T ss_pred EEcCEEEECcCCC-ccH
Confidence 7899999999998 764
No 169
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.94 E-value=1.6e-11 Score=110.86 Aligned_cols=144 Identities=16% Similarity=0.038 Sum_probs=82.7
Q ss_pred hccCCCCCCCCCCCCcchhhhh--CCcEEEEEcCCCccceeeee--cCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNI--VGHSVTVFERNDRVGGLLQY--GIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK 191 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~--~G~~Vtvie~~~~~gg~~~~--~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 191 (276)
|||+|++ |+++|..|++ .|++|+|||+++..+..... -........++...+.+.+++.|++++.++....
T Consensus 7 IIGgG~a-----Gl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (430)
T 3h28_A 7 VIGGGVG-----GIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp EECSSHH-----HHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred EECccHH-----HHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEEEEEE
Confidence 4999999 9999999999 88999999999876421100 0000001111111223445668999987643322
Q ss_pred ccc------hhhhhcccCEEEEcCCCCCCCCCCCCCcC-CCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCCh
Q psy12810 192 DIA------AKELYEEFDALLLCTGATWPRDLPIPGRQ-LSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGD 264 (276)
Q Consensus 192 ~~~------~~~~~~~~D~vVlAtG~~~p~~~~i~g~~-~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~ 264 (276)
+.. .+..++.||+||+|+|+. |+.+.+.... ...+.+..+..+..+.... ...+++++|||+|.
T Consensus 82 d~~~~~v~~~~g~~i~~d~liiAtG~~-~~~pg~~~~g~~~~~~~~~~a~~~~~~~~~--------~~~~~~~vVVGgG~ 152 (430)
T 3h28_A 82 DPDANTVTTQSGKKIEYDYLVIATGPK-LVFGAEGQEENSTSICTAEHALETQKKLQE--------LYANPGPVVIGAIP 152 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCE-EECCSBTHHHHSCCCSSHHHHHHHHHHHHH--------HHHSCCCEEEEECT
T ss_pred ECCCCEEEECCCcEEECCEEEEcCCcc-cccCCCCCcCCccCcCCHHHHHHHHHHHHH--------HHhcCCeEEEEcCC
Confidence 211 122357899999999998 7655332101 1234444443333222211 12245678999986
Q ss_pred HH------HHHHHHh
Q psy12810 265 TG------CDCIATS 273 (276)
Q Consensus 265 ~G------~E~A~~~ 273 (276)
+| +|+|..+
T Consensus 153 ~~~~~G~~~E~a~~l 167 (430)
T 3h28_A 153 GVSCFGPAYEFALML 167 (430)
T ss_dssp TCCCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHH
Confidence 64 8887544
No 170
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.92 E-value=9.5e-10 Score=102.12 Aligned_cols=107 Identities=15% Similarity=0.141 Sum_probs=72.4
Q ss_pred ccchhchHHHHHh-hCCCeEEEeccCCCCCceeeec-CCCC---------------------CC------CHHHHHHHHH
Q psy12810 43 FTATLSYHISIQH-LVGHSVTVFERNDRVGGLLQYG-IPTM---------------------KL------SKEVVQRRVK 93 (276)
Q Consensus 43 ~paGl~aA~~~aa-~~G~~V~l~Ek~~~lGG~~~~~-~~~~---------------------~~------~~~~~~~~~~ 93 (276)
+|||+++|.. |+ +.|++|+|+|+++.+||+|... .|.. .+ ..++.++...
T Consensus 17 G~aGl~aA~~-L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~ 95 (540)
T 3gwf_A 17 GFGGIYAVHK-LHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPEILEYLED 95 (540)
T ss_dssp SHHHHHHHHH-HHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHHHHHHHHH
Confidence 6999999999 78 9999999999999999988532 1111 11 1345666667
Q ss_pred HHHhCCC--eEEeccccC------------------c----cchhhhccC--CCCCC-----------------------
Q psy12810 94 LLAAEGI--EFKTNINVG------------------K----DIAAKVTNH--TPQSD----------------------- 124 (276)
Q Consensus 94 ~l~~~gv--~~~~~~~v~------------------~----~v~v~iiG~--gp~~~----------------------- 124 (276)
..++.|+ ++++++++. . +..+...|. .|..|
T Consensus 96 ~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~ 175 (540)
T 3gwf_A 96 VVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKS 175 (540)
T ss_dssp HHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEEEEGGGCCSSCC
T ss_pred HHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCCEEEeecCCCccc
Confidence 7777887 666664320 0 011111231 11111
Q ss_pred -----------CCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 125 -----------NQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 125 -----------g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
|.+|+++|..|++.|.+|+++++.+.
T Consensus 176 ~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 176 LAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 55688899999999999999999886
No 171
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.90 E-value=6e-12 Score=113.76 Aligned_cols=132 Identities=19% Similarity=0.159 Sum_probs=76.1
Q ss_pred hhccCCCCCCCCCCCCcchhhhhCC--cEEEEEcCCCccceeeeecCCC----CCCcHHHHHHHHHHHHhcCcEEEeeee
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIVG--HSVTVFERNDRVGGLLQYGIPT----MKLSKEVVQRRVKLLAAEGIEFKTNIN 188 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~G--~~Vtvie~~~~~gg~~~~~~~~----~~~~~~~~~~~~~~l~~~gv~i~~~~~ 188 (276)
.|||+|++ |+.+|..|++.+ .+|||||++++.. +...++. ....+++...+.+.+++.||+++.++.
T Consensus 6 vIIGgG~a-----Gl~aA~~L~~~~~~~~VtlI~~~~~~~--~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v 78 (430)
T 3hyw_A 6 VVIGGGVG-----GIATAYNLRNLMPDLKITLISDRPYFG--FTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKA 78 (430)
T ss_dssp EEECSSHH-----HHHHHHHHHHHCTTCEEEEECSSSEEE--CGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCE
T ss_pred EEECCCHH-----HHHHHHHHhccCcCCeEEEEcCCCCCc--cCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEE
Confidence 34999999 999999999865 7899999998642 1100000 000111111122345677999988865
Q ss_pred eccccc------hhhhhcccCEEEEcCCCCCCCCCCCCCcCC--CCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEE
Q psy12810 189 VGKDIA------AKELYEEFDALLLCTGATWPRDLPIPGRQL--SGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260 (276)
Q Consensus 189 v~~~~~------~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~--~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVI 260 (276)
...+.+ .+..+++||+||+|||++ +. +++||.+. ..+.+..+..+..+.+.. ...++.++|+
T Consensus 79 ~~Id~~~~~V~~~~g~~i~YD~LViAtG~~-~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~--------~~~~~~~vv~ 148 (430)
T 3hyw_A 79 ESIDPDANTVTTQSGKKIEYDYLVIATGPK-LV-FGAEGQEENSTSICTAEHALETQKKLQE--------LYANPGPVVI 148 (430)
T ss_dssp EEEETTTTEEEETTCCEEECSEEEECCCCE-EE-CCSBTHHHHSCCCSSHHHHHHHHHHHHH--------HHHSCCCEEE
T ss_pred EEEECCCCEEEECCCCEEECCEEEEeCCCC-cc-CCccCcccCcCCcccHHHHHHHHHHHHh--------hccCCceEEE
Confidence 433321 223468999999999987 53 56777642 334444443333332211 1234455666
Q ss_pred cCC
Q psy12810 261 GGG 263 (276)
Q Consensus 261 GgG 263 (276)
||+
T Consensus 149 gg~ 151 (430)
T 3hyw_A 149 GAI 151 (430)
T ss_dssp EEC
T ss_pred eCC
Confidence 655
No 172
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.79 E-value=1.3e-08 Score=94.58 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=30.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY 76 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~ 76 (276)
++||+.+|.. |++.|++|+|+|+++.+||+|..
T Consensus 18 G~aGl~aA~~-L~~~g~~v~iiE~~~~~GGtw~~ 50 (545)
T 3uox_A 18 GVTGIYQAFL-INQAGMKVLGIEAGEDVGGTWYW 50 (545)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCTHHHH
T ss_pred cHHHHHHHHH-HHhCCCCEEEEeCCCCCCCcccc
Confidence 6999999999 89999999999999999999853
No 173
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.78 E-value=3.4e-09 Score=96.34 Aligned_cols=28 Identities=7% Similarity=0.077 Sum_probs=26.3
Q ss_pred ccchhchHHHHHhhCC-----CeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVG-----HSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G-----~~V~l~Ek~~~lG 71 (276)
+||||+||.. |+++| ++|+|||+++.+|
T Consensus 39 G~aGl~aA~~-L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 39 GPSNIALAIA-LQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp SHHHHHHHHH-HHHHHHHHCCCCEEEEESCSSCC
T ss_pred CHHHHHHHHH-HHhcccccCcccEEEEecCCCCC
Confidence 6999999999 89999 9999999998877
No 174
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.78 E-value=1.5e-09 Score=100.00 Aligned_cols=85 Identities=16% Similarity=0.094 Sum_probs=63.1
Q ss_pred hccCCCCCCCCCCCCcchhhhhC--------------CcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCc
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIV--------------GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGI 181 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~--------------G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv 181 (276)
++|+|+. |+|+|..|++. ..+|+++|+.+++. | .+++++.+...+.+++.||
T Consensus 222 VvGgG~t-----GvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il-------~--~~~~~~~~~~~~~L~~~GV 287 (502)
T 4g6h_A 222 VVGGGPT-----GVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL-------N--MFEKKLSSYAQSHLENTSI 287 (502)
T ss_dssp EECCSHH-----HHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS-------T--TSCHHHHHHHHHHHHHTTC
T ss_pred EECCCcc-----hhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc-------c--CCCHHHHHHHHHHHHhcce
Confidence 4566666 89988877653 36799999998752 2 4678888888999999999
Q ss_pred EEEeeeeecccc-----------ch--hhhhcccCEEEEcCCCCCCC
Q psy12810 182 EFKTNINVGKDI-----------AA--KELYEEFDALLLCTGATWPR 215 (276)
Q Consensus 182 ~i~~~~~v~~~~-----------~~--~~~~~~~D~vVlAtG~~~p~ 215 (276)
++++++.+..-. ++ .+.++++|.||.|+|.. |+
T Consensus 288 ~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~-~~ 333 (502)
T 4g6h_A 288 KVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNK-AR 333 (502)
T ss_dssp EEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEE-CC
T ss_pred eeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCc-CC
Confidence 999999875210 01 12358999999999987 54
No 175
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.77 E-value=8e-10 Score=98.65 Aligned_cols=106 Identities=16% Similarity=0.127 Sum_probs=68.0
Q ss_pred CccchhhhccCCCCCCCCCCCCcchhhhhCC--cEEEEEcCCCccce--eeeecCCCCCCcHHHHHHHHHHHHhcCcEEE
Q psy12810 109 GKDIAAKVTNHTPQSDNQTKHCPPLIVNIVG--HSVTVFERNDRVGG--LLQYGIPTMKLSKEVVQRRVKLLAAEGIEFK 184 (276)
Q Consensus 109 ~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G--~~Vtvie~~~~~gg--~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~ 184 (276)
+|++.| ||+|++ |+.+|..|++.+ .+|||||+++.... .+..-.. ...+.+......+.+.+.|++++
T Consensus 2 GKkVvI--IG~G~A-----G~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~-g~~~~~~~~~~~~~~~~~gv~~i 73 (401)
T 3vrd_B 2 GRKVVV--VGGGTG-----GATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIG-GDRELASLRVGYDGLRAHGIQVV 73 (401)
T ss_dssp CCEEEE--ECCSHH-----HHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHH-TSSCGGGGEECSHHHHHTTCEEE
T ss_pred cCEEEE--ECCcHH-----HHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhc-CCCCHHHHhhCHHHHHHCCCEEE
Confidence 566666 999999 999999998866 58999999886321 0000000 00010101111244567899998
Q ss_pred eeeeecccc------chhhhhcccCEEEEcCCCCCCCCCCCCCcC
Q psy12810 185 TNINVGKDI------AAKELYEEFDALLLCTGATWPRDLPIPGRQ 223 (276)
Q Consensus 185 ~~~~v~~~~------~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~ 223 (276)
.++....+. ..+..++.||+||+|||+. ++.+++||.+
T Consensus 74 ~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~-~~~~~i~G~~ 117 (401)
T 3vrd_B 74 HDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGID-LLYDKIEGYS 117 (401)
T ss_dssp CSCEEEEETTTTEEEETTSCEEECSEEEECCCEE-ECGGGSBTCC
T ss_pred EeEEEEEEccCcEEEecccceeecceeeeccCCc-cccCCccCch
Confidence 886544332 1223468999999999998 8888888865
No 176
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.75 E-value=2.4e-09 Score=95.86 Aligned_cols=71 Identities=21% Similarity=0.208 Sum_probs=49.7
Q ss_pred hhhhCC----cEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc-c---c-chhhhhcccCE
Q psy12810 134 IVNIVG----HSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK-D---I-AAKELYEEFDA 204 (276)
Q Consensus 134 ~l~~~G----~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~-~---~-~~~~~~~~~D~ 204 (276)
.+++.| .+|+++++.+.+ + ..++++...+.+.+++.||++++++.+.. + + ..+..++++|.
T Consensus 192 ~l~~~g~~~~~~v~~~~~~~~l--------~--~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~ 261 (409)
T 3h8l_A 192 YFKKKGMLDKVHVTVFSPGEYL--------S--DLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADI 261 (409)
T ss_dssp HHHTTTCTTTEEEEEECSSSSS--------T--TBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSE
T ss_pred HHHHcCCCCCeEEEEEeCCccc--------c--ccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeE
Confidence 445666 378888876621 1 34567777888889999999999987642 1 1 11234689999
Q ss_pred EEEcCCCCCCC
Q psy12810 205 LLLCTGATWPR 215 (276)
Q Consensus 205 vVlAtG~~~p~ 215 (276)
||+|+|.. |+
T Consensus 262 vi~a~G~~-~~ 271 (409)
T 3h8l_A 262 TILLPPYT-GN 271 (409)
T ss_dssp EEEECCEE-CC
T ss_pred EEECCCCC-cc
Confidence 99999987 54
No 177
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.75 E-value=7.8e-09 Score=96.14 Aligned_cols=32 Identities=28% Similarity=0.209 Sum_probs=30.1
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
++||+.+|.. |++.|++|+|||+++.+||+|.
T Consensus 30 G~aGl~aA~~-L~~~G~~v~iiE~~~~~GGtw~ 61 (549)
T 4ap3_A 30 GIAGLYAIHR-FRSQGLTVRAFEAASGVGGVWY 61 (549)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCTHHH
T ss_pred hHHHHHHHHH-HHhCCCCEEEEeCCCCCCCccc
Confidence 6999999999 8999999999999999999885
No 178
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.73 E-value=1.5e-08 Score=91.87 Aligned_cols=34 Identities=26% Similarity=0.286 Sum_probs=31.3
Q ss_pred ccchhchHHHHHhhCCC--eEEEeccCCCCCceeeec
Q psy12810 43 FTATLSYHISIQHLVGH--SVTVFERNDRVGGLLQYG 77 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~--~V~l~Ek~~~lGG~~~~~ 77 (276)
+|+|++||.. |++.|+ +|+|||+++.+||+|.+.
T Consensus 15 G~aGl~aA~~-L~~~G~~~~V~v~E~~~~~GG~~~~~ 50 (447)
T 2gv8_A 15 GPSGLVTAKA-LLAEKAFDQVTLFERRGSPGGVWNYT 50 (447)
T ss_dssp SHHHHHHHHH-HHTTTCCSEEEEECSSSSSSTTCSCC
T ss_pred cHHHHHHHHH-HHhcCCCCCeEEEecCCCCCCeecCC
Confidence 6999999999 899999 999999998899998764
No 179
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.72 E-value=9.5e-10 Score=99.25 Aligned_cols=78 Identities=12% Similarity=0.111 Sum_probs=51.0
Q ss_pred CCcc----hhhhhCC----cEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------
Q psy12810 129 HCPP----LIVNIVG----HSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD-------- 192 (276)
Q Consensus 129 l~~A----~~l~~~G----~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~-------- 192 (276)
++.| ..+++.| .+|+++++.+.++. .+++. . .+....+.+.+++.||++++++.+..-
T Consensus 161 ~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~---~~l~~--~-~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~v~~~ 234 (430)
T 3h28_A 161 YEFALMLHYELKKRGIRYKVPMTFITSEPYLGH---FGVGG--I-GASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYE 234 (430)
T ss_dssp HHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTC---TTTTC--S-TTHHHHHHHHHHHTTCEEECSCEEEEECSSEEEEE
T ss_pred HHHHHHHHHHHHHcCCccceEEEEecCCccccc---cccCc--c-hHHHHHHHHHHHHCCCEEEeCCEEEEEeCCeEEEE
Confidence 5555 4555667 47999998886541 11111 1 124456667788999999999877521
Q ss_pred -cchhhhhcccCEEEEcCCCC
Q psy12810 193 -IAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 193 -~~~~~~~~~~D~vVlAtG~~ 212 (276)
..++..++++|.||+|+|..
T Consensus 235 ~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 235 DLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp CTTSCEEEEECSEEEEECEEE
T ss_pred ecCCCceEEeeeEEEECCCCc
Confidence 11224568999999999986
No 180
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.63 E-value=1.1e-08 Score=93.93 Aligned_cols=84 Identities=14% Similarity=0.059 Sum_probs=59.3
Q ss_pred CCCCCCcchhhhh----CCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------
Q psy12810 125 NQTKHCPPLIVNI----VGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD-------- 192 (276)
Q Consensus 125 g~~Gl~~A~~l~~----~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~-------- 192 (276)
|++|+++|..|++ .|.+|+++++.+.+. . ..+++++...+.+.+++.||++++++.+..-
T Consensus 189 G~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~---~-----~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~ 260 (493)
T 1m6i_A 189 GFLGSELACALGRKARALGTEVIQLFPEKGNM---G-----KILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLL 260 (493)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT---T-----TTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEE
T ss_pred CHHHHHHHHHHHhhhhhcCCEEEEEecCcccc---c-----ccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEE
Confidence 4458888888766 478899998776421 0 1245677777888899999999999876421
Q ss_pred c-chhhhhcccCEEEEcCCCCCCCCC
Q psy12810 193 I-AAKELYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 193 ~-~~~~~~~~~D~vVlAtG~~~p~~~ 217 (276)
+ ..+..++++|.||+|+|.+ |+..
T Consensus 261 v~l~dG~~i~aD~Vv~a~G~~-pn~~ 285 (493)
T 1m6i_A 261 IKLKDGRKVETDHIVAAVGLE-PNVE 285 (493)
T ss_dssp EEETTSCEEEESEEEECCCEE-ECCT
T ss_pred EEECCCCEEECCEEEECCCCC-ccHH
Confidence 0 1122368899999999998 7753
No 181
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.62 E-value=9.8e-10 Score=95.48 Aligned_cols=84 Identities=17% Similarity=0.093 Sum_probs=53.5
Q ss_pred cceeeccccchhcccc-------ccccccc---ccchhchHHHHHhh--CCCeEEEeccCCCCCceeeecCCCCCCCHHH
Q psy12810 20 EPVLSGKVPRIDLEYT-------INNECRA---FTATLSYHISIQHL--VGHSVTVFERNDRVGGLLQYGIPTMKLSKEV 87 (276)
Q Consensus 20 ~~~~~~~~~~~~~~~~-------~~~~~~~---~paGl~aA~~~aa~--~G~~V~l~Ek~~~lGG~~~~~~~~~~~~~~~ 87 (276)
.||.+..++|.-.+.. .+.++-. +||||+||++ |++ .|++|+||||++.+||+|.++ .+..++..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~DV~IIGaGPAGlsAA~~-la~~r~G~~V~viEk~~~~GG~~~~~--~~~~~~~~ 117 (326)
T 3fpz_A 41 APIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYV-IAKNRPDLKVCIIESSVAPGGGSWLG--GQLFSAMV 117 (326)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHH-HHHHCTTSCEEEECSSSSCCTTTTCC--STTCCCEE
T ss_pred CCccHHHHHHHHHHHHHhhhhhccCCCEEEECCCHHHHHHHHH-HHHhCCCCeEEEEECCCCCCceEEeC--CccCCHHH
Confidence 5666666666543321 1233333 7999999999 654 599999999999999998765 22233222
Q ss_pred HHHH-HHHHHhCCCeEEecc
Q psy12810 88 VQRR-VKLLAAEGIEFKTNI 106 (276)
Q Consensus 88 ~~~~-~~~l~~~gv~~~~~~ 106 (276)
++.. ...+++.|+++..+.
T Consensus 118 l~~~~~~~~~e~Gv~~~~~~ 137 (326)
T 3fpz_A 118 MRKPAHLFLQELEIPYEDEG 137 (326)
T ss_dssp EETTTHHHHHHTTCCCEECS
T ss_pred HHHHHHHHHHHcCCEEEECC
Confidence 2111 234567788877663
No 182
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.61 E-value=9.1e-09 Score=92.98 Aligned_cols=162 Identities=19% Similarity=0.131 Sum_probs=94.1
Q ss_pred ccchhchHHHHHhh---CCCeEEEeccCCCCCceee--ecCCCCCCCHHHHHHHHHHHHhCCCeEEecccc---------
Q psy12810 43 FTATLSYHISIQHL---VGHSVTVFERNDRVGGLLQ--YGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV--------- 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~---~G~~V~l~Ek~~~lGG~~~--~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v--------- 108 (276)
+|||++||.. +++ .|++|||+|+++.....-. +.......+.++...+.+.+++.||++..+...
T Consensus 13 G~aGl~aA~~-L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V 91 (437)
T 3sx6_A 13 GTGGMPAAYE-MKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNI 91 (437)
T ss_dssp STTHHHHHHH-HHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEEEEETTTTEE
T ss_pred cHHHHHHHHH-HhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEE
Confidence 6999999999 787 8999999999874321100 000122223344444456677788887644100
Q ss_pred ----Cc----cchh-----------------------------------------------hhccCCCCCCCCCC--CCc
Q psy12810 109 ----GK----DIAA-----------------------------------------------KVTNHTPQSDNQTK--HCP 131 (276)
Q Consensus 109 ----~~----~v~v-----------------------------------------------~iiG~gp~~~g~~G--l~~ 131 (276)
+. +..+ .++|+|+. .+.+| ++.
T Consensus 92 ~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~-~g~~G~~~E~ 170 (437)
T 3sx6_A 92 TLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAG-ASCFGPAYEY 170 (437)
T ss_dssp EETTSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTT-CCCCHHHHHH
T ss_pred EECCCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCC-CCcCcHHHHH
Confidence 00 0000 12333332 01223 555
Q ss_pred c----hhhhhCCcE-----EEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc-c-----cc--
Q psy12810 132 P----LIVNIVGHS-----VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK-D-----IA-- 194 (276)
Q Consensus 132 A----~~l~~~G~~-----Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~-~-----~~-- 194 (276)
| ..+++.|.+ |+++++.+.++. .+++.. .+....+.+.+++.||++++++.+.. + ..
T Consensus 171 a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~---~~l~~~---~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~ 244 (437)
T 3sx6_A 171 AMIVASDLKKRGMRDKIPSFTFITSEPYIGH---LGIQGV---GDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQV 244 (437)
T ss_dssp HHHHHHHHHHTTCGGGCSCEEEEESSSSTTC---TTTTCC---TTHHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHcCCcccCcEEEEEcCCccccc---cccCcc---hHHHHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEec
Confidence 5 556677764 999998887542 112211 12445666778899999999987651 0 01
Q ss_pred ---hh---hhhcccCEEEEcCCCC
Q psy12810 195 ---AK---ELYEEFDALLLCTGAT 212 (276)
Q Consensus 195 ---~~---~~~~~~D~vVlAtG~~ 212 (276)
++ ..++++|.+++++|..
T Consensus 245 ~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 245 DEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp CTTSCEEEEEEEECSEEEEECCEE
T ss_pred ccCCccccceEEEEeEEEEcCCCc
Confidence 11 3468999999999865
No 183
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.58 E-value=4.8e-09 Score=93.86 Aligned_cols=95 Identities=14% Similarity=0.167 Sum_probs=66.5
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee-----------eecC----------------------
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL-----------QYGI---------------------- 159 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~-----------~~~~---------------------- 159 (276)
.+.|||+|++ |+.+|..|++.|.+|+|+|+.+.+|+.+ +.+.
T Consensus 6 dViIIGgG~a-----Gl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (401)
T 2gqf_A 6 ENIIIGAGAA-----GLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTN 80 (401)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCH
T ss_pred CEEEECCcHH-----HHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCH
Confidence 3445999999 9999999999999999999988663211 1000
Q ss_pred ------------CC--------CC--CcHHHHHHHHHHHHhcCcEEEeeeeecc---c---------cchhhhhcccCEE
Q psy12810 160 ------------PT--------MK--LSKEVVQRRVKLLAAEGIEFKTNINVGK---D---------IAAKELYEEFDAL 205 (276)
Q Consensus 160 ------------~~--------~~--~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~---------~~~~~~~~~~D~v 205 (276)
+. ++ ...++...+.+.+++.|+++++++.++. + +..+..++.+|.|
T Consensus 81 ~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g~i~ad~V 160 (401)
T 2gqf_A 81 WDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNSTQWQCKNL 160 (401)
T ss_dssp HHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTEEEEESEE
T ss_pred HHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCCEEECCEE
Confidence 00 00 2355666777788888999999987631 1 1111125789999
Q ss_pred EEcCCCC
Q psy12810 206 LLCTGAT 212 (276)
Q Consensus 206 VlAtG~~ 212 (276)
|+|+|..
T Consensus 161 VlAtG~~ 167 (401)
T 2gqf_A 161 IVATGGL 167 (401)
T ss_dssp EECCCCS
T ss_pred EECCCCc
Confidence 9999998
No 184
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.57 E-value=2.5e-08 Score=78.79 Aligned_cols=95 Identities=21% Similarity=0.205 Sum_probs=67.2
Q ss_pred hhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcccee--ee---ecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeee
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGL--LQ---YGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~--~~---~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v 189 (276)
.|+|+|++ |+++|..|++.|.+|+++|+.+..-.. +. .+.|....+.++...+.+.+++.|++++++ .+
T Consensus 5 vIIGgG~~-----Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v 78 (180)
T 2ywl_A 5 IVVGGGPS-----GLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VV 78 (180)
T ss_dssp EEECCSHH-----HHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CC
T ss_pred EEECCCHH-----HHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EE
Confidence 35999999 999999999999999999998743100 00 011111235677888888899999999998 65
Q ss_pred cc-c-------cchhhhhcccCEEEEcCCCCCCCC
Q psy12810 190 GK-D-------IAAKELYEEFDALLLCTGATWPRD 216 (276)
Q Consensus 190 ~~-~-------~~~~~~~~~~D~vVlAtG~~~p~~ 216 (276)
.. + +..+..++++|.||+|+|.+ |+.
T Consensus 79 ~~i~~~~~~~~v~~~~g~i~ad~vI~A~G~~-~~~ 112 (180)
T 2ywl_A 79 KGVRDMGGVFEVETEEGVEKAERLLLCTHKD-PTL 112 (180)
T ss_dssp CEEEECSSSEEEECSSCEEEEEEEEECCTTC-CHH
T ss_pred EEEEEcCCEEEEEECCCEEEECEEEECCCCC-CCc
Confidence 41 1 11111267899999999998 743
No 185
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.54 E-value=3.7e-11 Score=104.51 Aligned_cols=135 Identities=13% Similarity=0.066 Sum_probs=81.3
Q ss_pred ccchhhhccCCCCCCCCCCCCcchhhh--hCCcEEEEEcCCCccceeeeecCCCCCCcHHHH-HHHHHHHHhcCcEEEee
Q psy12810 110 KDIAAKVTNHTPQSDNQTKHCPPLIVN--IVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVV-QRRVKLLAAEGIEFKTN 186 (276)
Q Consensus 110 ~~v~v~iiG~gp~~~g~~Gl~~A~~l~--~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~-~~~~~~l~~~gv~i~~~ 186 (276)
.|+.| ||+||+ |+++|.+|+ +.|++|+|||+.+.+||.+.++- +..++..+ ....+.+++.|+++..+
T Consensus 66 ~DV~I--IGaGPA-----GlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~--~~~~~~~l~~~~~~~~~e~Gv~~~~~ 136 (326)
T 3fpz_A 66 SDVII--VGAGSS-----GLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGG--QLFSAMVMRKPAHLFLQELEIPYEDE 136 (326)
T ss_dssp ESEEE--ECCSHH-----HHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCS--TTCCCEEEETTTHHHHHHTTCCCEEC
T ss_pred CCEEE--ECCCHH-----HHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCC--ccCCHHHHHHHHHHHHHHcCCEEEEC
Confidence 44444 999999 999999996 46999999999999998765431 11111111 12234456789888766
Q ss_pred eeeccccchhhhhcccCEEEEcCCCCCCCCCCCCCcCCCCeeehHHHHHHHHHhhcCCCCCCCCCCCCCeEEEEcCChHH
Q psy12810 187 INVGKDIAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTG 266 (276)
Q Consensus 187 ~~v~~~~~~~~~~~~~D~vVlAtG~~~p~~~~i~g~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~~~~k~vvVIGgG~~G 266 (276)
.... ...+.++++++.. ++.+.++|.+........+++.. . .....+++++|||+|+++
T Consensus 137 ~~~~---------~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~------~-----~~~~~~~~v~viggg~~a 195 (326)
T 3fpz_A 137 GDYV---------VVKHAALFISTVL-SKVLQLPNVKLFNATCVEDLVTR------P-----PTEKGEVTVAGVVTNWTL 195 (326)
T ss_dssp SSEE---------EESCHHHHHHHHH-HHHHTSTTEEEETTEEEEEEEEE------S-----SCSSSSCEEEEEEEEEHH
T ss_pred Ccce---------ecceeEEEEcchh-hhccccccceeecccccceeecc------C-----CcccCCCEEEEEccCcee
Confidence 4322 1223334445544 55556666543221111111100 0 013678999999999999
Q ss_pred HHHHHHhh
Q psy12810 267 CDCIATSL 274 (276)
Q Consensus 267 ~E~A~~~~ 274 (276)
+|.|..+.
T Consensus 196 v~~a~~~~ 203 (326)
T 3fpz_A 196 VTQAHGTQ 203 (326)
T ss_dssp HHTCTTSS
T ss_pred eehhhhhh
Confidence 99876544
No 186
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.46 E-value=6.9e-08 Score=90.24 Aligned_cols=66 Identities=12% Similarity=0.114 Sum_probs=51.0
Q ss_pred HHHhhhhhhccccccceeeccccchhccccccc----------------------------cccc---ccchhchHHHHH
Q psy12810 6 QLEKRLDNTLIQECEPVLSGKVPRIDLEYTINN----------------------------ECRA---FTATLSYHISIQ 54 (276)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~---~paGl~aA~~~a 54 (276)
+| ..|.+.+.+ .|+.+...+++..+.+... ++-. +||||+||+. |
T Consensus 70 ~C-~~Ch~~~~~--~~~~c~~ch~~~~d~p~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~aG~~aa~~-~ 145 (572)
T 1d4d_A 70 AC-TSCHKGHEK--SVAYCDACHSFGFDMPFGGKWERKFVPVDADKAAQDKAIAAGVKETTDVVIIGSGGAGLAAAVS-A 145 (572)
T ss_dssp CG-GGTSCSSSC--CCCGGGGTCCCCCCCTTCCCCCCCCCCTTSSHHHHHHHHHSCCCEECSEEEECCSHHHHHHHHH-H
T ss_pred Cc-ccccccccC--CCCcccccccccccCCCccccccCCccccccHHHHHHHhhccCCCCCCEEEECCCHHHHHHHHH-H
Confidence 68 999999988 7888888888754432100 1111 5999999999 8
Q ss_pred hhCCCeEEEeccCCCCCceee
Q psy12810 55 HLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 55 a~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+++|++|+|+||.+.+||...
T Consensus 146 ~~~g~~v~~~e~~~~~~~~~~ 166 (572)
T 1d4d_A 146 RDAGAKVILLEKEPIPGGNTK 166 (572)
T ss_dssp HSSSCCEEEECSSSSSCTTGG
T ss_pred HHCCCcEEEEecCCCCCcchh
Confidence 999999999999998888653
No 187
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.45 E-value=1.2e-07 Score=87.05 Aligned_cols=150 Identities=17% Similarity=0.117 Sum_probs=88.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeecC---CCCC-CCHHHHHHHHHHHHhCCCeEEeccccC---------
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYGI---PTMK-LSKEVVQRRVKLLAAEGIEFKTNINVG--------- 109 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~~---~~~~-~~~~~~~~~~~~l~~~gv~~~~~~~v~--------- 109 (276)
+||||+||+. |+++ ++|+|||+++.+||++.+.. ..+. ...++..++.+++ +.+++++++..+.
T Consensus 117 G~aGl~aA~~-L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~ 193 (493)
T 1y56_A 117 GPAGIGAALE-LQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYF 193 (493)
T ss_dssp SHHHHHHHHH-HTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSE
T ss_pred cHHHHHHHHH-HHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEE
Confidence 6999999999 8888 99999999999999885432 1111 2244555555555 6688887665431
Q ss_pred -------c-------cchhhhccCCCCCCCCCCCCc-----ch---hhh-----hCCcEEEEEcCCCccceeeeecCCCC
Q psy12810 110 -------K-------DIAAKVTNHTPQSDNQTKHCP-----PL---IVN-----IVGHSVTVFERNDRVGGLLQYGIPTM 162 (276)
Q Consensus 110 -------~-------~v~v~iiG~gp~~~g~~Gl~~-----A~---~l~-----~~G~~Vtvie~~~~~gg~~~~~~~~~ 162 (276)
. +..+...|+.|..+.+-|... +. .+. ..+.+|.|+..+.. |
T Consensus 194 ~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~-g---------- 262 (493)
T 1y56_A 194 LVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGSKAD-E---------- 262 (493)
T ss_dssp EEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTSTTEEEHHHHHHHHHTSCBCSCSEEEEESTTHH-H----------
T ss_pred EEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCCCCEEEcHHHHHHHHhcccCCCCEEEEECCCHH-H----------
Confidence 0 011112354443322222221 11 111 23466777643221 1
Q ss_pred CCcHHHHHHHHHHHHhcCcEEEeeeeeccc--------c-chhhhhcccCEEEEcCCCCCCCC
Q psy12810 163 KLSKEVVQRRVKLLAAEGIEFKTNINVGKD--------I-AAKELYEEFDALLLCTGATWPRD 216 (276)
Q Consensus 163 ~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~-~~~~~~~~~D~vVlAtG~~~p~~ 216 (276)
+.+.+++.||++++++.+..- + ..+..++++|.||+|+|.+ |+.
T Consensus 263 ---------le~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~-p~~ 315 (493)
T 1y56_A 263 ---------VIQELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRR-PDI 315 (493)
T ss_dssp ---------HHHHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEE-ECC
T ss_pred ---------HHHHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcC-cCc
Confidence 115577889999999866411 0 1123468999999999998 765
No 188
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.41 E-value=1.6e-08 Score=91.31 Aligned_cols=69 Identities=12% Similarity=0.059 Sum_probs=45.4
Q ss_pred cEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecc---------ccchhhhhcccCEEEEcCC
Q psy12810 140 HSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK---------DIAAKELYEEFDALLLCTG 210 (276)
Q Consensus 140 ~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~---------~~~~~~~~~~~D~vVlAtG 210 (276)
.+|++++..+.++.... .......+.+.+.+++.||++++++.+.. +.+++..++++|.+++++|
T Consensus 180 v~v~~~~~~~~l~~~~~------~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G 253 (430)
T 3hyw_A 180 VPMTFITSEPYLGHFGV------GGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPS 253 (430)
T ss_dssp CCEEEECSSSSTTCTTT------TCSTTHHHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECE
T ss_pred ceeeeecccchhhhccc------hhhHHHHHHHHHHHHhCCeEEEeCceEEEEeCCceEEEeeCCCceEeecceEEEecc
Confidence 46788887765431111 12333445566778899999999988752 1233345789999999999
Q ss_pred CCCCC
Q psy12810 211 ATWPR 215 (276)
Q Consensus 211 ~~~p~ 215 (276)
.+ |+
T Consensus 254 ~~-~~ 257 (430)
T 3hyw_A 254 FQ-GP 257 (430)
T ss_dssp EE-CC
T ss_pred CC-Cc
Confidence 87 43
No 189
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.32 E-value=2.5e-07 Score=84.99 Aligned_cols=103 Identities=11% Similarity=0.053 Sum_probs=71.8
Q ss_pred cchh---HHHhhhhhhccccccceeeccccchhccccc----c------------c-----cccc-----ccchhchHHH
Q psy12810 2 IWDH---QLEKRLDNTLIQECEPVLSGKVPRIDLEYTI----N------------N-----ECRA-----FTATLSYHIS 52 (276)
Q Consensus 2 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------------~-----~~~~-----~paGl~aA~~ 52 (276)
||+| +|+..|.+ .++ .||.|..++++.+.... . . .... +|+||++|..
T Consensus 34 vc~~~~~l~~~~g~~-~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~ 110 (497)
T 2bry_A 34 VLSSFQGLCRALGVE-SGG--GLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVE 110 (497)
T ss_dssp HHHHHHHHHHHHTCC-TTC--HHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-CCC--CcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHH
Confidence 7999 89999999 466 79999988887654221 0 0 0011 5999999999
Q ss_pred HHhhCCCeEEEeccCCCCCceeeecC-C----------------CCC------CC-HHHHHHHHHHHHhCCCeEEecccc
Q psy12810 53 IQHLVGHSVTVFERNDRVGGLLQYGI-P----------------TMK------LS-KEVVQRRVKLLAAEGIEFKTNINV 108 (276)
Q Consensus 53 ~aa~~G~~V~l~Ek~~~lGG~~~~~~-~----------------~~~------~~-~~~~~~~~~~l~~~gv~~~~~~~v 108 (276)
|++.|++|+|+||++.+|+.....+ | .+. .+ ..+.+.+.+.+++.|+++++++.+
T Consensus 111 -La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v 189 (497)
T 2bry_A 111 -LALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKF 189 (497)
T ss_dssp -HHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEE
T ss_pred -HHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEE
Confidence 8999999999999988876422221 1 000 01 445566667778889999988654
No 190
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.27 E-value=6.1e-07 Score=82.40 Aligned_cols=101 Identities=14% Similarity=0.148 Sum_probs=69.3
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCC-----------------C------CC-cHHH
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPT-----------------M------KL-SKEV 168 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~-----------------~------~~-~~~~ 168 (276)
.+.|||+||+ |+++|..|++.|.+|+|||+.+.+|+........ + .. ..++
T Consensus 94 dVvIVGgG~a-----Gl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l 168 (497)
T 2bry_A 94 KCLVVGAGPC-----GLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQL 168 (497)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHH
T ss_pred CEEEECccHH-----HHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHH
Confidence 3445999999 9999999999999999999998765431111100 0 01 1455
Q ss_pred HHHHHHHHHhcCcEEEeeeeec---cc----------c----chhhhhcccCEEEEcCCCCCCCCCCC
Q psy12810 169 VQRRVKLLAAEGIEFKTNINVG---KD----------I----AAKELYEEFDALLLCTGATWPRDLPI 219 (276)
Q Consensus 169 ~~~~~~~l~~~gv~i~~~~~v~---~~----------~----~~~~~~~~~D~vVlAtG~~~p~~~~i 219 (276)
...+.+.+.+.|+++++++.|. .+ . +++..++.+|.||+|+|.. +....+
T Consensus 169 ~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~-S~~r~~ 235 (497)
T 2bry_A 169 QLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGK-FVPEGF 235 (497)
T ss_dssp HHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTT-CCCTTC
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCC-cccccc
Confidence 5667777788899999998764 10 1 1112468899999999998 544333
No 191
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.25 E-value=5.5e-07 Score=76.55 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=64.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhC-CcEEEEEcCCCccce-eeee--------------------cCCCC--------C
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIV-GHSVTVFERNDRVGG-LLQY--------------------GIPTM--------K 163 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~-G~~Vtvie~~~~~gg-~~~~--------------------~~~~~--------~ 163 (276)
+.|||+|++ |+++|..|++. |.+|+|+|+.+.+++ .|.. +++.. .
T Consensus 42 VvIIGgG~a-----Gl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 116 (284)
T 1rp0_A 42 VVVVGAGSA-----GLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVK 116 (284)
T ss_dssp EEEECCSHH-----HHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEES
T ss_pred EEEECccHH-----HHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEec
Confidence 445999999 99999999997 999999999987753 2211 11110 0
Q ss_pred CcHHHHHHHHHHHHh-cCcEEEeeeeecc---c--------cc-------------hhhhhcccCEEEEcCCCC
Q psy12810 164 LSKEVVQRRVKLLAA-EGIEFKTNINVGK---D--------IA-------------AKELYEEFDALLLCTGAT 212 (276)
Q Consensus 164 ~~~~~~~~~~~~l~~-~gv~i~~~~~v~~---~--------~~-------------~~~~~~~~D~vVlAtG~~ 212 (276)
...++...+.+.+.+ .|+++++++.+.. + .. ++..++.+|.||+|+|..
T Consensus 117 ~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred CHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 234555566666665 6999999987641 0 00 011457899999999976
No 192
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.21 E-value=3.3e-07 Score=82.31 Aligned_cols=95 Identities=11% Similarity=0.247 Sum_probs=66.8
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee--------e--e-cC---------CCC----------
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL--------Q--Y-GI---------PTM---------- 162 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~--------~--~-~~---------~~~---------- 162 (276)
.+.|||+|++ |+.+|..|++.|.+|+|+|+.+.+|+.+ + . .. +.+
T Consensus 29 dViIIGgG~A-----Gl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 29 DVVIIGAGAA-----GMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp CEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH
Confidence 3445999999 9999999999999999999998764321 0 0 00 000
Q ss_pred -------------------------CCcHHHHHHHHHHHHhcCcEEEeeeeecc-c-------cchhhhhcccCEEEEcC
Q psy12810 163 -------------------------KLSKEVVQRRVKLLAAEGIEFKTNINVGK-D-------IAAKELYEEFDALLLCT 209 (276)
Q Consensus 163 -------------------------~~~~~~~~~~~~~l~~~gv~i~~~~~v~~-~-------~~~~~~~~~~D~vVlAt 209 (276)
....++.+.+.+.+++.|+++++++.|.. . +.....++.+|.||+|+
T Consensus 104 ~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g~i~ad~VIlAt 183 (417)
T 3v76_A 104 QDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAGTVDAASLVVAS 183 (417)
T ss_dssp HHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTEEEEESEEEECC
T ss_pred HHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCcEEEeeEEEECC
Confidence 01235666677778888999999987651 0 11112268899999999
Q ss_pred CCC
Q psy12810 210 GAT 212 (276)
Q Consensus 210 G~~ 212 (276)
|..
T Consensus 184 G~~ 186 (417)
T 3v76_A 184 GGK 186 (417)
T ss_dssp CCS
T ss_pred CCc
Confidence 987
No 193
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.20 E-value=5.6e-07 Score=74.16 Aligned_cols=101 Identities=9% Similarity=-0.028 Sum_probs=64.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeee-cCCCC--------------CCcHHHHHHHHHHHHh
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQY-GIPTM--------------KLSKEVVQRRVKLLAA 178 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~-~~~~~--------------~~~~~~~~~~~~~l~~ 178 (276)
+.|||+|++ |+++|..|++.|.+|+|||+.....|.+.. ..... +....+...+.+.+++
T Consensus 6 VvVVGgG~a-----Gl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~ 80 (232)
T 2cul_A 6 VLIVGAGFS-----GAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEG 80 (232)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHT
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHc
Confidence 445999999 999999999999999999998433222110 00000 0123455666777877
Q ss_pred c-CcEEEeeeeecc-c--------c-chhhhhcccCEEEEcCCCCCCCCCCCCC
Q psy12810 179 E-GIEFKTNINVGK-D--------I-AAKELYEEFDALLLCTGATWPRDLPIPG 221 (276)
Q Consensus 179 ~-gv~i~~~~~v~~-~--------~-~~~~~~~~~D~vVlAtG~~~p~~~~i~g 221 (276)
. |++++. +.++. . + ..+..++.+|.||+|+|.+ ++....+|
T Consensus 81 ~~gv~i~~-~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~-s~~~~~~G 132 (232)
T 2cul_A 81 LRPLHLFQ-ATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSF-LGARLFLG 132 (232)
T ss_dssp CTTEEEEE-CCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTC-SSCEEEET
T ss_pred CCCcEEEE-eEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC-hhhceecC
Confidence 6 999884 44431 0 1 1122368899999999997 44433334
No 194
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.13 E-value=4.1e-06 Score=73.00 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=35.5
Q ss_pred cHHHHHHHHHHHHhcCcEEEeeeeecc---c------cc---hhhhhcccCEEEEcCCCC
Q psy12810 165 SKEVVQRRVKLLAAEGIEFKTNINVGK---D------IA---AKELYEEFDALLLCTGAT 212 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv~i~~~~~v~~---~------~~---~~~~~~~~D~vVlAtG~~ 212 (276)
+..+...+.+.+++.|+++++++.|.. + +. ++..++.+|.||+|+|.+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~ 208 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLH 208 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcc
Confidence 456777888888999999999987751 1 11 111368899999999986
No 195
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.09 E-value=3.8e-06 Score=69.11 Aligned_cols=62 Identities=23% Similarity=0.249 Sum_probs=46.2
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee----------ecCCCCCCCHHHHHHHHHHHHhCCCeEEec
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ----------YGIPTMKLSKEVVQRRVKLLAAEGIEFKTN 105 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~----------~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~ 105 (276)
+||||+||+. |+++|++|+||||++.+||.+. +|++.+.............+...+......
T Consensus 11 GpaGL~aA~~-La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 3kkj_A 11 GIAGLSAAQA-LTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred CHHHHHHHHH-HHHCCCCEEEEECCCCCCCcccccccCCceeecCccccccCcHHHHHHHHHHHhcccccccc
Confidence 6999999999 8999999999999999999763 345555555555555555555556554443
No 196
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.06 E-value=1.2e-06 Score=82.37 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=64.9
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC-ccce---------e---------------e---------ee
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND-RVGG---------L---------------L---------QY 157 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~-~~gg---------~---------------~---------~~ 157 (276)
..+.|||+|++ |+++|..+++.|.+|+|+|+.. .+|. . + .+
T Consensus 29 yDVIVIGgG~A-----Gl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 29 FDVIIIGGGHA-----GTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CCEEEECChHH-----HHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 44556999999 9999999999999999999874 2221 0 0 00
Q ss_pred cC------CCC-----CCc-HHHHHHHHHHHHh-cCcEEEeeeeec-cccc---------hhhhhcccCEEEEcCCCCCC
Q psy12810 158 GI------PTM-----KLS-KEVVQRRVKLLAA-EGIEFKTNINVG-KDIA---------AKELYEEFDALLLCTGATWP 214 (276)
Q Consensus 158 ~~------~~~-----~~~-~~~~~~~~~~l~~-~gv~i~~~~~v~-~~~~---------~~~~~~~~D~vVlAtG~~~p 214 (276)
.. +.. ..+ ..+...+.+.+++ .|++++ ++.|. ...+ .+...+.+|.||+|||.+ +
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~-s 181 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTF-L 181 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTT-T
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCC-c
Confidence 00 000 011 2345556667777 599984 44443 1100 112357899999999998 7
Q ss_pred CCCCCCCc
Q psy12810 215 RDLPIPGR 222 (276)
Q Consensus 215 ~~~~i~g~ 222 (276)
+.+.++|.
T Consensus 182 ~~~~i~G~ 189 (651)
T 3ces_A 182 DGKIHIGL 189 (651)
T ss_dssp CCEEECC-
T ss_pred cCccccCc
Confidence 66666664
No 197
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.04 E-value=1.4e-06 Score=84.77 Aligned_cols=68 Identities=22% Similarity=0.194 Sum_probs=56.7
Q ss_pred hhHHHhhhhhhccccccceeeccccchhccccccc-----c---cc------c-----ccchhchHHHHHhhCCCeEEEe
Q psy12810 4 DHQLEKRLDNTLIQECEPVLSGKVPRIDLEYTINN-----E---CR------A-----FTATLSYHISIQHLVGHSVTVF 64 (276)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~------~-----~paGl~aA~~~aa~~G~~V~l~ 64 (276)
-+-|+..|.|...+ .|+.|++++||..+....+ . .+ . +|+||+||+. |+++||+|+||
T Consensus 231 ~~~~~~~~~r~~~~--~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~aGl~~A~~-l~~~g~~v~v~ 307 (852)
T 2xag_A 231 FEATLQQLEAPYNS--DTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQ-LQSFGMDVTLL 307 (852)
T ss_dssp HHHHHHHCCTTTTS--CHHHHHHHHHHHHHTTSSSCSSCBCSSCCCSSCCCEEEEECCSHHHHHHHHH-HHHTTCEEEEE
T ss_pred HHHHHHhCCCcccC--CcHHHHHHHHHHHHHHHHhcCcccccCCcccCCCCeEEEECCCHHHHHHHHH-HHHCCCcEEEE
Confidence 46788999999999 9999999999998765322 0 01 1 5899999999 89999999999
Q ss_pred ccCCCCCcee
Q psy12810 65 ERNDRVGGLL 74 (276)
Q Consensus 65 Ek~~~lGG~~ 74 (276)
|+.+++||.+
T Consensus 308 E~~~~~GG~~ 317 (852)
T 2xag_A 308 EARDRVGGRV 317 (852)
T ss_dssp CSSSSSCTTC
T ss_pred EecCcCCCce
Confidence 9999999964
No 198
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.02 E-value=3.2e-06 Score=80.68 Aligned_cols=48 Identities=10% Similarity=0.216 Sum_probs=35.6
Q ss_pred cHHHHHHHHHHHHhcCcEEEeeeeecc---c-----cch-hhh-hcccCEEEEcCCCC
Q psy12810 165 SKEVVQRRVKLLAAEGIEFKTNINVGK---D-----IAA-KEL-YEEFDALLLCTGAT 212 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv~i~~~~~v~~---~-----~~~-~~~-~~~~D~vVlAtG~~ 212 (276)
+..+...+.+.+.+.|+++++++.|+. + +.. +.. ++.+|.||+|+|.+
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcc
Confidence 466777888888899999999988751 1 111 222 67899999999987
No 199
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.94 E-value=1e-07 Score=84.94 Aligned_cols=68 Identities=7% Similarity=-0.064 Sum_probs=39.9
Q ss_pred cEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccc---------cchhhhhcccCEEEEcCC
Q psy12810 140 HSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD---------IAAKELYEEFDALLLCTG 210 (276)
Q Consensus 140 ~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~---------~~~~~~~~~~D~vVlAtG 210 (276)
.+|++++..+.+... + ..++.+.....+.+++.||++++++.+... ...+..++++|.|++++|
T Consensus 183 ~~v~i~~~~~~~~~~-~------~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g 255 (401)
T 3vrd_B 183 SKVIILDNSQTFSKQ-A------QFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPP 255 (401)
T ss_dssp CEEEEECSSSSCTTH-H------HHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCC
T ss_pred CEEEEEccccccccc-c------cccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecC
Confidence 567777776653100 0 112223333334456789999998765411 122334689999999999
Q ss_pred CCCCC
Q psy12810 211 ATWPR 215 (276)
Q Consensus 211 ~~~p~ 215 (276)
.+ |+
T Consensus 256 ~~-~~ 259 (401)
T 3vrd_B 256 QR-AG 259 (401)
T ss_dssp EE-EC
T ss_pred cC-Cc
Confidence 87 53
No 200
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.94 E-value=2e-06 Score=75.67 Aligned_cols=96 Identities=13% Similarity=0.078 Sum_probs=64.7
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccce------eee------ecCC------------------C
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGG------LLQ------YGIP------------------T 161 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg------~~~------~~~~------------------~ 161 (276)
+.|.|||+||+ |+.+|..|++.|++|+|+|+.+.++. .+. .+++ .
T Consensus 5 yDViIVGaGpa-----Gl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3oz2_A 5 YDVLVVGGGPG-----GSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred CCEEEECcCHH-----HHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCC
Confidence 34455999999 99999999999999999999776532 110 0000 0
Q ss_pred -----------------CCCc-HHHHHHHHHHHHhcCcEEEeeeeeccc-------------cchhhhhcccCEEEEcCC
Q psy12810 162 -----------------MKLS-KEVVQRRVKLLAAEGIEFKTNINVGKD-------------IAAKELYEEFDALLLCTG 210 (276)
Q Consensus 162 -----------------~~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~~-------------~~~~~~~~~~D~vVlAtG 210 (276)
+..+ ..+...+.+.+.+.|+++++++.+... .+++..++.+|.||-|.|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG 159 (397)
T 3oz2_A 80 EKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADG 159 (397)
T ss_dssp CSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCc
Confidence 0112 234445666777889999998876410 112334578999999999
Q ss_pred CC
Q psy12810 211 AT 212 (276)
Q Consensus 211 ~~ 212 (276)
.+
T Consensus 160 ~~ 161 (397)
T 3oz2_A 160 FE 161 (397)
T ss_dssp TT
T ss_pred cc
Confidence 75
No 201
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.92 E-value=4.1e-06 Score=77.65 Aligned_cols=96 Identities=16% Similarity=0.208 Sum_probs=65.4
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccc--------------------------eeeee---------
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVG--------------------------GLLQY--------- 157 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~g--------------------------g~~~~--------- 157 (276)
.+.|||+||+ |+.+|..|++.|++|+|+|+.+.++ |...+
T Consensus 109 DVVIVGgGpa-----GL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i 183 (549)
T 3nlc_A 109 RPIVIGFGPC-----GLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV 183 (549)
T ss_dssp CCEEECCSHH-----HHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCS
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEe
Confidence 3445999999 9999999999999999999986541 11000
Q ss_pred -----------------cCCCC------C-----CcHHHHHHHHHHHHhcCcEEEeeeeeccc---------cc-hhhhh
Q psy12810 158 -----------------GIPTM------K-----LSKEVVQRRVKLLAAEGIEFKTNINVGKD---------IA-AKELY 199 (276)
Q Consensus 158 -----------------~~~~~------~-----~~~~~~~~~~~~l~~~gv~i~~~~~v~~~---------~~-~~~~~ 199 (276)
+.+.. + ....+...+.+.+.+.|+++++++.|+.- +. .+..+
T Consensus 184 ~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~ 263 (549)
T 3nlc_A 184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE 263 (549)
T ss_dssp CCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCE
T ss_pred ccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCE
Confidence 00000 0 01345566677778889999999877510 11 12235
Q ss_pred cccCEEEEcCCCCCC
Q psy12810 200 EEFDALLLCTGATWP 214 (276)
Q Consensus 200 ~~~D~vVlAtG~~~p 214 (276)
+.+|.||+|+|.+ +
T Consensus 264 i~Ad~VVlA~G~~-s 277 (549)
T 3nlc_A 264 IKSRHVVLAVGHS-A 277 (549)
T ss_dssp EECSCEEECCCTT-C
T ss_pred EECCEEEECCCCC-h
Confidence 8899999999998 5
No 202
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.91 E-value=1e-05 Score=76.98 Aligned_cols=48 Identities=13% Similarity=0.253 Sum_probs=35.8
Q ss_pred cHHHHHHHHHHHHhcCcEEEeeeeeccc--------cc-hhhhhcccCEEEEcCCCC
Q psy12810 165 SKEVVQRRVKLLAAEGIEFKTNINVGKD--------IA-AKELYEEFDALLLCTGAT 212 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~~-~~~~~~~~D~vVlAtG~~ 212 (276)
+..+...+.+.+.+.|+++++++.|+.- +. .+..++.+|.||+|+|.+
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQ 472 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcc
Confidence 4667778888888999999999887511 11 122357899999999987
No 203
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.91 E-value=3.5e-06 Score=80.04 Aligned_cols=70 Identities=21% Similarity=0.199 Sum_probs=57.2
Q ss_pred cchhHHHhhhhhhccccccceeeccccchhccccccc-------cc-------cc-----ccchhchHHHHHhhCCCeEE
Q psy12810 2 IWDHQLEKRLDNTLIQECEPVLSGKVPRIDLEYTINN-------EC-------RA-----FTATLSYHISIQHLVGHSVT 62 (276)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-------~~-----~paGl~aA~~~aa~~G~~V~ 62 (276)
++.+.|+..+.|...+ .|+.|+++++|..+....+ .. .. +|+||+||+. ++++||+|+
T Consensus 58 ~~~~~~~~~~~r~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~gl~~a~~-l~~~g~~v~ 134 (662)
T 2z3y_A 58 LTFEATLQQLEAPYNS--DTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQ-LQSFGMDVT 134 (662)
T ss_dssp CCHHHHHHHSCTTGGG--CHHHHHHHHHHHHHTTSSSCSSCBCSSCCCSSCCCEEEEECCBHHHHHHHHH-HHHTTCEEE
T ss_pred cCHHHHHHhcCCCccC--ChHHHHHHHHHHHHHHHHhcCCccccCCCcccCCCeEEEECcCHHHHHHHHH-HHHCCCeEE
Confidence 3466788889999999 9999999999987764322 01 01 5899999999 899999999
Q ss_pred EeccCCCCCcee
Q psy12810 63 VFERNDRVGGLL 74 (276)
Q Consensus 63 l~Ek~~~lGG~~ 74 (276)
|||+++++||.+
T Consensus 135 ~~e~~~~~gg~~ 146 (662)
T 2z3y_A 135 LLEARDRVGGRV 146 (662)
T ss_dssp EECSSSSSBTTC
T ss_pred EEecCCCCCCcc
Confidence 999999999965
No 204
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.90 E-value=1.9e-05 Score=69.38 Aligned_cols=48 Identities=10% Similarity=-0.062 Sum_probs=34.9
Q ss_pred cHHHHHHHHHHHHhcCcEEEeeeeecc-c--------cchhhhhcccCEEEEcCCCC
Q psy12810 165 SKEVVQRRVKLLAAEGIEFKTNINVGK-D--------IAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv~i~~~~~v~~-~--------~~~~~~~~~~D~vVlAtG~~ 212 (276)
+..+...+.+.+++.|+++++++.|+. . +.....++.+|.||+|+|.+
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKGIIKTGIVVNATNAW 204 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTEEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCcEEECCEEEECcchh
Confidence 456777788888889999999987641 1 11112257899999999986
No 205
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.90 E-value=4.5e-05 Score=70.12 Aligned_cols=31 Identities=29% Similarity=0.295 Sum_probs=28.7
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~ 74 (276)
++|||+||+. |+++|++|+|+||.+.+||..
T Consensus 50 G~AGl~AA~~-aa~~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 50 GIAGVAASIE-AARAGADVLVLERTSGWGGAT 80 (510)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCTTG
T ss_pred CHHHHHHHHH-HHHCCCcEEEEeCCCCCCCcc
Confidence 6999999999 899999999999999888765
No 206
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.88 E-value=5.5e-06 Score=68.08 Aligned_cols=37 Identities=16% Similarity=0.334 Sum_probs=33.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
|.|||+||+ |+++|..|++.|++|+|||+.+.+||.+
T Consensus 5 V~IIGaGpa-----GL~aA~~La~~G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 5 IAIIGTGIA-----GLSAAQALTAAGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 445999999 9999999999999999999999988744
No 207
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.88 E-value=5.6e-06 Score=77.26 Aligned_cols=37 Identities=16% Similarity=0.276 Sum_probs=32.2
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccce
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGG 153 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg 153 (276)
..|.|||+|++ |+.+|..|++.|.+|+|+|+.+.+||
T Consensus 127 ~DVvVVGaG~a-----Gl~aA~~la~~G~~V~vlEk~~~~gg 163 (571)
T 1y0p_A 127 VDVVVVGSGGA-----GFSAAISATDSGAKVILIEKEPVIGG 163 (571)
T ss_dssp CSEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCEEEECCCHH-----HHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 34445999999 99999999999999999999887654
No 208
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.86 E-value=3.7e-05 Score=67.99 Aligned_cols=48 Identities=13% Similarity=0.093 Sum_probs=34.9
Q ss_pred cHHHHHHHHHHHHhcCcEEEeeeeecc---c------cchhhhhcccCEEEEcCCCC
Q psy12810 165 SKEVVQRRVKLLAAEGIEFKTNINVGK---D------IAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv~i~~~~~v~~---~------~~~~~~~~~~D~vVlAtG~~ 212 (276)
+..+...+.+.+++.|+++++++.|+. + +..+..++.+|.||+|+|.+
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~a~~vV~a~G~~ 229 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRGTIHAGKVALAGAGH 229 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTCCEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCceEECCEEEECCchh
Confidence 456777788888889999999887651 1 11111257899999999986
No 209
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.82 E-value=8.8e-06 Score=71.74 Aligned_cols=95 Identities=16% Similarity=0.209 Sum_probs=64.9
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccce----e--ee--------ec--------------------
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGG----L--LQ--------YG-------------------- 158 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg----~--~~--------~~-------------------- 158 (276)
.+.|||+|++ |+++|..|++.|.+|+|+|+.+.+++ . .. .+
T Consensus 13 dVvIVGaG~a-----Gl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 87 (379)
T 3alj_A 13 RAEVAGGGFA-----GLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH 87 (379)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET
T ss_pred eEEEECCCHH-----HHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC
Confidence 3445999999 99999999999999999999876531 0 00 00
Q ss_pred -----------CCCCCCc-HHHHHHHHHHHHhcCcEEEeeeeecc-c----cc-hhhhhcccCEEEEcCCCC
Q psy12810 159 -----------IPTMKLS-KEVVQRRVKLLAAEGIEFKTNINVGK-D----IA-AKELYEEFDALLLCTGAT 212 (276)
Q Consensus 159 -----------~~~~~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~-~----~~-~~~~~~~~D~vVlAtG~~ 212 (276)
.+.+..+ .++...+.+.+.+.|+++++++.++. . +. .+..++.+|.||.|+|..
T Consensus 88 g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 88 NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVG 159 (379)
T ss_dssp TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTT
T ss_pred CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCcc
Confidence 0000111 44566677778888999999987642 1 11 112357899999999987
No 210
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.77 E-value=2.7e-05 Score=68.22 Aligned_cols=48 Identities=10% Similarity=-0.029 Sum_probs=35.8
Q ss_pred cHHHHHHHHHHHHhcCcEEEeeeeeccc--------cchhhhhcccCEEEEcCCCC
Q psy12810 165 SKEVVQRRVKLLAAEGIEFKTNINVGKD--------IAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~~~~~~~~~~D~vVlAtG~~ 212 (276)
+..+...+.+.+++.|+++++++.|+.- +.....++.+|.||+|+|.+
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g~i~a~~VV~A~G~~ 208 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAGSYRAAVLVNAAGAW 208 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSEEEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCCEEEcCEEEECCChh
Confidence 4567778888888999999999887521 11112267899999999986
No 211
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.75 E-value=1.2e-05 Score=70.67 Aligned_cols=35 Identities=11% Similarity=0.038 Sum_probs=30.2
Q ss_pred cchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 111 DIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 111 ~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
+..+.|||+|++ |+.+|..|++.|.+|+|+|+.+.
T Consensus 17 ~~dvvIIGgG~~-----Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGII-----GSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSST
T ss_pred CCCEEEECcCHH-----HHHHHHHHHhCCCcEEEEeCCCC
Confidence 344556999999 99999999999999999998753
No 212
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.75 E-value=9.3e-06 Score=73.40 Aligned_cols=95 Identities=17% Similarity=0.278 Sum_probs=64.8
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee-----------ee------------------------
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL-----------QY------------------------ 157 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~-----------~~------------------------ 157 (276)
.+.|||+|++ |+.+|..|++.|.+|+|+|+.+.+|+.. +.
T Consensus 28 dVvIIGgG~a-----Gl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (447)
T 2i0z_A 28 DVIVIGGGPS-----GLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIF 102 (447)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHS
T ss_pred CEEEECCcHH-----HHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhc
Confidence 3445999999 9999999999999999999988654210 00
Q ss_pred ------------cCCC--------CC---CcHHHHHHHHHHHHhcCcEEEeeeeecc-c--------cc-hhhhhcccCE
Q psy12810 158 ------------GIPT--------MK---LSKEVVQRRVKLLAAEGIEFKTNINVGK-D--------IA-AKELYEEFDA 204 (276)
Q Consensus 158 ------------~~~~--------~~---~~~~~~~~~~~~l~~~gv~i~~~~~v~~-~--------~~-~~~~~~~~D~ 204 (276)
+++. ++ ....+...+.+.+++.|+++++++.|.. . +. .+...+.+|.
T Consensus 103 ~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~ 182 (447)
T 2i0z_A 103 NNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNH 182 (447)
T ss_dssp CHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSC
T ss_pred CHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCE
Confidence 0000 00 1245556677777888999999987641 1 11 1112478999
Q ss_pred EEEcCCCC
Q psy12810 205 LLLCTGAT 212 (276)
Q Consensus 205 vVlAtG~~ 212 (276)
||+|+|..
T Consensus 183 VVlAtGg~ 190 (447)
T 2i0z_A 183 VVIAVGGK 190 (447)
T ss_dssp EEECCCCS
T ss_pred EEECCCCC
Confidence 99999987
No 213
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.75 E-value=7.2e-05 Score=65.72 Aligned_cols=48 Identities=25% Similarity=0.273 Sum_probs=35.2
Q ss_pred cHHHHHHHHHHHHhcCcEEEeeeeecc-c-------cchhhhhcccCEEEEcCCCC
Q psy12810 165 SKEVVQRRVKLLAAEGIEFKTNINVGK-D-------IAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv~i~~~~~v~~-~-------~~~~~~~~~~D~vVlAtG~~ 212 (276)
+..+...+.+.+++.|+++++++.|.. . +..+..++.+|.||+|+|.+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~a~~vV~A~G~~ 204 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANGSYTADKLIVSMGAW 204 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCCEEEeCEEEEecCcc
Confidence 356777788888899999999987651 0 11122257899999999986
No 214
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.74 E-value=7.7e-06 Score=72.95 Aligned_cols=95 Identities=18% Similarity=0.226 Sum_probs=63.2
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc----cceee-e--------ec---------------------
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR----VGGLL-Q--------YG--------------------- 158 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~----~gg~~-~--------~~--------------------- 158 (276)
.|.|||+|++ |+.+|..|++.|.+|+|+|+.+. .|..+ + .+
T Consensus 7 dVvIIGgG~a-----Gl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 81 (421)
T 3nix_A 7 DVLVIGAGPA-----GTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRG 81 (421)
T ss_dssp EEEEECCSHH-----HHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred cEEEECCCHH-----HHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeC
Confidence 3445999999 99999999999999999999762 12111 0 00
Q ss_pred -------CC---------CCCC-cHHHHHHHHHHHHhcCcEEEeeeeecc---c-------c---chhhhhcccCEEEEc
Q psy12810 159 -------IP---------TMKL-SKEVVQRRVKLLAAEGIEFKTNINVGK---D-------I---AAKELYEEFDALLLC 208 (276)
Q Consensus 159 -------~~---------~~~~-~~~~~~~~~~~l~~~gv~i~~~~~v~~---~-------~---~~~~~~~~~D~vVlA 208 (276)
.. .+.. ...+...+.+.+.+.|+++++++.|+. + + +++..++.+|.||.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A 161 (421)
T 3nix_A 82 KEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDA 161 (421)
T ss_dssp TEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEEC
T ss_pred CeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEEC
Confidence 00 0011 234556667777778999999987641 0 1 111125889999999
Q ss_pred CCCC
Q psy12810 209 TGAT 212 (276)
Q Consensus 209 tG~~ 212 (276)
+|.+
T Consensus 162 ~G~~ 165 (421)
T 3nix_A 162 SGYG 165 (421)
T ss_dssp CGGG
T ss_pred CCCc
Confidence 9975
No 215
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.67 E-value=1.1e-05 Score=75.08 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=31.5
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccce
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGG 153 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg 153 (276)
.|.|||+|++ |+.+|..|++.|.+|+|||+.+.++|
T Consensus 123 DVvVVG~G~a-----Gl~aA~~la~~G~~V~vlEk~~~~gg 158 (566)
T 1qo8_A 123 QVLVVGAGSA-----GFNASLAAKKAGANVILVDKAPFSGG 158 (566)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CEEEECCCHH-----HHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 4445999999 99999999999999999999886653
No 216
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.67 E-value=6.1e-05 Score=66.58 Aligned_cols=47 Identities=13% Similarity=0.184 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHhcCcEEEeeeeecc--------ccchhhhhcccCEEEEcCCCC
Q psy12810 166 KEVVQRRVKLLAAEGIEFKTNINVGK--------DIAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 166 ~~~~~~~~~~l~~~gv~i~~~~~v~~--------~~~~~~~~~~~D~vVlAtG~~ 212 (276)
..+...+.+.+.+.|+++++++.|+. .+.....++.+|.||+|+|.+
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRGTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSCEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCCEEEcCEEEEcCCcC
Confidence 45666777778888999999987752 011122357899999999986
No 217
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.65 E-value=2.1e-05 Score=72.86 Aligned_cols=33 Identities=27% Similarity=0.280 Sum_probs=30.4
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY 76 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~ 76 (276)
+|+|+++|.. |++.|++|+||||++.+||+|..
T Consensus 25 G~aGl~aA~~-L~~~G~~v~iiE~~~~~GG~w~~ 57 (542)
T 1w4x_A 25 GFSGLYALYR-LRELGRSVHVIETAGDVGGVWYW 57 (542)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCTHHHH
T ss_pred cHHHHHHHHH-HHhCCCCEEEEeCCCCCCCcccc
Confidence 6999999999 89999999999999999998853
No 218
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.61 E-value=4.2e-05 Score=66.90 Aligned_cols=48 Identities=17% Similarity=0.199 Sum_probs=34.8
Q ss_pred cHHHHHHHHHHHHhcCcEEEeeeeecc-c-------cchhhhhcccCEEEEcCCCC
Q psy12810 165 SKEVVQRRVKLLAAEGIEFKTNINVGK-D-------IAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv~i~~~~~v~~-~-------~~~~~~~~~~D~vVlAtG~~ 212 (276)
+..+...+.+.+.+.|+++++++.|.. . +.....++.+|.||+|+|.+
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGEYQAKKAIVCAGTW 203 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCeEEcCEEEEcCCcc
Confidence 346777788888889999999987641 1 11122247899999999987
No 219
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.56 E-value=1.8e-05 Score=69.78 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=64.3
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeee------------ecC------------------CC-
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQ------------YGI------------------PT- 161 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~------------~~~------------------~~- 161 (276)
.|.|||+|++ |+.+|..|++.|.+|+|+|+.+.+|+... .++ +.
T Consensus 6 dVvIvG~G~a-----Gl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 80 (397)
T 3cgv_A 6 DVLVVGGGPG-----GSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSE 80 (397)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTC
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCC
Confidence 3445999999 99999999999999999999885543110 001 00
Q ss_pred ---C-------------CCc-HHHHHHHHHHHHhcCcEEEeeeeecc---c------cc----hhhhhcccCEEEEcCCC
Q psy12810 162 ---M-------------KLS-KEVVQRRVKLLAAEGIEFKTNINVGK---D------IA----AKELYEEFDALLLCTGA 211 (276)
Q Consensus 162 ---~-------------~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~---~------~~----~~~~~~~~D~vVlAtG~ 211 (276)
. ..+ ..+...+.+.+.+.|+++++++.|+. + +. ++..++.+|.||.|+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 81 KRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp SSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred CEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCc
Confidence 0 011 23445566777778999999987641 0 11 22346789999999998
Q ss_pred C
Q psy12810 212 T 212 (276)
Q Consensus 212 ~ 212 (276)
+
T Consensus 161 ~ 161 (397)
T 3cgv_A 161 E 161 (397)
T ss_dssp T
T ss_pred c
Confidence 6
No 220
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.55 E-value=1.9e-05 Score=68.49 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=31.5
Q ss_pred hhccCCCCCCCCCCCCcchhhhh---CCcEEEEEcCCCcccee
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNI---VGHSVTVFERNDRVGGL 154 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~---~G~~Vtvie~~~~~gg~ 154 (276)
.|||+|++ |+.+|..|++ .|++|+|||+.+.+||.
T Consensus 5 ~IIGaG~a-----Gl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~ 42 (342)
T 3qj4_A 5 LIVGAGMT-----GSLCAALLRRQTSGPLYLAVWDKADDSGGR 42 (342)
T ss_dssp EEECCSHH-----HHHHHHHHHSCC-CCEEEEEECSSSSSCGG
T ss_pred EEECCcHH-----HHHHHHHHHhhccCCceEEEEECCCCCccc
Confidence 34999999 9999999999 99999999999877763
No 221
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.50 E-value=3.9e-05 Score=70.55 Aligned_cols=95 Identities=17% Similarity=0.240 Sum_probs=63.8
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc----cceee-------------------------------ee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR----VGGLL-------------------------------QY 157 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~----~gg~~-------------------------------~~ 157 (276)
.|.|||+|++ |+.+|..|++.|++|+|||+.+. .|..+ .+
T Consensus 9 dVvIVGgG~a-----Gl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~ 83 (512)
T 3e1t_A 9 DLIVIGGGPG-----GSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRW 83 (512)
T ss_dssp EEEEECCSHH-----HHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEEC
T ss_pred CEEEECcCHH-----HHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEe
Confidence 4445999999 99999999999999999999862 11100 00
Q ss_pred cCC------------------CCCCc-HHHHHHHHHHHHhcCcEEEeeeeecc-----------cc---chhhhhcccCE
Q psy12810 158 GIP------------------TMKLS-KEVVQRRVKLLAAEGIEFKTNINVGK-----------DI---AAKELYEEFDA 204 (276)
Q Consensus 158 ~~~------------------~~~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~-----------~~---~~~~~~~~~D~ 204 (276)
+.. .+..+ ..+...+.+.+.+.|+++++++.|+. .. +++..++.+|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~ 163 (512)
T 3e1t_A 84 GKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARF 163 (512)
T ss_dssp SSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEE
T ss_pred cCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCE
Confidence 000 00112 34556667777788999999977641 01 11123688999
Q ss_pred EEEcCCCC
Q psy12810 205 LLLCTGAT 212 (276)
Q Consensus 205 vVlAtG~~ 212 (276)
||.|+|.+
T Consensus 164 VI~AdG~~ 171 (512)
T 3e1t_A 164 IVDASGNR 171 (512)
T ss_dssp EEECCCTT
T ss_pred EEECCCcc
Confidence 99999986
No 222
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.48 E-value=6.9e-05 Score=69.19 Aligned_cols=34 Identities=18% Similarity=0.138 Sum_probs=29.9
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
.|.|||+||+ |+.+|..|++.|.+|+|||+.+..
T Consensus 7 dVlIVGaG~a-----Gl~~A~~La~~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 7 DVLVVGAGLG-----GLSTAMFLARQGVRVLVVERRPGL 40 (535)
T ss_dssp EEEEECCSHH-----HHHHHHHHHTTTCCEEEECSSSSC
T ss_pred cEEEECcCHH-----HHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3445999999 999999999999999999998643
No 223
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.47 E-value=3.7e-05 Score=69.52 Aligned_cols=95 Identities=15% Similarity=0.162 Sum_probs=63.9
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccc--e-----ee------eecC-------------------C
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVG--G-----LL------QYGI-------------------P 160 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~g--g-----~~------~~~~-------------------~ 160 (276)
.|.|||+||+ |+.+|..|++.|.+|+|+|+.+... . .+ ..++ +
T Consensus 8 dVvIVGaG~a-----Gl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 82 (453)
T 3atr_A 8 DVLIIGGGFA-----GSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSP 82 (453)
T ss_dssp SEEEECCSHH-----HHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECT
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECC
Confidence 3445999999 9999999999999999999877531 0 00 0000 0
Q ss_pred C-----------CCCc-HHHHHHHHHHHHhcCcEEEeeeeecc---c--------c----chhhhhcccCEEEEcCCCC
Q psy12810 161 T-----------MKLS-KEVVQRRVKLLAAEGIEFKTNINVGK---D--------I----AAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 161 ~-----------~~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~---~--------~----~~~~~~~~~D~vVlAtG~~ 212 (276)
. +..+ ..+...+.+.+.+.|+++++++.|+. + . +++..++.+|.||.|+|..
T Consensus 83 ~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~ 161 (453)
T 3atr_A 83 DMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYS 161 (453)
T ss_dssp TSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGG
T ss_pred CCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCc
Confidence 0 0112 34556667777788999999987641 0 1 1112367899999999986
No 224
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.45 E-value=5.1e-05 Score=67.21 Aligned_cols=95 Identities=14% Similarity=0.151 Sum_probs=63.3
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccc-------------------eee----------------ee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVG-------------------GLL----------------QY 157 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~g-------------------g~~----------------~~ 157 (276)
.+.|||+|++ |+.+|..|++.|.+|+|+|+.+... |.+ ..
T Consensus 8 dVvIVGaG~a-----Gl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 82 (399)
T 2x3n_A 8 DVLINGCGIG-----GAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYH 82 (399)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEE
T ss_pred CEEEECcCHH-----HHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeC
Confidence 3445999999 9999999999999999999876441 000 00
Q ss_pred -c-----CCC---------C-CCcHHHHHHHHHHHHhc-CcEEEeeeeecc----------ccc-hhhhhcccCEEEEcC
Q psy12810 158 -G-----IPT---------M-KLSKEVVQRRVKLLAAE-GIEFKTNINVGK----------DIA-AKELYEEFDALLLCT 209 (276)
Q Consensus 158 -~-----~~~---------~-~~~~~~~~~~~~~l~~~-gv~i~~~~~v~~----------~~~-~~~~~~~~D~vVlAt 209 (276)
+ ++. + .....+...+.+.+.+. |++++++++++. .+. .+..++.+|.||.|+
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~Ad 162 (399)
T 2x3n_A 83 DGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGAD 162 (399)
T ss_dssp TTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECC
T ss_pred CCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECC
Confidence 0 000 0 11234566677777777 999999887641 111 112257899999999
Q ss_pred CCC
Q psy12810 210 GAT 212 (276)
Q Consensus 210 G~~ 212 (276)
|.+
T Consensus 163 G~~ 165 (399)
T 2x3n_A 163 GIA 165 (399)
T ss_dssp CTT
T ss_pred CCC
Confidence 986
No 225
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.45 E-value=0.00042 Score=60.39 Aligned_cols=45 Identities=20% Similarity=0.115 Sum_probs=33.4
Q ss_pred CcHHHHHHHHHHHHhcCcEEEeeeeeccccchhhhhcccCEEEEcCCCC
Q psy12810 164 LSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 164 ~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~~~~~~~~~D~vVlAtG~~ 212 (276)
.+..+...+.+.+.+.|++++. +.|+.-... .+ .+|.||+|+|.+
T Consensus 140 ~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~--~~-~a~~VV~A~G~~ 184 (363)
T 1c0p_A 140 HAPKYCQYLARELQKLGATFER-RTVTSLEQA--FD-GADLVVNATGLG 184 (363)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT--CS-SCSEEEECCGGG
T ss_pred cHHHHHHHHHHHHHHCCCEEEE-EEcccHhhc--Cc-CCCEEEECCCcc
Confidence 3566777888888899999998 776521111 13 899999999987
No 226
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.43 E-value=6.2e-05 Score=66.36 Aligned_cols=91 Identities=14% Similarity=0.172 Sum_probs=63.8
Q ss_pred hhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCCcc---cee----------------e-ee---------------
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERNDRV---GGL----------------L-QY--------------- 157 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~~~---gg~----------------~-~~--------------- 157 (276)
.|||+||+ |+.+|..|++. |.+|+|+|+.+.+ |.. + ..
T Consensus 4 ~IVGaG~a-----Gl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (381)
T 3c4a_A 4 LVIGAGPA-----GLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLV 78 (381)
T ss_dssp EEECCSHH-----HHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEE
T ss_pred EEECCCHH-----HHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEE
Confidence 34999999 99999999998 9999999998755 111 1 00
Q ss_pred ----------cCCCCCC-cHHHHHHHHHHHHhcCcEEEeeeeeccccchhhhhcccCEEEEcCCCC
Q psy12810 158 ----------GIPTMKL-SKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 158 ----------~~~~~~~-~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~~~~~~~~~D~vVlAtG~~ 212 (276)
+.+.... ..++...+.+.+.+.|++++++++|+.-... .++.+|.||.|.|.+
T Consensus 79 ~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~~~~ad~vV~AdG~~ 142 (381)
T 3c4a_A 79 HHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL--PLADYDLVVLANGVN 142 (381)
T ss_dssp ESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC--CGGGCSEEEECCGGG
T ss_pred eCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc--ccccCCEEEECCCCC
Confidence 0000011 2456666777788889999999988632111 246899999999987
No 227
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.43 E-value=2.8e-05 Score=72.87 Aligned_cols=104 Identities=15% Similarity=0.147 Sum_probs=65.0
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC-ccce------------------------ee---------ee
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND-RVGG------------------------LL---------QY 157 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~-~~gg------------------------~~---------~~ 157 (276)
..+.|||+|++ |+++|..+++.|.+|+|+|+.. .+|. .+ .+
T Consensus 28 yDVIVIGgG~A-----Gl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 28 FDVVVIGGGHA-----GIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp CSEEEECCSHH-----HHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CCEEEECCCHH-----HHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 34455999999 9999999999999999999874 2221 00 00
Q ss_pred cC------CCC-----CCc-HHHHHHHHHHHHh-cCcEEEeeeeecc-cc---------chhhhhcccCEEEEcCCCCCC
Q psy12810 158 GI------PTM-----KLS-KEVVQRRVKLLAA-EGIEFKTNINVGK-DI---------AAKELYEEFDALLLCTGATWP 214 (276)
Q Consensus 158 ~~------~~~-----~~~-~~~~~~~~~~l~~-~gv~i~~~~~v~~-~~---------~~~~~~~~~D~vVlAtG~~~p 214 (276)
.. +.. ..+ ..+...+.+.+++ .|++++ ++.|+. .. ..+...+.+|.||+|||.. +
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~-s 180 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF-L 180 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC-B
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC-c
Confidence 00 000 011 2345556667777 599984 444431 10 1112357899999999998 6
Q ss_pred CCCCCCCc
Q psy12810 215 RDLPIPGR 222 (276)
Q Consensus 215 ~~~~i~g~ 222 (276)
+.+.++|.
T Consensus 181 ~~~~~~G~ 188 (637)
T 2zxi_A 181 NGVIYIGD 188 (637)
T ss_dssp TCEEEETT
T ss_pred cCceeccc
Confidence 66555543
No 228
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.43 E-value=5.9e-05 Score=64.91 Aligned_cols=36 Identities=17% Similarity=0.317 Sum_probs=31.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcccee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGL 154 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~ 154 (276)
+.|||+|++ |+.+|..|++.|.+|+|+|+.+.+||.
T Consensus 5 V~IIGaG~~-----Gl~~A~~L~~~G~~V~vlE~~~~~gg~ 40 (336)
T 1yvv_A 5 IAIIGTGIA-----GLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred EEEECCcHH-----HHHHHHHHHHCCCcEEEEECCCCCccc
Confidence 334999999 999999999999999999999877653
No 229
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.42 E-value=0.00032 Score=62.84 Aligned_cols=51 Identities=16% Similarity=0.207 Sum_probs=36.5
Q ss_pred cHHHHHHHHHHHHhcCcEEEeee---eecc-c--------cch-hhhhcccCEEEEcCCCCCCC
Q psy12810 165 SKEVVQRRVKLLAAEGIEFKTNI---NVGK-D--------IAA-KELYEEFDALLLCTGATWPR 215 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv~i~~~~---~v~~-~--------~~~-~~~~~~~D~vVlAtG~~~p~ 215 (276)
+..+...+.+.+++.|++|++++ .|+. . +.. +..++.+|.||+|+|.+++.
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~ 223 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQ 223 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhh
Confidence 45677788888889999999998 6641 0 111 22268899999999987333
No 230
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.42 E-value=0.00015 Score=64.61 Aligned_cols=28 Identities=32% Similarity=0.421 Sum_probs=26.1
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lG 71 (276)
+|+|+.||+. |+++|++|+|+||++.+|
T Consensus 13 G~aGl~aA~~-la~~G~~V~vlEk~~~~g 40 (401)
T 2gqf_A 13 GAAGLFCAAQ-LAKLGKSVTVFDNGKKIG 40 (401)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSC
T ss_pred cHHHHHHHHH-HHhCCCCEEEEeCCCCCc
Confidence 6999999999 899999999999998774
No 231
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.40 E-value=5.8e-05 Score=66.68 Aligned_cols=94 Identities=16% Similarity=0.136 Sum_probs=62.2
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc--------ceeee--------ecCC-----------------
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV--------GGLLQ--------YGIP----------------- 160 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~--------gg~~~--------~~~~----------------- 160 (276)
|.|||+||+ |+.+|..|++.|.+|+|+|+.+.. |.+++ .++.
T Consensus 5 V~IvGaG~a-----Gl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 79 (394)
T 1k0i_A 5 VAIIGAGPS-----GLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAF 79 (394)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEE
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEE
Confidence 445999999 999999999999999999987741 11110 0000
Q ss_pred -----------------CCCCc-HHHHHHHHHHHHhcCcEEEeeeeecc---c------cc--hhhh--hcccCEEEEcC
Q psy12810 161 -----------------TMKLS-KEVVQRRVKLLAAEGIEFKTNINVGK---D------IA--AKEL--YEEFDALLLCT 209 (276)
Q Consensus 161 -----------------~~~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~---~------~~--~~~~--~~~~D~vVlAt 209 (276)
.+..+ .++...+.+.+.+.|++++++++++. + +. .+.. ++.+|.||.|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~Ad 159 (394)
T 1k0i_A 80 AGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCD 159 (394)
T ss_dssp TTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECC
T ss_pred CCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECC
Confidence 00011 34555566667778999999887641 1 00 1112 57899999999
Q ss_pred CCC
Q psy12810 210 GAT 212 (276)
Q Consensus 210 G~~ 212 (276)
|.+
T Consensus 160 G~~ 162 (394)
T 1k0i_A 160 GFH 162 (394)
T ss_dssp CTT
T ss_pred CCC
Confidence 987
No 232
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.38 E-value=6.1e-05 Score=69.10 Aligned_cols=104 Identities=17% Similarity=0.168 Sum_probs=66.3
Q ss_pred eccccCccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccce------eee--------ecC----------
Q psy12810 104 TNINVGKDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGG------LLQ--------YGI---------- 159 (276)
Q Consensus 104 ~~~~v~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg------~~~--------~~~---------- 159 (276)
+|++..+++.|.|||+||+ |+.+|..|++.|.+|+|||+.+..+. +.. .++
T Consensus 4 ~~~~~~~~~dVlIVGaGpa-----Gl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~ 78 (500)
T 2qa1_A 4 HHHHHRSDAAVIVVGAGPA-----GMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETS 78 (500)
T ss_dssp ----CCSBCSEEEECCSHH-----HHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBC
T ss_pred ccCCccCCCCEEEECcCHH-----HHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccc
Confidence 3444455566667999999 99999999999999999998764421 000 000
Q ss_pred ---------------C-CC----CCc-HHHHHHHHHHHHhcCcEEEeeeeecc---c-----c--chh--hhhcccCEEE
Q psy12810 160 ---------------P-TM----KLS-KEVVQRRVKLLAAEGIEFKTNINVGK---D-----I--AAK--ELYEEFDALL 206 (276)
Q Consensus 160 ---------------~-~~----~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~---~-----~--~~~--~~~~~~D~vV 206 (276)
+ .+ ..+ ..+...+.+.+.+.|++++++++++. + + .+. ..++.+|.||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vV 158 (500)
T 2qa1_A 79 TQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLV 158 (500)
T ss_dssp CEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEE
T ss_pred ccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEE
Confidence 0 00 011 23445566677778999999987651 0 1 111 1257899999
Q ss_pred EcCCCC
Q psy12810 207 LCTGAT 212 (276)
Q Consensus 207 lAtG~~ 212 (276)
.|.|.+
T Consensus 159 gADG~~ 164 (500)
T 2qa1_A 159 GCDGGR 164 (500)
T ss_dssp ECCCTT
T ss_pred ECCCcc
Confidence 999987
No 233
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.36 E-value=9.5e-05 Score=64.26 Aligned_cols=72 Identities=11% Similarity=0.147 Sum_probs=49.5
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCCccce-eeee--------------------cCCC-----C--
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERNDRVGG-LLQY--------------------GIPT-----M-- 162 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~~~gg-~~~~--------------------~~~~-----~-- 162 (276)
.+.|||+|++ |+.+|..|++. |.+|+|+|+.+.+|| .|.. +++. +
T Consensus 81 DVvIVGgG~A-----GL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~ 155 (344)
T 3jsk_A 81 DIVIVGAGSC-----GLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVV 155 (344)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEE
T ss_pred CEEEECccHH-----HHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEE
Confidence 3445999999 99999999997 999999999887652 2210 1110 0
Q ss_pred -CCcHHHHHHHHHHHHh-cCcEEEeeeee
Q psy12810 163 -KLSKEVVQRRVKLLAA-EGIEFKTNINV 189 (276)
Q Consensus 163 -~~~~~~~~~~~~~l~~-~gv~i~~~~~v 189 (276)
....++...+.+.+.+ .|++++.++.+
T Consensus 156 ~~~~~d~~~~L~~~a~~~~gV~i~~~~~V 184 (344)
T 3jsk_A 156 VKHAALFTSTVLSKVLQRPNVKLFNATTV 184 (344)
T ss_dssp ESCHHHHHHHHHHHHHTCTTEEEEETEEE
T ss_pred EecHHHHHHHHHHHHHhCCCCEEEeCCEE
Confidence 1123455666666777 59999988765
No 234
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.36 E-value=5.1e-05 Score=65.52 Aligned_cols=73 Identities=11% Similarity=0.097 Sum_probs=50.1
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCCccce-eee--------------------ecCCCC-------
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERNDRVGG-LLQ--------------------YGIPTM------- 162 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~~~gg-~~~--------------------~~~~~~------- 162 (276)
.+.|||+||+ |+.+|..|++. |++|+|+|+.+.+|| .|. ++++..
T Consensus 67 dv~IiG~G~a-----Gl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~ 141 (326)
T 2gjc_A 67 DVIIVGAGSS-----GLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVV 141 (326)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEE
T ss_pred CEEEECccHH-----HHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEE
Confidence 3445999999 99999999998 999999999887753 221 011100
Q ss_pred -CCcHHHHHHHHHHHHhc-CcEEEeeeeec
Q psy12810 163 -KLSKEVVQRRVKLLAAE-GIEFKTNINVG 190 (276)
Q Consensus 163 -~~~~~~~~~~~~~l~~~-gv~i~~~~~v~ 190 (276)
....++...+.+.+.+. |++++.++.+.
T Consensus 142 ~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~ 171 (326)
T 2gjc_A 142 VKHAALFISTVLSKVLQLPNVKLFNATCVE 171 (326)
T ss_dssp ESCHHHHHHHHHHHHHTSTTEEEETTEEEE
T ss_pred EcchHHHHHHHHHHHHHhcCcEEEecceee
Confidence 01234555666667664 99998877653
No 235
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.36 E-value=6.3e-05 Score=70.14 Aligned_cols=95 Identities=17% Similarity=0.136 Sum_probs=64.2
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccc-------------------eeee-------------ec-C
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVG-------------------GLLQ-------------YG-I 159 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~g-------------------g~~~-------------~~-~ 159 (276)
.|.|||+||+ |+.+|..|++.|.+|+|||+.+... |++. ++ .
T Consensus 51 DVvIVGaG~a-----GL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 125 (570)
T 3fmw_A 51 DVVVVGGGPV-----GLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGI 125 (570)
T ss_dssp CEEEECCSHH-----HHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTB
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCc
Confidence 4455999999 9999999999999999999876432 1110 00 0
Q ss_pred --------------CC-CCCc-HHHHHHHHHHHHhcCcEEEeeeeecc---c-----cc---hhh-hhcccCEEEEcCCC
Q psy12810 160 --------------PT-MKLS-KEVVQRRVKLLAAEGIEFKTNINVGK---D-----IA---AKE-LYEEFDALLLCTGA 211 (276)
Q Consensus 160 --------------~~-~~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~---~-----~~---~~~-~~~~~D~vVlAtG~ 211 (276)
+. +..+ ..+...+.+.+.+.|++++++++|+. + +. .+. .++.+|.||.|.|.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 126 FTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGG 205 (570)
T ss_dssp CTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCS
T ss_pred ccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCC
Confidence 00 1122 34555566777778999999987651 1 11 122 46889999999998
Q ss_pred C
Q psy12810 212 T 212 (276)
Q Consensus 212 ~ 212 (276)
+
T Consensus 206 ~ 206 (570)
T 3fmw_A 206 R 206 (570)
T ss_dssp S
T ss_pred C
Confidence 6
No 236
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.30 E-value=9.3e-05 Score=65.73 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=31.5
Q ss_pred ccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 110 KDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 110 ~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
+.+.|.|||+|++ |+.+|..|++.|.+|+|+|+.+.+
T Consensus 22 ~~~dV~IVGaG~a-----Gl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 22 GHMKAIVIGAGIG-----GLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp -CCEEEEECCSHH-----HHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCCEEEEECCCHH-----HHHHHHHHHhCCCCEEEEeCCCCC
Confidence 3445556999999 999999999999999999998754
No 237
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.28 E-value=0.0001 Score=67.06 Aligned_cols=28 Identities=11% Similarity=0.176 Sum_probs=26.8
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCC
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERN 148 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~ 148 (276)
|||+|++ |+.+|..|++.|.+|+|+|+.
T Consensus 4 VIG~G~A-----Gl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 4 IIGSGIA-----GLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp EECCSHH-----HHHHHHHHHHTTCCEEEECSS
T ss_pred EECCCHH-----HHHHHHHHHHCCCCEEEEeCC
Confidence 4999999 999999999999999999998
No 238
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.25 E-value=8.3e-05 Score=67.84 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=23.3
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+++||+||+. |+++|++|+|+|+++++||.+.
T Consensus 10 G~~GL~aA~~-La~~G~~V~VlEa~~~~GG~~~ 41 (501)
T 4dgk_A 10 GFGGLALAIR-LQAAGIPVLLLEQRDKPGGRAY 41 (501)
T ss_dssp HHHHHHHHHH-HHHTTCCEEEECCC-------C
T ss_pred cHHHHHHHHH-HHHCCCcEEEEccCCCCCCcEE
Confidence 5899999999 8999999999999999999763
No 239
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.22 E-value=9e-05 Score=69.36 Aligned_cols=95 Identities=20% Similarity=0.334 Sum_probs=63.2
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccc------------------eee----------------eec
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVG------------------GLL----------------QYG 158 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~g------------------g~~----------------~~~ 158 (276)
.|.|||+|++ |+.+|..|++.|.+|+|+|+.+... |.+ .++
T Consensus 25 DVvIVGgG~A-----Gl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 99 (591)
T 3i3l_A 25 KVAIIGGGPA-----GSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWG 99 (591)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECS
T ss_pred CEEEECcCHH-----HHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEec
Confidence 4445999999 9999999999999999999875221 010 000
Q ss_pred C-----------CC---------CCCc-HHHHHHHHHHHHhcCcEEEeeeeecc---c------c----chhhhhcccCE
Q psy12810 159 I-----------PT---------MKLS-KEVVQRRVKLLAAEGIEFKTNINVGK---D------I----AAKELYEEFDA 204 (276)
Q Consensus 159 ~-----------~~---------~~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~---~------~----~~~~~~~~~D~ 204 (276)
. +. +..+ ..+...+.+.+.+.|++++.++.|.. + + ++...++.+|.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~Adl 179 (591)
T 3i3l_A 100 QDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDF 179 (591)
T ss_dssp SSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESE
T ss_pred CCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCE
Confidence 0 00 0112 34555667777788999999876641 1 1 11114688999
Q ss_pred EEEcCCCC
Q psy12810 205 LLLCTGAT 212 (276)
Q Consensus 205 vVlAtG~~ 212 (276)
||.|+|..
T Consensus 180 VV~AdG~~ 187 (591)
T 3i3l_A 180 VIDAGGSG 187 (591)
T ss_dssp EEECCGGG
T ss_pred EEECCCCc
Confidence 99999976
No 240
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.21 E-value=0.0016 Score=56.34 Aligned_cols=46 Identities=24% Similarity=0.309 Sum_probs=34.1
Q ss_pred CcHHHHHHHHHHHHhcCcEEEeeeeeccccchhhhhcccCEEEEcCCCC
Q psy12810 164 LSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 164 ~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~~~~~~~~~D~vVlAtG~~ 212 (276)
.+..+...+.+.+++.|++++. +.|.. .. ....+.+|.||+|+|.+
T Consensus 140 ~p~~~~~~l~~~~~~~Gv~i~~-~~V~~-i~-~~~~~~a~~VV~A~G~~ 185 (351)
T 3g3e_A 140 EGKNYLQWLTERLTERGVKFFQ-RKVES-FE-EVAREGADVIVNCTGVW 185 (351)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEE-CCCCC-HH-HHHHTTCSEEEECCGGG
T ss_pred cHHHHHHHHHHHHHHCCCEEEE-EEeCC-HH-HhhcCCCCEEEECCCcC
Confidence 3456777888888899999988 76642 11 11237899999999987
No 241
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.13 E-value=0.00011 Score=68.95 Aligned_cols=33 Identities=12% Similarity=-0.025 Sum_probs=29.2
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
..+.|||+|++ |+++|..|++.|.+|+|+|+.+
T Consensus 22 yDVIVIGgG~A-----Gl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 22 YDVIVVGAGHA-----GCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECccHH-----HHHHHHHHHHCCCcEEEEEecc
Confidence 34445999999 9999999999999999999874
No 242
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.12 E-value=0.00015 Score=66.09 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=29.0
Q ss_pred ccchhchHHHHHhh-CCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHL-VGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~-~G~~V~l~Ek~~~lGG~~~ 75 (276)
+++||+||+. |++ .|++|+|+|+++++||.+.
T Consensus 19 GisGLsaA~~-L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 19 GPTGLGAAKR-LNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp SHHHHHHHHH-HHHHCCSCEEEEESSSSCCGGGC
T ss_pred cHHHHHHHHH-HHhhCCCCEEEEECCCCCcCCee
Confidence 6999999999 776 5999999999999999774
No 243
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.11 E-value=0.00025 Score=63.73 Aligned_cols=28 Identities=18% Similarity=0.067 Sum_probs=24.3
Q ss_pred ccchhchHHHHHhhCC-CeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVG-HSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G-~~V~l~Ek~~~lG 71 (276)
+++|+++|+. |+++| ++|+|+||...+|
T Consensus 32 GiaGls~A~~-La~~G~~~V~vlE~~~~~~ 60 (448)
T 3axb_A 32 GVVGLAAAYY-LKVWSGGSVLVVDAGHAPG 60 (448)
T ss_dssp SHHHHHHHHH-HHHHHCSCEEEEESSSSTT
T ss_pred CHHHHHHHHH-HHhCCCCcEEEEccCCCCC
Confidence 6899999999 89999 9999999944454
No 244
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.11 E-value=0.00013 Score=66.77 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=64.9
Q ss_pred ccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccce-------------------eee------------e-
Q psy12810 110 KDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGG-------------------LLQ------------Y- 157 (276)
Q Consensus 110 ~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg-------------------~~~------------~- 157 (276)
.++.|.|||+||+ |+.+|..|++.|.+|+|||+.+.... ++. +
T Consensus 11 ~~~dVlIVGaGpa-----Gl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~ 85 (499)
T 2qa2_A 11 SDASVIVVGAGPA-----GLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFG 85 (499)
T ss_dssp CCEEEEEECCSHH-----HHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEET
T ss_pred CCCCEEEECcCHH-----HHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceec
Confidence 3444556999999 99999999999999999998764321 000 0
Q ss_pred ----c---CC-CC----CCc-HHHHHHHHHHHHhcCcEEEeeeeecc---c-----c--chh--hhhcccCEEEEcCCCC
Q psy12810 158 ----G---IP-TM----KLS-KEVVQRRVKLLAAEGIEFKTNINVGK---D-----I--AAK--ELYEEFDALLLCTGAT 212 (276)
Q Consensus 158 ----~---~~-~~----~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~---~-----~--~~~--~~~~~~D~vVlAtG~~ 212 (276)
. .+ .+ ..+ ..+...+.+.+.+.|++++++++++. + + .+. ..++.+|.||.|.|.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 86 GRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp TEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred ceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 0 00 00 011 34455566777788999999987651 0 1 111 1257899999999987
No 245
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.10 E-value=0.00015 Score=67.86 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=30.9
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhC------CcEEEEEcCCCccc
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIV------GHSVTVFERNDRVG 152 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~------G~~Vtvie~~~~~g 152 (276)
..|.|||+||+ |+.+|..|++. |.+|+|||+.+.++
T Consensus 36 ~DVvIVGaG~a-----GlaaA~~La~~~~~~~~G~~V~vlEk~~~~g 77 (584)
T 2gmh_A 36 ADVVIVGAGPA-----GLSAATRLKQLAAQHEKDLRVCLVEKAAHIG 77 (584)
T ss_dssp CSEEEECCSHH-----HHHHHHHHHHHHHHTTCCCCEEEECSSSSTT
T ss_pred CCEEEECcCHH-----HHHHHHHHHhcccccCCCCcEEEEeCCCCCC
Confidence 34445999999 99999999998 99999999987654
No 246
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.07 E-value=0.0002 Score=63.20 Aligned_cols=70 Identities=21% Similarity=0.141 Sum_probs=45.9
Q ss_pred hHHHhhhhhhccc-c---ccceeeccccchhcc-c---cccccccc---ccchhchHHHHHhhCCCeEEEeccC-CCCCc
Q psy12810 5 HQLEKRLDNTLIQ-E---CEPVLSGKVPRIDLE-Y---TINNECRA---FTATLSYHISIQHLVGHSVTVFERN-DRVGG 72 (276)
Q Consensus 5 ~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~-~---~~~~~~~~---~paGl~aA~~~aa~~G~~V~l~Ek~-~~lGG 72 (276)
.+|+..|.|-.+. . .+|+....++..... . ....++-. +++||.||+. |++.|++|+|||++ +++||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~V~IIGAGiaGL~aA~~-L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 4 MTYEQLARELLLVGPAPTNEDLKLRYLDVLIDNGLNPPGPPKRILIVGAGIAGLVAGDL-LTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp CHHHHHHHHHHTBCCTTTCCBHHHHHHHHHHTSCSSSCCSCCEEEEECCBHHHHHHHHH-HHHTSCEEEEECSCSSCCBT
T ss_pred HHHHHHHHhhhccCcccCCCCCChhHHHHHHhccCCCCCCCceEEEECCCHHHHHHHHH-HHHCCCcEEEEeccccccCC
Confidence 4788888888771 1 144544433322211 0 01111111 6899999999 89999999999999 99999
Q ss_pred eee
Q psy12810 73 LLQ 75 (276)
Q Consensus 73 ~~~ 75 (276)
.+.
T Consensus 83 r~~ 85 (376)
T 2e1m_A 83 RIK 85 (376)
T ss_dssp TCC
T ss_pred cee
Confidence 774
No 247
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.06 E-value=0.0003 Score=60.75 Aligned_cols=92 Identities=12% Similarity=-0.028 Sum_probs=53.4
Q ss_pred hhhhccccccceeeccccchhcccccccccc-------------------------------c-----ccchhchHHHHH
Q psy12810 11 LDNTLIQECEPVLSGKVPRIDLEYTINNECR-------------------------------A-----FTATLSYHISIQ 54 (276)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~-----~paGl~aA~~~a 54 (276)
|.++....--.|+|+.|+||..|+.+...-+ . +|+|++||+. |
T Consensus 6 ~~~~~~~~~~~v~~~~~er~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~IiG~G~aGl~aA~~-l 84 (326)
T 2gjc_A 6 TATSTSASQLHLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYV-I 84 (326)
T ss_dssp ----------CGGGSCCCCTTTTTCCSTTCTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHH-H
T ss_pred cccccccCccccchHHHHHHHHHHHHhcCCCccccccccccccchhhhhhhhhhhcccCcCCEEEECccHHHHHHHHH-H
Confidence 4444333335688999999988765433221 1 4899999999 7
Q ss_pred hhC--CCeEEEeccCCCCCceeeecCCCCCCCHHHHHHHHHHHHhCCCeEEe
Q psy12810 55 HLV--GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKT 104 (276)
Q Consensus 55 a~~--G~~V~l~Ek~~~lGG~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~ 104 (276)
+++ |++|+|+|+++.+||.+.++...+..... .......+.+.|+.+..
T Consensus 85 a~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~-~~~~~~~L~~~Gv~~~~ 135 (326)
T 2gjc_A 85 AKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVM-RKPAHLFLQELEIPYED 135 (326)
T ss_dssp HHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEE-ETTTHHHHHHTTCCCEE
T ss_pred HhcCCCCeEEEEecCccccccccccCcccchhhh-hhHHHHHHHhhCccccc
Confidence 888 99999999999888655433221111100 01123455677777654
No 248
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.00 E-value=0.00016 Score=64.08 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=29.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
|.|||+|++ |+.+|..|++.|++|+|+|+.+..
T Consensus 8 V~IVGaG~a-----Gl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 8 IAVVGGSIS-----GLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCEEEEECSSSSS
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCCEEEEecCCCC
Confidence 445999999 999999999999999999987653
No 249
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.97 E-value=0.0011 Score=64.48 Aligned_cols=49 Identities=16% Similarity=0.266 Sum_probs=35.9
Q ss_pred CcHHHHHHHHHHHHhcCcEEEeeeeecc-c--------cchhhhhcccCEEEEcCCCC
Q psy12810 164 LSKEVVQRRVKLLAAEGIEFKTNINVGK-D--------IAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 164 ~~~~~~~~~~~~l~~~gv~i~~~~~v~~-~--------~~~~~~~~~~D~vVlAtG~~ 212 (276)
.+..+...+.+.+.+.|+++++++.|+. . +.....++.+|.||+|+|.+
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G~i~Ad~VV~AaG~~ 206 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADGVIPADIVVSCAGFW 206 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTEEEECSEEEECCGGG
T ss_pred cHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCcEEECCEEEECCccc
Confidence 3456777888888899999999987751 1 11112257899999999986
No 250
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=96.97 E-value=0.00027 Score=63.04 Aligned_cols=32 Identities=22% Similarity=0.215 Sum_probs=29.9
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+++|++||+. |+++|++|+|+|+++++||.|.
T Consensus 10 G~aGl~aA~~-L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 10 GFSGLKAARD-LTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp BHHHHHHHHH-HHHTTCCEEEECSSSSSBTTCC
T ss_pred cHHHHHHHHH-HHHcCCeEEEEecCCCccCeec
Confidence 6899999999 8999999999999999999884
No 251
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.96 E-value=0.00079 Score=60.21 Aligned_cols=29 Identities=21% Similarity=0.173 Sum_probs=26.8
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCc
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGG 72 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG 72 (276)
+|||+.||+. |+++|++|+|+||++.+|+
T Consensus 36 G~AGl~aA~~-La~~G~~V~llEk~~~~g~ 64 (417)
T 3v76_A 36 GAAGMMCAIE-AGKRGRRVLVIDHARAPGE 64 (417)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCH
T ss_pred CHHHHHHHHH-HHHCCCcEEEEeCCCCCCc
Confidence 6999999999 8999999999999988864
No 252
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.96 E-value=0.00021 Score=63.54 Aligned_cols=32 Identities=13% Similarity=0.127 Sum_probs=28.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhC--CcEEEEEcCCC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIV--GHSVTVFERND 149 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~--G~~Vtvie~~~ 149 (276)
.+.|||+|.+ |+.+|..|++. |.+|+|||+..
T Consensus 38 dVvIIGaGi~-----Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 38 DIVVIGAGRM-----GAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CEEEECCcHH-----HHHHHHHHHhcCCCCeEEEEeCCC
Confidence 4445999999 99999999999 99999999865
No 253
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.93 E-value=0.00031 Score=64.31 Aligned_cols=32 Identities=19% Similarity=-0.015 Sum_probs=28.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
.+.|||+|.+ |+.+|..|++.|.+|+|+|+.+
T Consensus 5 DVvIIGgGi~-----G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 5 DLIVIGGGIN-----GAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHH-----HHHHHHHHHhCCCCEEEEECCC
Confidence 3445999999 9999999999999999999875
No 254
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.93 E-value=0.0012 Score=51.50 Aligned_cols=64 Identities=17% Similarity=0.121 Sum_probs=45.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCcee-ee-cCCCC---CCCHHHHHHHHHHHHhCCCeEEecccc
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLL-QY-GIPTM---KLSKEVVQRRVKLLAAEGIEFKTNINV 108 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~-~~-~~~~~---~~~~~~~~~~~~~l~~~gv~~~~~~~v 108 (276)
+|+|+++|.. +++.|.+|+|+|+++.+-... .. ..|.+ ....++.+...+.+++.|++++++ ++
T Consensus 10 G~~Gl~~A~~-l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v 78 (180)
T 2ywl_A 10 GPSGLSAALF-LARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VV 78 (180)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CC
T ss_pred CHHHHHHHHH-HHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EE
Confidence 5899999999 899999999999976221100 00 01222 223677788888899999999988 54
No 255
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.92 E-value=0.0046 Score=58.52 Aligned_cols=27 Identities=19% Similarity=0.005 Sum_probs=24.7
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRV 70 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~l 70 (276)
+.|||+||+. |+++|++|+|+||.+..
T Consensus 14 G~AGL~AAl~-aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 14 GLAGLRAAVA-TQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp SHHHHHHHHH-HHTTTCCEEEECSSCGG
T ss_pred hHHHHHHHHH-HHHCCCcEEEEeccCCC
Confidence 6899999999 89999999999998754
No 256
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.90 E-value=0.00047 Score=64.07 Aligned_cols=34 Identities=18% Similarity=0.059 Sum_probs=29.7
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
+.+.|||+|++ |+.+|..|++.|.+|+|+|+.+.
T Consensus 19 ~DVvVIGgGi~-----Gl~~A~~La~~G~~V~LlEk~d~ 52 (561)
T 3da1_A 19 LDLLVIGGGIT-----GAGIALDAQVRGIQTGLVEMNDF 52 (561)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHTTTCCEEEEESSST
T ss_pred CCEEEECCCHH-----HHHHHHHHHhCCCcEEEEECCCC
Confidence 34445999999 99999999999999999999753
No 257
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.88 E-value=0.00034 Score=61.89 Aligned_cols=33 Identities=18% Similarity=0.306 Sum_probs=29.4
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
.+.|||+|++ |+.+|..|++.|.+|+|||+.+.
T Consensus 28 dV~IVGaG~a-----Gl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 28 NVAIIGGGPV-----GLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp EEEEECCSHH-----HHHHHHHHHTTTCEEEEEECSSS
T ss_pred CEEEECCCHH-----HHHHHHHHHHCCCCEEEEeCCCC
Confidence 3445999999 99999999999999999998764
No 258
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.84 E-value=0.0001 Score=67.30 Aligned_cols=41 Identities=22% Similarity=0.270 Sum_probs=35.3
Q ss_pred cchhhhccCCCCCCCCCCCCcchhhhh-CCcEEEEEcCCCccceeee
Q psy12810 111 DIAAKVTNHTPQSDNQTKHCPPLIVNI-VGHSVTVFERNDRVGGLLQ 156 (276)
Q Consensus 111 ~v~v~iiG~gp~~~g~~Gl~~A~~l~~-~G~~Vtvie~~~~~gg~~~ 156 (276)
++.|.|||||++ |+++|..|++ .|++|+|+|+.+++||..+
T Consensus 10 ~~DVvIIGaGis-----GLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 10 SVDVLVIGAGPT-----GLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp EEEEEEECCSHH-----HHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCEEEECCcHH-----HHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 344556999999 9999999987 5999999999999999553
No 259
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.82 E-value=0.00048 Score=61.32 Aligned_cols=32 Identities=22% Similarity=0.239 Sum_probs=29.7
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+++||+||+. |+++|++|+|+||++.+||.+.
T Consensus 9 GiaGLsaA~~-La~~G~~V~vlE~~~~~GG~~~ 40 (421)
T 3nrn_A 9 GLGGLLAGAF-LARNGHEIIVLEKSAMIGGRFT 40 (421)
T ss_dssp SHHHHHHHHH-HHHTTCEEEEECSSSSSCTTSS
T ss_pred CHHHHHHHHH-HHHCCCeEEEEeCCCCCCceeE
Confidence 5899999999 8999999999999999999774
No 260
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.79 E-value=0.00042 Score=65.16 Aligned_cols=29 Identities=10% Similarity=-0.062 Sum_probs=25.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCc
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGG 72 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG 72 (276)
++|||.||+. |+++|++|+|+||....||
T Consensus 27 G~AGl~AAl~-aa~~G~~V~vlEK~~~~~g 55 (621)
T 2h88_A 27 GGAGLRAAFG-LSEAGFNTACVTKLFPTRS 55 (621)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESSCGGGS
T ss_pred cHHHHHHHHH-HHHCCCcEEEEeccCCCCC
Confidence 6999999999 8999999999999865443
No 261
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=96.78 E-value=0.00013 Score=66.59 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=27.1
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcccee
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGL 154 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~ 154 (276)
|||+|.+ |+++|..|++.|++|+|+|+.+++||.
T Consensus 6 VIGaG~~-----GL~aA~~La~~G~~V~VlEa~~~~GG~ 39 (501)
T 4dgk_A 6 VIGAGFG-----GLALAIRLQAAGIPVLLLEQRDKPGGR 39 (501)
T ss_dssp EECCHHH-----HHHHHHHHHHTTCCEEEECCC------
T ss_pred EECCcHH-----HHHHHHHHHHCCCcEEEEccCCCCCCc
Confidence 4999999 999999999999999999999999873
No 262
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=96.74 E-value=0.0022 Score=54.08 Aligned_cols=30 Identities=23% Similarity=0.119 Sum_probs=27.1
Q ss_pred ccchhchHHHHHhhC-CCeEEEeccCCCCCce
Q psy12810 43 FTATLSYHISIQHLV-GHSVTVFERNDRVGGL 73 (276)
Q Consensus 43 ~paGl~aA~~~aa~~-G~~V~l~Ek~~~lGG~ 73 (276)
+|+|++||+. |+++ |++|+|+||++.+||.
T Consensus 48 G~aGl~aA~~-la~~~G~~V~viEk~~~~gg~ 78 (284)
T 1rp0_A 48 GSAGLSAAYE-ISKNPNVQVAIIEQSVSPGGG 78 (284)
T ss_dssp SHHHHHHHHH-HHTSTTSCEEEEESSSSCCTT
T ss_pred cHHHHHHHHH-HHHcCCCeEEEEECCCCCCCc
Confidence 6999999999 8887 9999999999888764
No 263
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=96.73 E-value=0.0006 Score=60.70 Aligned_cols=32 Identities=34% Similarity=0.454 Sum_probs=29.6
Q ss_pred ccchhchHHHHHhhCC-CeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVG-HSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G-~~V~l~Ek~~~lGG~~~ 75 (276)
+++||+||+. ++++| ++|+|+|+++++||.+.
T Consensus 15 G~aGl~aA~~-L~~~g~~~v~v~E~~~~~GG~~~ 47 (424)
T 2b9w_A 15 GPAGLAAGMY-LEQAGFHDYTILERTDHVGGKCH 47 (424)
T ss_dssp SHHHHHHHHH-HHHTTCCCEEEECSSSCSSTTCC
T ss_pred CHHHHHHHHH-HHhCCCCcEEEEECCCCCCCccc
Confidence 6999999999 89999 99999999999999763
No 264
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=96.71 E-value=0.00063 Score=61.44 Aligned_cols=32 Identities=16% Similarity=0.100 Sum_probs=29.9
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+++|++||.. |+++|++|+|+||++++||.+.
T Consensus 20 G~~GL~aA~~-La~~G~~V~vlE~~~~~GG~~~ 51 (453)
T 2bcg_G 20 GITECILSGL-LSVDGKKVLHIDKQDHYGGEAA 51 (453)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCGGGC
T ss_pred CHHHHHHHHH-HHHCCCeEEEEeCCCCCCcccc
Confidence 6899999999 8999999999999999999764
No 265
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.70 E-value=0.0014 Score=58.79 Aligned_cols=31 Identities=13% Similarity=0.088 Sum_probs=28.2
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
|.|||+||+ |+.+|..|++.|++|+|||+.+
T Consensus 25 ViIVGaGpa-----Gl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 25 IGIVGAGTA-----GLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp EEEECCHHH-----HHHHHHHHHHTTCEEEEEESCC
T ss_pred EEEECCcHH-----HHHHHHHHHHCCCeEEEEcCCC
Confidence 334999999 9999999999999999999876
No 266
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.68 E-value=0.00064 Score=60.42 Aligned_cols=32 Identities=31% Similarity=0.304 Sum_probs=29.4
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+.+||+||+. |+++|++|+|+|+++.+||.+.
T Consensus 9 GiaGLsaA~~-La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 9 GLGGLLSAAR-LSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp BHHHHHHHHH-HHHTTCEEEEECSSSSSBTTSS
T ss_pred CHHHHHHHHH-HHhCCCceEEEeCCCCCCCcee
Confidence 5799999999 8999999999999999999763
No 267
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.65 E-value=0.00078 Score=58.83 Aligned_cols=28 Identities=11% Similarity=0.054 Sum_probs=25.8
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lG 71 (276)
+|||+++|+. |+++|++|+|+||++.+|
T Consensus 13 GpaGl~~A~~-La~~G~~V~v~Er~~~~~ 40 (397)
T 3oz2_A 13 GPGGSTAARY-AAKYGLKTLMIEKRPEIG 40 (397)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSTT
T ss_pred CHHHHHHHHH-HHHCCCcEEEEeCCCCCC
Confidence 7999999999 899999999999987665
No 268
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=96.53 E-value=0.001 Score=58.37 Aligned_cols=32 Identities=16% Similarity=0.107 Sum_probs=29.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+++|++||.. |++.|++|+|+|+++.+||.+.
T Consensus 10 G~~Gl~~A~~-l~~~g~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 10 GLFGAVCANE-LKKLNKKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp SHHHHHHHHH-HGGGTCCEEEECSSSSSSGGGC
T ss_pred CHHHHHHHHH-HHhCCCcEEEEecCCCCCcceE
Confidence 6899999999 8999999999999999999873
No 269
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.52 E-value=0.0009 Score=61.37 Aligned_cols=31 Identities=39% Similarity=0.435 Sum_probs=29.2
Q ss_pred ccchhchHHHHHhhCC-CeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVG-HSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G-~~V~l~Ek~~~lGG~~ 74 (276)
++|||+||+. |++.| ++|+|+|+++++||.+
T Consensus 17 G~aGL~AA~~-L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 17 GIAGLKAAST-LHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp BHHHHHHHHH-HHHTTCCSEEEECSSSSSBTTC
T ss_pred CHHHHHHHHH-HHhcCCCCEEEEeCCCCCCCce
Confidence 6899999999 89999 9999999999999966
No 270
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.51 E-value=0.00085 Score=62.88 Aligned_cols=34 Identities=0% Similarity=-0.016 Sum_probs=29.4
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCC--cEEEEEcCCCcc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVG--HSVTVFERNDRV 151 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G--~~Vtvie~~~~~ 151 (276)
.|.|||+|++ |+.+|..|++.| .+|+|+|+.+..
T Consensus 7 DVvIVG~G~A-----Gl~aAl~la~~G~~~~V~vlEk~~~~ 42 (602)
T 1kf6_A 7 DLAIVGAGGA-----GLRAAIAAAQANPNAKIALISKVYPM 42 (602)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHHCTTCCEEEEESSCGG
T ss_pred CEEEECCCHH-----HHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 3445999999 999999999999 999999997643
No 271
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=96.51 E-value=0.00094 Score=61.26 Aligned_cols=32 Identities=31% Similarity=0.301 Sum_probs=29.7
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
++|||+||+. |+++|++|+|+|+++++||.+.
T Consensus 13 G~aGL~aA~~-L~~~G~~V~vlE~~~~~GGr~~ 44 (520)
T 1s3e_A 13 GISGMAAAKL-LHDSGLNVVVLEARDRVGGRTY 44 (520)
T ss_dssp BHHHHHHHHH-HHHTTCCEEEECSSSSSBTTCC
T ss_pred CHHHHHHHHH-HHHCCCCEEEEeCCCCCCCcee
Confidence 6899999999 8999999999999999999773
No 272
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=96.50 E-value=0.00091 Score=59.37 Aligned_cols=32 Identities=22% Similarity=0.128 Sum_probs=29.6
Q ss_pred ccchhchHHHHHhhC-CCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLV-GHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~-G~~V~l~Ek~~~lGG~~~ 75 (276)
+++|++||+. |++. |++|+|+|+++++||.+.
T Consensus 16 G~~Gl~aA~~-L~~~~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 16 GFFGLTIAER-VATQLDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp SHHHHHHHHH-HHHHSCCCEEEECSSSSSSGGGC
T ss_pred CHHHHHHHHH-HHHhCCCCEEEEeCCCCCCCeee
Confidence 6899999999 7888 999999999999999874
No 273
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.50 E-value=0.0011 Score=59.59 Aligned_cols=59 Identities=27% Similarity=0.255 Sum_probs=41.2
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeee----c----C-CCCCCCHHHHHHHHHHHHhCCCeEEe
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQY----G----I-PTMKLSKEVVQRRVKLLAAEGIEFKT 104 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~----~----~-~~~~~~~~~~~~~~~~l~~~gv~~~~ 104 (276)
+++||+||+. |+++|++|+|+|+++++||.+.- + . +.+..+. .....+.+++.|++...
T Consensus 14 G~~Gl~aA~~-l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~--~~~~~~~~~~~g~~~~~ 81 (453)
T 2yg5_A 14 GPSGLAAATA-LRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPD--QTALISLLDELGLKTFE 81 (453)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTT--CHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHH-HHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCc--cHHHHHHHHHcCCcccc
Confidence 6999999999 89999999999999999997731 1 1 1111111 22334567778887644
No 274
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.40 E-value=0.0018 Score=59.24 Aligned_cols=19 Identities=32% Similarity=0.300 Sum_probs=15.2
Q ss_pred hhcccCEEEEcCCCCCCCCC
Q psy12810 198 LYEEFDALLLCTGATWPRDL 217 (276)
Q Consensus 198 ~~~~~D~vVlAtG~~~p~~~ 217 (276)
.++++|.||+|||.+ ++.+
T Consensus 394 ~~~~~D~VI~ATGy~-~~~p 412 (501)
T 4b63_A 394 ETLEVDALMVATGYN-RNAH 412 (501)
T ss_dssp CEEEESEEEECCCEE-CCTH
T ss_pred eEEECCEEEECcCCC-CCCc
Confidence 457899999999987 6543
No 275
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=96.38 E-value=0.0014 Score=58.15 Aligned_cols=32 Identities=19% Similarity=0.132 Sum_probs=30.0
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+++|++||+. ++++|++|+|+|+++.+||.+.
T Consensus 38 G~aGl~aA~~-l~~~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 38 GFAGSVLAER-LASSGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSSGGGC
T ss_pred cHHHHHHHHH-HHHCCCceEEEeccCCCCCccc
Confidence 6999999999 8999999999999999999884
No 276
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.34 E-value=0.0014 Score=59.20 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=29.6
Q ss_pred ccchhchHHHHHhhCCC--eEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGH--SVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~--~V~l~Ek~~~lGG~~~ 75 (276)
+.+||+||+. |+++|+ +|+|+|+++++||.++
T Consensus 11 GiaGLsaA~~-L~~~G~~~~V~vlEa~~~~GG~~~ 44 (477)
T 3nks_A 11 GISGLAASYH-LSRAPCPPKVVLVESSERLGGWIR 44 (477)
T ss_dssp BHHHHHHHHH-HHTSSSCCEEEEECSSSSSBTTCC
T ss_pred cHHHHHHHHH-HHhCCCCCcEEEEeCCCCCCCceE
Confidence 5899999999 899999 9999999999999773
No 277
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=96.31 E-value=0.0017 Score=58.86 Aligned_cols=31 Identities=32% Similarity=0.337 Sum_probs=29.1
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~ 74 (276)
++|||+||+. |+++|++|+|+|+++++||.+
T Consensus 20 G~aGl~aA~~-L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 20 GPAGLCSAFE-LQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SHHHHHHHHH-HHHTTCEEEEECSSSSSCTTC
T ss_pred CHHHHHHHHH-HHHCCCCEEEEeccCCCCCce
Confidence 6999999999 899999999999999999964
No 278
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.30 E-value=0.0014 Score=59.70 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=29.3
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~ 74 (276)
++|||+||+. |++.|++|+|+|+++++||.+
T Consensus 48 G~aGl~aA~~-l~~~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 48 GYCGLTATRD-LTVAGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp BHHHHHHHHH-HHHTTCCEEEECSSSBSBTTC
T ss_pred cHHHHHHHHH-HHHCCCCEEEEeCCCCCCCcc
Confidence 6999999999 899999999999999999976
No 279
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=96.27 E-value=0.00055 Score=61.84 Aligned_cols=39 Identities=15% Similarity=0.191 Sum_probs=35.0
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQ 156 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~ 156 (276)
.+.|||+|.+ |+.+|..|++.|++|+|+|+++++||.+.
T Consensus 13 dvvVIGaG~~-----GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 51 (453)
T 2bcg_G 13 DVIVLGTGIT-----ECILSGLLSVDGKKVLHIDKQDHYGGEAA 51 (453)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCeEEEEeCCCCCCcccc
Confidence 4445999999 99999999999999999999999998654
No 280
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=96.27 E-value=0.0015 Score=58.98 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=29.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+++||+||+. |+++|++|+|+|+++++||.+.
T Consensus 25 G~~Gl~aa~~-l~~~g~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 25 GISGLAVAHH-LRSRGTDAVLLESSARLGGAVG 56 (478)
T ss_dssp BHHHHHHHHH-HHTTTCCEEEECSSSSSBTTCC
T ss_pred CHHHHHHHHH-HHHCCCCEEEEEcCCCCCceee
Confidence 6899999999 8999999999999999999763
No 281
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.27 E-value=0.0043 Score=56.00 Aligned_cols=80 Identities=18% Similarity=0.162 Sum_probs=57.0
Q ss_pred CccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeee
Q psy12810 109 GKDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 188 (276)
Q Consensus 109 ~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~ 188 (276)
++++.+ +|.|++ |+++|..|.++|++|++.|..+.. .+ ...+.+++.|++++.+..
T Consensus 9 ~k~v~v--iG~G~s-----G~s~A~~l~~~G~~V~~~D~~~~~------------~~-----~~~~~L~~~gi~~~~g~~ 64 (451)
T 3lk7_A 9 NKKVLV--LGLARS-----GEAAARLLAKLGAIVTVNDGKPFD------------EN-----PTAQSLLEEGIKVVCGSH 64 (451)
T ss_dssp TCEEEE--ECCTTT-----HHHHHHHHHHTTCEEEEEESSCGG------------GC-----HHHHHHHHTTCEEEESCC
T ss_pred CCEEEE--EeeCHH-----HHHHHHHHHhCCCEEEEEeCCccc------------CC-----hHHHHHHhCCCEEEECCC
Confidence 345555 999999 999999999999999999986531 01 223457788999988764
Q ss_pred eccccchhhhhcc-cCEEEEcCCCCCCCCCCC
Q psy12810 189 VGKDIAAKELYEE-FDALLLCTGATWPRDLPI 219 (276)
Q Consensus 189 v~~~~~~~~~~~~-~D~vVlAtG~~~p~~~~i 219 (276)
.. ...-. +|.||++.|-. +..|.+
T Consensus 65 ~~------~~~~~~~d~vv~spgi~-~~~p~~ 89 (451)
T 3lk7_A 65 PL------ELLDEDFCYMIKNPGIP-YNNPMV 89 (451)
T ss_dssp CG------GGGGSCEEEEEECTTSC-TTSHHH
T ss_pred hH------HhhcCCCCEEEECCcCC-CCChhH
Confidence 21 11123 89999999986 655543
No 282
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=96.24 E-value=0.0019 Score=58.80 Aligned_cols=31 Identities=32% Similarity=0.430 Sum_probs=29.2
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~ 74 (276)
+++||+||+. |+++|++|+|+|+++++||.+
T Consensus 22 G~~Gl~aA~~-l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 22 GVSGLAAAYK-LKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp SHHHHHHHHH-HHTTSCEEEEECSSSSSCSSC
T ss_pred CHHHHHHHHH-HHHCCCcEEEEEeCCCCCCce
Confidence 6999999999 899999999999999999976
No 283
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.21 E-value=0.002 Score=56.89 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=29.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+++|+++|.. +++.|++|+|+|+++.+||.+.
T Consensus 12 G~~Gl~~A~~-l~~~g~~v~v~E~~~~~GG~~~ 43 (384)
T 2bi7_A 12 GFSGAVIGRQ-LAEKGHQVHIIDQRDHIGGNSY 43 (384)
T ss_dssp SHHHHHHHHH-HHTTTCEEEEEESSSSSSGGGC
T ss_pred CHHHHHHHHH-HHHCCCcEEEEEecCCcCCccc
Confidence 6899999999 8999999999999999999773
No 284
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=96.16 E-value=0.00061 Score=60.63 Aligned_cols=38 Identities=26% Similarity=0.461 Sum_probs=33.9
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCC-cEEEEEcCCCccceee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVG-HSVTVFERNDRVGGLL 155 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G-~~Vtvie~~~~~gg~~ 155 (276)
.+.|||+|++ |+.+|..|++.| ++|+|+|+.+++||..
T Consensus 8 ~v~IIGaG~a-----Gl~aA~~L~~~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 8 RIAIIGAGPA-----GLAAGMYLEQAGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp CEEEECCSHH-----HHHHHHHHHHTTCCCEEEECSSSCSSTTC
T ss_pred CEEEECcCHH-----HHHHHHHHHhCCCCcEEEEECCCCCCCcc
Confidence 3445999999 999999999999 9999999999998854
No 285
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.16 E-value=0.00066 Score=60.35 Aligned_cols=34 Identities=29% Similarity=0.310 Sum_probs=31.1
Q ss_pred hhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccce
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGG 153 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg 153 (276)
.|||+|.+ |+++|..|++.|++|+|+|+.+.+||
T Consensus 4 vVIGaGia-----GLsaA~~La~~G~~V~vlE~~~~~GG 37 (425)
T 3ka7_A 4 VVIGAGLG-----GLLSAARLSKAGHEVEVFERLPITGG 37 (425)
T ss_dssp EEECCBHH-----HHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred EEECCCHH-----HHHHHHHHHhCCCceEEEeCCCCCCC
Confidence 35999999 99999999999999999999988765
No 286
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.07 E-value=0.0009 Score=59.55 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=31.1
Q ss_pred hhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccce
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGG 153 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg 153 (276)
.|||+|.+ |+.+|..|++.|++|+|+|+.+.+||
T Consensus 4 vVIGaGia-----GLsaA~~La~~G~~V~vlE~~~~~GG 37 (421)
T 3nrn_A 4 VVVGAGLG-----GLLAGAFLARNGHEIIVLEKSAMIGG 37 (421)
T ss_dssp EEESCSHH-----HHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred EEECCCHH-----HHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 34999999 99999999999999999999988765
No 287
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.06 E-value=0.00069 Score=62.15 Aligned_cols=37 Identities=22% Similarity=0.239 Sum_probs=33.3
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCC-cEEEEEcCCCcccee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVG-HSVTVFERNDRVGGL 154 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G-~~Vtvie~~~~~gg~ 154 (276)
.|.|||+|.+ |+.+|..|++.| ++|+|+|+.+++||.
T Consensus 10 ~VvIIGaG~a-----GL~AA~~L~~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 10 KVIIIGAGIA-----GLKAASTLHQNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEECCBHH-----HHHHHHHHHHTTCCSEEEECSSSSSBTT
T ss_pred cEEEECCCHH-----HHHHHHHHHhcCCCCEEEEeCCCCCCCc
Confidence 3445999999 999999999999 999999999998874
No 288
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.00 E-value=0.00094 Score=58.74 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=29.8
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
.|.|||+||+ |+.+|..|++.|++|+|||+.+.+
T Consensus 3 ~V~IVGaGpa-----Gl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIG-----GTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCEEEEECSSCSS
T ss_pred EEEEECcCHH-----HHHHHHHHHhCCCCEEEEecCCCC
Confidence 3456999999 999999999999999999987643
No 289
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=95.98 E-value=0.007 Score=55.96 Aligned_cols=27 Identities=19% Similarity=0.156 Sum_probs=24.7
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRV 70 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~l 70 (276)
+|+|++||+. |+++|++|+|+||.+.+
T Consensus 116 GpaGL~aA~~-La~~G~kV~VlEr~~~~ 142 (549)
T 3nlc_A 116 GPCGLFAGLV-LAQMGFNPIIVERGKEV 142 (549)
T ss_dssp SHHHHHHHHH-HHHTTCCCEEECSSCCH
T ss_pred CHHHHHHHHH-HHHCCCeEEEEEccCcc
Confidence 6999999999 89999999999998654
No 290
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=95.98 E-value=0.00093 Score=58.86 Aligned_cols=39 Identities=26% Similarity=0.397 Sum_probs=34.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCC-Cccceeee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERN-DRVGGLLQ 156 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~-~~~gg~~~ 156 (276)
.+.|||+|++ |+.+|..|++.|++|+|+|+. +++||.+.
T Consensus 46 ~V~IIGAGia-----GL~aA~~L~~~G~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 46 RILIVGAGIA-----GLVAGDLLTRAGHDVTILEANANRVGGRIK 85 (376)
T ss_dssp EEEEECCBHH-----HHHHHHHHHHTSCEEEEECSCSSCCBTTCC
T ss_pred eEEEECCCHH-----HHHHHHHHHHCCCcEEEEeccccccCCcee
Confidence 4445999999 999999999999999999999 99988554
No 291
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=95.98 E-value=0.0018 Score=58.09 Aligned_cols=31 Identities=23% Similarity=0.169 Sum_probs=28.8
Q ss_pred ccchhchHHHHHhhCC------CeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVG------HSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G------~~V~l~Ek~~~lGG~~ 74 (276)
+++||+||+. |+++| ++|+|+|+++++||.+
T Consensus 14 GiaGLsaA~~-L~~~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 14 GITGLAAAFY-MEKEIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp SHHHHHHHHH-HHHHHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CHHHHHHHHH-HHHhccccCCCCCEEEEECCCCCCceE
Confidence 6899999999 89999 9999999999999865
No 292
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=95.92 E-value=0.0011 Score=60.15 Aligned_cols=38 Identities=29% Similarity=0.446 Sum_probs=34.0
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
.+.|||+|++ |+.+|..|++.|++|+|+|+.+++||..
T Consensus 13 ~v~IIGaG~a-----Gl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 13 SVVVLGGGPA-----GLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CEEEECCCHH-----HHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 4445999999 9999999999999999999999998843
No 293
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=95.92 E-value=0.00096 Score=59.24 Aligned_cols=40 Identities=13% Similarity=0.128 Sum_probs=35.4
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeee
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQ 156 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~ 156 (276)
..+.|||+|++ |+.+|..|++.|++|+|+|+.+++||.+.
T Consensus 30 ~dv~IIGaG~a-----Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 30 FDYLIVGAGFA-----GSVLAERLASSGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSSGGGC
T ss_pred CCEEEECccHH-----HHHHHHHHHHCCCceEEEeccCCCCCccc
Confidence 44455999999 99999999999999999999999988664
No 294
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=95.91 E-value=0.00096 Score=59.43 Aligned_cols=35 Identities=23% Similarity=0.240 Sum_probs=31.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccce
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGG 153 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg 153 (276)
+.|||+|++ |+.+|..|++.|++|+|+|+.+.+||
T Consensus 4 VvVIGaG~a-----Gl~aA~~L~~~G~~V~vlE~~~~~GG 38 (431)
T 3k7m_X 4 AIVVGGGFS-----GLKAARDLTNAGKKVLLLEGGERLGG 38 (431)
T ss_dssp EEEECCBHH-----HHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred EEEECCcHH-----HHHHHHHHHHcCCeEEEEecCCCccC
Confidence 345999999 99999999999999999999887765
No 295
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.91 E-value=0.0026 Score=57.85 Aligned_cols=31 Identities=39% Similarity=0.396 Sum_probs=29.1
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~ 74 (276)
+++||+||+. ++++|++|+|+|+++++||.+
T Consensus 42 G~~Gl~aA~~-l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 42 GMAGLSAAYV-LAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp BHHHHHHHHH-HHHHTCEEEEECSSSSSBTTC
T ss_pred CHHHHHHHHH-HHhCCCeEEEEECCCCCCCce
Confidence 6999999999 899999999999999999966
No 296
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=95.90 E-value=0.001 Score=61.05 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=33.2
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
+.|||+|.+ |+.+|..|++.|++|+|+|+++++||..
T Consensus 7 vvIIGaG~a-----GL~aA~~L~~~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 7 VVVVGGGIS-----GMAAAKLLHDSGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp EEEECCBHH-----HHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCCEEEEeCCCCCCCce
Confidence 445999999 9999999999999999999999988743
No 297
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=95.87 E-value=0.00085 Score=59.56 Aligned_cols=39 Identities=21% Similarity=0.072 Sum_probs=34.5
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhC-CcEEEEEcCCCccceeee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIV-GHSVTVFERNDRVGGLLQ 156 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~-G~~Vtvie~~~~~gg~~~ 156 (276)
.+.|||+|.+ |+.+|..|++. |++|+|+|+.+++||.+.
T Consensus 9 ~v~IiGaG~~-----Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 9 DLFVVGSGFF-----GLTIAERVATQLDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHHSCCCEEEECSSSSSSGGGC
T ss_pred CEEEECCCHH-----HHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 3445999999 99999999998 999999999999988653
No 298
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=95.85 E-value=0.0038 Score=53.42 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=29.1
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+|+|+++|+. |+++|++|+|+||++.+||.+.
T Consensus 11 G~~Gl~~A~~-L~~~G~~V~vlE~~~~~gg~~~ 42 (336)
T 1yvv_A 11 GIAGLSAAQA-LTAAGHQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCGGGC
T ss_pred cHHHHHHHHH-HHHCCCcEEEEECCCCCcccce
Confidence 6999999999 8999999999999988998653
No 299
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=95.84 E-value=0.0012 Score=58.37 Aligned_cols=39 Identities=15% Similarity=0.181 Sum_probs=34.5
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQ 156 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~ 156 (276)
.+.|||+|++ |+.+|..|++.|++|+|+|+.+++||.+.
T Consensus 5 ~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~ 43 (384)
T 2bi7_A 5 KILIVGAGFS-----GAVIGRQLAEKGHQVHIIDQRDHIGGNSY 43 (384)
T ss_dssp EEEEECCSHH-----HHHHHHHHHTTTCEEEEEESSSSSSGGGC
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCcEEEEEecCCcCCccc
Confidence 3445999999 99999999999999999999999988654
No 300
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=95.79 E-value=0.0037 Score=56.88 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=30.1
Q ss_pred ccchhchHHHHHhhCC-CeEEEeccCCCCCceeee
Q psy12810 43 FTATLSYHISIQHLVG-HSVTVFERNDRVGGLLQY 76 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G-~~V~l~Ek~~~lGG~~~~ 76 (276)
+++|++||+. ++++| ++|+|+|+++.+||.+..
T Consensus 18 G~~Gl~~A~~-l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 18 GPTGLGAAVR-LTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp SHHHHHHHHH-HHHTTCCSEEEEESSSSSSGGGCE
T ss_pred CHHHHHHHHH-HHHcCCCCEEEEeCCCCCCCeeee
Confidence 6999999999 89998 899999999999998754
No 301
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.74 E-value=0.012 Score=47.88 Aligned_cols=59 Identities=12% Similarity=-0.018 Sum_probs=39.9
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCC-CCCceeeec--CCCCC--------------CCHHHHHHHHHHHHhC-CCeEEe
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERND-RVGGLLQYG--IPTMK--------------LSKEVVQRRVKLLAAE-GIEFKT 104 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~-~lGG~~~~~--~~~~~--------------~~~~~~~~~~~~l~~~-gv~~~~ 104 (276)
.|+|++||.. ++++|++|+|+|++. .+| +.+. ++.+. ....+..++.+.+++. |++++.
T Consensus 12 G~aGl~aA~~-la~~g~~v~lie~~~~~~G--~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~gv~i~~ 88 (232)
T 2cul_A 12 GFSGAETAFW-LAQKGVRVGLLTQSLDAVM--MPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRPLHLFQ 88 (232)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESCGGGTT--CCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTTEEEEE
T ss_pred CHHHHHHHHH-HHHCCCCEEEEecCCCcCC--cccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 6999999999 899999999999973 344 2211 11110 1124556666778886 998873
No 302
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=95.74 E-value=0.004 Score=53.66 Aligned_cols=32 Identities=13% Similarity=0.055 Sum_probs=28.9
Q ss_pred ccchhchHHHHHhh---CCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHL---VGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~---~G~~V~l~Ek~~~lGG~~~ 75 (276)
+++|+++|+. |++ +|++|+||||++.+||.+.
T Consensus 10 G~aGl~~A~~-L~~~~~~G~~V~v~Ek~~~~gg~~~ 44 (342)
T 3qj4_A 10 GMTGSLCAAL-LRRQTSGPLYLAVWDKADDSGGRMT 44 (342)
T ss_dssp SHHHHHHHHH-HHSCC-CCEEEEEECSSSSSCGGGC
T ss_pred cHHHHHHHHH-HHhhccCCceEEEEECCCCCcccee
Confidence 6899999999 889 9999999999998998653
No 303
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=95.72 E-value=0.0013 Score=59.92 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=33.9
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
.+.|||+|.+ |+.+|..|++.|++|+|+|+.+++||..
T Consensus 41 ~v~iiGaG~a-----Gl~aA~~l~~~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 41 DVIVIGGGYC-----GLTATRDLTVAGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp EEEEECCBHH-----HHHHHHHHHHTTCCEEEECSSSBSBTTC
T ss_pred CEEEECCcHH-----HHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 4445999999 9999999999999999999999998743
No 304
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=95.67 E-value=0.0046 Score=55.41 Aligned_cols=32 Identities=19% Similarity=0.082 Sum_probs=29.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+++|+.||.. +++.|++|+|+|+++.+||.+.
T Consensus 15 G~~gl~~a~~-l~~~g~~v~~~e~~~~~gg~~~ 46 (433)
T 1d5t_A 15 GLTECILSGI-MSVNGKKVLHMDRNPYYGGESS 46 (433)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCTTSC
T ss_pred CHHHHHHHHH-HHHCCCcEEEEecCCCcccccc
Confidence 6899999999 8999999999999999999763
No 305
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=95.66 E-value=0.0013 Score=58.95 Aligned_cols=37 Identities=30% Similarity=0.418 Sum_probs=33.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
+.|||+|++ |+.+|..|++.|++|+|+|+.+++||..
T Consensus 8 v~iiG~G~~-----Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 8 VAIVGAGPS-----GLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 445999999 9999999999999999999999988754
No 306
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.60 E-value=0.0058 Score=53.97 Aligned_cols=47 Identities=11% Similarity=0.006 Sum_probs=25.7
Q ss_pred eccccchhccccccccccc-------ccchhchHHHHHhhCCCeEEEeccCCCCC
Q psy12810 24 SGKVPRIDLEYTINNECRA-------FTATLSYHISIQHLVGHSVTVFERNDRVG 71 (276)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~-------~paGl~aA~~~aa~~G~~V~l~Ek~~~lG 71 (276)
|..++...+....++..++ +|+|+++|+. |+++|++|+||||.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~dV~IVGaG~aGl~~A~~-La~~G~~V~v~E~~~~~~ 59 (407)
T 3rp8_A 6 IHHHHHHSSGENLYFQGHMKAIVIGAGIGGLSAAVA-LKQSGIDCDVYEAVKEIK 59 (407)
T ss_dssp -----------------CCEEEEECCSHHHHHHHHH-HHHTTCEEEEEESSSCC-
T ss_pred cccccccCCCCcccCCCCCEEEEECCCHHHHHHHHH-HHhCCCCEEEEeCCCCCC
Confidence 3344444544444444443 6999999999 899999999999987553
No 307
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=95.58 E-value=0.0015 Score=57.21 Aligned_cols=37 Identities=14% Similarity=0.128 Sum_probs=33.2
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
+.|||+|++ |+.+|..|++.|++|+|+|+.+.+||..
T Consensus 4 v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 4 YIIVGSGLF-----GAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEECCSHH-----HHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred EEEECcCHH-----HHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 345999999 9999999999999999999999988754
No 308
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=95.57 E-value=0.0019 Score=58.33 Aligned_cols=36 Identities=17% Similarity=0.220 Sum_probs=32.0
Q ss_pred hhccCCCCCCCCCCCCcchhhhhCCc--EEEEEcCCCccceee
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIVGH--SVTVFERNDRVGGLL 155 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~G~--~Vtvie~~~~~gg~~ 155 (276)
.|||+|.+ |+++|.+|++.|+ +|+|+|+.+++||..
T Consensus 6 vVIGaGia-----GLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 6 VVLGGGIS-----GLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp EEECCBHH-----HHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred EEECCcHH-----HHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 34999999 9999999999999 999999998887633
No 309
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=95.52 E-value=0.0046 Score=55.77 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=28.8
Q ss_pred ccchhchHHHHHhhCC--CeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVG--HSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G--~~V~l~Ek~~~lGG~~ 74 (276)
+++||+||+. ++++| ++|+|+|+++.+||.+
T Consensus 13 G~~Gl~~A~~-L~~~g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 13 GITGLAAAYY-AERAFPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp BHHHHHHHHH-HHHHCTTSEEEEECSSSSSBTTC
T ss_pred CHHHHHHHHH-HHHhCCCCCEEEEECCCCCCcee
Confidence 6899999999 89999 9999999999999965
No 310
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=95.48 E-value=0.0019 Score=58.37 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=32.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcccee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGL 154 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~ 154 (276)
+.|||+|.+ |+.+|..|++.|++|+|+|+.+++||.
T Consensus 19 v~iiG~G~~-----Gl~aa~~l~~~g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 19 VAVVGGGIS-----GLAVAHHLRSRGTDAVLLESSARLGGA 54 (478)
T ss_dssp EEEECCBHH-----HHHHHHHHHTTTCCEEEECSSSSSBTT
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCCEEEEEcCCCCCce
Confidence 344999999 999999999999999999999998874
No 311
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=95.47 E-value=0.0064 Score=56.47 Aligned_cols=32 Identities=28% Similarity=0.278 Sum_probs=29.0
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
++|||+||+. |+++|++|+|+||.+.+||...
T Consensus 135 G~aGl~aA~~-la~~G~~V~vlEk~~~~gg~s~ 166 (571)
T 1y0p_A 135 GGAGFSAAIS-ATDSGAKVILIEKEPVIGGNAK 166 (571)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCTTGG
T ss_pred CHHHHHHHHH-HHHCCCcEEEEeCCCCCCCchh
Confidence 6999999999 8999999999999998887643
No 312
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.45 E-value=0.0084 Score=51.62 Aligned_cols=73 Identities=14% Similarity=0.024 Sum_probs=52.8
Q ss_pred hccCCCCCCCCCCCC-cchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccccc
Q psy12810 116 VTNHTPQSDNQTKHC-PPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 194 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~-~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~ 194 (276)
++|.|.. |++ +|..|.++|++|++.|..+.. ...+.+++.|++++.+...
T Consensus 9 ~iGiGg~-----Gms~~A~~L~~~G~~V~~~D~~~~~-------------------~~~~~L~~~gi~v~~g~~~----- 59 (326)
T 3eag_A 9 IIGIGGT-----FMGGLAAIAKEAGFEVSGCDAKMYP-------------------PMSTQLEALGIDVYEGFDA----- 59 (326)
T ss_dssp EESCCSH-----HHHHHHHHHHHTTCEEEEEESSCCT-------------------THHHHHHHTTCEEEESCCG-----
T ss_pred EEEECHH-----HHHHHHHHHHhCCCEEEEEcCCCCc-------------------HHHHHHHhCCCEEECCCCH-----
Confidence 3899999 996 789999999999999986531 1234467789999876421
Q ss_pred hhhhh-cccCEEEEcCCCCCCCCCCC
Q psy12810 195 AKELY-EEFDALLLCTGATWPRDLPI 219 (276)
Q Consensus 195 ~~~~~-~~~D~vVlAtG~~~p~~~~i 219 (276)
.... ..+|.||++.|-. +..|.+
T Consensus 60 -~~l~~~~~d~vV~Spgi~-~~~p~~ 83 (326)
T 3eag_A 60 -AQLDEFKADVYVIGNVAK-RGMDVV 83 (326)
T ss_dssp -GGGGSCCCSEEEECTTCC-TTCHHH
T ss_pred -HHcCCCCCCEEEECCCcC-CCCHHH
Confidence 1222 3589999999986 665544
No 313
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=95.43 E-value=0.002 Score=55.76 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=30.4
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVG 152 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~g 152 (276)
.+.|||+|++ |+.+|..|++.|++|+|+|+.+.++
T Consensus 6 dvvIIG~G~~-----Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (369)
T 3dme_A 6 DCIVIGAGVV-----GLAIARALAAGGHEVLVAEAAEGIG 40 (369)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CEEEECCCHH-----HHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 3445999999 9999999999999999999986543
No 314
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=95.34 E-value=0.0075 Score=52.76 Aligned_cols=29 Identities=10% Similarity=0.056 Sum_probs=26.3
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCc
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGG 72 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG 72 (276)
+|+|+++|+. |+++|++|+|+||.+.+|+
T Consensus 13 G~aGl~~A~~-La~~G~~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 13 GPGGSTAARY-AAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSTTC
T ss_pred CHHHHHHHHH-HHHCCCCEEEEeCCCCCCC
Confidence 6999999999 8999999999999876664
No 315
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=95.33 E-value=0.0028 Score=57.71 Aligned_cols=37 Identities=30% Similarity=0.396 Sum_probs=33.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
+.|||+|.+ |+.+|..|++.|++|+|+|+.+++||.+
T Consensus 16 v~iiG~G~~-----Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 16 VAVIGAGVS-----GLAAAYKLKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp EEEECCSHH-----HHHHHHHHHTTSCEEEEECSSSSSCSSC
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCcEEEEEeCCCCCCce
Confidence 445999999 9999999999999999999999998854
No 316
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.28 E-value=0.0082 Score=52.60 Aligned_cols=27 Identities=22% Similarity=0.192 Sum_probs=24.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRV 70 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~l 70 (276)
+|+|+.+|+. |+++|++|+||||.+.+
T Consensus 10 GpaGl~~A~~-L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 10 GIGGTCLAHG-LRKHGIKVTIYERNSAA 36 (412)
T ss_dssp SHHHHHHHHH-HHHTTCEEEEECSSCSS
T ss_pred CHHHHHHHHH-HHhCCCCEEEEecCCCC
Confidence 6999999999 89999999999997654
No 317
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=95.21 E-value=0.0017 Score=58.29 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=31.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCC------cEEEEEcCCCccce
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVG------HSVTVFERNDRVGG 153 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G------~~Vtvie~~~~~gg 153 (276)
+.|||+|.+ |+++|..|++.| ++|+|+|+.+++||
T Consensus 8 VvIIGaGia-----GLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 8 VVIIGGGIT-----GLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred EEEECCCHH-----HHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 344999999 999999999999 99999999988875
No 318
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=95.04 E-value=0.0027 Score=57.76 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=34.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCC-cEEEEEcCCCccceeeee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVG-HSVTVFERNDRVGGLLQY 157 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G-~~Vtvie~~~~~gg~~~~ 157 (276)
+.|||+|++ |+.+|..|++.| .+|+|+|+.+.+||.+..
T Consensus 12 v~iiG~G~~-----Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 12 IVIIGAGPT-----GLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred EEEECcCHH-----HHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 445999999 999999999998 799999999999887653
No 319
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.01 E-value=0.0093 Score=44.50 Aligned_cols=71 Identities=14% Similarity=0.037 Sum_probs=47.5
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccccch
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAA 195 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~~ 195 (276)
++|.|.. |...|..|.+.|++|+++|+++. ..+.+.+.|+.+..+-....+.-.
T Consensus 12 IiG~G~~-----G~~la~~L~~~g~~v~vid~~~~---------------------~~~~~~~~g~~~i~gd~~~~~~l~ 65 (140)
T 3fwz_A 12 LVGYGRV-----GSLLGEKLLASDIPLVVIETSRT---------------------RVDELRERGVRAVLGNAANEEIMQ 65 (140)
T ss_dssp EECCSHH-----HHHHHHHHHHTTCCEEEEESCHH---------------------HHHHHHHTTCEEEESCTTSHHHHH
T ss_pred EECcCHH-----HHHHHHHHHHCCCCEEEEECCHH---------------------HHHHHHHcCCCEEECCCCCHHHHH
Confidence 4899888 99999999999999999998653 223345578876654321110000
Q ss_pred hhhhcccCEEEEcCCCC
Q psy12810 196 KELYEEFDALLLCTGAT 212 (276)
Q Consensus 196 ~~~~~~~D~vVlAtG~~ 212 (276)
......+|.||++++..
T Consensus 66 ~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 66 LAHLECAKWLILTIPNG 82 (140)
T ss_dssp HTTGGGCSEEEECCSCH
T ss_pred hcCcccCCEEEEECCCh
Confidence 11123689999999964
No 320
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=94.99 E-value=0.0089 Score=51.85 Aligned_cols=32 Identities=19% Similarity=0.062 Sum_probs=28.0
Q ss_pred ccchhchHHHHHhhC--CCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLV--GHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~--G~~V~l~Ek~~~lGG~~~ 75 (276)
+|+|+.||+. |+++ |++|+|+|+++.+||.+.
T Consensus 88 G~AGL~aA~~-La~~~~G~~V~LiEk~~~~GGg~~ 121 (344)
T 3jsk_A 88 GSCGLSAAYV-LSTLRPDLRITIVEAGVAPGGGAW 121 (344)
T ss_dssp SHHHHHHHHH-HHHHCTTSCEEEEESSSSCCTTTT
T ss_pred cHHHHHHHHH-HHhcCCCCEEEEEeCCCccCCccc
Confidence 6999999999 7887 999999999988886543
No 321
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.98 E-value=0.0031 Score=57.32 Aligned_cols=39 Identities=26% Similarity=0.396 Sum_probs=34.4
Q ss_pred ccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 110 KDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 110 ~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
.++.| ||+|++ |+++|..|++.|++|+|+|+.+++||.+
T Consensus 34 ~~v~I--iGaG~~-----Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 34 KHVVI--VGAGMA-----GLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp CEEEE--ECCBHH-----HHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCEEE--ECCCHH-----HHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 44444 999999 9999999999999999999999998854
No 322
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.97 E-value=0.0095 Score=53.77 Aligned_cols=32 Identities=19% Similarity=0.281 Sum_probs=29.4
Q ss_pred ccchhchHHHHHhhCCC-eEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGH-SVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~-~V~l~Ek~~~lGG~~~ 75 (276)
+++|+.+|+. +++.|+ +|+|+|+++++||.+.
T Consensus 13 G~~g~~~a~~-l~~~g~~~v~~~e~~~~~gg~~~ 45 (472)
T 1b37_A 13 GMSGISAAKR-LSEAGITDLLILEATDHIGGRMH 45 (472)
T ss_dssp BHHHHHHHHH-HHHTTCCCEEEECSSSSSBTTSC
T ss_pred CHHHHHHHHH-HHhcCCCceEEEeCCCCCCCcee
Confidence 6899999999 899999 8999999999999773
No 323
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=94.95 E-value=0.011 Score=53.57 Aligned_cols=32 Identities=19% Similarity=0.097 Sum_probs=29.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQ 75 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~ 75 (276)
+.+|+.+|.. |++.|++|+++||++.+||.+.
T Consensus 29 G~~g~~~a~~-l~~~g~~v~~~e~~~~~Gg~~~ 60 (475)
T 3p1w_A 29 GLKECILSGL-LSHYGKKILVLDRNPYYGGETA 60 (475)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCGGGC
T ss_pred CHHHHHHHHH-HHHCCCcEEEEeccCCCCCCcc
Confidence 6899999999 8999999999999999999773
No 324
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=94.86 E-value=0.012 Score=52.87 Aligned_cols=29 Identities=17% Similarity=0.276 Sum_probs=26.7
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCc
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGG 72 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG 72 (276)
+|+|++||+. |+++|++|+|+||.+.+|+
T Consensus 35 G~aGl~aA~~-la~~G~~V~llEk~~~~g~ 63 (447)
T 2i0z_A 35 GPSGLMAAIG-AAEEGANVLLLDKGNKLGR 63 (447)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSSSCH
T ss_pred cHHHHHHHHH-HHHCCCCEEEEECCCCCCc
Confidence 6999999999 8999999999999887774
No 325
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=94.84 E-value=0.011 Score=54.84 Aligned_cols=31 Identities=16% Similarity=0.218 Sum_probs=28.2
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~ 74 (276)
++|||+||+. |+++|++|+|+||.+.+||..
T Consensus 130 G~aGl~aA~~-la~~G~~V~vlEk~~~~gg~s 160 (566)
T 1qo8_A 130 GSAGFNASLA-AKKAGANVILVDKAPFSGGNS 160 (566)
T ss_dssp SHHHHHHHHH-HHHHTCCEEEECSSSSSCTTG
T ss_pred CHHHHHHHHH-HHHCCCcEEEEeCCCCCCCcc
Confidence 6999999999 899999999999998888754
No 326
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=94.82 E-value=0.0037 Score=57.26 Aligned_cols=38 Identities=21% Similarity=0.236 Sum_probs=32.8
Q ss_pred cchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccce
Q psy12810 111 DIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGG 153 (276)
Q Consensus 111 ~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg 153 (276)
+..+.|||+|++ |+.+|..|++.|.+|+|+|+.+..||
T Consensus 41 ~~DVvVVGaG~A-----Gl~AA~~aa~~G~~V~vlEk~~~~GG 78 (510)
T 4at0_A 41 EADVVVAGYGIA-----GVAASIEAARAGADVLVLERTSGWGG 78 (510)
T ss_dssp EEEEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred cCCEEEECCCHH-----HHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 344556999999 99999999999999999999987653
No 327
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=94.70 E-value=0.0048 Score=58.45 Aligned_cols=38 Identities=24% Similarity=0.324 Sum_probs=33.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
.+.|||+|++ |+.+|..|++.|++|+|+|+.+.+||.+
T Consensus 109 ~v~viG~G~~-----gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 146 (662)
T 2z3y_A 109 KVIIIGSGVS-----GLAAARQLQSFGMDVTLLEARDRVGGRV 146 (662)
T ss_dssp EEEEECCBHH-----HHHHHHHHHHTTCEEEEECSSSSSBTTC
T ss_pred eEEEECcCHH-----HHHHHHHHHHCCCeEEEEecCCCCCCcc
Confidence 3445999999 9999999999999999999999988743
No 328
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=94.67 E-value=0.0047 Score=55.36 Aligned_cols=38 Identities=21% Similarity=0.189 Sum_probs=33.9
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
.+.|||+|.+ |+.+|..|++.|++|+++|+++.+||.+
T Consensus 8 ~v~iiG~G~~-----gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 8 DVIVLGTGLT-----ECILSGIMSVNGKKVLHMDRNPYYGGES 45 (433)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCTTS
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCcEEEEecCCCccccc
Confidence 3445999999 9999999999999999999999998854
No 329
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=94.56 E-value=0.0056 Score=59.55 Aligned_cols=37 Identities=24% Similarity=0.337 Sum_probs=33.2
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
+.|||+|++ |+.+|..|++.|++|+|+|+.+.+||.+
T Consensus 281 v~viG~G~a-----Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 281 VIIIGSGVS-----GLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 445999999 9999999999999999999999988743
No 330
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=94.48 E-value=0.0049 Score=55.01 Aligned_cols=35 Identities=14% Similarity=0.076 Sum_probs=30.8
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCc-EEEEEcCCCccc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGH-SVTVFERNDRVG 152 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~-~Vtvie~~~~~g 152 (276)
.+.|||+|.+ |+.+|..|++.|+ +|+|+|+.+..+
T Consensus 8 dVvIIGgG~a-----GlsaA~~La~~G~~~V~vlE~~~~~~ 43 (438)
T 3dje_A 8 SLLIVGAGTW-----GTSTALHLARRGYTNVTVLDPYPVPS 43 (438)
T ss_dssp CEEEECCSHH-----HHHHHHHHHHTTCCCEEEEESSCSSC
T ss_pred CEEEECCCHH-----HHHHHHHHHHcCCCcEEEEeCCCCCC
Confidence 3445999999 9999999999999 999999988654
No 331
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=94.46 E-value=0.02 Score=50.01 Aligned_cols=28 Identities=21% Similarity=0.202 Sum_probs=25.8
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lG 71 (276)
+|+|+++|+. |+++|++|+|+||.+.++
T Consensus 20 G~aGl~~A~~-L~~~G~~v~viE~~~~~~ 47 (379)
T 3alj_A 20 GFAGLTAAIA-LKQNGWDVRLHEKSSELR 47 (379)
T ss_dssp SHHHHHHHHH-HHHTTCEEEEECSSSSCC
T ss_pred CHHHHHHHHH-HHHCCCCEEEEecCCCCC
Confidence 6999999999 899999999999987765
No 332
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.45 E-value=0.047 Score=49.76 Aligned_cols=75 Identities=11% Similarity=0.030 Sum_probs=53.6
Q ss_pred ccchhhhccCCCCCCCCCCCC-cchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeee
Q psy12810 110 KDIAAKVTNHTPQSDNQTKHC-PPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 188 (276)
Q Consensus 110 ~~v~v~iiG~gp~~~g~~Gl~-~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~ 188 (276)
+.+.+ +|-|.+ |++ +|..|.++|++|++.|..+. ...+.+++.|+++..+..
T Consensus 23 ~~v~v--iGiG~s-----G~s~~A~~l~~~G~~V~~~D~~~~--------------------~~~~~l~~~gi~~~~g~~ 75 (494)
T 4hv4_A 23 RHIHF--VGIGGA-----GMGGIAEVLANEGYQISGSDLAPN--------------------SVTQHLTALGAQIYFHHR 75 (494)
T ss_dssp CEEEE--ETTTST-----THHHHHHHHHHTTCEEEEECSSCC--------------------HHHHHHHHTTCEEESSCC
T ss_pred CEEEE--EEEcHh-----hHHHHHHHHHhCCCeEEEEECCCC--------------------HHHHHHHHCCCEEECCCC
Confidence 34444 899999 997 69999999999999996542 123457788999887632
Q ss_pred eccccchhhhhcccCEEEEcCCCCCCCCCCC
Q psy12810 189 VGKDIAAKELYEEFDALLLCTGATWPRDLPI 219 (276)
Q Consensus 189 v~~~~~~~~~~~~~D~vVlAtG~~~p~~~~i 219 (276)
. +....+|.||++.|-. +..|.+
T Consensus 76 ~-------~~~~~~d~vV~Spgi~-~~~p~~ 98 (494)
T 4hv4_A 76 P-------ENVLDASVVVVSTAIS-ADNPEI 98 (494)
T ss_dssp G-------GGGTTCSEEEECTTSC-TTCHHH
T ss_pred H-------HHcCCCCEEEECCCCC-CCCHHH
Confidence 1 1123589999999976 655443
No 333
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=94.42 E-value=0.0049 Score=54.20 Aligned_cols=34 Identities=26% Similarity=0.252 Sum_probs=29.9
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
.+.|||+|++ |+++|..|++.|.+|+|+|+.+..
T Consensus 6 DVvIIGaG~~-----Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 6 DVVVVGGGPV-----GLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CEEEECCCHH-----HHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3445999999 999999999999999999998754
No 334
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=94.28 E-value=0.022 Score=49.54 Aligned_cols=48 Identities=17% Similarity=0.007 Sum_probs=35.2
Q ss_pred cHHHHHHHHHHHHhcCcEEEeeeeeccc--------cchhhhhcccCEEEEcCCCC
Q psy12810 165 SKEVVQRRVKLLAAEGIEFKTNINVGKD--------IAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv~i~~~~~v~~~--------~~~~~~~~~~D~vVlAtG~~ 212 (276)
+..+...+.+.+.+.|+++++++.|..- +..+..++.+|.||+|+|.+
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSGDVWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCceEEcCEEEECCChh
Confidence 4567777888888899999999876511 11112267899999999986
No 335
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=94.28 E-value=0.026 Score=49.39 Aligned_cols=27 Identities=19% Similarity=0.191 Sum_probs=24.8
Q ss_pred ccchhchHHHHHhhC--CCeEEEeccCCCC
Q psy12810 43 FTATLSYHISIQHLV--GHSVTVFERNDRV 70 (276)
Q Consensus 43 ~paGl~aA~~~aa~~--G~~V~l~Ek~~~l 70 (276)
+|+|+++|+. ++++ |++|+|+||++.+
T Consensus 9 G~aGl~~A~~-L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 9 GPAGLVFASQ-LKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp SHHHHHHHHH-HHHHCTTSEEEEECSSCTT
T ss_pred CHHHHHHHHH-HHhcCCCCCEEEEECCCCC
Confidence 6999999999 7888 9999999998766
No 336
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=94.21 E-value=0.0061 Score=52.91 Aligned_cols=33 Identities=6% Similarity=-0.030 Sum_probs=29.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
+.|||+|.+ |+++|..|++.|.+|+|+|+.+..
T Consensus 5 vvIIG~Gi~-----Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 5 LIIIGSGSV-----GAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp EEESCTTHH-----HHHHHHHHHHTTCCEEEECSSCSS
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCeEEEEecCCCC
Confidence 345999999 999999999999999999998754
No 337
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=94.14 E-value=0.023 Score=53.33 Aligned_cols=31 Identities=19% Similarity=0.152 Sum_probs=28.2
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~ 74 (276)
+|||+.||+. |+++|++|+|+||.+..||.+
T Consensus 55 G~aGl~aA~~-l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 55 GPIGCTYARE-LVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp SHHHHHHHHH-HHHTTCEEEEECSSCCCSSSS
T ss_pred cHHHHHHHHH-HHhCCCcEEEEeccCCCCCcc
Confidence 6999999999 899999999999998888744
No 338
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=94.07 E-value=0.0066 Score=54.76 Aligned_cols=35 Identities=14% Similarity=0.198 Sum_probs=31.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCC--cEEEEEcCCCccce
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVG--HSVTVFERNDRVGG 153 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G--~~Vtvie~~~~~gg 153 (276)
+.|||+|.+ |+.+|..|++.| ++|+|+|+.+.+||
T Consensus 7 v~IiGaG~~-----Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 7 LVIVGGGIT-----GLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp EEEECCBHH-----HHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred EEEECCCHH-----HHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 345999999 999999999999 99999999988876
No 339
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=94.05 E-value=0.021 Score=54.96 Aligned_cols=30 Identities=40% Similarity=0.453 Sum_probs=27.8
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCce
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGL 73 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~ 73 (276)
+++|++||+. |++.|++|+|+|+.+.+||.
T Consensus 345 G~~Gl~aA~~-l~~~g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 345 GPAGLAAARQ-LHNFGIKVTVLEAKDRIGGR 374 (776)
T ss_dssp SHHHHHHHHH-HHHHTCEEEEECSSSSSCTT
T ss_pred CHHHHHHHHH-HHHCCCcEEEEecccceece
Confidence 5899999999 89999999999999999983
No 340
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=94.04 E-value=0.026 Score=49.65 Aligned_cols=28 Identities=21% Similarity=0.215 Sum_probs=25.1
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lG 71 (276)
+|+|+++|+. |++.|++|+||||.+.++
T Consensus 35 G~aGl~~A~~-L~~~G~~v~v~E~~~~~~ 62 (398)
T 2xdo_A 35 GPVGLTMAKL-LQQNGIDVSVYERDNDRE 62 (398)
T ss_dssp SHHHHHHHHH-HHTTTCEEEEEECSSSTT
T ss_pred CHHHHHHHHH-HHHCCCCEEEEeCCCCcc
Confidence 6999999999 899999999999986543
No 341
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=94.02 E-value=0.0066 Score=53.73 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=29.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcE-EEEEcCCCcc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHS-VTVFERNDRV 151 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~-Vtvie~~~~~ 151 (276)
|.|||+||+ |+.+|..|++.|.+ |+|+|+.+.+
T Consensus 7 VvIVGaG~a-----Gl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 7 ILIAGAGIG-----GLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCCeEEEEECCCCc
Confidence 445999999 99999999999999 9999998754
No 342
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.94 E-value=0.0074 Score=52.68 Aligned_cols=34 Identities=9% Similarity=-0.027 Sum_probs=29.9
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVG 152 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~g 152 (276)
+.|||+|.+ |+.+|..|++.|++|+|+|+.+..+
T Consensus 6 vvIIGaG~~-----Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 6 VIVVGAGSM-----GMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 445999999 9999999999999999999987543
No 343
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=93.94 E-value=0.0082 Score=52.12 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=29.8
Q ss_pred ccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccc
Q psy12810 110 KDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVG 152 (276)
Q Consensus 110 ~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~g 152 (276)
+++.| ||+|.+ |+++|..|+ +|++|+|+|+.+.+|
T Consensus 10 ~dv~I--IGaGi~-----Gls~A~~La-~G~~V~vlE~~~~~g 44 (381)
T 3nyc_A 10 ADYLV--IGAGIA-----GASTGYWLS-AHGRVVVLEREAQPG 44 (381)
T ss_dssp CSEEE--ECCSHH-----HHHHHHHHT-TTSCEEEECSSSSTT
T ss_pred CCEEE--ECCcHH-----HHHHHHHHh-CCCCEEEEECCCCcc
Confidence 34444 999999 999999999 599999999987664
No 344
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=93.86 E-value=0.0084 Score=54.37 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=34.4
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
..+.|+|+|.+ |+.+|..|++.|++|+++|+++.+||..
T Consensus 21 ~dv~iiG~G~~-----g~~~a~~l~~~g~~v~~~e~~~~~Gg~~ 59 (475)
T 3p1w_A 21 YDVIILGTGLK-----ECILSGLLSHYGKKILVLDRNPYYGGET 59 (475)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCEEEECCCHH-----HHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 44556999999 9999999999999999999999998754
No 345
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=93.84 E-value=0.0072 Score=54.60 Aligned_cols=37 Identities=16% Similarity=0.244 Sum_probs=32.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCc-EEEEEcCCCccceee
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGH-SVTVFERNDRVGGLL 155 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~-~Vtvie~~~~~gg~~ 155 (276)
+.|||+|++ |+.+|..|++.|. +|+|+|+.+.+||.+
T Consensus 7 ~~iiG~G~~-----g~~~a~~l~~~g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 7 VIVVGAGMS-----GISAAKRLSEAGITDLLILEATDHIGGRM 44 (472)
T ss_dssp EEEECCBHH-----HHHHHHHHHHTTCCCEEEECSSSSSBTTS
T ss_pred EEEECCCHH-----HHHHHHHHHhcCCCceEEEeCCCCCCCce
Confidence 345999999 9999999999998 899999999888743
No 346
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.82 E-value=0.023 Score=50.70 Aligned_cols=25 Identities=24% Similarity=0.133 Sum_probs=23.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERND 68 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~ 68 (276)
+|+|+++|+. |+++|++|+|+||.+
T Consensus 31 GpaGl~~A~~-La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 31 GTAGLHLGLF-LRQHDVDVTVYTDRK 55 (430)
T ss_dssp HHHHHHHHHH-HHHTTCEEEEEESCC
T ss_pred cHHHHHHHHH-HHHCCCeEEEEcCCC
Confidence 6999999999 899999999999975
No 347
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=93.75 E-value=0.026 Score=52.55 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=27.2
Q ss_pred ccchhchHHHHHhhC------CCeEEEeccCCCCCce
Q psy12810 43 FTATLSYHISIQHLV------GHSVTVFERNDRVGGL 73 (276)
Q Consensus 43 ~paGl~aA~~~aa~~------G~~V~l~Ek~~~lGG~ 73 (276)
+|||++||+. |++. |++|+|+||.+.+|+.
T Consensus 44 G~aGlaaA~~-La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 44 GPAGLSAATR-LKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp SHHHHHHHHH-HHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred CHHHHHHHHH-HHhcccccCCCCcEEEEeCCCCCCCc
Confidence 6999999999 8888 9999999998888764
No 348
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.67 E-value=0.035 Score=48.99 Aligned_cols=25 Identities=16% Similarity=0.061 Sum_probs=23.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERND 68 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~ 68 (276)
+|+|+++|+. |+++|++|+|+||++
T Consensus 14 G~aGl~~A~~-La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 14 GPAGTVAASL-VNKSGFKVKIVEKQK 38 (421)
T ss_dssp SHHHHHHHHH-HHTTTCCEEEECSSC
T ss_pred CHHHHHHHHH-HHhCCCCEEEEeCCC
Confidence 6999999999 899999999999976
No 349
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=93.66 E-value=0.024 Score=53.98 Aligned_cols=27 Identities=7% Similarity=0.070 Sum_probs=25.4
Q ss_pred ccchhchHHHHHhhCC--------CeEEEeccCC-CC
Q psy12810 43 FTATLSYHISIQHLVG--------HSVTVFERND-RV 70 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G--------~~V~l~Ek~~-~l 70 (276)
+++||+||+. ++++| ++|+|||+++ ++
T Consensus 65 GiaGL~aA~~-L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 65 GAGGIAALYE-LGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp SHHHHHHHHH-HHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CHHHHHHHHH-HHHcCcccccCCCceEEEEeccCccc
Confidence 6899999999 89999 9999999998 89
No 350
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.58 E-value=0.01 Score=51.50 Aligned_cols=32 Identities=22% Similarity=0.171 Sum_probs=28.5
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
.+.|||+|.+ |+++|..|++.|.+|+|+|+..
T Consensus 8 dVvVIG~Gi~-----Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 8 RVVVLGSGVI-----GLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEECCCHH-----HHHHHHHHHhCCCEEEEEeccC
Confidence 3445999999 9999999999999999999865
No 351
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.55 E-value=0.01 Score=51.66 Aligned_cols=32 Identities=19% Similarity=0.009 Sum_probs=28.7
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
.+.|||+|.+ |+.+|..|++.|.+|+|+|+..
T Consensus 7 dVvIIGgGi~-----Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 7 EIVVIGGGIV-----GVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECCCHH-----HHHHHHHHHHCCCeEEEEeCCC
Confidence 3445999999 9999999999999999999985
No 352
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=93.46 E-value=0.037 Score=48.55 Aligned_cols=27 Identities=22% Similarity=0.092 Sum_probs=24.8
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRV 70 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~l 70 (276)
+|+|+++|+. |+++|++|+|+||.+.+
T Consensus 15 G~aGl~~A~~-L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 15 GIGGAMLAYL-LGRQGHRVVVVEQARRE 41 (399)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSCCC
T ss_pred CHHHHHHHHH-HHhCCCcEEEEeCCCCC
Confidence 6999999999 89999999999997654
No 353
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=93.45 E-value=0.037 Score=48.82 Aligned_cols=28 Identities=25% Similarity=0.324 Sum_probs=25.6
Q ss_pred ccchhchHHHHHhhCCCe-EEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVGHS-VTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~-V~l~Ek~~~lG 71 (276)
+|+|+++|+. |+++|++ |+|+||.+.++
T Consensus 13 G~aGl~~A~~-L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 13 GIGGLSCALA-LHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp SHHHHHHHHH-HHHTTCSEEEEEESSSSCC
T ss_pred CHHHHHHHHH-HHhCCCCeEEEEECCCCcc
Confidence 6999999999 8999999 99999987665
No 354
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.41 E-value=0.029 Score=41.54 Aligned_cols=69 Identities=16% Similarity=0.212 Sum_probs=44.2
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccccch
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAA 195 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~~ 195 (276)
++|+|.. |...|..|.+.|++|+++|+.+. ..+.+.+.++.+..+-....+ .-
T Consensus 11 I~G~G~i-----G~~la~~L~~~g~~V~~id~~~~---------------------~~~~~~~~~~~~~~gd~~~~~-~l 63 (141)
T 3llv_A 11 VIGSEAA-----GVGLVRELTAAGKKVLAVDKSKE---------------------KIELLEDEGFDAVIADPTDES-FY 63 (141)
T ss_dssp EECCSHH-----HHHHHHHHHHTTCCEEEEESCHH---------------------HHHHHHHTTCEEEECCTTCHH-HH
T ss_pred EECCCHH-----HHHHHHHHHHCCCeEEEEECCHH---------------------HHHHHHHCCCcEEECCCCCHH-HH
Confidence 4898887 99999999999999999997542 123344557665543211100 00
Q ss_pred hhh-hcccCEEEEcCCC
Q psy12810 196 KEL-YEEFDALLLCTGA 211 (276)
Q Consensus 196 ~~~-~~~~D~vVlAtG~ 211 (276)
... .-.+|.||+++|.
T Consensus 64 ~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 64 RSLDLEGVSAVLITGSD 80 (141)
T ss_dssp HHSCCTTCSEEEECCSC
T ss_pred HhCCcccCCEEEEecCC
Confidence 011 1258999999984
No 355
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=93.39 E-value=0.036 Score=51.32 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=27.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~ 74 (276)
+++|+.+|+. |+++|++|+|+||++..+|+.
T Consensus 27 Gi~Gl~~A~~-La~~G~~V~LlEk~d~~~GtS 57 (561)
T 3da1_A 27 GITGAGIALD-AQVRGIQTGLVEMNDFASGTS 57 (561)
T ss_dssp SHHHHHHHHH-HHTTTCCEEEEESSSTTCSGG
T ss_pred CHHHHHHHHH-HHhCCCcEEEEECCCCCCCcc
Confidence 6999999999 899999999999997666654
No 356
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=93.39 E-value=0.01 Score=54.77 Aligned_cols=34 Identities=15% Similarity=0.042 Sum_probs=30.1
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
.|.|||+||+ |+.+|..|++.|.+|+|||+.+..
T Consensus 28 dVlIVGaGpa-----Gl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 28 DVLILGGGPV-----GMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCCEEEEeCCCCC
Confidence 4445999999 999999999999999999988754
No 357
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=93.33 E-value=0.013 Score=55.45 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=30.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVG 152 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~g 152 (276)
.|.|||+|.+ |+.+|..|++.|.+|+|+|+.+.+|
T Consensus 274 DVvIIGgGia-----GlsaA~~La~~G~~V~vlEk~~~~g 308 (676)
T 3ps9_A 274 EAAIIGGGIA-----SALLSLALLRRGWQVTLYCADEAPA 308 (676)
T ss_dssp EEEEECCSHH-----HHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CEEEECCCHH-----HHHHHHHHHHCCCeEEEEeCCCccc
Confidence 3456999999 9999999999999999999976554
No 358
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=93.26 E-value=0.013 Score=55.60 Aligned_cols=35 Identities=11% Similarity=0.101 Sum_probs=30.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVG 152 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~g 152 (276)
.|.|||+|.+ |+.+|..|++.|++|+|+|+.+.+|
T Consensus 266 DVvIIGgGia-----GlsaA~~La~~G~~V~vlEk~~~~g 300 (689)
T 3pvc_A 266 DIAIIGGGIV-----SALTALALQRRGAVVTLYCADAQPA 300 (689)
T ss_dssp SEEEECCSHH-----HHHHHHHHHTTTCCEEEEESSSSTT
T ss_pred CEEEECCcHH-----HHHHHHHHHHCCCcEEEEeCCCccc
Confidence 4456999999 9999999999999999999976553
No 359
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=93.16 E-value=0.04 Score=48.39 Aligned_cols=27 Identities=22% Similarity=0.258 Sum_probs=24.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRV 70 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~l 70 (276)
+|+|+++|+. |+++|++|+||||.+..
T Consensus 14 G~aGl~~A~~-L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 14 SISGLTAALM-LRDAGVDVDVYERSPQP 40 (397)
T ss_dssp SHHHHHHHHH-HHHTTCEEEEECSSSSS
T ss_pred CHHHHHHHHH-HHhCCCCEEEEecCCCC
Confidence 6999999999 89999999999997653
No 360
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.10 E-value=0.049 Score=48.21 Aligned_cols=25 Identities=20% Similarity=0.058 Sum_probs=23.4
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERND 68 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~ 68 (276)
++||++||+. ++++|++|+|+|+++
T Consensus 10 G~AG~~AA~~-la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 10 GLAGSEAAWT-LLRLGVPVRLFEMRP 34 (443)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECCTT
T ss_pred hHHHHHHHHH-HHHCCCcEEEEeccC
Confidence 6899999999 899999999999875
No 361
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=93.10 E-value=0.045 Score=49.52 Aligned_cols=30 Identities=27% Similarity=0.256 Sum_probs=26.3
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~ 74 (276)
++||++||+. |+++|++|+|+||. ..||..
T Consensus 8 G~AGl~aA~~-la~~G~~V~viek~-~~~g~s 37 (472)
T 2e5v_A 8 GIAGLSAGVA-LRRAGKKVTLISKR-IDGGST 37 (472)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSS-TTCSSG
T ss_pred CHHHHHHHHH-HHHCCCCEEEEeCC-CCCchH
Confidence 6899999999 89999999999998 566643
No 362
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=93.10 E-value=0.035 Score=48.57 Aligned_cols=26 Identities=19% Similarity=0.126 Sum_probs=23.9
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDR 69 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~ 69 (276)
+|+|+++|+. |++.|++|+|+||.+.
T Consensus 11 G~aGl~~A~~-L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 11 GPSGLLLGQL-LHKAGIDNVILERQTP 36 (394)
T ss_dssp SHHHHHHHHH-HHHHTCCEEEECSSCH
T ss_pred CHHHHHHHHH-HHHCCCCEEEEeCCCC
Confidence 6999999999 8999999999999763
No 363
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=93.08 E-value=0.011 Score=51.87 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=30.4
Q ss_pred cchhhhccCCCCCCCCCCCCcchhhhh-CC-cEEEEEcCCCc
Q psy12810 111 DIAAKVTNHTPQSDNQTKHCPPLIVNI-VG-HSVTVFERNDR 150 (276)
Q Consensus 111 ~v~v~iiG~gp~~~g~~Gl~~A~~l~~-~G-~~Vtvie~~~~ 150 (276)
+..+.|||+|++ |+++|..|++ .| ++|+|+|+.+.
T Consensus 21 ~~dVvIIG~G~~-----Gl~~A~~La~~~G~~~V~vlE~~~~ 57 (405)
T 2gag_B 21 SYDAIIVGGGGH-----GLATAYFLAKNHGITNVAVLEKGWL 57 (405)
T ss_dssp EEEEEEECCSHH-----HHHHHHHHHHHHCCCCEEEECSSST
T ss_pred cCCEEEECcCHH-----HHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 344556999999 9999999999 99 99999999873
No 364
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=93.05 E-value=0.038 Score=49.56 Aligned_cols=26 Identities=12% Similarity=-0.074 Sum_probs=24.2
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDR 69 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~ 69 (276)
+|||+++|+. |+++|++|+|+||.+.
T Consensus 15 G~aGl~aA~~-La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 15 GFAGSSAAYQ-LSRRGLKILLVDSKPW 40 (453)
T ss_dssp SHHHHHHHHH-HSSSSCCEEEECSSCG
T ss_pred CHHHHHHHHH-HHHCCCCEEEEECCCC
Confidence 7999999999 8999999999999764
No 365
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=92.97 E-value=0.051 Score=49.61 Aligned_cols=25 Identities=20% Similarity=0.189 Sum_probs=23.7
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERND 68 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~ 68 (276)
+|+|+.+|+. |+++|++|+|+||.+
T Consensus 16 G~aGl~aA~~-La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 16 GPGGSTLASF-VAMRGHRVLLLEREA 40 (512)
T ss_dssp SHHHHHHHHH-HHTTTCCEEEECSSC
T ss_pred CHHHHHHHHH-HHhCCCCEEEEccCC
Confidence 6999999999 899999999999986
No 366
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=92.92 E-value=0.048 Score=49.75 Aligned_cols=28 Identities=25% Similarity=0.108 Sum_probs=24.8
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lG 71 (276)
+|+|+++|+. |+++|++|+|+||.+.++
T Consensus 20 GpaGl~~A~~-La~~G~~v~vlE~~~~~~ 47 (500)
T 2qa1_A 20 GPAGMMLAGE-LRLAGVEVVVLERLVERT 47 (500)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESCCC-C
T ss_pred CHHHHHHHHH-HHHCCCCEEEEeCCCCCC
Confidence 6999999999 899999999999976554
No 367
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.90 E-value=0.023 Score=50.99 Aligned_cols=73 Identities=12% Similarity=-0.011 Sum_probs=51.5
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccccch
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAA 195 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~~ 195 (276)
++|.|++ |+++|..|.++|++|+++|..+..- .. ..+. .|+++..+... .
T Consensus 10 viG~G~~-----G~~~a~~l~~~G~~v~~~D~~~~~~-----------~~--------~~l~-~G~~~~~g~~~-----~ 59 (439)
T 2x5o_A 10 IIGLGLT-----GLSCVDFFLARGVTPRVMDTRMTPP-----------GL--------DKLP-EAVERHTGSLN-----D 59 (439)
T ss_dssp EECCHHH-----HHHHHHHHHTTTCCCEEEESSSSCT-----------TG--------GGSC-TTSCEEESSCC-----H
T ss_pred EEeecHH-----HHHHHHHHHhCCCEEEEEECCCCcc-----------hh--------HHhh-CCCEEEECCCc-----H
Confidence 3999999 9999999999999999999866421 01 2245 68888766521 1
Q ss_pred hhhhcccCEEEEcCCCCCCCCCCCC
Q psy12810 196 KELYEEFDALLLCTGATWPRDLPIP 220 (276)
Q Consensus 196 ~~~~~~~D~vVlAtG~~~p~~~~i~ 220 (276)
+... .+|.||++.|-. |..|.+.
T Consensus 60 ~~~~-~~d~vV~s~gi~-~~~p~~~ 82 (439)
T 2x5o_A 60 EWLM-AADLIVASPGIA-LAHPSLS 82 (439)
T ss_dssp HHHH-TCSEEEECTTSC-TTCHHHH
T ss_pred HHhc-cCCEEEeCCCCC-CCCHHHH
Confidence 1122 689999999976 6555443
No 368
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=92.86 E-value=0.053 Score=50.03 Aligned_cols=28 Identities=11% Similarity=-0.040 Sum_probs=25.8
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lG 71 (276)
+|+|+++|+. |+++|++|+|+||.+.++
T Consensus 35 GpaGl~~A~~-La~~G~~V~vlEr~~~~~ 62 (549)
T 2r0c_A 35 GPVGMALALD-LAHRQVGHLVVEQTDGTI 62 (549)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSCSCC
T ss_pred CHHHHHHHHH-HHHCCCCEEEEeCCCCCC
Confidence 7999999999 899999999999987665
No 369
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=92.85 E-value=0.05 Score=49.58 Aligned_cols=28 Identities=25% Similarity=0.080 Sum_probs=25.2
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lG 71 (276)
+|+|+++|+. |+++|++|+|+||.+.++
T Consensus 21 GpaGl~~A~~-La~~G~~v~vlE~~~~~~ 48 (499)
T 2qa2_A 21 GPAGLMLAGE-LRLGGVDVMVLEQLPQRT 48 (499)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESCSSCC
T ss_pred CHHHHHHHHH-HHHCCCCEEEEECCCCCC
Confidence 6999999999 899999999999976553
No 370
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=92.83 E-value=0.051 Score=49.83 Aligned_cols=28 Identities=25% Similarity=0.111 Sum_probs=25.4
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lG 71 (276)
+|+|+++|+. |+++|++|+|+||.+.++
T Consensus 14 G~aGl~~A~~-La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 14 GLGGLSTAMF-LARQGVRVLVVERRPGLS 41 (535)
T ss_dssp SHHHHHHHHH-HHTTTCCEEEECSSSSCC
T ss_pred CHHHHHHHHH-HHHCCCCEEEEeCCCCCC
Confidence 6999999999 899999999999987554
No 371
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=92.81 E-value=0.016 Score=54.36 Aligned_cols=38 Identities=16% Similarity=0.131 Sum_probs=32.7
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceee
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLL 155 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~ 155 (276)
.+.|||+|++ |+.+|..|++.|++|+|+|+.+..+|..
T Consensus 48 dvvIIG~G~a-----Gl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 48 DVVIVGSGPI-----GCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred CEEEECCcHH-----HHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 3445999999 9999999999999999999998776533
No 372
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=92.69 E-value=0.041 Score=51.31 Aligned_cols=28 Identities=7% Similarity=0.013 Sum_probs=25.4
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lG 71 (276)
++|||.||+. |++.|++|+|+||.+..|
T Consensus 16 G~AGl~AA~~-la~~G~~V~vlEK~~~~~ 43 (588)
T 2wdq_A 16 GGAGMRAALQ-ISQSGQTCALLSKVFPTR 43 (588)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESSCGGG
T ss_pred CHHHHHHHHH-HHHCCCcEEEEecCCCCC
Confidence 6999999999 899999999999987654
No 373
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=92.56 E-value=0.057 Score=49.74 Aligned_cols=30 Identities=23% Similarity=0.165 Sum_probs=24.9
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCcee
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLL 74 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~ 74 (276)
++|||.||+. |++ |++|+|+||.+..||..
T Consensus 17 G~AGl~aAl~-la~-G~~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 17 GAAGLSLALR-LAD-QHQVIVLSKGPVTEGST 46 (540)
T ss_dssp SHHHHHHHHH-HTT-TSCEEEECSSCTTC---
T ss_pred cHHHHHHHHH-Hhc-CCcEEEEECCCCCCCCh
Confidence 6999999999 899 99999999988776643
No 374
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=92.30 E-value=0.019 Score=53.33 Aligned_cols=35 Identities=14% Similarity=0.202 Sum_probs=31.2
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccce
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGG 153 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg 153 (276)
+.|||+|++ |+.+|..|++.|++|+|+|+.+.++|
T Consensus 129 v~viG~G~a-----G~~aa~~~~~~g~~v~~~e~~~~~~~ 163 (572)
T 1d4d_A 129 VVIIGSGGA-----GLAAAVSARDAGAKVILLEKEPIPGG 163 (572)
T ss_dssp EEEECCSHH-----HHHHHHHHHSSSCCEEEECSSSSSCT
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCcEEEEecCCCCCc
Confidence 344999999 99999999999999999999987754
No 375
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=92.29 E-value=0.02 Score=55.21 Aligned_cols=36 Identities=28% Similarity=0.437 Sum_probs=32.1
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccce
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGG 153 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg 153 (276)
.+.|||+|++ |+.+|..|++.|++|+|+|+.+.+||
T Consensus 338 ~v~viG~G~~-----Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 338 SVIIIGAGPA-----GLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred eEEEECCCHH-----HHHHHHHHHHCCCcEEEEecccceec
Confidence 3445999999 99999999999999999999888776
No 376
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=92.27 E-value=0.021 Score=53.84 Aligned_cols=35 Identities=6% Similarity=0.058 Sum_probs=30.3
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhh-CCcEEEEEcCCCcc
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNI-VGHSVTVFERNDRV 151 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~-~G~~Vtvie~~~~~ 151 (276)
..|.|||+||+ |+.+|..|++ .|.+|+|||+.+..
T Consensus 33 ~dVlIVGaGpa-----GL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 33 VDVLIVGCGPA-----GLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp EEEEEECCSHH-----HHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CcEEEECcCHH-----HHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 34555999999 9999999999 99999999987643
No 377
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=92.18 E-value=0.07 Score=48.58 Aligned_cols=49 Identities=16% Similarity=0.178 Sum_probs=35.4
Q ss_pred CcHHHHHHHHHHHHhcCcEEEeeeeecc---c-----c------chhhhhcccCEEEEcCCCC
Q psy12810 164 LSKEVVQRRVKLLAAEGIEFKTNINVGK---D-----I------AAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 164 ~~~~~~~~~~~~l~~~gv~i~~~~~v~~---~-----~------~~~~~~~~~D~vVlAtG~~ 212 (276)
.+..+...+.+.+.+.|+++++++.|+. + + +++..++.+|.||+|+|.+
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~ 209 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPW 209 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGG
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChh
Confidence 3456777788888889999999887651 0 1 1112367899999999987
No 378
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=92.06 E-value=0.075 Score=49.32 Aligned_cols=28 Identities=14% Similarity=-0.107 Sum_probs=25.0
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lG 71 (276)
+|+|+++|+. |+++|++|+|+||.+..+
T Consensus 58 G~aGL~~A~~-La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 58 GPVGLMLAGE-LRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEBSCSSCC
T ss_pred CHHHHHHHHH-HHHCCCCEEEEcCCCCCC
Confidence 6999999999 899999999999976543
No 379
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.03 E-value=0.059 Score=39.44 Aligned_cols=31 Identities=6% Similarity=0.068 Sum_probs=26.3
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
+.++|+|.. |...|..|.+.|++|+++++.+
T Consensus 7 i~IiG~G~i-----G~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 7 IIIAGIGRV-----GYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCeEEEEECCH
Confidence 344898888 9999999999999999998754
No 380
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=92.01 E-value=0.023 Score=52.26 Aligned_cols=31 Identities=6% Similarity=-0.004 Sum_probs=27.9
Q ss_pred hhhccCCCCCCCCCCCCcchhhhh---CCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNI---VGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~---~G~~Vtvie~~~ 149 (276)
|.|||+|++ |+.+|..|++ .|.+|+|||+.+
T Consensus 8 VvIVGgG~a-----Gl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 8 IVIVGGGTA-----GWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred EEEECCCHH-----HHHHHHHHHhhcCCCCEEEEECCCC
Confidence 445999999 9999999999 999999999855
No 381
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=91.92 E-value=0.014 Score=52.17 Aligned_cols=30 Identities=13% Similarity=0.045 Sum_probs=27.4
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCC-cEEEEEcC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVG-HSVTVFER 147 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G-~~Vtvie~ 147 (276)
.+.|||+|.+ |+.+|..|++.| .+|+|+|+
T Consensus 25 dVvIIGgGia-----Gls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 25 DYVVVGAGVV-----GLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHHHCSCEEEEES
T ss_pred CEEEECcCHH-----HHHHHHHHHhCCCCcEEEEcc
Confidence 4445999999 999999999999 99999999
No 382
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=91.91 E-value=0.023 Score=50.24 Aligned_cols=29 Identities=17% Similarity=0.130 Sum_probs=27.4
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
|||+|++ |+++|..+++.|++|+|+|+.+
T Consensus 6 VIGgG~A-----G~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 6 VVGAGLA-----GSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp EECCSHH-----HHHHHHHHHHTTCCEEEECCTT
T ss_pred EECchHH-----HHHHHHHHHHCCCcEEEEeccC
Confidence 4999999 9999999999999999999876
No 383
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.87 E-value=0.04 Score=44.24 Aligned_cols=30 Identities=3% Similarity=-0.051 Sum_probs=26.2
Q ss_pred hhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
.++|+|.. |...|..|.+.|++|+++|+.+
T Consensus 4 iIiG~G~~-----G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 4 IIIGGETT-----AYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp EEECCHHH-----HHHHHHHHHHTTCCEEEEESCH
T ss_pred EEECCCHH-----HHHHHHHHHhCCCeEEEEECCH
Confidence 34888887 9999999999999999999765
No 384
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=91.86 E-value=0.084 Score=49.20 Aligned_cols=27 Identities=30% Similarity=0.359 Sum_probs=24.3
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRV 70 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~l 70 (276)
+|||+++|+. |+++|++|+|+|+.+..
T Consensus 32 G~AGl~aA~~-Lar~G~~V~LiEr~~~~ 58 (591)
T 3i3l_A 32 GPAGSVAGLT-LHKLGHDVTIYERSAFP 58 (591)
T ss_dssp SHHHHHHHHH-HHHTTCEEEEECSSCSS
T ss_pred CHHHHHHHHH-HHcCCCCEEEEcCCCCC
Confidence 6999999999 89999999999998543
No 385
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=91.50 E-value=0.029 Score=52.12 Aligned_cols=32 Identities=9% Similarity=-0.025 Sum_probs=28.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
+.|||+|.. |+.+|..|++.|.+|+|+|+.+.
T Consensus 35 VvVIGgGi~-----G~~~A~~La~rG~~V~LlE~~~~ 66 (571)
T 2rgh_A 35 LLIIGGGIT-----GAGVAVQAAASGIKTGLIEMQDF 66 (571)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEECSSST
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCcEEEEeCCCC
Confidence 344999999 99999999999999999998763
No 386
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=91.45 E-value=0.027 Score=51.93 Aligned_cols=34 Identities=12% Similarity=0.071 Sum_probs=29.7
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVG 152 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~g 152 (276)
.+.|||+|++ |+.+|..|++ |.+|+|+|+.+..+
T Consensus 10 DVvVVG~G~A-----Gl~aAl~la~-G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 10 DVLIIGSGAA-----GLSLALRLAD-QHQVIVLSKGPVTE 43 (540)
T ss_dssp SEEEECCSHH-----HHHHHHHHTT-TSCEEEECSSCTTC
T ss_pred CEEEECccHH-----HHHHHHHHhc-CCcEEEEECCCCCC
Confidence 4445999999 9999999999 99999999987654
No 387
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=91.25 E-value=0.092 Score=46.26 Aligned_cols=48 Identities=8% Similarity=0.111 Sum_probs=34.3
Q ss_pred cHHHHHHHHHHHHhcCcEEEeeeeec---------cc-c-------chhhhhcccCEEEEcCCCC
Q psy12810 165 SKEVVQRRVKLLAAEGIEFKTNINVG---------KD-I-------AAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~gv~i~~~~~v~---------~~-~-------~~~~~~~~~D~vVlAtG~~ 212 (276)
+..+...+.+.+.+.|+++++++.|+ .- . ......+.+|.||+|+|.+
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETRQIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCcEEECCEEEECCCcc
Confidence 45677778888888899999987665 21 1 1111257899999999986
No 388
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=91.21 E-value=0.025 Score=51.92 Aligned_cols=31 Identities=10% Similarity=0.069 Sum_probs=27.8
Q ss_pred hhhccCCCCCCCCCCCCcchhhhh------------CCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNI------------VGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~------------~G~~Vtvie~~~ 149 (276)
|.|||+|++ |+.+|..|++ .|.+|+|||+.+
T Consensus 10 VvIVGgG~a-----Gl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 10 IIIVGGGTA-----GWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp EEEECCHHH-----HHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred EEEECCCHH-----HHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 445999999 9999999999 999999999865
No 389
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=90.91 E-value=0.025 Score=48.68 Aligned_cols=32 Identities=9% Similarity=-0.042 Sum_probs=28.3
Q ss_pred hhccCCCCCCCCCCCCcchhhhhCC------cEEEEEcCCCcc
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIVG------HSVTVFERNDRV 151 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~G------~~Vtvie~~~~~ 151 (276)
.|||+|.+ |+++|..|++.| .+|+|+|+....
T Consensus 4 vIIGgGi~-----Gls~A~~La~~G~~~~p~~~V~vlE~~~~~ 41 (351)
T 3g3e_A 4 VVIGAGVI-----GLSTALCIHERYHSVLQPLDIKVYADRFTP 41 (351)
T ss_dssp EEECCSHH-----HHHHHHHHHHHHTTTSSSCEEEEEESSCGG
T ss_pred EEECCCHH-----HHHHHHHHHHhccccCCCceEEEEECCCCC
Confidence 34999999 999999999998 899999998643
No 390
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=90.87 E-value=0.035 Score=51.71 Aligned_cols=34 Identities=12% Similarity=0.082 Sum_probs=30.0
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
.+.|||+|++ |+.+|..|++.|.+|+|+|+.+..
T Consensus 9 DVvVVGaG~A-----Gl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 9 DAVVIGAGGA-----GMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEEESSCGG
T ss_pred CEEEECcCHH-----HHHHHHHHHHCCCcEEEEecCCCC
Confidence 3445999999 999999999999999999998754
No 391
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=90.85 E-value=0.095 Score=49.11 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=24.9
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCC-CCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERND-RVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~-~lG 71 (276)
+|||++||+. |++.|.+|+|+|++. .+|
T Consensus 36 G~AGl~AAla-lAr~G~kVlLIEk~~~~iG 64 (637)
T 2zxi_A 36 GHAGIEAALA-AARMGAKTAMFVLNADTIG 64 (637)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESCGGGTT
T ss_pred CHHHHHHHHH-HHHCCCCEEEEEecccccC
Confidence 7999999999 899999999999973 455
No 392
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=90.85 E-value=0.12 Score=48.04 Aligned_cols=30 Identities=13% Similarity=0.069 Sum_probs=26.0
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCce
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGL 73 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~ 73 (276)
+.+|+++|+. |+++|++|+|+||.+..+|+
T Consensus 41 Gi~G~~~A~~-La~rG~~V~LlE~~~~~~Gt 70 (571)
T 2rgh_A 41 GITGAGVAVQ-AAASGIKTGLIEMQDFAEGT 70 (571)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSSTTCSG
T ss_pred CHHHHHHHHH-HHHCCCcEEEEeCCCCCCCc
Confidence 6899999999 89999999999998755553
No 393
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=90.79 E-value=0.16 Score=41.17 Aligned_cols=72 Identities=11% Similarity=0.017 Sum_probs=47.7
Q ss_pred CccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeee
Q psy12810 109 GKDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 188 (276)
Q Consensus 109 ~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~ 188 (276)
++.+.+ +|+|.. |...+..|.+.|.+|+|+++... + .+.+...+.++++....
T Consensus 31 gk~VLV--VGgG~v-----a~~ka~~Ll~~GA~VtVvap~~~---------------~----~l~~l~~~~~i~~i~~~- 83 (223)
T 3dfz_A 31 GRSVLV--VGGGTI-----ATRRIKGFLQEGAAITVVAPTVS---------------A----EINEWEAKGQLRVKRKK- 83 (223)
T ss_dssp TCCEEE--ECCSHH-----HHHHHHHHGGGCCCEEEECSSCC---------------H----HHHHHHHTTSCEEECSC-
T ss_pred CCEEEE--ECCCHH-----HHHHHHHHHHCCCEEEEECCCCC---------------H----HHHHHHHcCCcEEEECC-
Confidence 455555 999998 99999999999999999986432 1 12222334457665432
Q ss_pred eccccchhhhhcccCEEEEcCCCC
Q psy12810 189 VGKDIAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 189 v~~~~~~~~~~~~~D~vVlAtG~~ 212 (276)
... .....+|.||.|||..
T Consensus 84 ----~~~-~dL~~adLVIaAT~d~ 102 (223)
T 3dfz_A 84 ----VGE-EDLLNVFFIVVATNDQ 102 (223)
T ss_dssp ----CCG-GGSSSCSEEEECCCCT
T ss_pred ----CCH-hHhCCCCEEEECCCCH
Confidence 111 1123589999999975
No 394
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=90.78 E-value=0.097 Score=49.13 Aligned_cols=29 Identities=10% Similarity=-0.068 Sum_probs=25.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCC-CCCc
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERND-RVGG 72 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~-~lGG 72 (276)
++||++||+. |+++|++|+|+|++. .+|+
T Consensus 30 G~AGl~AAla-LAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 30 GHAGCEAALA-VARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESCGGGTTC
T ss_pred cHHHHHHHHH-HHHCCCcEEEEEecccccCC
Confidence 6999999999 899999999999974 4554
No 395
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=90.68 E-value=0.12 Score=48.57 Aligned_cols=28 Identities=11% Similarity=-0.026 Sum_probs=25.2
Q ss_pred ccchhchHHHHHhh-CCCeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHL-VGHSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~-~G~~V~l~Ek~~~lG 71 (276)
+|+||++|+. |++ .|++|+|+||.+.++
T Consensus 41 GpaGL~~A~~-La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 41 GPAGLTLAAQ-LAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp SHHHHHHHHH-HTTCTTSCEEEECSSSSCC
T ss_pred CHHHHHHHHH-HHHhCCCCEEEEeCCCCCC
Confidence 6999999999 899 999999999987554
No 396
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=90.67 E-value=0.037 Score=52.29 Aligned_cols=34 Identities=12% Similarity=-0.067 Sum_probs=29.8
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
.|.|||+|.+ |+.+|..|++.|.+|+|+|+.+..
T Consensus 7 DVvVIGgG~A-----GL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 7 DSLVIGGGLA-----GLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp SEEEECCSHH-----HHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cEEEECchHH-----HHHHHHHHHHCCCcEEEEeccCCC
Confidence 3445999999 999999999999999999998754
No 397
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.57 E-value=0.043 Score=41.46 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=27.2
Q ss_pred hhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
.++|+|.. |..+|..|.+.|++|+++++.+.
T Consensus 23 ~IiG~G~i-----G~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 23 VIFGCGRL-----GSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp EEECCSHH-----HHHHHHHHHHTTCEEEEEESCGG
T ss_pred EEECCCHH-----HHHHHHHHHhCCCeEEEEECCHH
Confidence 34899988 99999999999999999998764
No 398
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=90.48 E-value=0.043 Score=50.63 Aligned_cols=31 Identities=6% Similarity=0.031 Sum_probs=27.9
Q ss_pred hhhccCCCCCCCCCCCCcchhhhh---CCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNI---VGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~---~G~~Vtvie~~~ 149 (276)
|.|||+|++ |+.+|..|++ .|.+|+|||+.+
T Consensus 28 VvIVGgG~a-----Gl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 28 ILIVGGGTA-----GWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred EEEECCCHH-----HHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 445999999 9999999999 999999999864
No 399
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=90.47 E-value=0.035 Score=52.52 Aligned_cols=33 Identities=6% Similarity=0.144 Sum_probs=29.1
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhh-----CCcEEEEEcCCCc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNI-----VGHSVTVFERNDR 150 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~-----~G~~Vtvie~~~~ 150 (276)
.|.|||+||+ |+.+|..|++ .|.+|+|||+.+.
T Consensus 10 dVlIVGaGpa-----GL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 10 DVLIVGAGPA-----GLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred cEEEECcCHH-----HHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 3445999999 9999999999 9999999998753
No 400
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=90.46 E-value=0.11 Score=48.96 Aligned_cols=28 Identities=14% Similarity=0.156 Sum_probs=24.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCC-CCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERND-RVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~-~lG 71 (276)
+|||++||+. |++.|++|+|+|++. .+|
T Consensus 37 G~AGl~AAla-LAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 37 GHAGTEAAMA-AARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESCGGGTT
T ss_pred hHHHHHHHHH-HHhCCCCEEEEeecccccc
Confidence 7999999999 899999999999973 344
No 401
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.31 E-value=0.073 Score=41.29 Aligned_cols=71 Identities=10% Similarity=-0.016 Sum_probs=45.4
Q ss_pred hhccCCCCCCCCCCCCcchhhhhC-CcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecccc
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIV-GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI 193 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~-G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~ 193 (276)
.++|.|.. |..+|..|.+. |++|+++|+++. ..+.+.+.|+.+..+.....+
T Consensus 43 ~IiG~G~~-----G~~~a~~L~~~~g~~V~vid~~~~---------------------~~~~~~~~g~~~~~gd~~~~~- 95 (183)
T 3c85_A 43 LILGMGRI-----GTGAYDELRARYGKISLGIEIREE---------------------AAQQHRSEGRNVISGDATDPD- 95 (183)
T ss_dssp EEECCSHH-----HHHHHHHHHHHHCSCEEEEESCHH---------------------HHHHHHHTTCCEEECCTTCHH-
T ss_pred EEECCCHH-----HHHHHHHHHhccCCeEEEEECCHH---------------------HHHHHHHCCCCEEEcCCCCHH-
Confidence 34899988 99999999999 999999997652 122345567765543211000
Q ss_pred chhhh--hcccCEEEEcCCCC
Q psy12810 194 AAKEL--YEEFDALLLCTGAT 212 (276)
Q Consensus 194 ~~~~~--~~~~D~vVlAtG~~ 212 (276)
.-... .-.+|.||++++..
T Consensus 96 ~l~~~~~~~~ad~vi~~~~~~ 116 (183)
T 3c85_A 96 FWERILDTGHVKLVLLAMPHH 116 (183)
T ss_dssp HHHTBCSCCCCCEEEECCSSH
T ss_pred HHHhccCCCCCCEEEEeCCCh
Confidence 00111 22589999999853
No 402
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.15 E-value=0.092 Score=47.37 Aligned_cols=34 Identities=3% Similarity=-0.010 Sum_probs=29.0
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
|.+.|+|+|.. |...|..|...|++|+++|+.+.
T Consensus 4 M~iiI~G~G~v-----G~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQV-----GGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHH-----HHHHHHHTCSTTEEEEEEESCHH
T ss_pred CEEEEECCCHH-----HHHHHHHHHHCCCCEEEEECCHH
Confidence 34555899998 99999999999999999998763
No 403
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.85 E-value=0.077 Score=47.17 Aligned_cols=72 Identities=8% Similarity=0.069 Sum_probs=47.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeecccc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI 193 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~ 193 (276)
+.|+|.|.. |...|..|.+.|++|+++|.++. ..+.+.+.|+.++.+-....+.
T Consensus 7 viIiG~Gr~-----G~~va~~L~~~g~~vvvId~d~~---------------------~v~~~~~~g~~vi~GDat~~~~ 60 (413)
T 3l9w_A 7 VIIAGFGRF-----GQITGRLLLSSGVKMVVLDHDPD---------------------HIETLRKFGMKVFYGDATRMDL 60 (413)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEEECCHH---------------------HHHHHHHTTCCCEESCTTCHHH
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCCEEEEECCHH---------------------HHHHHHhCCCeEEEcCCCCHHH
Confidence 334899888 99999999999999999997663 2233456677666653221111
Q ss_pred chhhhhcccCEEEEcCCC
Q psy12810 194 AAKELYEEFDALLLCTGA 211 (276)
Q Consensus 194 ~~~~~~~~~D~vVlAtG~ 211 (276)
-..-..-.+|.||++++.
T Consensus 61 L~~agi~~A~~viv~~~~ 78 (413)
T 3l9w_A 61 LESAGAAKAEVLINAIDD 78 (413)
T ss_dssp HHHTTTTTCSEEEECCSS
T ss_pred HHhcCCCccCEEEECCCC
Confidence 011112358899999885
No 404
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=89.82 E-value=0.049 Score=51.09 Aligned_cols=34 Identities=9% Similarity=-0.039 Sum_probs=29.8
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
.|.|||+|++ |+.+|..|++.|.+|+|+|+.+..
T Consensus 20 DVvVVG~G~A-----Gl~AAl~aa~~G~~V~vlEK~~~~ 53 (621)
T 2h88_A 20 DAVVVGAGGA-----GLRAAFGLSEAGFNTACVTKLFPT 53 (621)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEEESSCGG
T ss_pred CEEEECccHH-----HHHHHHHHHHCCCcEEEEeccCCC
Confidence 4445999999 999999999999999999997643
No 405
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.79 E-value=0.25 Score=44.29 Aligned_cols=47 Identities=17% Similarity=0.054 Sum_probs=34.6
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCCceeeecCCCCCCCHHHHHHHHHHHHhCCCeEEeccc
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 107 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~ 107 (276)
+++||++|+. ++++||+|+++|+++. ..+ ...+.+++.|+++.++..
T Consensus 18 G~sG~s~A~~-l~~~G~~V~~~D~~~~------------~~~-----~~~~~L~~~gi~~~~g~~ 64 (451)
T 3lk7_A 18 ARSGEAAARL-LAKLGAIVTVNDGKPF------------DEN-----PTAQSLLEEGIKVVCGSH 64 (451)
T ss_dssp TTTHHHHHHH-HHHTTCEEEEEESSCG------------GGC-----HHHHHHHHTTCEEEESCC
T ss_pred CHHHHHHHHH-HHhCCCEEEEEeCCcc------------cCC-----hHHHHHHhCCCEEEECCC
Confidence 6899999999 8999999999999651 001 123456677888877653
No 406
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=89.76 E-value=0.033 Score=50.75 Aligned_cols=30 Identities=10% Similarity=0.047 Sum_probs=26.3
Q ss_pred hhccCCCCCCCCCCCCcchhhhh---CCcEEEEEcCCC
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNI---VGHSVTVFERND 149 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~---~G~~Vtvie~~~ 149 (276)
.|||+|++ |+.+|..|++ .|.+|+|||+.+
T Consensus 6 vIVGgG~a-----Gl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 6 VIVGGGTA-----GWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp EEECCHHH-----HHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred EEECCCHH-----HHHHHHHHHhhcCCCCEEEEEecCC
Confidence 34999999 9999999999 999999999865
No 407
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=89.73 E-value=0.3 Score=44.74 Aligned_cols=73 Identities=15% Similarity=0.088 Sum_probs=51.4
Q ss_pred hccCCCCCCCCCCCC-cchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccccc
Q psy12810 116 VTNHTPQSDNQTKHC-PPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 194 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~-~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~ 194 (276)
++|-|.. |++ +|..|.++|++|++.|..... ...+.|++.|+++..+...
T Consensus 24 ~iGiGg~-----Gms~lA~~l~~~G~~V~~sD~~~~~-------------------~~~~~L~~~gi~~~~G~~~----- 74 (524)
T 3hn7_A 24 ILGICGT-----FMGSLALLARALGHTVTGSDANIYP-------------------PMSTQLEQAGVTIEEGYLI----- 74 (524)
T ss_dssp EETTTSH-----HHHHHHHHHHHTTCEEEEEESCCCT-------------------THHHHHHHTTCEEEESCCG-----
T ss_pred EEEecHh-----hHHHHHHHHHhCCCEEEEECCCCCc-------------------HHHHHHHHCCCEEECCCCH-----
Confidence 3899888 997 488899999999999976521 1234567789998876421
Q ss_pred hhhhhcccCEEEEcCCCCCCCCCCC
Q psy12810 195 AKELYEEFDALLLCTGATWPRDLPI 219 (276)
Q Consensus 195 ~~~~~~~~D~vVlAtG~~~p~~~~i 219 (276)
......+|.||+..|-. +..|.+
T Consensus 75 -~~~~~~~d~vV~Spgi~-~~~p~l 97 (524)
T 3hn7_A 75 -AHLQPAPDLVVVGNAMK-RGMDVI 97 (524)
T ss_dssp -GGGCSCCSEEEECTTCC-TTSHHH
T ss_pred -HHcCCCCCEEEECCCcC-CCCHHH
Confidence 11223589999999976 555543
No 408
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.58 E-value=0.16 Score=38.08 Aligned_cols=75 Identities=15% Similarity=0.129 Sum_probs=44.8
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccccch
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAA 195 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~~ 195 (276)
++|+|.. |...+..|.+.|++|+++++.+. +..+.. +.....|+.++.+-....+.-.
T Consensus 8 I~G~G~v-----G~~la~~L~~~g~~V~vid~~~~----------------~~~~~~-~~~~~~~~~~i~gd~~~~~~l~ 65 (153)
T 1id1_A 8 VCGHSIL-----AINTILQLNQRGQNVTVISNLPE----------------DDIKQL-EQRLGDNADVIPGDSNDSSVLK 65 (153)
T ss_dssp EECCSHH-----HHHHHHHHHHTTCCEEEEECCCH----------------HHHHHH-HHHHCTTCEEEESCTTSHHHHH
T ss_pred EECCCHH-----HHHHHHHHHHCCCCEEEEECCCh----------------HHHHHH-HHhhcCCCeEEEcCCCCHHHHH
Confidence 4898888 99999999999999999998641 000011 1122346776654321110001
Q ss_pred hhhhcccCEEEEcCCCC
Q psy12810 196 KELYEEFDALLLCTGAT 212 (276)
Q Consensus 196 ~~~~~~~D~vVlAtG~~ 212 (276)
....-.+|.||++++..
T Consensus 66 ~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 66 KAGIDRCRAILALSDND 82 (153)
T ss_dssp HHTTTTCSEEEECSSCH
T ss_pred HcChhhCCEEEEecCCh
Confidence 11123689999999863
No 409
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.52 E-value=0.22 Score=36.88 Aligned_cols=34 Identities=21% Similarity=0.036 Sum_probs=27.5
Q ss_pred CccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 109 GKDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 109 ~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
++.+.+ +|+|.. |...+..|...|.+|+++++.+
T Consensus 21 ~~~v~i--iG~G~i-----G~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILL--VGNGML-----ASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEE--ECCSHH-----HHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEE--ECCCHH-----HHHHHHHHHhCCCEEEEEcCCH
Confidence 344445 899888 9999999999999999998754
No 410
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=89.11 E-value=0.055 Score=52.50 Aligned_cols=33 Identities=9% Similarity=-0.015 Sum_probs=29.2
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCc-EEEEEcCCCc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGH-SVTVFERNDR 150 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~-~Vtvie~~~~ 150 (276)
.+.|||+|.+ |+++|..|++.|. +|+|+|+.+.
T Consensus 6 dVvIIGgGi~-----Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 6 RIVIIGAGIV-----GTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CEEEECCSHH-----HHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CEEEECcCHH-----HHHHHHHHHhCCCCcEEEEeCCCC
Confidence 3445999999 9999999999998 9999999875
No 411
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=88.61 E-value=0.23 Score=45.47 Aligned_cols=25 Identities=16% Similarity=-0.093 Sum_probs=23.1
Q ss_pred ccchhchHHHHHhh---CCCeEEEeccCC
Q psy12810 43 FTATLSYHISIQHL---VGHSVTVFERND 68 (276)
Q Consensus 43 ~paGl~aA~~~aa~---~G~~V~l~Ek~~ 68 (276)
+|+|+++|+. |++ +|++|+|+|+.+
T Consensus 14 G~aGl~aA~~-La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 14 GTAGWMAASY-LVRALQQQANITLIESAA 41 (538)
T ss_dssp SHHHHHHHHH-HHHHCCSSCEEEEEECSS
T ss_pred CHHHHHHHHH-HHhhcCCCCEEEEECCCC
Confidence 6999999999 889 999999999965
No 412
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=88.60 E-value=0.14 Score=47.76 Aligned_cols=28 Identities=11% Similarity=0.029 Sum_probs=24.8
Q ss_pred ccchhchHHHHHhhCC--CeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVG--HSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G--~~V~l~Ek~~~lG 71 (276)
++||++||+. |++.| ++|+|+||.+..+
T Consensus 14 G~AGl~aAl~-la~~G~~~~V~vlEk~~~~~ 43 (602)
T 1kf6_A 14 GGAGLRAAIA-AAQANPNAKIALISKVYPMR 43 (602)
T ss_dssp SHHHHHHHHH-HHHHCTTCCEEEEESSCGGG
T ss_pred CHHHHHHHHH-HHhcCCCCcEEEEeCCCCCC
Confidence 6999999999 89999 9999999976543
No 413
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=88.57 E-value=0.049 Score=51.85 Aligned_cols=33 Identities=6% Similarity=0.083 Sum_probs=30.3
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCC--------cEEEEEcCCC-cc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVG--------HSVTVFERND-RV 151 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G--------~~Vtvie~~~-~~ 151 (276)
+.|||+|++ |+.+|..|++.| ++|+|+|+.+ ++
T Consensus 59 v~IiGaGia-----GL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 59 IAIVGGGAG-----GIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEECCSHH-----HHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred EEEECCCHH-----HHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 445999999 999999999988 9999999999 88
No 414
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=88.14 E-value=0.22 Score=45.45 Aligned_cols=46 Identities=15% Similarity=0.086 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHh-cCcEEEeeeeec-cc---------cc-hhhhhcccCEEEEcCCCC
Q psy12810 166 KEVVQRRVKLLAA-EGIEFKTNINVG-KD---------IA-AKELYEEFDALLLCTGAT 212 (276)
Q Consensus 166 ~~~~~~~~~~l~~-~gv~i~~~~~v~-~~---------~~-~~~~~~~~D~vVlAtG~~ 212 (276)
..+...+.+.+.+ .|++++.++ |+ .. +. .+..++.+|.||.|+|.+
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~~-v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRDH-VSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAK 232 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEECC-EEEEEECTTSCEEEEEESSSCEEECSEEEECSGGG
T ss_pred HHHHHHHHHHHHhcCCCEEEEeE-EEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcc
Confidence 4455667777777 899999984 43 11 00 111247899999999986
No 415
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=87.75 E-value=0.17 Score=45.95 Aligned_cols=25 Identities=20% Similarity=-0.049 Sum_probs=21.8
Q ss_pred ccchhchHHHHHhh---CCCeEEEeccCC
Q psy12810 43 FTATLSYHISIQHL---VGHSVTVFERND 68 (276)
Q Consensus 43 ~paGl~aA~~~aa~---~G~~V~l~Ek~~ 68 (276)
+|+|+.+|+. |++ +|++|+|+|+.+
T Consensus 11 G~aGl~~A~~-La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 11 GTAGWMTASY-LKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp HHHHHHHHHH-HHHHHGGGSEEEEEEC--
T ss_pred CHHHHHHHHH-HHhhcCCCCEEEEEecCC
Confidence 5899999999 889 999999999975
No 416
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=87.57 E-value=0.29 Score=46.07 Aligned_cols=26 Identities=15% Similarity=-0.024 Sum_probs=23.4
Q ss_pred ccchhchHHHHHh---h-CCCeEEEeccCCC
Q psy12810 43 FTATLSYHISIQH---L-VGHSVTVFERNDR 69 (276)
Q Consensus 43 ~paGl~aA~~~aa---~-~G~~V~l~Ek~~~ 69 (276)
++|||.||+. |+ + +|.+|+|+||.+.
T Consensus 31 G~AGl~AAl~-aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 31 GFSGCGAAYE-AAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp SHHHHHHHHH-HHHHHTTTTCCEEEECSSCT
T ss_pred CHHHHHHHHH-HhhhhhhCCCeEEEEeCcCC
Confidence 6999999999 88 5 8999999999864
No 417
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=87.43 E-value=0.26 Score=45.33 Aligned_cols=46 Identities=15% Similarity=0.185 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhc-CcEEEeeeeec-ccc--c--------hhhhhcccCEEEEcCCCC
Q psy12810 166 KEVVQRRVKLLAAE-GIEFKTNINVG-KDI--A--------AKELYEEFDALLLCTGAT 212 (276)
Q Consensus 166 ~~~~~~~~~~l~~~-gv~i~~~~~v~-~~~--~--------~~~~~~~~D~vVlAtG~~ 212 (276)
..+...+.+.+.+. |++++++ .|+ ... + .+..++.+|.||.|+|.+
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFR 251 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCc
Confidence 45667777888888 9999998 553 110 0 112257899999999976
No 418
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=87.32 E-value=0.12 Score=47.54 Aligned_cols=34 Identities=12% Similarity=-0.031 Sum_probs=29.4
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
+.+.|||+|++ |+.+|..|++ |.+|.|+|+++..
T Consensus 27 yD~IIVGsG~A-----G~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 27 YDYVIVGGGTS-----GCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEECCSTT-----HHHHHHHHTT-TSCEEEECSSBCG
T ss_pred ccEEEECccHH-----HHHHHHHHhc-CCcEEEEecCCCc
Confidence 44456999999 9999999999 9999999998653
No 419
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=87.17 E-value=0.085 Score=48.52 Aligned_cols=32 Identities=16% Similarity=0.164 Sum_probs=28.8
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
.+.|||+|++ |+.+|..|++.|.+|+|+|+++
T Consensus 9 D~iIvG~G~a-----G~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 9 DYIIVGAGPG-----GIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSC
T ss_pred eEEEECcCHH-----HHHHHHHHHhCCCeEEEEeCCC
Confidence 3445999999 9999999999999999999876
No 420
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=86.96 E-value=0.088 Score=48.01 Aligned_cols=35 Identities=6% Similarity=0.006 Sum_probs=29.7
Q ss_pred cchhhhccCCCCCCCCCCCCcchhhhh-CCcEEEEEcCCCc
Q psy12810 111 DIAAKVTNHTPQSDNQTKHCPPLIVNI-VGHSVTVFERNDR 150 (276)
Q Consensus 111 ~v~v~iiG~gp~~~g~~Gl~~A~~l~~-~G~~Vtvie~~~~ 150 (276)
++.+.|||+|++ |+.+|..|++ .|++|.|+|+++.
T Consensus 17 ~yD~IIVGsG~a-----G~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSA-----GSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHH-----HHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHH-----HHHHHHHHHhCCCCeEEEEcCCCC
Confidence 445556999999 9999999997 6789999998864
No 421
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=86.94 E-value=0.32 Score=45.95 Aligned_cols=27 Identities=11% Similarity=-0.048 Sum_probs=24.2
Q ss_pred ccchhchHHHHHhh-----CCCeEEEeccCCCC
Q psy12810 43 FTATLSYHISIQHL-----VGHSVTVFERNDRV 70 (276)
Q Consensus 43 ~paGl~aA~~~aa~-----~G~~V~l~Ek~~~l 70 (276)
+|+||.+|+. |++ .|++|+|+||.+..
T Consensus 17 GpaGL~lA~~-La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 17 GPAGLMAARV-LSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp SHHHHHHHHH-HHHHHHHSTTCCEEEECSSSSC
T ss_pred CHHHHHHHHH-HhccccccCCCCEEEEeCCCCC
Confidence 7999999999 899 99999999997543
No 422
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=85.78 E-value=0.35 Score=45.62 Aligned_cols=26 Identities=0% Similarity=-0.114 Sum_probs=23.4
Q ss_pred ccchhchHHHHHhhC------CCeEEEeccCCC
Q psy12810 43 FTATLSYHISIQHLV------GHSVTVFERNDR 69 (276)
Q Consensus 43 ~paGl~aA~~~aa~~------G~~V~l~Ek~~~ 69 (276)
++|||.||+. |+++ |.+|+|+||...
T Consensus 31 G~AGL~AAl~-aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 31 GMGNCGAAFE-AVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp SHHHHHHHHH-HHHHHHHHCTTCCEEEECSSCT
T ss_pred CHHHHHHHHH-HHhhccccCCCCcEEEEEecCC
Confidence 6999999999 8887 999999999753
No 423
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=85.31 E-value=0.2 Score=36.58 Aligned_cols=29 Identities=17% Similarity=0.108 Sum_probs=25.3
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
++|+|.. |...+..|.+.|++|+++++.+
T Consensus 11 I~G~G~i-----G~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 11 VIGLGRF-----GGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp EECCSHH-----HHHHHHHHHHTTCCCEEEESCH
T ss_pred EECCCHH-----HHHHHHHHHHCCCEEEEEeCCH
Confidence 4898877 9999999999999999998754
No 424
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=84.96 E-value=0.89 Score=38.78 Aligned_cols=45 Identities=16% Similarity=0.131 Sum_probs=33.1
Q ss_pred ccchhc-hHHHHHhhCCCeEEEeccCCCCCceeeecCCCCCCCHHHHHHHHHHHHhCCCeEEeccc
Q psy12810 43 FTATLS-YHISIQHLVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 107 (276)
Q Consensus 43 ~paGl~-aA~~~aa~~G~~V~l~Ek~~~lGG~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~ 107 (276)
...||+ +|.. ++++|++|+++|+++. + + ..+.+++.|+++..+..
T Consensus 13 Gg~Gms~~A~~-L~~~G~~V~~~D~~~~---------~----~------~~~~L~~~gi~v~~g~~ 58 (326)
T 3eag_A 13 GGTFMGGLAAI-AKEAGFEVSGCDAKMY---------P----P------MSTQLEALGIDVYEGFD 58 (326)
T ss_dssp CSHHHHHHHHH-HHHTTCEEEEEESSCC---------T----T------HHHHHHHTTCEEEESCC
T ss_pred CHHHHHHHHHH-HHhCCCEEEEEcCCCC---------c----H------HHHHHHhCCCEEECCCC
Confidence 588997 6777 8999999999999752 0 1 23456777898887643
No 425
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=84.78 E-value=0.14 Score=48.16 Aligned_cols=33 Identities=12% Similarity=-0.020 Sum_probs=28.7
Q ss_pred hhhhccCCCCCCCCCCCCcchhhh---h-CCcEEEEEcCCCc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVN---I-VGHSVTVFERNDR 150 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~---~-~G~~Vtvie~~~~ 150 (276)
.+.|||+|++ |+.+|..++ + .|.+|+|+|+.+.
T Consensus 24 DVvVIG~G~A-----Gl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 24 DILIIGGGFS-----GCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred CEEEECcCHH-----HHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 3445999999 999999999 6 8999999999773
No 426
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=83.96 E-value=0.47 Score=40.13 Aligned_cols=72 Identities=17% Similarity=0.205 Sum_probs=44.9
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeee--ecc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN--VGK 191 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~--v~~ 191 (276)
+.++|+|.. |...|..|+ .|++|+++++.+. ..+.+++.|+.+..... +..
T Consensus 5 I~IiGaGa~-----G~~~a~~L~-~g~~V~~~~r~~~---------------------~~~~l~~~G~~~~~~~~~~~~~ 57 (307)
T 3ego_A 5 IGIIGGGSV-----GLLCAYYLS-LYHDVTVVTRRQE---------------------QAAAIQSEGIRLYKGGEEFRAD 57 (307)
T ss_dssp EEEECCSHH-----HHHHHHHHH-TTSEEEEECSCHH---------------------HHHHHHHHCEEEEETTEEEEEC
T ss_pred EEEECCCHH-----HHHHHHHHh-cCCceEEEECCHH---------------------HHHHHHhCCceEecCCCeeccc
Confidence 345899988 999999999 9999999987652 12334556766652110 000
Q ss_pred ccchhhhhcccCEEEEcCCCC
Q psy12810 192 DIAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 192 ~~~~~~~~~~~D~vVlAtG~~ 212 (276)
.....+..-.+|.||+|+=+.
T Consensus 58 ~~~~~~~~~~~D~vilavK~~ 78 (307)
T 3ego_A 58 CSADTSINSDFDLLVVTVKQH 78 (307)
T ss_dssp CEEESSCCSCCSEEEECCCGG
T ss_pred ccccccccCCCCEEEEEeCHH
Confidence 000111223689999999764
No 427
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=83.68 E-value=0.17 Score=47.47 Aligned_cols=41 Identities=15% Similarity=0.110 Sum_probs=35.7
Q ss_pred cchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeee
Q psy12810 111 DIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQ 156 (276)
Q Consensus 111 ~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~ 156 (276)
.+.+.|+|+|.. |...|..|++.|++|.++|++++.||.|.
T Consensus 8 ~~D~~i~GtGl~-----~~~~a~~~~~~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 8 DFDVIVIGTGLP-----ESIIAAACSRSGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp BCSEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred cCCEEEECCcHH-----HHHHHHHHHhCCCEEEEEcCCCcccCccc
Confidence 344555999998 99999999999999999999999998774
No 428
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=83.65 E-value=0.62 Score=32.54 Aligned_cols=29 Identities=17% Similarity=0.092 Sum_probs=24.9
Q ss_pred hccCCCCCCCCCCCCcchhhhhCC-cEEEEEcCCC
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVG-HSVTVFERND 149 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G-~~Vtvie~~~ 149 (276)
++|+|.. |..++..|.+.| ++|+++++.+
T Consensus 10 I~G~G~i-----G~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 10 VVGAGKI-----GQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EECCSHH-----HHHHHHHHHHCSSEEEEEEESCH
T ss_pred EECCCHH-----HHHHHHHHHhCCCceEEEEeCCH
Confidence 4888777 999999999999 9999998754
No 429
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=83.56 E-value=0.76 Score=39.01 Aligned_cols=31 Identities=23% Similarity=0.250 Sum_probs=26.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
+.++|+|.. |...|..|++.|++|+++++.+
T Consensus 5 I~IiGaGai-----G~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 5 ILVIGTGAI-----GSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEESCCHH-----HHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEECcCHH-----HHHHHHHHHhCCCeEEEEeCCh
Confidence 334899998 9999999999999999998754
No 430
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=82.97 E-value=0.15 Score=48.14 Aligned_cols=32 Identities=0% Similarity=-0.095 Sum_probs=28.1
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhC------CcEEEEEcCCC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIV------GHSVTVFERND 149 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~------G~~Vtvie~~~ 149 (276)
.|.|||+|++ |+.+|..|++. |.+|+|+|+.+
T Consensus 24 DVvVVG~G~A-----GL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 24 DLLMVGGGMG-----NCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp SEEEECCSHH-----HHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred CEEEECCCHH-----HHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 3445999999 99999999987 99999999865
No 431
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=82.74 E-value=0.9 Score=40.49 Aligned_cols=36 Identities=11% Similarity=0.086 Sum_probs=30.0
Q ss_pred CccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 109 GKDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 109 ~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
+.++++ +|.|.. |+.+|..|++.|++|+++|..+..
T Consensus 11 ~~~~~V--iGlGyv-----Glp~A~~La~~G~~V~~~D~~~~k 46 (431)
T 3ojo_A 11 GSKLTV--VGLGYI-----GLPTSIMFAKHGVDVLGVDINQQT 46 (431)
T ss_dssp -CEEEE--ECCSTT-----HHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CCccEE--EeeCHH-----HHHHHHHHHHCCCEEEEEECCHHH
Confidence 345555 888888 999999999999999999988753
No 432
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=82.49 E-value=0.2 Score=46.56 Aligned_cols=35 Identities=6% Similarity=-0.114 Sum_probs=30.1
Q ss_pred cchhhhccCCCCCCCCCCCCcchhhhhCC-cEEEEEcCCCc
Q psy12810 111 DIAAKVTNHTPQSDNQTKHCPPLIVNIVG-HSVTVFERNDR 150 (276)
Q Consensus 111 ~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G-~~Vtvie~~~~ 150 (276)
.+.++|+|+|.+ |+.+|..|++.| .+|.|+|+++.
T Consensus 6 ~yDyIVVGgG~A-----G~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTA-----GNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHH-----HHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHH-----HHHHHHHHHhCCCCcEEEEecCCC
Confidence 344556999999 999999999988 69999999876
No 433
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=82.24 E-value=1.4 Score=37.24 Aligned_cols=31 Identities=13% Similarity=0.123 Sum_probs=26.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
+.++|+|.. |...|..|++.|++|+++++.+
T Consensus 5 I~IiGaGai-----G~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 5 IAIVGAGAL-----GLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp EEEECCSTT-----HHHHHHHHHHTSCCEEEECSTT
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCeEEEEEcCc
Confidence 344899998 9999999999999999998753
No 434
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=81.69 E-value=1 Score=40.48 Aligned_cols=33 Identities=12% Similarity=0.032 Sum_probs=28.1
Q ss_pred CccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCC
Q psy12810 109 GKDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERN 148 (276)
Q Consensus 109 ~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~ 148 (276)
++.+.| +|+|.. |...+..|.+.|.+|+|+++.
T Consensus 12 ~~~vlV--vGgG~v-----a~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLI--VGGGDV-----AERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEE--ECCSHH-----HHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEE--ECCCHH-----HHHHHHHHHhCcCEEEEEcCC
Confidence 345555 999999 999999999999999999974
No 435
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=80.67 E-value=0.24 Score=45.06 Aligned_cols=34 Identities=15% Similarity=0.050 Sum_probs=29.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
.+.|||+|++ |+.+|..|++.|.+|.|+|++...
T Consensus 7 d~~iiG~G~~-----g~~~a~~l~~~~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 7 PAVVIGTGYG-----AAVSALRLGEAGVQTLMLEMGQLW 40 (504)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCCEEEEESSCCC
T ss_pred CEEEECCCHH-----HHHHHHHHHhCCCcEEEEeCCCCC
Confidence 3445999999 999999999999999999988743
No 436
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=80.50 E-value=0.94 Score=37.88 Aligned_cols=31 Identities=10% Similarity=0.141 Sum_probs=26.5
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
+.++|+|.. |...|..|++.|++|+++++.+
T Consensus 6 i~iiG~G~~-----G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 6 IAIAGAGAM-----GSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECcCHH-----HHHHHHHHHhCCCcEEEEECCH
Confidence 345899888 9999999999999999998754
No 437
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=80.37 E-value=0.42 Score=38.50 Aligned_cols=29 Identities=3% Similarity=-0.157 Sum_probs=25.2
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
++|+|.. |...|..|.+.|+ |+++|+.+.
T Consensus 14 I~G~G~~-----G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 14 ICGWSES-----TLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp EESCCHH-----HHHHHHHSTTSEE-EEEESCGGG
T ss_pred EECCChH-----HHHHHHHHHhCCe-EEEEECCHH
Confidence 4899888 9999999999999 999997653
No 438
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=80.04 E-value=0.67 Score=41.32 Aligned_cols=26 Identities=15% Similarity=-0.111 Sum_probs=23.1
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDR 69 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~ 69 (276)
.++||++|+. |+++||+|+++|.+..
T Consensus 14 G~~G~~~a~~-l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 14 GLTGLSCVDF-FLARGVTPRVMDTRMT 39 (439)
T ss_dssp HHHHHHHHHH-HHTTTCCCEEEESSSS
T ss_pred cHHHHHHHHH-HHhCCCEEEEEECCCC
Confidence 6999999998 8999999999998643
No 439
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=79.37 E-value=0.46 Score=43.95 Aligned_cols=33 Identities=15% Similarity=-0.049 Sum_probs=28.5
Q ss_pred hhhccCCCCCCCCCCCCcchhhhh-CCcEEEEEcCCCcc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNI-VGHSVTVFERNDRV 151 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~-~G~~Vtvie~~~~~ 151 (276)
+.|+|+|.+ |+.+|..|++ .+.+|.|+|+++..
T Consensus 5 ~IIVG~G~a-----G~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 5 YVVVGAGNA-----GNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp EEESCCSTT-----HHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred EEEECCcHH-----HHHHHHHHHhCcCCcEEEEecCCcc
Confidence 345999999 9999999998 79999999987643
No 440
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=78.42 E-value=0.33 Score=44.20 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=29.5
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
+.+.|||+|++ |+.+|..|++.|.+|.|+|++..
T Consensus 12 ~d~~iiG~G~~-----g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 12 VPALVIGSGYG-----GAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCEEEECCCHH-----HHHHHHHHHHCCCcEEEEECCCC
Confidence 34456999999 99999999999999999998763
No 441
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=78.04 E-value=0.34 Score=45.03 Aligned_cols=34 Identities=12% Similarity=0.004 Sum_probs=29.2
Q ss_pred cchhhhccCCCCCCCCCCCCcchhhhh-CCcEEEEEcCCC
Q psy12810 111 DIAAKVTNHTPQSDNQTKHCPPLIVNI-VGHSVTVFERND 149 (276)
Q Consensus 111 ~v~v~iiG~gp~~~g~~Gl~~A~~l~~-~G~~Vtvie~~~ 149 (276)
.+.++|||+|.+ |+.+|..|++ .+.+|.|+|+++
T Consensus 19 ~yDyIIVGgG~A-----G~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 19 TVDYIIAGGGLT-----GLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp EEEEEEECCSHH-----HHHHHHHHTTSTTCCEEEECSSC
T ss_pred CccEEEECCcHH-----HHHHHHHHHhCCCCcEEEEecCC
Confidence 345556999999 9999999997 589999999987
No 442
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=77.59 E-value=1.1 Score=41.04 Aligned_cols=26 Identities=15% Similarity=0.065 Sum_probs=23.8
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDR 69 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~ 69 (276)
+|||+.+|.+ |++.|++|+|+|+.+.
T Consensus 16 G~aG~~~A~~-L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 16 GPGGIIAADR-LSEAGKKVLLLERGGP 41 (546)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSCC
T ss_pred CHHHHHHHHH-HHhCCCeEEEEeCCCC
Confidence 6999999999 8999999999999763
No 443
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=76.52 E-value=2.3 Score=36.06 Aligned_cols=32 Identities=9% Similarity=0.007 Sum_probs=27.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
.|.+||.|.. |...|..|++.|++|+++++.+
T Consensus 33 ~I~iIG~G~m-----G~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 33 KITFLGTGSM-----GLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp EEEEECCTTT-----HHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECccHH-----HHHHHHHHHhCCCeEEEEcCCH
Confidence 3445999998 9999999999999999998765
No 444
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=76.50 E-value=1.8 Score=37.01 Aligned_cols=33 Identities=3% Similarity=-0.023 Sum_probs=27.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCc-EEEEEcCCCc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGH-SVTVFERNDR 150 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~-~Vtvie~~~~ 150 (276)
.+.++|+|.. |...|..|+..|+ +|+++|..+.
T Consensus 11 kI~VIGaG~v-----G~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 11 KVAMIGSGMI-----GGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHHTCCEEEEECSSSS
T ss_pred EEEEECCCHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 3445999888 9999999999998 9999998664
No 445
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=76.26 E-value=1.7 Score=36.85 Aligned_cols=30 Identities=10% Similarity=0.076 Sum_probs=25.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
+.++|+|.. |...|..|++.|++|+++ +.+
T Consensus 22 I~IiGaGa~-----G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 22 VAIMGAGAV-----GCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp EEEESCSHH-----HHHHHHHHHHTTCEEEEE-CCH
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCeEEEE-EcH
Confidence 345999998 999999999999999999 543
No 446
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=75.66 E-value=2.3 Score=35.50 Aligned_cols=31 Identities=10% Similarity=-0.068 Sum_probs=26.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
+.+||.|.. |...|..|.+.|++|+++++.+
T Consensus 6 I~iiG~G~m-----G~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 6 IAFIGLGHM-----GAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEECCSTT-----HHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEeecHH-----HHHHHHHHHhCCCeEEEEcCCH
Confidence 334899888 9999999999999999998765
No 447
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=75.33 E-value=2.6 Score=38.02 Aligned_cols=32 Identities=16% Similarity=0.062 Sum_probs=28.5
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhC-Cc-EEEEEcCCCc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIV-GH-SVTVFERNDR 150 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~-G~-~Vtvie~~~~ 150 (276)
|.++|.|.. |+..|..|++. |+ +|+++|+.+.
T Consensus 21 IaVIGlG~m-----G~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 21 IGVLGMGYV-----GIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEECCSTT-----HHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEECcCHH-----HHHHHHHHHHhCCCCeEEEEECChh
Confidence 445999998 99999999999 99 9999998876
No 448
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=75.00 E-value=4.5 Score=36.50 Aligned_cols=65 Identities=6% Similarity=0.012 Sum_probs=46.9
Q ss_pred hccCCCCCCCCCCCC-cchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccccc
Q psy12810 116 VTNHTPQSDNQTKHC-PPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 194 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~-~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~ 194 (276)
++|-|.+ |++ +|..|.+.|++|++.|.... ...+.+.+.|+++..+...
T Consensus 24 viGiG~s-----G~s~~A~~l~~~G~~V~~~D~~~~--------------------~~~~~l~~~gi~~~~g~~~----- 73 (491)
T 2f00_A 24 FVGIGGA-----GMGGIAEVLANEGYQISGSDLAPN--------------------PVTQQLMNLGATIYFNHRP----- 73 (491)
T ss_dssp EETTTST-----THHHHHHHHHHTTCEEEEECSSCC--------------------HHHHHHHHTTCEEESSCCG-----
T ss_pred EEEcCHH-----HHHHHHHHHHhCCCeEEEECCCCC--------------------HHHHHHHHCCCEEECCCCH-----
Confidence 4899998 998 89999999999999987542 1123467789988766421
Q ss_pred hhhhhcccCEEEEcCCCC
Q psy12810 195 AKELYEEFDALLLCTGAT 212 (276)
Q Consensus 195 ~~~~~~~~D~vVlAtG~~ 212 (276)
... -.+|.||+..|..
T Consensus 74 -~~~-~~a~~vv~s~~i~ 89 (491)
T 2f00_A 74 -ENV-RDASVVVVSSAIS 89 (491)
T ss_dssp -GGG-TTCSEEEECTTCC
T ss_pred -HHc-CCCCEEEECCCCC
Confidence 111 2589999998864
No 449
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=74.95 E-value=1.6 Score=39.49 Aligned_cols=28 Identities=7% Similarity=-0.094 Sum_probs=24.9
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRVG 71 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~lG 71 (276)
+++|+.+|.. +++.|++|.|+|+....+
T Consensus 14 G~~g~~~a~~-l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 14 GYGAAVSALR-LGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEEESSCCCC
T ss_pred CHHHHHHHHH-HHhCCCcEEEEeCCCCCC
Confidence 6899999999 899999999999987554
No 450
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=74.91 E-value=4.2 Score=36.46 Aligned_cols=65 Identities=11% Similarity=0.040 Sum_probs=47.2
Q ss_pred hccCCCCCCCCCCCC-cchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccccc
Q psy12810 116 VTNHTPQSDNQTKHC-PPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 194 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~-~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~ 194 (276)
++|-|.+ |++ +|..|.+.|++|++.|.... ...+.+.+.|+++..+...
T Consensus 23 viG~G~s-----G~s~~A~~l~~~G~~V~~~D~~~~--------------------~~~~~l~~~gi~~~~g~~~----- 72 (475)
T 1p3d_A 23 FIGIGGA-----GMSGIAEILLNEGYQISGSDIADG--------------------VVTQRLAQAGAKIYIGHAE----- 72 (475)
T ss_dssp EETTTST-----THHHHHHHHHHHTCEEEEEESCCS--------------------HHHHHHHHTTCEEEESCCG-----
T ss_pred EEeecHH-----HHHHHHHHHHhCCCEEEEECCCCC--------------------HHHHHHHhCCCEEECCCCH-----
Confidence 4899998 997 89999999999999987542 1123467789998776422
Q ss_pred hhhhhcccCEEEEcCCCC
Q psy12810 195 AKELYEEFDALLLCTGAT 212 (276)
Q Consensus 195 ~~~~~~~~D~vVlAtG~~ 212 (276)
... -.+|.||+..|..
T Consensus 73 -~~~-~~a~~vv~s~~i~ 88 (475)
T 1p3d_A 73 -EHI-EGASVVVVSSAIK 88 (475)
T ss_dssp -GGG-TTCSEEEECTTSC
T ss_pred -HHc-CCCCEEEECCCCC
Confidence 111 2589999998864
No 451
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=74.74 E-value=0.45 Score=44.18 Aligned_cols=34 Identities=9% Similarity=-0.123 Sum_probs=29.4
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhh-CCcEEEEEcCCCc
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNI-VGHSVTVFERNDR 150 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~-~G~~Vtvie~~~~ 150 (276)
+.+.|||+|++ |+.+|..|++ .|.+|.|+|++..
T Consensus 25 ~d~iivG~G~~-----g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 25 YDYIIAGGGLT-----GLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp EEEEEECCSHH-----HHHHHHHHHTSTTCCEEEEESSCC
T ss_pred CCEEEECcCHH-----HHHHHHHHHhCCCCcEEEEecCCc
Confidence 34446999999 9999999999 8999999998764
No 452
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=74.66 E-value=1.1 Score=38.30 Aligned_cols=30 Identities=10% Similarity=0.145 Sum_probs=26.0
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERN 148 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~ 148 (276)
+.++|+|.. |...|..|++.|++|+++++.
T Consensus 6 I~IiGaG~~-----G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 6 ICIVGAGAV-----GGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp EEEESCCHH-----HHHHHHHHHHTTCCEEEECCH
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCEEEEEECh
Confidence 345899988 999999999999999999864
No 453
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=73.70 E-value=1.8 Score=40.00 Aligned_cols=26 Identities=15% Similarity=-0.190 Sum_probs=23.3
Q ss_pred ccchhchHHHHHhhCC-CeEEEeccCCC
Q psy12810 43 FTATLSYHISIQHLVG-HSVTVFERNDR 69 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G-~~V~l~Ek~~~ 69 (276)
++||+.+|.+ |++.| ++|.|+|+.+.
T Consensus 15 G~AG~v~A~r-Lse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 15 GTAGNTVAGR-LAENPNVTVLIVEAGIG 41 (577)
T ss_dssp SHHHHHHHHH-HTTSTTSCEEEECSSCS
T ss_pred cHHHHHHHHH-HHhCCCCcEEEEecCCC
Confidence 6899999999 88888 79999999765
No 454
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=73.51 E-value=2 Score=38.46 Aligned_cols=34 Identities=12% Similarity=0.110 Sum_probs=29.0
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCcc
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRV 151 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~ 151 (276)
.+.+||.|.. |+.+|..|++.|++|+++++.+..
T Consensus 10 ~~~vIGlG~v-----G~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 10 RIAMIGTGYV-----GLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHTTCEEEEECSCSTT
T ss_pred EEEEEcCCHH-----HHHHHHHHHHCCCEEEEEeCCHHH
Confidence 3445888887 999999999999999999988754
No 455
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=73.47 E-value=1.3 Score=37.65 Aligned_cols=47 Identities=9% Similarity=0.058 Sum_probs=27.9
Q ss_pred CCCeEEeccccCccchhhhccCCCCCCCCCCCCcchhhhhCC----cEEEEEcCCC
Q psy12810 98 EGIEFKTNINVGKDIAAKVTNHTPQSDNQTKHCPPLIVNIVG----HSVTVFERND 149 (276)
Q Consensus 98 ~gv~~~~~~~v~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G----~~Vtvie~~~ 149 (276)
.||++-+.......+.|.+||.|.. |...|..|.+.| ++|+++++.+
T Consensus 9 ~~~~~~~~~~~~~~mkI~iIG~G~m-----G~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 9 SGVDLGTENLYFQSMSVGFIGAGQL-----AFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -------------CCCEEEESCSHH-----HHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cccccCCchhccCCCEEEEECCCHH-----HHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3444433322223344556999888 999999999999 8999998765
No 456
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=73.05 E-value=0.54 Score=43.21 Aligned_cols=34 Identities=12% Similarity=-0.022 Sum_probs=29.2
Q ss_pred chhhhccCCCCCCCCCCCCcchhhhhC-CcEEEEEcCCCc
Q psy12810 112 IAAKVTNHTPQSDNQTKHCPPLIVNIV-GHSVTVFERNDR 150 (276)
Q Consensus 112 v~v~iiG~gp~~~g~~Gl~~A~~l~~~-G~~Vtvie~~~~ 150 (276)
+.+.|||+|++ |+.+|..|++. |.+|.|+|++..
T Consensus 14 ~d~~ivG~G~~-----G~~~a~~l~~~~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 14 FDYIVVGGGSA-----GAAVAARLSEDPAVSVALVEAGPD 48 (546)
T ss_dssp EEEEEECCSHH-----HHHHHHHHTTSTTSCEEEECSSCC
T ss_pred CCEEEECcCHH-----HHHHHHHHHhCCCCCEEEEecCCc
Confidence 34445999999 99999999997 899999998764
No 457
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=72.44 E-value=0.98 Score=38.52 Aligned_cols=30 Identities=3% Similarity=-0.170 Sum_probs=25.7
Q ss_pred hhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
.++|.|.. |...|..|.+.|+ |+++|+++.
T Consensus 119 iI~G~G~~-----g~~l~~~L~~~g~-v~vid~~~~ 148 (336)
T 1lnq_A 119 VICGWSES-----TLECLRELRGSEV-FVLAEDENV 148 (336)
T ss_dssp EEESCCHH-----HHHHHTTGGGSCE-EEEESCGGG
T ss_pred EEECCcHH-----HHHHHHHHHhCCc-EEEEeCChh
Confidence 34898888 9999999999999 999997664
No 458
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=72.25 E-value=3.2 Score=34.43 Aligned_cols=31 Identities=16% Similarity=-0.018 Sum_probs=26.5
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
+.++|.|.. |...|..|.+.|++|+++++.+
T Consensus 8 i~iiG~G~~-----G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 8 VGFIGLGIM-----GKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp EEEECCSTT-----HHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECchHH-----HHHHHHHHHhCCCEEEEEeCCH
Confidence 445899888 9999999999999999998754
No 459
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=71.26 E-value=3.6 Score=34.09 Aligned_cols=29 Identities=3% Similarity=-0.094 Sum_probs=25.5
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
+||.|.. |...|..|.+.|++|+++++.+
T Consensus 5 iiG~G~m-----G~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 5 FIGLGNM-----GNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp EECCSTT-----HHHHHHHHHHTTCCEEEECSST
T ss_pred EEeccHH-----HHHHHHHHHHCCCEEEEEeCCH
Confidence 4888888 9999999999999999998765
No 460
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=70.18 E-value=1.9 Score=39.41 Aligned_cols=26 Identities=19% Similarity=0.015 Sum_probs=23.2
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDRV 70 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~l 70 (276)
++||+.+|.+ |++ |++|.|+|+.+..
T Consensus 35 G~AG~v~A~r-Lse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 35 GTSGCPLAAT-LSE-KYKVLVLERGSLP 60 (536)
T ss_dssp STTHHHHHHH-HTT-TSCEEEECSSBCG
T ss_pred cHHHHHHHHH-Hhc-CCcEEEEecCCCc
Confidence 6999999999 888 9999999997644
No 461
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=69.84 E-value=2.6 Score=35.96 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=26.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
+.++|+|.. |...|..|++.|++|+++++.+
T Consensus 7 i~iiG~G~~-----G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 7 YAVLGLGNG-----GHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCEEEEEeCCH
Confidence 445899887 9999999999999999998754
No 462
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=69.52 E-value=2 Score=36.07 Aligned_cols=31 Identities=10% Similarity=-0.135 Sum_probs=26.7
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
+.+||.|.. |...|..|++.|++|+++++.+
T Consensus 10 I~iIG~G~m-----G~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 10 VGIVGLGSM-----GMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECCCHH-----HHHHHHHHHHCCCeEEEEECCH
Confidence 444898888 9999999999999999998765
No 463
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=68.89 E-value=4.1 Score=33.75 Aligned_cols=35 Identities=14% Similarity=0.127 Sum_probs=28.6
Q ss_pred CccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 109 GKDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 109 ~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
++.+.+ +|+|.+ |-.++..|.+.|.+|+|+.|...
T Consensus 118 ~k~vlv--lGaGGa-----araia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALI--LGAGGS-----AKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEE--ECCSHH-----HHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEE--ECCCHH-----HHHHHHHHHHCCCEEEEEeCCHH
Confidence 344445 899988 88999999999999999998763
No 464
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=68.78 E-value=1.4 Score=39.41 Aligned_cols=32 Identities=9% Similarity=0.049 Sum_probs=27.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
|.+||.|.. |...|..|++.|++|+++++.+.
T Consensus 5 I~VIG~G~v-----G~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 5 IAVVGIGYV-----GLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEECcCHH-----HHHHHHHHHhcCCEEEEEECCHH
Confidence 344888887 99999999999999999998764
No 465
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=68.17 E-value=3.8 Score=37.09 Aligned_cols=67 Identities=18% Similarity=0.178 Sum_probs=0.0
Q ss_pred CccchhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeee
Q psy12810 109 GKDIAAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 188 (276)
Q Consensus 109 ~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~ 188 (276)
++.+.| +|.|+. |..+|..++..|.+|+++|+.+ .......+.|+++
T Consensus 274 GktV~I--iG~G~I-----G~~~A~~lka~Ga~Viv~d~~~---------------------~~~~~A~~~Ga~~----- 320 (494)
T 3ce6_A 274 GKKVLI--CGYGDV-----GKGCAEAMKGQGARVSVTEIDP---------------------INALQAMMEGFDV----- 320 (494)
T ss_dssp TCEEEE--ECCSHH-----HHHHHHHHHHTTCEEEEECSCH---------------------HHHHHHHHTTCEE-----
T ss_pred cCEEEE--EccCHH-----HHHHHHHHHHCCCEEEEEeCCH---------------------HHHHHHHHcCCEE-----
Q ss_pred eccccchhhhhcccCEEEEcCCCC
Q psy12810 189 VGKDIAAKELYEEFDALLLCTGAT 212 (276)
Q Consensus 189 v~~~~~~~~~~~~~D~vVlAtG~~ 212 (276)
.+-.+..-.+|.||.++|..
T Consensus 321 ----~~l~e~l~~aDvVi~atgt~ 340 (494)
T 3ce6_A 321 ----VTVEEAIGDADIVVTATGNK 340 (494)
T ss_dssp ----CCHHHHGGGCSEEEECSSSS
T ss_pred ----ecHHHHHhCCCEEEECCCCH
No 466
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=67.82 E-value=14 Score=30.63 Aligned_cols=88 Identities=13% Similarity=0.181 Sum_probs=48.8
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEee-eeeccccc
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTN-INVGKDIA 194 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~-~~v~~~~~ 194 (276)
|+|+... +|..+|..|++.|.+|+++++.+...+... . ....+-.....+.+...+.++..- ..+.....
T Consensus 33 VTGas~G----IG~aia~~la~~G~~V~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 33 ITGAARG----QGRSHAITLAREGADIIAIDVCKQLDGVKL---P--MSTPDDLAETVRQVEALGRRIIASQVDVRDFDA 103 (299)
T ss_dssp EESTTSH----HHHHHHHHHHHTTCEEEEEECCSCCTTCCS---C--CCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred EECCCCH----HHHHHHHHHHHCCCEEEEEecccccccccc---c--ccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 3777654 399999999999999999998754321110 0 122333344445555555544332 11211000
Q ss_pred hhh-------hhcccCEEEEcCCCC
Q psy12810 195 AKE-------LYEEFDALLLCTGAT 212 (276)
Q Consensus 195 ~~~-------~~~~~D~vVlAtG~~ 212 (276)
-.. ..-..|.||...|..
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCC
Confidence 000 011579999999975
No 467
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=67.67 E-value=6.4 Score=35.52 Aligned_cols=25 Identities=8% Similarity=-0.153 Sum_probs=21.3
Q ss_pred ccchhc-hHHHHHhhCCCeEEEeccCC
Q psy12810 43 FTATLS-YHISIQHLVGHSVTVFERND 68 (276)
Q Consensus 43 ~paGl~-aA~~~aa~~G~~V~l~Ek~~ 68 (276)
...||+ +|+. +.++|++|++.|.+.
T Consensus 31 G~sG~s~~A~~-l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 31 GGAGMGGIAEV-LANEGYQISGSDLAP 56 (494)
T ss_dssp TSTTHHHHHHH-HHHTTCEEEEECSSC
T ss_pred cHhhHHHHHHH-HHhCCCeEEEEECCC
Confidence 578997 5888 899999999999854
No 468
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=67.41 E-value=4 Score=31.12 Aligned_cols=24 Identities=17% Similarity=0.300 Sum_probs=20.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 252 AKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 252 ~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
..+++++|+|.|.+|..+|..+.+
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~ 60 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRA 60 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHh
Confidence 457799999999999999988753
No 469
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=66.63 E-value=4.7 Score=33.43 Aligned_cols=31 Identities=10% Similarity=-0.007 Sum_probs=26.3
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
+.++|.|.. |...|..|.+.|++|+++++.+
T Consensus 7 i~iiG~G~~-----G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 7 IGFIGLGAM-----GKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp EEEECCCTT-----HHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEECccHH-----HHHHHHHHHHCCCeEEEEeCCH
Confidence 445898888 9999999999999999998754
No 470
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=65.91 E-value=3.5 Score=33.54 Aligned_cols=29 Identities=7% Similarity=0.105 Sum_probs=26.1
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCc-EEEEEcCCC
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGH-SVTVFERND 149 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~-~Vtvie~~~ 149 (276)
++|+|.. |..+|..|++.|. +++++|+..
T Consensus 36 VvG~Gg~-----G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 36 IVGLGGL-----GCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp EECCSHH-----HHHHHHHHHHHTCSEEEEECCCB
T ss_pred EEeeCHH-----HHHHHHHHHHcCCCeEEEEcCCC
Confidence 4899988 9999999999997 899999875
No 471
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=64.66 E-value=12 Score=30.50 Aligned_cols=89 Identities=17% Similarity=0.266 Sum_probs=49.8
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeee-eeccccc
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNI-NVGKDIA 194 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~-~v~~~~~ 194 (276)
|+|+... +|.++|..|++.|.+|+++++.........+ ...+.+-.+...+.+.+.+.++..-. .+.....
T Consensus 20 VTGas~g----IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 20 ITGAARG----QGRSHAVRLAAEGADIIACDICAPVSASVTY----APASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp EESTTSH----HHHHHHHHHHHTTCEEEEEECCSCCCTTCCS----CCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred EECCCcH----HHHHHHHHHHHCCCEEEEEeccccccccccc----cccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 3777654 4999999999999999999886532211111 12234444445555566665443321 1211000
Q ss_pred hhh-------hhcccCEEEEcCCCC
Q psy12810 195 AKE-------LYEEFDALLLCTGAT 212 (276)
Q Consensus 195 ~~~-------~~~~~D~vVlAtG~~ 212 (276)
-.. ..-..|.||...|..
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 000 011579999999976
No 472
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=64.48 E-value=12 Score=30.42 Aligned_cols=88 Identities=14% Similarity=0.198 Sum_probs=48.3
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEee-eeeccccc
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTN-INVGKDIA 194 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~-~~v~~~~~ 194 (276)
|+|+... +|...|..|++.|++|+++++.+..... .+ .....+-.....+.+...+.++..- ..+.....
T Consensus 18 VTGas~g----IG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 18 ITGAARG----QGRAHAVRLAADGADIIAVDLCDQIASV-PY----PLATPEELAATVKLVEDIGSRIVARQADVRDRES 88 (278)
T ss_dssp EESTTSH----HHHHHHHHHHHTTCEEEEEECCSCCTTC-SS----CCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred EECCCCh----HHHHHHHHHHHCCCeEEEEecccccccc-cc----cccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 3777654 3999999999999999999987643211 00 1122333334444455555443332 12211000
Q ss_pred hhh-------hhcccCEEEEcCCCC
Q psy12810 195 AKE-------LYEEFDALLLCTGAT 212 (276)
Q Consensus 195 ~~~-------~~~~~D~vVlAtG~~ 212 (276)
-.. ..-..|.||-..|..
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 000 011579999999976
No 473
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=63.35 E-value=2 Score=36.11 Aligned_cols=30 Identities=0% Similarity=-0.025 Sum_probs=25.1
Q ss_pred hhccCCCCCCCCCCCCcchhhhhCCc--EEEEEcCCC
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIVGH--SVTVFERND 149 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~G~--~Vtvie~~~ 149 (276)
.++|+|.. |...|..|+..|. +|+++|..+
T Consensus 4 ~ViGaG~v-----G~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 4 GFVGAGRV-----GSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEECCSHH-----HHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEECCCHH-----HHHHHHHHHhCCCCCeEEEEECCh
Confidence 34898877 9999999998887 899999765
No 474
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=63.31 E-value=3.6 Score=37.28 Aligned_cols=26 Identities=8% Similarity=-0.047 Sum_probs=23.5
Q ss_pred ccchhchHHHHHhhCCCeEEEeccCCC
Q psy12810 43 FTATLSYHISIQHLVGHSVTVFERNDR 69 (276)
Q Consensus 43 ~paGl~aA~~~aa~~G~~V~l~Ek~~~ 69 (276)
+++|+.+|.. +++.|++|.|+|+...
T Consensus 20 G~~g~~~a~~-l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 20 GYGGAVAALR-LTQAGIPTQIVEMGRS 45 (507)
T ss_dssp SHHHHHHHHH-HHHTTCCEEEECSSCC
T ss_pred CHHHHHHHHH-HHHCCCcEEEEECCCC
Confidence 6899999999 8899999999999753
No 475
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=62.65 E-value=2.8 Score=35.06 Aligned_cols=30 Identities=13% Similarity=0.032 Sum_probs=25.6
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhC-----C-cEEEEEcC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIV-----G-HSVTVFER 147 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~-----G-~~Vtvie~ 147 (276)
.+.++|+|.. |...|..|++. | ++|+++++
T Consensus 10 ~I~iiG~G~m-----G~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGV-----GGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHH-----HHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHH-----HHHHHHHHHhCccccCCCCCEEEEEc
Confidence 3445999988 99999999988 9 99999986
No 476
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=62.63 E-value=1.5 Score=38.56 Aligned_cols=29 Identities=10% Similarity=0.091 Sum_probs=25.0
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
++|.|.. |...|..|++ |++|+++++.+.
T Consensus 5 VIG~G~v-----G~~~A~~La~-G~~V~~~d~~~~ 33 (402)
T 1dlj_A 5 VAGSGYV-----GLSLGVLLSL-QNEVTIVDILPS 33 (402)
T ss_dssp EECCSHH-----HHHHHHHHTT-TSEEEEECSCHH
T ss_pred EECCCHH-----HHHHHHHHhC-CCEEEEEECCHH
Confidence 4788777 9999999999 999999998653
No 477
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=61.98 E-value=6.9 Score=33.18 Aligned_cols=32 Identities=6% Similarity=-0.014 Sum_probs=26.4
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCc-EEEEEcCCCc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGH-SVTVFERNDR 150 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~-~Vtvie~~~~ 150 (276)
+.++|+|.. |...|..|+..|+ +|+++|..+.
T Consensus 7 I~VIGaG~v-----G~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 7 IVLVGSGMI-----GGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEEECSSSS
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCCeEEEEeCCHH
Confidence 334999887 9999999999998 8999997653
No 478
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=61.67 E-value=3.8 Score=33.64 Aligned_cols=29 Identities=14% Similarity=-0.026 Sum_probs=24.7
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
++|.|.. |...|..|.+.|++|+++++.+
T Consensus 5 iiG~G~~-----G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 5 VVGLGLI-----GASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EECCSHH-----HHHHHHHHHHTTCEEEEECSCH
T ss_pred EEcCcHH-----HHHHHHHHHHCCCEEEEEECCH
Confidence 4888777 8899999999999999998754
No 479
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=61.59 E-value=4.2 Score=36.48 Aligned_cols=68 Identities=12% Similarity=0.016 Sum_probs=46.0
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeeeeeccccch
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAA 195 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~~~~~ 195 (276)
|.|.|-+ |+ |..|.++|++|+..|..... ..+.+++.|+.+..+...
T Consensus 20 I~G~G~s-----gl--A~~l~~~G~~V~g~D~~~~~--------------------~~~~L~~~gi~~~~g~~~------ 66 (469)
T 1j6u_A 20 IGGIGMS-----AV--ALHEFSNGNDVYGSNIEETE--------------------RTAYLRKLGIPIFVPHSA------ 66 (469)
T ss_dssp TTSHHHH-----HH--HHHHHHTTCEEEEECSSCCH--------------------HHHHHHHTTCCEESSCCT------
T ss_pred EcccCHH-----HH--HHHHHhCCCEEEEEcCCCCH--------------------HHHHHHhCCCEEECCCCH------
Confidence 3566666 77 89999999999999975531 113467789988765311
Q ss_pred hhhhcccCEEEEcCCCCCCCCCC
Q psy12810 196 KELYEEFDALLLCTGATWPRDLP 218 (276)
Q Consensus 196 ~~~~~~~D~vVlAtG~~~p~~~~ 218 (276)
... ..+|.||++.|-. +..|.
T Consensus 67 ~~~-~~~d~vV~spgi~-~~~p~ 87 (469)
T 1j6u_A 67 DNW-YDPDLVIKTPAVR-DDNPE 87 (469)
T ss_dssp TSC-CCCSEEEECTTCC-TTCHH
T ss_pred HHC-CCCCEEEECCCcC-CCCHH
Confidence 111 2589999999976 55443
No 480
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=61.10 E-value=6.1 Score=34.67 Aligned_cols=25 Identities=28% Similarity=0.409 Sum_probs=21.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 252 AKDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 252 ~~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
..+++|+|+|+|.+|.-++..++.+
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~ 194 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSL 194 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC
Confidence 3688999999999999988877653
No 481
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=60.67 E-value=14 Score=29.91 Aligned_cols=79 Identities=5% Similarity=0.107 Sum_probs=45.8
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeee-eeccccc
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNI-NVGKDIA 194 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~-~v~~~~~ 194 (276)
|+|+... +|.+.|..|++.|.+|+++.+..+ +.+-.+...+.+...+.++..-. .+.....
T Consensus 16 VTGas~G----IG~aia~~la~~G~~V~~~~r~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 77 (262)
T 3ksu_A 16 IAGGIKN----LGALTAKTFALESVNLVLHYHQAK--------------DSDTANKLKDELEDQGAKVALYQSDLSNEEE 77 (262)
T ss_dssp EETCSSH----HHHHHHHHHTTSSCEEEEEESCGG--------------GHHHHHHHHHHHHTTTCEEEEEECCCCSHHH
T ss_pred EECCCch----HHHHHHHHHHHCCCEEEEEecCcc--------------CHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence 3777654 399999999999999999876442 22223344445555565544321 2211000
Q ss_pred hh-------hhhcccCEEEEcCCCC
Q psy12810 195 AK-------ELYEEFDALLLCTGAT 212 (276)
Q Consensus 195 ~~-------~~~~~~D~vVlAtG~~ 212 (276)
-. +..-..|.||...|..
T Consensus 78 v~~~~~~~~~~~g~iD~lvnnAg~~ 102 (262)
T 3ksu_A 78 VAKLFDFAEKEFGKVDIAINTVGKV 102 (262)
T ss_dssp HHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 00 0011579999999975
No 482
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=60.62 E-value=5.7 Score=33.16 Aligned_cols=29 Identities=17% Similarity=0.070 Sum_probs=24.8
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
++|.|.. |..+|..|...|.+|+++++..
T Consensus 162 IiG~G~i-----G~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 162 VLGLGRT-----GMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp EECCSHH-----HHHHHHHHHHTTCEEEEEESSH
T ss_pred EEcccHH-----HHHHHHHHHHCCCEEEEEECCH
Confidence 4788877 9999999999999999998754
No 483
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=60.61 E-value=3.2 Score=33.73 Aligned_cols=29 Identities=7% Similarity=-0.094 Sum_probs=24.5
Q ss_pred hccCCCCCCCCCCCCcchhhhhCC-cEEEEEcCCC
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVG-HSVTVFERND 149 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G-~~Vtvie~~~ 149 (276)
+||.|.. |...|..|.+.| ++|+++++.+
T Consensus 5 iiG~G~m-----G~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 5 FLGGGNM-----AAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EECCSHH-----HHHHHHHHHHHCSCEEEEECSSH
T ss_pred EECchHH-----HHHHHHHHHHCCCCeEEEECCCH
Confidence 4888777 888999999999 9999998754
No 484
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=60.54 E-value=16 Score=29.73 Aligned_cols=89 Identities=10% Similarity=0.166 Sum_probs=48.9
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeee-eeccccc
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNI-NVGKDIA 194 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~-~v~~~~~ 194 (276)
|+|+... +|...|..|++.|.+|+++++.........+ ...+.+-.....+.+...+.++..-. .+.....
T Consensus 16 VTGas~G----IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 16 ITGAARG----QGRAHAVRMAAEGADIIAVDIAGKLPSCVPY----DPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp EESTTSH----HHHHHHHHHHHTTCEEEEEECCSCCCTTCCS----CCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred EECCccH----HHHHHHHHHHHcCCEEEEEeccccccccccc----cccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 3777654 3999999999999999999886542211111 11233334444455555554443321 1210000
Q ss_pred hh-------hhhcccCEEEEcCCCC
Q psy12810 195 AK-------ELYEEFDALLLCTGAT 212 (276)
Q Consensus 195 ~~-------~~~~~~D~vVlAtG~~ 212 (276)
-. +..-..|.||...|..
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 00 0012579999999976
No 485
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=60.51 E-value=2.4 Score=37.81 Aligned_cols=39 Identities=18% Similarity=0.179 Sum_probs=29.7
Q ss_pred hhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeec
Q psy12810 115 KVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYG 158 (276)
Q Consensus 115 ~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~ 158 (276)
.+||-|-. |+.+|..|++.|++|+.+|-++..-..++.+
T Consensus 25 aViGlGYV-----GLp~A~~~A~~G~~V~g~Did~~kV~~ln~G 63 (444)
T 3vtf_A 25 SVLGLGYV-----GVVHAVGFALLGHRVVGYDVNPSIVERLRAG 63 (444)
T ss_dssp EEECCSHH-----HHHHHHHHHHHTCEEEEECSCHHHHHHHHTT
T ss_pred EEEccCHH-----HHHHHHHHHhCCCcEEEEECCHHHHHHHHCC
Confidence 34788777 9999999999999999999876532234433
No 486
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=60.32 E-value=3.1 Score=36.53 Aligned_cols=70 Identities=19% Similarity=0.061 Sum_probs=0.0
Q ss_pred CccchhhhccCCCCCCCCCCCCcchhhhhCCc-EEEEEcCCCccceeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEeee
Q psy12810 109 GKDIAAKVTNHTPQSDNQTKHCPPLIVNIVGH-SVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNI 187 (276)
Q Consensus 109 ~~~v~v~iiG~gp~~~g~~Gl~~A~~l~~~G~-~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~~ 187 (276)
++.+.+ +|+|+. |..++..|...|. +|+++++... ...+...+.|.+.....
T Consensus 167 g~~VlI--iGaG~i-----G~~~a~~l~~~G~~~V~v~~r~~~--------------------ra~~la~~~g~~~~~~~ 219 (404)
T 1gpj_A 167 DKTVLV--VGAGEM-----GKTVAKSLVDRGVRAVLVANRTYE--------------------RAVELARDLGGEAVRFD 219 (404)
T ss_dssp TCEEEE--ESCCHH-----HHHHHHHHHHHCCSEEEEECSSHH--------------------HHHHHHHHHTCEECCGG
T ss_pred CCEEEE--EChHHH-----HHHHHHHHHHCCCCEEEEEeCCHH--------------------HHHHHHHHcCCceecHH
Q ss_pred eeccccchhhhhcccCEEEEcCCC
Q psy12810 188 NVGKDIAAKELYEEFDALLLCTGA 211 (276)
Q Consensus 188 ~v~~~~~~~~~~~~~D~vVlAtG~ 211 (276)
+-.+..-.+|.||.+||.
T Consensus 220 ------~l~~~l~~aDvVi~at~~ 237 (404)
T 1gpj_A 220 ------ELVDHLARSDVVVSATAA 237 (404)
T ss_dssp ------GHHHHHHTCSEEEECCSS
T ss_pred ------hHHHHhcCCCEEEEccCC
No 487
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=59.86 E-value=3.7 Score=33.97 Aligned_cols=31 Identities=6% Similarity=-0.030 Sum_probs=26.3
Q ss_pred hhhccC-CCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 114 AKVTNH-TPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 114 v~iiG~-gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
+.+||. |.. |...|..|.+.|++|+++++.+
T Consensus 14 I~iIG~tG~m-----G~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 14 VAILGAGGKM-----GARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp EEEETTTSHH-----HHHHHHHHHHSSSEEEEECCSH
T ss_pred EEEECCCCHH-----HHHHHHHHHhCCCEEEEEECCH
Confidence 445899 887 9999999999999999998754
No 488
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=59.80 E-value=3.6 Score=37.71 Aligned_cols=32 Identities=13% Similarity=0.003 Sum_probs=27.8
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDR 150 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~ 150 (276)
+.++|.|.. |...|..|.+.|++|+++|.++.
T Consensus 130 viI~G~g~~-----g~~la~~L~~~~~~vvvid~~~~ 161 (565)
T 4gx0_A 130 ILIFGIDPI-----TRTLIRKLESRNHLFVVVTDNYD 161 (565)
T ss_dssp EEEESCCHH-----HHHHHHHTTTTTCCEEEEESCHH
T ss_pred EEEECCChH-----HHHHHHHHHHCCCCEEEEECCHH
Confidence 335899998 99999999999999999998764
No 489
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=59.68 E-value=8.2 Score=32.80 Aligned_cols=32 Identities=6% Similarity=0.044 Sum_probs=26.6
Q ss_pred hhhccCCCCCCCCCCCCcchhhhhCCc-EEEEEcCCCc
Q psy12810 114 AKVTNHTPQSDNQTKHCPPLIVNIVGH-SVTVFERNDR 150 (276)
Q Consensus 114 v~iiG~gp~~~g~~Gl~~A~~l~~~G~-~Vtvie~~~~ 150 (276)
+.++|+|.. |...|..|+..|+ +|+++|..+.
T Consensus 10 I~viGaG~v-----G~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 10 IALIGSGMI-----GGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEEECSSSS
T ss_pred EEEECCCHH-----HHHHHHHHHhCCCCeEEEEeCCch
Confidence 345899887 9999999999888 9999997663
No 490
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=59.53 E-value=4 Score=32.29 Aligned_cols=32 Identities=16% Similarity=0.014 Sum_probs=26.3
Q ss_pred hhhhccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCC
Q psy12810 113 AAKVTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERND 149 (276)
Q Consensus 113 ~v~iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~ 149 (276)
.+.++|.|.. |...|..|.+.|++|+++++.+
T Consensus 30 ~I~iiG~G~~-----G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 30 KVGILGSGDF-----ARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CEEEECCSHH-----HHHHHHHHHHTTCCEEEEESSH
T ss_pred EEEEEccCHH-----HHHHHHHHHHCCCEEEEEeCCH
Confidence 3445898877 8899999999999999998754
No 491
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=59.47 E-value=4.8 Score=37.78 Aligned_cols=26 Identities=15% Similarity=0.116 Sum_probs=21.9
Q ss_pred chHHHHHhhCCCeEEEeccCCCCCcee
Q psy12810 48 SYHISIQHLVGHSVTVFERNDRVGGLL 74 (276)
Q Consensus 48 ~aA~~~aa~~G~~V~l~Ek~~~lGG~~ 74 (276)
..|.. |++.|.+|.++||++.+||.+
T Consensus 22 ~~a~~-~~~~g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 22 IIAAA-CSRSGQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp HHHHH-HHHTTCCEEEECSSSSSCGGG
T ss_pred HHHHH-HHhCCCEEEEEcCCCcccCcc
Confidence 33555 688999999999999999977
No 492
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=58.95 E-value=7.6 Score=32.37 Aligned_cols=65 Identities=20% Similarity=0.273 Sum_probs=0.0
Q ss_pred HHHHHhCCCeEEeccccCccchhhhccCCC-CCCCCCCCCcchhhhhCCcEEEEEcCCCccceeeeecCCCCCCcHHHHH
Q psy12810 92 VKLLAAEGIEFKTNINVGKDIAAKVTNHTP-QSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQ 170 (276)
Q Consensus 92 ~~~l~~~gv~~~~~~~v~~~v~v~iiG~gp-~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~gg~~~~~~~~~~~~~~~~~ 170 (276)
.+.+++.++++. ++.+.+ +|.+. . |..+|..|...|..||+..+...
T Consensus 148 ~~lL~~~~i~l~-----Gk~vvV--vGrs~iV-----G~p~A~lL~~~gAtVtv~h~~t~-------------------- 195 (285)
T 3p2o_A 148 MKLLKAYEIDLE-----GKDAVI--IGASNIV-----GRPMATMLLNAGATVSVCHIKTK-------------------- 195 (285)
T ss_dssp HHHHHHTTCCCT-----TCEEEE--ECCCTTT-----HHHHHHHHHHTTCEEEEECTTCS--------------------
T ss_pred HHHHHHhCCCCC-----CCEEEE--ECCCchH-----HHHHHHHHHHCCCeEEEEeCCch--------------------
Q ss_pred HHHHHHHhcCcEEEeeeeeccccchhhhhcccCEEEEcCCC
Q psy12810 171 RRVKLLAAEGIEFKTNINVGKDIAAKELYEEFDALLLCTGA 211 (276)
Q Consensus 171 ~~~~~l~~~gv~i~~~~~v~~~~~~~~~~~~~D~vVlAtG~ 211 (276)
+-.+..-.+|.||.|+|.
T Consensus 196 -----------------------~L~~~~~~ADIVI~Avg~ 213 (285)
T 3p2o_A 196 -----------------------DLSLYTRQADLIIVAAGC 213 (285)
T ss_dssp -----------------------CHHHHHTTCSEEEECSSC
T ss_pred -----------------------hHHHHhhcCCEEEECCCC
No 493
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=58.71 E-value=7.2 Score=34.29 Aligned_cols=24 Identities=33% Similarity=0.533 Sum_probs=20.7
Q ss_pred CCCeEEEEcCChHHHHHHHHhhcC
Q psy12810 253 KDKNVIVIGGGDTGCDCIATSLRQ 276 (276)
Q Consensus 253 ~~k~vvVIGgG~~G~E~A~~~~r~ 276 (276)
.+.+|+|+|+|.+|.-+|..++.+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l 212 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL 212 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC
Confidence 568999999999999998887653
No 494
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=58.38 E-value=7.3 Score=33.80 Aligned_cols=24 Identities=25% Similarity=0.480 Sum_probs=20.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 252 AKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 252 ~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
..+++|+|+|+|.+|..+|..++.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~ 189 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANG 189 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh
Confidence 468999999999999999887764
No 495
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=58.25 E-value=23 Score=28.83 Aligned_cols=91 Identities=16% Similarity=0.217 Sum_probs=49.1
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcCCCccc-eeeeecCCCCCCcHHHHHHHHHHHHhcCcEEEee-eeecccc
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFERNDRVG-GLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTN-INVGKDI 193 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~~~~~g-g~~~~~~~~~~~~~~~~~~~~~~l~~~gv~i~~~-~~v~~~~ 193 (276)
|+|+... +|...|..|++.|.+|+++++.+... ..+...++ ....+-.....+.+...+.++..- ..+....
T Consensus 16 VTGas~g----IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 16 VTGAARG----QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIP--ASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp EESTTSH----HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSC--CCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred EeCCCch----HHHHHHHHHHHCCCeEEEEeccccccccccccccc--cCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 3777654 39999999999999999998864321 01111111 122333444445555555444332 1121100
Q ss_pred chh-------hhhcccCEEEEcCCCC
Q psy12810 194 AAK-------ELYEEFDALLLCTGAT 212 (276)
Q Consensus 194 ~~~-------~~~~~~D~vVlAtG~~ 212 (276)
.-. +..-..|.||...|..
T Consensus 90 ~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 90 ALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCccc
Confidence 000 0011579999999975
No 496
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=58.16 E-value=5.9 Score=34.57 Aligned_cols=23 Identities=35% Similarity=0.546 Sum_probs=20.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhhc
Q psy12810 253 KDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 253 ~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
.+++|+|||+|.+|..+|..++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~ 205 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKR 205 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHH
Confidence 57899999999999999887764
No 497
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=57.38 E-value=7.7 Score=33.70 Aligned_cols=24 Identities=38% Similarity=0.501 Sum_probs=20.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 252 AKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 252 ~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
..+++|+|+|+|.+|.-++..++.
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~ 193 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKR 193 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH
Confidence 468999999999999998887764
No 498
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=57.12 E-value=5 Score=36.17 Aligned_cols=26 Identities=12% Similarity=-0.045 Sum_probs=22.5
Q ss_pred ccchhchHHHHHhh-CCCeEEEeccCCC
Q psy12810 43 FTATLSYHISIQHL-VGHSVTVFERNDR 69 (276)
Q Consensus 43 ~paGl~aA~~~aa~-~G~~V~l~Ek~~~ 69 (276)
++||...|.+ |++ .|++|.|+|+.+.
T Consensus 26 G~aG~v~A~r-Lse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 26 GSAGSLLAAR-LSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp SHHHHHHHHH-HTTSTTSCEEEECSSBC
T ss_pred cHHHHHHHHH-HHhCCCCeEEEEcCCCC
Confidence 6899999999 777 7899999999653
No 499
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=56.85 E-value=3.9 Score=33.22 Aligned_cols=27 Identities=7% Similarity=-0.098 Sum_probs=23.2
Q ss_pred hccCCCCCCCCCCCCcchhhhhCCcEEEEEcC
Q psy12810 116 VTNHTPQSDNQTKHCPPLIVNIVGHSVTVFER 147 (276)
Q Consensus 116 iiG~gp~~~g~~Gl~~A~~l~~~G~~Vtvie~ 147 (276)
+||.|.. |...|..|.+.|++|+++++
T Consensus 5 iIG~G~m-----G~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 5 FIGFGEV-----AQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EESCSHH-----HHHHHHHHHHTTCEEEECCT
T ss_pred EEechHH-----HHHHHHHHHHCCCeEEEeCC
Confidence 4788777 89999999999999998765
No 500
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=56.80 E-value=8 Score=32.23 Aligned_cols=24 Identities=29% Similarity=0.302 Sum_probs=21.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHhhc
Q psy12810 252 AKDKNVIVIGGGDTGCDCIATSLR 275 (276)
Q Consensus 252 ~~~k~vvVIGgG~~G~E~A~~~~r 275 (276)
..++++.|||.|.+|..+|..++.
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~ 178 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAA 178 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCEEEEEcccHHHHHHHHHHHH
Confidence 578999999999999999987764
Done!