Your job contains 1 sequence.
>psy12810
MIWDHQLEKRLDNTLIQECEPVLSGKVPRIDLEYTINNECRAFTATLSYHISIQHLVGHS
VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKVTNHT
PQSDNQTKHCPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEG
IEFKTNINVGKDIAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKK
QMGNENVSPISAKDKNVIVIGGGDTGCDCIATSLRQ
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12810
(276 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036663 - symbol:CG9674 species:7227 "Drosophila m... 538 3.0e-59 2
ASPGD|ASPL0000027159 - symbol:gltA species:162425 "Emeric... 410 6.0e-43 2
TIGR_CMR|CPS_0762 - symbol:CPS_0762 "glutamate synthase, ... 440 1.7e-41 1
POMBASE|SPAPB1E7.07 - symbol:glt1 "glutamate synthase Glt... 394 1.2e-40 2
SGD|S000002330 - symbol:GLT1 "NAD(+)-dependent glutamate ... 379 2.7e-40 2
CGD|CAL0000516 - symbol:GLT1 species:5476 "Candida albica... 377 1.3e-38 2
UNIPROTKB|Q0JKD0 - symbol:LOC_Os01g48960 "Glutamate synth... 392 1.3e-38 2
TAIR|locus:2178461 - symbol:GLT1 "NADH-dependent glutamat... 398 2.2e-38 2
UNIPROTKB|Q9KPJ3 - symbol:VC_2374 "Glutamate synthase, sm... 386 9.2e-36 1
TIGR_CMR|VC_2374 - symbol:VC_2374 "glutamate synthase, sm... 386 9.2e-36 1
UNIPROTKB|P96219 - symbol:gltD "Glutamate synthase [NADPH... 369 5.8e-34 1
UNIPROTKB|Q5HXE8 - symbol:gltD "Glutamate synthase, small... 366 1.2e-33 1
TIGR_CMR|CJE_0008 - symbol:CJE_0008 "glutamate synthase, ... 366 1.2e-33 1
WB|WBGene00012326 - symbol:W07E11.1 species:6239 "Caenorh... 373 1.1e-32 1
TIGR_CMR|SPO_3770 - symbol:SPO_3770 "glutamate synthase, ... 293 1.6e-25 1
UNIPROTKB|Q0C617 - symbol:gltD "Glutamate synthase, small... 291 2.8e-25 1
TIGR_CMR|CPS_4502 - symbol:CPS_4502 "glutamate synthase, ... 288 5.6e-25 1
UNIPROTKB|Q9KPJ0 - symbol:VC_2377 "Glutamate synthase, sm... 270 5.7e-23 1
TIGR_CMR|VC_2377 - symbol:VC_2377 "glutamate synthase, sm... 270 5.7e-23 1
UNIPROTKB|P37127 - symbol:aegA species:83333 "Escherichia... 271 1.2e-22 1
UNIPROTKB|P09832 - symbol:gltD "glutamate synthase, small... 264 2.7e-22 1
UNIPROTKB|Q4KJI5 - symbol:gltD "Glutamate synthase, small... 263 3.4e-22 1
TIGR_CMR|GSU_3057 - symbol:GSU_3057 "glutamate synthase (... 259 9.4e-22 1
TIGR_CMR|SO_1324 - symbol:SO_1324 "glutamate synthase, sm... 257 1.5e-21 1
TIGR_CMR|CHY_1991 - symbol:CHY_1991 "glutamate synthase (... 244 4.1e-20 1
UNIPROTKB|Q46820 - symbol:ygfT "fused predicted oxidoredu... 244 9.5e-20 1
TIGR_CMR|DET_0038 - symbol:DET_0038 "glutamate synthase (... 215 6.3e-17 1
TIGR_CMR|SO_0988 - symbol:SO_0988 "formate dehydrogenase,... 208 2.3e-15 1
UNIPROTKB|Q8Z5A6 - symbol:preT "NAD-dependent dihydropyri... 182 5.5e-12 1
UNIPROTKB|Q74FU5 - symbol:sfrB "NADPH oxidoreductase, bet... 178 4.4e-11 1
TIGR_CMR|GSU_0510 - symbol:GSU_0510 "Fe(III) reductase, b... 178 4.4e-11 1
UNIPROTKB|Q8ZNL8 - symbol:preT "NAD-dependent dihydropyri... 174 5.7e-11 1
POMBASE|SPBC3B8.01c - symbol:arh1 "NADPH-adrenodoxin redu... 166 6.9e-10 1
UNIPROTKB|J3QKZ8 - symbol:FDXR "NADPH:adrenodoxin oxidore... 140 2.8e-09 1
WB|WBGene00013376 - symbol:Y62E10A.6 species:6239 "Caenor... 158 5.9e-09 1
UNIPROTKB|P76440 - symbol:preT "NADH-dependent dihydropyr... 150 4.2e-08 1
UNIPROTKB|F1RV70 - symbol:FDXR "NADPH:adrenodoxin oxidore... 148 1.0e-07 1
WB|WBGene00016103 - symbol:dpyd-1 species:6239 "Caenorhab... 152 1.0e-07 1
UNIPROTKB|Q18164 - symbol:dpyd-1 "Dihydropyrimidine dehyd... 152 1.0e-07 1
UNIPROTKB|Q46811 - symbol:ygfK "predicted oxidoreductase,... 148 2.9e-07 1
RGD|621648 - symbol:Fdxr "ferredoxin reductase" species:1... 144 2.9e-07 1
UNIPROTKB|P56522 - symbol:Fdxr "NADPH:adrenodoxin oxidore... 144 2.9e-07 1
UNIPROTKB|F1N6V9 - symbol:LOC788912 "NADPH:adrenodoxin ox... 143 3.7e-07 1
UNIPROTKB|P08165 - symbol:FDXR "NADPH:adrenodoxin oxidore... 143 3.8e-07 1
MGI|MGI:104724 - symbol:Fdxr "ferredoxin reductase" speci... 142 5.0e-07 1
UNIPROTKB|G3N2Y7 - symbol:LOC788912 "NADPH:adrenodoxin ox... 142 5.0e-07 1
UNIPROTKB|G3V0F2 - symbol:FDXR "NADPH:adrenodoxin oxidore... 140 5.3e-07 1
FB|FBgn0015582 - symbol:dare "defective in the avoidance ... 141 5.8e-07 1
UNIPROTKB|F1NRB1 - symbol:FDXR "NADPH:adrenodoxin oxidore... 141 5.8e-07 1
TAIR|locus:2127811 - symbol:AT4G32360 species:3702 "Arabi... 141 6.2e-07 1
UNIPROTKB|B7Z7G2 - symbol:FDXR "NADPH:adrenodoxin oxidore... 140 6.9e-07 1
UNIPROTKB|J3QQX3 - symbol:FDXR "NADPH:adrenodoxin oxidore... 140 7.6e-07 1
UNIPROTKB|P22570 - symbol:FDXR "NADPH:adrenodoxin oxidore... 140 8.4e-07 1
UNIPROTKB|E7EQC1 - symbol:FDXR "NADPH:adrenodoxin oxidore... 140 9.2e-07 1
TIGR_CMR|SPO_1776 - symbol:SPO_1776 "pyridine nucleotide-... 138 1.2e-06 1
UNIPROTKB|F1N549 - symbol:DPYD "Dihydropyrimidine dehydro... 142 1.4e-06 1
UNIPROTKB|E2RDC3 - symbol:FDXR "NADPH:adrenodoxin oxidore... 136 2.4e-06 1
UNIPROTKB|Q28007 - symbol:DPYD "Dihydropyrimidine dehydro... 139 3.0e-06 1
FB|FBgn0086450 - symbol:su(r) "suppressor of rudimentary"... 138 3.9e-06 1
DICTYBASE|DDB_G0267966 - symbol:pyd1 "dihydropyrimidine d... 137 5.0e-06 1
ZFIN|ZDB-GENE-040426-2459 - symbol:dpydb "dihydropyrimidi... 137 5.1e-06 1
UNIPROTKB|E1C4J1 - symbol:DPYD "Uncharacterized protein" ... 136 6.0e-06 1
UNIPROTKB|E1BRA0 - symbol:DPYD "Uncharacterized protein" ... 136 6.0e-06 1
UNIPROTKB|F1S550 - symbol:DPYD "Dihydropyrimidine dehydro... 135 7.8e-06 1
UNIPROTKB|Q28943 - symbol:DPYD "Dihydropyrimidine dehydro... 135 8.6e-06 1
UNIPROTKB|F1M412 - symbol:F1M412 "Uncharacterized protein... 134 1.0e-05 1
RGD|621218 - symbol:Dpyd "dihydropyrimidine dehydrogenase... 134 1.1e-05 1
UNIPROTKB|O89000 - symbol:Dpyd "Dihydropyrimidine dehydro... 134 1.1e-05 1
MGI|MGI:2139667 - symbol:Dpyd "dihydropyrimidine dehydrog... 133 1.4e-05 1
DICTYBASE|DDB_G0287353 - symbol:fdxr "adrenodoxin reducta... 128 2.1e-05 1
UNIPROTKB|O05783 - symbol:fprA "NADPH-ferredoxin reductas... 124 4.9e-05 1
TIGR_CMR|DET_0866 - symbol:DET_0866 "hydrogenase subunit,... 124 5.0e-05 1
TIGR_CMR|DET_0123 - symbol:DET_0123 "pyridine nucleotide-... 125 6.3e-05 1
UNIPROTKB|Q12882 - symbol:DPYD "Dihydropyrimidine dehydro... 127 6.8e-05 1
UNIPROTKB|Q5R895 - symbol:DPYD "Dihydropyrimidine dehydro... 127 6.8e-05 1
UNIPROTKB|B4DX24 - symbol:FDXR "NADPH:adrenodoxin oxidore... 123 7.0e-05 1
UNIPROTKB|P65528 - symbol:fprB "Probable ferredoxin/ferre... 117 0.00043 1
TIGR_CMR|SPO_3586 - symbol:SPO_3586 "2,4-dienoyl-CoA redu... 117 0.00053 1
>FB|FBgn0036663 [details] [associations]
symbol:CG9674 species:7227 "Drosophila melanogaster"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0016040 "glutamate synthase
(NADH) activity" evidence=IEA] [GO:0010181 "FMN binding"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 InterPro:IPR016040 EMBL:AE014296
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660
GO:GO:0051536 GO:GO:0006537 Gene3D:1.10.1060.10 GO:GO:0004355
GO:GO:0010181 InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
GeneTree:ENSGT00500000044896 Gene3D:2.160.20.60 SUPFAM:SSF69336
KO:K00264 GO:GO:0016040 TIGRFAMs:TIGR01317 HSSP:P55038
UniGene:Dm.11253 GeneID:39878 KEGG:dme:Dmel_CG9674
FlyBase:FBgn0036663 ChiTaRS:CG9674 GenomeRNAi:39878 NextBio:815851
EMBL:AY094734 RefSeq:NP_648922.1 RefSeq:NP_788517.1 IntAct:Q9VVA4
MINT:MINT-312597 STRING:Q9VVA4 EnsemblMetazoa:FBtr0075341
EnsemblMetazoa:FBtr0075344 UCSC:CG9674-RA InParanoid:Q9VVA4
Uniprot:Q9VVA4
Length = 2114
Score = 538 (194.4 bits), Expect = 3.0e-59, Sum P(2) = 3.0e-59
Identities = 103/142 (72%), Positives = 122/142 (85%)
Query: 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 194
+N GH VTVFERNDRVGGLLQYGIPTMKLSKEVV+RRV L+A EGIEF+TN++VGKD+
Sbjct: 1785 LNRAGHFVTVFERNDRVGGLLQYGIPTMKLSKEVVKRRVDLMADEGIEFRTNVHVGKDLK 1844
Query: 195 AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKD 254
A++L +E+DA+LL TG+TWPRDLP+ R L GI+FAM FLE+ QKKQ+G +N ISA
Sbjct: 1845 AEQLLQEYDAVLLTTGSTWPRDLPLANRDLKGIHFAMEFLEAQQKKQLGGKN-DIISAAG 1903
Query: 255 KNVIVIGGGDTGCDCIATSLRQ 276
KNVI+IGGGDTGCDCIATSLRQ
Sbjct: 1904 KNVIIIGGGDTGCDCIATSLRQ 1925
Score = 244 (91.0 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 47/58 (81%), Positives = 54/58 (93%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAK 115
GH VTVFERNDRVGGLLQYGIPTMKLSKEVV+RRV L+A EGIEF+TN++VGKD+ A+
Sbjct: 1789 GHFVTVFERNDRVGGLLQYGIPTMKLSKEVVKRRVDLMADEGIEFRTNVHVGKDLKAE 1846
Score = 118 (46.6 bits), Expect = 3.0e-59, Sum P(2) = 3.0e-59
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 4 DHQLEKRLDNTLIQECEPVLSGKVPRIDLEYTINNECRAFTATLSYHISIQH 55
D QLEKR DN LI + + + SG + ++ I+NE RAF +TLSYHI+ ++
Sbjct: 1307 DFQLEKRSDNELIAKAQQIFSGADDNVTVKMRIHNEERAFGSTLSYHIACKY 1358
>ASPGD|ASPL0000027159 [details] [associations]
symbol:gltA species:162425 "Emericella nidulans"
[GO:0016040 "glutamate synthase (NADH) activity"
evidence=ISA;RCA;IMP] [GO:0009064 "glutamine family amino acid
metabolic process" evidence=IGI;RCA;IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 GO:GO:0005739 Gene3D:3.20.20.70
GO:GO:0005506 GO:GO:0050660 GO:GO:0051536 EMBL:BN001305
GO:GO:0006537 Gene3D:1.10.1060.10 GO:GO:0019676 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
Gene3D:2.160.20.60 SUPFAM:SSF69336 GO:GO:0016040 TIGRFAMs:TIGR01317
OMA:WMAARQA ProteinModelPortal:C8VEZ6 EnsemblFungi:CADANIAT00003118
Uniprot:C8VEZ6
Length = 2126
Score = 410 (149.4 bits), Expect = 6.0e-43, Sum P(2) = 6.0e-43
Identities = 83/145 (57%), Positives = 109/145 (75%)
Query: 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD-- 192
+N VGHSVTV+ER DR+GGLL YGIP MKL K++VQRRV L+AAEG++F T ++VG D
Sbjct: 1776 LNRVGHSVTVYERADRIGGLLMYGIPNMKLDKKIVQRRVDLMAAEGVKFVTGVSVGPDSE 1835
Query: 193 IAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNE--NVSPI 250
++ L + DA+++ TGAT RDL +PGR+L GI+FAM FL K + +E + + I
Sbjct: 1836 VSLDSLRKSNDAVIIATGATVARDLKVPGRELEGIHFAMQFLHKNTKSLLDSELADGAYI 1895
Query: 251 SAKDKNVIVIGGGDTGCDCIATSLR 275
SAKDK+V+VIGGGDTG DCI TS+R
Sbjct: 1896 SAKDKHVVVIGGGDTGNDCIGTSVR 1920
Score = 206 (77.6 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 38/55 (69%), Positives = 47/55 (85%)
Query: 57 VGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD 111
VGHSVTV+ER DR+GGLL YGIP MKL K++VQRRV L+AAEG++F T ++VG D
Sbjct: 1779 VGHSVTVYERADRIGGLLMYGIPNMKLDKKIVQRRVDLMAAEGVKFVTGVSVGPD 1833
Score = 92 (37.4 bits), Expect = 6.0e-43, Sum P(2) = 6.0e-43
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 4 DHQLEKRLDNTLIQECEPVLSGKVP-RIDLEYTINNECRAFTATLSYHIS 52
DH+L RLDN LI E E L +P R++ + +N + RA ATLSY +S
Sbjct: 1289 DHRLHTRLDNKLIAESELALEKGLPCRVECD-VVNTD-RALGATLSYQVS 1336
>TIGR_CMR|CPS_0762 [details] [associations]
symbol:CPS_0762 "glutamate synthase, NADH/NADPH, small
subunit" species:167879 "Colwellia psychrerythraea 34H" [GO:0006537
"glutamate biosynthetic process" evidence=ISS] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=ISS]
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0051536
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006537
eggNOG:COG0493 GO:GO:0016639 Gene3D:1.10.1060.10 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810
HOGENOM:HOG000031443 RefSeq:YP_267511.1 ProteinModelPortal:Q488K3
STRING:Q488K3 GeneID:3520782 KEGG:cps:CPS_0762 PATRIC:21464835
OMA:WAEGWVK BioCyc:CPSY167879:GI48-848-MONOMER Uniprot:Q488K3
Length = 496
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/143 (59%), Positives = 110/143 (76%)
Query: 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 194
+N GH VTV+ER DR+GGLL YGIP MKL KE+VQRRV +LA EGI F TN VGKD++
Sbjct: 172 LNKAGHMVTVYERADRIGGLLMYGIPNMKLQKELVQRRVDILAEEGIVFVTNTEVGKDVS 231
Query: 195 AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSP--ISA 252
++L +FDA++LC GAT PRDLP+ GR+L+G++FAM FL++ K + +E+ I+A
Sbjct: 232 VEKLESDFDAIVLCIGATVPRDLPVEGRELNGVHFAMDFLKANTKSLLDSEHKDGQYINA 291
Query: 253 KDKNVIVIGGGDTGCDCIATSLR 275
+ KNV+VIGGGDTG DCI TSLR
Sbjct: 292 QGKNVVVIGGGDTGTDCIGTSLR 314
Score = 204 (76.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 39/58 (67%), Positives = 46/58 (79%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAK 115
GH VTV+ER DR+GGLL YGIP MKL KE+VQRRV +LA EGI F TN VGKD++ +
Sbjct: 176 GHMVTVYERADRIGGLLMYGIPNMKLQKELVQRRVDILAEEGIVFVTNTEVGKDVSVE 233
>POMBASE|SPAPB1E7.07 [details] [associations]
symbol:glt1 "glutamate synthase Glt1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=IEA] [GO:0005506 "iron ion
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006537 "glutamate
biosynthetic process" evidence=ISO] [GO:0006541 "glutamine
metabolic process" evidence=IEA] [GO:0010181 "FMN binding"
evidence=IEA] [GO:0016040 "glutamate synthase (NADH) activity"
evidence=ISO] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 UniPathway:UPA00045
UniPathway:UPA00634 PomBase:SPAPB1E7.07 GO:GO:0005829 GO:GO:0005739
EMBL:CU329670 Gene3D:3.20.20.70 GO:GO:0005506 GO:GO:0050660
GO:GO:0051538 GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10
GO:GO:0004355 GO:GO:0010181 GO:GO:0006541 InterPro:IPR017932
PROSITE:PS51278 SUPFAM:SSF46548 Gene3D:2.160.20.60 SUPFAM:SSF69336
KO:K00264 GO:GO:0016040 TIGRFAMs:TIGR01317 EMBL:D89165 PIR:T42527
RefSeq:NP_594133.1 ProteinModelPortal:Q9C102 STRING:Q9C102
PRIDE:Q9C102 EnsemblFungi:SPAPB1E7.07.1 GeneID:2543509
KEGG:spo:SPAPB1E7.07 HOGENOM:HOG000031559 OMA:PPAWQSN
OrthoDB:EOG444PTC NextBio:20804519 Uniprot:Q9C102
Length = 2111
Score = 394 (143.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 80/145 (55%), Positives = 106/145 (73%)
Query: 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK--D 192
+N GH V ++ER DR GGLLQYGIP MKL K+VV+RR++L+ EGIE TN+ VGK D
Sbjct: 1774 LNRAGHHVVIYERADRPGGLLQYGIPNMKLDKKVVERRIQLMIDEGIEVLTNVEVGKNGD 1833
Query: 193 IAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNE--NVSPI 250
++ EL++ +DA++L +G+T PRDLPIP R GI+FAM FL K + +E + + I
Sbjct: 1834 VSLDELHKVYDAVVLASGSTVPRDLPIPNRDSKGIHFAMEFLHKNTKSLLDSELKDGNYI 1893
Query: 251 SAKDKNVIVIGGGDTGCDCIATSLR 275
SAK K+VIVIGGGDTG DC+ TS+R
Sbjct: 1894 SAKGKDVIVIGGGDTGNDCLGTSVR 1918
Score = 183 (69.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD 111
GH V ++ER DR GGLLQYGIP MKL K+VV+RR++L+ EGIE TN+ VGK+
Sbjct: 1778 GHHVVIYERADRPGGLLQYGIPNMKLDKKVVERRIQLMIDEGIEVLTNVEVGKN 1831
Score = 86 (35.3 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 4 DHQLEKRLDNTLIQECEPVLSGKVPRIDLEYTINNECRAFTATLSYHIS 52
DH+L RLDN LI E E L +P + +E I N R ATLS IS
Sbjct: 1296 DHRLYTRLDNKLIDEAEVTLEEGIPSV-VECEIINTDRTLGATLSNKIS 1343
>SGD|S000002330 [details] [associations]
symbol:GLT1 "NAD(+)-dependent glutamate synthase (GOGAT)"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0006541 "glutamine metabolic process"
evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0015930
"glutamate synthase activity" evidence=IEA] [GO:0016639
"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0045181 "glutamate synthase
activity, NAD(P)H as acceptor" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA;IEP] [GO:0006807 "nitrogen compound metabolic process"
evidence=IEA] [GO:0016040 "glutamate synthase (NADH) activity"
evidence=IEA;IMP;IDA] [GO:0019676 "ammonia assimilation cycle"
evidence=IEP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0097054 "L-glutamate biosynthetic process" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051538 "3 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0016638 "oxidoreductase activity, acting
on the CH-NH2 group of donors" evidence=IEA] InterPro:IPR000583
InterPro:IPR001327 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006005 InterPro:IPR006982 InterPro:IPR009051
InterPro:IPR012220 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR023753 Pfam:PF00070 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187
UniPathway:UPA00045 UniPathway:UPA00634 InterPro:IPR016040
SGD:S000002330 GO:GO:0005739 Gene3D:3.20.20.70 Gene3D:3.40.50.720
GO:GO:0005506 GO:GO:0050660 EMBL:BK006938 GO:GO:0051538
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 EMBL:Z67750
GO:GO:0019676 GO:GO:0010181 InterPro:IPR017932 PROSITE:PS51278
SUPFAM:SSF46548 GeneTree:ENSGT00500000044896 Gene3D:2.160.20.60
SUPFAM:SSF69336 KO:K00264 GO:GO:0016040 GO:GO:0097054
TIGRFAMs:TIGR01317 HOGENOM:HOG000031559 OrthoDB:EOG444PTC
EMBL:X89221 EMBL:Z74219 PIR:S61041 RefSeq:NP_010110.1
ProteinModelPortal:Q12680 SMR:Q12680 DIP:DIP-6490N IntAct:Q12680
MINT:MINT-647261 STRING:Q12680 PaxDb:Q12680 PeptideAtlas:Q12680
PRIDE:Q12680 EnsemblFungi:YDL171C GeneID:851383 KEGG:sce:YDL171C
CYGD:YDL171c OMA:WMAARQA BioCyc:MetaCyc:MONOMER-13146
SABIO-RK:Q12680 NextBio:968525 Genevestigator:Q12680
GermOnline:YDL171C Uniprot:Q12680
Length = 2145
Score = 379 (138.5 bits), Expect = 2.7e-40, Sum P(2) = 2.7e-40
Identities = 78/144 (54%), Positives = 102/144 (70%)
Query: 134 IVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI 193
++N GH+VTV+ER+DR GGLL YGIP MKL K +VQRR+ LL+AEGI+F TN +GK I
Sbjct: 1800 MLNRAGHTVTVYERSDRCGGLLMYGIPNMKLDKAIVQRRIDLLSAEGIDFVTNTEIGKTI 1859
Query: 194 AAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAK 253
+ EL + +A++ G+T PRDLPI GR+L I FAM LES K + N+++ I K
Sbjct: 1860 SMDELKNKHNAVVYAIGSTIPRDLPIKGRELKNIDFAMQLLES-NTKALLNKDLEIIREK 1918
Query: 254 --DKNVIVIGGGDTGCDCIATSLR 275
K VIV+GGGDTG DC+ TS+R
Sbjct: 1919 IQGKKVIVVGGGDTGNDCLGTSVR 1942
Score = 200 (75.5 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 113
GH+VTV+ER+DR GGLL YGIP MKL K +VQRR+ LL+AEGI+F TN +GK I+
Sbjct: 1805 GHTVTVYERSDRCGGLLMYGIPNMKLDKAIVQRRIDLLSAEGIDFVTNTEIGKTIS 1860
Score = 98 (39.6 bits), Expect = 2.7e-40, Sum P(2) = 2.7e-40
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 4 DHQLEKRLDNTLIQECEPVLSGKVPRIDLEYTINNECRAFTATLSYHIS 52
DH+L RLDN LI E E L +P ++++ +I N RA +TLSY +S
Sbjct: 1289 DHKLHTRLDNKLIDEAEVTLDRGLP-VNIDASIINTDRALGSTLSYRVS 1336
Score = 48 (22.0 bits), Expect = 4.8e-35, Sum P(2) = 4.8e-35
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 30 IDLEYTINNECRAFTATLSYHISIQHLVGHSVTVFERND 68
I+ Y + + R A L + +I +VGHS + +R+D
Sbjct: 1219 INFFYYLIQDLRQIMAKLGFR-TIDEMVGHSEKLKKRDD 1256
Score = 40 (19.1 bits), Expect = 3.3e-34, Sum P(2) = 3.3e-34
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 11 LDNTLIQECEPVLSGKVPRIDLEYTINNECRAFTATLSYHISIQHLVGHSVTVFERND-- 68
LDN+++ C S ++ + EY + AF+ + S Q + SV + E +
Sbjct: 806 LDNSIVDLCFTGTSSRIRGVTFEYLAQD---AFSLHERGYPSRQ-TISKSVNLPESGEYH 861
Query: 69 -RVGGLLQYGIPT 80
R GG PT
Sbjct: 862 FRDGGYKHVNEPT 874
>CGD|CAL0000516 [details] [associations]
symbol:GLT1 species:5476 "Candida albicans" [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006807 "nitrogen compound metabolic process" evidence=IEA]
InterPro:IPR000583 InterPro:IPR001327 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006005 InterPro:IPR006982
InterPro:IPR009051 InterPro:IPR012220 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR023753 Pfam:PF00070 Pfam:PF00310
Pfam:PF01493 Pfam:PF01645 Pfam:PF04898 Pfam:PF07992
PIRSF:PIRSF000187 InterPro:IPR016040 Gene3D:3.20.20.70
Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660 GO:GO:0051536
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 EMBL:AACQ01000038
SUPFAM:SSF46548 Gene3D:2.160.20.60 SUPFAM:SSF69336 KO:K00264
GO:GO:0016040 TIGRFAMs:TIGR01317 RefSeq:XP_718760.1
ProteinModelPortal:Q5AAQ5 STRING:Q5AAQ5 GeneID:3639651
KEGG:cal:CaO19.13636 CGD:CAL0069988 Uniprot:Q5AAQ5
Length = 2126
Score = 377 (137.8 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 79/143 (55%), Positives = 97/143 (67%)
Query: 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 194
+N GH VTV+ER+DR GGLL YGIP MKL K +V+RR LLAAEGIEF N VG+DI
Sbjct: 1785 LNKAGHLVTVYERSDRPGGLLMYGIPNMKLDKGIVKRRTDLLAAEGIEFICNTTVGEDIT 1844
Query: 195 AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPI--SA 252
EL +FDA++ G+T PRDL IPGR+L I FAM L S K + ++ + I +
Sbjct: 1845 VSELKSQFDAVVFAVGSTIPRDLRIPGRELKNINFAMQLLHS-NTKALLDDQLEDIRKNL 1903
Query: 253 KDKNVIVIGGGDTGCDCIATSLR 275
KNV+VIGGGDTG DC+ TS R
Sbjct: 1904 AGKNVVVIGGGDTGNDCLGTSTR 1926
Score = 190 (71.9 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 38/55 (69%), Positives = 43/55 (78%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI 112
GH VTV+ER+DR GGLL YGIP MKL K +V+RR LLAAEGIEF N VG+DI
Sbjct: 1789 GHLVTVYERSDRPGGLLMYGIPNMKLDKGIVKRRTDLLAAEGIEFICNTTVGEDI 1843
Score = 84 (34.6 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 4 DHQLEKRLDNTLIQECEPVLSGKVP-RIDLEYTINNECRAFTATLSYHIS 52
DH+L R+DN LI E E L+ +P ID E +N + R+ TLSY +S
Sbjct: 1285 DHKLHIRVDNKLIDESELTLAKGLPVTIDCE-VVNTD-RSLGTTLSYRVS 1332
Score = 39 (18.8 bits), Expect = 6.7e-34, Sum P(2) = 6.7e-34
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 11 LDNTLIQECEPVLSGKVPRIDLEYTINNECRAFT 44
+DN++I C + ++ + EY + AFT
Sbjct: 802 IDNSVIDRCFAGTASRIKGVTFEYIAQD---AFT 832
>UNIPROTKB|Q0JKD0 [details] [associations]
symbol:LOC_Os01g48960 "Glutamate synthase 1 [NADH],
chloroplastic" species:39947 "Oryza sativa Japonica Group"
[GO:0006537 "glutamate biosynthetic process" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] [GO:0019676 "ammonia
assimilation cycle" evidence=IMP] [GO:0048589 "developmental
growth" evidence=IMP] [GO:0060359 "response to ammonium ion"
evidence=IEP] InterPro:IPR000583 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006005 InterPro:IPR006982
InterPro:IPR009051 InterPro:IPR012220 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR023753 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187
UniPathway:UPA00045 UniPathway:UPA00634 GO:GO:0009507 GO:GO:0009536
Gene3D:3.20.20.70 GO:GO:0005506 GO:GO:0050660 GO:GO:0051538
GO:GO:0006537 GO:GO:0048589 eggNOG:COG0493 Gene3D:1.10.1060.10
EMBL:AP008207 GO:GO:0019676 GO:GO:0010181 InterPro:IPR017932
PROSITE:PS51278 GO:GO:0060359 SUPFAM:SSF46548 Gene3D:2.160.20.60
SUPFAM:SSF69336 EMBL:AB008845 RefSeq:NP_001043884.1
UniGene:Os.12738 ProteinModelPortal:Q0JKD0 STRING:Q0JKD0
PRIDE:Q0JKD0 GeneID:4324398 KEGG:osa:4324398 Gramene:Q0JKD0
KO:K00264 OMA:IEKHIAY ProtClustDB:CLSN2683760 GO:GO:0016040
GO:GO:0097054 TIGRFAMs:TIGR01317 Uniprot:Q0JKD0
Length = 2167
Score = 392 (143.0 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 83/146 (56%), Positives = 103/146 (70%)
Query: 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSK-EVVQRRVKLLAAEGIEFKTNINVGKD- 192
+N +GH VTVFER DR+GGL+ YG+P MK K E+VQRRV L+A EGI F N NVG D
Sbjct: 1825 LNKMGHFVTVFERADRIGGLMMYGVPNMKTDKIEIVQRRVNLMAEEGITFVVNANVGSDP 1884
Query: 193 -IAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGN--ENVSP 249
+ + L E DA++L GAT PRDL IPGR+LSG++FAM FL + K + + E+
Sbjct: 1885 LYSIERLRSENDAVILACGATKPRDLGIPGRELSGVHFAMEFLHANTKSLLDSNLEDGRY 1944
Query: 250 ISAKDKNVIVIGGGDTGCDCIATSLR 275
ISAK K V+VIGGGDTG DCI TS+R
Sbjct: 1945 ISAKGKKVVVIGGGDTGTDCIGTSIR 1970
Score = 185 (70.2 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 36/56 (64%), Positives = 42/56 (75%)
Query: 57 VGHSVTVFERNDRVGGLLQYGIPTMKLSK-EVVQRRVKLLAAEGIEFKTNINVGKD 111
+GH VTVFER DR+GGL+ YG+P MK K E+VQRRV L+A EGI F N NVG D
Sbjct: 1828 MGHFVTVFERADRIGGLMMYGVPNMKTDKIEIVQRRVNLMAEEGITFVVNANVGSD 1883
Score = 69 (29.3 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 4 DHQLEKRLDNTLIQECEPVLSGKVPRIDLEYTINNECRAFTATLSYHISIQ-HLVG 58
DH L+ LDN LI + L +V R+ +E I N RA LS+ ++ + H+ G
Sbjct: 1352 DHGLDMALDNKLIALSKAALEKEV-RVFIETPIQNTNRAVGTMLSHEVTKRYHMKG 1406
>TAIR|locus:2178461 [details] [associations]
symbol:GLT1 "NADH-dependent glutamate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA;IDA;IMP] [GO:0006807 "nitrogen
compound metabolic process" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA]
[GO:0015930 "glutamate synthase activity" evidence=IEA] [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA;IDA;IMP]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016638
"oxidoreductase activity, acting on the CH-NH2 group of donors"
evidence=IEA] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0042128 "nitrate assimilation" evidence=TAS] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0019676 "ammonia
assimilation cycle" evidence=IMP] [GO:0048589 "developmental
growth" evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009536 "plastid" evidence=TAS]
InterPro:IPR000583 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006005 InterPro:IPR006982 InterPro:IPR009051
InterPro:IPR012220 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR023753 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187 UniPathway:UPA00045
UniPathway:UPA00634 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046686 GO:GO:0009570
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660
EMBL:AB020754 GO:GO:0051538 GO:GO:0006537 GO:GO:0048589
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019676 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
Gene3D:2.160.20.60 SUPFAM:SSF69336 KO:K00264
ProtClustDB:CLSN2683760 GO:GO:0016040 GO:GO:0097054
TIGRFAMs:TIGR01317 HOGENOM:HOG000031559 OMA:WMAARQA HSSP:P55038
EMBL:AY099795 EMBL:AK222185 EMBL:AK230382 IPI:IPI00521970
RefSeq:NP_001190529.1 RefSeq:NP_001190530.1 RefSeq:NP_200158.2
UniGene:At.67093 UniGene:At.8951 ProteinModelPortal:Q9LV03
SMR:Q9LV03 STRING:Q9LV03 PaxDb:Q9LV03 PRIDE:Q9LV03
EnsemblPlants:AT5G53460.1 EnsemblPlants:AT5G53460.2
EnsemblPlants:AT5G53460.3 GeneID:835427 KEGG:ath:AT5G53460
TAIR:At5g53460 InParanoid:Q9LV03 PhylomeDB:Q9LV03 BRENDA:1.4.1.14
Genevestigator:Q9LV03 Uniprot:Q9LV03
Length = 2208
Score = 398 (145.2 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 81/146 (55%), Positives = 105/146 (71%)
Query: 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSK-EVVQRRVKLLAAEGIEFKTNINVGKD- 192
+N +GH VTV+ER+DR+GGL+ YG+P MK K +VVQRRV L+ EGI F N N+GKD
Sbjct: 1864 LNKMGHLVTVYERSDRIGGLMMYGVPNMKTDKIDVVQRRVDLMTKEGINFVVNANIGKDP 1923
Query: 193 -IAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQM--GNENVSP 249
+ L EE DA++L G+T PRDLP+PGR LSG++FAM FL + K + +E+ +
Sbjct: 1924 SYSLDGLKEENDAIVLAVGSTKPRDLPVPGRDLSGVHFAMEFLHANTKSLLDSNHEDGNY 1983
Query: 250 ISAKDKNVIVIGGGDTGCDCIATSLR 275
ISAK K V+VIGGGDTG DCI TS+R
Sbjct: 1984 ISAKGKKVVVIGGGDTGTDCIGTSIR 2009
Score = 183 (69.5 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 57 VGHSVTVFERNDRVGGLLQYGIPTMKLSK-EVVQRRVKLLAAEGIEFKTNINVGKD 111
+GH VTV+ER+DR+GGL+ YG+P MK K +VVQRRV L+ EGI F N N+GKD
Sbjct: 1867 MGHLVTVYERSDRIGGLMMYGVPNMKTDKIDVVQRRVDLMTKEGINFVVNANIGKD 1922
Score = 61 (26.5 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 4 DHQLEKRLDNTLIQECEPVLSGKVPRIDLEYTINNECRAFTATLSYHISIQ-HLVG 58
DH L+ LD LI + L +P + +E I N RA LS+ ++ + HL G
Sbjct: 1371 DHGLDMALDQELIALSKSALEKSLP-VYIETPICNVNRAVGTMLSHEVTKRYHLTG 1425
>UNIPROTKB|Q9KPJ3 [details] [associations]
symbol:VC_2374 "Glutamate synthase, small subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF07992 PROSITE:PS51379
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 GO:GO:0004355 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810 OMA:WAEGWVK
PIR:F82085 RefSeq:NP_232004.1 ProteinModelPortal:Q9KPJ3
DNASU:2613043 GeneID:2613043 KEGG:vch:VC2374 PATRIC:20083773
Uniprot:Q9KPJ3
Length = 489
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 74/142 (52%), Positives = 101/142 (71%)
Query: 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 194
+N GHSVTVFER+++VGGLL++GIP KL +V+ R++ L+ G++F N ++G DI
Sbjct: 163 LNAAGHSVTVFERDEKVGGLLRFGIPDFKLGMDVIDRKINLMEQAGVKFVVNAHIGVDIN 222
Query: 195 AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNE-NVSPISAK 253
A++L +EFDA+LL G+T PRDL IPGR L G+YFAM FL ++ G + I AK
Sbjct: 223 AQQLRQEFDAVLLTGGSTVPRDLSIPGRDLKGVYFAMQFLAQNNRRANGMDLKGEEIHAK 282
Query: 254 DKNVIVIGGGDTGCDCIATSLR 275
K+V+VIGGGDTG DC+ TS R
Sbjct: 283 GKHVVVIGGGDTGSDCVGTSNR 304
Score = 166 (63.5 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 29/58 (50%), Positives = 44/58 (75%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAK 115
GHSVTVFER+++VGGLL++GIP KL +V+ R++ L+ G++F N ++G DI A+
Sbjct: 167 GHSVTVFERDEKVGGLLRFGIPDFKLGMDVIDRKINLMEQAGVKFVVNAHIGVDINAQ 224
>TIGR_CMR|VC_2374 [details] [associations]
symbol:VC_2374 "glutamate synthase, small subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006005
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR023753 Pfam:PF07992 PROSITE:PS51379 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 GO:GO:0004355 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810 OMA:WAEGWVK
PIR:F82085 RefSeq:NP_232004.1 ProteinModelPortal:Q9KPJ3
DNASU:2613043 GeneID:2613043 KEGG:vch:VC2374 PATRIC:20083773
Uniprot:Q9KPJ3
Length = 489
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 74/142 (52%), Positives = 101/142 (71%)
Query: 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 194
+N GHSVTVFER+++VGGLL++GIP KL +V+ R++ L+ G++F N ++G DI
Sbjct: 163 LNAAGHSVTVFERDEKVGGLLRFGIPDFKLGMDVIDRKINLMEQAGVKFVVNAHIGVDIN 222
Query: 195 AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNE-NVSPISAK 253
A++L +EFDA+LL G+T PRDL IPGR L G+YFAM FL ++ G + I AK
Sbjct: 223 AQQLRQEFDAVLLTGGSTVPRDLSIPGRDLKGVYFAMQFLAQNNRRANGMDLKGEEIHAK 282
Query: 254 DKNVIVIGGGDTGCDCIATSLR 275
K+V+VIGGGDTG DC+ TS R
Sbjct: 283 GKHVVVIGGGDTGSDCVGTSNR 304
Score = 166 (63.5 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 29/58 (50%), Positives = 44/58 (75%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAK 115
GHSVTVFER+++VGGLL++GIP KL +V+ R++ L+ G++F N ++G DI A+
Sbjct: 167 GHSVTVFERDEKVGGLLRFGIPDFKLGMDVIDRKINLMEQAGVKFVVNAHIGVDINAQ 224
>UNIPROTKB|P96219 [details] [associations]
symbol:gltD "Glutamate synthase [NADPH] small chain"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR001327
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PROSITE:PS51379
UniPathway:UPA00634 InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0046872 EMBL:BX842584 GO:GO:0051539 Gene3D:1.10.1060.10
GO:GO:0004355 SUPFAM:SSF46548 GO:GO:0097054 TIGRFAMs:TIGR01317
KO:K00266 ProtClustDB:PRK12810 PIR:G70655 RefSeq:NP_218375.1
RefSeq:NP_338527.1 RefSeq:YP_006517358.1 HSSP:Q39243
ProteinModelPortal:P96219 SMR:P96219 PRIDE:P96219
EnsemblBacteria:EBMYCT00000002545 EnsemblBacteria:EBMYCT00000069396
GeneID:13317485 GeneID:886196 GeneID:922550 KEGG:mtc:MT3973
KEGG:mtu:Rv3858c KEGG:mtv:RVBD_3858c PATRIC:18130493
TubercuList:Rv3858c HOGENOM:HOG000031443 OMA:QIMPKEP Uniprot:P96219
Length = 488
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 73/143 (51%), Positives = 101/143 (70%)
Query: 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKEL 198
GH+VTVFER DR+GGLL+YGIP K+ K + RR+ + +EG EF+ +NVG DI+A++L
Sbjct: 167 GHTVTVFEREDRIGGLLRYGIPEFKMEKRHLDRRLDQMRSEGTEFRPGVNVGVDISAEKL 226
Query: 199 YEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVS-----PISAK 253
+FDA++L GAT R+LPIPGR+L G++ AM FL + Q G++ + PI+AK
Sbjct: 227 RADFDAVVLAGGATAWRELPIPGRELEGVHQAMEFLPWANRVQEGDDVLDEDGQPPITAK 286
Query: 254 DKNVIVIGGGDTGCDCIATSLRQ 276
K V++IGGGDTG DC+ T RQ
Sbjct: 287 GKKVVIIGGGDTGADCLGTVHRQ 309
Score = 177 (67.4 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAK 115
GH+VTVFER DR+GGLL+YGIP K+ K + RR+ + +EG EF+ +NVG DI+A+
Sbjct: 167 GHTVTVFEREDRIGGLLRYGIPEFKMEKRHLDRRLDQMRSEGTEFRPGVNVGVDISAE 224
>UNIPROTKB|Q5HXE8 [details] [associations]
symbol:gltD "Glutamate synthase, small subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 GO:GO:0050660
GO:GO:0051536 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0006537
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0004355 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810
HOGENOM:HOG000031443 OMA:WAEGWVK RefSeq:YP_178037.1
ProteinModelPortal:Q5HXE8 STRING:Q5HXE8 GeneID:3230664
KEGG:cjr:CJE0008 PATRIC:20041705 BioCyc:CJEJ195099:GJC0-8-MONOMER
Uniprot:Q5HXE8
Length = 481
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 75/142 (52%), Positives = 95/142 (66%)
Query: 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 194
+N +G+ V+VFER+D++GGLL YGIP MKL K +VQRRV LL GIEFK N N+
Sbjct: 171 LNSLGYKVSVFERSDKIGGLLMYGIPDMKLDKSIVQRRVDLLKKSGIEFKVNENIDSRDK 230
Query: 195 AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKD 254
+L +EFDAL+LCTGA+ P DL I GR+L G+ FA+ FL K + +AK
Sbjct: 231 VSKLLKEFDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQ-NTKTLLKTGKGADTAKG 289
Query: 255 KNVIVIGGGDTGCDCIATSLRQ 276
KNV+VIG GDT DCIA + RQ
Sbjct: 290 KNVLVIGSGDTSVDCIAVATRQ 311
Score = 180 (68.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 35/61 (57%), Positives = 46/61 (75%)
Query: 57 VGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV-GKDIAAK 115
+G+ V+VFER+D++GGLL YGIP MKL K +VQRRV LL GIEFK N N+ +D +K
Sbjct: 174 LGYKVSVFERSDKIGGLLMYGIPDMKLDKSIVQRRVDLLKKSGIEFKVNENIDSRDKVSK 233
Query: 116 V 116
+
Sbjct: 234 L 234
>TIGR_CMR|CJE_0008 [details] [associations]
symbol:CJE_0008 "glutamate synthase, small subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006005 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 GO:GO:0050660
GO:GO:0051536 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0006537
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0004355 SUPFAM:SSF46548
TIGRFAMs:TIGR01317 KO:K00266 ProtClustDB:PRK12810
HOGENOM:HOG000031443 OMA:WAEGWVK RefSeq:YP_178037.1
ProteinModelPortal:Q5HXE8 STRING:Q5HXE8 GeneID:3230664
KEGG:cjr:CJE0008 PATRIC:20041705 BioCyc:CJEJ195099:GJC0-8-MONOMER
Uniprot:Q5HXE8
Length = 481
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 75/142 (52%), Positives = 95/142 (66%)
Query: 135 VNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 194
+N +G+ V+VFER+D++GGLL YGIP MKL K +VQRRV LL GIEFK N N+
Sbjct: 171 LNSLGYKVSVFERSDKIGGLLMYGIPDMKLDKSIVQRRVDLLKKSGIEFKVNENIDSRDK 230
Query: 195 AKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKD 254
+L +EFDAL+LCTGA+ P DL I GR+L G+ FA+ FL K + +AK
Sbjct: 231 VSKLLKEFDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQ-NTKTLLKTGKGADTAKG 289
Query: 255 KNVIVIGGGDTGCDCIATSLRQ 276
KNV+VIG GDT DCIA + RQ
Sbjct: 290 KNVLVIGSGDTSVDCIAVATRQ 311
Score = 180 (68.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 35/61 (57%), Positives = 46/61 (75%)
Query: 57 VGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV-GKDIAAK 115
+G+ V+VFER+D++GGLL YGIP MKL K +VQRRV LL GIEFK N N+ +D +K
Sbjct: 174 LGYKVSVFERSDKIGGLLMYGIPDMKLDKSIVQRRVDLLKKSGIEFKVNENIDSRDKVSK 233
Query: 116 V 116
+
Sbjct: 234 L 234
>WB|WBGene00012326 [details] [associations]
symbol:W07E11.1 species:6239 "Caenorhabditis elegans"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA] [GO:0015930 "glutamate synthase
activity" evidence=IEA] [GO:0016638 "oxidoreductase activity,
acting on the CH-NH2 group of donors" evidence=IEA] [GO:0016639
"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006807 "nitrogen compound
metabolic process" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898 Pfam:PF07992
PIRSF:PIRSF000187 InterPro:IPR016040 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:3.20.20.70 Gene3D:3.40.50.720
GO:GO:0005506 GO:GO:0050660 GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 GO:GO:0010181 InterPro:IPR017932
PROSITE:PS51278 SUPFAM:SSF46548 GeneTree:ENSGT00500000044896
Gene3D:2.160.20.60 SUPFAM:SSF69336 EMBL:Z49868 GO:GO:0016040
TIGRFAMs:TIGR01317 OMA:PPAWQSN EMBL:Z49889 RefSeq:NP_509693.2
ProteinModelPortal:G5EF05 SMR:G5EF05 EnsemblMetazoa:W07E11.1
GeneID:181223 KEGG:cel:CELE_W07E11.1 CTD:181223 WormBase:W07E11.1
Uniprot:G5EF05
Length = 2175
Score = 373 (136.4 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 73/139 (52%), Positives = 98/139 (70%)
Query: 138 VGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKE 197
VGH+V V+ER +RVGGLL+YGIPTMKL K VV RRV LL EG+ F TN +GK + A
Sbjct: 1836 VGHTVVVYERKNRVGGLLRYGIPTMKLDKFVVDRRVSLLEQEGVRFLTNTEIGKHVPADF 1895
Query: 198 LYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNE-NVSPISAKDKN 256
L +E DA+++CTG+T RDL + GR G+ FAM +LE Q+++ G++ + + +K
Sbjct: 1896 LLKENDAIIVCTGSTTARDLNVEGRDAKGVCFAMEYLEKSQRRRAGDDVSWEGLDPANKK 1955
Query: 257 VIVIGGGDTGCDCIATSLR 275
VI++GGGDT DCIATS R
Sbjct: 1956 VIILGGGDTATDCIATSNR 1974
Score = 191 (72.3 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Query: 57 VGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAA 114
VGH+V V+ER +RVGGLL+YGIPTMKL K VV RRV LL EG+ F TN +GK + A
Sbjct: 1836 VGHTVVVYERKNRVGGLLRYGIPTMKLDKFVVDRRVSLLEQEGVRFLTNTEIGKHVPA 1893
>TIGR_CMR|SPO_3770 [details] [associations]
symbol:SPO_3770 "glutamate synthase, small subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 KO:K00266 HOGENOM:HOG000031443 ProtClustDB:PRK11749
RefSeq:YP_168965.1 ProteinModelPortal:Q5LLZ4 GeneID:3196508
KEGG:sil:SPO3770 PATRIC:23381037 OMA:EFRIPIY Uniprot:Q5LLZ4
Length = 477
Score = 293 (108.2 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 67/144 (46%), Positives = 91/144 (63%)
Query: 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAK-- 196
G VTV++R DR GGLL YGIP KL KEVV+RR +LLA G+ F+ N +V AAK
Sbjct: 171 GVQVTVYDRYDRAGGLLMYGIPGFKLEKEVVERRNRLLADGGVRFELNCDVD---AAKFA 227
Query: 197 ELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNE----NVSPISA 252
EL DA+++ TG RDL +PG L GI A+ +L + +K G+E + ++A
Sbjct: 228 ELRAAHDAVIIATGVYKSRDLSMPGSGLGGIEKAIDYLAASNRKSFGDEVADFDNGRLNA 287
Query: 253 KDKNVIVIGGGDTGCDCIATSLRQ 276
+ K V+VIGGGDT DC+ T++RQ
Sbjct: 288 EGKRVVVIGGGDTAMDCVRTAIRQ 311
Score = 148 (57.2 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 108
G VTV++R DR GGLL YGIP KL KEVV+RR +LLA G+ F+ N +V
Sbjct: 171 GVQVTVYDRYDRAGGLLMYGIPGFKLEKEVVERRNRLLADGGVRFELNCDV 221
>UNIPROTKB|Q0C617 [details] [associations]
symbol:gltD "Glutamate synthase, small subunit"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS]
InterPro:IPR001327 InterPro:IPR006006 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660 GO:GO:0051536
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 EMBL:CP000158 GenomeReviews:CP000158_GR
SUPFAM:SSF46548 KO:K00266 HOGENOM:HOG000031443 ProtClustDB:PRK11749
RefSeq:YP_758826.1 ProteinModelPortal:Q0C617 STRING:Q0C617
GeneID:4289253 KEGG:hne:HNE_0092 PATRIC:32212968 OMA:ANIDNEN
BioCyc:HNEP228405:GI69-139-MONOMER Uniprot:Q0C617
Length = 481
Score = 291 (107.5 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 58/142 (40%), Positives = 88/142 (61%)
Query: 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKEL 198
G+ VTV++ DR GGLL YGIP KL K+VV+RR+ L A GI F+ N +G D++ +L
Sbjct: 170 GYQVTVYDAYDRGGGLLMYGIPGFKLEKDVVERRIHHLEASGISFRFNTRIGADMSLADL 229
Query: 199 YEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNE----NVSPISAKD 254
E+ D +L+ TG +DL PG G+ A+ +L + + +G+ + ++A+
Sbjct: 230 REQHDTVLIATGVYAAKDLKCPGVGAEGVLPALDYLTASNRVDLGDTVEAYDAGVLNAEG 289
Query: 255 KNVIVIGGGDTGCDCIATSLRQ 276
K V+VIGGGDT DC+ T++RQ
Sbjct: 290 KRVVVIGGGDTAMDCVRTAIRQ 311
Score = 152 (58.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 113
G+ VTV++ DR GGLL YGIP KL K+VV+RR+ L A GI F+ N +G D++
Sbjct: 170 GYQVTVYDAYDRGGGLLMYGIPGFKLEKDVVERRIHHLEASGISFRFNTRIGADMS 225
>TIGR_CMR|CPS_4502 [details] [associations]
symbol:CPS_4502 "glutamate synthase, small subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0051536 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 GO:GO:0004355 SUPFAM:SSF46548 KO:K00266
OMA:QGRIVAP ProtClustDB:PRK12810 RefSeq:YP_271150.1
ProteinModelPortal:Q47VM2 STRING:Q47VM2 GeneID:3522364
KEGG:cps:CPS_4502 PATRIC:21471827
BioCyc:CPSY167879:GI48-4511-MONOMER Uniprot:Q47VM2
Length = 475
Score = 288 (106.4 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 62/144 (43%), Positives = 87/144 (60%)
Query: 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKEL 198
G V V++R+ ++GGLL +GIP+ KL K V+Q R ++L GIEF+ NINVG DI+ K++
Sbjct: 169 GVDVVVYDRHAQIGGLLTFGIPSFKLEKSVIQTRREILEGMGIEFRLNINVGTDISFKDI 228
Query: 199 YEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMG-----NENVSP-ISA 252
+E+DA+ L G G+Y A+ FL + MG N V P ++
Sbjct: 229 SDEYDAVFLGLGTYTDMSGGFDNEGAQGVYNALDFLIGNTQNLMGFTKADNAQVKPYVNF 288
Query: 253 KDKNVIVIGGGDTGCDCIATSLRQ 276
KDK VIV+GGGDT DC+ TS+RQ
Sbjct: 289 KDKKVIVLGGGDTAMDCVRTSIRQ 312
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAK 115
G V V++R+ ++GGLL +GIP+ KL K V+Q R ++L GIEF+ NINVG DI+ K
Sbjct: 169 GVDVVVYDRHAQIGGLLTFGIPSFKLEKSVIQTRREILEGMGIEFRLNINVGTDISFK 226
>UNIPROTKB|Q9KPJ0 [details] [associations]
symbol:VC_2377 "Glutamate synthase, small subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR023753 Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0051536 GO:GO:0006537 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 SUPFAM:SSF46548 HSSP:Q28943 KO:K00266 OMA:QGRIVAP
ProtClustDB:PRK12810 PIR:G82083 RefSeq:NP_232007.1
ProteinModelPortal:Q9KPJ0 DNASU:2613046 GeneID:2613046
KEGG:vch:VC2377 PATRIC:20083777 Uniprot:Q9KPJ0
Length = 471
Score = 270 (100.1 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 56/134 (41%), Positives = 81/134 (60%)
Query: 144 VFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYEEFD 203
VF+R +GGLL +GIP+ KL K V++ R ++ + GIEF+ N+ VG+DI ++L +E+D
Sbjct: 175 VFDRYPEIGGLLTFGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQDITLQQLLDEYD 234
Query: 204 ALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSP-ISAKDKNVIVIGG 262
A+ L G + G+Y A+ FL S K M N +P I KNV+V+GG
Sbjct: 235 AVFLGVGTYQYMRAGLANEDAPGVYDALPFLISNTYKVMELNNEAPFIDMAGKNVVVLGG 294
Query: 263 GDTGCDCIATSLRQ 276
GDT DC+ TS+RQ
Sbjct: 295 GDTAMDCVRTSIRQ 308
Score = 132 (51.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 63 VFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI 112
VF+R +GGLL +GIP+ KL K V++ R ++ + GIEF+ N+ VG+DI
Sbjct: 175 VFDRYPEIGGLLTFGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQDI 224
Score = 42 (19.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 170 QRRVKLLAAEGIEFKTNIN-VGKDIAAK 196
+R VK EG+EF N+ +G ++ A+
Sbjct: 328 RREVKNAKEEGVEFMFNLQPLGIEVNAQ 355
>TIGR_CMR|VC_2377 [details] [associations]
symbol:VC_2377 "glutamate synthase, small subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR006006
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF07992 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 HSSP:Q28943 KO:K00266 OMA:QGRIVAP
ProtClustDB:PRK12810 PIR:G82083 RefSeq:NP_232007.1
ProteinModelPortal:Q9KPJ0 DNASU:2613046 GeneID:2613046
KEGG:vch:VC2377 PATRIC:20083777 Uniprot:Q9KPJ0
Length = 471
Score = 270 (100.1 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 56/134 (41%), Positives = 81/134 (60%)
Query: 144 VFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYEEFD 203
VF+R +GGLL +GIP+ KL K V++ R ++ + GIEF+ N+ VG+DI ++L +E+D
Sbjct: 175 VFDRYPEIGGLLTFGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQDITLQQLLDEYD 234
Query: 204 ALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSP-ISAKDKNVIVIGG 262
A+ L G + G+Y A+ FL S K M N +P I KNV+V+GG
Sbjct: 235 AVFLGVGTYQYMRAGLANEDAPGVYDALPFLISNTYKVMELNNEAPFIDMAGKNVVVLGG 294
Query: 263 GDTGCDCIATSLRQ 276
GDT DC+ TS+RQ
Sbjct: 295 GDTAMDCVRTSIRQ 308
Score = 132 (51.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 63 VFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI 112
VF+R +GGLL +GIP+ KL K V++ R ++ + GIEF+ N+ VG+DI
Sbjct: 175 VFDRYPEIGGLLTFGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQDI 224
Score = 42 (19.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 170 QRRVKLLAAEGIEFKTNIN-VGKDIAAK 196
+R VK EG+EF N+ +G ++ A+
Sbjct: 328 RREVKNAKEEGVEFMFNLQPLGIEVNAQ 355
>UNIPROTKB|P37127 [details] [associations]
symbol:aegA species:83333 "Escherichia coli K-12"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0009987 "cellular process"
evidence=ND] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0006537
"glutamate biosynthetic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001450 InterPro:IPR006006 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00037 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR016040 InterPro:IPR017900
Prosite:PS00198 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0009055
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0051539 GO:GO:0006537
eggNOG:COG0493 EMBL:L34011 PIR:C65022 RefSeq:NP_416963.1
RefSeq:YP_490695.1 ProteinModelPortal:P37127 SMR:P37127
DIP:DIP-9060N IntAct:P37127 PRIDE:P37127
EnsemblBacteria:EBESCT00000003403 EnsemblBacteria:EBESCT00000017287
GeneID:12931935 GeneID:947383 KEGG:ecj:Y75_p2420 KEGG:eco:b2468
PATRIC:32120319 EchoBASE:EB2308 EcoGene:EG12409
HOGENOM:HOG000031439 OMA:VESRYRY ProtClustDB:PRK12769
BioCyc:EcoCyc:EG12409-MONOMER BioCyc:ECOL316407:JW2452-MONOMER
Genevestigator:P37127 GO:GO:0016639 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 Uniprot:P37127
Length = 659
Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 56/140 (40%), Positives = 85/140 (60%)
Query: 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKEL 198
G VTV++R+ +GGLL +GIP+ KL K ++ RR ++ +A GI F+ N VGKD++ L
Sbjct: 350 GVGVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDVSLDSL 409
Query: 199 YEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENV--SP-ISAKDK 255
E++DA+ + G +P G+Y A+ FL + K+ MG E + P I+
Sbjct: 410 LEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGL 469
Query: 256 NVIVIGGGDTGCDCIATSLR 275
NV+V+GGGDT DC+ T+LR
Sbjct: 470 NVVVLGGGDTAMDCVRTALR 489
Score = 143 (55.4 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 26/56 (46%), Positives = 40/56 (71%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 113
G VTV++R+ +GGLL +GIP+ KL K ++ RR ++ +A GI F+ N VGKD++
Sbjct: 350 GVGVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDVS 405
>UNIPROTKB|P09832 [details] [associations]
symbol:gltD "glutamate synthase, small subunit"
species:83333 "Escherichia coli K-12" [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0097054 "L-glutamate
biosynthetic process" evidence=IEA] [GO:0006807 "nitrogen compound
metabolic process" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=IEA;IDA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA;IDA] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 Pfam:PF00070 PROSITE:PS51379 UniPathway:UPA00045
UniPathway:UPA00634 InterPro:IPR016040 Gene3D:3.40.50.720
GO:GO:0050660 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 EMBL:U18997 GO:GO:0051539
GO:GO:0006537 eggNOG:COG0493 HOGENOM:HOG000031439
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 GO:GO:0004355
SUPFAM:SSF46548 GO:GO:0097054 EMBL:M18747 BRENDA:1.4.1.13
PIR:G65112 RefSeq:NP_417680.1 RefSeq:YP_491398.1
ProteinModelPortal:P09832 SMR:P09832 DIP:DIP-9803N IntAct:P09832
MINT:MINT-1248739 SWISS-2DPAGE:P09832 PaxDb:P09832 PRIDE:P09832
EnsemblBacteria:EBESCT00000004091 EnsemblBacteria:EBESCT00000017797
GeneID:12933433 GeneID:947723 KEGG:ecj:Y75_p3133 KEGG:eco:b3213
PATRIC:32121848 EchoBASE:EB0399 EcoGene:EG10404 KO:K00266
OMA:QGRIVAP ProtClustDB:PRK12810 BioCyc:EcoCyc:GLUSYNSMALL-MONOMER
BioCyc:ECOL316407:JW3180-MONOMER BioCyc:MetaCyc:GLUSYNSMALL-MONOMER
BioCyc:MOB3B:GLUSYNSMALL-MONOMER Genevestigator:P09832
Uniprot:P09832
Length = 472
Score = 264 (98.0 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 56/141 (39%), Positives = 80/141 (56%)
Query: 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKEL 198
G VF+R+ +GGLL +GIP KL KEV+ RR ++ GIEFK N VG+D+ +L
Sbjct: 169 GVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDL 228
Query: 199 YEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMG--NENVSP-ISAKDK 255
++DA+ L G + G+Y A+ FL + K+ MG P +S + K
Sbjct: 229 LSDYDAVFLGVGTYQSMRGGLENEDADGVYAALPFLIANTKQLMGFGETRDEPFVSMEGK 288
Query: 256 NVIVIGGGDTGCDCIATSLRQ 276
V+V+GGGDT DC+ TS+RQ
Sbjct: 289 RVVVLGGGDTAMDCVRTSVRQ 309
Score = 144 (55.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI 112
G VF+R+ +GGLL +GIP KL KEV+ RR ++ GIEFK N VG+D+
Sbjct: 169 GVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDV 223
Score = 46 (21.3 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 170 QRRVKLLAAEGIEFKTNI 187
+R VK EG+EFK N+
Sbjct: 329 RREVKNAREEGVEFKFNV 346
>UNIPROTKB|Q4KJI5 [details] [associations]
symbol:gltD "Glutamate synthase, small subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
TIGRFAMs:TIGR01318 GO:GO:0004355 SUPFAM:SSF46548 KO:K00266
ProtClustDB:PRK12810 RefSeq:YP_257598.1 ProteinModelPortal:Q4KJI5
STRING:Q4KJI5 GeneID:3481045 KEGG:pfl:PFL_0454 PATRIC:19870053
OMA:NDFQFID BioCyc:PFLU220664:GIX8-455-MONOMER Uniprot:Q4KJI5
Length = 472
Score = 263 (97.6 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 59/151 (39%), Positives = 88/151 (58%)
Query: 130 CPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189
C ++V G + VF++N +GGLL +GIP KL K V+ R ++ + GIEF+ N V
Sbjct: 164 CADVLVR-GGVTPVVFDKNPEIGGLLTFGIPEFKLEKTVLSNRREVFSGMGIEFRLNTEV 222
Query: 190 GKDIAAKELYEEFDALLLCTGA-TWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVS 248
GKD+ ++L E+DA+ + G T+ + G L G+Y A+ FL + + +G E S
Sbjct: 223 GKDVTMEQLLAEYDAVFMGMGTYTYMKG-GFAGEDLPGVYDALDFLIANVNRNLGFEK-S 280
Query: 249 P---ISAKDKNVIVIGGGDTGCDCIATSLRQ 276
P + K K V+V+GGGDT DC TS+RQ
Sbjct: 281 PEDFVDMKGKKVVVLGGGDTAMDCNRTSIRQ 311
Score = 134 (52.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI 112
G + VF++N +GGLL +GIP KL K V+ R ++ + GIEF+ N VGKD+
Sbjct: 172 GVTPVVFDKNPEIGGLLTFGIPEFKLEKTVLSNRREVFSGMGIEFRLNTEVGKDV 226
>TIGR_CMR|GSU_3057 [details] [associations]
symbol:GSU_3057 "glutamate synthase (NADPH),
homotetrameric" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR001327 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PROSITE:PS51379 GO:GO:0050660 GO:GO:0016491 GO:GO:0051536
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000031439
Gene3D:1.10.1060.10 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749
OMA:AYRRTIN InterPro:IPR006004 TIGRFAMs:TIGR01316
RefSeq:NP_954099.1 ProteinModelPortal:Q748E7 GeneID:2686900
KEGG:gsu:GSU3057 PATRIC:22028965
BioCyc:GSUL243231:GH27-2997-MONOMER Uniprot:Q748E7
Length = 470
Score = 259 (96.2 bits), Expect = 9.4e-22, P = 9.4e-22
Identities = 56/139 (40%), Positives = 78/139 (56%)
Query: 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKEL 198
GH VT+FE GG+L+YGIP +L K ++ V L A G+ + N+ +GK + +L
Sbjct: 172 GHGVTIFEALHDTGGVLRYGIPEFRLPKTIIDAEVARLLALGVTVECNVIIGKTLTLAQL 231
Query: 199 YEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNE--NVSPISAKDKN 256
EEFDA+ + GA P L IPG L G+Y A +L G + + +PI A K
Sbjct: 232 REEFDAVFIANGAGLPVMLSIPGENLKGVYSANEYLTRVNLMGAGRDPGSTTPIIA-GKR 290
Query: 257 VIVIGGGDTGCDCIATSLR 275
V VIGGG+T DC+ T+ R
Sbjct: 291 VAVIGGGNTAMDCVRTARR 309
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI 112
GH VT+FE GG+L+YGIP +L K ++ V L A G+ + N+ +GK +
Sbjct: 172 GHGVTIFEALHDTGGVLRYGIPEFRLPKTIIDAEVARLLALGVTVECNVIIGKTL 226
>TIGR_CMR|SO_1324 [details] [associations]
symbol:SO_1324 "glutamate synthase, small subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR006006 InterPro:IPR009051 InterPro:IPR012285
Pfam:PF00070 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006537
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318
GO:GO:0004355 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK12810
OMA:NDFQFID RefSeq:NP_716944.1 ProteinModelPortal:Q8EHA5
GeneID:1169145 KEGG:son:SO_1324 PATRIC:23522304 Uniprot:Q8EHA5
Length = 468
Score = 257 (95.5 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 55/140 (39%), Positives = 79/140 (56%)
Query: 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKEL 198
G VF++ ++GGLL YGIP KL K V+ R +L GIEFK + VGKD+A +L
Sbjct: 168 GVKAVVFDKYPQIGGLLTYGIPAFKLDKAVMATRRTVLEGMGIEFKLGVTVGKDVAFNQL 227
Query: 199 YEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVS-P-ISAKDKN 256
EE+DA+ L G + G G+Y A+ +L MG+ + P ++ K
Sbjct: 228 LEEYDAVFLGMGTYTAMKAGLEGEDAQGVYQALPYLIGNTHHLMGSTSPDMPYLNLAGKR 287
Query: 257 VIVIGGGDTGCDCIATSLRQ 276
V+V+GGGDT DC+ T++RQ
Sbjct: 288 VVVLGGGDTAMDCVRTAVRQ 307
Score = 136 (52.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 58 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIA 113
G VF++ ++GGLL YGIP KL K V+ R +L GIEFK + VGKD+A
Sbjct: 168 GVKAVVFDKYPQIGGLLTYGIPAFKLDKAVMATRRTVLEGMGIEFKLGVTVGKDVA 223
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 234 LESWQKKQMGNENVSPISAKDKNVIVIGGGDT--GCDCIATSLRQ 276
L+ W + + + +P N V GGD G D + T++ +
Sbjct: 413 LDQWGRVKASKQADNPFQTT--NPKVFAGGDMVRGSDLVVTAIAE 455
>TIGR_CMR|CHY_1991 [details] [associations]
symbol:CHY_1991 "glutamate synthase (NADPH),
homotetrameric" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0004355 "glutamate synthase (NADPH) activity"
evidence=ISS] [GO:0006537 "glutamate biosynthetic process"
evidence=ISS] InterPro:IPR001327 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0051536 eggNOG:COG0493
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 GO:GO:0004355
SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749 RefSeq:YP_360810.1
ProteinModelPortal:Q3AAM4 STRING:Q3AAM4 GeneID:3728589
KEGG:chy:CHY_1991 PATRIC:21277069 OMA:AYRRTIN
BioCyc:CHYD246194:GJCN-1990-MONOMER InterPro:IPR006004
TIGRFAMs:TIGR01316 Uniprot:Q3AAM4
Length = 464
Score = 244 (91.0 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 56/142 (39%), Positives = 80/142 (56%)
Query: 138 VGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKE 197
+GH VT+FE GG+L YGIP +L K +VQ+ + L G+E KTN +GK + E
Sbjct: 163 LGHKVTIFEALHVPGGVLMYGIPEFRLPKRIVQQEIDNLKKLGVEIKTNTVIGKSLTVDE 222
Query: 198 LYEE--FDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLE--SWQKKQMGNENVSPISAK 253
L +E +DA+ + TGA P + IPG L+G+Y A FL + K + E +PI
Sbjct: 223 LLDEEGYDAVFVGTGAGLPNFMGIPGENLNGVYSANEFLTRTNLMKAYLFPEYDTPIKVG 282
Query: 254 DKNVIVIGGGDTGCDCIATSLR 275
+K V V+G G+ D T+LR
Sbjct: 283 EK-VAVLGAGNVAMDAARTALR 303
Score = 131 (51.2 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 57 VGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI 112
+GH VT+FE GG+L YGIP +L K +VQ+ + L G+E KTN +GK +
Sbjct: 163 LGHKVTIFEALHVPGGVLMYGIPEFRLPKRIVQQEIDNLKKLGVEIKTNTVIGKSL 218
>UNIPROTKB|Q46820 [details] [associations]
symbol:ygfT "fused predicted oxidoreductase, Fe-S subunit
and nucleotide-binding subunit" species:83333 "Escherichia coli
K-12" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0006537
"glutamate biosynthetic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001327 InterPro:IPR001450 InterPro:IPR006006
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR023753
Pfam:PF00037 Pfam:PF00070 Pfam:PF07992 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0050660
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0051539 GO:GO:0006537
eggNOG:COG0493 HOGENOM:HOG000031439 GO:GO:0016639
Gene3D:1.10.1060.10 TIGRFAMs:TIGR01318 EMBL:U28375 PIR:G65072
RefSeq:NP_417363.2 RefSeq:YP_491088.1 ProteinModelPortal:Q46820
SMR:Q46820 DIP:DIP-12175N PRIDE:Q46820
EnsemblBacteria:EBESCT00000001813 EnsemblBacteria:EBESCT00000017804
GeneID:12933341 GeneID:949018 KEGG:ecj:Y75_p2819 KEGG:eco:b2887
PATRIC:32121182 EchoBASE:EB2881 EcoGene:EG13070 OMA:KVVPRIE
ProtClustDB:PRK12809 BioCyc:EcoCyc:G7506-MONOMER
BioCyc:ECOL316407:JW5469-MONOMER Genevestigator:Q46820
Uniprot:Q46820
Length = 639
Score = 244 (91.0 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 51/149 (34%), Positives = 81/149 (54%)
Query: 130 CPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189
C ++ G V VF+R+ +GG+L +GIP KL K V+ +R ++ A GI+F N +
Sbjct: 325 CADILAR-AGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEI 383
Query: 190 GKDIAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMG---NEN 246
G+DI +L E+DA+ + G +P G+ A+ FL + ++ MG +E
Sbjct: 384 GRDITFSDLTSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFLTAHTRQLMGLPESEE 443
Query: 247 VSPISAKDKNVIVIGGGDTGCDCIATSLR 275
+ K V+V+GGGDT DC+ TS+R
Sbjct: 444 YPLTDVEGKRVVVLGGGDTTMDCLRTSIR 472
Score = 133 (51.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 38/107 (35%), Positives = 54/107 (50%)
Query: 7 LEKRL-DNTLIQECEPVLSGKVPRIDLEYTINNECRAFTATLSYHISIQHLVGHSVTVFE 65
LE+ + D L P +S VPR + I A A L I G V VF+
Sbjct: 286 LERYITDTALAMGWRPDVSKVVPRSEKVAVIG----AGPAGLGC-ADILARAGVQVDVFD 340
Query: 66 RNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDI 112
R+ +GG+L +GIP KL K V+ +R ++ A GI+F N +G+DI
Sbjct: 341 RHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387
Score = 47 (21.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/84 (25%), Positives = 32/84 (38%)
Query: 191 KDIAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPI 250
+ +A E D L++ G + +P Q SGI L+ W Q G+ P
Sbjct: 545 RPVAGSEFELPADVLIMAFGF---QAHAMPWLQGSGIK-----LDKWGLIQTGDVGYLPT 596
Query: 251 SAKDKNVIVIGGGDTGCDCIATSL 274
K V G G D + T++
Sbjct: 597 QTHLKKVFAGGDAVHGADLVVTAM 620
>TIGR_CMR|DET_0038 [details] [associations]
symbol:DET_0038 "glutamate synthase (NADPH),
homotetrameric" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR001327 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
GO:GO:0004355 SUPFAM:SSF46548 KO:K00266 ProtClustDB:PRK11749
InterPro:IPR006004 TIGRFAMs:TIGR01316 RefSeq:YP_180793.1
ProteinModelPortal:Q3ZAF6 STRING:Q3ZAF6 GeneID:3229074
KEGG:det:DET0038 PATRIC:21607179 OMA:CSANEFL
BioCyc:DETH243164:GJNF-38-MONOMER Uniprot:Q3ZAF6
Length = 465
Score = 215 (80.7 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 49/141 (34%), Positives = 78/141 (55%)
Query: 138 VGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKE 197
+GH VT+FE GG+L YGIP +L K++VQ ++ + + G+ + N G+ + ++
Sbjct: 165 LGHDVTLFESLHTAGGVLMYGIPEFRLPKDIVQGEIEYVKSLGVTLELNSVAGRLFSLED 224
Query: 198 LYEE-FDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGN--ENVSPISAKD 254
L+++ F A+ L TGA P L + G LSG+Y A FL + N + +P+ K
Sbjct: 225 LFKQGFQAVFLATGAGLPLFLNVQGENLSGVYSANEFLTRVNLMKAHNFPSSDTPVK-KG 283
Query: 255 KNVIVIGGGDTGCDCIATSLR 275
+ V VIGGG+ D +LR
Sbjct: 284 RKVAVIGGGNVAMDAARCALR 304
>TIGR_CMR|SO_0988 [details] [associations]
symbol:SO_0988 "formate dehydrogenase, alpha subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] InterPro:IPR001041 InterPro:IPR001327
InterPro:IPR001450 InterPro:IPR006478 InterPro:IPR006656
InterPro:IPR006657 InterPro:IPR006963 InterPro:IPR012285
InterPro:IPR017896 Pfam:PF00070 Pfam:PF00384 Pfam:PF01568
Pfam:PF04879 Pfam:PF12838 PROSITE:PS51085 PROSITE:PS51379
SMART:SM00926 InterPro:IPR016040 InterPro:IPR017900 Prosite:PS00198
Gene3D:3.40.50.720 GO:GO:0009055 GO:GO:0050660 GO:GO:0051536
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0030151 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0015942 GO:GO:0008863 GO:GO:0009326 HOGENOM:HOG000031440
KO:K00123 TIGRFAMs:TIGR01591 HSSP:P07658 RefSeq:NP_716617.1
ProteinModelPortal:Q8EI61 GeneID:1168830 KEGG:son:SO_0988
PATRIC:23521625 OMA:MTNDIPS ProtClustDB:CLSK906042 Uniprot:Q8EI61
Length = 1428
Score = 208 (78.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 46/139 (33%), Positives = 74/139 (53%)
Query: 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKEL 198
GH++ +FE + GG L+YGIP +L K ++ + ++LL G+ T + +G +I +L
Sbjct: 229 GHNIEIFEAMPKAGGWLRYGIPEYRLPKAILDKEIELLCRNGLTIHTQMRLGHEIHLNQL 288
Query: 199 YEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESW-QKKQMGNENVSPISAKDKNV 257
+FDA+ L GA + G +L+G Y + FL+ KQ+ K V
Sbjct: 289 ITDFDAVCLAIGAQKAVPMHYKGSELAGCYLGVDFLKDHCLDKQL---------KLGKKV 339
Query: 258 IVIGGGDTGCDCIATSLRQ 276
VIGGG+T DC T++R+
Sbjct: 340 AVIGGGNTAIDCARTAVRE 358
Score = 120 (47.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 49 YHISIQHLVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 108
Y++S Q GH++ +FE + GG L+YGIP +L K ++ + ++LL G+ T + +
Sbjct: 223 YYLSNQ---GHNIEIFEAMPKAGGWLRYGIPEYRLPKAILDKEIELLCRNGLTIHTQMRL 279
Query: 109 GKDI 112
G +I
Sbjct: 280 GHEI 283
Score = 52 (23.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 250 ISAKDKNVIVIGGGDTGC--DCIATSLRQ 276
+S KD +VI I G DT C IA+ ++Q
Sbjct: 892 LSIKDSDVIFILGSDTTCAHPIIASKIQQ 920
>UNIPROTKB|Q8Z5A6 [details] [associations]
symbol:preT "NAD-dependent dihydropyrimidine dehydrogenase
subunit PreT homolog" species:90370 "Salmonella enterica subsp.
enterica serovar Typhi" [GO:0003954 "NADH dehydrogenase activity"
evidence=ISS] [GO:0006208 "pyrimidine nucleobase catabolic process"
evidence=ISS] InterPro:IPR000103 InterPro:IPR001327
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368
PRINTS:PR00469 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0050660
GO:GO:0051536 eggNOG:COG0493 HOGENOM:HOG000031439
Gene3D:1.10.1060.10 GO:GO:0003954 EMBL:AE014613
GenomeReviews:AE014613_GR GenomeReviews:AL513382_GR GO:GO:0006208
SUPFAM:SSF46548 GO:GO:0004159 OMA:SLKMTRE ProtClustDB:PRK11749
EMBL:AL627273 RefSeq:NP_804518.1 ProteinModelPortal:Q8Z5A6
GeneID:1069835 KEGG:stt:t0669 KEGG:sty:STY2416 PATRIC:18542783
Uniprot:Q8Z5A6
Length = 413
Score = 182 (69.1 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 43/139 (30%), Positives = 80/139 (57%)
Query: 138 VGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKE 197
+G+ VT++E+ + GG L++GIP +L + V+ + + + G+ K N +VG ++ +
Sbjct: 146 LGYDVTIYEKQPQPGGWLRHGIPAFRLPQSVLDQEIARIVEMGVNIKCNCDVGGSLSLAQ 205
Query: 198 LYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVS-PISAKDKN 256
L E+ A+L+ G + DLP+ Q S + A+ FL Q+ + + ++S P SA
Sbjct: 206 LKAEYRAVLMTVGMSCGSDLPL-FEQASHVEIAVDFL---QRARQADGDISVPRSA---- 257
Query: 257 VIVIGGGDTGCDCIATSLR 275
++IGGGD D +A++L+
Sbjct: 258 -LIIGGGDVAMD-VASTLK 274
Score = 114 (45.2 bits), Expect = 0.00057, P = 0.00057
Identities = 21/69 (30%), Positives = 41/69 (59%)
Query: 45 ATLSYHISIQHLVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKT 104
A L +++ HL G+ VT++E+ + GG L++GIP +L + V+ + + + G+ K
Sbjct: 135 AGLQASVTLTHL-GYDVTIYEKQPQPGGWLRHGIPAFRLPQSVLDQEIARIVEMGVNIKC 193
Query: 105 NINVGKDIA 113
N +VG ++
Sbjct: 194 NCDVGGSLS 202
>UNIPROTKB|Q74FU5 [details] [associations]
symbol:sfrB "NADPH oxidoreductase, beta subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009061
"anaerobic respiration" evidence=TAS] [GO:0016491 "oxidoreductase
activity" evidence=IDA] InterPro:IPR012285 InterPro:IPR019575
InterPro:IPR023753 Pfam:PF07992 Pfam:PF10589 SMART:SM00928
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491
GO:GO:0051536 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009061
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 RefSeq:NP_951568.1
ProteinModelPortal:Q74FU5 GeneID:2685978 KEGG:gsu:GSU0510
PATRIC:22023775 KO:K15022 OMA:IEACPSK ProtClustDB:CLSK924408
BioCyc:GSUL243231:GH27-533-MONOMER Uniprot:Q74FU5
Length = 672
Score = 178 (67.7 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 39/140 (27%), Positives = 76/140 (54%)
Query: 139 GHSVTVFER--NDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAK 196
G+ T++E GG++ GIP + + ++QR + ++++ G++ + +GKDI+ +
Sbjct: 276 GYPCTIYEALPEGYGGGMIAVGIPPYRQPRHLLQRDIDIISSMGVDIIYDTRIGKDISLE 335
Query: 197 ELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKN 256
EL ++FDA+ L GA + + + G F ++ ++ MG P + K
Sbjct: 336 ELKQKFDAVFLAPGAHRSKPMGVEGEDKGYKGFLKGGIDFLREAYMGR----P-TGMGKK 390
Query: 257 VIVIGGGDTGCDCIATSLRQ 276
V+V+GGG+T DC+ +LR+
Sbjct: 391 VVVVGGGNTAIDCVRVALRE 410
>TIGR_CMR|GSU_0510 [details] [associations]
symbol:GSU_0510 "Fe(III) reductase, beta subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009061
"anaerobic respiration" evidence=TAS] [GO:0016491 "oxidoreductase
activity" evidence=IDA] InterPro:IPR012285 InterPro:IPR019575
InterPro:IPR023753 Pfam:PF07992 Pfam:PF10589 SMART:SM00928
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491
GO:GO:0051536 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009061
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 RefSeq:NP_951568.1
ProteinModelPortal:Q74FU5 GeneID:2685978 KEGG:gsu:GSU0510
PATRIC:22023775 KO:K15022 OMA:IEACPSK ProtClustDB:CLSK924408
BioCyc:GSUL243231:GH27-533-MONOMER Uniprot:Q74FU5
Length = 672
Score = 178 (67.7 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 39/140 (27%), Positives = 76/140 (54%)
Query: 139 GHSVTVFER--NDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAK 196
G+ T++E GG++ GIP + + ++QR + ++++ G++ + +GKDI+ +
Sbjct: 276 GYPCTIYEALPEGYGGGMIAVGIPPYRQPRHLLQRDIDIISSMGVDIIYDTRIGKDISLE 335
Query: 197 ELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKN 256
EL ++FDA+ L GA + + + G F ++ ++ MG P + K
Sbjct: 336 ELKQKFDAVFLAPGAHRSKPMGVEGEDKGYKGFLKGGIDFLREAYMGR----P-TGMGKK 390
Query: 257 VIVIGGGDTGCDCIATSLRQ 276
V+V+GGG+T DC+ +LR+
Sbjct: 391 VVVVGGGNTAIDCVRVALRE 410
>UNIPROTKB|Q8ZNL8 [details] [associations]
symbol:preT "NAD-dependent dihydropyrimidine dehydrogenase
subunit PreT" species:99287 "Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2" [GO:0003954 "NADH dehydrogenase
activity" evidence=ISS] [GO:0006208 "pyrimidine nucleobase
catabolic process" evidence=ISS] InterPro:IPR000103
InterPro:IPR001327 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR013027 InterPro:IPR023753 Pfam:PF00070 Pfam:PF07992
PRINTS:PR00368 PRINTS:PR00469 InterPro:IPR016040 Gene3D:3.40.50.720
GO:GO:0050660 EMBL:AE006468 GenomeReviews:AE006468_GR GO:GO:0051536
eggNOG:COG0493 HOGENOM:HOG000031439 Gene3D:1.10.1060.10
GO:GO:0003954 GO:GO:0006208 SUPFAM:SSF46548 GO:GO:0004159
OMA:SLKMTRE ProtClustDB:PRK11749 RefSeq:NP_461131.1
ProteinModelPortal:Q8ZNL8 PRIDE:Q8ZNL8 GeneID:1253708
KEGG:stm:STM2186 PATRIC:32382965 Uniprot:Q8ZNL8
Length = 413
Score = 174 (66.3 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 42/139 (30%), Positives = 78/139 (56%)
Query: 138 VGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKE 197
+G+ VT++E+ + GG L++GIP +L + V+ + + + G+ K N VG ++ +
Sbjct: 146 LGYDVTIYEKQPQPGGWLRHGIPAFRLPQSVLDQEIARIVEMGVNIKCNCEVGGSLSLAQ 205
Query: 198 LYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVS-PISAKDKN 256
L E+ A+L+ G + LP+ Q S + A+ FL Q+ + + ++S P SA
Sbjct: 206 LKAEYRAVLMTVGMSCGSGLPL-FEQASHVEIAVDFL---QRARQADGDISVPRSA---- 257
Query: 257 VIVIGGGDTGCDCIATSLR 275
++IGGGD D +A++L+
Sbjct: 258 -LIIGGGDVAMD-VASTLK 274
Score = 113 (44.8 bits), Expect = 0.00074, P = 0.00074
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 45 ATLSYHISIQHLVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKT 104
A L +++ HL G+ VT++E+ + GG L++GIP +L + V+ + + + G+ K
Sbjct: 135 AGLQASVTLTHL-GYDVTIYEKQPQPGGWLRHGIPAFRLPQSVLDQEIARIVEMGVNIKC 193
Query: 105 NINVGKDIA 113
N VG ++
Sbjct: 194 NCEVGGSLS 202
>POMBASE|SPBC3B8.01c [details] [associations]
symbol:arh1 "NADPH-adrenodoxin reductase Arh1"
species:4896 "Schizosaccharomyces pombe" [GO:0004324
"ferredoxin-NADP+ reductase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0005759 "mitochondrial matrix"
evidence=IEA] [GO:0006879 "cellular iron ion homeostasis"
evidence=ISO] [GO:0015039 "NADPH-adrenodoxin reductase activity"
evidence=IDA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IDA]
[GO:0050661 "NADP binding" evidence=IDA] InterPro:IPR021163
InterPro:IPR023753 Pfam:PF07992 PIRSF:PIRSF000362
InterPro:IPR016040 PomBase:SPBC3B8.01c GO:GO:0005743
Gene3D:3.40.50.720 GO:GO:0050660 GO:GO:0005759 GO:GO:0050661
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006879 GO:GO:0022900
eggNOG:COG0493 HOGENOM:HOG000249250 KO:K00528 GO:GO:0004324
OMA:GWQRIDK GO:GO:0015039 PIR:T40339 RefSeq:NP_596413.1 HSSP:O05783
ProteinModelPortal:O59710 STRING:O59710 EnsemblFungi:SPBC3B8.01c.1
GeneID:2541049 KEGG:spo:SPBC3B8.01c OrthoDB:EOG4TQQJR
NextBio:20802163 Uniprot:O59710
Length = 469
Score = 166 (63.5 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 133 LIVNIVGHSVTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGK 191
L+ N + +FE GL++YG+ P K V + ++ + F N+NVG
Sbjct: 35 LLRNDPNVKIDMFESRPVPFGLVRYGVAPDHPEVKHVEHKFSEIAESTQFRFLGNVNVGT 94
Query: 192 DIAAKELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPIS 251
D++ ++L + +D L+L GA + L IPG LSG+Y A + W N+N+
Sbjct: 95 DVSLRDLTKNYDCLVLAYGAAGDKRLGIPGEDLSGVYSAREVV-GWYNSDPRNQNLELDL 153
Query: 252 AKDKNVIVIGGGDTGCD 268
++ ++ +VIG G+ D
Sbjct: 154 SQVEDAVVIGHGNVSLD 170
>UNIPROTKB|J3QKZ8 [details] [associations]
symbol:FDXR "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AC068874 HGNC:HGNC:3642
Ensembl:ENST00000579893 Uniprot:J3QKZ8
Length = 164
Score = 140 (54.3 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + + F N+ VG+D+ EL E
Sbjct: 14 VDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVPELRE 73
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA R L IPG +L G+ A +F+ W N+ + P + D +++
Sbjct: 74 AYHAVVLSYGAEDHRALEIPGEELPGVCSARAFV-GWYNGLPENQELEPDLSCD-TAVIL 131
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 132 GQGNVALD 139
>WB|WBGene00013376 [details] [associations]
symbol:Y62E10A.6 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR021163
InterPro:IPR023753 Pfam:PF07992 PIRSF:PIRSF000362
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005759
eggNOG:COG0493 HOGENOM:HOG000249250 KO:K00528 GO:GO:0004324
GeneTree:ENSGT00390000013574 OMA:CHTSTPG HSSP:O05783 EMBL:AL132865
RefSeq:NP_502573.1 ProteinModelPortal:Q9U1X0 SMR:Q9U1X0
STRING:Q9U1X0 PaxDb:Q9U1X0 EnsemblMetazoa:Y62E10A.6.1
EnsemblMetazoa:Y62E10A.6.2 GeneID:178299 KEGG:cel:CELE_Y62E10A.6
UCSC:Y62E10A.6 CTD:178299 WormBase:Y62E10A.6 InParanoid:Q9U1X0
NextBio:900562 Uniprot:Q9U1X0
Length = 458
Score = 158 (60.7 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 42/132 (31%), Positives = 63/132 (47%)
Query: 141 SVTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAA--EGIEFKTNINVGKDIAAKE 197
SV VFE + GL++YG+ P + K V+ + E ++ N+N+G+DI E
Sbjct: 51 SVDVFENSPVPFGLVRYGVAPDHQEVKNVINTFDAMFEKNRERLKLFCNVNIGRDITFDE 110
Query: 198 LYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNV 257
L +DA+LL G+ R L IPG S + F+ W G N S NV
Sbjct: 111 LTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFV-GWYN---GVPNASTPDLTTSNV 166
Query: 258 IVIGGGDTGCDC 269
+++G G+ DC
Sbjct: 167 VIVGNGNVALDC 178
>UNIPROTKB|P76440 [details] [associations]
symbol:preT "NADH-dependent dihydropyrimidine dehydrogenase
subunit" species:83333 "Escherichia coli K-12" [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006208 "pyrimidine nucleobase catabolic
process" evidence=IDA] [GO:0003954 "NADH dehydrogenase activity"
evidence=IDA] [GO:0004159 "dihydrouracil dehydrogenase (NAD+)
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA;IDA] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001327
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 InterPro:IPR016040 Gene3D:3.40.50.720
GO:GO:0050660 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0051536 eggNOG:COG0493
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 GO:GO:0003954
GO:GO:0006208 SUPFAM:SSF46548 GO:GO:0004159 PIR:A64983
RefSeq:NP_416651.1 RefSeq:YP_490385.1 ProteinModelPortal:P76440
SMR:P76440 DIP:DIP-28055N IntAct:P76440
EnsemblBacteria:EBESCT00000002435 EnsemblBacteria:EBESCT00000016843
GeneID:12930175 GeneID:949049 KEGG:ecj:Y75_p2108 KEGG:eco:b2146
PATRIC:32119635 EchoBASE:EB3827 EcoGene:EG14074 OMA:SLKMTRE
ProtClustDB:PRK11749 BioCyc:EcoCyc:G7145-MONOMER
BioCyc:ECOL316407:JW2133-MONOMER BioCyc:MetaCyc:G7145-MONOMER
Genevestigator:P76440 Uniprot:P76440
Length = 412
Score = 150 (57.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 41/137 (29%), Positives = 74/137 (54%)
Query: 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKEL 198
G+ VT++E+ GG L+ GIP +L + V+ + + G+ K N VG + ++L
Sbjct: 147 GYDVTIYEKEAHPGGWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQL 206
Query: 199 YEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVI 258
E A+L+ G + LP+ + S + A+ FL+ ++ Q G+ ++ P SA +
Sbjct: 207 KAENRAVLVTVGLSSGSGLPL--FEHSDVEIAVDFLQRARQAQ-GDISI-PQSA-----L 257
Query: 259 VIGGGDTGCDCIATSLR 275
+IGGGD D +A++L+
Sbjct: 258 IIGGGDVAMD-VASTLK 273
>UNIPROTKB|F1RV70 [details] [associations]
symbol:FDXR "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9823 "Sus scrofa" [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR021163
PIRSF:PIRSF000362 InterPro:IPR016040 GO:GO:0005743 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005759 CTD:2232 KO:K00528 GO:GO:0004324
GeneTree:ENSGT00390000013574 OMA:ARSDRCA EMBL:CU640434
RefSeq:NP_001231656.1 UniGene:Ssc.43952 Ensembl:ENSSSCT00000018754
GeneID:100512919 KEGG:ssc:100512919 ArrayExpress:F1RV70
Uniprot:F1RV70
Length = 492
Score = 148 (57.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 36/128 (28%), Positives = 66/128 (51%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + ++ F N+ VG+D+ EL E
Sbjct: 66 VDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFHGNVVVGRDVTVPELQE 125
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA R L IPG +L G++ A +F+ W N+ ++P + D +++
Sbjct: 126 AYHAVVLSYGAEDHRALEIPGEELPGVFSARAFV-GWYNGLPENQELAPDLSCD-TAVIL 183
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 184 GQGNVALD 191
>WB|WBGene00016103 [details] [associations]
symbol:dpyd-1 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004152
"dihydroorotate dehydrogenase activity" evidence=IEA] [GO:0006222
"UMP biosynthetic process" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379 UniPathway:UPA00131
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0009055 GO:GO:0046872 GO:GO:0051539
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222
SUPFAM:SSF46548 HOGENOM:HOG000007797 KO:K00207 GO:GO:0004158
GO:GO:0017113 GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
EMBL:FO080672 PIR:T15616 RefSeq:NP_508927.2
ProteinModelPortal:Q18164 DIP:DIP-25332N MINT:MINT-1123364
STRING:Q18164 PaxDb:Q18164 EnsemblMetazoa:C25F6.3 GeneID:180818
KEGG:cel:CELE_C25F6.3 CTD:180818 WormBase:C25F6.3
GeneTree:ENSGT00500000044896 InParanoid:Q18164 OMA:PWPAVGI
NextBio:911096 Uniprot:Q18164
Length = 1059
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 54/213 (25%), Positives = 96/213 (45%)
Query: 70 VGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKVTNHTPQSDNQTKH 129
+GGL QY K Q V+ + ++ E + N N + P S +
Sbjct: 167 IGGLQQYACDVFK------QMNVRQIVSK--EVRENRNASHKEQVALIGCGPASIS---- 214
Query: 130 CPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189
C + + +T++E+ +GGL IP +L +VV ++L G++ +TN +
Sbjct: 215 CASFLARLGYTDITIYEKRAYIGGLSSAEIPQFRLPYDVVDFEIQLARDIGVQIETNRPL 274
Query: 190 GKD-IAAKELYEE-FDALLLCTGATWPRDLPI-PGRQL-SGIYFAMSFLESW---QKKQM 242
GKD + +L E+ A+ + G P+ P+ G + +G Y + ++L + K M
Sbjct: 275 GKDGLTLAKLKEQGAAAVFIGIGNPEPKIDPLFEGLTIENGFYTSKNYLPAVAAASKPGM 334
Query: 243 GNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275
+P+ V+V+G GDT DC ++LR
Sbjct: 335 CGCKRTPLPTMRGRVVVLGAGDTAMDCATSALR 367
>UNIPROTKB|Q18164 [details] [associations]
symbol:dpyd-1 "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:6239 "Caenorhabditis elegans" [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity" evidence=ISS]
[GO:0006214 "thymidine catabolic process" evidence=ISS] [GO:0006212
"uracil catabolic process" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0000166
GO:GO:0009055 GO:GO:0046872 GO:GO:0051539 eggNOG:COG0493
Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222 SUPFAM:SSF46548
HOGENOM:HOG000007797 KO:K00207 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 EMBL:FO080672
PIR:T15616 RefSeq:NP_508927.2 ProteinModelPortal:Q18164
DIP:DIP-25332N MINT:MINT-1123364 STRING:Q18164 PaxDb:Q18164
EnsemblMetazoa:C25F6.3 GeneID:180818 KEGG:cel:CELE_C25F6.3
CTD:180818 WormBase:C25F6.3 GeneTree:ENSGT00500000044896
InParanoid:Q18164 OMA:PWPAVGI NextBio:911096 Uniprot:Q18164
Length = 1059
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 54/213 (25%), Positives = 96/213 (45%)
Query: 70 VGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKVTNHTPQSDNQTKH 129
+GGL QY K Q V+ + ++ E + N N + P S +
Sbjct: 167 IGGLQQYACDVFK------QMNVRQIVSK--EVRENRNASHKEQVALIGCGPASIS---- 214
Query: 130 CPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189
C + + +T++E+ +GGL IP +L +VV ++L G++ +TN +
Sbjct: 215 CASFLARLGYTDITIYEKRAYIGGLSSAEIPQFRLPYDVVDFEIQLARDIGVQIETNRPL 274
Query: 190 GKD-IAAKELYEE-FDALLLCTGATWPRDLPI-PGRQL-SGIYFAMSFLESW---QKKQM 242
GKD + +L E+ A+ + G P+ P+ G + +G Y + ++L + K M
Sbjct: 275 GKDGLTLAKLKEQGAAAVFIGIGNPEPKIDPLFEGLTIENGFYTSKNYLPAVAAASKPGM 334
Query: 243 GNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275
+P+ V+V+G GDT DC ++LR
Sbjct: 335 CGCKRTPLPTMRGRVVVLGAGDTAMDCATSALR 367
>UNIPROTKB|Q46811 [details] [associations]
symbol:ygfK "predicted oxidoreductase, Fe-S subunit"
species:83333 "Escherichia coli K-12" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IDA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA;TAS] InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
InterPro:IPR023753 Pfam:PF07992 Pfam:PF13187 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 Gene3D:3.20.20.70 GO:GO:0005506
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016491 GO:GO:0051539 eggNOG:COG0493
Gene3D:1.10.1060.10 EMBL:U28375 SUPFAM:SSF46548 PIR:F65071
RefSeq:NP_417354.1 RefSeq:YP_491080.1 ProteinModelPortal:Q46811
SMR:Q46811 DIP:DIP-28091N IntAct:Q46811 PRIDE:Q46811
EnsemblBacteria:EBESCT00000000821 EnsemblBacteria:EBESCT00000015587
GeneID:12933331 GeneID:949068 KEGG:ecj:Y75_p2811 KEGG:eco:b2878
PATRIC:32121166 EchoBASE:EB2873 EcoGene:EG13061
HOGENOM:HOG000277437 KO:K12527 OMA:CPNRANI ProtClustDB:PRK09853
BioCyc:EcoCyc:G7497-MONOMER BioCyc:ECOL316407:JW5923-MONOMER
Genevestigator:Q46811 InterPro:IPR017701 TIGRFAMs:TIGR03315
Uniprot:Q46811
Length = 1032
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 37/138 (26%), Positives = 69/138 (50%)
Query: 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKEL 198
GH VT+FER GG+++ IP ++ E++Q + +AA G++F+ + D+ ++L
Sbjct: 573 GHPVTLFEREANAGGVVKNIIPQFRIPAELIQHDIDFVAAHGVKFEYGCS--PDLTIEQL 630
Query: 199 YEE-FDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNV 257
+ F +L+ TG + + G ++ ++ FL + K K+V
Sbjct: 631 KNQGFHYVLIATGTDKNSGVKLAGDN-QNVWKSLPFLREYNK--------GTALKLGKHV 681
Query: 258 IVIGGGDTGCDCIATSLR 275
+V+G G+T DC +LR
Sbjct: 682 VVVGAGNTAMDCARAALR 699
>RGD|621648 [details] [associations]
symbol:Fdxr "ferredoxin reductase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA;ISO] [GO:0005759 "mitochondrial matrix"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0015039 "NADPH-adrenodoxin reductase activity"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0070402
"NADPH binding" evidence=IDA] [GO:0070995 "NADPH oxidation"
evidence=IDA] InterPro:IPR021163 PIRSF:PIRSF000362
UniPathway:UPA00296 InterPro:IPR016040 RGD:621648 GO:GO:0005739
GO:GO:0005743 Gene3D:3.40.50.720 GO:GO:0005759 GO:GO:0008203
GO:GO:0022900 CTD:2232 eggNOG:COG0493 HOGENOM:HOG000249250
HOVERGEN:HBG002132 KO:K00528 OrthoDB:EOG44J2J3 GO:GO:0015039
GO:GO:0070402 GO:GO:0070995 EMBL:D63761 EMBL:BC088844
IPI:IPI00193379 RefSeq:NP_077067.1 UniGene:Rn.10860
ProteinModelPortal:P56522 SMR:P56522 STRING:P56522
PhosphoSite:P56522 PRIDE:P56522 GeneID:79122 KEGG:rno:79122
InParanoid:P56522 BioCyc:MetaCyc:MONOMER-14306 NextBio:614546
Genevestigator:P56522 GermOnline:ENSRNOG00000003387 Uniprot:P56522
Length = 494
Score = 144 (55.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 35/128 (27%), Positives = 67/128 (52%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + ++ F+ N+ VG+D++ EL E
Sbjct: 68 VDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFRGNVVVGRDVSVPELRE 127
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA + L IPG +L G+ A +F+ W N+ ++P + D +++
Sbjct: 128 AYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFV-GWYNGLPENQKLAPDLSCD-TAVIL 185
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 186 GQGNVALD 193
>UNIPROTKB|P56522 [details] [associations]
symbol:Fdxr "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:10116 "Rattus norvegicus" [GO:0005759
"mitochondrial matrix" evidence=IEA] InterPro:IPR021163
PIRSF:PIRSF000362 UniPathway:UPA00296 InterPro:IPR016040 RGD:621648
GO:GO:0005739 GO:GO:0005743 Gene3D:3.40.50.720 GO:GO:0005759
GO:GO:0008203 GO:GO:0022900 CTD:2232 eggNOG:COG0493
HOGENOM:HOG000249250 HOVERGEN:HBG002132 KO:K00528 OrthoDB:EOG44J2J3
GO:GO:0015039 GO:GO:0070402 GO:GO:0070995 EMBL:D63761 EMBL:BC088844
IPI:IPI00193379 RefSeq:NP_077067.1 UniGene:Rn.10860
ProteinModelPortal:P56522 SMR:P56522 STRING:P56522
PhosphoSite:P56522 PRIDE:P56522 GeneID:79122 KEGG:rno:79122
InParanoid:P56522 BioCyc:MetaCyc:MONOMER-14306 NextBio:614546
Genevestigator:P56522 GermOnline:ENSRNOG00000003387 Uniprot:P56522
Length = 494
Score = 144 (55.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 35/128 (27%), Positives = 67/128 (52%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + ++ F+ N+ VG+D++ EL E
Sbjct: 68 VDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFRGNVVVGRDVSVPELRE 127
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA + L IPG +L G+ A +F+ W N+ ++P + D +++
Sbjct: 128 AYHAVVLSYGAEDHQPLEIPGEELPGVVSARAFV-GWYNGLPENQKLAPDLSCD-TAVIL 185
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 186 GQGNVALD 193
>UNIPROTKB|F1N6V9 [details] [associations]
symbol:LOC788912 "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9913 "Bos taurus" [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR021163 PIRSF:PIRSF000362 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005759 GO:GO:0004324
GeneTree:ENSGT00390000013574 EMBL:DAAA02049536 IPI:IPI00717291
Ensembl:ENSBTAT00000034683 ArrayExpress:F1N6V9 Uniprot:F1N6V9
Length = 488
Score = 143 (55.4 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 34/128 (26%), Positives = 67/128 (52%)
Query: 142 VTVFERNDRVGGLLQYGIPTMKLSK-EVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ T S+ V+ + ++ F N+ VG+D+ +EL +
Sbjct: 66 VDIYEKQLVPFGLVRFGVLTTPRSRWNVINTFTQTARSDRCAFYGNVEVGRDVTVQELRD 125
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA + L IPG +L G++ A +F+ W N ++P + D +++
Sbjct: 126 AYHAVVLSYGAEDHQALDIPGEELPGVFSARAFV-GWYNGLPENRELAPDLSCD-TAVIL 183
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 184 GQGNVALD 191
>UNIPROTKB|P08165 [details] [associations]
symbol:FDXR "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9913 "Bos taurus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=TAS]
[GO:0006694 "steroid biosynthetic process" evidence=TAS]
[GO:0055114 "oxidation-reduction process" evidence=IDA] [GO:0050661
"NADP binding" evidence=IDA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IDA] [GO:0004324 "ferredoxin-NADP+
reductase activity" evidence=TAS] [GO:0008203 "cholesterol
metabolic process" evidence=IEA] [GO:0005759 "mitochondrial matrix"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
InterPro:IPR021163 PIRSF:PIRSF000362 UniPathway:UPA00296
InterPro:IPR016040 GO:GO:0005739 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0050660 GO:GO:0005759 GO:GO:0050661 GO:GO:0008203
GO:GO:0022900 EMBL:M17029 EMBL:D00211 EMBL:X13736 EMBL:D83475
EMBL:BT021817 IPI:IPI00697194 IPI:IPI00698450 PIR:JT0751
RefSeq:NP_777116.1 UniGene:Bt.64647 PDB:1CJC PDB:1E1K PDB:1E1L
PDB:1E1M PDB:1E1N PDB:1E6E PDBsum:1CJC PDBsum:1E1K PDBsum:1E1L
PDBsum:1E1M PDBsum:1E1N PDBsum:1E6E ProteinModelPortal:P08165
SMR:P08165 IntAct:P08165 STRING:P08165 GeneID:282604
KEGG:bta:282604 CTD:2232 eggNOG:COG0493 HOGENOM:HOG000249250
HOVERGEN:HBG002132 InParanoid:P08165 KO:K00528 OrthoDB:EOG44J2J3
SABIO-RK:P08165 EvolutionaryTrace:P08165 NextBio:20806310
GO:GO:0004324 Uniprot:P08165
Length = 492
Score = 143 (55.4 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 34/128 (26%), Positives = 66/128 (51%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + ++ F N+ VG+D+ +EL +
Sbjct: 66 VDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVGRDVTVQELQD 125
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA + L IPG +L G++ A +F+ W N ++P + D +++
Sbjct: 126 AYHAVVLSYGAEDHQALDIPGEELPGVFSARAFV-GWYNGLPENRELAPDLSCD-TAVIL 183
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 184 GQGNVALD 191
>MGI|MGI:104724 [details] [associations]
symbol:Fdxr "ferredoxin reductase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004324 "ferredoxin-NADP+ reductase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008202 "steroid metabolic process" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0015039 "NADPH-adrenodoxin reductase activity" evidence=ISO]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0022900
"electron transport chain" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0070402 "NADPH
binding" evidence=ISO] [GO:0070995 "NADPH oxidation" evidence=ISO]
InterPro:IPR021163 PIRSF:PIRSF000362 UniPathway:UPA00296
InterPro:IPR016040 MGI:MGI:104724 GO:GO:0005743 Gene3D:3.40.50.720
GO:GO:0005759 GO:GO:0008203 GO:GO:0022900 CTD:2232 eggNOG:COG0493
HOVERGEN:HBG002132 KO:K00528 OrthoDB:EOG44J2J3 GO:GO:0015039
GeneTree:ENSGT00390000013574 EMBL:D49920 IPI:IPI00453981 PIR:S60028
RefSeq:NP_032023.1 UniGene:Mm.4719 ProteinModelPortal:Q61578
SMR:Q61578 STRING:Q61578 PhosphoSite:Q61578
REPRODUCTION-2DPAGE:Q61578 PaxDb:Q61578 PRIDE:Q61578
Ensembl:ENSMUST00000021078 GeneID:14149 KEGG:mmu:14149
InParanoid:Q61578 OMA:ARSDRCA NextBio:285258 Bgee:Q61578
CleanEx:MM_FDXR Genevestigator:Q61578 GermOnline:ENSMUSG00000018861
GO:GO:0070402 GO:GO:0070995 Uniprot:Q61578
Length = 494
Score = 142 (55.0 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 35/128 (27%), Positives = 67/128 (52%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + ++ F+ N+ VG+D++ EL E
Sbjct: 68 VDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFQGNVVVGRDVSVPELRE 127
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA + L IPG +L G+ A +F+ W N+ ++P + D +++
Sbjct: 128 AYHAVVLSYGAEDHQPLGIPGEELPGVVSARAFV-GWYNGLPENQELAPDLSCD-TAVIL 185
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 186 GQGNVALD 193
>UNIPROTKB|G3N2Y7 [details] [associations]
symbol:LOC788912 "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9913 "Bos taurus" [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR021163
PIRSF:PIRSF000362 InterPro:IPR016040 GO:GO:0005743 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005759 GO:GO:0004324
GeneTree:ENSGT00390000013574 OMA:ARSDRCA EMBL:DAAA02049536
Ensembl:ENSBTAT00000064838 Uniprot:G3N2Y7
Length = 498
Score = 142 (55.0 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 34/128 (26%), Positives = 66/128 (51%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + ++ F N+ VG+D+ +EL +
Sbjct: 66 VDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVGRDVTVQELRD 125
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA + L IPG +L G++ A +F+ W N ++P + D +++
Sbjct: 126 AYHAVVLSYGAEDHQALDIPGEELPGVFSARAFV-GWYNGLPENRELAPDLSCD-TAVIL 183
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 184 GQGNVALD 191
>UNIPROTKB|G3V0F2 [details] [associations]
symbol:FDXR "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] InterPro:IPR021163 PIRSF:PIRSF000362
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491
EMBL:CH471099 EMBL:AC068874 UniGene:Hs.69745 HGNC:HGNC:3642
ProteinModelPortal:G3V0F2 SMR:G3V0F2 Ensembl:ENST00000455107
ArrayExpress:G3V0F2 Bgee:G3V0F2 Uniprot:G3V0F2
Length = 381
Score = 140 (54.3 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + + F N+ VG+D+ EL E
Sbjct: 21 VDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVPELRE 80
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA R L IPG +L G+ A +F+ W N+ + P + D +++
Sbjct: 81 AYHAVVLSYGAEDHRALEIPGEELPGVCSARAFV-GWYNGLPENQELEPDLSCD-TAVIL 138
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 139 GQGNVALD 146
>FB|FBgn0015582 [details] [associations]
symbol:dare "defective in the avoidance of repellents"
species:7227 "Drosophila melanogaster" [GO:0042331 "phototaxis"
evidence=NAS] [GO:0006694 "steroid biosynthetic process"
evidence=IEP;IDA;NAS] [GO:0042048 "olfactory behavior"
evidence=IMP;NAS] [GO:0042810 "pheromone metabolic process"
evidence=NAS] [GO:0015039 "NADPH-adrenodoxin reductase activity"
evidence=ISS;NAS] [GO:0007619 "courtship behavior" evidence=NAS]
[GO:0007591 "molting cycle, chitin-based cuticle" evidence=NAS;IMP]
[GO:0035073 "pupariation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=NAS;IDA] [GO:0007552 "metamorphosis" evidence=IMP]
[GO:0004324 "ferredoxin-NADP+ reductase activity" evidence=NAS]
[GO:0009055 "electron carrier activity" evidence=ISS;NAS]
[GO:0005759 "mitochondrial matrix" evidence=ISS;NAS] [GO:0006707
"cholesterol catabolic process" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR021163 PIRSF:PIRSF000362
UniPathway:UPA00296 InterPro:IPR016040 EMBL:AE013599 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0005759
GO:GO:0016491 GO:GO:0008203 GO:GO:0022900 GO:GO:0007552
eggNOG:COG0493 KO:K00528 EMBL:AF168685 RefSeq:NP_477150.1
UniGene:Dm.3678 ProteinModelPortal:Q9V3T9 SMR:Q9V3T9 STRING:Q9V3T9
PaxDb:Q9V3T9 PRIDE:Q9V3T9 EnsemblMetazoa:FBtr0088176 GeneID:36203
KEGG:dme:Dmel_CG12390 CTD:36203 FlyBase:FBgn0015582
GeneTree:ENSGT00390000013574 InParanoid:Q9V3T9 OMA:CHTSTPG
OrthoDB:EOG4JWSVK PhylomeDB:Q9V3T9 GenomeRNAi:36203 NextBio:797327
Bgee:Q9V3T9 GermOnline:CG12390 GO:GO:0007591 GO:GO:0042048
GO:GO:0035073 Uniprot:Q9V3T9
Length = 466
Score = 141 (54.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 38/129 (29%), Positives = 65/129 (50%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V V E+ GL+++G+ P K V+ K + + NI++G D++ +EL +
Sbjct: 57 VDVVEKLPVPFGLVRFGVAPDHPEVKNVINTFTKTAEHPRLRYFGNISLGTDVSLRELRD 116
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSP-ISAKDKNVIV 259
+ A+LL GA R L + QL + A F+ +W G EN++P +S +D V +
Sbjct: 117 RYHAVLLTYGADQDRQLELENEQLDNVISARKFV-AWYNGLPGAENLAPDLSGRD--VTI 173
Query: 260 IGGGDTGCD 268
+G G+ D
Sbjct: 174 VGQGNVAVD 182
>UNIPROTKB|F1NRB1 [details] [associations]
symbol:FDXR "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR021163 PIRSF:PIRSF000362 InterPro:IPR016040
GO:GO:0005743 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005759
GO:GO:0004324 GeneTree:ENSGT00390000013574 OMA:ARSDRCA
EMBL:AADN02053641 EMBL:AADN02053639 EMBL:AADN02053640
IPI:IPI00810652 Ensembl:ENSGALT00000012583 Uniprot:F1NRB1
Length = 466
Score = 141 (54.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 35/128 (27%), Positives = 63/128 (49%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ ++ + N+ VG+D+ EL +
Sbjct: 39 VDIYEKLPVPFGLVRFGVAPDHPEVKNVINTFTHTARSDRCAYYGNVTVGRDVTVGELQQ 98
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA R L IPG LSG+Y A +F+ W N ++ P + +++
Sbjct: 99 AYHAVVLSYGAEDNRVLGIPGENLSGVYSARAFV-GWYNGLPENRDLKP-DLSCETALIL 156
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 157 GHGNVALD 164
>TAIR|locus:2127811 [details] [associations]
symbol:AT4G32360 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009055 "electron carrier
activity" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR021163 PIRSF:PIRSF000362 InterPro:IPR016040
GO:GO:0005886 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005759 HOGENOM:HOG000249250 KO:K00528
GO:GO:0004324 HSSP:P08165 OMA:ARSDRCA BRENDA:2.8.1.6 EMBL:AY074927
EMBL:AB075740 IPI:IPI00518147 RefSeq:NP_194962.2 UniGene:At.2031
ProteinModelPortal:Q8W3L1 SMR:Q8W3L1 STRING:Q8W3L1 PRIDE:Q8W3L1
EnsemblPlants:AT4G32360.1 GeneID:829370 KEGG:ath:AT4G32360
TAIR:At4g32360 InParanoid:Q8W3L1 PhylomeDB:Q8W3L1
ProtClustDB:PLN02852 Genevestigator:Q8W3L1 Uniprot:Q8W3L1
Length = 483
Score = 141 (54.7 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 37/138 (26%), Positives = 64/138 (46%)
Query: 139 GHSVTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKE 197
G V + +R GL++ G+ P +K + + ++ E F N+ +G D++ E
Sbjct: 46 GAHVDIIDRLPTPFGLVRSGVAPDHPETKIAINQFSRVAQHERCSFIGNVKLGSDLSLSE 105
Query: 198 LYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNV 257
L + + ++L GA +DL IPG LSGIY A F+ W ++ P +
Sbjct: 106 LRDLYHVVVLAYGAESDKDLGIPGESLSGIYSAREFVW-WYNGHPDYSSLKPDLKTSDSA 164
Query: 258 IVIGGGDTGCDCIATSLR 275
+++G G+ D LR
Sbjct: 165 VILGQGNVALDVARILLR 182
>UNIPROTKB|B7Z7G2 [details] [associations]
symbol:FDXR "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
InterPro:IPR021163 PIRSF:PIRSF000362 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005759 CTD:2232
HOVERGEN:HBG002132 KO:K00528 GO:GO:0004324 EMBL:AC068874
IPI:IPI00026958 UniGene:Hs.69745 GeneID:2232 KEGG:hsa:2232
HGNC:HGNC:3642 EMBL:AK301977 RefSeq:NP_001244945.1 SMR:B7Z7G2
STRING:B7Z7G2 Ensembl:ENST00000544854 UCSC:uc010wri.2
Uniprot:B7Z7G2
Length = 439
Score = 140 (54.3 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + + F N+ VG+D+ EL E
Sbjct: 13 VDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVPELRE 72
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA R L IPG +L G+ A +F+ W N+ + P + D +++
Sbjct: 73 AYHAVVLSYGAEDHRALEIPGEELPGVCSARAFV-GWYNGLPENQELEPDLSCD-TAVIL 130
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 131 GQGNVALD 138
>UNIPROTKB|J3QQX3 [details] [associations]
symbol:FDXR "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
InterPro:IPR021163 PIRSF:PIRSF000362 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005759 GO:GO:0004324
EMBL:AC068874 HGNC:HGNC:3642 ProteinModelPortal:J3QQX3
Ensembl:ENST00000583917 Uniprot:J3QQX3
Length = 463
Score = 140 (54.3 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + + F N+ VG+D+ EL E
Sbjct: 66 VDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVPELRE 125
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA R L IPG +L G+ A +F+ W N+ + P + D +++
Sbjct: 126 AYHAVVLSYGAEDHRALEIPGEELPGVCSARAFV-GWYNGLPENQELEPDLSCD-TAVIL 183
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 184 GQGNVALD 191
>UNIPROTKB|P22570 [details] [associations]
symbol:FDXR "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9606 "Homo sapiens" [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0015039 "NADPH-adrenodoxin reductase
activity" evidence=IEA] [GO:0070402 "NADPH binding" evidence=IEA]
[GO:0070995 "NADPH oxidation" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0008203 "cholesterol
metabolic process" evidence=IEA] [GO:0004324 "ferredoxin-NADP+
reductase activity" evidence=TAS] [GO:0005739 "mitochondrion"
evidence=TAS] [GO:0006091 "generation of precursor metabolites and
energy" evidence=TAS] [GO:0055114 "oxidation-reduction process"
evidence=TAS] [GO:0006694 "steroid biosynthetic process"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR021163 PIRSF:PIRSF000362
UniPathway:UPA00296 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0005759 GO:GO:0016491
GO:GO:0008203 GO:GO:0006091 GO:GO:0022900 CTD:2232 eggNOG:COG0493
HOGENOM:HOG000249250 HOVERGEN:HBG002132 KO:K00528 OrthoDB:EOG44J2J3
GO:GO:0004324 EMBL:J03826 EMBL:M58509 EMBL:M58508 EMBL:DQ085780
EMBL:AK295307 EMBL:AC068874 EMBL:BC002960 IPI:IPI00026958
IPI:IPI00221118 PIR:A40487 RefSeq:NP_001244941.1
RefSeq:NP_001244942.1 RefSeq:NP_001244943.1 RefSeq:NP_001244944.1
RefSeq:NP_004101.2 RefSeq:NP_077728.2 UniGene:Hs.69745
ProteinModelPortal:P22570 SMR:P22570 IntAct:P22570 STRING:P22570
PhosphoSite:P22570 DMDM:85681283 REPRODUCTION-2DPAGE:IPI00026958
PaxDb:P22570 PeptideAtlas:P22570 PRIDE:P22570 DNASU:2232
Ensembl:ENST00000293195 Ensembl:ENST00000442102
Ensembl:ENST00000581530 GeneID:2232 KEGG:hsa:2232 UCSC:uc002jlw.3
UCSC:uc002jlx.3 GeneCards:GC17M072858 HGNC:HGNC:3642 HPA:CAB008597
MIM:103270 neXtProt:NX_P22570 PharmGKB:PA28086 InParanoid:P22570
OMA:KRVEALC BioCyc:MetaCyc:HS08587-MONOMER GenomeRNAi:2232
NextBio:9037 ArrayExpress:P22570 Bgee:P22570 CleanEx:HS_FDXR
Genevestigator:P22570 GermOnline:ENSG00000161513 Uniprot:P22570
Length = 491
Score = 140 (54.3 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + + F N+ VG+D+ EL E
Sbjct: 65 VDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVPELRE 124
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA R L IPG +L G+ A +F+ W N+ + P + D +++
Sbjct: 125 AYHAVVLSYGAEDHRALEIPGEELPGVCSARAFV-GWYNGLPENQELEPDLSCD-TAVIL 182
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 183 GQGNVALD 190
>UNIPROTKB|E7EQC1 [details] [associations]
symbol:FDXR "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
InterPro:IPR021163 PIRSF:PIRSF000362 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005759 CTD:2232 KO:K00528
GO:GO:0004324 EMBL:AC068874 RefSeq:NP_001244942.1 UniGene:Hs.69745
GeneID:2232 KEGG:hsa:2232 HGNC:HGNC:3642 IPI:IPI00910128
ProteinModelPortal:E7EQC1 SMR:E7EQC1 Ensembl:ENST00000413947
UCSC:uc010wrk.2 ArrayExpress:E7EQC1 Bgee:E7EQC1 Uniprot:E7EQC1
Length = 522
Score = 140 (54.3 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + + F N+ VG+D+ EL E
Sbjct: 96 VDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVPELRE 155
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA R L IPG +L G+ A +F+ W N+ + P + D +++
Sbjct: 156 AYHAVVLSYGAEDHRALEIPGEELPGVCSARAFV-GWYNGLPENQELEPDLSCD-TAVIL 213
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 214 GQGNVALD 221
>TIGR_CMR|SPO_1776 [details] [associations]
symbol:SPO_1776 "pyridine nucleotide-disulphide
oxidoreductase family protein" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0008152 "metabolic process" evidence=ISS] [GO:0015036
"disulfide oxidoreductase activity" evidence=ISS]
InterPro:IPR000103 InterPro:IPR001327 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR013027 InterPro:IPR023753
Pfam:PF00070 Pfam:PF07992 PRINTS:PR00368 PRINTS:PR00469
InterPro:IPR016040 Gene3D:3.40.50.720 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0050660 GO:GO:0016491 GO:GO:0051536
HOGENOM:HOG000031439 Gene3D:1.10.1060.10 SUPFAM:SSF46548 KO:K00266
ProtClustDB:PRK11749 RefSeq:YP_167013.1 ProteinModelPortal:Q5LSJ2
GeneID:3193113 KEGG:sil:SPO1776 PATRIC:23376877 OMA:PKPGGLN
Uniprot:Q5LSJ2
Length = 445
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/138 (28%), Positives = 62/138 (44%)
Query: 137 IVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVK-LLAAEGIEFKTNINVGKDIAA 195
++GH V + E + GGL ++GI K + V LL GI + +G+ +
Sbjct: 164 LLGHDVVIHEARPKAGGLNEFGIAAYKATGGFAGTEVDWLLQIGGITVEQGSALGQGLTL 223
Query: 196 KELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDK 255
L +DA+ L G L G G+ A+ F+ + +Q G+ + P+ +
Sbjct: 224 DALRAGYDAVFLSIGLAGVNALRAAGEDKDGVRDAVDFIA--ELRQAGDLSALPVG---R 278
Query: 256 NVIVIGGGDTGCDCIATS 273
NV+VIGGG T D S
Sbjct: 279 NVVVIGGGMTAIDAAVQS 296
>UNIPROTKB|F1N549 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9913 "Bos taurus" [GO:0006214 "thymidine catabolic process"
evidence=IEA] [GO:0006212 "uracil catabolic process" evidence=IEA]
[GO:0006210 "thymine catabolic process" evidence=IEA] [GO:0006145
"purine nucleobase catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005829 Gene3D:3.20.20.70 GO:GO:0009055
GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006145 GO:GO:0006222
SUPFAM:SSF46548 IPI:IPI00707298 UniGene:Bt.2424 GO:GO:0004158
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
GeneTree:ENSGT00500000044896 OMA:PWPAVGI GO:GO:0006210
EMBL:DAAA02007797 EMBL:DAAA02007798 EMBL:DAAA02007799
EMBL:DAAA02007800 EMBL:DAAA02007801 EMBL:DAAA02007802
EMBL:DAAA02007803 EMBL:DAAA02007804 EMBL:DAAA02007805
EMBL:DAAA02007806 EMBL:DAAA02007807 EMBL:DAAA02007808
EMBL:DAAA02007809 ProteinModelPortal:F1N549
Ensembl:ENSBTAT00000007139 ArrayExpress:F1N549 Uniprot:F1N549
Length = 1025
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 44/152 (28%), Positives = 69/152 (45%)
Query: 130 CPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189
C + + + +T+FE+ + VGGL IP +L +VV ++L+ G++ ++
Sbjct: 202 CASFLARLGYNDITIFEKQEYVGGLSTSEIPQFRLPHDVVNFEIELMKDLGVKIICGKSL 261
Query: 190 G-KDIAAKELYEE-FDALLLCTGATWPR-DLPIPG-RQLSGIYFAMSFLESWQKKQMGNE 245
DI L EE + A + G P+ D G Q G Y + FL K
Sbjct: 262 SVNDITLSTLKEEGYKAAFIGIGLPEPKKDHIFQGLTQDQGFYTSKDFLPLVAKSSKAGM 321
Query: 246 NV--SPISAKDKNVIVIGGGDTGCDCIATSLR 275
SP+ + VIV+G GDT DC ++LR
Sbjct: 322 CACHSPLLSIRGTVIVLGAGDTAFDCATSALR 353
>UNIPROTKB|E2RDC3 [details] [associations]
symbol:FDXR "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9615 "Canis lupus familiaris" [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR021163 PIRSF:PIRSF000362 InterPro:IPR016040
GO:GO:0005743 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005759
CTD:2232 KO:K00528 GO:GO:0004324 GeneTree:ENSGT00390000013574
OMA:ARSDRCA EMBL:AAEX03006304 RefSeq:XP_533117.2
Ensembl:ENSCAFT00000007472 GeneID:475910 KEGG:cfa:475910
Uniprot:E2RDC3
Length = 492
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 35/128 (27%), Positives = 64/128 (50%)
Query: 142 VTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYE 200
V ++E+ GL+++G+ P K V+ + + F N+ VG+D+A EL
Sbjct: 66 VDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSGRCAFHGNVVVGRDVAVPELQA 125
Query: 201 EFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVI 260
+ A++L GA + L IPG +L G++ A +F+ W N ++P + D +++
Sbjct: 126 AYHAVVLSYGAEDHQALEIPGEELPGVFSARAFV-GWYNGLPENRELAPDLSCD-TAVIL 183
Query: 261 GGGDTGCD 268
G G+ D
Sbjct: 184 GQGNVALD 191
>UNIPROTKB|Q28007 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9913 "Bos taurus" [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISS;IDA] [GO:0006214
"thymidine catabolic process" evidence=ISS] [GO:0006212 "uracil
catabolic process" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0050661 "NADP binding" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=IDA] [GO:0019483
"beta-alanine biosynthetic process" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
InterPro:IPR001450 InterPro:IPR005720 InterPro:IPR009051
InterPro:IPR012135 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379
UniPathway:UPA00131 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005737 GO:GO:0042803 Gene3D:3.20.20.70 GO:GO:0009055
GO:GO:0046872 GO:GO:0050661 GO:GO:0051539 eggNOG:COG0493
Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222 SUPFAM:SSF46548
EMBL:U20981 IPI:IPI00707298 PIR:A44626 RefSeq:NP_776466.1
UniGene:Bt.2424 ProteinModelPortal:Q28007 SMR:Q28007 STRING:Q28007
PRIDE:Q28007 GeneID:281124 KEGG:bta:281124 CTD:1806
HOGENOM:HOG000007797 HOVERGEN:HBG004351 InParanoid:Q28007 KO:K00207
OrthoDB:EOG44J2H8 NextBio:20805192 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 Uniprot:Q28007
Length = 1025
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 43/152 (28%), Positives = 69/152 (45%)
Query: 130 CPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189
C + + + +T+FE+ + VGG+ IP +L +VV ++L+ G++ ++
Sbjct: 202 CASFLARLGYNDITIFEKQEYVGGISTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSL 261
Query: 190 G-KDIAAKELYEE-FDALLLCTGATWPR-DLPIPG-RQLSGIYFAMSFLESWQKKQMGNE 245
DI L EE + A + G P+ D G Q G Y + FL K
Sbjct: 262 SVNDITLSTLKEEGYKAAFIGIGLPEPKKDHIFQGLTQDQGFYTSKDFLPLVAKSSKAGM 321
Query: 246 NV--SPISAKDKNVIVIGGGDTGCDCIATSLR 275
SP+ + VIV+G GDT DC ++LR
Sbjct: 322 CACHSPLLSIRGTVIVLGAGDTAFDCATSALR 353
>FB|FBgn0086450 [details] [associations]
symbol:su(r) "suppressor of rudimentary" species:7227
"Drosophila melanogaster" [GO:0004159 "dihydrouracil dehydrogenase
(NAD+) activity" evidence=TAS] [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISS;NAS] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0006222 "UMP
biosynthetic process" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process"
evidence=IGI] InterPro:IPR001295 InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS00912 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0009055 GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006207
GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158 TIGRFAMs:TIGR01037
eggNOG:COG0167 EMBL:DQ027826 ProteinModelPortal:Q4TWT4 SMR:Q4TWT4
STRING:Q4TWT4 PaxDb:Q4TWT4 PRIDE:Q4TWT4 FlyBase:FBgn0086450
InParanoid:Q4TWT4 OrthoDB:EOG451C5K ArrayExpress:Q4TWT4 Bgee:Q4TWT4
Uniprot:Q4TWT4
Length = 1031
Score = 138 (53.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 45/154 (29%), Positives = 72/154 (46%)
Query: 130 CPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189
C + + VT++ER +GGL IP +L + V + L+ G+ +T ++
Sbjct: 199 CATFLARLGYRDVTIYERRSYLGGLSAAEIPQYRLPIDAVNFEIDLVRDLGVRIETGRSL 258
Query: 190 G-KDIAAKELYEE-FDALLLCTGATWPRDLPI-PGRQLS-GIYFAMSFL---ESWQKKQM 242
G KD+ + L DA+ + G P+ PI G Q S G Y + +FL K +
Sbjct: 259 GTKDLTIQGLLSTGHDAVFVGIGLPEPKLNPIFAGLQPSNGFYTSKNFLPLVSDGSKPGL 318
Query: 243 -GNENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275
+ + + NVIV+G GDT DC ++LR
Sbjct: 319 CACKAAAGLPKLHGNVIVLGAGDTAFDCATSALR 352
>DICTYBASE|DDB_G0267966 [details] [associations]
symbol:pyd1 "dihydropyrimidine dehydrogenase"
species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0004152 "dihydroorotate dehydrogenase activity" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity"
evidence=IEA;ISS] [GO:0006214 "thymidine catabolic process"
evidence=ISS] [GO:0006212 "uracil catabolic process" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0019483 "beta-alanine
biosynthetic process" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF12838 PROSITE:PS51379 UniPathway:UPA00131
InterPro:IPR017900 dictyBase:DDB_G0267966 Prosite:PS00198
GO:GO:0005737 GenomeReviews:CM000150_GR Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0009055 GO:GO:0046872 EMBL:AAFI02000003
GO:GO:0051539 Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222
SUPFAM:SSF46548 KO:K00207 GO:GO:0004158 GO:GO:0017113 GO:GO:0006214
GO:GO:0006212 TIGRFAMs:TIGR01037 OMA:PWPAVGI HSSP:Q28943
eggNOG:COG0167 EMBL:AF545064 RefSeq:XP_647452.1
ProteinModelPortal:Q55FT1 SMR:Q55FT1 STRING:Q55FT1
EnsemblProtists:DDB0231100 GeneID:8616259 KEGG:ddi:DDB_G0267966
ProtClustDB:CLSZ2431542 Uniprot:Q55FT1
Length = 1009
Score = 137 (53.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 41/145 (28%), Positives = 74/145 (51%)
Query: 138 VGHS-VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKD-IAA 195
+G++ VT+FE+ +GGL IP +L+ EVV+ +KL+ G++ + +G++
Sbjct: 208 LGYTDVTIFEKEQYLGGLSSSEIPNYRLNYEVVEFEIKLMKDLGVKVEYGKRLGENGFTV 267
Query: 196 KELYEE-FDALLLCTGATWPRDLPIPGRQLS--GIYFAMSFLESWQK-KQMGNENV-SPI 250
+ L ++ ++A+ L G P+ P+ S G + + FL K + G S +
Sbjct: 268 ESLQKQGYEAIYLGIGMPEPKIDPVFNELTSDQGFFSSKEFLPKVSKASKAGMCGCKSQL 327
Query: 251 SAKDKNVIVIGGGDTGCDCIATSLR 275
+ VIV+G GDT DC ++ R
Sbjct: 328 PQLNGRVIVLGAGDTAFDCATSAFR 352
>ZFIN|ZDB-GENE-040426-2459 [details] [associations]
symbol:dpydb "dihydropyrimidine dehydrogenase b"
species:7955 "Danio rerio" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004152 "dihydroorotate
dehydrogenase activity" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0017113 "dihydropyrimidine dehydrogenase (NADP+)
activity" evidence=IEA;ISS] [GO:0006212 "uracil catabolic process"
evidence=ISS] [GO:0006214 "thymidine catabolic process"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR001450
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
InterPro:IPR023753 Pfam:PF01180 Pfam:PF07992 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 ZFIN:ZDB-GENE-040426-2459 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0000166 GO:GO:0009055 GO:GO:0046872
GO:GO:0051539 Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006222
SUPFAM:SSF46548 HOGENOM:HOG000007797 HOVERGEN:HBG004351 KO:K00207
OrthoDB:EOG44J2H8 GO:GO:0004158 GO:GO:0017113 GO:GO:0006214
GO:GO:0006212 TIGRFAMs:TIGR01037 EMBL:BC066602 IPI:IPI00502639
RefSeq:NP_998058.1 UniGene:Dr.161770 HSSP:Q28943
ProteinModelPortal:Q6NYG8 SMR:Q6NYG8 STRING:Q6NYG8 PRIDE:Q6NYG8
GeneID:405829 KEGG:dre:405829 CTD:405829 eggNOG:COG0167
InParanoid:Q6NYG8 NextBio:20817792 ArrayExpress:Q6NYG8
Uniprot:Q6NYG8
Length = 1022
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 44/152 (28%), Positives = 70/152 (46%)
Query: 130 CPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189
C + + ++T+FE+ +GGL IP +L EVVQ + L+ G++ +
Sbjct: 202 CASFLARLGYDNITIFEKQKYIGGLSTSEIPQFRLPYEVVQFEIDLMKDLGVKVVLEKGL 261
Query: 190 GKD-IAAKELYEE-FDALLLCTGATWP-RDLPIPGRQLS-GIYFAMSFLESWQK-KQMGN 244
G++ + L EE + + + G RD G G Y + FL K ++G
Sbjct: 262 GQNGLTLTSLKEEGYQVVYIGIGLPQANRDKIFEGLTTEQGFYTSKDFLPLVAKASKIGM 321
Query: 245 ENV-SPISAKDKNVIVIGGGDTGCDCIATSLR 275
N S + NVIV+G GDT DC ++LR
Sbjct: 322 CNCRSQLPKLHGNVIVLGAGDTAFDCATSALR 353
>UNIPROTKB|E1C4J1 [details] [associations]
symbol:DPYD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR005720 InterPro:IPR009051
InterPro:IPR012135 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR017896 Pfam:PF01180 Pfam:PF13237 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006222 SUPFAM:SSF46548
GO:GO:0004158 TIGRFAMs:TIGR01037 GeneTree:ENSGT00500000044896
EMBL:AADN02012893 EMBL:AADN02012894 EMBL:AADN02012895
IPI:IPI00597341 Ensembl:ENSGALT00000008842 ArrayExpress:E1C4J1
Uniprot:E1C4J1
Length = 950
Score = 136 (52.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 130 CPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189
C + + ++T+FE+ + VGGL IP +L +VV +L+ G++ + +
Sbjct: 126 CASFLARLGYSNITIFEKQEYVGGLSASEIPQFRLPYDVVNFEAELMKDLGVKIIYSKGL 185
Query: 190 GKD-IAAKELYEE-FDALLLCTGATWP-RDLPIPGRQLS-GIYFAMSFLE--SWQKKQMG 243
D + + L E+ ++A+ + G P RD G ++ G Y + FL + K
Sbjct: 186 AVDGMTLRTLKEDGYEAVFIGIGLPEPNRDSVFQGLRMDQGFYTSKDFLPLVAVASKPGM 245
Query: 244 NENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275
SP+ + VIV+G GDT DC ++LR
Sbjct: 246 CACQSPLPSIHGTVIVLGAGDTAFDCATSALR 277
>UNIPROTKB|E1BRA0 [details] [associations]
symbol:DPYD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006145 "purine nucleobase catabolic process"
evidence=IEA] [GO:0006210 "thymine catabolic process" evidence=IEA]
[GO:0006212 "uracil catabolic process" evidence=IEA] [GO:0006214
"thymidine catabolic process" evidence=IEA] InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF13237
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005829
Gene3D:3.20.20.70 GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0006145
GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158 GO:GO:0006214
GO:GO:0006212 TIGRFAMs:TIGR01037 GeneTree:ENSGT00500000044896
OMA:PWPAVGI GO:GO:0006210 EMBL:AADN02012893 EMBL:AADN02012894
EMBL:AADN02012895 IPI:IPI00822678 ProteinModelPortal:E1BRA0
Ensembl:ENSGALT00000039100 ArrayExpress:E1BRA0 Uniprot:E1BRA0
Length = 951
Score = 136 (52.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 130 CPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189
C + + ++T+FE+ + VGGL IP +L +VV +L+ G++ + +
Sbjct: 126 CASFLARLGYSNITIFEKQEYVGGLSASEIPQFRLPYDVVNFEAELMKDLGVKIIYSKGL 185
Query: 190 GKD-IAAKELYEE-FDALLLCTGATWP-RDLPIPGRQLS-GIYFAMSFLE--SWQKKQMG 243
D + + L E+ ++A+ + G P RD G ++ G Y + FL + K
Sbjct: 186 AVDGMTLRTLKEDGYEAVFIGIGLPEPNRDSVFQGLRMDQGFYTSKDFLPLVAVASKPGM 245
Query: 244 NENVSPISAKDKNVIVIGGGDTGCDCIATSLR 275
SP+ + VIV+G GDT DC ++LR
Sbjct: 246 CACQSPLPSIHGTVIVLGAGDTAFDCATSALR 277
>UNIPROTKB|F1S550 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9823 "Sus scrofa" [GO:0006214 "thymidine catabolic process"
evidence=IEA] [GO:0006212 "uracil catabolic process" evidence=IEA]
[GO:0006210 "thymine catabolic process" evidence=IEA] [GO:0006145
"purine nucleobase catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0006222 "UMP biosynthetic process" evidence=IEA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 Pfam:PF13237 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005829 Gene3D:3.20.20.70 GO:GO:0051536
Gene3D:1.10.1060.10 GO:GO:0006145 GO:GO:0006222 SUPFAM:SSF46548
GO:GO:0004158 GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
GeneTree:ENSGT00500000044896 OMA:PWPAVGI GO:GO:0006210
EMBL:CU138571 EMBL:CU151845 EMBL:CU179627 EMBL:CU179674
EMBL:CU179711 EMBL:CU207270 EMBL:FP017306
Ensembl:ENSSSCT00000007532 Uniprot:F1S550
Length = 949
Score = 135 (52.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 130 CPPLIVNIVGHS-VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 188
C + + G+S +T+FE+ + VGGL IP +L +VV ++L+ G++ +
Sbjct: 126 CASFLARL-GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKS 184
Query: 189 VGK-DIAAKELYEE-FDALLLCTGATWPR-DLPIPG-RQLSGIYFAMSFLESWQKKQMGN 244
+ + +I L EE + A + G P+ D G Q G Y + FL K
Sbjct: 185 LSENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAG 244
Query: 245 ENV--SPISAKDKNVIVIGGGDTGCDCIATSLR 275
SP+ + VIV+G GDT DC ++LR
Sbjct: 245 MCACHSPLPSIRGAVIVLGAGDTAFDCATSALR 277
>UNIPROTKB|Q28943 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9823 "Sus scrofa" [GO:0010181 "FMN binding" evidence=IDA]
[GO:0017113 "dihydropyrimidine dehydrogenase (NADP+) activity"
evidence=ISS;IDA] [GO:0006214 "thymidine catabolic process"
evidence=ISS] [GO:0006212 "uracil catabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0050661 "NADP binding"
evidence=IDA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0019483 "beta-alanine biosynthetic process"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006222 "UMP biosynthetic process" evidence=IEA] [GO:0004158
"dihydroorotate oxidase activity" evidence=IEA] InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 PROSITE:PS51379
UniPathway:UPA00131 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005737 GO:GO:0042803 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0046872 GO:GO:0050661 GO:GO:0051539 Gene3D:1.10.1060.10
GO:GO:0019483 GO:GO:0010181 GO:GO:0006222 DrugBank:DB00544
SUPFAM:SSF46548 CTD:1806 HOGENOM:HOG000007797 HOVERGEN:HBG004351
KO:K00207 OrthoDB:EOG44J2H8 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 eggNOG:COG0167
EMBL:U09179 PIR:B54718 RefSeq:NP_999209.1 UniGene:Ssc.153 PDB:1GT8
PDB:1GTE PDB:1GTH PDB:1H7W PDB:1H7X PDBsum:1GT8 PDBsum:1GTE
PDBsum:1GTH PDBsum:1H7W PDBsum:1H7X ProteinModelPortal:Q28943
SMR:Q28943 STRING:Q28943 GeneID:397109 KEGG:ssc:397109
EvolutionaryTrace:Q28943 Uniprot:Q28943
Length = 1025
Score = 135 (52.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 130 CPPLIVNIVGHS-VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 188
C + + G+S +T+FE+ + VGGL IP +L +VV ++L+ G++ +
Sbjct: 202 CASFLARL-GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKS 260
Query: 189 VGK-DIAAKELYEE-FDALLLCTGATWPR-DLPIPG-RQLSGIYFAMSFLESWQKKQMGN 244
+ + +I L EE + A + G P+ D G Q G Y + FL K
Sbjct: 261 LSENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAG 320
Query: 245 ENV--SPISAKDKNVIVIGGGDTGCDCIATSLR 275
SP+ + VIV+G GDT DC ++LR
Sbjct: 321 MCACHSPLPSIRGAVIVLGAGDTAFDCATSALR 353
>UNIPROTKB|F1M412 [details] [associations]
symbol:F1M412 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004158 "dihydroorotate oxidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006222
"UMP biosynthetic process" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0009055 GO:GO:0051536 Gene3D:1.10.1060.10
GO:GO:0006222 SUPFAM:SSF46548 GO:GO:0004158 TIGRFAMs:TIGR01037
IPI:IPI00209289 Ensembl:ENSRNOT00000023229 ArrayExpress:F1M412
Uniprot:F1M412
Length = 950
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 130 CPPLIVNIVGHS-VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 188
C + + G+S +T+FE+ + VGGL IP +L +VV ++L+ G++ +
Sbjct: 125 CASFLARL-GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKS 183
Query: 189 VGKD-IAAKELYEE-FDALLLCTGATWPR-DLPIPG-RQLSGIYFAMSFLESWQKKQMGN 244
+ D + L E + A + G P+ D G Q+ G Y + FL K
Sbjct: 184 ISTDEMTLSTLKENGYKAAFIGIGLPEPKKDHIFQGLTQVQGFYTSKDFLPLVAKGSKPG 243
Query: 245 ENV--SPISAKDKNVIVIGGGDTGCDCIATSLR 275
SP+ + VIV+G GDT DC ++LR
Sbjct: 244 MCACHSPLPSVRGAVIVLGAGDTAFDCATSALR 276
>RGD|621218 [details] [associations]
symbol:Dpyd "dihydropyrimidine dehydrogenase" species:10116
"Rattus norvegicus" [GO:0002058 "uracil binding" evidence=IDA]
[GO:0004158 "dihydroorotate oxidase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;ISS] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006145 "purine nucleobase catabolic process"
evidence=ISO] [GO:0006208 "pyrimidine nucleobase catabolic process"
evidence=ISO;IDA;TAS] [GO:0006210 "thymine catabolic process"
evidence=ISO] [GO:0006212 "uracil catabolic process"
evidence=ISO;ISS] [GO:0006214 "thymidine catabolic process"
evidence=ISO;ISS] [GO:0006222 "UMP biosynthetic process"
evidence=IEA] [GO:0007584 "response to nutrient" evidence=IDA]
[GO:0007623 "circadian rhythm" evidence=IDA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISO;ISS;IDA] [GO:0019483
"beta-alanine biosynthetic process" evidence=IEA] [GO:0019860
"uracil metabolic process" evidence=IDA] [GO:0042493 "response to
drug" evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050661 "NADP binding" evidence=IDA] [GO:0051384 "response to
glucocorticoid stimulus" evidence=IEP] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=ISO] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 RGD:621218 GO:GO:0005829 GO:GO:0042803
Gene3D:3.20.20.70 GO:GO:0042493 GO:GO:0009055 GO:GO:0046872
GO:GO:0007623 GO:GO:0050661 GO:GO:0051384 GO:GO:0007584
GO:GO:0051539 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006222 SUPFAM:SSF46548 CTD:1806 HOVERGEN:HBG004351 KO:K00207
GO:GO:0004158 GO:GO:0017113 GO:GO:0006214 GO:GO:0006212
TIGRFAMs:TIGR01037 HSSP:Q28943 EMBL:D85035 IPI:IPI00209289
RefSeq:NP_112289.1 UniGene:Rn.158382 ProteinModelPortal:O89000
SMR:O89000 STRING:O89000 PhosphoSite:O89000 PRIDE:O89000
GeneID:81656 KEGG:rno:81656 UCSC:RGD:621218 InParanoid:O89000
BioCyc:MetaCyc:MONOMER-15405 SABIO-RK:O89000 NextBio:615210
Genevestigator:O89000 GO:GO:0002058 Uniprot:O89000
Length = 1025
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 130 CPPLIVNIVGHS-VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 188
C + + G+S +T+FE+ + VGGL IP +L +VV ++L+ G++ +
Sbjct: 202 CASFLARL-GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKS 260
Query: 189 VGKD-IAAKELYEE-FDALLLCTGATWPR-DLPIPG-RQLSGIYFAMSFLESWQKKQMGN 244
+ D + L E + A + G P+ D G Q+ G Y + FL K
Sbjct: 261 ISTDEMTLSTLKENGYKAAFIGIGLPEPKKDHIFQGLTQVQGFYTSKDFLPLVAKGSKPG 320
Query: 245 ENV--SPISAKDKNVIVIGGGDTGCDCIATSLR 275
SP+ + VIV+G GDT DC ++LR
Sbjct: 321 MCACHSPLPSVRGAVIVLGAGDTAFDCATSALR 353
>UNIPROTKB|O89000 [details] [associations]
symbol:Dpyd "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:10116 "Rattus norvegicus" [GO:0004158 "dihydroorotate
oxidase activity" evidence=IEA] [GO:0006222 "UMP biosynthetic
process" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 RGD:621218 GO:GO:0005829 GO:GO:0042803
Gene3D:3.20.20.70 GO:GO:0042493 GO:GO:0009055 GO:GO:0046872
GO:GO:0007623 GO:GO:0050661 GO:GO:0051384 GO:GO:0007584
GO:GO:0051539 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006222 SUPFAM:SSF46548 CTD:1806 HOVERGEN:HBG004351 KO:K00207
GO:GO:0004158 GO:GO:0017113 GO:GO:0006214 GO:GO:0006212
TIGRFAMs:TIGR01037 HSSP:Q28943 EMBL:D85035 IPI:IPI00209289
RefSeq:NP_112289.1 UniGene:Rn.158382 ProteinModelPortal:O89000
SMR:O89000 STRING:O89000 PhosphoSite:O89000 PRIDE:O89000
GeneID:81656 KEGG:rno:81656 UCSC:RGD:621218 InParanoid:O89000
BioCyc:MetaCyc:MONOMER-15405 SABIO-RK:O89000 NextBio:615210
Genevestigator:O89000 GO:GO:0002058 Uniprot:O89000
Length = 1025
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 130 CPPLIVNIVGHS-VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 188
C + + G+S +T+FE+ + VGGL IP +L +VV ++L+ G++ +
Sbjct: 202 CASFLARL-GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKS 260
Query: 189 VGKD-IAAKELYEE-FDALLLCTGATWPR-DLPIPG-RQLSGIYFAMSFLESWQKKQMGN 244
+ D + L E + A + G P+ D G Q+ G Y + FL K
Sbjct: 261 ISTDEMTLSTLKENGYKAAFIGIGLPEPKKDHIFQGLTQVQGFYTSKDFLPLVAKGSKPG 320
Query: 245 ENV--SPISAKDKNVIVIGGGDTGCDCIATSLR 275
SP+ + VIV+G GDT DC ++LR
Sbjct: 321 MCACHSPLPSVRGAVIVLGAGDTAFDCATSALR 353
>MGI|MGI:2139667 [details] [associations]
symbol:Dpyd "dihydropyrimidine dehydrogenase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0002058 "uracil binding" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004152 "dihydroorotate dehydrogenase
activity" evidence=IEA] [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006145 "purine
nucleobase catabolic process" evidence=ISO] [GO:0006208 "pyrimidine
nucleobase catabolic process" evidence=ISO;IDA] [GO:0006210
"thymine catabolic process" evidence=ISO] [GO:0006212 "uracil
catabolic process" evidence=ISO] [GO:0006214 "thymidine catabolic
process" evidence=ISO] [GO:0006222 "UMP biosynthetic process"
evidence=IEA] [GO:0007584 "response to nutrient" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=ISO] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0017113 "dihydropyrimidine
dehydrogenase (NADP+) activity" evidence=ISO;IDA] [GO:0019860
"uracil metabolic process" evidence=ISO] [GO:0042493 "response to
drug" evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050661 "NADP binding" evidence=ISO] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=ISO;IDA] InterPro:IPR001450 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 Pfam:PF12838
PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 MGI:MGI:2139667 GO:GO:0005829 Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0009055 GO:GO:0046872 GO:GO:0051539
Gene3D:1.10.1060.10 GO:GO:0019483 GO:GO:0006145 GO:GO:0006222
SUPFAM:SSF46548 CTD:1806 HOGENOM:HOG000007797 HOVERGEN:HBG004351
KO:K00207 OrthoDB:EOG44J2H8 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037
GeneTree:ENSGT00500000044896 OMA:PWPAVGI HSSP:Q28943 eggNOG:COG0167
GO:GO:0006210 EMBL:BC039699 IPI:IPI00229705 RefSeq:NP_740748.1
UniGene:Mm.27907 ProteinModelPortal:Q8CHR6 SMR:Q8CHR6 STRING:Q8CHR6
PhosphoSite:Q8CHR6 PaxDb:Q8CHR6 PRIDE:Q8CHR6
Ensembl:ENSMUST00000039177 GeneID:99586 KEGG:mmu:99586
UCSC:uc008rdh.1 InParanoid:Q8CHR6 NextBio:354029 Bgee:Q8CHR6
Genevestigator:Q8CHR6 Uniprot:Q8CHR6
Length = 1025
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/152 (27%), Positives = 69/152 (45%)
Query: 130 CPPLIVNIVGHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINV 189
C + + ++T+FE+ + VGGL IP +L +VV ++L+ G++ ++
Sbjct: 202 CASFLARLGYSNITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSL 261
Query: 190 GKD-IAAKELYEE-FDALLLCTGATWPR-DLPIPG-RQLSGIYFAMSFLESWQKKQMGNE 245
D + L E + A + G P+ D G Q+ G Y + FL K
Sbjct: 262 STDEMTLSSLKENGYRAAFIGIGLPEPKKDHIFQGLTQVQGFYTSKDFLPLVAKSSKTGM 321
Query: 246 NV--SPISAKDKNVIVIGGGDTGCDCIATSLR 275
SP+ + VIV+G GDT DC ++LR
Sbjct: 322 CACHSPLPSIRGAVIVLGAGDTAFDCATSALR 353
>DICTYBASE|DDB_G0287353 [details] [associations]
symbol:fdxr "adrenodoxin reductase" species:44689
"Dictyostelium discoideum" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA;IC] [GO:0015039
"NADPH-adrenodoxin reductase activity" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005759 "mitochondrial matrix"
evidence=IEA] InterPro:IPR021163 InterPro:IPR023753 Pfam:PF07992
PIRSF:PIRSF000362 InterPro:IPR016040 dictyBase:DDB_G0287353
GO:GO:0005743 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005759
GenomeReviews:CM000154_GR GO:GO:0022900 EMBL:AAFI02000100
eggNOG:COG0493 KO:K00528 RefSeq:XP_637256.1 HSSP:P08165
ProteinModelPortal:Q54KG7 STRING:Q54KG7 EnsemblProtists:DDB0234047
GeneID:8626086 KEGG:ddi:DDB_G0287353 OMA:GWQRIDK
ProtClustDB:CLSZ2430005 GO:GO:0015039 Uniprot:Q54KG7
Length = 515
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/140 (25%), Positives = 69/140 (49%)
Query: 141 SVTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEG--IEFKTNINVGKDIAAKE 197
++T+ E+ GL++ GI P + K+V K+L I+F N+++ KDI +
Sbjct: 68 NITILEKLPYPFGLVRSGISPDHQNEKKVKNTLEKVLLEHPHQIQFIGNVDIEKDIKFQY 127
Query: 198 LYEEFDALLLCTGATWPRDLPIPGR-QLSGIYFAMSFLESWQKKQMGNENVSPISAKDKN 256
+ + F A++L G + L IPG L +YFA F+ W + +++ ++N
Sbjct: 128 IKDNFHAVVLACGIEGDKKLGIPGELTLKNVYFAREFI-GWLNGNLKDQH-KQFDLSNEN 185
Query: 257 VIVIGGGDTGCDCIATSLRQ 276
+ ++G G+ D L++
Sbjct: 186 LAIVGQGNVALDVARLLLKK 205
>UNIPROTKB|O05783 [details] [associations]
symbol:fprA "NADPH-ferredoxin reductase FprA" species:1773
"Mycobacterium tuberculosis" [GO:0004324 "ferredoxin-NADP+
reductase activity" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0008860 "ferredoxin-NAD+ reductase activity"
evidence=IDA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0070401 "NADP+ binding" evidence=IDA]
InterPro:IPR021163 PIRSF:PIRSF000362 InterPro:IPR016040
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.40.50.720 GO:GO:0050660
EMBL:BX842582 eggNOG:COG0493 HOGENOM:HOG000249250 KO:K00528
GO:GO:0004324 OMA:ATEFVSW GO:GO:0070401 GO:GO:0008860 PIR:A70920
RefSeq:NP_217622.1 RefSeq:NP_337714.1 RefSeq:YP_006516569.1
PDB:1LQT PDB:1LQU PDB:2C7G PDBsum:1LQT PDBsum:1LQU PDBsum:2C7G
ProteinModelPortal:O05783 SMR:O05783 PRIDE:O05783
EnsemblBacteria:EBMYCT00000002003 EnsemblBacteria:EBMYCT00000071789
GeneID:13317913 GeneID:888839 GeneID:926712 KEGG:mtc:MT3189
KEGG:mtu:Rv3106 KEGG:mtv:RVBD_3106 PATRIC:18128780
TubercuList:Rv3106 ProtClustDB:CLSK872140 SABIO-RK:O05783
EvolutionaryTrace:O05783 Uniprot:O05783
Length = 456
Score = 124 (48.7 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 36/117 (30%), Positives = 52/117 (44%)
Query: 153 GLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYEEFDALLLCTGA 211
GL++ G+ P K + ++ K F N+ VG+ + EL E +DA++ GA
Sbjct: 47 GLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGA 106
Query: 212 TWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIGGGDTGCD 268
R L IPG L G A+ F+ W E VSP +VIG G+ D
Sbjct: 107 QSDRMLNIPGEDLPGSIAAVDFV-GWYNAHPHFEQVSP-DLSGARAVVIGNGNVALD 161
>TIGR_CMR|DET_0866 [details] [associations]
symbol:DET_0866 "hydrogenase subunit, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008901
"ferredoxin hydrogenase activity" evidence=ISS] [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0009375 "ferredoxin
hydrogenase complex" evidence=ISS] InterPro:IPR001268
InterPro:IPR012285 Pfam:PF00329 GO:GO:0051536 GO:GO:0008137
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0493
Gene3D:1.10.1060.10 RefSeq:YP_181592.1 ProteinModelPortal:Q3Z857
STRING:Q3Z857 GeneID:3229822 KEGG:det:DET0866 PATRIC:21608791
HOGENOM:HOG000275344 OMA:NIYLCAS ProtClustDB:CLSK837232
BioCyc:DETH243164:GJNF-867-MONOMER Uniprot:Q3Z857
Length = 461
Score = 124 (48.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 139 GHSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKEL 198
GH VTVFE + GG ++ GIP L ++++ ++ +A G+EFK V + KE+
Sbjct: 239 GHKVTVFEALPKAGGYMRVGIPEYALPRQILDAEIENVAKLGVEFKLGTAVNSLSSLKEM 298
Query: 199 YEEFDALLLCTGA 211
FDA LL GA
Sbjct: 299 --GFDATLLALGA 309
>TIGR_CMR|DET_0123 [details] [associations]
symbol:DET_0123 "pyridine nucleotide-disulphide
oxidoreductase family protein" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0008152 "metabolic process" evidence=ISS]
[GO:0015036 "disulfide oxidoreductase activity" evidence=ISS]
InterPro:IPR001450 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR023753 Pfam:PF00037 Pfam:PF07992
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0046872 GO:GO:0016491 GO:GO:0051539 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0493 Gene3D:1.10.1060.10
SUPFAM:SSF46548 RefSeq:YP_180873.1 ProteinModelPortal:Q3ZA76
STRING:Q3ZA76 GeneID:3230519 KEGG:det:DET0123 PATRIC:21607333
HOGENOM:HOG000275479 OMA:HEATIFE ProtClustDB:CLSK837616
BioCyc:DETH243164:GJNF-123-MONOMER Uniprot:Q3ZA76
Length = 643
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 47/187 (25%), Positives = 83/187 (44%)
Query: 82 KLSKEVVQRRVKLLAAEGIE--FKTNINVGKDIAAKVTNHTPQSDNQTKHCPPLIVNIVG 139
K + + R +K AAE + +K N+ + KV T + ++G
Sbjct: 172 KFDEPIAIRALKRYAAENDDGSWKNNLKIAPSTGKKVAIIGSGPAGLTS---AYFLTLLG 228
Query: 140 HSVTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELY 199
H T+FE + GG + Y IP +L K+++ + +K + G+ T+ V + + L
Sbjct: 229 HEATIFESMEYAGGKMFYSIPEHQLPKDILNKEIKAITDLGVTIHTSCQV-QSVQTL-LK 286
Query: 200 EEFDALLLCTGATWPRD---LPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKN 256
+ +D++LL TG + LP S + FL++ K E++ DK
Sbjct: 287 QGYDSVLLSTGVLGLDEGLLLPCDETVESDLMQGSDFLKNI--KSSTKESLG-----DK- 338
Query: 257 VIVIGGG 263
V++IGGG
Sbjct: 339 VVIIGGG 345
>UNIPROTKB|Q12882 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9606 "Homo sapiens" [GO:0004158 "dihydroorotate oxidase
activity" evidence=IEA] [GO:0006222 "UMP biosynthetic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0019483 "beta-alanine biosynthetic process" evidence=IEA]
[GO:0017113 "dihydropyrimidine dehydrogenase (NADP+) activity"
evidence=ISS;IMP;IDA;TAS] [GO:0006212 "uracil catabolic process"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0042803 "protein homodimerization
activity" evidence=ISS;IDA] [GO:0006145 "purine nucleobase
catabolic process" evidence=IMP] [GO:0006208 "pyrimidine nucleobase
catabolic process" evidence=ISS;IMP] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] [GO:0050661 "NADP binding"
evidence=ISS] [GO:0006210 "thymine catabolic process" evidence=IDA]
[GO:0006214 "thymidine catabolic process" evidence=IDA] [GO:0006206
"pyrimidine nucleobase metabolic process" evidence=TAS] [GO:0044281
"small molecule metabolic process" evidence=TAS] [GO:0046135
"pyrimidine nucleoside catabolic process" evidence=TAS] [GO:0055086
"nucleobase-containing small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR005720
InterPro:IPR009051 InterPro:IPR012135 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR017896 Pfam:PF01180 PROSITE:PS51379
UniPathway:UPA00131 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005829 GO:GO:0042803 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0046872 GO:GO:0050661 GO:GO:0016491 GO:GO:0051539
EMBL:CH471097 GO:GO:0051536 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006145 DrugBank:DB01101 GO:GO:0006222 SUPFAM:SSF46548
CTD:1806 HOVERGEN:HBG004351 KO:K00207 OrthoDB:EOG44J2H8
GO:GO:0004158 GO:GO:0017113 GO:GO:0006214 GO:GO:0006212
TIGRFAMs:TIGR01037 eggNOG:COG0167 EMBL:U09178 EMBL:U20938
EMBL:AB003063 EMBL:BT006740 EMBL:AK291217 EMBL:AL356457
EMBL:AC091608 EMBL:AC093576 EMBL:AC099787 EMBL:AC114878
EMBL:AC138135 EMBL:BX908805 EMBL:BC008379 EMBL:BC064027
EMBL:BC108742 EMBL:BC131777 EMBL:BC131778 EMBL:X95670 EMBL:U57655
IPI:IPI00029772 IPI:IPI00095889 PIR:A54718 RefSeq:NP_000101.2
RefSeq:NP_001153773.1 UniGene:Hs.335034 ProteinModelPortal:Q12882
SMR:Q12882 IntAct:Q12882 STRING:Q12882 PhosphoSite:Q12882
DMDM:160332325 PaxDb:Q12882 PRIDE:Q12882 DNASU:1806
Ensembl:ENST00000306031 Ensembl:ENST00000370192 GeneID:1806
KEGG:hsa:1806 UCSC:uc001drv.3 GeneCards:GC01M097543
H-InvDB:HIX0000804 HGNC:HGNC:3012 HPA:CAB033241 MIM:274270
MIM:612779 neXtProt:NX_Q12882 Orphanet:240839 Orphanet:240855
Orphanet:1675 Orphanet:240955 Orphanet:240963 PharmGKB:PA145
InParanoid:Q12882 BindingDB:Q12882 ChEMBL:CHEMBL3172 ChiTaRS:DPYD
DrugBank:DB00109 GenomeRNAi:1806 NextBio:7361 ArrayExpress:Q12882
Bgee:Q12882 CleanEx:HS_DPYD Genevestigator:Q12882
GermOnline:ENSG00000188641 GO:GO:0006210 Uniprot:Q12882
Length = 1025
Score = 127 (49.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 43/153 (28%), Positives = 71/153 (46%)
Query: 130 CPPLIVNIVGHS-VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 188
C + + G+S +T+FE+ + VGGL IP +L +VV ++L+ G++ +
Sbjct: 202 CASFLARL-GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKS 260
Query: 189 VG-KDIAAKELYEE-FDALLLCTGATWP-RDLPIPG-RQLSGIYFAMSFLESWQKKQMGN 244
+ ++ L E+ + A + G P +D G Q G Y + FL K
Sbjct: 261 LSVNEMTLSTLKEKGYKAAFIGIGLPEPNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAG 320
Query: 245 ENV--SPISAKDKNVIVIGGGDTGCDCIATSLR 275
SP+ + VIV+G GDT DC ++LR
Sbjct: 321 MCACHSPLPSIRGVVIVLGAGDTAFDCATSALR 353
>UNIPROTKB|Q5R895 [details] [associations]
symbol:DPYD "Dihydropyrimidine dehydrogenase [NADP(+)]"
species:9601 "Pongo abelii" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006212 "uracil catabolic process" evidence=ISS] [GO:0006214
"thymidine catabolic process" evidence=ISS] [GO:0017113
"dihydropyrimidine dehydrogenase (NADP+) activity" evidence=ISS]
InterPro:IPR005720 InterPro:IPR009051 InterPro:IPR012135
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR017896
Pfam:PF01180 PROSITE:PS51379 UniPathway:UPA00131 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0000166
GO:GO:0046872 GO:GO:0051539 Gene3D:1.10.1060.10 GO:GO:0019483
GO:GO:0006222 SUPFAM:SSF46548 CTD:1806 HOGENOM:HOG000007797
HOVERGEN:HBG004351 KO:K00207 GO:GO:0004158 GO:GO:0017113
GO:GO:0006214 GO:GO:0006212 TIGRFAMs:TIGR01037 HSSP:Q28943
EMBL:CR859859 RefSeq:NP_001126169.1 UniGene:Pab.11422
ProteinModelPortal:Q5R895 SMR:Q5R895 PRIDE:Q5R895 GeneID:100173131
KEGG:pon:100173131 InParanoid:Q5R895 Uniprot:Q5R895
Length = 1025
Score = 127 (49.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 43/153 (28%), Positives = 71/153 (46%)
Query: 130 CPPLIVNIVGHS-VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNIN 188
C + + G+S +T+FE+ + VGGL IP +L +VV ++L+ G++ +
Sbjct: 202 CASFLARL-GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKS 260
Query: 189 VG-KDIAAKELYEE-FDALLLCTGATWP-RDLPIPG-RQLSGIYFAMSFLESWQKKQMGN 244
+ ++ L E+ + A + G P +D G Q G Y + FL K
Sbjct: 261 LSVNEMTLSTLKEKGYKAAFIGIGLPEPNKDAIFQGLTQDQGFYTSKDFLPLVAKGSKAG 320
Query: 245 ENV--SPISAKDKNVIVIGGGDTGCDCIATSLR 275
SP+ + VIV+G GDT DC ++LR
Sbjct: 321 MCACHSPLPSIRGVVIVLGAGDTAFDCATSALR 353
>UNIPROTKB|B4DX24 [details] [associations]
symbol:FDXR "NADPH:adrenodoxin oxidoreductase,
mitochondrial" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
InterPro:IPR021163 PIRSF:PIRSF000362 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005759 CTD:2232
HOVERGEN:HBG002132 KO:K00528 GO:GO:0004324 EMBL:AC068874
IPI:IPI00026958 RefSeq:NP_001244943.1 UniGene:Hs.69745 GeneID:2232
KEGG:hsa:2232 HGNC:HGNC:3642 EMBL:AK301779
ProteinModelPortal:B4DX24 STRING:B4DX24 PRIDE:B4DX24
Ensembl:ENST00000582944 UCSC:uc002jlz.3 ArrayExpress:B4DX24
Bgee:B4DX24 Uniprot:B4DX24
Length = 483
Score = 123 (48.4 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 142 VTVFERNDRVGGLLQYGIPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKELYEE 201
V ++E+ GL+++G+ VK + F N+ VG+D+ EL E
Sbjct: 65 VDIYEKQPVPFGLVRFGVAPD-------HPEVKTAHSGRCAFWGNVEVGRDVTVPELREA 117
Query: 202 FDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNVIVIG 261
+ A++L GA R L IPG +L G+ A +F+ W N+ + P + D +++G
Sbjct: 118 YHAVVLSYGAEDHRALEIPGEELPGVCSARAFV-GWYNGLPENQELEPDLSCD-TAVILG 175
Query: 262 GGDTGCD 268
G+ D
Sbjct: 176 QGNVALD 182
>UNIPROTKB|P65528 [details] [associations]
symbol:fprB "Probable ferredoxin/ferredoxin--NADP
reductase" species:1773 "Mycobacterium tuberculosis" [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR001450
InterPro:IPR017896 InterPro:IPR021163 Pfam:PF12838
PIRSF:PIRSF000362 PROSITE:PS51379 InterPro:IPR016040
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0009055 GO:GO:0046872 GO:GO:0051539
GO:GO:0022900 EMBL:BX842574 eggNOG:COG0493 HOGENOM:HOG000249250
KO:K00528 GO:GO:0004324 OMA:ARSDRCA PIR:C70781 RefSeq:NP_215401.1
RefSeq:NP_335337.1 RefSeq:YP_006514237.1 ProteinModelPortal:P65528
SMR:P65528 PRIDE:P65528 EnsemblBacteria:EBMYCT00000003208
EnsemblBacteria:EBMYCT00000070247 GeneID:13318788 GeneID:885195
GeneID:926219 KEGG:mtc:MT0909 KEGG:mtu:Rv0886 KEGG:mtv:RVBD_0886
PATRIC:18123748 TubercuList:Rv0886 ProtClustDB:CLSK790809
Uniprot:P65528
Length = 575
Score = 117 (46.2 bits), Expect = 0.00043, P = 0.00043
Identities = 37/131 (28%), Positives = 57/131 (43%)
Query: 139 GHSVTVFERNDRVGGLLQYGI-PTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAKE 197
G V VFE+ GL++ G+ P + +K V + ++ F N+ +GK + E
Sbjct: 136 GVQVNVFEKLPTPYGLVRSGVAPDHQNTKRVTRLFDRIAGHRRFRFYLNVEIGKHLGHAE 195
Query: 198 LYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISAKDKNV 257
L A+L GA R L I G L G A L +W + N P+ + V
Sbjct: 196 LLAHHHAVLYAVGAPDDRRLTIDGMGLPGTGTATE-LVAWLNGHP-DFNDLPVDLSHERV 253
Query: 258 IVIGGGDTGCD 268
++IG G+ D
Sbjct: 254 VIIGNGNVALD 264
>TIGR_CMR|SPO_3586 [details] [associations]
symbol:SPO_3586 "2,4-dienoyl-CoA reductase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0008670 "2,4-dienoyl-CoA reductase
(NADPH) activity" evidence=ISS] [GO:0009062 "fatty acid catabolic
process" evidence=ISS] InterPro:IPR001155 InterPro:IPR013027
InterPro:IPR013785 InterPro:IPR023753 Pfam:PF00724 Pfam:PF07992
PRINTS:PR00368 Gene3D:3.20.20.70 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0010181 GO:GO:0008670
HOGENOM:HOG000237760 KO:K00219 RefSeq:YP_168781.1
ProteinModelPortal:Q5LMH7 SMR:Q5LMH7 GeneID:3194304
KEGG:sil:SPO3586 PATRIC:23380649 OMA:HETELRY
ProtClustDB:CLSK2463892 Uniprot:Q5LMH7
Length = 675
Score = 117 (46.2 bits), Expect = 0.00053, P = 0.00053
Identities = 35/116 (30%), Positives = 63/116 (54%)
Query: 139 GHSVTVFERNDRVGGLLQYG--IPTMKLSKEVVQRRVKLLAAEGIEFKTNINVGKDIAAK 196
GH+VTVF+++D +GG L +P + +V +LA G+ K +GK + A
Sbjct: 397 GHAVTVFDKSDEIGGQLNMAKQVPGKEEFWGLVDWYRVMLADLGVTLK----LGKAVGAG 452
Query: 197 ELYEEFDALLLCTGATWPRDLPIPGRQLSGIYFAMSFLESWQKKQMGNENVSPISA 252
+L FD +++ TG + PRD IPG+ + + +S+++ + K+ + V+ I A
Sbjct: 453 DL-SGFDEVVIATGVS-PRDPAIPGQDRANV---LSYIDVLRHKKPVGKRVAVIGA 503
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 276 276 0.00079 115 3 11 22 0.36 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 78
No. of states in DFA: 617 (66 KB)
Total size of DFA: 200 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.21u 0.10s 21.31t Elapsed: 00:00:10
Total cpu time: 21.23u 0.10s 21.33t Elapsed: 00:00:10
Start: Thu Aug 15 11:36:05 2013 End: Thu Aug 15 11:36:15 2013