BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy12813
         (98 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q5R8S4|ERLEC_PONAB Endoplasmic reticulum lectin 1 OS=Pongo abelii GN=ERLEC1 PE=2 SV=1
          Length = 483

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 1/49 (2%)

Query: 43  VKLKCVNSGLGSFSVALYLLEPHTCRYILGVESSMICKLLPYADEYGLF 91
           VKLKC  S     +V +Y+LEPH+C+YILGVES +ICK+L  ADE GL 
Sbjct: 432 VKLKCKESD-SPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLL 479


>sp|Q96DZ1|ERLEC_HUMAN Endoplasmic reticulum lectin 1 OS=Homo sapiens GN=ERLEC1 PE=1 SV=1
          Length = 483

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 1/49 (2%)

Query: 43  VKLKCVNSGLGSFSVALYLLEPHTCRYILGVESSMICKLLPYADEYGLF 91
           VKLKC  S     +V +Y+LEPH+C+YILGVES +ICK+L  ADE GL 
Sbjct: 432 VKLKCKESD-SPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLL 479


>sp|Q8VEH8|ERLEC_MOUSE Endoplasmic reticulum lectin 1 OS=Mus musculus GN=Erlec1 PE=2 SV=1
          Length = 483

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 1/49 (2%)

Query: 43  VKLKCVNSGLGSFSVALYLLEPHTCRYILGVESSMICKLLPYADEYGLF 91
           VKLKC  S     +V +Y+LEPH+C+YILGVES +ICK+L  ADE GL 
Sbjct: 432 VKLKCKESD-SPHAVTVYMLEPHSCQYILGVESPVICKILDTADENGLL 479


>sp|Q08B78|ERLEC_XENLA Endoplasmic reticulum lectin 1 OS=Xenopus laevis GN=erlec1 PE=2
           SV=1
          Length = 480

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 1/49 (2%)

Query: 43  VKLKCVNSGLGSFSVALYLLEPHTCRYILGVESSMICKLLPYADEYGLF 91
           VKLKC  S     +V +Y+LEP TC+YILGVES +ICK+L  ADE GL 
Sbjct: 429 VKLKCKQSE-SPHAVTVYMLEPQTCQYILGVESPVICKILDTADENGLL 476


>sp|Q28IT1|ERLEC_XENTR Endoplasmic reticulum lectin 1 OS=Xenopus tropicalis GN=erlec1 PE=2
           SV=1
          Length = 481

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 1/49 (2%)

Query: 43  VKLKCVNSGLGSFSVALYLLEPHTCRYILGVESSMICKLLPYADEYGLF 91
           VKLKC  S     +V +Y+LEP TC+YILGVES +ICK+L  ADE GL 
Sbjct: 430 VKLKCKESE-SPHAVTVYMLEPQTCQYILGVESPVICKILDTADENGLL 477


>sp|Q9VCU9|DCR1_DROME Endoribonuclease Dcr-1 OS=Drosophila melanogaster GN=Dcr-1 PE=1 SV=1
          Length = 2249

 Score = 32.3 bits (72), Expect = 0.95,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 3    SKDVIKKETGKEAEVVLKDFKEDNQSWIGRAEQ 35
            ++DV+ K+ G   E++L D  E N  W+ R EQ
Sbjct: 1620 NEDVLAKKLGDRRELLLSDLVELNADWVARHEQ 1652


>sp|C0SPA7|YUKB_BACSU Ftsk domain-containing protein YukB OS=Bacillus subtilis (strain 168)
            GN=yukB PE=4 SV=1
          Length = 1495

 Score = 28.9 bits (63), Expect = 8.7,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 12   GKEAEVVLKDFKEDNQSWIGRAEQIAALRDKVKLKCVNSG 51
             KE++V   + KED + WI  AE I   R+ + ++ V  G
Sbjct: 1332 AKESDVSYLETKEDIEQWIETAEDIFKTREAMYVEAVRQG 1371


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.135    0.391 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,688,460
Number of Sequences: 539616
Number of extensions: 1228208
Number of successful extensions: 3230
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3222
Number of HSP's gapped (non-prelim): 9
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)