Query psy12817
Match_columns 1201
No_of_seqs 524 out of 3547
Neff 5.2
Searched_HMMs 46136
Date Fri Aug 16 20:34:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12817.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12817hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02819 lysine-ketoglutarate 100.0 3E-202 7E-207 1868.1 85.5 919 2-1162 5-1016(1042)
2 KOG0172|consensus 100.0 5.3E-87 1.2E-91 742.6 24.1 418 564-1162 1-419 (445)
3 TIGR00561 pntA NAD(P) transhyd 100.0 3.4E-62 7.4E-67 576.5 34.9 346 4-439 1-369 (511)
4 TIGR00518 alaDH alanine dehydr 100.0 1E-60 2.2E-65 550.6 34.7 344 3-439 1-353 (370)
5 COG0686 Ald Alanine dehydrogen 100.0 2.1E-61 4.6E-66 526.4 27.0 342 3-438 1-353 (371)
6 PRK09424 pntA NAD(P) transhydr 100.0 6.5E-56 1.4E-60 524.8 32.9 347 3-439 1-370 (509)
7 PF03435 Saccharop_dh: Sacchar 100.0 4.5E-50 9.8E-55 463.4 35.0 356 568-1163 1-362 (386)
8 COG1748 LYS9 Saccharopine dehy 100.0 5.7E-49 1.2E-53 450.5 33.2 278 565-858 1-280 (389)
9 COG3288 PntA NAD/NADP transhyd 100.0 1.4E-50 3E-55 441.1 17.2 344 4-434 1-356 (356)
10 PF05222 AlaDh_PNT_N: Alanine 100.0 3.5E-31 7.5E-36 266.5 8.4 126 6-136 1-136 (136)
11 PF01262 AlaDh_PNT_C: Alanine 100.0 4E-31 8.8E-36 274.0 0.9 164 179-379 4-168 (168)
12 PRK08306 dipicolinate synthase 99.8 2.1E-19 4.6E-24 202.6 25.4 249 24-408 16-291 (296)
13 PLN02819 lysine-ketoglutarate 99.7 2.8E-18 6.2E-23 217.4 4.0 111 917-1027 119-229 (1042)
14 COG3268 Uncharacterized conser 99.4 3E-12 6.4E-17 143.4 15.4 185 565-766 6-203 (382)
15 KOG2733|consensus 99.4 2.1E-12 4.5E-17 145.4 11.4 131 565-697 5-153 (423)
16 PRK13304 L-aspartate dehydroge 99.1 1.4E-09 3E-14 121.5 15.7 140 565-722 1-146 (265)
17 TIGR01921 DAP-DH diaminopimela 99.1 1.1E-09 2.4E-14 125.1 15.1 143 565-724 3-151 (324)
18 PRK13302 putative L-aspartate 99.1 1.3E-09 2.7E-14 122.3 15.2 142 564-722 5-149 (271)
19 COG0673 MviM Predicted dehydro 99.1 2.2E-09 4.8E-14 122.0 16.9 146 564-722 2-157 (342)
20 PF01408 GFO_IDH_MocA: Oxidore 99.0 3.8E-09 8.1E-14 102.7 13.0 111 566-686 1-118 (120)
21 KOG0172|consensus 99.0 3E-11 6.4E-16 137.6 -3.9 324 7-409 62-405 (445)
22 cd01065 NAD_bind_Shikimate_DH 98.9 3.8E-09 8.2E-14 107.2 10.9 130 563-706 17-150 (155)
23 PRK11579 putative oxidoreducta 98.9 1.4E-08 2.9E-13 117.2 16.4 142 565-722 4-154 (346)
24 TIGR02853 spore_dpaA dipicolin 98.9 7.4E-08 1.6E-12 109.1 19.9 137 192-404 148-286 (287)
25 PRK00258 aroE shikimate 5-dehy 98.9 7.5E-09 1.6E-13 116.3 10.6 136 563-722 121-261 (278)
26 PRK00048 dihydrodipicolinate r 98.8 1.4E-08 3E-13 113.1 10.5 131 565-706 1-135 (257)
27 PRK10206 putative oxidoreducta 98.8 4.2E-08 9.2E-13 113.4 14.3 144 565-722 1-154 (344)
28 PRK12549 shikimate 5-dehydroge 98.8 1.9E-08 4.1E-13 113.7 9.5 137 564-722 126-267 (284)
29 PRK12548 shikimate 5-dehydroge 98.7 6.1E-08 1.3E-12 109.7 12.4 139 564-722 125-276 (289)
30 PRK13303 L-aspartate dehydroge 98.7 6.7E-08 1.4E-12 108.2 12.4 126 565-700 1-132 (265)
31 PRK14027 quinate/shikimate deh 98.7 4.8E-08 1E-12 110.4 10.8 140 564-723 126-270 (283)
32 TIGR01761 thiaz-red thiazoliny 98.7 1.8E-07 4E-12 108.3 15.8 121 564-696 2-129 (343)
33 TIGR00036 dapB dihydrodipicoli 98.7 7.7E-08 1.7E-12 107.8 11.0 130 565-699 1-136 (266)
34 TIGR01809 Shik-DH-AROM shikima 98.7 1E-07 2.2E-12 107.6 12.0 138 564-722 124-271 (282)
35 KOG2741|consensus 98.6 5.3E-07 1.2E-11 102.8 16.4 151 563-726 4-165 (351)
36 COG0169 AroE Shikimate 5-dehyd 98.6 7.6E-08 1.6E-12 108.6 9.1 139 564-724 125-268 (283)
37 PF01488 Shikimate_DH: Shikima 98.6 1.3E-07 2.8E-12 95.5 9.8 98 562-665 9-110 (135)
38 PRK12749 quinate/shikimate deh 98.6 2.5E-07 5.4E-12 104.9 12.9 139 564-722 123-273 (288)
39 TIGR00507 aroE shikimate 5-deh 98.6 1.7E-07 3.6E-12 105.0 11.2 133 564-722 116-254 (270)
40 PF03446 NAD_binding_2: NAD bi 98.5 8.3E-07 1.8E-11 92.2 12.9 110 565-686 1-117 (163)
41 PRK12550 shikimate 5-dehydroge 98.5 4.1E-07 9E-12 102.4 10.6 127 566-722 123-256 (272)
42 PRK06270 homoserine dehydrogen 98.4 1.6E-06 3.4E-11 100.6 13.0 144 565-718 2-177 (341)
43 PRK00436 argC N-acetyl-gamma-g 98.3 1.3E-06 2.9E-11 101.2 8.3 97 564-664 1-99 (343)
44 COG1712 Predicted dinucleotide 98.3 8.8E-06 1.9E-10 88.3 12.8 136 566-719 1-142 (255)
45 COG2084 MmsB 3-hydroxyisobutyr 98.3 6E-06 1.3E-10 93.4 12.2 110 566-686 1-118 (286)
46 PF03807 F420_oxidored: NADP o 98.3 5.9E-06 1.3E-10 77.7 10.2 88 567-663 1-93 (96)
47 COG0373 HemA Glutamyl-tRNA red 98.2 4.8E-06 1E-10 98.2 10.6 95 562-664 175-274 (414)
48 PRK08618 ornithine cyclodeamin 98.2 3.2E-06 7E-11 97.3 8.7 104 565-677 127-234 (325)
49 cd01078 NAD_bind_H4MPT_DH NADP 98.2 8.1E-06 1.8E-10 86.8 11.0 103 563-668 26-133 (194)
50 TIGR02853 spore_dpaA dipicolin 98.2 9.4E-06 2E-10 92.2 11.9 115 563-690 149-264 (287)
51 PRK11559 garR tartronate semia 98.2 1.2E-05 2.5E-10 90.9 12.3 110 565-686 2-119 (296)
52 TIGR03855 NAD_NadX aspartate d 98.2 1.3E-05 2.7E-10 88.4 11.8 111 592-720 5-120 (229)
53 PRK06349 homoserine dehydrogen 98.1 1.2E-05 2.6E-10 95.9 12.1 121 565-696 3-141 (426)
54 PRK13301 putative L-aspartate 98.1 2.2E-05 4.7E-10 87.9 13.0 125 565-701 2-134 (267)
55 PF13460 NAD_binding_10: NADH( 98.1 1E-05 2.2E-10 83.9 9.9 89 568-682 1-90 (183)
56 TIGR03215 ac_ald_DH_ac acetald 98.1 1.2E-05 2.6E-10 91.2 10.4 91 566-665 2-96 (285)
57 PLN02520 bifunctional 3-dehydr 98.1 1.2E-05 2.6E-10 98.4 11.0 134 563-723 377-516 (529)
58 PRK13940 glutamyl-tRNA reducta 98.1 7.4E-06 1.6E-10 97.4 8.8 109 562-686 178-292 (414)
59 PLN02712 arogenate dehydrogena 98.1 0.00046 1E-08 86.8 24.0 92 563-667 367-463 (667)
60 CHL00194 ycf39 Ycf39; Provisio 98.0 3.2E-05 7E-10 88.0 12.3 72 566-642 1-73 (317)
61 cd05213 NAD_bind_Glutamyl_tRNA 98.0 3.7E-05 8E-10 88.2 12.5 110 563-686 176-292 (311)
62 TIGR01850 argC N-acetyl-gamma- 98.0 9.9E-06 2.1E-10 94.2 7.8 96 566-664 1-99 (346)
63 PRK09310 aroDE bifunctional 3- 98.0 3.4E-05 7.4E-10 93.4 12.5 126 564-722 331-456 (477)
64 PF01113 DapB_N: Dihydrodipico 98.0 3.8E-06 8.2E-11 83.9 3.7 111 566-681 1-117 (124)
65 PRK08300 acetaldehyde dehydrog 98.0 2.5E-05 5.5E-10 89.1 10.3 93 564-665 3-102 (302)
66 PF01118 Semialdhyde_dh: Semia 98.0 1.6E-05 3.4E-10 78.8 7.4 93 567-665 1-98 (121)
67 KOG0409|consensus 98.0 4.1E-05 8.8E-10 86.3 11.2 113 562-686 32-153 (327)
68 PRK06141 ornithine cyclodeamin 98.0 1.7E-05 3.7E-10 91.0 8.5 115 564-686 124-241 (314)
69 PRK08306 dipicolinate synthase 98.0 4.3E-05 9.4E-10 87.2 11.7 115 564-690 151-265 (296)
70 PF05368 NmrA: NmrA-like famil 98.0 3.2E-05 7E-10 83.8 9.9 91 568-663 1-100 (233)
71 PRK15461 NADH-dependent gamma- 97.9 4.9E-05 1.1E-09 86.4 11.6 110 565-686 1-118 (296)
72 PLN00203 glutamyl-tRNA reducta 97.9 5.3E-05 1.2E-09 92.4 11.5 113 563-686 264-388 (519)
73 PRK04207 glyceraldehyde-3-phos 97.9 5E-05 1.1E-09 88.3 10.8 96 565-665 1-110 (341)
74 TIGR01505 tartro_sem_red 2-hyd 97.9 5.6E-05 1.2E-09 85.4 11.0 108 567-686 1-116 (291)
75 PRK09599 6-phosphogluconate de 97.9 0.00014 3.1E-09 82.8 14.2 118 566-693 1-123 (301)
76 PRK12490 6-phosphogluconate de 97.9 9.8E-05 2.1E-09 84.1 12.2 109 566-686 1-117 (299)
77 TIGR00872 gnd_rel 6-phosphoglu 97.9 0.00011 2.3E-09 83.7 12.6 118 566-693 1-122 (298)
78 PLN02350 phosphogluconate dehy 97.9 9.6E-05 2.1E-09 89.7 12.7 126 563-693 4-136 (493)
79 PRK11908 NAD-dependent epimera 97.9 8.4E-05 1.8E-09 85.4 11.5 76 565-642 1-77 (347)
80 COG0569 TrkA K+ transport syst 97.8 0.00043 9.3E-09 76.1 16.4 111 566-683 1-115 (225)
81 COG4091 Predicted homoserine d 97.8 0.00031 6.8E-09 80.4 15.4 156 562-735 14-193 (438)
82 TIGR02992 ectoine_eutC ectoine 97.8 3.5E-05 7.5E-10 89.0 7.8 106 565-678 129-238 (326)
83 PRK07340 ornithine cyclodeamin 97.8 3.4E-05 7.3E-10 88.3 7.6 108 565-680 125-233 (304)
84 PF03447 NAD_binding_3: Homose 97.8 2.6E-05 5.7E-10 76.5 5.6 104 572-686 1-116 (117)
85 PRK05447 1-deoxy-D-xylulose 5- 97.8 0.00028 6E-09 83.0 14.4 126 565-695 1-152 (385)
86 PLN02427 UDP-apiose/xylose syn 97.8 0.00011 2.3E-09 86.0 11.0 78 563-642 12-95 (386)
87 COG2910 Putative NADH-flavin r 97.7 0.00011 2.5E-09 77.9 9.2 105 566-693 1-114 (211)
88 TIGR02356 adenyl_thiF thiazole 97.7 0.00019 4.1E-09 77.6 11.0 100 562-664 18-143 (202)
89 PRK08291 ectoine utilization p 97.7 7.7E-05 1.7E-09 86.3 8.5 105 565-677 132-240 (330)
90 PRK06046 alanine dehydrogenase 97.7 6.2E-05 1.3E-09 86.9 7.7 115 565-685 129-244 (326)
91 TIGR01692 HIBADH 3-hydroxyisob 97.7 0.00014 3E-09 82.3 10.3 105 570-686 1-113 (288)
92 cd05311 NAD_bind_2_malic_enz N 97.7 0.00013 2.9E-09 80.2 9.7 116 563-690 23-153 (226)
93 PLN00141 Tic62-NAD(P)-related 97.7 0.00032 6.9E-09 77.1 12.7 83 559-643 11-95 (251)
94 PRK08374 homoserine dehydrogen 97.7 0.00044 9.5E-09 80.4 13.3 150 565-719 2-175 (336)
95 PRK06392 homoserine dehydrogen 97.7 0.00036 7.9E-09 80.8 12.6 117 566-686 1-140 (326)
96 TIGR02371 ala_DH_arch alanine 97.6 0.0001 2.2E-09 85.2 7.7 111 565-681 128-239 (325)
97 PRK07634 pyrroline-5-carboxyla 97.6 0.00025 5.5E-09 77.7 10.2 89 565-663 4-98 (245)
98 PLN03209 translocon at the inn 97.6 0.00042 9E-09 85.2 12.9 78 563-643 78-169 (576)
99 PRK12475 thiamine/molybdopteri 97.6 0.00017 3.7E-09 83.8 9.2 104 559-665 18-149 (338)
100 PRK15059 tartronate semialdehy 97.6 0.00052 1.1E-08 78.2 12.8 108 566-686 1-116 (292)
101 TIGR03589 PseB UDP-N-acetylglu 97.6 0.00046 1E-08 79.1 12.5 77 564-642 3-83 (324)
102 PRK07680 late competence prote 97.6 0.00022 4.9E-09 80.0 9.6 90 566-664 1-96 (273)
103 smart00859 Semialdhyde_dh Semi 97.6 0.00017 3.7E-09 71.2 7.5 94 567-665 1-100 (122)
104 PRK08762 molybdopterin biosynt 97.6 0.00037 8.1E-09 82.0 11.5 102 562-664 132-257 (376)
105 PRK07688 thiamine/molybdopteri 97.6 0.00022 4.8E-09 82.9 9.3 102 561-665 20-149 (339)
106 PRK00045 hemA glutamyl-tRNA re 97.6 0.00043 9.3E-09 82.8 11.9 94 563-664 180-280 (423)
107 PLN02657 3,8-divinyl protochlo 97.6 0.00062 1.3E-08 80.4 13.1 78 562-642 57-145 (390)
108 PRK11880 pyrroline-5-carboxyla 97.5 0.00035 7.5E-09 77.8 10.0 89 565-663 2-93 (267)
109 PRK08219 short chain dehydroge 97.5 0.00075 1.6E-08 71.8 11.8 75 565-643 3-81 (227)
110 PF01210 NAD_Gly3P_dh_N: NAD-d 97.5 0.00023 5E-09 73.7 7.7 92 567-663 1-102 (157)
111 COG0002 ArgC Acetylglutamate s 97.5 0.00024 5.2E-09 81.9 8.5 97 564-664 1-101 (349)
112 PRK06476 pyrroline-5-carboxyla 97.5 0.00032 7E-09 78.0 9.2 90 566-664 1-93 (258)
113 TIGR01035 hemA glutamyl-tRNA r 97.5 0.00087 1.9E-08 80.1 13.4 110 563-686 178-296 (417)
114 PTZ00142 6-phosphogluconate de 97.5 0.00083 1.8E-08 81.4 13.3 122 565-695 1-132 (470)
115 cd01075 NAD_bind_Leu_Phe_Val_D 97.5 0.001 2.3E-08 71.9 12.8 114 563-690 26-141 (200)
116 PF03721 UDPG_MGDP_dh_N: UDP-g 97.5 0.00034 7.4E-09 74.8 8.9 125 566-706 1-138 (185)
117 PRK07502 cyclohexadienyl dehyd 97.5 0.00084 1.8E-08 76.7 12.5 94 565-667 6-103 (307)
118 cd01483 E1_enzyme_family Super 97.5 0.00097 2.1E-08 67.6 11.6 96 567-665 1-122 (143)
119 COG2085 Predicted dinucleotide 97.5 0.00039 8.4E-09 75.5 9.1 91 565-664 1-93 (211)
120 PF00899 ThiF: ThiF family; I 97.5 0.00055 1.2E-08 68.9 9.5 97 565-664 2-124 (135)
121 PRK08223 hypothetical protein; 97.4 0.00059 1.3E-08 77.6 10.4 104 558-664 20-151 (287)
122 PRK14618 NAD(P)H-dependent gly 97.4 0.00075 1.6E-08 77.7 11.5 94 565-664 4-104 (328)
123 PF02254 TrkA_N: TrkA-N domain 97.4 0.0023 5.1E-08 62.0 13.1 107 568-683 1-111 (116)
124 COG0460 ThrA Homoserine dehydr 97.4 0.0012 2.6E-08 76.3 12.8 152 564-722 2-169 (333)
125 PLN02968 Probable N-acetyl-gam 97.4 0.00026 5.6E-09 83.6 7.4 97 563-664 36-134 (381)
126 TIGR00518 alaDH alanine dehydr 97.4 0.00084 1.8E-08 79.0 11.6 74 564-642 166-239 (370)
127 TIGR02355 moeB molybdopterin s 97.4 0.0007 1.5E-08 75.2 10.2 102 562-664 21-146 (240)
128 cd01487 E1_ThiF_like E1_ThiF_l 97.4 0.00095 2.1E-08 70.7 10.7 94 567-663 1-120 (174)
129 cd00757 ThiF_MoeB_HesA_family 97.4 0.00072 1.6E-08 74.3 9.6 101 562-665 18-144 (228)
130 PRK15181 Vi polysaccharide bio 97.4 0.00099 2.1E-08 77.0 11.2 77 563-642 13-99 (348)
131 PRK00094 gpsA NAD(P)H-dependen 97.3 0.00083 1.8E-08 76.5 10.3 75 565-644 1-82 (325)
132 TIGR03026 NDP-sugDHase nucleot 97.3 0.00099 2.1E-08 79.2 11.2 122 566-703 1-135 (411)
133 PLN02214 cinnamoyl-CoA reducta 97.3 0.0013 2.8E-08 76.0 11.9 78 563-643 8-91 (342)
134 PLN02858 fructose-bisphosphate 97.3 0.00089 1.9E-08 90.2 12.0 111 564-686 3-123 (1378)
135 TIGR00873 gnd 6-phosphoglucona 97.3 0.0017 3.7E-08 78.7 13.1 123 567-694 1-128 (467)
136 PRK05597 molybdopterin biosynt 97.3 0.0011 2.4E-08 77.6 11.2 100 562-664 25-150 (355)
137 PRK08644 thiamine biosynthesis 97.3 0.0014 3E-08 71.6 11.2 98 563-663 26-149 (212)
138 PRK06928 pyrroline-5-carboxyla 97.3 0.00085 1.8E-08 75.8 9.8 91 565-664 1-98 (277)
139 PRK06407 ornithine cyclodeamin 97.3 0.0004 8.8E-09 79.5 7.2 107 565-679 117-227 (301)
140 PRK12491 pyrroline-5-carboxyla 97.3 0.00086 1.9E-08 75.8 9.8 89 565-663 2-96 (272)
141 PRK05690 molybdopterin biosynt 97.3 0.00095 2.1E-08 74.4 9.9 102 560-664 27-154 (245)
142 PRK08125 bifunctional UDP-gluc 97.3 0.001 2.2E-08 83.7 11.3 77 563-642 313-391 (660)
143 PRK08267 short chain dehydroge 97.3 0.0008 1.7E-08 73.7 9.2 76 565-643 1-87 (260)
144 PRK05600 thiamine biosynthesis 97.3 0.00091 2E-08 78.8 10.1 103 559-664 35-163 (370)
145 cd05211 NAD_bind_Glu_Leu_Phe_V 97.3 0.0027 6E-08 69.6 12.8 147 562-747 20-181 (217)
146 PF02826 2-Hacid_dh_C: D-isome 97.3 0.0019 4.1E-08 68.4 11.1 96 191-336 32-127 (178)
147 PLN02858 fructose-bisphosphate 97.3 0.0014 3E-08 88.3 12.5 111 564-686 323-443 (1378)
148 PRK09496 trkA potassium transp 97.3 0.0016 3.6E-08 77.6 11.9 90 566-659 1-93 (453)
149 PRK07589 ornithine cyclodeamin 97.3 0.00045 9.7E-09 80.7 6.9 108 565-679 129-240 (346)
150 COG3804 Uncharacterized conser 97.3 0.002 4.2E-08 72.3 11.4 132 565-701 2-143 (350)
151 PRK08328 hypothetical protein; 97.2 0.0021 4.6E-08 71.0 11.4 100 562-664 24-150 (231)
152 PRK06823 ornithine cyclodeamin 97.2 0.00076 1.6E-08 77.8 8.0 114 564-685 127-244 (315)
153 PRK15057 UDP-glucose 6-dehydro 97.2 0.0015 3.2E-08 77.5 10.5 117 566-699 1-128 (388)
154 PRK08655 prephenate dehydrogen 97.2 0.0028 6.1E-08 76.3 12.9 90 566-666 1-94 (437)
155 PRK07679 pyrroline-5-carboxyla 97.2 0.0021 4.6E-08 72.5 11.1 93 566-668 4-104 (279)
156 TIGR03466 HpnA hopanoid-associ 97.2 0.0013 2.7E-08 74.1 9.3 72 566-642 1-73 (328)
157 TIGR03649 ergot_EASG ergot alk 97.2 0.00074 1.6E-08 75.4 7.3 69 567-643 1-77 (285)
158 PF10727 Rossmann-like: Rossma 97.2 0.00055 1.2E-08 69.3 5.6 90 564-664 9-104 (127)
159 PRK15116 sulfur acceptor prote 97.2 0.0059 1.3E-07 69.1 14.1 100 562-663 27-152 (268)
160 PLN02896 cinnamyl-alcohol dehy 97.1 0.0017 3.7E-08 75.0 10.1 77 564-643 9-89 (353)
161 COG0289 DapB Dihydrodipicolina 97.1 0.0031 6.7E-08 70.6 11.5 121 564-694 1-130 (266)
162 PF02423 OCD_Mu_crystall: Orni 97.1 0.00014 3E-09 83.7 1.0 113 565-684 128-244 (313)
163 PRK09496 trkA potassium transp 97.1 0.0039 8.4E-08 74.4 13.2 116 563-685 229-347 (453)
164 PRK11064 wecC UDP-N-acetyl-D-m 97.1 0.0025 5.4E-08 76.2 11.5 114 565-700 3-131 (415)
165 KOG1502|consensus 97.1 0.0017 3.6E-08 75.0 9.4 97 564-663 5-127 (327)
166 cd00755 YgdL_like Family of ac 97.1 0.0048 1E-07 68.4 12.7 98 563-663 9-133 (231)
167 PRK14874 aspartate-semialdehyd 97.1 0.0011 2.3E-08 77.1 8.0 91 565-664 1-94 (334)
168 PRK09260 3-hydroxybutyryl-CoA 97.1 0.0028 6.1E-08 71.8 10.8 77 565-646 1-94 (288)
169 PF00670 AdoHcyase_NAD: S-aden 97.1 0.003 6.5E-08 66.4 10.0 80 196-311 24-103 (162)
170 PRK07326 short chain dehydroge 97.0 0.0027 5.9E-08 68.3 9.8 75 565-642 6-91 (237)
171 PRK06182 short chain dehydroge 97.0 0.0027 5.8E-08 70.4 9.9 74 565-643 3-84 (273)
172 PLN02662 cinnamyl-alcohol dehy 97.0 0.0018 3.8E-08 73.2 8.5 77 564-643 3-86 (322)
173 PRK06101 short chain dehydroge 97.0 0.0028 6E-08 69.0 9.8 75 565-642 1-80 (240)
174 COG0702 Predicted nucleoside-d 97.0 0.0059 1.3E-07 66.9 12.3 71 566-642 1-72 (275)
175 PRK07454 short chain dehydroge 97.0 0.0026 5.7E-08 68.8 9.4 78 563-643 4-93 (241)
176 COG5310 Homospermidine synthas 97.0 0.0015 3.3E-08 74.1 7.6 196 566-766 14-260 (481)
177 PRK07531 bifunctional 3-hydrox 97.0 0.0026 5.7E-08 77.6 10.3 113 565-683 4-134 (495)
178 PLN02650 dihydroflavonol-4-red 97.0 0.0021 4.6E-08 74.1 9.1 77 563-642 3-86 (351)
179 PLN02256 arogenate dehydrogena 97.0 0.0059 1.3E-07 70.3 12.5 92 562-666 33-129 (304)
180 PLN02353 probable UDP-glucose 97.0 0.0028 6.1E-08 77.0 10.3 125 565-699 1-138 (473)
181 PRK07102 short chain dehydroge 97.0 0.0028 6E-08 68.8 9.2 76 565-643 1-86 (243)
182 PRK06196 oxidoreductase; Provi 97.0 0.003 6.5E-08 71.9 9.9 77 564-643 25-109 (315)
183 TIGR01915 npdG NADPH-dependent 97.0 0.0033 7.1E-08 68.6 9.7 79 566-651 1-86 (219)
184 PLN02688 pyrroline-5-carboxyla 97.0 0.0028 6.1E-08 70.6 9.3 87 566-663 1-94 (266)
185 COG2423 Predicted ornithine cy 97.0 0.0016 3.4E-08 75.7 7.5 117 565-686 130-248 (330)
186 PRK05884 short chain dehydroge 97.0 0.003 6.5E-08 68.5 9.3 73 566-642 1-78 (223)
187 TIGR00978 asd_EA aspartate-sem 97.0 0.0023 4.9E-08 74.6 8.9 93 566-664 1-104 (341)
188 PF01073 3Beta_HSD: 3-beta hyd 97.0 0.0022 4.8E-08 72.6 8.5 71 569-641 1-74 (280)
189 PRK07411 hypothetical protein; 97.0 0.0036 7.8E-08 74.3 10.6 100 562-664 35-160 (390)
190 cd01485 E1-1_like Ubiquitin ac 97.0 0.0038 8.3E-08 67.4 9.9 101 563-664 17-145 (198)
191 PRK12829 short chain dehydroge 97.0 0.0034 7.5E-08 68.5 9.7 78 563-643 9-96 (264)
192 TIGR01181 dTDP_gluc_dehyt dTDP 97.0 0.0034 7.5E-08 70.0 9.9 75 567-643 1-83 (317)
193 PRK06153 hypothetical protein; 96.9 0.0039 8.4E-08 73.5 10.5 98 563-664 174-298 (393)
194 PRK10538 malonic semialdehyde 96.9 0.0038 8.1E-08 68.2 9.9 75 566-643 1-84 (248)
195 PRK04148 hypothetical protein; 96.9 0.005 1.1E-07 63.0 9.9 91 564-662 16-107 (134)
196 PLN02695 GDP-D-mannose-3',5'-e 96.9 0.0033 7.1E-08 73.7 9.8 74 564-642 20-94 (370)
197 cd01492 Aos1_SUMO Ubiquitin ac 96.9 0.0065 1.4E-07 65.7 11.2 99 562-664 18-142 (197)
198 COG0300 DltE Short-chain dehyd 96.9 0.003 6.4E-08 71.3 8.9 80 563-645 4-96 (265)
199 PRK07024 short chain dehydroge 96.9 0.0035 7.6E-08 68.8 9.4 75 565-642 2-87 (257)
200 PRK07231 fabG 3-ketoacyl-(acyl 96.9 0.0031 6.8E-08 68.2 8.8 77 564-643 4-91 (251)
201 PRK06194 hypothetical protein; 96.9 0.0035 7.6E-08 69.7 9.4 77 564-643 5-93 (287)
202 PRK07417 arogenate dehydrogena 96.9 0.0068 1.5E-07 68.5 11.6 93 566-669 1-96 (279)
203 PRK11863 N-acetyl-gamma-glutam 96.9 0.0025 5.4E-08 73.6 8.2 80 564-664 1-81 (313)
204 PRK07825 short chain dehydroge 96.9 0.0032 7E-08 69.6 8.9 77 564-643 4-88 (273)
205 COG0345 ProC Pyrroline-5-carbo 96.9 0.0039 8.4E-08 70.4 9.5 90 565-664 1-95 (266)
206 PRK06813 homoserine dehydrogen 96.9 0.0062 1.4E-07 71.3 11.5 143 565-719 2-175 (346)
207 PLN02986 cinnamyl-alcohol dehy 96.9 0.0033 7.1E-08 71.4 9.1 76 564-642 4-86 (322)
208 PRK07878 molybdopterin biosynt 96.9 0.0048 1E-07 73.3 10.6 99 563-664 40-164 (392)
209 PRK07523 gluconate 5-dehydroge 96.9 0.0039 8.4E-08 68.2 9.2 78 563-643 8-97 (255)
210 PRK06482 short chain dehydroge 96.9 0.0045 9.7E-08 68.6 9.7 76 565-643 2-86 (276)
211 TIGR01546 GAPDH-II_archae glyc 96.9 0.0052 1.1E-07 71.5 10.6 92 568-664 1-106 (333)
212 PLN02989 cinnamyl-alcohol dehy 96.9 0.0031 6.8E-08 71.6 8.7 75 565-642 5-86 (325)
213 PLN02253 xanthoxin dehydrogena 96.8 0.0055 1.2E-07 68.1 10.4 76 564-642 17-103 (280)
214 PRK05472 redox-sensing transcr 96.8 0.0022 4.8E-08 69.8 7.0 92 564-665 83-179 (213)
215 PRK06180 short chain dehydroge 96.8 0.005 1.1E-07 68.6 10.0 76 565-643 4-88 (277)
216 PRK07453 protochlorophyllide o 96.8 0.0044 9.6E-08 70.7 9.8 77 563-642 4-92 (322)
217 PRK05866 short chain dehydroge 96.8 0.005 1.1E-07 69.7 10.1 77 564-643 39-127 (293)
218 PRK08265 short chain dehydroge 96.8 0.0043 9.2E-08 68.5 9.3 78 563-643 4-90 (261)
219 PLN00198 anthocyanidin reducta 96.8 0.0035 7.6E-08 71.8 9.0 77 563-642 7-89 (338)
220 PLN00016 RNA-binding protein; 96.8 0.0028 6E-08 74.3 8.0 93 560-658 47-157 (378)
221 PRK09186 flagellin modificatio 96.8 0.0047 1E-07 67.2 9.3 75 564-641 3-91 (256)
222 PF07991 IlvN: Acetohydroxy ac 96.8 0.0038 8.1E-08 65.6 7.9 77 564-652 3-79 (165)
223 PRK06129 3-hydroxyacyl-CoA deh 96.8 0.0071 1.5E-07 69.3 11.0 76 565-645 2-94 (308)
224 PRK06130 3-hydroxybutyryl-CoA 96.8 0.0088 1.9E-07 68.3 11.6 77 564-645 3-91 (311)
225 cd01486 Apg7 Apg7 is an E1-lik 96.8 0.0063 1.4E-07 69.8 10.1 96 567-663 1-139 (307)
226 PLN02240 UDP-glucose 4-epimera 96.8 0.011 2.5E-07 67.6 12.4 77 564-643 4-91 (352)
227 PRK08507 prephenate dehydrogen 96.8 0.0083 1.8E-07 67.5 11.0 94 566-670 1-97 (275)
228 PRK07904 short chain dehydroge 96.8 0.0057 1.2E-07 67.6 9.5 78 564-643 7-97 (253)
229 PF01488 Shikimate_DH: Shikima 96.8 0.0038 8.2E-08 63.3 7.5 88 192-306 9-97 (135)
230 PLN02583 cinnamoyl-CoA reducta 96.8 0.013 2.9E-07 66.3 12.7 75 564-641 5-86 (297)
231 PRK05717 oxidoreductase; Valid 96.8 0.0052 1.1E-07 67.3 9.2 78 563-643 8-94 (255)
232 PRK12320 hypothetical protein; 96.7 0.0064 1.4E-07 76.9 11.0 90 566-664 1-101 (699)
233 PRK06138 short chain dehydroge 96.7 0.0069 1.5E-07 65.7 9.9 77 564-643 4-91 (252)
234 PRK12429 3-hydroxybutyrate deh 96.7 0.0071 1.5E-07 65.7 10.0 76 565-643 4-91 (258)
235 PRK09291 short chain dehydroge 96.7 0.0083 1.8E-07 65.4 10.6 76 565-643 2-83 (257)
236 PRK07060 short chain dehydroge 96.7 0.007 1.5E-07 65.3 9.9 76 564-643 8-87 (245)
237 PRK05693 short chain dehydroge 96.7 0.005 1.1E-07 68.3 8.9 74 565-643 1-82 (274)
238 PRK05993 short chain dehydroge 96.7 0.0046 9.9E-08 69.0 8.6 74 565-643 4-86 (277)
239 PRK05867 short chain dehydroge 96.7 0.0068 1.5E-07 66.3 9.8 77 564-643 8-96 (253)
240 PRK05479 ketol-acid reductoiso 96.7 0.0042 9.1E-08 72.2 8.4 77 562-650 14-90 (330)
241 TIGR03325 BphB_TodD cis-2,3-di 96.7 0.0053 1.2E-07 67.6 9.0 76 564-642 4-88 (262)
242 PLN02686 cinnamoyl-CoA reducta 96.7 0.0057 1.2E-07 71.7 9.6 78 562-642 50-137 (367)
243 PRK06057 short chain dehydroge 96.7 0.0075 1.6E-07 66.1 10.0 76 564-643 6-89 (255)
244 PRK07890 short chain dehydroge 96.7 0.0044 9.6E-08 67.5 8.2 76 564-642 4-91 (258)
245 PRK12826 3-ketoacyl-(acyl-carr 96.7 0.007 1.5E-07 65.3 9.6 77 564-643 5-93 (251)
246 TIGR02354 thiF_fam2 thiamine b 96.7 0.0083 1.8E-07 65.1 10.1 76 563-641 19-118 (200)
247 PRK10669 putative cation:proto 96.7 0.013 2.9E-07 72.5 13.2 128 565-707 417-548 (558)
248 PF01370 Epimerase: NAD depend 96.7 0.0076 1.6E-07 64.4 9.8 72 568-643 1-75 (236)
249 PRK05671 aspartate-semialdehyd 96.7 0.0033 7.1E-08 73.3 7.4 92 564-664 3-97 (336)
250 PRK14982 acyl-ACP reductase; P 96.7 0.0051 1.1E-07 71.8 9.0 93 563-665 153-247 (340)
251 PRK14852 hypothetical protein; 96.7 0.0065 1.4E-07 78.5 10.6 101 560-663 327-455 (989)
252 COG0240 GpsA Glycerol-3-phosph 96.7 0.006 1.3E-07 70.5 9.4 86 565-652 1-90 (329)
253 PRK06949 short chain dehydroge 96.7 0.0091 2E-07 65.1 10.5 78 563-643 7-96 (258)
254 PRK08309 short chain dehydroge 96.7 0.015 3.2E-07 62.0 11.6 90 566-659 1-101 (177)
255 PRK06200 2,3-dihydroxy-2,3-dih 96.7 0.0082 1.8E-07 66.1 10.1 77 564-643 5-90 (263)
256 PRK07066 3-hydroxybutyryl-CoA 96.7 0.0064 1.4E-07 70.5 9.5 77 565-646 7-96 (321)
257 PRK09987 dTDP-4-dehydrorhamnos 96.7 0.0047 1E-07 70.1 8.4 60 566-642 1-63 (299)
258 PRK05653 fabG 3-ketoacyl-(acyl 96.7 0.0055 1.2E-07 65.7 8.5 76 565-643 5-92 (246)
259 PRK05565 fabG 3-ketoacyl-(acyl 96.7 0.0072 1.6E-07 65.1 9.4 78 563-643 3-93 (247)
260 TIGR00715 precor6x_red precorr 96.7 0.0045 9.8E-08 69.6 8.0 92 566-663 1-98 (256)
261 PRK08340 glucose-1-dehydrogena 96.7 0.0075 1.6E-07 66.3 9.7 75 566-643 1-86 (259)
262 PRK07814 short chain dehydroge 96.7 0.0088 1.9E-07 66.0 10.1 78 563-643 8-97 (263)
263 PRK08177 short chain dehydroge 96.6 0.0055 1.2E-07 65.9 8.2 75 565-643 1-81 (225)
264 PRK07774 short chain dehydroge 96.6 0.0098 2.1E-07 64.5 10.2 77 564-643 5-93 (250)
265 PRK08293 3-hydroxybutyryl-CoA 96.6 0.0062 1.4E-07 69.0 9.0 75 565-644 3-95 (287)
266 PRK14619 NAD(P)H-dependent gly 96.6 0.0043 9.3E-08 71.0 7.7 62 564-650 3-64 (308)
267 PRK15182 Vi polysaccharide bio 96.6 0.0092 2E-07 71.7 10.8 116 564-697 5-129 (425)
268 PF00106 adh_short: short chai 96.6 0.0051 1.1E-07 62.6 7.5 76 566-643 1-90 (167)
269 TIGR01381 E1_like_apg7 E1-like 96.6 0.0077 1.7E-07 74.8 10.3 102 562-663 335-479 (664)
270 PRK08643 acetoin reductase; Va 96.6 0.0082 1.8E-07 65.6 9.6 76 565-643 2-89 (256)
271 PRK12939 short chain dehydroge 96.6 0.011 2.4E-07 63.9 10.4 77 564-643 6-94 (250)
272 TIGR03206 benzo_BadH 2-hydroxy 96.6 0.0094 2E-07 64.6 9.9 77 564-643 2-90 (250)
273 PRK08664 aspartate-semialdehyd 96.6 0.0061 1.3E-07 71.3 9.0 94 565-664 3-107 (349)
274 PRK13394 3-hydroxybutyrate deh 96.6 0.0078 1.7E-07 65.6 9.3 77 564-643 6-94 (262)
275 TIGR01851 argC_other N-acetyl- 96.6 0.0058 1.3E-07 70.4 8.5 77 566-664 2-80 (310)
276 PRK07877 hypothetical protein; 96.6 0.006 1.3E-07 77.4 9.5 101 560-664 102-228 (722)
277 PRK07666 fabG 3-ketoacyl-(acyl 96.6 0.0086 1.9E-07 64.7 9.5 77 564-643 6-94 (239)
278 PRK07063 short chain dehydroge 96.6 0.0092 2E-07 65.4 9.8 78 563-643 5-96 (260)
279 PF02826 2-Hacid_dh_C: D-isome 96.6 0.0054 1.2E-07 64.9 7.6 70 562-644 33-102 (178)
280 PLN02712 arogenate dehydrogena 96.6 0.018 3.8E-07 72.9 13.4 95 562-669 49-148 (667)
281 PRK06199 ornithine cyclodeamin 96.6 0.0047 1E-07 73.1 7.8 93 565-663 155-258 (379)
282 PRK05865 hypothetical protein; 96.6 0.019 4E-07 74.3 13.6 107 566-682 1-118 (854)
283 PRK07067 sorbitol dehydrogenas 96.6 0.01 2.2E-07 64.9 10.0 76 564-642 5-89 (257)
284 PRK05875 short chain dehydroge 96.6 0.0096 2.1E-07 65.9 9.8 76 564-642 6-95 (276)
285 PRK09466 metL bifunctional asp 96.6 0.016 3.4E-07 74.7 12.9 161 553-722 446-632 (810)
286 PRK03659 glutathione-regulated 96.6 0.018 4E-07 72.0 13.2 112 565-685 400-515 (601)
287 PRK07074 short chain dehydroge 96.6 0.0097 2.1E-07 65.0 9.6 75 565-642 2-86 (257)
288 cd01080 NAD_bind_m-THF_DH_Cycl 96.6 0.0061 1.3E-07 64.5 7.6 75 562-664 41-116 (168)
289 PRK06197 short chain dehydroge 96.5 0.01 2.2E-07 67.2 9.9 79 562-643 13-105 (306)
290 PRK08339 short chain dehydroge 96.5 0.012 2.5E-07 65.5 10.1 76 564-642 7-94 (263)
291 TIGR02622 CDP_4_6_dhtase CDP-g 96.5 0.0061 1.3E-07 70.3 8.2 76 564-642 3-84 (349)
292 PRK06718 precorrin-2 dehydroge 96.5 0.015 3.2E-07 63.2 10.6 89 563-661 8-98 (202)
293 PRK07478 short chain dehydroge 96.5 0.012 2.7E-07 64.2 10.1 77 564-643 5-93 (254)
294 PF02719 Polysacc_synt_2: Poly 96.5 0.011 2.4E-07 67.6 9.9 74 568-643 1-87 (293)
295 PTZ00325 malate dehydrogenase; 96.5 0.028 6.1E-07 65.3 13.4 151 563-722 6-182 (321)
296 PRK06500 short chain dehydroge 96.5 0.013 2.9E-07 63.4 10.2 77 564-643 5-90 (249)
297 PRK12828 short chain dehydroge 96.5 0.013 2.9E-07 62.6 10.1 77 564-643 6-92 (239)
298 PRK06139 short chain dehydroge 96.5 0.013 2.8E-07 67.9 10.6 78 563-643 5-94 (330)
299 PRK08605 D-lactate dehydrogena 96.5 0.0099 2.1E-07 69.2 9.5 88 563-664 144-236 (332)
300 PRK07576 short chain dehydroge 96.5 0.0093 2E-07 66.0 8.8 77 563-642 7-95 (264)
301 PRK06172 short chain dehydroge 96.5 0.011 2.4E-07 64.5 9.2 77 564-643 6-94 (253)
302 TIGR01472 gmd GDP-mannose 4,6- 96.5 0.0078 1.7E-07 69.2 8.4 74 566-642 1-87 (343)
303 COG0287 TyrA Prephenate dehydr 96.5 0.014 3.1E-07 66.5 10.3 94 564-665 2-99 (279)
304 PRK03562 glutathione-regulated 96.5 0.023 5.1E-07 71.4 13.2 87 565-656 400-488 (621)
305 PRK09436 thrA bifunctional asp 96.5 0.029 6.3E-07 72.6 14.3 147 562-720 462-636 (819)
306 PRK08277 D-mannonate oxidoredu 96.5 0.013 2.9E-07 64.9 9.9 77 564-643 9-97 (278)
307 PLN02260 probable rhamnose bio 96.4 0.016 3.5E-07 73.0 11.8 79 563-643 4-90 (668)
308 PRK05876 short chain dehydroge 96.4 0.0092 2E-07 66.8 8.7 78 563-643 4-93 (275)
309 cd01489 Uba2_SUMO Ubiquitin ac 96.4 0.012 2.6E-07 68.1 9.6 95 567-663 1-121 (312)
310 PRK06179 short chain dehydroge 96.4 0.0062 1.3E-07 67.2 7.2 72 565-643 4-83 (270)
311 PRK07109 short chain dehydroge 96.4 0.015 3.2E-07 67.3 10.6 78 563-643 6-95 (334)
312 PRK06181 short chain dehydroge 96.4 0.012 2.7E-07 64.5 9.4 76 565-643 1-88 (263)
313 PF04455 Saccharop_dh_N: LOR/S 96.4 0.00023 5E-09 69.4 -3.6 43 499-558 7-49 (103)
314 PRK08251 short chain dehydroge 96.4 0.013 2.9E-07 63.5 9.5 76 565-643 2-91 (248)
315 PRK12936 3-ketoacyl-(acyl-carr 96.4 0.014 3.1E-07 62.9 9.6 77 564-643 5-90 (245)
316 PRK07677 short chain dehydroge 96.4 0.011 2.4E-07 64.6 8.9 74 566-642 2-87 (252)
317 PRK08263 short chain dehydroge 96.4 0.011 2.4E-07 65.6 9.0 76 565-643 3-87 (275)
318 PRK08264 short chain dehydroge 96.4 0.012 2.5E-07 63.5 9.0 75 564-643 5-83 (238)
319 PRK06124 gluconate 5-dehydroge 96.4 0.013 2.8E-07 64.1 9.3 78 563-643 9-98 (256)
320 PRK09072 short chain dehydroge 96.4 0.013 2.8E-07 64.5 9.3 77 564-643 4-90 (263)
321 cd01484 E1-2_like Ubiquitin ac 96.4 0.015 3.2E-07 64.7 9.7 95 567-663 1-122 (234)
322 TIGR01963 PHB_DH 3-hydroxybuty 96.4 0.015 3.2E-07 63.1 9.6 75 565-642 1-87 (255)
323 PLN02696 1-deoxy-D-xylulose-5- 96.4 0.031 6.7E-07 67.2 12.8 121 564-686 56-204 (454)
324 PRK14851 hypothetical protein; 96.4 0.016 3.5E-07 73.3 10.9 98 563-663 41-166 (679)
325 PRK08040 putative semialdehyde 96.4 0.0077 1.7E-07 70.3 7.6 92 564-664 3-97 (336)
326 PRK07819 3-hydroxybutyryl-CoA 96.4 0.019 4.1E-07 65.5 10.6 77 564-646 4-97 (286)
327 PRK05854 short chain dehydroge 96.4 0.014 3.1E-07 66.6 9.7 77 563-642 12-102 (313)
328 TIGR01296 asd_B aspartate-semi 96.4 0.0073 1.6E-07 70.5 7.4 89 567-664 1-92 (339)
329 PRK08213 gluconate 5-dehydroge 96.3 0.014 3E-07 64.0 9.2 78 563-643 10-99 (259)
330 PRK08085 gluconate 5-dehydroge 96.3 0.013 2.7E-07 64.2 8.8 77 564-643 8-96 (254)
331 PRK06953 short chain dehydroge 96.3 0.014 3E-07 62.8 8.9 74 565-643 1-80 (222)
332 PRK05872 short chain dehydroge 96.3 0.019 4.2E-07 64.9 10.4 78 563-643 7-95 (296)
333 PRK10675 UDP-galactose-4-epime 96.3 0.023 5E-07 64.8 11.1 74 566-642 1-82 (338)
334 PRK13403 ketol-acid reductoiso 96.3 0.013 2.9E-07 67.8 9.0 73 559-644 10-82 (335)
335 PLN02572 UDP-sulfoquinovose sy 96.3 0.018 4E-07 69.3 10.6 77 562-641 44-144 (442)
336 PRK12439 NAD(P)H-dependent gly 96.3 0.01 2.2E-07 69.2 8.1 83 563-651 5-95 (341)
337 PRK12384 sorbitol-6-phosphate 96.3 0.014 3E-07 63.9 8.8 76 565-643 2-91 (259)
338 PRK08589 short chain dehydroge 96.3 0.014 3.1E-07 64.8 8.8 76 564-643 5-92 (272)
339 PRK06522 2-dehydropantoate 2-r 96.3 0.027 5.7E-07 63.6 11.0 80 566-651 1-84 (304)
340 TIGR01179 galE UDP-glucose-4-e 96.2 0.023 5E-07 63.6 10.5 74 567-643 1-80 (328)
341 PRK05786 fabG 3-ketoacyl-(acyl 96.2 0.015 3.2E-07 62.6 8.6 77 564-643 4-91 (238)
342 TIGR01214 rmlD dTDP-4-dehydror 96.2 0.014 3.1E-07 64.8 8.8 57 567-643 1-60 (287)
343 PLN02928 oxidoreductase family 96.2 0.011 2.4E-07 69.2 8.2 110 192-342 156-266 (347)
344 PRK12827 short chain dehydroge 96.2 0.076 1.7E-06 57.3 14.1 77 564-643 5-97 (249)
345 COG4221 Short-chain alcohol de 96.2 0.023 4.9E-07 63.3 10.0 77 565-644 6-92 (246)
346 PRK13243 glyoxylate reductase; 96.2 0.018 3.9E-07 67.1 9.8 68 563-644 148-215 (333)
347 cd01076 NAD_bind_1_Glu_DH NAD( 96.2 0.026 5.5E-07 62.5 10.4 113 562-686 28-157 (227)
348 PRK07062 short chain dehydroge 96.2 0.017 3.6E-07 63.6 9.0 77 564-643 7-97 (265)
349 PRK08063 enoyl-(acyl carrier p 96.2 0.019 4.2E-07 62.2 9.3 75 565-642 4-91 (250)
350 TIGR02130 dapB_plant dihydrodi 96.2 0.038 8.2E-07 62.8 11.7 126 566-697 1-132 (275)
351 PRK06940 short chain dehydroge 96.2 0.017 3.7E-07 64.6 9.1 74 566-643 3-86 (275)
352 PF04321 RmlD_sub_bind: RmlD s 96.2 0.008 1.7E-07 68.2 6.4 58 566-643 1-61 (286)
353 PLN00203 glutamyl-tRNA reducta 96.2 0.032 6.9E-07 68.7 11.9 108 193-338 264-371 (519)
354 PRK12367 short chain dehydroge 96.2 0.018 4E-07 63.8 9.1 77 562-643 11-89 (245)
355 PRK05650 short chain dehydroge 96.2 0.023 4.9E-07 63.0 9.7 75 566-643 1-87 (270)
356 PRK10217 dTDP-glucose 4,6-dehy 96.2 0.013 2.8E-07 67.5 8.1 76 565-642 1-83 (355)
357 PRK07530 3-hydroxybutyryl-CoA 96.2 0.027 6E-07 63.9 10.5 75 565-645 4-95 (292)
358 PRK06924 short chain dehydroge 96.2 0.014 3E-07 63.5 7.9 66 565-633 1-69 (251)
359 PRK07097 gluconate 5-dehydroge 96.1 0.023 5E-07 62.7 9.6 77 564-643 9-97 (265)
360 PRK07775 short chain dehydroge 96.1 0.024 5.1E-07 63.2 9.8 77 563-642 8-96 (274)
361 TIGR01470 cysG_Nterm siroheme 96.1 0.033 7.2E-07 60.7 10.6 91 563-662 7-99 (205)
362 PRK12825 fabG 3-ketoacyl-(acyl 96.1 0.015 3.3E-07 62.3 8.0 77 563-642 4-93 (249)
363 PRK12746 short chain dehydroge 96.1 0.024 5.1E-07 61.8 9.5 75 565-642 6-99 (254)
364 PRK09242 tropinone reductase; 96.1 0.021 4.6E-07 62.5 9.2 77 564-643 8-98 (257)
365 PRK06035 3-hydroxyacyl-CoA deh 96.1 0.024 5.2E-07 64.4 9.8 40 565-605 3-42 (291)
366 PRK06914 short chain dehydroge 96.1 0.019 4E-07 63.8 8.8 74 565-642 3-90 (280)
367 PRK06935 2-deoxy-D-gluconate 3 96.1 0.026 5.7E-07 61.9 9.8 77 563-643 13-101 (258)
368 TIGR01832 kduD 2-deoxy-D-gluco 96.1 0.022 4.8E-07 61.8 9.1 78 563-643 3-90 (248)
369 PRK06545 prephenate dehydrogen 96.1 0.03 6.6E-07 65.7 10.9 94 566-667 1-98 (359)
370 PTZ00079 NADP-specific glutama 96.1 0.062 1.3E-06 64.9 13.4 144 562-746 234-406 (454)
371 PRK09135 pteridine reductase; 96.1 0.019 4.2E-07 61.9 8.5 75 565-642 6-94 (249)
372 PRK07806 short chain dehydroge 96.1 0.026 5.6E-07 61.3 9.5 76 565-643 6-94 (248)
373 PRK07424 bifunctional sterol d 96.1 0.029 6.2E-07 67.2 10.6 78 563-643 176-255 (406)
374 PRK07035 short chain dehydroge 96.1 0.031 6.7E-07 61.0 10.1 78 563-643 6-95 (252)
375 PRK06947 glucose-1-dehydrogena 96.1 0.024 5.2E-07 61.5 9.2 75 565-642 2-89 (248)
376 COG0451 WcaG Nucleoside-diphos 96.1 0.022 4.7E-07 63.7 9.1 73 566-644 1-75 (314)
377 PRK14620 NAD(P)H-dependent gly 96.1 0.023 5E-07 65.4 9.5 82 566-652 1-90 (326)
378 PRK00045 hemA glutamyl-tRNA re 96.1 0.036 7.8E-07 66.6 11.4 129 193-388 180-308 (423)
379 PRK14106 murD UDP-N-acetylmura 96.1 0.029 6.2E-07 67.2 10.6 91 564-662 4-97 (450)
380 PRK08268 3-hydroxy-acyl-CoA de 96.1 0.024 5.2E-07 69.6 10.1 100 564-669 6-128 (507)
381 PF02737 3HCDH_N: 3-hydroxyacy 96.0 0.0084 1.8E-07 63.9 5.4 74 567-646 1-91 (180)
382 PLN02545 3-hydroxybutyryl-CoA 96.0 0.028 6.1E-07 63.9 10.0 40 564-604 3-42 (295)
383 PRK06113 7-alpha-hydroxysteroi 96.0 0.02 4.3E-07 62.8 8.4 76 564-642 10-97 (255)
384 PRK12742 oxidoreductase; Provi 96.0 0.024 5.3E-07 61.0 9.0 76 564-643 5-85 (237)
385 PLN02206 UDP-glucuronate decar 96.0 0.041 8.9E-07 66.5 11.8 71 564-642 118-192 (442)
386 cd05291 HicDH_like L-2-hydroxy 96.0 0.0076 1.6E-07 69.1 5.2 72 566-643 1-78 (306)
387 PRK06728 aspartate-semialdehyd 96.0 0.019 4.1E-07 67.3 8.5 91 565-664 5-99 (347)
388 PRK07856 short chain dehydroge 96.0 0.019 4E-07 62.9 8.0 72 564-642 5-84 (252)
389 TIGR02415 23BDH acetoin reduct 96.0 0.023 5E-07 61.8 8.7 75 566-643 1-87 (254)
390 PLN02166 dTDP-glucose 4,6-dehy 96.0 0.035 7.5E-07 67.0 10.9 71 564-642 119-193 (436)
391 PRK08217 fabG 3-ketoacyl-(acyl 96.0 0.026 5.7E-07 61.0 9.0 77 564-643 4-92 (253)
392 PLN02653 GDP-mannose 4,6-dehyd 96.0 0.015 3.2E-07 66.8 7.5 77 563-642 4-92 (340)
393 PRK12480 D-lactate dehydrogena 96.0 0.022 4.7E-07 66.4 8.8 67 563-645 144-210 (330)
394 PRK08628 short chain dehydroge 96.0 0.029 6.3E-07 61.4 9.3 76 563-642 5-92 (258)
395 PRK06483 dihydromonapterin red 96.0 0.025 5.5E-07 61.1 8.7 74 565-642 2-83 (236)
396 PRK12921 2-dehydropantoate 2-r 95.9 0.033 7.2E-07 63.0 9.9 80 566-651 1-86 (305)
397 PTZ00117 malate dehydrogenase; 95.9 0.083 1.8E-06 61.3 13.2 73 564-641 4-81 (319)
398 PRK05678 succinyl-CoA syntheta 95.9 0.038 8.2E-07 63.4 10.2 110 564-689 7-126 (291)
399 PRK08642 fabG 3-ketoacyl-(acyl 95.9 0.028 6E-07 61.1 8.7 75 565-642 5-90 (253)
400 COG1004 Ugd Predicted UDP-gluc 95.9 0.033 7E-07 65.8 9.7 119 566-700 1-132 (414)
401 PLN02383 aspartate semialdehyd 95.9 0.021 4.6E-07 66.8 8.3 92 564-664 6-100 (344)
402 PRK08324 short chain dehydroge 95.9 0.057 1.2E-06 68.5 12.8 77 564-643 421-508 (681)
403 PLN03139 formate dehydrogenase 95.9 0.038 8.3E-07 65.7 10.5 70 563-644 197-266 (386)
404 PRK06198 short chain dehydroge 95.9 0.035 7.6E-07 60.7 9.5 76 564-642 5-93 (260)
405 PRK06598 aspartate-semialdehyd 95.9 0.019 4.2E-07 67.7 7.9 92 565-664 1-98 (369)
406 PRK12823 benD 1,6-dihydroxycyc 95.9 0.042 9E-07 60.2 10.1 76 563-642 6-93 (260)
407 KOG1209|consensus 95.9 0.026 5.7E-07 61.6 8.1 79 564-646 6-94 (289)
408 TIGR01289 LPOR light-dependent 95.9 0.034 7.4E-07 63.6 9.7 77 564-642 2-90 (314)
409 PTZ00075 Adenosylhomocysteinas 95.9 0.031 6.8E-07 67.8 9.6 84 192-311 251-334 (476)
410 cd01491 Ube1_repeat1 Ubiquitin 95.8 0.02 4.4E-07 65.4 7.6 96 563-663 17-136 (286)
411 PRK07831 short chain dehydroge 95.8 0.038 8.2E-07 60.8 9.5 77 564-643 16-107 (262)
412 PRK05808 3-hydroxybutyryl-CoA 95.8 0.057 1.2E-06 61.1 11.1 38 565-603 3-40 (282)
413 PLN02928 oxidoreductase family 95.8 0.023 5E-07 66.6 8.2 79 563-644 157-237 (347)
414 PRK00066 ldh L-lactate dehydro 95.8 0.091 2E-06 60.9 13.0 76 563-642 4-82 (315)
415 COG1088 RfbB dTDP-D-glucose 4, 95.8 0.026 5.7E-07 64.3 8.1 74 566-642 1-83 (340)
416 TIGR00243 Dxr 1-deoxy-D-xylulo 95.8 0.085 1.8E-06 62.4 12.6 121 565-686 1-148 (389)
417 COG0059 IlvC Ketol-acid reduct 95.8 0.023 4.9E-07 64.9 7.6 81 562-654 15-95 (338)
418 PRK09730 putative NAD(P)-bindi 95.8 0.03 6.5E-07 60.4 8.4 76 565-643 1-89 (247)
419 COG1179 Dinucleotide-utilizing 95.8 0.034 7.4E-07 61.8 8.7 109 553-663 18-152 (263)
420 PRK07023 short chain dehydroge 95.8 0.025 5.4E-07 61.4 7.7 73 565-642 1-86 (243)
421 PRK05855 short chain dehydroge 95.8 0.031 6.7E-07 68.0 9.3 77 564-643 314-402 (582)
422 PRK08017 oxidoreductase; Provi 95.8 0.032 7E-07 60.7 8.6 73 565-642 2-83 (256)
423 PRK06125 short chain dehydroge 95.8 0.04 8.7E-07 60.5 9.3 76 564-642 6-90 (259)
424 PRK08229 2-dehydropantoate 2-r 95.8 0.053 1.2E-06 62.6 10.7 77 564-649 1-89 (341)
425 PF00670 AdoHcyase_NAD: S-aden 95.8 0.028 6.1E-07 59.2 7.6 67 564-643 22-88 (162)
426 TIGR03376 glycerol3P_DH glycer 95.7 0.037 8E-07 64.9 9.4 82 567-652 1-101 (342)
427 PRK12480 D-lactate dehydrogena 95.7 0.13 2.8E-06 60.0 13.9 97 192-343 143-239 (330)
428 PRK14806 bifunctional cyclohex 95.7 0.056 1.2E-06 69.0 11.7 112 565-685 3-119 (735)
429 COG0677 WecC UDP-N-acetyl-D-ma 95.7 0.053 1.1E-06 64.0 10.3 123 565-705 9-145 (436)
430 PRK06841 short chain dehydroge 95.7 0.045 9.6E-07 59.7 9.4 76 564-643 14-99 (255)
431 PRK06463 fabG 3-ketoacyl-(acyl 95.7 0.045 9.7E-07 60.0 9.4 75 564-643 6-89 (255)
432 TIGR01035 hemA glutamyl-tRNA r 95.7 0.058 1.3E-06 64.7 11.1 128 193-388 178-305 (417)
433 PRK06223 malate dehydrogenase; 95.7 0.079 1.7E-06 60.6 11.7 72 565-641 2-78 (307)
434 PRK00676 hemA glutamyl-tRNA re 95.7 0.029 6.4E-07 65.5 8.2 88 562-665 171-262 (338)
435 PRK07533 enoyl-(acyl carrier p 95.7 0.037 8E-07 61.2 8.7 76 564-642 9-97 (258)
436 PRK12937 short chain dehydroge 95.7 0.05 1.1E-06 58.7 9.5 77 564-643 4-93 (245)
437 PRK08226 short chain dehydroge 95.7 0.051 1.1E-06 59.7 9.6 76 564-642 5-91 (263)
438 PRK09134 short chain dehydroge 95.7 0.038 8.3E-07 60.7 8.7 76 564-642 8-96 (258)
439 PRK07832 short chain dehydroge 95.7 0.042 9.1E-07 61.0 9.1 75 566-643 1-88 (272)
440 PRK14030 glutamate dehydrogena 95.6 0.12 2.5E-06 62.6 13.3 145 562-747 225-398 (445)
441 PRK07201 short chain dehydroge 95.6 0.046 1E-06 68.3 10.4 78 563-643 369-458 (657)
442 TIGR01532 E4PD_g-proteo D-eryt 95.6 0.072 1.6E-06 62.1 11.1 99 567-665 1-121 (325)
443 COG1023 Gnd Predicted 6-phosph 95.6 0.12 2.7E-06 57.4 12.1 119 566-695 1-125 (300)
444 PRK08862 short chain dehydroge 95.6 0.056 1.2E-06 59.1 9.7 76 564-642 4-92 (227)
445 PRK12935 acetoacetyl-CoA reduc 95.6 0.044 9.4E-07 59.5 8.8 77 564-643 5-94 (247)
446 PLN02477 glutamate dehydrogena 95.6 0.093 2E-06 62.9 12.2 142 562-747 203-365 (410)
447 PRK05599 hypothetical protein; 95.6 0.044 9.5E-07 60.2 8.9 73 566-642 1-86 (246)
448 PRK07984 enoyl-(acyl carrier p 95.6 0.035 7.6E-07 62.0 8.2 76 565-643 6-94 (262)
449 COG1091 RfbD dTDP-4-dehydrorha 95.6 0.027 5.9E-07 64.1 7.4 58 566-644 1-61 (281)
450 PRK08605 D-lactate dehydrogena 95.6 0.16 3.5E-06 59.2 13.9 93 192-336 143-236 (332)
451 PF13241 NAD_binding_7: Putati 95.6 0.022 4.8E-07 55.2 5.8 86 563-663 5-91 (103)
452 PRK08703 short chain dehydroge 95.6 0.061 1.3E-06 58.3 9.9 78 564-642 5-96 (239)
453 PRK14192 bifunctional 5,10-met 95.6 0.031 6.8E-07 63.8 7.9 76 563-666 157-233 (283)
454 PLN02700 homoserine dehydrogen 95.6 0.12 2.5E-06 61.4 12.7 81 633-720 109-194 (377)
455 PRK10084 dTDP-glucose 4,6 dehy 95.6 0.036 7.8E-07 63.8 8.5 76 566-643 1-83 (352)
456 COG1086 Predicted nucleoside-d 95.6 0.067 1.5E-06 65.6 10.9 100 563-664 248-375 (588)
457 PRK09414 glutamate dehydrogena 95.6 0.17 3.6E-06 61.4 14.1 136 562-722 229-384 (445)
458 cd05313 NAD_bind_2_Glu_DH NAD( 95.6 0.13 2.8E-06 58.1 12.4 145 562-747 35-208 (254)
459 TIGR00465 ilvC ketol-acid redu 95.6 0.045 9.7E-07 63.5 9.1 68 564-644 2-70 (314)
460 PRK07574 formate dehydrogenase 95.6 0.065 1.4E-06 63.8 10.6 109 562-682 189-303 (385)
461 PRK13243 glyoxylate reductase; 95.5 0.038 8.3E-07 64.4 8.5 94 192-336 147-240 (333)
462 PF00056 Ldh_1_N: lactate/mala 95.5 0.0099 2.2E-07 60.9 3.3 71 566-643 1-79 (141)
463 PRK06114 short chain dehydroge 95.5 0.043 9.4E-07 60.2 8.5 77 564-643 7-96 (254)
464 cd01080 NAD_bind_m-THF_DH_Cycl 95.5 0.059 1.3E-06 57.2 9.0 78 192-339 41-119 (168)
465 cd01490 Ube1_repeat2 Ubiquitin 95.5 0.07 1.5E-06 64.3 10.7 97 567-664 1-130 (435)
466 COG0111 SerA Phosphoglycerate 95.5 0.43 9.3E-06 55.7 16.8 88 192-311 139-226 (324)
467 PRK06398 aldose dehydrogenase; 95.5 0.035 7.5E-07 61.4 7.6 70 563-642 4-81 (258)
468 COG1087 GalE UDP-glucose 4-epi 95.5 0.06 1.3E-06 61.7 9.5 72 566-642 1-76 (329)
469 PRK12745 3-ketoacyl-(acyl-carr 95.5 0.062 1.3E-06 58.6 9.4 75 565-642 2-89 (256)
470 PRK08278 short chain dehydroge 95.5 0.071 1.5E-06 59.5 10.1 77 564-643 5-100 (273)
471 PTZ00345 glycerol-3-phosphate 95.5 0.035 7.6E-07 65.6 7.9 84 565-652 11-112 (365)
472 PRK08415 enoyl-(acyl carrier p 95.5 0.053 1.1E-06 61.0 9.0 77 564-643 4-93 (274)
473 TIGR00561 pntA NAD(P) transhyd 95.5 0.074 1.6E-06 65.3 10.8 97 565-664 164-284 (511)
474 PRK12824 acetoacetyl-CoA reduc 95.4 0.061 1.3E-06 58.0 9.2 76 565-643 2-90 (245)
475 PRK05557 fabG 3-ketoacyl-(acyl 95.4 0.067 1.5E-06 57.4 9.5 77 564-643 4-93 (248)
476 KOG2017|consensus 95.4 0.032 7E-07 64.4 7.2 104 559-664 60-188 (427)
477 TIGR01019 sucCoAalpha succinyl 95.4 0.078 1.7E-06 60.8 10.3 111 564-689 5-124 (286)
478 PRK00141 murD UDP-N-acetylmura 95.4 0.08 1.7E-06 64.4 11.1 92 562-662 12-103 (473)
479 PRK08416 7-alpha-hydroxysteroi 95.4 0.055 1.2E-06 59.6 8.9 77 563-642 6-96 (260)
480 PRK08159 enoyl-(acyl carrier p 95.4 0.054 1.2E-06 60.7 8.9 76 565-643 10-98 (272)
481 PLN02775 Probable dihydrodipic 95.4 0.15 3.2E-06 58.5 12.2 125 564-698 10-144 (286)
482 PRK07792 fabG 3-ketoacyl-(acyl 95.4 0.063 1.4E-06 61.2 9.4 78 563-643 10-99 (306)
483 COG0476 ThiF Dinucleotide-util 95.4 0.096 2.1E-06 58.5 10.6 99 563-664 28-152 (254)
484 PRK15469 ghrA bifunctional gly 95.4 0.02 4.3E-07 66.2 5.3 68 563-644 134-201 (312)
485 PRK07201 short chain dehydroge 95.3 0.11 2.3E-06 65.2 12.1 76 566-642 1-86 (657)
486 TIGR02279 PaaC-3OHAcCoADH 3-hy 95.3 0.038 8.3E-07 67.8 8.0 77 564-646 4-97 (503)
487 PRK08220 2,3-dihydroxybenzoate 95.3 0.053 1.2E-06 58.9 8.2 72 564-643 7-86 (252)
488 TIGR03450 mycothiol_INO1 inosi 95.3 0.16 3.4E-06 59.2 12.1 157 566-723 1-218 (351)
489 PRK12481 2-deoxy-D-gluconate 3 95.3 0.083 1.8E-06 58.1 9.8 77 564-643 7-93 (251)
490 TIGR02632 RhaD_aldol-ADH rhamn 95.3 0.059 1.3E-06 68.5 9.7 78 563-643 412-503 (676)
491 PRK06505 enoyl-(acyl carrier p 95.3 0.061 1.3E-06 60.2 8.8 77 564-643 6-95 (271)
492 PRK12743 oxidoreductase; Provi 95.3 0.069 1.5E-06 58.7 9.1 76 565-643 2-90 (256)
493 PRK11199 tyrA bifunctional cho 95.3 0.071 1.5E-06 63.1 9.7 78 564-666 97-177 (374)
494 cd05297 GH4_alpha_glucosidase_ 95.3 0.055 1.2E-06 65.1 8.9 89 566-658 1-102 (423)
495 PRK07069 short chain dehydroge 95.3 0.05 1.1E-06 58.9 7.8 73 567-642 1-88 (251)
496 PRK09424 pntA NAD(P) transhydr 95.3 0.14 3E-06 63.0 12.4 100 563-665 163-286 (509)
497 TIGR01327 PGDH D-3-phosphoglyc 95.2 1.4 3E-05 54.7 21.1 100 192-343 135-234 (525)
498 PLN02358 glyceraldehyde-3-phos 95.2 0.1 2.2E-06 61.2 10.6 101 565-665 5-127 (338)
499 PRK07370 enoyl-(acyl carrier p 95.2 0.05 1.1E-06 60.2 7.8 77 564-643 5-97 (258)
500 PRK05476 S-adenosyl-L-homocyst 95.2 0.053 1.1E-06 65.3 8.3 82 194-311 211-292 (425)
No 1
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=100.00 E-value=3.4e-202 Score=1868.12 Aligned_cols=919 Identities=40% Similarity=0.688 Sum_probs=839.2
Q ss_pred CcEEEEEecCCCCCCceeecChHHHHHHHhCCC-----EEEEeCCCCCCCCchHHhhcCcEEccCccCCcEEEEecCCCc
Q psy12817 2 GKVIAIRREDQSVWERRAALAPSNVKRLVRSGV-----KVIVQPSNRRAYPVQAYANAGAIIQEDISEASIIFGVKQVPV 76 (1201)
Q Consensus 2 ~~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~-----~VlVE~sagr~f~D~eY~~AGA~I~edls~adiIlgVKepp~ 76 (1201)
+.+|||+||++++|||||||||++|++|++.|+ +|+||+|++|+|+|++|++|||+|++++++||+|||||+|++
T Consensus 5 ~~~IgI~kE~~~~~E~RVaLtP~~v~~L~~~G~~~~~~~V~VE~gA~a~f~D~~Y~~AGA~I~~~~~~adiIl~VkeP~~ 84 (1042)
T PLN02819 5 NGVVGILAETVNKWERRAPLTPSHCARLLHSGKDRTVSRIIVQPSSKRIHHDAQYEDVGCEISEDLSDCGLILGVKQPKL 84 (1042)
T ss_pred CcEEEEEecCCCCCCCccCcCHHHHHHHHHCCCCCCCCEEEEcCCCCCCCChHHHHHCCCEEECCCCCCCEEEEECCCCH
Confidence 678999999855699999999999999999998 999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccCCC
Q psy12817 77 DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHT 156 (1201)
Q Consensus 77 ~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~t 156 (1201)
+.++++++|++|+|++|+|++|++++++|+++++|+||||.|+|++|+|+++||+|||++|++++||++|+|+|++++||
T Consensus 85 eell~~~~~i~fs~~~~aq~~n~~ll~~l~~k~it~~ayE~i~~~~G~rl~~fg~~AG~~g~~~~l~~~g~~~L~~~~~~ 164 (1042)
T PLN02819 85 EMLLPDRAYAFFSHTHKAQPENMPLLDKILEERVSLFDYELIVGDHGKRLVAFGKYAGRAGMIDFFRGLGQRLLSLGYST 164 (1042)
T ss_pred HHhcCCCEEEEEecccccccCCHHHHHHHHHcCCeEEEEeceECCCCCEEeechHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhh----
Q psy12817 157 PFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAE---- 232 (1201)
Q Consensus 157 Pfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~---- 232 (1201)
|||+++++|+|+|+++|++||+++|++|++||+|+.++|++|||||+||||+||+++|+.|||++|+|++||++..
T Consensus 165 pf~~l~~~~~y~~~~~~~~a~~~~G~~i~~~g~p~gv~P~~vVi~G~G~Vg~gA~~i~~~lg~~~v~~~~l~~l~~~~~~ 244 (1042)
T PLN02819 165 PFLSLGSSYMYSSLAAAKAAVISVGEEIASSGLPLGICPLVFVFTGSGNVSQGAQEIFKLLPHTFVEPSKLPELKGISQN 244 (1042)
T ss_pred cccccccccccCCHHHHHHHHHhccceeeccCCCCCCCCeEEEEeCCchHHHHHHHHHhhcCCCccCHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999779999999999999999999999999999999999999842
Q ss_pred -cCCcc--EEEecchhHHhhHHHhc-CCcccccccccCcccccchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhccc
Q psy12817 233 -HGSNT--KIYACEVRRRNYLERIK-GGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLL 308 (1201)
Q Consensus 233 -~ga~v--kvy~~~~~~~~~~e~~~-gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lm 308 (1201)
.+... ++|+|.+.+++++++++ |++||+.|||+|||+|+|.|+++++|++||||||+||.+++|+|||++|++++|
T Consensus 245 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~f~~~~y~~~Pe~y~s~F~~~~~~~advlIn~i~~~~~~P~lvt~~~~~~~m 324 (1042)
T PLN02819 245 KISTKRVYQVYGCVVTSQDMVEHKDPSKQFDKADYYAHPEHYNPVFHEKIAPYASVIVNCMYWEKRFPRLLTTKQLQDLT 324 (1042)
T ss_pred CccccccceeeeeecChHHHhhccCCccccchhhhccCchhccchhHHHhHhhCCEEEeeeecCCCCCceeCHHHHHHhh
Confidence 22221 39999999999999998 688999999999999999999999999999999999999999999999888889
Q ss_pred CCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCch
Q psy12817 309 RPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLP 388 (1201)
Q Consensus 309 kpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP 388 (1201)
||| + +||+||||||||+||||||++++|||++|||.|||.+++.++++..+||+||||||||++||
T Consensus 325 k~G---------~-----~~l~vI~DVs~D~gG~ie~~~~~Tt~~~P~~~~~~~~~~~~~~~~~~gv~~~~VdNlP~~lP 390 (1042)
T PLN02819 325 RKG---------G-----CPLVGVCDITCDIGGSIEFLNKTTSIEKPFFRYNPSNNSYHDDMDGDGILCMAVDILPTEFA 390 (1042)
T ss_pred cCC---------C-----ccceEEEEEccCCCCCeeecccCCCCcCCeEeecccccccccccCCCCeEEEEECCccccCH
Confidence 998 3 47999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCCCchHHHHHHhhhhcccccc-cccchhhhhh
Q psy12817 389 MEATDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKAD-IQTEESRNVL 467 (1201)
Q Consensus 389 ~eAS~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~~~yi~~lr~~~~~~~~~~~-~~~~~~~~v~ 467 (1201)
+|||++||++|+||+..|++.+.. ...++.|++|+|+++|+||++|+||++||+.+.+...... .|++.+++|.
T Consensus 391 r~AS~~f~n~llpyv~~la~~g~~-----~~~~~~l~~a~~~~~G~lT~~~~yi~~~~~~~~~~~~~~~~~~~~~~~~v~ 465 (1042)
T PLN02819 391 KEASQHFGNILSPFVGSLASMKEL-----AELPSHLRRACIAHRGSLTPLFEYIPRMRNSNAELAQDTVSSQSTFNILVS 465 (1042)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCch-----hccCHHHhcceeeeCCEecCchHHHHHHHhcccccccccccccccceEEEE
Confidence 999999999999999999977631 2468999999999999999999999999998755443322 2345566666
Q ss_pred hccCCcccccchhhccccccchhhcccccccccccccchhccccCCCCcccccCCChhHHHHHHhccCCcCCccccchhh
Q psy12817 468 LLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKDKFISFVQSDASKPIEEHNFSPAVQAAIIASNGELTPKFKYIEDL 547 (1201)
Q Consensus 468 ~~gsg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (1201)
++| ||||+||||+++|.|+..| | +|++++|+
T Consensus 466 l~g--------------------------------hl~d~~lin~~ld~i~~~g-------------g----~~~~~~~~ 496 (1042)
T PLN02819 466 LSG--------------------------------HLFDKFLINEALDVIEAAG-------------G----SFHLAKCQ 496 (1042)
T ss_pred eee--------------------------------ecccchhhhhhhhhhhccC-------------C----ceeeeeec
Confidence 655 9999999999999999876 4 78888888
Q ss_pred hhhhhccccccccc-------------------------------------------------------ccCCCeEEEEc
Q psy12817 548 RQQSVKSRHKADIQ-------------------------------------------------------TEESRNVLLLG 572 (1201)
Q Consensus 548 ~~q~~~~~s~~~~~-------------------------------------------------------~~~mkKVLILG 572 (1201)
.+|+.++.|++.++ ...|+||+|||
T Consensus 497 ~gqs~~~~S~~~l~v~a~d~~~L~~i~~~l~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rIlVLG 576 (1042)
T PLN02819 497 VGQSADAESYSELEVGADDKEVLDQIIDSLTRLANPNEDYISPAREANKIFLKIGKVQQENECNEKAEVTKKSQNVLILG 576 (1042)
T ss_pred cccCcccccceeeecccCcHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhcccccccccccccccccCCcEEEEC
Confidence 88888777777654 12488999999
Q ss_pred CchhHHHHHHHHHhCCCCe-------------EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 573 AGYVSRPLIEYLHRDENIH-------------ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 573 AG~VG~~va~~La~~~~~~-------------VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
||+||++++++|++.++.+ |+|+|++.++++++++.+++++++.+|+.| .+++.++++++|+||+
T Consensus 577 AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D--~e~L~~~v~~~DaVIs 654 (1042)
T PLN02819 577 AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSD--SESLLKYVSQVDVVIS 654 (1042)
T ss_pred CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCC--HHHHHHhhcCCCEEEE
Confidence 9999999999999877655 999999999999999988888999999998 8899999999999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEee
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSY 719 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~ 719 (1201)
|+|+.+|..++++|+++|+||||++|.++++++|+++|+++|+++++++|||||++||+|++++++.++.+|+|.+|.+|
T Consensus 655 alP~~~H~~VAkaAieaGkHvv~eky~~~e~~~L~e~Ak~AGV~~m~e~GlDPGid~~lA~~~Id~~~~~~GkI~s~~s~ 734 (1042)
T PLN02819 655 LLPASCHAVVAKACIELKKHLVTASYVSEEMSALDSKAKEAGITILCEMGLDPGIDHMMAMKMIDDAHERGGKVKSFTSY 734 (1042)
T ss_pred CCCchhhHHHHHHHHHcCCCEEECcCCHHHHHHHHHHHHHcCCEEEECCccCHHHHHHHHHHHHHhhcccCCcEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999899999999999
Q ss_pred cCCCCCCCCCCCccccccccChHHHHHHhccceeeeeCCeEEEecCCcccccccccccc--CCCceEEEeeCCCccchhh
Q psy12817 720 CGGLPAPECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDF--LPGFSFEGFANRDSLRYAQ 797 (1201)
Q Consensus 720 cGGLPaPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l~~~~~~idf--~pg~~lE~ypNRDSl~Y~~ 797 (1201)
|||||+|++++|||+|||||||+|+|++++|||+|++||++++|++. +||+.+++++| +||++||+||||||++|++
T Consensus 735 ~GGLP~pe~~~npL~YkfsWSp~gvi~~~~npa~~i~~G~~~~V~~~-~l~~~~~~~~~~~~p~~~lE~~pNRdSl~y~~ 813 (1042)
T PLN02819 735 CGGLPSPEAANNPLAYKFSWNPAGAIKAGQNPAVYKSNGQIIHVDGE-NLFASAVRFRLPNLPAFALECLPNRDSLVYGE 813 (1042)
T ss_pred EcCccCcccCCCcccccccCCHHHHHHHhcCcceeeECCEEEEecch-hhhhhccccccccCCCcceEEccCCCcchhHH
Confidence 99999999999999999999999999999999999999999999985 99999999876 7999999999999999999
Q ss_pred hcccccccccccccceeccCHHHHHHHHHHcCCCCCCccccCCCCCCccCHHHHHHHHcCCCCCch-----hHHHHHHHH
Q psy12817 798 LYNIAAEAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGLSTSDI-----FYENLKNIV 872 (1201)
Q Consensus 798 ~YgI~~~~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep~~~l~~~~~~it~r~~l~~lL~~~~~~~-----~~~~~~~~~ 872 (1201)
.|||+.+++|++||||||+||+++|++|++|||+++++++++.. +.++||+++++++|+.+.++. .++.+..
T Consensus 814 ~Ygi~~~a~tl~RgTLRy~Gf~~~~~~l~~LGl~~~~~~~~~~~-~~~~tw~~~~~~~l~~~~~~~~~~~~~~~~~~~-- 890 (1042)
T PLN02819 814 LYGIEKEAATIFRGTLRYEGFSMIMATLSKLGLFDSENHPLLST-GKRTTYGALLDALLLQDGHNENGPLAGEEEISK-- 890 (1042)
T ss_pred HhCCCcccceeeEEEEecCCHHHHHHHHHHcCCCCCCccccccC-CCCCCHHHHHHHHhCCCCcccccccccchhHHH--
Confidence 99997789999999999999999999999999999999997754 457899999999999743221 0111111
Q ss_pred HhhhcCcchhHHHhhccccchhhhcccCCCcchhhhHHHhhhhhhhhcccccccccCcceeecccccccccchhhhccch
Q psy12817 873 ADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLG 952 (1201)
Q Consensus 873 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 952 (1201)
T Consensus 891 -------------------------------------------------------------------------------- 890 (1042)
T PLN02819 891 -------------------------------------------------------------------------------- 890 (1042)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhcCCCCCccccCCCcccchhhhHHHHhhhcccccccCCCCCCCCCceeeecCCCccccchhhhhhcCchhHHHHhh
Q psy12817 953 LRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEELVCTL 1032 (1201)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~~~~~~~~~~~~~~ 1032 (1201)
+++..+++
T Consensus 891 -~~~~~~~~----------------------------------------------------------------------- 898 (1042)
T PLN02819 891 -RLAKLGHS----------------------------------------------------------------------- 898 (1042)
T ss_pred -HHHhhhcc-----------------------------------------------------------------------
Confidence 11111111
Q ss_pred ccCCCchhhhhhhhhhhcccchhhHHHHHHHhCCCCCccccCCCCCHHHHHHHHHHhhcCCCCCCccEEEEEeeEEEEeC
Q psy12817 1033 LGLSTSDIFYENLKNIVADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWP 1112 (1201)
Q Consensus 1033 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~h~~~~~~~ 1112 (1201)
........++++|+|||||+++.+...++||+|+||++|++||.|+++|||||||||+|+++|+
T Consensus 899 ----------------~~~~~~~~~~~~l~~lgl~~~~~v~~~~~tp~d~l~~~Le~kl~y~~~e~DmVvl~h~~~~e~~ 962 (1042)
T PLN02819 899 ----------------KNRETAAKAAKTIVFLGLDEETEVPKSCKSIFDVTCYRMEEKLAYSGNEQDMVLLHHEVEVEFP 962 (1042)
T ss_pred ----------------cchhhHHHHHHHhhhhcccccccccCCCCCHHHHHHHHHHHHhCCCCCCCeEEEEEEEEEEEEC
Confidence 0011145779999999999988555578999999999999999999999999999999999999
Q ss_pred CCce-EEEEEeEEEEcCCCC---cchhhhccchhHHHHHHHHHcCccceeeccc
Q psy12817 1113 NRSR-ERKSISLVVYGQPNG---TTAMAKTVGLPAAIAAKMILEGEFFVTTSTS 1162 (1201)
Q Consensus 1113 ~~~~-~~~~~~l~~~g~~~~---~~ama~tvg~p~ai~~~~~l~~~~~~~~~~~ 1162 (1201)
+|++ |++++||++||++++ +||||||||+|+||||+|||+|+|+.||+..
T Consensus 963 ~g~~~~~~t~tlv~~Gd~~~g~~~SAMAktVG~P~aiaa~lil~g~I~~~Gv~~ 1016 (1042)
T PLN02819 963 DSKRIEKHSATLLEFGEIKNGRTTTAMAKTVGIPAAIGALLLLEGKIKTRGVLR 1016 (1042)
T ss_pred CCCceEEEEEEEEEecCcCCCCcccHHHHhhcchHHHHHHHHhCCCcCCCeeeC
Confidence 9998 999999999999985 8999999999999999999999999999976
No 2
>KOG0172|consensus
Probab=100.00 E-value=5.3e-87 Score=742.60 Aligned_cols=418 Identities=43% Similarity=0.705 Sum_probs=394.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCch-HHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSD-NLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e-~L~elI~~~DVVIs~lP 642 (1201)
.+++||++|+|+|+++++++|+++.+++|||++|...+++++...+ +++++.+|+.+ ++ .|.+.+++.|+|++++|
T Consensus 1 ~~~~vlllgsg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~-~~~av~ldv~~--~~~~L~~~v~~~D~viSLlP 77 (445)
T KOG0172|consen 1 TKKGVLLLGSGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGI-NIKAVSLDVAD--EELALRKEVKPLDLVISLLP 77 (445)
T ss_pred CCcceEEecCccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCC-CccceEEEccc--hHHHHHhhhcccceeeeecc
Confidence 3689999999999999999999999999999999999999999887 49999999998 55 89999999999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecCC
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGG 722 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cGG 722 (1201)
+.+|+.|++.|+..++|+++.||+++++++|++.++.+|+++++++|+|||||||+||++|+++|+.||+++||.|||||
T Consensus 78 ~t~h~lVaK~~i~~~~~~vtsSyv~pe~~~L~~~~v~AG~ti~~e~gldpGidhm~a~~ti~~vh~hgg~i~sf~sycGg 157 (445)
T KOG0172|consen 78 YTFHPLVAKGCIITKEDSVTSSYVDPELEELEKAAVPAGSTIMNEIGLDPGIDHMPAMKTIDLVHEHGGKIKSFKSYCGG 157 (445)
T ss_pred chhhHHHHHHHHHhhcccccccccCHHHHhhhhhccCCCceEecccccCcchhhhhhhccchHHHhhcceeeehhhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccccccChHHHHHHhccceeeeeCCeEEEecCCccccccccccccCCCceEEEeeCCCccchhhhcccc
Q psy12817 723 LPAPECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIA 802 (1201)
Q Consensus 723 LPaPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l~~~~~~idf~pg~~lE~ypNRDSl~Y~~~YgI~ 802 (1201)
+|+|+.++||+||||||||.|++++.+++|+|+.||+.++|.+. +++....+++|+||++++|||||||+.|.+.|+|+
T Consensus 158 lpape~s~nplgykfsws~~gvl~a~rnsAky~~~Gkiv~v~g~-~~~~~~~~~~~~pg~al~~yPNrdst~y~evy~I~ 236 (445)
T KOG0172|consen 158 LPAPERSNNPLGYKFSWSPLGVLLALRNSAKYYKNGKIVEVDGG-DLADTATHYDFYPGPALECYPNRDSTEYSEVYGIP 236 (445)
T ss_pred ccChhhCCCCcceeeccchhhhhhhccccchhccCCeEEEeccc-cHHhhccCcccCccccccccCCcchhhHHHHhcch
Confidence 99999999999999999999999999999999999999999886 99999999999999999999999999999999998
Q ss_pred cccccccccceeccCHHHHHHHHHHcCCCCCCccccCCCCCCccCHHHHHHHHcCCCCCchhHHHHHHHHHhhhcCcchh
Q psy12817 803 AEAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGLSTSDIFYENLKNIVADKVGNTGLE 882 (1201)
Q Consensus 803 ~~~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep~~~l~~~~~~it~r~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (1201)
.+++|++||||||+||..+|.+|.++||++.+-.+.+...+..++|.++++++++. .++++++.++.++....+.
T Consensus 237 ~ea~tilrgtlryqgf~~~i~aL~~~G~~~~da~~~~~~~an~L~W~~~~~~~~g~-~~~i~ed~i~~i~~~~~~~---- 311 (445)
T KOG0172|consen 237 REAKTILRGTLRYQGFVLIIGALVRCGLLACDALEKFSIPANILTWKELLTSLGGP-FSEIEEDDIKVICIYLSGK---- 311 (445)
T ss_pred HHHHHHHhcccccccHHHHHHHHHHcCccchhhHhhcCCCCCcccHHHHHHhhcCC-CcCccHHHHHHHHHHhhcC----
Confidence 89999999999999999999999999999999988887778899999999999996 4556666666654443321
Q ss_pred HHHhhccccchhhhcccCCCcchhhhHHHhhhhhhhhcccccccccCcceeecccccccccchhhhccchhhhhhcCCCC
Q psy12817 883 ALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHT 962 (1201)
Q Consensus 883 ~l~~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 (1201)
T Consensus 312 -------------------------------------------------------------------------------- 311 (445)
T KOG0172|consen 312 -------------------------------------------------------------------------------- 311 (445)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCCCcccchhhhHHHHhhhcccccccCCCCCCCCCceeeecCCCccccchhhhhhcCchhHHHHhhccCCCchhhh
Q psy12817 963 PFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEELVCTLLGLSTSDIFY 1042 (1201)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1201)
T Consensus 312 -------------------------------------------------------------------------------- 311 (445)
T KOG0172|consen 312 -------------------------------------------------------------------------------- 311 (445)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhcccchhhHHHHHHHhCCCCCccccCCCCCHHHHHHHHHHhhcCCCCCCccEEEEEeeEEEEeCCCceEEEEEe
Q psy12817 1043 ENLKNIVADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWPNRSRERKSIS 1122 (1201)
Q Consensus 1043 ~~l~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~h~~~~~~~~~~~~~~~~~ 1122 (1201)
..+.+.+++|||+||+. .++.+++++||+|.+|+.+|.|.++|+||++|||+|++++|.|++|+++++
T Consensus 312 -----------~~~~l~~~e~Lg~~~~k-~v~~~~~~~DTl~~~l~~~l~y~~~e~Dmvvl~h~~~~~~p~g~~e~~t~~ 379 (445)
T KOG0172|consen 312 -----------DPRILSTLEWLGLFSDK-LVTVRGVSLDTLCPHLEEPLYYVDTEFDMVVLQHKFGTEPPEGKVESITHT 379 (445)
T ss_pred -----------ccchhhhhHhcCCCccc-cccccCCchhccccccccceeccCCccceeEEEecceeeCCCCceEEeeec
Confidence 12468899999999998 777889999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCcchhhhccchhHHHHHHHHHcCccceeeccc
Q psy12817 1123 LVVYGQPNGTTAMAKTVGLPAAIAAKMILEGEFFVTTSTS 1162 (1201)
Q Consensus 1123 l~~~g~~~~~~ama~tvg~p~ai~~~~~l~~~~~~~~~~~ 1162 (1201)
|+.||++||+||||||||+|+|||++|+|+|+|+.+|..-
T Consensus 380 l~~yg~~ng~samaktVg~p~ai~~~~~l~~~I~akgl~~ 419 (445)
T KOG0172|consen 380 LVLYGRENGESAMAKTVGSPTAIAAKMLLDGWIRAKGLLR 419 (445)
T ss_pred HhhcCCccchhHHHHhcCchHhhhhhhcccceeecccccc
Confidence 9999999999999999999999999999999999999753
No 3
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=100.00 E-value=3.4e-62 Score=576.46 Aligned_cols=346 Identities=20% Similarity=0.298 Sum_probs=286.1
Q ss_pred EEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC--ccCCcEEEEecCCCc---
Q psy12817 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED--ISEASIIFGVKQVPV--- 76 (1201)
Q Consensus 4 ~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed--ls~adiIlgVKepp~--- 76 (1201)
+|||+||+ ++|||||||||++|++|+++||+|+||+|+| ++|+|++|++|||+|+++ +++||+|+|||+|++
T Consensus 1 ~IGvpkE~-~~~E~RVAltP~~v~~L~k~G~~V~VE~gAG~~a~fsD~~Y~~aGA~I~~~~~~~~adiIlkV~~P~~~e~ 79 (511)
T TIGR00561 1 KIGVPRES-LDNECRVAATPKTVQQLLKLGFDVLVETGAGAKASFADRAFESAGAGIVDGTLFWQSDIILKVNAPSDAEI 79 (511)
T ss_pred CEEEecCC-CCCCeeeccCHHHHHHHHhCCCEEEEECCCCcCCCcCHHHHHHcCCEEecccchhcCCEEEEeCCCCHHHH
Confidence 48999996 7899999999999999999999999999996 999999999999999864 567999999999998
Q ss_pred cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccc-cCCCceeeccchhhhHHHHHHHHHHHHHHHhccCC
Q psy12817 77 DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVD-DEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHH 155 (1201)
Q Consensus 77 ~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d-~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~ 155 (1201)
+.|++|+|+++|+|+ + .|+++++++++||+|+|+||.|+| ++.+++++|++||++|||+++++ |+++|.+.+
T Consensus 80 ~~l~~g~tli~~l~p--~--~n~~ll~~l~~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~--Aa~~lgr~~- 152 (511)
T TIGR00561 80 AELPAGKALVSFIWP--A--QNPELMEKLAAKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIE--AAHEFGRFF- 152 (511)
T ss_pred HhcCCCCEEEEEcCc--c--CCHHHHHHHHHcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHH--HHHHhhhhc-
Confidence 789999999999997 4 499999999999999999999998 45788999999999999999998 577776643
Q ss_pred CCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCC
Q psy12817 156 TPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGS 235 (1201)
Q Consensus 156 tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga 235 (1201)
.|+.+.+|+ ++|.+|+|+|+|++|+.|+.+++.||+
T Consensus 153 ------------------------~g~~taag~----vp~akVlViGaG~iGl~Aa~~ak~lGA---------------- 188 (511)
T TIGR00561 153 ------------------------TGQITAAGK----VPPAKVLVIGAGVAGLAAIGAANSLGA---------------- 188 (511)
T ss_pred ------------------------CCceecCCC----CCCCEEEEECCCHHHHHHHHHHHHCCC----------------
Confidence 233334443 668999999999999999999999994
Q ss_pred ccEEEecchhHHhhHHHhcCCccccccccc-------Ccccccchhh-------hhcCCcCcEEEEceecCC-CCCcccC
Q psy12817 236 NTKIYACEVRRRNYLERIKGGGYDYQEYNE-------NPSLYRSLFA-------SKIAPYASIIINGIYWAV-GSPKLLT 300 (1201)
Q Consensus 236 ~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~-------~pe~y~s~f~-------~~i~p~~DvlIn~~~w~~-~~PrLIT 300 (1201)
.+.+++.+..+.++.++ .|..|-..+..+ +...++..|. .+.++.+||+|||+.|++ ++|+|+|
T Consensus 189 ~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit 267 (511)
T TIGR00561 189 IVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLIT 267 (511)
T ss_pred EEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeeh
Confidence 45666666666665555 554442222211 0112223332 345678999999999996 7999999
Q ss_pred HHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEee
Q psy12817 301 LPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSI 380 (1201)
Q Consensus 301 ~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~V 380 (1201)
++|++. |||| ++|||||||+|||||++ ++| |. | ...+||+|||+
T Consensus 268 ~emv~~-MKpG------------------svIVDlA~d~GGn~E~t-~p~----~~--~----------~~~~GV~~~gv 311 (511)
T TIGR00561 268 EEMVDS-MKAG------------------SVIVDLAAEQGGNCEYT-KPG----EV--Y----------TTENQVKVIGY 311 (511)
T ss_pred HHHHhh-CCCC------------------CEEEEeeeCCCCCEEEe-cCc----eE--E----------EecCCEEEEee
Confidence 999999 9999 99999999999999994 544 23 2 22478999999
Q ss_pred CCcCCCchHHHHHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCCC
Q psy12817 381 DNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKF 439 (1201)
Q Consensus 381 dNLPs~LP~eAS~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~~ 439 (1201)
+|||+++|++||++||+|++|||..|.+++. ..+..|..|+++|++++++||++|++.
T Consensus 312 ~nlPs~~p~~AS~l~s~nl~~~l~~l~~~~~-~~~~~d~~d~vlr~~~v~~~G~it~~~ 369 (511)
T TIGR00561 312 TDLPSRLPTQSSQLYGTNLVNLLKLLCKEKD-GNIKVDFEDVVIRGVTVSREGEITWPP 369 (511)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHhCcc-cccccCcCChHHhcCeEEECCEEeCCC
Confidence 9999999999999999999999999985431 234444568999999999999999976
No 4
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=100.00 E-value=1e-60 Score=550.63 Aligned_cols=344 Identities=23% Similarity=0.344 Sum_probs=293.5
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccCc---cCCcEEEEecCCCc-
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQEDI---SEASIIFGVKQVPV- 76 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~edl---s~adiIlgVKepp~- 76 (1201)
|+|||+||+ +++||||||||++|++|++.|++|+||+|+| ++|+|++|++|||+|+++. ++||+|++||+|..
T Consensus 1 m~igi~~E~-~~~E~Rval~P~~v~~l~~~g~~v~vE~gaG~~~~~~D~~Y~~aGa~i~~~~~~~~~~dii~~Vk~p~~~ 79 (370)
T TIGR00518 1 MRIGVPKEI-KNNEFRVALTPAGVAELTSRGHEVLVEAGAGEGSGFTDAAYKAAGAELVATAKQVWDAELVLKVKEPLPE 79 (370)
T ss_pred CEEEEEccC-CCCCceecCCHHHHHHHHhCCCEEEEECCCCcCCCCChHHHHHCCCEEecCHHHHhcCCEEEEeCCCCHH
Confidence 689999997 6789999999999999999999999999995 9999999999999998653 46999999999977
Q ss_pred --cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccC
Q psy12817 77 --DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGH 154 (1201)
Q Consensus 77 --~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~ 154 (1201)
+.+.+++++++|.|+ ..|++++++++++++|+|+||.|++.+|+ +++|++||++|||.++++ |+.+|.+..
T Consensus 80 ~~~~~~~g~~l~~~~~~----a~~~~~~~~l~~~~~t~i~~e~i~~~~~~-~~~l~~~~~iaG~~av~~--aa~~~~~~~ 152 (370)
T TIGR00518 80 EYGYLRHGQILFTYLHL----AAERALTDALLDSGTTAIAYETVQTADGA-LPLLAPMSEVAGRLAAQV--GAYHLEKTQ 152 (370)
T ss_pred HHhhcCCCcEEEEEecc----CCCHHHHHHHHHcCCeEEEeeeeeccCCC-CccccchhHHHHHHHHHH--HHHHhHhhc
Confidence 478899999999998 46899999999999999999999986554 678999999999999996 566665532
Q ss_pred CCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcC
Q psy12817 155 HTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHG 234 (1201)
Q Consensus 155 ~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~g 234 (1201)
.|++++++++++ ++|.+|+|+|+|++|++|+++|+++|
T Consensus 153 -------------------------~g~~~~~~~~~~-l~~~~VlViGaG~vG~~aa~~a~~lG---------------- 190 (370)
T TIGR00518 153 -------------------------GGRGVLLGGVPG-VEPGDVTIIGGGVVGTNAAKMANGLG---------------- 190 (370)
T ss_pred -------------------------CCcceeecCCCC-CCCceEEEEcCCHHHHHHHHHHHHCC----------------
Confidence 567777777765 88999999999999999999999999
Q ss_pred CccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCC-CCCcccCHHHHhcccCCCCC
Q psy12817 235 SNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAV-GSPKLLTLPDAKNLLRPNHM 313 (1201)
Q Consensus 235 a~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~-~~PrLIT~e~v~~lmkpg~~ 313 (1201)
+.+.+++.+..+.+.+....+..+.. .+.+++. ..+.++.+|+||||+.|+. ++|.|||+++++. |||+
T Consensus 191 a~V~v~d~~~~~~~~l~~~~g~~v~~--~~~~~~~-----l~~~l~~aDvVI~a~~~~g~~~p~lit~~~l~~-mk~g-- 260 (370)
T TIGR00518 191 ATVTILDINIDRLRQLDAEFGGRIHT--RYSNAYE-----IEDAVKRADLLIGAVLIPGAKAPKLVSNSLVAQ-MKPG-- 260 (370)
T ss_pred CeEEEEECCHHHHHHHHHhcCceeEe--ccCCHHH-----HHHHHccCCEEEEccccCCCCCCcCcCHHHHhc-CCCC--
Confidence 45677877766666665544442111 1122221 2356778999999999974 7899999999999 9999
Q ss_pred CCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCchHHHHH
Q psy12817 314 PWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEATD 393 (1201)
Q Consensus 314 ~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP~eAS~ 393 (1201)
++|+|++||+|||||+ +++||+|+|+ +..+||++||+||||+.+|++||+
T Consensus 261 ----------------~vIvDva~d~GG~~e~-~~~t~~d~p~-------------~~~~Gv~~~~v~nlP~~~p~~aS~ 310 (370)
T TIGR00518 261 ----------------AVIVDVAIDQGGCVET-SRPTTHDQPT-------------YAVHDVVHYCVANMPGAVPKTSTY 310 (370)
T ss_pred ----------------CEEEEEecCCCCCccC-CcCCCCCCCE-------------EEECCeEEEEeCCcccccHHHHHH
Confidence 8999999999999998 6899999999 455799999999999999999999
Q ss_pred HHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCCC
Q psy12817 394 FFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKF 439 (1201)
Q Consensus 394 ~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~~ 439 (1201)
+||++|+|||..+++++.... +..|++|++++++++|++|++.
T Consensus 311 ~~~~~l~~~l~~~~~~g~~~~---~~~d~~~~~~~~~~~G~~~~~~ 353 (370)
T TIGR00518 311 ALTNATMPYVLELANHGWRAA---CRSNPALAKGLNTHEGALLSEA 353 (370)
T ss_pred HHHHHHHHHHHHHHhcccccc---cccChHHhcCeEEeCCEEcCHH
Confidence 999999999999997664332 3458999999999999999873
No 5
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-61 Score=526.37 Aligned_cols=342 Identities=26% Similarity=0.406 Sum_probs=310.1
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC---ccC-CcEEEEecCCCc
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED---ISE-ASIIFGVKQVPV 76 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed---ls~-adiIlgVKepp~ 76 (1201)
|.||++||. +++|+||+|||..|+.|+++||+|+||.++| ++|+|++|+++||+|+.+ .|. +|+|++||||.+
T Consensus 1 M~IGvpkEi-k~~E~RValtP~~V~~l~~~GheVlVe~gAG~gsg~~D~~Y~~aGA~Iv~ta~~vw~~~dmvvKvKEP~~ 79 (371)
T COG0686 1 MRIGVPKEI-KNNENRVALTPASVRELVNHGHEVLVETGAGAGSGFDDDDYEAAGAKIVATAAEVWAEADMVVKVKEPLP 79 (371)
T ss_pred Ccccccccc-cCCcceeccChHhHHHHHhCCcEEEEecCCcCCCCCChHHHHHcCCEEecCHHHhhcccceEEEecCCCh
Confidence 689999995 8999999999999999999999999999996 999999999999999954 554 999999999988
Q ss_pred ---cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhcc
Q psy12817 77 ---DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALG 153 (1201)
Q Consensus 77 ---~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g 153 (1201)
.+|++++++|.|.|. +..+++.+.|+++++|.|+||.+...+|.... +.+|+.+||..++. +|+.+|.+.
T Consensus 80 ~EY~ylregqiLftyLHL----A~~~~lt~~l~~~gvtaIayETV~~~~g~lPl-LaPMSeVAGrla~q--~Ga~~lek~ 152 (371)
T COG0686 80 SEYPYLREGQILFTYLHL----AASPELTEALLKSGVTAIAYETVQLPDGNLPL-LAPMSEVAGRLAAQ--AGAYYLEKT 152 (371)
T ss_pred hhhhhhcCCcEEEEEeee----cCChHHHHHHHHcCcceEEEEEEEcCCCCCcc-cchHHHHhhhHHHH--HHHHHHHhc
Confidence 569999999999998 67799999999999999999999998887666 89999999999998 589888876
Q ss_pred CCCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhc
Q psy12817 154 HHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEH 233 (1201)
Q Consensus 154 ~~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ 233 (1201)
+ .|+++.+||.|| +.|.+|+|+|.|+||..|..+|..||
T Consensus 153 ~-------------------------GG~GvllgGvpG-V~~~kv~iiGGGvvgtnaAkiA~glg--------------- 191 (371)
T COG0686 153 N-------------------------GGKGVLLGGVPG-VLPAKVVVLGGGVVGTNAAKIAIGLG--------------- 191 (371)
T ss_pred c-------------------------CCceeEecCCCC-CCCccEEEECCccccchHHHHHhccC---------------
Confidence 4 799999999999 99999999999999999999999998
Q ss_pred CCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhh-hhcCCcCcEEEEceecCC-CCCcccCHHHHhcccCCC
Q psy12817 234 GSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFA-SKIAPYASIIINGIYWAV-GSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 234 ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~-~~i~p~~DvlIn~~~w~~-~~PrLIT~e~v~~lmkpg 311 (1201)
++|++.+..+.|..++....++.... .|++..+ ++.++.+|+||+++.+++ ++|+|+|+||+++ ||||
T Consensus 192 -A~Vtild~n~~rl~~ldd~f~~rv~~--------~~st~~~iee~v~~aDlvIgaVLIpgakaPkLvt~e~vk~-MkpG 261 (371)
T COG0686 192 -ADVTILDLNIDRLRQLDDLFGGRVHT--------LYSTPSNIEEAVKKADLVIGAVLIPGAKAPKLVTREMVKQ-MKPG 261 (371)
T ss_pred -CeeEEEecCHHHHhhhhHhhCceeEE--------EEcCHHHHHHHhhhccEEEEEEEecCCCCceehhHHHHHh-cCCC
Confidence 78999999999999888766664332 3333333 566888999999999995 9999999999999 9999
Q ss_pred CCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCchHHH
Q psy12817 312 HMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEA 391 (1201)
Q Consensus 312 ~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP~eA 391 (1201)
+||+||+||+|||||++ ++||+|+|+ |+.+||.||||.|||+.+||++
T Consensus 262 ------------------sVivDVAiDqGGc~Et~-~~TTh~~Pt-------------Y~~~gvvhY~VaNmPgaVprTs 309 (371)
T COG0686 262 ------------------SVIVDVAIDQGGCFETS-HPTTHDDPT-------------YEVDGVVHYGVANMPGAVPRTS 309 (371)
T ss_pred ------------------cEEEEEEEcCCCceecc-ccccCCCCc-------------eeecCEEEEecCCCCccccchh
Confidence 99999999999999995 999999998 7778999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCC
Q psy12817 392 TDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPK 438 (1201)
Q Consensus 392 S~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~ 438 (1201)
|+.++|..+||+..+++++..+.+.. |+.|+.++.++||++|++
T Consensus 310 t~AL~nat~py~l~la~~G~~~a~~~---n~~l~~Gln~~~G~vt~~ 353 (371)
T COG0686 310 TQALTNATLPYILQLADKGLLKALKD---NPALAKGLNTYNGKVTNE 353 (371)
T ss_pred HHHhhhcchHHHHHHhcchHHHHhhc---CHHHhccchhhcceeccH
Confidence 99999999999999998885555543 899999999999999975
No 6
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=100.00 E-value=6.5e-56 Score=524.78 Aligned_cols=347 Identities=20% Similarity=0.300 Sum_probs=287.1
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC--ccCCcEEEEecCCCc--
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED--ISEASIIFGVKQVPV-- 76 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed--ls~adiIlgVKepp~-- 76 (1201)
|+|||+||+ ++|||||||||++|++|+++||+|+||+|+| ++|+|++|++|||+|+++ +++||+|+|||+|++
T Consensus 1 m~IGipkE~-~~~E~RValtP~~v~~L~~~G~~V~VE~gAG~~a~fsD~~Y~~aGA~I~~~~~v~~~diilkV~~P~~~e 79 (509)
T PRK09424 1 MRIGIPRER-LPGETRVAATPKTVEQLLKLGFEVVVESGAGQLASFDDAAYREAGAEIVDGAAVWQSDIILKVNAPSDDE 79 (509)
T ss_pred CeEEEecCC-CCCCeEeccCHHHHHHHHHCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCcccccCCEEEEeCCCCHHH
Confidence 689999996 7999999999999999999999999999996 999999999999999864 678999999999988
Q ss_pred -cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccc-cCCCceeeccchhhhHHHHHHHHHHHHHHHhccC
Q psy12817 77 -DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVD-DEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGH 154 (1201)
Q Consensus 77 -~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d-~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~ 154 (1201)
+.|++|+|+++|+|+ ..|+++++++++||+|+|+||.|+| .+.+++++|++||+||||+++++ +++++.+.+
T Consensus 80 ~~~l~~g~~li~~l~p----~~~~~l~~~l~~~~it~ia~e~vpr~sraq~~d~lssma~IAGy~Av~~--aa~~~~~~~ 153 (509)
T PRK09424 80 IALLREGATLVSFIWP----AQNPELLEKLAARGVTVLAMDAVPRISRAQSLDALSSMANIAGYRAVIE--AAHEFGRFF 153 (509)
T ss_pred HHhcCCCCEEEEEeCc----ccCHHHHHHHHHcCCEEEEeecccccccCCCcccccchhhhhHHHHHHH--HHHHhcccC
Confidence 679999999999999 6699999999999999999999998 56889999999999999999997 566666542
Q ss_pred CCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcC
Q psy12817 155 HTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHG 234 (1201)
Q Consensus 155 ~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~g 234 (1201)
.|..+++| .++|.+|+|+|+|++|++|+.+|+++|
T Consensus 154 -------------------------~g~~taaG----~~pg~kVlViGaG~iGL~Ai~~Ak~lG---------------- 188 (509)
T PRK09424 154 -------------------------TGQITAAG----KVPPAKVLVIGAGVAGLAAIGAAGSLG---------------- 188 (509)
T ss_pred -------------------------CCceeccC----CcCCCEEEEECCcHHHHHHHHHHHHCC----------------
Confidence 22233344 366899999999999999999999999
Q ss_pred CccEEEecchhHHhhHHHhcCCcccccccccC-------cccccchhh-------hhcCCcCcEEEEceecCC-CCCccc
Q psy12817 235 SNTKIYACEVRRRNYLERIKGGGYDYQEYNEN-------PSLYRSLFA-------SKIAPYASIIINGIYWAV-GSPKLL 299 (1201)
Q Consensus 235 a~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~-------pe~y~s~f~-------~~i~p~~DvlIn~~~w~~-~~PrLI 299 (1201)
+.|.++|.+..+.++.++ .|..|...+..+. -.+.+..+. .+.+..+|++|+|+.|++ ++|+++
T Consensus 189 A~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~li 267 (509)
T PRK09424 189 AIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLI 267 (509)
T ss_pred CEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchH
Confidence 456778888778777776 6766543222110 111222221 233467999999999996 799999
Q ss_pred CHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEe
Q psy12817 300 TLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCS 379 (1201)
Q Consensus 300 T~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~ 379 (1201)
|+++++. |||| ++|+|++||.|||||++ .+ .+|+ +..+||+++|
T Consensus 268 t~~~v~~-mkpG------------------gvIVdvg~~~GG~~e~t-~~---~~~v-------------~~~~gVti~G 311 (509)
T PRK09424 268 TAEMVAS-MKPG------------------SVIVDLAAENGGNCELT-VP---GEVV-------------VTDNGVTIIG 311 (509)
T ss_pred HHHHHHh-cCCC------------------CEEEEEccCCCCCcccc-cC---ccce-------------EeECCEEEEE
Confidence 9999999 9999 89999999999999983 32 2444 3337999999
Q ss_pred eCCcCCCchHHHHHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCCC
Q psy12817 380 IDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKF 439 (1201)
Q Consensus 380 VdNLPs~LP~eAS~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~~ 439 (1201)
++|+|+++|++||++|++++++++..+.... ...+..+..|+++++++++++|+++++.
T Consensus 312 v~n~P~~~p~~As~lla~~~i~l~~lIt~~~-~g~~~~~~~d~vi~~~~~~~~G~i~~~~ 370 (509)
T PRK09424 312 YTDLPSRLPTQSSQLYGTNLVNLLKLLCPEK-DGNIVVDFDDVVIRGVTVVRDGEITWPP 370 (509)
T ss_pred eCCCchhHHHHHHHHHHhCCccHHHHhccCc-cchhhhcccCHHHhcCeEEECCEEecCC
Confidence 9999999999999999999999988664221 1224445569999999999999999974
No 7
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=100.00 E-value=4.5e-50 Score=463.41 Aligned_cols=356 Identities=36% Similarity=0.591 Sum_probs=305.1
Q ss_pred EEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHH--cCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 568 VLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNE--FGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 568 VLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~--~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|+|||+|.||+.++++|+++... +|+|+||+.++++++++. ..+++++++|+.| .++|.++++++|+||||+|++
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND--PESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT--HHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC--HHHHHHHHhcCCEEEECCccc
Confidence 79999999999999999998877 899999999999999874 3579999999998 888999999999999999888
Q ss_pred ccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecCCCC
Q psy12817 645 LHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLP 724 (1201)
Q Consensus 645 ~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cGGLP 724 (1201)
++..++++|+++|+||||.+|..+.+.+++++|+++|+++++++|++||++|++++++++++....+++++|.+||||.|
T Consensus 79 ~~~~v~~~~i~~g~~yvD~~~~~~~~~~l~~~a~~~g~~~l~~~G~~PGl~~~~a~~~~~~~~~~~~~v~~~~~~~g~~~ 158 (386)
T PF03435_consen 79 FGEPVARACIEAGVHYVDTSYVTEEMLALDEEAKEAGVTALPGCGFDPGLSNLLARYAADELDAEGDEVESVDIYVGGLP 158 (386)
T ss_dssp GHHHHHHHHHHHT-EEEESS-HHHHHHHCHHHHHHTTSEEE-S-BTTTBHHHHHHHHHHHHHHHTTHEEEEEEEEEEEEE
T ss_pred hhHHHHHHHHHhCCCeeccchhHHHHHHHHHHHHhhCCEEEeCcccccchHHHHHHHHHHHhhhhcccceEEEEEEcccc
Confidence 99999999999999999999989999999999999999999999999999999999999999877789999999999999
Q ss_pred CCCCCCCccccccccChHHHHHHhccceeeeeCCeEEEecCCccccccccccccCCCceEEEeeCCCccchhhhcccccc
Q psy12817 725 APECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIAAE 804 (1201)
Q Consensus 725 aPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l~~~~~~idf~pg~~lE~ypNRDSl~Y~~~YgI~~~ 804 (1201)
+|+.++||++|+++||+++++.++.+++++++||+++++++++.......+..+.++..+++|++++++.++..|+++ +
T Consensus 159 ~p~~~~~~~~~~~~ws~~~~l~e~~~~~~~~~~G~~~~v~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 237 (386)
T PF03435_consen 159 APEAPDNPLGYKFTWSPEGVLEEYSPPARVYRDGKWVEVPPFSEEERVDFPYPIGPGGAYEAFHPEDSTLTRSFYGLP-E 237 (386)
T ss_dssp EGCG--TTTSEEBSS-HHHHHHHHCS-EEEEETTEEEEEETTTTCCCETEEE-SSTTECEEEEEECBGTTHHHHTT-T-T
T ss_pred CCCCCCCCcccceeeeehhhHHhhcccceEeeCCEEEEecCccccceeeeeeEecccceeeeecCcCCceeeEeecCC-C
Confidence 999999999999999999999999999999999999999998443211112233456689999999999999999997 6
Q ss_pred cccccccceeccCHHHHHHHHHHcCCCCCCccccCCCCCCccCHHHHHHHHcCCCCCchhHHHHHHHHHhhhcCcchhHH
Q psy12817 805 AHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGLSTSDIFYENLKNIVADKVGNTGLEAL 884 (1201)
Q Consensus 805 ~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep~~~l~~~~~~it~r~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~l 884 (1201)
..++.++|+||+||+++|+.|.++||++++++..
T Consensus 238 ~~~~~~~t~r~~~~~~~~~~l~~lgl~~~~~~~~---------------------------------------------- 271 (386)
T PF03435_consen 238 VRNVIRKTLRYPGFLNVMKLLKDLGLLSEEPVYV---------------------------------------------- 271 (386)
T ss_dssp TSEEEEEEEEETTHHHHHHHHHHTTTTSHCBEGG----------------------------------------------
T ss_pred cccEEEEEeeEhhHHHHHHHHHhhcccCCccccc----------------------------------------------
Confidence 6699999999999999999999999999876331
Q ss_pred HhhccccchhhhcccCCCcchhhhHHHhhhhhhhhcccccccccCcceeecccccccccchhhhccchhhhhhcCCCCCc
Q psy12817 885 EALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPF 964 (1201)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 964 (1201)
T Consensus 272 -------------------------------------------------------------------------------- 271 (386)
T PF03435_consen 272 -------------------------------------------------------------------------------- 271 (386)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCcccchhhhHHHHhhhcccccccCCCCCCCCCceeeecCCCccccchhhhhhcCchhHHHHhhccCCCchhhhhh
Q psy12817 965 MHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEELVCTLLGLSTSDIFYEN 1044 (1201)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1201)
T Consensus 272 -------------------------------------------------------------------------------- 271 (386)
T PF03435_consen 272 -------------------------------------------------------------------------------- 271 (386)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhcccchhhHHHHHHHhCCCCCccccCCCCCHHHHHHHHHHhhcCCCCCCccEEEEEeeEEEEeCCCceEEEEEeEE
Q psy12817 1045 LKNIVADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWPNRSRERKSISLV 1124 (1201)
Q Consensus 1045 l~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~h~~~~~~~~~~~~~~~~~l~ 1124 (1201)
. .+|.|.|++.|++++.+.++++|+++|+|++.-.+++|++.+.+++++
T Consensus 272 ---------~----------------------~~p~~~l~~~l~~~~~~~~~~~d~~~~~v~v~G~~~~G~~~~~~~~~~ 320 (386)
T PF03435_consen 272 ---------Y----------------------VSPRDLLAALLEKRLRPGPGERDMVVLRVEVEGWDKDGKPVRRTSYLV 320 (386)
T ss_dssp ---------G----------------------SCHHHHHHHHHHHHSCTTTT-SEEEEEEEEEEEEETTCEEEEEEEEEE
T ss_pred ---------h----------------------hhHHHHHHhhChhhcCCcccccCceeEEEEEEEEeCCCCEEEEEEeec
Confidence 0 457888888999999999999999999999998889999999999998
Q ss_pred -EEcCC--CCcchhhhccchhHHHHHHHHHcCccceeecccc
Q psy12817 1125 -VYGQP--NGTTAMAKTVGLPAAIAAKMILEGEFFVTTSTSS 1163 (1201)
Q Consensus 1125 -~~g~~--~~~~ama~tvg~p~ai~~~~~l~~~~~~~~~~~~ 1163 (1201)
.++++ .+.|+||+|+|+|+||+|+|+++|++..+|+...
T Consensus 321 ~~~~~~~~~~~~~m~~~tg~~~ai~a~ll~~g~~~~~GV~~P 362 (386)
T PF03435_consen 321 YPSGDPIETGGSAMARTTGIPAAIAAQLLADGEITRPGVVPP 362 (386)
T ss_dssp EEEEECCCSSCHHHHHHHHHHHHHHHHHHHTTSSH-SEEE-S
T ss_pred eecccccCCCCCccHHHhhHHHHHHHHHHHCCCcCCCeEECH
Confidence 66665 6789999999999999999999999999998753
No 8
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-49 Score=450.50 Aligned_cols=278 Identities=29% Similarity=0.426 Sum_probs=246.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|+||+|||||.||+.++..|+++++.+|+++||+.+++++++... +++++.++|+.| .+++.++|++.|+||||+|+
T Consensus 1 m~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 1 MMKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CCcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hHHHHHHHhcCCEEEEeCCc
Confidence 789999999999999999999998889999999999999987653 578999999998 88999999999999999999
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecCCC
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGL 723 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cGGL 723 (1201)
+++..++++|+++|+||+|+||..+..+++++.|+++|++++++||||||++|+++.+.++++++ +++++.+|||++
T Consensus 79 ~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a~~~~~~---~i~si~iy~g~~ 155 (389)
T COG1748 79 FVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGITNVLAAYAAKELFD---EIESIDIYVGGL 155 (389)
T ss_pred hhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcchHHHHHHHHHHHhhc---cccEEEEEEecC
Confidence 99999999999999999999987666799999999999999999999999999999999999853 789999999999
Q ss_pred CCCCCCCCccccccccChHHHHHHhccceeeeeCCeEEEecCCcccccccccccc-CCCceEEEeeCCCccchhhhcccc
Q psy12817 724 PAPECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDF-LPGFSFEGFANRDSLRYAQLYNIA 802 (1201)
Q Consensus 724 PaPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l~~~~~~idf-~pg~~lE~ypNRDSl~Y~~~YgI~ 802 (1201)
|+ +.+||++|+++|||+++|+++++|+++|+||+|++|++++.. +.++| .+|.....+.++|++.+... .|+
T Consensus 156 g~--~~~~~l~ya~tws~e~~l~e~~~p~~~~~~Gk~~~v~~~~~~----~~~~~~~~G~~~~y~~~~~el~sL~~-~i~ 228 (389)
T COG1748 156 GE--HGDNPLGYATTWSPEINLREYTRPARYWENGKWVEVDPLEER----EVFEFPVIGYGDVYAFYHDELRSLVK-TIP 228 (389)
T ss_pred CC--CCCCCccceeeecHHHhHHHhcCceEEEeCCEEEEecCcccc----cccccCCCCceeEEecCCccHHHHHH-hCc
Confidence 85 559999999999999999999999999999999999998433 22332 35665455556777765333 455
Q ss_pred cccccccccceeccCHHHHHHHHHHcCCCCCCccccCCCCCCccCHHHHHHHHcCC
Q psy12817 803 AEAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGL 858 (1201)
Q Consensus 803 ~~~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep~~~l~~~~~~it~r~~l~~lL~~ 858 (1201)
+.+++++++|+||+||.++|++|++|||++++|++. . ++++|+||+.++|+.
T Consensus 229 ~~~~~~~~~t~r~~g~~~~i~~L~~lGll~~~~v~~---~-~~i~p~eflk~vl~~ 280 (389)
T COG1748 229 GVVRTRFEMTFRYPGHLEVIKALRDLGLLSREPVKV---Q-QEIVPLEFLKAVLPD 280 (389)
T ss_pred ccceeeEEeecCcccHHHHHHHHHHcCCCccccccc---c-cccchHHHHHHhccc
Confidence 467999999999999999999999999999999874 3 789999999999874
No 9
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=100.00 E-value=1.4e-50 Score=441.07 Aligned_cols=344 Identities=21% Similarity=0.283 Sum_probs=280.8
Q ss_pred EEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEc--cCccCCcEEEEecCCCc---
Q psy12817 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQ--EDISEASIIFGVKQVPV--- 76 (1201)
Q Consensus 4 ~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~--edls~adiIlgVKepp~--- 76 (1201)
+|||+||. ..+|+||++||+.|++|+++||+|.||+++| +.|+|++|+++||+|. +..+++|+|++|.+|..
T Consensus 1 ~igvp~E~-~~~E~Rva~tP~tv~~l~~~G~~v~ve~gaG~~a~~~D~~y~aaGa~i~~~~~~~~adiilKv~~p~a~e~ 79 (356)
T COG3288 1 RIGVPKES-LANETRVAATPETVKKLVKLGFDVVVESGAGLRASFPDAAYVAAGATIGAADAVWQADIILKVRAPSAAEI 79 (356)
T ss_pred Cccccccc-cCCCceeecCHHHHHHHHhCCcEEEEecCCccccCCChHHHHHhccEeehhhhhccCCeeeeecCCchhhh
Confidence 48999996 8999999999999999999999999999997 9999999999999999 33468999999999987
Q ss_pred cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEecccccc-CCCceeeccchhhhHHHHHHHHHHHHHHHhccCC
Q psy12817 77 DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD-EGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHH 155 (1201)
Q Consensus 77 ~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~-~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~ 155 (1201)
..++++.++++|..+ ..|.+++.+|..++++.|.+|.+|+. +-+.++++++++|++||++++.+ +.. .+.+
T Consensus 80 ~~~~~ga~lv~~l~p----~~~~~~v~~La~~~La~fag~~Vpr~vraqlhdpLsS~aNaigy~aVi~A--a~a--~~rf 151 (356)
T COG3288 80 ALLKEGATLVSFLNP----YQNDELVFALAIFVLAAFAGEAVPRIVRAQLHDPLSSQANAIGYIAVIGA--ALA--YGRF 151 (356)
T ss_pred hhcccchhhhhhcCc----ccChHHHHHHHHHHHHHHHHhhhccccchhhccHHHhhhhhhhHHHHHHH--HHH--hhhc
Confidence 346789999999998 67999999999999999999999985 34669999999999999999975 332 3334
Q ss_pred CCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCC
Q psy12817 156 TPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGS 235 (1201)
Q Consensus 156 tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga 235 (1201)
+|||.+ .+ ++++|++++++|.|++|++|+.++.+||+. |+..|+|...+.
T Consensus 152 fpm~~T------------------------Aa---gtv~pA~vlv~G~Gvagl~aiata~~lG~i-Vt~rdlrm~~Ke-- 201 (356)
T COG3288 152 FPMQIT------------------------AA---GTVSPAKVLVIGAGVAGLAAIATAVRLGAI-VTARDLRMFKKE-- 201 (356)
T ss_pred ccchhh------------------------hc---ccccchhhhhhhHHHHHHHHHHHHhhcceE-EehhhhhhHHhh--
Confidence 566532 23 378899999999999999999999999976 888888766641
Q ss_pred ccEEEecchhHHhhHHHhcCCcccccccccCcccccch---hhhhcCCcCcEEEEceecCC-CCCcccCHHHHhcccCCC
Q psy12817 236 NTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSL---FASKIAPYASIIINGIYWAV-GSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 236 ~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~---f~~~i~p~~DvlIn~~~w~~-~~PrLIT~e~v~~lmkpg 311 (1201)
+++..+.+....+..| .+++|.+ +-+++|... +..+.++..||||+|+++|+ ++|+|+|++|+++ ||||
T Consensus 202 qv~s~Ga~f~~~~~ee--~~gGYAk----~ms~~~~~~q~~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~s-MkpG 274 (356)
T COG3288 202 QVESLGAKFLAVEDEE--SAGGYAK----EMSEEFIAKQAELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVAS-MKPG 274 (356)
T ss_pred hhhhcccccccccccc--cCCCccc----cCCHHHHHHHHHHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHh-cCCC
Confidence 1111111111112111 3345665 223444422 22568889999999999995 9999999999999 9999
Q ss_pred CCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCchHHH
Q psy12817 312 HMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEA 391 (1201)
Q Consensus 312 ~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP~eA 391 (1201)
|||+|+++.+|||||.+ + .+ -+ ++.+||+++|..|||+.+|.+|
T Consensus 275 ------------------SViVDlAa~~GGNce~t-~---pg-~~-------------v~~~gV~iig~~nlp~r~a~~a 318 (356)
T COG3288 275 ------------------SVIVDLAAETGGNCELT-E---PG-KV-------------VTKNGVKIIGYTNLPGRLAAQA 318 (356)
T ss_pred ------------------cEEEEehhhcCCCcccc-c---CC-eE-------------EEeCCeEEEeecCcchhhhhhH
Confidence 99999999999999994 2 22 12 6779999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCe
Q psy12817 392 TDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGE 434 (1201)
Q Consensus 392 S~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~ 434 (1201)
|++|+.||++||..+.+++. .. ..|++||.+++|++|+
T Consensus 319 S~LYa~Nl~~~l~ll~~~~~-~~----~~D~vv~~~~vt~~g~ 356 (356)
T COG3288 319 SQLYATNLVNLLKLLCKKKD-AI----FDDEVVRAVTVTRDGE 356 (356)
T ss_pred HHHHHHHHHHHHHHHhccCC-Cc----chHHHHhhheeecCCC
Confidence 99999999999999887665 22 3489999999999995
No 10
>PF05222 AlaDh_PNT_N: Alanine dehydrogenase/PNT, N-terminal domain; InterPro: IPR007886 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins, represented in this entry, and to a central glycine-rich region which is part of the NAD(H)-binding site.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1X15_A 2BRU_A 1X14_B 1X13_A 2EEZ_F 2VOE_F 2VHV_B 2VHY_A 2VHX_A 2VHW_A ....
Probab=99.97 E-value=3.5e-31 Score=266.52 Aligned_cols=126 Identities=33% Similarity=0.452 Sum_probs=104.8
Q ss_pred EEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC---c-cCCcEEEEecCCCc---
Q psy12817 6 AIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED---I-SEASIIFGVKQVPV--- 76 (1201)
Q Consensus 6 GI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed---l-s~adiIlgVKepp~--- 76 (1201)
||+||. ++|||||||||++|++|++.|++|+||+|+| ++|+|++|++|||+|+++ + ++|||||+||+|++
T Consensus 1 Gi~kE~-~~~E~RVal~P~~v~~L~~~G~~V~VE~gaG~~a~fsD~~Y~~aGA~I~~~~~ev~~~adiIl~v~~p~~~e~ 79 (136)
T PF05222_consen 1 GIPKES-KPGERRVALTPEDVKKLVKLGHEVLVESGAGEGAGFSDEEYEEAGAEIVSRAEEVYSDADIILKVKPPSEEEL 79 (136)
T ss_dssp EE-B---STT---BSS-HHHHHHHHHTTSEEEEETTTTGGGTB-HHHHHHTTEEEESSHHHHHTTSSEEEESS---GGGG
T ss_pred CccCcC-CCCCcEecccHHHHHHHHhCCCEEEEECCCCCcCcccHHHHhhCCcEEecCchhhcccCCEEEEECCCCHHHH
Confidence 899995 9999999999999999999999999999996 999999999999999953 3 57999999999965
Q ss_pred cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEecccccc-CCCceeeccchhhhH
Q psy12817 77 DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD-EGNRVVAFGKYAGVA 136 (1201)
Q Consensus 77 ~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~-~g~Rlvafg~~AgiA 136 (1201)
+.|++|++|++|+|++ .|+++++.++++|+|+||||.|+|. ++|+|++||+||+||
T Consensus 80 ~~l~~g~~li~~~~~~----~~~~~~~~l~~~~it~~a~E~ipr~s~aq~md~lss~a~iA 136 (136)
T PF05222_consen 80 ALLKPGQTLIGFLHPA----QNKELLEALAKKGITAFALELIPRISRAQSMDVLSSQANIA 136 (136)
T ss_dssp GGS-TTCEEEEE--GG----GHHHHHHHHHHCTEEEEEGGGSBSSGGGGGGTHHHHHHHHH
T ss_pred hhcCCCcEEEEeeccc----cCHHHHHHHHHCCCEEEEhhhCcCCcCCcCcccchhhhccC
Confidence 5689999999999994 4899999999999999999999994 899999999999997
No 11
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=99.96 E-value=4e-31 Score=273.98 Aligned_cols=164 Identities=37% Similarity=0.506 Sum_probs=124.9
Q ss_pred hhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcc
Q psy12817 179 DAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGY 258 (1201)
Q Consensus 179 ~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f 258 (1201)
..|..+.+.|.++.++|++|+|+|+|+||+||+++|++||++++.+++.....+.......+.+.+...++.+++ .|
T Consensus 4 ~~g~~~~~~~~~~~~~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~ 80 (168)
T PF01262_consen 4 YNGGKGMLLGGPGGVPPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERK---DF 80 (168)
T ss_dssp GSSSSSHEECTTTEE-T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB----C
T ss_pred cCCccceeccCCCCCCCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEccccccccc---cc
Confidence 356666666777889999999999999999999999999999888877655443211222233344444444433 39
Q ss_pred cccccccCcccccchhhhhcCCcCcEEE-EceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeecc
Q psy12817 259 DYQEYNENPSLYRSLFASKIAPYASIII-NGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISA 337 (1201)
Q Consensus 259 ~~~ey~~~pe~y~s~f~~~i~p~~DvlI-n~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~ 337 (1201)
++.+|+++|+.|.+.|++.+. .+|+|| |+++|..++|+|||++|+++ |||| +||+||||
T Consensus 81 ~~~~~~~~~~~~~~~f~~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~-m~~g------------------svIvDis~ 140 (168)
T PF01262_consen 81 DKADYYEHPESYESNFAEFIA-PADIVIGNGLYWGKRAPRLVTEEMVKS-MKPG------------------SVIVDISC 140 (168)
T ss_dssp CHHHCHHHCCHHHHHHHHHHH-H-SEEEEHHHBTTSS---SBEHHHHHT-SSTT------------------EEEEETTG
T ss_pred chhhhhHHHHHhHHHHHHHHh-hCcEEeeecccCCCCCCEEEEhHHhhc-cCCC------------------ceEEEEEe
Confidence 999999999999999997655 468777 68888899999999999999 9999 99999999
Q ss_pred CCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEe
Q psy12817 338 DPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCS 379 (1201)
Q Consensus 338 D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~ 379 (1201)
|+|||||| +++||+++|+ |+++||+|||
T Consensus 141 D~gG~iE~-t~~~T~~~p~-------------~~~~GV~~~~ 168 (168)
T PF01262_consen 141 DQGGSIET-TRPTTHADPT-------------YEKNGVTHYG 168 (168)
T ss_dssp GGT-SBTT-EETTBTTCEE-------------EEETTEEEEE
T ss_pred cCCCCcCc-cccCCCCCCe-------------EEeCCEEEEC
Confidence 99999999 5899999999 6668999997
No 12
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=99.84 E-value=2.1e-19 Score=202.58 Aligned_cols=249 Identities=18% Similarity=0.225 Sum_probs=183.8
Q ss_pred HHHHHHHhCCCEEEEeCCCCCCCCchHHhhcCcEEccC----ccCCcEEEEecCCC------------------c---cC
Q psy12817 24 SNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQED----ISEASIIFGVKQVP------------------V---DL 78 (1201)
Q Consensus 24 ~~V~~L~~~G~~VlVE~sagr~f~D~eY~~AGA~I~ed----ls~adiIlgVKepp------------------~---~~ 78 (1201)
..+++|.++|++|.| .+|+|++|..+||++.++ +.+||+|+.+-+++ . +.
T Consensus 16 ~~~~~l~~~G~~v~~-----~g~~~~~~~~~g~~~~~~~~~~~~~ad~ii~~~p~~~~~~~i~~~~~~~~~~~~~~~l~~ 90 (296)
T PRK08306 16 ELIRKLVELGAKVSL-----VGFDQLDHGFTGATKSSSLEEALSDVDVIILPVPGTNDEGNVDTVFSNEKLVLTEELLEL 90 (296)
T ss_pred HHHHHHHHCCCEEEE-----EeccccccccCCceeeccHHHHhccCCEEEECCccccCCceeeccccccCCcchHHHHHh
Confidence 578999999999999 889999999999999843 45799999995542 2 45
Q ss_pred CCCCc-EEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccCCCC
Q psy12817 79 LLPNK-TYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTP 157 (1201)
Q Consensus 79 L~~~k-t~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~tP 157 (1201)
|++++ .++++.++ .+-+.+.++||+++++... +.++...+.+-..| ++.++ .+.
T Consensus 91 l~~~~~v~~G~~~~--------~~~~~~~~~gi~~~~~~~~-----~~~~~~ns~~~aeg--av~~a--~~~-------- 145 (296)
T PRK08306 91 TPEHCTIFSGIANP--------YLKELAKETNRKLVELFER-----DDVAILNSIPTAEG--AIMMA--IEH-------- 145 (296)
T ss_pred cCCCCEEEEecCCH--------HHHHHHHHCCCeEEEEecc-----chhhhhccHhHHHH--HHHHH--HHh--------
Confidence 77887 44555553 2335567999999876655 34454555555555 22221 110
Q ss_pred ccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCcc
Q psy12817 158 FMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNT 237 (1201)
Q Consensus 158 fl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~v 237 (1201)
.+.++.+.+++|+|.|++|+.++..++++| +.+
T Consensus 146 -------------------------------~~~~l~g~kvlViG~G~iG~~~a~~L~~~G----------------a~V 178 (296)
T PRK08306 146 -------------------------------TPITIHGSNVLVLGFGRTGMTLARTLKALG----------------ANV 178 (296)
T ss_pred -------------------------------CCCCCCCCEEEEECCcHHHHHHHHHHHHCC----------------CEE
Confidence 012456789999999999999999999999 557
Q ss_pred EEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCC
Q psy12817 238 KIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLP 317 (1201)
Q Consensus 238 kvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~ 317 (1201)
.+++.+..+....+. .|..+. .+ +. ..+.++.+|+||||+- +.++++++++. |+|+
T Consensus 179 ~v~~r~~~~~~~~~~-~G~~~~---------~~-~~-l~~~l~~aDiVI~t~p-----~~~i~~~~l~~-~~~g------ 234 (296)
T PRK08306 179 TVGARKSAHLARITE-MGLSPF---------HL-SE-LAEEVGKIDIIFNTIP-----ALVLTKEVLSK-MPPE------ 234 (296)
T ss_pred EEEECCHHHHHHHHH-cCCeee---------cH-HH-HHHHhCCCCEEEECCC-----hhhhhHHHHHc-CCCC------
Confidence 788777655544443 443211 11 11 1345778999999962 36789999988 8999
Q ss_pred CCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCc-hHHHHHHHH
Q psy12817 318 TSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQL-PMEATDFFG 396 (1201)
Q Consensus 318 ~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~L-P~eAS~~fs 396 (1201)
++|+|+++++|| ++|. . .+..||.+++++|||+.+ |.+||++|+
T Consensus 235 ------------~vIIDla~~pgg-td~~---------~-------------a~~~Gv~~~~~~~lpg~vap~ta~~~~~ 279 (296)
T PRK08306 235 ------------ALIIDLASKPGG-TDFE---------Y-------------AEKRGIKALLAPGLPGKVAPKTAGQILA 279 (296)
T ss_pred ------------cEEEEEccCCCC-cCee---------e-------------hhhCCeEEEEECCCCccCCHHHHHHHHH
Confidence 899999999998 6651 1 345799999999999999 999999999
Q ss_pred HHhHHHHHHHHh
Q psy12817 397 NLVFPYALDILQ 408 (1201)
Q Consensus 397 ~~L~pyl~~l~~ 408 (1201)
+++.+||..+..
T Consensus 280 ~~i~~~l~~~~~ 291 (296)
T PRK08306 280 NVLSQLLAEDLI 291 (296)
T ss_pred HHHHHHHHHHHh
Confidence 999999987764
No 13
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=99.71 E-value=2.8e-18 Score=217.39 Aligned_cols=111 Identities=53% Similarity=0.857 Sum_probs=109.0
Q ss_pred hhhcccccccccCcceeecccccccccchhhhccchhhhhhcCCCCCccccCCCcccchhhhHHHHhhhcccccccCCCC
Q psy12817 917 RLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMP 996 (1201)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1201)
++++||.+.+++|.||++||+|||.+||.|+||++|.|.|..||+||||+|+++|+|+|..++.+|+++.|.+|.++++|
T Consensus 119 t~~ayE~i~~~~G~rl~~fg~~AG~~g~~~~l~~~g~~~L~~~~~~pf~~l~~~~~y~~~~~~~~a~~~~G~~i~~~g~p 198 (1042)
T PLN02819 119 SLFDYELIVGDHGKRLVAFGKYAGRAGMIDFFRGLGQRLLSLGYSTPFLSLGSSYMYSSLAAAKAAVISVGEEIASSGLP 198 (1042)
T ss_pred eEEEEeceECCCCCEEeechHHHHHHHHHHHHHHHHHHHHhccCCCcccccccccccCCHHHHHHHHHhccceeeccCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeeecCCCccccchhhhhhcCchhH
Q psy12817 997 KSIGPLTIVFTGSGNVSQGAQEIFQELPYEE 1027 (1201)
Q Consensus 997 ~~~~~~~~~~~~~g~~~~~~~e~~~~~~~~~ 1027 (1201)
+.++|++++|||.|+|+.+|+|+|+.||++.
T Consensus 199 ~gv~P~~vVi~G~G~Vg~gA~~i~~~lg~~~ 229 (1042)
T PLN02819 199 LGICPLVFVFTGSGNVSQGAQEIFKLLPHTF 229 (1042)
T ss_pred CCCCCeEEEEeCCchHHHHHHHHHhhcCCCc
Confidence 9999999999999999999999999999985
No 14
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=99.40 E-value=3e-12 Score=143.36 Aligned_cols=185 Identities=17% Similarity=0.286 Sum_probs=138.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC-C
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL-P 642 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l-P 642 (1201)
...++|.| .|++|..++++|++++ ....+++||..++..+...+ +.++...++.+ ++.+++++.+.+||+||+ |
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g-~~~aLAgRs~~kl~~l~~~L-G~~~~~~p~~~--p~~~~~~~~~~~VVlncvGP 81 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREG-LTAALAGRSSAKLDALRASL-GPEAAVFPLGV--PAALEAMASRTQVVLNCVGP 81 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcC-CchhhccCCHHHHHHHHHhc-CccccccCCCC--HHHHHHHHhcceEEEecccc
Confidence 36799999 6999999999999874 55689999999999999887 45555666665 889999999999999999 7
Q ss_pred Cccc-HHHHHHHHHcCCeEEEcc---CChHHHHHH-HHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcC-CcEEEE
Q psy12817 643 YNLH-HHVAEFCIQHGKNLVTAS---YLSPEMMAL-HERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNG-GKVESF 716 (1201)
Q Consensus 643 ~~~h-~~VakacIeaGkh~VD~S---yvs~e~~eL-de~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~g-gkV~sf 716 (1201)
|..| .+++++|+.+|+||+|++ ++-+.+-.+ |++|+++|+.++++||||.-.+++-.+.+.++....+ +.+...
T Consensus 82 yt~~g~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cGFDsIPsDl~v~~l~~~~~~d~~~~~~~t 161 (382)
T COG3268 82 YTRYGEPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCGFDSIPSDLGVYALLKQALPDGTEELIAT 161 (382)
T ss_pred ccccccHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCCCCcCccchHHHHHHHhhCcccccchhhh
Confidence 7654 789999999999999997 344555554 9999999999999999999888885555555554322 111110
Q ss_pred EeecCCCCCCCCCCCccccc-cccC----hHHHHHHhccceeeeeCCeEEEecCC
Q psy12817 717 VSYCGGLPAPECSENPLRYK-FSWS----PRGVLLNTLSSAKYLQNSQVVDIPAG 766 (1201)
Q Consensus 717 ~s~cGGLPaPe~~~nPL~Yk-fSWS----p~gvL~a~~~~A~~l~dG~~v~Vp~~ 766 (1201)
++-++.- -+|. ....++.+....+..++|+.+.+|..
T Consensus 162 -------------~l~l~s~t~~g~S~GTaat~~e~l~~~~~~~~~gr~~~~P~~ 203 (382)
T COG3268 162 -------------HLALGSFTGSGISGGTAATSVEGLATAGKDPEAGRLLRVPYA 203 (382)
T ss_pred -------------heeeeecccCCcccccHHHHHHHHHhccCCcccCceeccCce
Confidence 1111111 1122 33445556667888999999999874
No 15
>KOG2733|consensus
Probab=99.37 E-value=2.1e-12 Score=145.42 Aligned_cols=131 Identities=20% Similarity=0.384 Sum_probs=109.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHh---CCCCeEEEEeCCHHHHHHHHHHc--------CCeeEEEeecCCCCchHHHhhcc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHR---DENIHITLGSLLKEDIDKVTNEF--------GRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~---~~~~~VtVadR~~ekAe~La~~~--------~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
...++|+| +|+.|..+++++.+ .++.++.||+|+++++++..+.. +....+..|.+| ++++.++.+
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n--~~Sl~emak 82 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSAN--EASLDEMAK 82 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCC--HHHHHHHHh
Confidence 45799999 69999999999987 35678999999999998877654 223367789998 899999999
Q ss_pred CCcEEEEcC-CCccc-HHHHHHHHHcCCeEEEccCChHH----HHHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 633 SADLVVSLL-PYNLH-HHVAEFCIQHGKNLVTASYLSPE----MMALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 633 ~~DVVIs~l-P~~~h-~~VakacIeaGkh~VD~Syvs~e----~~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
++.+|+||+ ||.+| .+|+++|+++|+|++|+|-.+.- ....|+.|++.|+-+++.||||.=.-+|
T Consensus 83 ~~~vivN~vGPyR~hGE~VVkacienG~~~vDISGEP~f~E~mq~kYhd~A~ekGVYIVsaCGfDSIPaDl 153 (423)
T KOG2733|consen 83 QARVIVNCVGPYRFHGEPVVKACIENGTHHVDISGEPQFMERMQLKYHDLAKEKGVYIVSACGFDSIPADL 153 (423)
T ss_pred hhEEEEeccccceecCcHHHHHHHHcCCceeccCCCHHHHHHHHHHHHHHHHhcCeEEEeecccCCCCccc
Confidence 999999999 88887 78999999999999999854332 3458999999999999999998754444
No 16
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=99.09 E-value=1.4e-09 Score=121.51 Aligned_cols=140 Identities=17% Similarity=0.199 Sum_probs=109.4
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC-CCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE-NIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~-~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|+||+|||+|.+|+.+++.+.+.+ +++ +.++||+.++++++++.+ +... .+++++++.++|+|+.|+|
T Consensus 1 mmrIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~-~~~~---------~~~~~ell~~~DvVvi~a~ 70 (265)
T PRK13304 1 MLKIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKT-GAKA---------CLSIDELVEDVDLVVECAS 70 (265)
T ss_pred CCEEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhc-CCee---------ECCHHHHhcCCCEEEEcCC
Confidence 579999999999999999998764 566 668999999999888765 3221 1235566678999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccC----ChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASY----LSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Sy----vs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
...|.++++.|+++|+|++++|. ..+..++|.+.|+++|+.++...|...|+|.+.+. .-|++.++..
T Consensus 71 ~~~~~~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~aA~~~g~~l~v~sga~~g~d~i~a~--------~~G~i~~V~~ 142 (265)
T PRK13304 71 VNAVEEVVPKSLENGKDVIIMSVGALADKELFLKLYKLAKENNCKIYLPSGAIVGLDGIKAA--------SLGEIKSVTL 142 (265)
T ss_pred hHHHHHHHHHHHHcCCCEEEEchHHhcCHHHHHHHHHHHHHcCCEEEEeCchHHhHHHHHHH--------hcCCccEEEE
Confidence 99999999999999999999875 34456789999999999998878877777665332 1256666666
Q ss_pred ecCC
Q psy12817 719 YCGG 722 (1201)
Q Consensus 719 ~cGG 722 (1201)
+..-
T Consensus 143 ~~~k 146 (265)
T PRK13304 143 TTRK 146 (265)
T ss_pred EEec
Confidence 5543
No 17
>TIGR01921 DAP-DH diaminopimelate dehydrogenase. This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.
Probab=99.09 E-value=1.1e-09 Score=125.08 Aligned_cols=143 Identities=16% Similarity=0.206 Sum_probs=103.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCH-HHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLK-EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~-ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+.||+|+|+|.+|+.+++.+.+.++++++ |++|+. +++. ... ... ... +..+++.++|+|+.|+|
T Consensus 3 kIRVgIVG~GnIGr~~a~al~~~pd~ELVgV~dr~~~~~~~---~~~---~v~--~~~-----d~~e~l~~iDVViIctP 69 (324)
T TIGR01921 3 KIRAAIVGYGNLGRSVEKAIQQQPDMELVGVFSRRGAETLD---TET---PVY--AVA-----DDEKHLDDVDVLILCMG 69 (324)
T ss_pred CcEEEEEeecHHHHHHHHHHHhCCCcEEEEEEcCCcHHHHh---hcC---Ccc--ccC-----CHHHhccCCCEEEEcCC
Confidence 57999999999999999999988889954 678885 3332 222 111 111 23444578999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccC----ChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASY----LSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Sy----vs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
...|.+.+..|+++|+|+||..+ .++...++++.|+++|-..+...|+|||++.+.-. +.+.---.| ..++.
T Consensus 70 s~th~~~~~~~L~aG~NVV~s~~~h~~~p~~~~~ld~AAk~~g~vsvi~~GwDPG~~si~r~--~~ea~lp~g--~~yt~ 145 (324)
T TIGR01921 70 SATDIPEQAPYFAQFANTVDSFDNHRDIPRHRQVMDAAAKAAGNVSVISTGWDPGMFSINRV--YGEAVLPKG--QTYTF 145 (324)
T ss_pred CccCHHHHHHHHHcCCCEEECCCcccCCHHHHHHHHHHHHHcCCEEEEECCCCcChHHHHHH--HHhccCCCC--cceec
Confidence 99999999999999999999964 34567789999998777767779999999887432 222211112 35666
Q ss_pred ecCCCC
Q psy12817 719 YCGGLP 724 (1201)
Q Consensus 719 ~cGGLP 724 (1201)
|-+|+.
T Consensus 146 wG~g~s 151 (324)
T TIGR01921 146 WGPGLS 151 (324)
T ss_pred cCCCcC
Confidence 666654
No 18
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=99.09 E-value=1.3e-09 Score=122.32 Aligned_cols=142 Identities=18% Similarity=0.199 Sum_probs=109.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhC-CCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRD-ENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~-~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+++||+|||+|.+|+.+++.|.+. ++++++ |++|++++++++++.++.... .+.+++++.++|+|+.|+
T Consensus 5 ~~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~---------~~~~eell~~~D~Vvi~t 75 (271)
T PRK13302 5 PELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPP---------VVPLDQLATHADIVVEAA 75 (271)
T ss_pred CeeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcc---------cCCHHHHhcCCCEEEECC
Confidence 358999999999999999999873 678865 889999999998887632121 123556677899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccCC-hHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeec
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASYL-SPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYC 720 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Syv-s~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~c 720 (1201)
|...|.+++..|+++|+|+++.+.. ..+.++|.+.|+++|+.++...|+--|+|.+-+. ..|+++.+...+
T Consensus 76 p~~~h~e~~~~aL~aGk~Vi~~s~gal~~~~~L~~~A~~~g~~l~v~sGa~~g~d~l~~g--------~iG~~~~v~~~t 147 (271)
T PRK13302 76 PASVLRAIVEPVLAAGKKAIVLSVGALLRNEDLIDLARQNGGQIIVPTGALLGLDAVTAA--------AEGTIHSVKMIT 147 (271)
T ss_pred CcHHHHHHHHHHHHcCCcEEEecchhHHhHHHHHHHHHHcCCEEEEcchHHHhHHHHHHH--------HcCCceEEEEEE
Confidence 9999999999999999999998743 2256788899999999998888876666543222 126677776655
Q ss_pred CC
Q psy12817 721 GG 722 (1201)
Q Consensus 721 GG 722 (1201)
..
T Consensus 148 rk 149 (271)
T PRK13302 148 RK 149 (271)
T ss_pred ec
Confidence 43
No 19
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=99.08 E-value=2.2e-09 Score=121.95 Aligned_cols=146 Identities=22% Similarity=0.274 Sum_probs=111.6
Q ss_pred CCCeEEEEcCchhH-HHHHHHHHhCCC-Ce-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEE
Q psy12817 564 ESRNVLLLGAGYVS-RPLIEYLHRDEN-IH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVV 638 (1201)
Q Consensus 564 ~mkKVLILGAG~VG-~~va~~La~~~~-~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVI 638 (1201)
+++||+|||+|.++ ..++..+...++ ++ +.++|+++++++++++.+ ++.. + .+++++++++ .|+|+
T Consensus 2 ~~irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~-~~~~----~----~~~~~~ll~~~~iD~V~ 72 (342)
T COG0673 2 KMIRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEF-GIAK----A----YTDLEELLADPDIDAVY 72 (342)
T ss_pred CeeEEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHc-CCCc----c----cCCHHHHhcCCCCCEEE
Confidence 57899999998655 568888887766 35 778899999999999998 4431 1 2356777764 79999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcE
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKV 713 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV 713 (1201)
.|+|..+|.+++.+|+++|||++++.. ..++.++|.+.|+++|+.++.+ ..++|.+-. +.+++++- ..|++
T Consensus 73 Iatp~~~H~e~~~~AL~aGkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf~p~~~~--~k~li~~g--~lG~v 148 (342)
T COG0673 73 IATPNALHAELALAALEAGKHVLCEKPLALTLEEAEELVELARKAGVKLMVGFNRRFDPAVQA--LKELIDSG--ALGEV 148 (342)
T ss_pred EcCCChhhHHHHHHHHhcCCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeehhhhcCHHHHH--HHHHHhcC--CcCce
Confidence 999999999999999999999999975 5667888999999999988764 458876543 23334332 33788
Q ss_pred EEEEeecCC
Q psy12817 714 ESFVSYCGG 722 (1201)
Q Consensus 714 ~sf~s~cGG 722 (1201)
.++......
T Consensus 149 ~~~~~~~~~ 157 (342)
T COG0673 149 VSVQASFSR 157 (342)
T ss_pred EEEEEEeec
Confidence 887765443
No 20
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=99.01 E-value=3.8e-09 Score=102.70 Aligned_cols=111 Identities=21% Similarity=0.323 Sum_probs=93.8
Q ss_pred CeEEEEcCchhHHHHHHHHHhC-CCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRD-ENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~-~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~l 641 (1201)
+||+|||+|.+|+.....+.+. +++++ .++|+++++++++++.+ ++. .. .+++++++ +.|+|+.++
T Consensus 1 i~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~-~~~-~~--------~~~~~ll~~~~~D~V~I~t 70 (120)
T PF01408_consen 1 IRVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKY-GIP-VY--------TDLEELLADEDVDAVIIAT 70 (120)
T ss_dssp EEEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHT-TSE-EE--------SSHHHHHHHTTESEEEEES
T ss_pred CEEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHh-ccc-ch--------hHHHHHHHhhcCCEEEEec
Confidence 4899999999999999888877 67774 58999999999988887 555 21 23555655 799999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
|...|.++++.|+++|+|++.+.. ..++.++|.+.++++|+.++.
T Consensus 71 p~~~h~~~~~~~l~~g~~v~~EKP~~~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 71 PPSSHAEIAKKALEAGKHVLVEKPLALTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SGGGHHHHHHHHHHTTSEEEEESSSSSSHHHHHHHHHHHHHHTSCEEE
T ss_pred CCcchHHHHHHHHHcCCEEEEEcCCcCCHHHHHHHHHHHHHhCCEEEE
Confidence 999999999999999999999965 567889999999999998764
No 21
>KOG0172|consensus
Probab=98.97 E-value=3e-11 Score=137.57 Aligned_cols=324 Identities=15% Similarity=0.050 Sum_probs=230.2
Q ss_pred EEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCCCCCCchHHhhcCcEEccCcc----CCcEEEEecCCCc-cCCCC
Q psy12817 7 IRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS----EASIIFGVKQVPV-DLLLP 81 (1201)
Q Consensus 7 I~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sagr~f~D~eY~~AGA~I~edls----~adiIlgVKepp~-~~L~~ 81 (1201)
+++|. ++.|-|++|+|-.++.|+.+|+...+|.+-.+.|-|.+|++.|..+++.-+ +.+++.|+|+.++ +.+..
T Consensus 62 L~~~v-~~~D~viSLlP~t~h~lVaK~~i~~~~~~vtsSyv~pe~~~L~~~~v~AG~ti~~e~gldpGidhm~a~~ti~~ 140 (445)
T KOG0172|consen 62 LRKEV-KPLDLVISLLPYTFHPLVAKGCIITKEDSVTSSYVDPELEELEKAAVPAGSTIMNEIGLDPGIDHMPAMKTIDL 140 (445)
T ss_pred HHhhh-cccceeeeeccchhhHHHHHHHHHhhcccccccccCHHHHhhhhhccCCCceEecccccCcchhhhhhhccchH
Confidence 34663 889999999999999999999999999999999999999999999986532 6799999999988 44445
Q ss_pred CcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccCCCCcccc
Q psy12817 82 NKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHI 161 (1201)
Q Consensus 82 ~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~tPfl~l 161 (1201)
-+.+..|.|.+|.|..-.+.+...-.-.-..||||-.-...+.|.-||+..+|-+|....-. +...+... .-.|++.
T Consensus 141 vh~hgg~i~sf~sycGglpape~s~nplgykfsws~~gvl~a~rnsAky~~~Gkiv~v~g~~-~~~~~~~~-~~~pg~a- 217 (445)
T KOG0172|consen 141 VHEHGGKIKSFKSYCGGLPAPERSNNPLGYKFSWSPLGVLLALRNSAKYYKNGKIVEVDGGD-LADTATHY-DFYPGPA- 217 (445)
T ss_pred HHhhcceeeehhhhcCCccChhhCCCCcceeeccchhhhhhhccccchhccCCeEEEecccc-HHhhccCc-ccCcccc-
Confidence 67889999999999888888888888889999999998888999999999999888654331 22221111 1123333
Q ss_pred CCCccccC------------hHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchh
Q psy12817 162 GPAHNYRN------------SMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQK 229 (1201)
Q Consensus 162 ~~~~~y~~------------~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~ 229 (1201)
..-|+| ..+|++++| |++ ...|..-+|-+-|.+|.+|.+.+..++.+
T Consensus 218 --l~~yPNrdst~y~evy~I~~ea~tilr--------gtl--ryqgf~~~i~aL~~~G~~~~da~~~~~~~--------- 276 (445)
T KOG0172|consen 218 --LECYPNRDSTEYSEVYGIPREAKTILR--------GTL--RYQGFVLIIGALVRCGLLACDALEKFSIP--------- 276 (445)
T ss_pred --ccccCCcchhhHHHHhcchHHHHHHHh--------ccc--ccccHHHHHHHHHHcCccchhhHhhcCCC---------
Confidence 334555 125555444 222 12344344445599999999998888743
Q ss_pred hhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccC
Q psy12817 230 VAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLR 309 (1201)
Q Consensus 230 ~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmk 309 (1201)
-..-+|+.++.+.+++|+.. +..|+-+||.|-..+.||.++.- +.|
T Consensus 277 ------------an~L~W~~~~~~~~g~~~~i------------------~ed~i~~i~~~~~~~~~~~l~~~--e~L-- 322 (445)
T KOG0172|consen 277 ------------ANILTWKELLTSLGGPFSEI------------------EEDDIKVICIYLSGKDPRILSTL--EWL-- 322 (445)
T ss_pred ------------CCcccHHHHHHhhcCCCcCc------------------cHHHHHHHHHHhhcCccchhhhh--Hhc--
Confidence 13557888888888888762 24567778888777777555432 232
Q ss_pred CCCCCCCCCCCCCCCCCCceeEEEeeccCCC---CCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCC
Q psy12817 310 PNHMPWLPTSDGAPPLPHRLLGICDISADPG---GSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQ 386 (1201)
Q Consensus 310 pg~~~~~~~~~~~~~~p~rlsvIvDIS~D~G---GsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~ 386 (1201)
| . ...|+...+|.+||.= -.+......|+.|.|+...+ -..+.++-....++++|.+
T Consensus 323 -g----------~--~~~k~v~~~~~~~DTl~~~l~~~l~y~~~e~Dmvvl~h~-------~~~~~p~g~~e~~t~~l~~ 382 (445)
T KOG0172|consen 323 -G----------L--FSDKLVTVRGVSLDTLCPHLEEPLYYVDTEFDMVVLQHK-------FGTEPPEGKVESITHTLVL 382 (445)
T ss_pred -C----------C--CccccccccCCchhccccccccceeccCCccceeEEEec-------ceeeCCCCceEEeeecHhh
Confidence 1 1 1246788889999952 11223334444444442211 0234455566899999999
Q ss_pred chHHHHHHHHHHhHHHHHHHHhc
Q psy12817 387 LPMEATDFFGNLVFPYALDILQS 409 (1201)
Q Consensus 387 LP~eAS~~fs~~L~pyl~~l~~~ 409 (1201)
+|+++++.|+..++++...|...
T Consensus 383 yg~~ng~samaktVg~p~ai~~~ 405 (445)
T KOG0172|consen 383 YGRENGESAMAKTVGSPTAIAAK 405 (445)
T ss_pred cCCccchhHHHHhcCchHhhhhh
Confidence 99999999999999999988643
No 22
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.95 E-value=3.8e-09 Score=107.15 Aligned_cols=130 Identities=21% Similarity=0.291 Sum_probs=98.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.+.++|+|+|+|.+|+.+++.|.+.+..+|++++|+.++++++++.+. ...+..++.+ ..++++++|+||+|+|
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~Dvvi~~~~ 90 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG-ELGIAIAYLD-----LEELLAEADLIINTTP 90 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh-hcccceeecc-----hhhccccCCEEEeCcC
Confidence 346899999999999999999988755679999999999988887652 2111123333 4455789999999999
Q ss_pred Cccc----HHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHh
Q psy12817 643 YNLH----HHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 643 ~~~h----~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei 706 (1201)
...| ....+.+++.++.++|.+|.++.. ++.+.++++|+.++++.- |+..+.+.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~-~l~~~~~~~g~~~v~g~~-------~~~~q~~~~~ 150 (155)
T cd01065 91 VGMKPGDELPLPPSLLKPGGVVYDVVYNPLET-PLLKEARALGAKTIDGLE-------MLVYQAAEAF 150 (155)
T ss_pred CCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCC-HHHHHHHHCCCceeCCHH-------HHHHHHHHHH
Confidence 8775 334467789999999999986655 888999999998887443 4555554444
No 23
>PRK11579 putative oxidoreductase; Provisional
Probab=98.94 E-value=1.4e-08 Score=117.17 Aligned_cols=142 Identities=20% Similarity=0.229 Sum_probs=106.4
Q ss_pred CCeEEEEcCchhHH-HHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSR-PLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~-~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+.||+|||+|.+|+ .++..+.+.+++++ .|+|++.++++ +.++.... .++++++++ +.|+|+.|
T Consensus 4 ~irvgiiG~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~---~~~~~~~~---------~~~~~ell~~~~vD~V~I~ 71 (346)
T PRK11579 4 KIRVGLIGYGYASKTFHAPLIAGTPGLELAAVSSSDATKVK---ADWPTVTV---------VSEPQHLFNDPNIDLIVIP 71 (346)
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHH---hhCCCCce---------eCCHHHHhcCCCCCEEEEc
Confidence 47999999999998 57788877778885 57899987654 34433322 124566665 58999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEe--ccccCchhHHHHHHHHHHHhhhcCCcEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLN--EVGLDPGIDHLLAMECIDAAHLNGGKVES 715 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~--e~GlDPGIdhmlA~~~idei~~~ggkV~s 715 (1201)
+|..+|.+++..|+++|+|++++.. ..++.++|.+.|+++|+.++. ...++|.+..+ .+.+++- .-|+|..
T Consensus 72 tp~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~--k~~i~~g--~iG~i~~ 147 (346)
T PRK11579 72 TPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTL--KALLAEG--VLGEVAY 147 (346)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHH--HHHHhcC--CCCCeEE
Confidence 9999999999999999999999975 456788999999999998765 35688876554 3333321 2378888
Q ss_pred EEeecCC
Q psy12817 716 FVSYCGG 722 (1201)
Q Consensus 716 f~s~cGG 722 (1201)
+.+.++.
T Consensus 148 ~~~~~~~ 154 (346)
T PRK11579 148 FESHFDR 154 (346)
T ss_pred EEEEecc
Confidence 8776543
No 24
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.90 E-value=7.4e-08 Score=109.08 Aligned_cols=137 Identities=20% Similarity=0.216 Sum_probs=99.8
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
++.-.+++|+|.|.+|+.....++.+| .++.+++....+...... .|. .. -.+.
T Consensus 148 ~l~gk~v~IiG~G~iG~avA~~L~~~G----------------~~V~v~~R~~~~~~~~~~-~g~--~~-------~~~~ 201 (287)
T TIGR02853 148 TIHGSNVMVLGFGRTGMTIARTFSALG----------------ARVFVGARSSADLARITE-MGL--IP-------FPLN 201 (287)
T ss_pred CCCCCEEEEEcChHHHHHHHHHHHHCC----------------CEEEEEeCCHHHHHHHHH-CCC--ee-------ecHH
Confidence 344578999999999999999999998 345666654433222211 121 11 1111
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCC-eeeecccc
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGS-IEFMNECT 350 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGs-iE~~~~~T 350 (1201)
.. .+.++.+|+||||+-. .+++.+.++. |+++ .+|+|+++++||. ++.
T Consensus 202 -~l-~~~l~~aDiVint~P~-----~ii~~~~l~~-~k~~------------------aliIDlas~Pg~tdf~~----- 250 (287)
T TIGR02853 202 -KL-EEKVAEIDIVINTIPA-----LVLTADVLSK-LPKH------------------AVIIDLASKPGGTDFEY----- 250 (287)
T ss_pred -HH-HHHhccCCEEEECCCh-----HHhCHHHHhc-CCCC------------------eEEEEeCcCCCCCCHHH-----
Confidence 11 3457789999999732 2678888888 8998 8999999999883 221
Q ss_pred CCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCc-hHHHHHHHHHHhHHHHH
Q psy12817 351 TIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQL-PMEATDFFGNLVFPYAL 404 (1201)
Q Consensus 351 Tid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~L-P~eAS~~fs~~L~pyl~ 404 (1201)
.+..|+.++..++||..+ |++|.+..++.+..+|.
T Consensus 251 -------------------Ak~~G~~a~~~~glPg~~ap~ta~~i~~~~~~~~~~ 286 (287)
T TIGR02853 251 -------------------AKKRGIKALLAPGLPGIVAPKTAGKILANVLSELLL 286 (287)
T ss_pred -------------------HHHCCCEEEEeCCCCcccCchhHHHHHHHHHHHHhh
Confidence 456799999999999999 99999999999887764
No 25
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=98.87 E-value=7.5e-09 Score=116.29 Aligned_cols=136 Identities=19% Similarity=0.273 Sum_probs=103.3
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.++..|...+-.+|+|++|+.++++++++.+.....+.++. .+.+.+.++|+||||+|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~------~~~~~~~~~DivInaTp 194 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL------ELQEELADFDLIINATS 194 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc------cchhccccCCEEEECCc
Confidence 456899999999999999999998765789999999999999988764221111111 23456678999999999
Q ss_pred CcccH-----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEE
Q psy12817 643 YNLHH-----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFV 717 (1201)
Q Consensus 643 ~~~h~-----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~ 717 (1201)
..++. ++...++..++.++|+.|.+. ...|.+.|+++|+.++++.+ |+..+.+.+ |+
T Consensus 195 ~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~-~T~ll~~A~~~G~~~~~G~~-------Ml~~Qa~~~----------f~ 256 (278)
T PRK00258 195 AGMSGELPLPPLPLSLLRPGTIVYDMIYGPL-PTPFLAWAKAQGARTIDGLG-------MLVHQAAEA----------FE 256 (278)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEeecCCC-CCHHHHHHHHCcCeecCCHH-------HHHHHHHHH----------HH
Confidence 87753 455678889999999999654 45677899999999988655 566665544 45
Q ss_pred eecCC
Q psy12817 718 SYCGG 722 (1201)
Q Consensus 718 s~cGG 722 (1201)
.|+|-
T Consensus 257 ~wtg~ 261 (278)
T PRK00258 257 LWTGV 261 (278)
T ss_pred HHcCC
Confidence 77774
No 26
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=98.82 E-value=1.4e-08 Score=113.07 Aligned_cols=131 Identities=20% Similarity=0.293 Sum_probs=101.3
Q ss_pred CCeEEEEcC-chhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGA-GYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGA-G~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|+||+|+|+ |+||+.+++.+.+.+++++ .++|++.++++.. ..+ ++.. .++++++++++|+||+++|
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-~~~--------~i~~--~~dl~~ll~~~DvVid~t~ 69 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-GAL--------GVAI--TDDLEAVLADADVLIDFTT 69 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-CCC--------Cccc--cCCHHHhccCCCEEEECCC
Confidence 579999998 9999999999988778884 4688887765543 111 2211 3457777778999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHh
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei 706 (1201)
+..|.++++.|+++|+|+|... +..++..+|.+.+++.++.+.+.+.+-+++...++.+....+
T Consensus 70 p~~~~~~~~~al~~G~~vvigttG~s~~~~~~l~~aa~~~~v~~s~n~s~g~~~~~~l~~~aa~~l 135 (257)
T PRK00048 70 PEATLENLEFALEHGKPLVIGTTGFTEEQLAELEEAAKKIPVVIAPNFSIGVNLLMKLAEKAAKYL 135 (257)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999763 466778888886677777777777777777777777666555
No 27
>PRK10206 putative oxidoreductase; Provisional
Probab=98.81 E-value=4.2e-08 Score=113.41 Aligned_cols=144 Identities=18% Similarity=0.209 Sum_probs=105.0
Q ss_pred CCeEEEEcCchhHH-HHHHHHHh-CCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 565 SRNVLLLGAGYVSR-PLIEYLHR-DENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~-~va~~La~-~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
|.||+|||+|.+++ .++..+.. .++++| .|+|++.+++ +.++.++.+. +. ++++++++ +.|+|+.
T Consensus 1 ~irvgiiG~G~~~~~~h~~~~~~~~~~~~l~av~d~~~~~~-~~~~~~~~~~-----~~----~~~~ell~~~~iD~V~I 70 (344)
T PRK10206 1 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPE-EQAPIYSHIH-----FT----SDLDEVLNDPDVKLVVV 70 (344)
T ss_pred CeEEEEECCCHHHhheehhhHhcCCCCEEEEEEEcCChhHH-HHHHhcCCCc-----cc----CCHHHHhcCCCCCEEEE
Confidence 57999999999764 45666644 356775 5899988655 5666664332 11 24666664 6899999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVE 714 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~ 714 (1201)
|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.. ..++|.+.. +++++++- .-|+|.
T Consensus 71 ~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~--~k~li~~g--~iG~i~ 146 (344)
T PRK10206 71 CTHADSHFEYAKRALEAGKNVLVEKPFTPTLAEAKELFALAKSKGLTVTPYQNRRFDSCFLT--AKKAIESG--KLGEIV 146 (344)
T ss_pred eCCchHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHhCCEEEEEEeeeECHHHHH--HHHHHHcC--CCCCeE
Confidence 99999999999999999999999975 4578889999999999987754 468886433 23344331 237888
Q ss_pred EEEeecCC
Q psy12817 715 SFVSYCGG 722 (1201)
Q Consensus 715 sf~s~cGG 722 (1201)
++.+.++.
T Consensus 147 ~i~~~~~~ 154 (344)
T PRK10206 147 EVESHFDY 154 (344)
T ss_pred EEEEEecc
Confidence 88876654
No 28
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=98.77 E-value=1.9e-08 Score=113.65 Aligned_cols=137 Identities=19% Similarity=0.244 Sum_probs=100.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC-eeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR-VEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~-v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
..++|+|||+|.+|++++..|...+-.+|+|++|+.++++.+++.+.. .....+.. .+.+.+.++++|+||||+|
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~----~~~~~~~~~~aDiVInaTp 201 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA----GSDLAAALAAADGLVHATP 201 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe----ccchHhhhCCCCEEEECCc
Confidence 458999999999999999999987655799999999999999876521 11111111 1235556788999999998
Q ss_pred CcccH----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 643 YNLHH----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 643 ~~~h~----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
..++. ++....++.+.-++|+.|.+.+. .+.+.|+++|+.++++.+ |+..+.+.+ |+.
T Consensus 202 ~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T-~ll~~A~~~G~~~~~G~~-------ML~~Qa~~~----------f~~ 263 (284)
T PRK12549 202 TGMAKHPGLPLPAELLRPGLWVADIVYFPLET-ELLRAARALGCRTLDGGG-------MAVFQAVDA----------FEL 263 (284)
T ss_pred CCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCC-HHHHHHHHCCCeEecCHH-------HHHHHHHHH----------HHH
Confidence 76532 23345577788899999976554 566899999999998666 566665544 457
Q ss_pred ecCC
Q psy12817 719 YCGG 722 (1201)
Q Consensus 719 ~cGG 722 (1201)
|+|-
T Consensus 264 wtg~ 267 (284)
T PRK12549 264 FTGR 267 (284)
T ss_pred hcCC
Confidence 8874
No 29
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.74 E-value=6.1e-08 Score=109.69 Aligned_cols=139 Identities=17% Similarity=0.297 Sum_probs=105.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK---EDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~---ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
+.++++|+|+|.+|++++..|++.+-.+|+|++|+. ++++++++.+ +.+.....|+.+ .+.+.+.++++|+
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~--~~~~~~~~~~~Di 202 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLND--TEKLKAEIASSDI 202 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhh--hhHHHhhhccCCE
Confidence 457999999999999999999987544699999996 7787777654 234455677776 6678888889999
Q ss_pred EEEcCCCcccH-----HH-HHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcC
Q psy12817 637 VVSLLPYNLHH-----HV-AEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNG 710 (1201)
Q Consensus 637 VIs~lP~~~h~-----~V-akacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~g 710 (1201)
||||+|..+++ ++ ....+..+..++|+.|.+.+ ..|.+.|+++|..++++.+ |+..+.+.+
T Consensus 203 lINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~-T~ll~~A~~~G~~~~~G~~-------ML~~Qa~~~----- 269 (289)
T PRK12548 203 LVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNPKK-TKLLEDAEAAGCKTVGGLG-------MLLWQGAEA----- 269 (289)
T ss_pred EEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCCCC-CHHHHHHHHCCCeeeCcHH-------HHHHHHHHH-----
Confidence 99999977643 12 23456778889999997665 4455889999999998766 566665544
Q ss_pred CcEEEEEeecCC
Q psy12817 711 GKVESFVSYCGG 722 (1201)
Q Consensus 711 gkV~sf~s~cGG 722 (1201)
|+.|+|-
T Consensus 270 -----f~lwtg~ 276 (289)
T PRK12548 270 -----YKLYTGK 276 (289)
T ss_pred -----HHHhcCC
Confidence 4578874
No 30
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=98.73 E-value=6.7e-08 Score=108.16 Aligned_cols=126 Identities=22% Similarity=0.261 Sum_probs=91.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|+||+|+|+|.||+.+++.|.+.++.++. ++++.. ..++....+. ++. +.+ +++++-.+.|+||.|+|
T Consensus 1 m~rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~-~~~~~~~~~~~~~~-----~~~----d~~~l~~~~DvVve~t~ 70 (265)
T PRK13303 1 MMKVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEH-SIDAVRRALGEAVR-----VVS----SVDALPQRPDLVVECAG 70 (265)
T ss_pred CcEEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCC-CHHHHhhhhccCCe-----eeC----CHHHhccCCCEEEECCC
Confidence 68999999999999999999988777754 344432 2222222221 111 111 23333346999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccC---ChHH-HHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASY---LSPE-MMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Sy---vs~e-~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
...|.+++..|+++|+|+++++. ..++ ...|.+.|++.|+.++...|+..|+|-+-+.
T Consensus 71 ~~~~~e~~~~aL~aGk~Vvi~s~~Al~d~~~~~~L~~~A~~~g~~l~v~sga~gg~d~l~~~ 132 (265)
T PRK13303 71 HAALKEHVVPILKAGIDCAVISVGALADEALRERLEQAAEAGGARLHLLSGAIGGIDALAAA 132 (265)
T ss_pred HHHHHHHHHHHHHcCCCEEEeChHHhcCHHHHHHHHHHHHHCCCEEEEeChHhhCHHHHHHH
Confidence 99999999999999999999875 2344 4678889999999999889988887766443
No 31
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=98.72 E-value=4.8e-08 Score=110.40 Aligned_cols=140 Identities=16% Similarity=0.225 Sum_probs=99.7
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC-eeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR-VEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~-v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+.++|+|+|+|.+|++++..|.+.+-.+|+|++|+.++++++++.+.. .......+.+ ...+.+.+.++|+|||++|
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~--~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD--ARGIEDVIAAADGVVNATP 203 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC--HhHHHHHHhhcCEEEEcCC
Confidence 357999999999999999999987666899999999999999876521 1100111122 2233445567999999999
Q ss_pred CcccH----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 643 YNLHH----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 643 ~~~h~----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
..++. ++-...+..+.-++|+.|.+.++. +.+.|+++|..++++.+ |+..+.+. +|+.
T Consensus 204 ~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~-ll~~A~~~G~~~~~Gl~-------MLv~Qa~~----------~f~l 265 (283)
T PRK14027 204 MGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETE-LLKAARALGCETLDGTR-------MAIHQAVD----------AFRL 265 (283)
T ss_pred CCCCCCCCCCCCHHHcCCCcEEEEcccCCCCCH-HHHHHHHCCCEEEccHH-------HHHHHHHH----------HHHH
Confidence 77642 233355677778999999765544 45889999999998766 55555443 4567
Q ss_pred ecCCC
Q psy12817 719 YCGGL 723 (1201)
Q Consensus 719 ~cGGL 723 (1201)
|+|-.
T Consensus 266 w~G~~ 270 (283)
T PRK14027 266 FTGLE 270 (283)
T ss_pred HhCCC
Confidence 88754
No 32
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=98.72 E-value=1.8e-07 Score=108.27 Aligned_cols=121 Identities=12% Similarity=0.117 Sum_probs=95.9
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCC-CCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDE-NIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~-~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+..||+|+|+ ++|+..++.+.+.+ +++ +.|+|++.++++++++++ ++.. ..++++++++.|+++.++
T Consensus 2 ~~~rVgViG~-~~G~~h~~al~~~~~~~eLvaV~d~~~erA~~~A~~~-gi~~---------y~~~eell~d~Di~~V~i 70 (343)
T TIGR01761 2 DVQSVVVCGT-RFGQFYLAAFAAAPERFELAGILAQGSERSRALAHRL-GVPL---------YCEVEELPDDIDIACVVV 70 (343)
T ss_pred CCcEEEEEeH-HHHHHHHHHHHhCCCCcEEEEEEcCCHHHHHHHHHHh-CCCc---------cCCHHHHhcCCCEEEEEe
Confidence 3589999999 56999999998876 677 668999999999999988 4441 124666666666666655
Q ss_pred ----CCcccHHHHHHHHHcCCeEEEccCC-hHHHHHHHHHHHHcCCEEEeccccCchhHH
Q psy12817 642 ----PYNLHHHVAEFCIQHGKNLVTASYL-SPEMMALHERAASAGITVLNEVGLDPGIDH 696 (1201)
Q Consensus 642 ----P~~~h~~VakacIeaGkh~VD~Syv-s~e~~eLde~AkeAGVtil~e~GlDPGIdh 696 (1201)
|...|.+++++|+++|+|++++..+ .++.++|.+.|+++|+.++. .-+.|.+..
T Consensus 71 pt~~P~~~H~e~a~~aL~aGkHVL~EKPla~~Ea~el~~~A~~~g~~l~v-~~f~p~~~~ 129 (343)
T TIGR01761 71 RSAIVGGQGSALARALLARGIHVLQEHPLHPRDIQDLLRLAERQGRRYLV-NTFYPHLPA 129 (343)
T ss_pred CCCCCCccHHHHHHHHHhCCCeEEEcCCCCHHHHHHHHHHHHHcCCEEEE-EecCHHHHH
Confidence 4579999999999999999999864 45788899999999999885 347776443
No 33
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=98.68 E-value=7.7e-08 Score=107.77 Aligned_cols=130 Identities=17% Similarity=0.252 Sum_probs=95.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeE-EEEeCC-HHHH-HHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHI-TLGSLL-KEDI-DKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~V-tVadR~-~ekA-e~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
|+||+|+| +|+||+.+++.+.+.+++++ .++||. .+.. +.+.... +....-+.+.+ +++++..++|+||.+
T Consensus 1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d~~~~~~~~~~~~~~~-~~~~~gv~~~~----d~~~l~~~~DvVIdf 75 (266)
T TIGR00036 1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFERHGSSLQGTDAGELA-GIGKVGVPVTD----DLEAVETDPDVLIDF 75 (266)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccCCCHHHhc-CcCcCCceeeC----CHHHhcCCCCEEEEC
Confidence 57999999 69999999999998888884 456743 2221 1111111 11000011222 244443569999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLA 699 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA 699 (1201)
+|+..|.++++.|+++|+|+|..+ +..++.++|.+.|+++|+.++....++.|+.-|+.
T Consensus 76 T~p~~~~~~~~~al~~g~~vVigttg~~~e~~~~l~~aA~~~g~~v~~a~NfSlGv~ll~~ 136 (266)
T TIGR00036 76 TTPEGVLNHLKFALEHGVRLVVGTTGFSEEDKQELADLAEKAGIAAVIAPNFSIGVNLMFK 136 (266)
T ss_pred CChHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHhcCCccEEEECcccHHHHHHHH
Confidence 999999999999999999999864 56678889999999999999999999999876654
No 34
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=98.68 E-value=1e-07 Score=107.62 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=97.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.++|+|||+|.+|++++..|.+.+-.+|+|++|+.++++++++.+.....+ ..+.. .+++.+.+.++|+||||+|.
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~-~~~~~--~~~~~~~~~~~DiVInaTp~ 200 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVI-TRLEG--DSGGLAIEKAAEVLVSTVPA 200 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcc-eeccc--hhhhhhcccCCCEEEECCCC
Confidence 4579999999999999999999876667999999999999999876321111 11111 13455667889999999997
Q ss_pred cccHH--HHHHH--------HHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcE
Q psy12817 644 NLHHH--VAEFC--------IQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKV 713 (1201)
Q Consensus 644 ~~h~~--Vakac--------IeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV 713 (1201)
.+... ....+ +..+..++|+-|.+.+ ..|.+.|+++|..++++.+ |+..+.+.+
T Consensus 201 g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P~~-T~ll~~A~~~G~~~~~Gl~-------MLv~Qa~~~-------- 264 (282)
T TIGR01809 201 DVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDPWP-TPLVAIVSAAGWRVISGLQ-------MLLHQGFAQ-------- 264 (282)
T ss_pred CCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCCCC-CHHHHHHHHCCCEEECcHH-------HHHHHHHHH--------
Confidence 65322 11111 2346679999997554 4455889999999998666 566554444
Q ss_pred EEEEeecCC
Q psy12817 714 ESFVSYCGG 722 (1201)
Q Consensus 714 ~sf~s~cGG 722 (1201)
|+.|+|-
T Consensus 265 --f~lwtg~ 271 (282)
T TIGR01809 265 --FEQWTGM 271 (282)
T ss_pred --HHHHHCC
Confidence 4578874
No 35
>KOG2741|consensus
Probab=98.65 E-value=5.3e-07 Score=102.82 Aligned_cols=151 Identities=18% Similarity=0.222 Sum_probs=116.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCC--CCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDE--NIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLV 637 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~--~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVV 637 (1201)
....|++|+|+|.+++-.++.|...+ +++ |.|++|+.++|+++|+.+ ++. ...+ ...+++++++ +|+|
T Consensus 4 s~~ir~Gi~g~g~ia~~f~~al~~~p~s~~~Ivava~~s~~~A~~fAq~~-~~~--~~k~----y~syEeLakd~~vDvV 76 (351)
T KOG2741|consen 4 SATIRWGIVGAGRIARDFVRALHTLPESNHQIVAVADPSLERAKEFAQRH-NIP--NPKA----YGSYEELAKDPEVDVV 76 (351)
T ss_pred CceeEEEEeehhHHHHHHHHHhccCcccCcEEEEEecccHHHHHHHHHhc-CCC--CCcc----ccCHHHHhcCCCcCEE
Confidence 34579999999999999999987655 666 568999999999999986 331 1112 2357777775 6999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEecc--ccCchhHHHHHHHHHHHhh-hcCC
Q psy12817 638 VSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNEV--GLDPGIDHLLAMECIDAAH-LNGG 711 (1201)
Q Consensus 638 Is~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e~--GlDPGIdhmlA~~~idei~-~~gg 711 (1201)
+..+|...|.+++..|+++|||++++.. ..++.+++-++|+++|+.+|.++ .+.|-..- +.+.+. ..-|
T Consensus 77 yi~~~~~qH~evv~l~l~~~K~VL~EKPla~n~~e~~~iveaA~~rgv~~meg~~~R~~P~~~~-----lke~l~~~~~G 151 (351)
T KOG2741|consen 77 YISTPNPQHYEVVMLALNKGKHVLCEKPLAMNVAEAEEIVEAAEARGVFFMEGLWWRFFPRYAK-----LKELLSSGVLG 151 (351)
T ss_pred EeCCCCccHHHHHHHHHHcCCcEEecccccCCHHHHHHHHHHHHHcCcEEEeeeeeecCcHHHH-----HHHHHhccccc
Confidence 9999999999999999999999999975 56788999999999999998754 46664332 122232 2347
Q ss_pred cEEEEEeecCCCCCC
Q psy12817 712 KVESFVSYCGGLPAP 726 (1201)
Q Consensus 712 kV~sf~s~cGGLPaP 726 (1201)
.|.++.+ |.+.|.+
T Consensus 152 dvk~v~~-~~~f~~~ 165 (351)
T KOG2741|consen 152 DVKSVEV-EFGFPFP 165 (351)
T ss_pred cceEEEE-ecCCCcc
Confidence 8889888 7777765
No 36
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=98.63 E-value=7.6e-08 Score=108.61 Aligned_cols=139 Identities=24% Similarity=0.388 Sum_probs=102.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.++|+|+|+|..+++++..|++.+-.+|+|++|+.++++++++.++.... ...+.+ ...+... .++|+|||++|.
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~~~~~~--~~~~~~~-~~~dliINaTp~ 200 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-AVEAAA--LADLEGL-EEADLLINATPV 200 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-cccccc--ccccccc-cccCEEEECCCC
Confidence 458999999999999999999998777899999999999999988753211 111111 1112211 169999999998
Q ss_pred cccHH-----HHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 644 NLHHH-----VAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 644 ~~h~~-----VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
.++.. +-..++..+.-++|+-|.+.++.-| +.|+++|..++++.| |+..+.+ ++|+.
T Consensus 201 Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL-~~A~~~G~~~idGl~-------Mlv~Qaa----------~aF~l 262 (283)
T COG0169 201 GMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLL-REARAQGAKTIDGLG-------MLVHQAA----------EAFEL 262 (283)
T ss_pred CCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHH-HHHHHcCCeEECcHH-------HHHHHHH----------HHHHH
Confidence 77543 3357788888899999987655444 889999999988777 4555443 34668
Q ss_pred ecCCCC
Q psy12817 719 YCGGLP 724 (1201)
Q Consensus 719 ~cGGLP 724 (1201)
|+|-.|
T Consensus 263 wtg~~p 268 (283)
T COG0169 263 WTGVEP 268 (283)
T ss_pred HhCCCC
Confidence 888755
No 37
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.63 E-value=1.3e-07 Score=95.53 Aligned_cols=98 Identities=21% Similarity=0.351 Sum_probs=73.9
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+.+.++|+|||+|.+|+.++.+|...+--+|+|++|+.++++++++.+++......+. +++.+.+.++|+||+|+
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~-----~~~~~~~~~~DivI~aT 83 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPL-----EDLEEALQEADIVINAT 83 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG-----GGHCHHHHTESEEEE-S
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeH-----HHHHHHHhhCCeEEEec
Confidence 4678999999999999999999999865569999999999999999885433333343 34667788999999999
Q ss_pred CCcccHHHHHHHHHcC----CeEEEccC
Q psy12817 642 PYNLHHHVAEFCIQHG----KNLVTASY 665 (1201)
Q Consensus 642 P~~~h~~VakacIeaG----kh~VD~Sy 665 (1201)
|..++ .+-+..++.. .-++|+++
T Consensus 84 ~~~~~-~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 84 PSGMP-IITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp STTST-SSTHHHHTTTCHHCSEEEES-S
T ss_pred CCCCc-ccCHHHHHHHHhhhhceecccc
Confidence 87654 3334444444 36888875
No 38
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=98.62 E-value=2.5e-07 Score=104.86 Aligned_cols=139 Identities=17% Similarity=0.188 Sum_probs=99.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC---HHHHHHHHHHcCC---eeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL---KEDIDKVTNEFGR---VEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~---~ekAe~La~~~~~---v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
+.++++|||+|..+++++..|+..+-.+|+|++|+ .++++++++.++. ......+..+ .+.+.+.+.++|+|
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~--~~~l~~~~~~aDiv 200 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD--QQAFAEALASADIL 200 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhh--hhhhhhhcccCCEE
Confidence 45799999999999999999988766689999999 4689999887632 1111122221 22355566789999
Q ss_pred EEcCCCcccHH------HHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCC
Q psy12817 638 VSLLPYNLHHH------VAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGG 711 (1201)
Q Consensus 638 Is~lP~~~h~~------VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~gg 711 (1201)
|||+|..+.+. .-...++.+..++|+.|.+.+. .|.+.|+++|+.++++.+ |+..+.+.+
T Consensus 201 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-~ll~~A~~~G~~~~~Gl~-------ML~~Qa~~~------ 266 (288)
T PRK12749 201 TNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMT-KLLQQAQQAGCKTIDGYG-------MLLWQGAEQ------ 266 (288)
T ss_pred EECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCCCccC-HHHHHHHHCCCeEECCHH-------HHHHHHHHH------
Confidence 99999766431 1224466778899999976654 566899999999998766 566665544
Q ss_pred cEEEEEeecCC
Q psy12817 712 KVESFVSYCGG 722 (1201)
Q Consensus 712 kV~sf~s~cGG 722 (1201)
|+.|+|-
T Consensus 267 ----f~lwtg~ 273 (288)
T PRK12749 267 ----FTLWTGK 273 (288)
T ss_pred ----HHHhcCC
Confidence 4578874
No 39
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=98.62 E-value=1.7e-07 Score=104.96 Aligned_cols=133 Identities=18% Similarity=0.299 Sum_probs=98.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCee-EEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVE-ATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~-~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
..++|+|+|+|.+|++++..|.+.+ .+|++++|+.++++++++.+.... ....+. +. ....++|+||||+|
T Consensus 116 ~~k~vliiGaGg~g~aia~~L~~~g-~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-----~~--~~~~~~DivInatp 187 (270)
T TIGR00507 116 PNQRVLIIGAGGAARAVALPLLKAD-CNVIIANRTVSKAEELAERFQRYGEIQAFSM-----DE--LPLHRVDLIINATS 187 (270)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHhhcCceEEech-----hh--hcccCccEEEECCC
Confidence 4579999999999999999999875 699999999999999887753211 111111 11 12357999999999
Q ss_pred CcccHH-----HHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEE
Q psy12817 643 YNLHHH-----VAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFV 717 (1201)
Q Consensus 643 ~~~h~~-----VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~ 717 (1201)
..++.. +....++.++.++|++|.+++. .|.+.|+++|+.++++.+ |+..+.+.+ |+
T Consensus 188 ~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T-~ll~~A~~~G~~~vdG~~-------Ml~~Qa~~~----------f~ 249 (270)
T TIGR00507 188 AGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET-PFLAEAKSLGTKTIDGLG-------MLVAQAALA----------FE 249 (270)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC-HHHHHHHHCCCeeeCCHH-------HHHHHHHHH----------HH
Confidence 876432 2356678899999999987766 577999999999998665 566665544 45
Q ss_pred eecCC
Q psy12817 718 SYCGG 722 (1201)
Q Consensus 718 s~cGG 722 (1201)
.|+|-
T Consensus 250 ~w~g~ 254 (270)
T TIGR00507 250 LWTGV 254 (270)
T ss_pred HHcCC
Confidence 78874
No 40
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=98.53 E-value=8.3e-07 Score=92.15 Aligned_cols=110 Identities=21% Similarity=0.303 Sum_probs=80.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|+||.+||.|.||+++++.|.+. +++|++.||++++++++.+. ++.. .++..++++++|+|+.|+|..
T Consensus 1 m~~Ig~IGlG~mG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~--g~~~---------~~s~~e~~~~~dvvi~~v~~~ 68 (163)
T PF03446_consen 1 MMKIGFIGLGNMGSAMARNLAKA-GYEVTVYDRSPEKAEALAEA--GAEV---------ADSPAEAAEQADVVILCVPDD 68 (163)
T ss_dssp -BEEEEE--SHHHHHHHHHHHHT-TTEEEEEESSHHHHHHHHHT--TEEE---------ESSHHHHHHHBSEEEE-SSSH
T ss_pred CCEEEEEchHHHHHHHHHHHHhc-CCeEEeeccchhhhhhhHHh--hhhh---------hhhhhhHhhcccceEeecccc
Confidence 79999999999999999999876 68999999999999998875 3332 235677788899999999964
Q ss_pred cc-HHHHH-----HHHHcCCeEEEccCChHH-HHHHHHHHHHcCCEEEe
Q psy12817 645 LH-HHVAE-----FCIQHGKNLVTASYLSPE-MMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h-~~Vak-----acIeaGkh~VD~Syvs~e-~~eLde~AkeAGVtil~ 686 (1201)
-. ..+.. ..++.|+-++|.|..+++ .+++.+.++++|+.++.
T Consensus 69 ~~v~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vd 117 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVD 117 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEE
T ss_pred hhhhhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeee
Confidence 32 22322 334678889999876664 67898999999988764
No 41
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=98.51 E-value=4.1e-07 Score=102.35 Aligned_cols=127 Identities=21% Similarity=0.268 Sum_probs=95.2
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
++++|+|+|..+++++..|.+.+-.+|+|++|+.++++++++.++ .. ..+ .+. ..++|+||||+|..+
T Consensus 123 ~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~-~~-----~~~----~~~--~~~~dlvINaTp~Gm 190 (272)
T PRK12550 123 LVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG-YE-----WRP----DLG--GIEADILVNVTPIGM 190 (272)
T ss_pred CeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC-Cc-----chh----hcc--cccCCEEEECCcccc
Confidence 589999999999999999998766679999999999999988662 11 111 121 246899999999776
Q ss_pred cH-------HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 646 HH-------HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 646 h~-------~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
+. ++-...+..+.-++|+.|.+.+. .|.+.|+++|..++++.+ |+..+.+.+ |+.
T Consensus 191 ~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T-~ll~~A~~~G~~~i~Gl~-------MLi~Qa~~~----------f~l 252 (272)
T PRK12550 191 AGGPEADKLAFPEAEIDAASVVFDVVALPAET-PLIRYARARGKTVITGAE-------VIALQAVEQ----------FVL 252 (272)
T ss_pred CCCCccccCCCCHHHcCCCCEEEEeecCCccC-HHHHHHHHCcCeEeCCHH-------HHHHHHHHH----------HHH
Confidence 52 24445577778899999986544 455889999999998665 566655444 467
Q ss_pred ecCC
Q psy12817 719 YCGG 722 (1201)
Q Consensus 719 ~cGG 722 (1201)
|+|-
T Consensus 253 wtg~ 256 (272)
T PRK12550 253 YTGV 256 (272)
T ss_pred HhCC
Confidence 8874
No 42
>PRK06270 homoserine dehydrogenase; Provisional
Probab=98.43 E-value=1.6e-06 Score=100.63 Aligned_cols=144 Identities=24% Similarity=0.306 Sum_probs=96.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC---------CCe-EEEEeC----------CHHHHHHHHHHcCCeeEEEeecCCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE---------NIH-ITLGSL----------LKEDIDKVTNEFGRVEATLIDVNNGGS 624 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~---------~~~-VtVadR----------~~ekAe~La~~~~~v~~v~lDV~D~~~ 624 (1201)
..||+|+|+|.||+.+++.|.+.. +++ +.++|+ +.+++..+++........ -+... .
T Consensus 2 ~i~V~IiG~G~VG~~~~~~L~~~~~~~~~~~g~~~~vvai~d~~~~~~~~~Gi~~~~~~~~~~~~~~~~~~-~~~~~--~ 78 (341)
T PRK06270 2 EMKIALIGFGGVGQGVAELLAEKREYLKKRYGLDLKVVAIADSSGSAIDPDGLDLELALKVKEETGKLADY-PEGGG--E 78 (341)
T ss_pred eEEEEEECCCHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCCcccCcCCCCHHHHHHHHhccCCcccC-ccccc--c
Confidence 469999999999999999987652 456 446775 455665555543211110 00000 1
Q ss_pred hHHHhhcc--CCcEEEEcCCCccc-----HHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEecc---ccCc
Q psy12817 625 DNLSGLVR--SADLVVSLLPYNLH-----HHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEV---GLDP 692 (1201)
Q Consensus 625 e~L~elI~--~~DVVIs~lP~~~h-----~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~---GlDP 692 (1201)
.++.+++. ++|+||.|+|...| .++++.|+++|+|+|+.+ ..+....+|.+.|+++|+.++.+. |.-|
T Consensus 79 ~d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A~~~g~~~~~ea~v~~glP 158 (341)
T PRK06270 79 ISGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKELAKKNGVRFRYEATVGGAMP 158 (341)
T ss_pred CCHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHHHHcCCEEEEeeeeeechh
Confidence 23455553 68999999998766 678999999999999973 555567789999999999998764 5666
Q ss_pred hhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 693 GIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 693 GIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
-+..+ .+. -.+++|.++..
T Consensus 159 ii~~l------~~~-l~g~~I~~I~G 177 (341)
T PRK06270 159 IINLA------KET-LAGNDIKSIKG 177 (341)
T ss_pred HHHHH------Hhh-cccCceEEEEE
Confidence 55443 222 13566666553
No 43
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=98.30 E-value=1.3e-06 Score=101.22 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=70.8
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEE-EeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEAT-LIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v-~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+|+||+|+|+ |++|+.+++.|.++++++++.+.++.+..+.++..+++.... ..++.+ .+.. ..+++|+|+.|+
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~--~~~~--~~~~vD~Vf~al 76 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEP--LDPE--ILAGADVVFLAL 76 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeec--CCHH--HhcCCCEEEECC
Confidence 4789999995 999999999999988888655443444444455444433211 112222 2222 346899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEcc
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~S 664 (1201)
|...|.+++..|+++|+|+||.|
T Consensus 77 P~~~~~~~v~~a~~aG~~VID~S 99 (343)
T PRK00436 77 PHGVSMDLAPQLLEAGVKVIDLS 99 (343)
T ss_pred CcHHHHHHHHHHHhCCCEEEECC
Confidence 99999999999999999999997
No 44
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=98.26 E-value=8.8e-06 Score=88.28 Aligned_cols=136 Identities=21% Similarity=0.276 Sum_probs=105.6
Q ss_pred CeEEEEcCchhHHHHHHHHHhC-CCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRD-ENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~-~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
++|+|+|||.+|..+++.+.+. .+++ +.++||+.++++++.+.++... ..++.+++.+.|+||.|...
T Consensus 1 l~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~----------~s~ide~~~~~DlvVEaAS~ 70 (255)
T COG1712 1 LKVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRC----------VSDIDELIAEVDLVVEAASP 70 (255)
T ss_pred CeEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCc----------cccHHHHhhccceeeeeCCH
Confidence 5899999999999999988764 2455 7889999999999988774322 12467777899999999987
Q ss_pred cccHHHHHHHHHcCCeEEEccC---ChHHHH-HHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEee
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASY---LSPEMM-ALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSY 719 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Sy---vs~e~~-eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~ 719 (1201)
..-.+.+..++++|+|++-+|. ..+..+ .+.+.||..|..+..-.|---|+|-+.+.+ + |.|+++..-
T Consensus 71 ~Av~e~~~~~L~~g~d~iV~SVGALad~~l~erl~~lak~~~~rv~~pSGAiGGlD~l~aar----~----g~i~~V~lt 142 (255)
T COG1712 71 EAVREYVPKILKAGIDVIVMSVGALADEGLRERLRELAKCGGARVYLPSGAIGGLDALAAAR----V----GGIEEVVLT 142 (255)
T ss_pred HHHHHHhHHHHhcCCCEEEEechhccChHHHHHHHHHHhcCCcEEEecCccchhHHHHHHhh----c----CCeeEEEEE
Confidence 6667888999999999999974 444444 466789999999887788888888876653 1 556666543
No 45
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=98.26 E-value=6e-06 Score=93.43 Aligned_cols=110 Identities=17% Similarity=0.274 Sum_probs=85.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
+||.+||.|.||.+++..|.+. +++++|.||+++++.++.... ++.. .+...++++++|+||.|+|..-
T Consensus 1 ~kIafIGLG~MG~pmA~~L~~a-G~~v~v~~r~~~ka~~~~~~~-Ga~~---------a~s~~eaa~~aDvVitmv~~~~ 69 (286)
T COG2084 1 MKIAFIGLGIMGSPMAANLLKA-GHEVTVYNRTPEKAAELLAAA-GATV---------AASPAEAAAEADVVITMLPDDA 69 (286)
T ss_pred CeEEEEcCchhhHHHHHHHHHC-CCEEEEEeCChhhhhHHHHHc-CCcc---------cCCHHHHHHhCCEEEEecCCHH
Confidence 5899999999999999999987 589999999999966655554 3332 2245778889999999999765
Q ss_pred cHHHHH-------HHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 646 HHHVAE-------FCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 646 h~~Vak-------acIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
+..-+- ..++.|+.+||.|.+++ ..+++.+.+++.|+.++.
T Consensus 70 ~V~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lD 118 (286)
T COG2084 70 AVRAVLFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLD 118 (286)
T ss_pred HHHHHHhCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEe
Confidence 533222 22346999999998666 468899999999999875
No 46
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=98.26 E-value=5.9e-06 Score=77.73 Aligned_cols=88 Identities=22% Similarity=0.276 Sum_probs=68.5
Q ss_pred eEEEEcCchhHHHHHHHHHhCC--CCeEEEE-eCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDE--NIHITLG-SLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~--~~~VtVa-dR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
||+|||+|.||..+++.|.+.+ ..+|+++ +|+++++++++++++ +.... ....++++++|+||.|+|+
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~advvilav~p 71 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG-VQATA--------DDNEEAAQEADVVILAVKP 71 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT-TEEES--------EEHHHHHHHTSEEEE-S-G
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc-ccccc--------CChHHhhccCCEEEEEECH
Confidence 7999999999999999998874 3678855 999999999999884 33221 1355667789999999998
Q ss_pred cccHHHHHHH--HHcCCeEEEc
Q psy12817 644 NLHHHVAEFC--IQHGKNLVTA 663 (1201)
Q Consensus 644 ~~h~~Vakac--IeaGkh~VD~ 663 (1201)
....++++.. ...++.+|+.
T Consensus 72 ~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 72 QQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp GGHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHhhccCCCEEEEe
Confidence 8877877765 6788888886
No 47
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=98.22 E-value=4.8e-06 Score=98.22 Aligned_cols=95 Identities=21% Similarity=0.309 Sum_probs=78.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+.+.++|+|||+|.||..++.+|.+.+-.+|+|++|+.++|++++.++. ..++. .+.+.+.+.++|+||+++
T Consensus 175 ~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-~~~~~-------l~el~~~l~~~DvVissT 246 (414)
T COG0373 175 SLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-AEAVA-------LEELLEALAEADVVISST 246 (414)
T ss_pred ccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-Ceeec-------HHHHHHhhhhCCEEEEec
Confidence 4578999999999999999999999877789999999999999999984 44332 457888999999999998
Q ss_pred CC---cccHHHHHHHHHcCCe--EEEcc
Q psy12817 642 PY---NLHHHVAEFCIQHGKN--LVTAS 664 (1201)
Q Consensus 642 P~---~~h~~VakacIeaGkh--~VD~S 664 (1201)
.. ......++.+++..++ +||++
T Consensus 247 sa~~~ii~~~~ve~a~~~r~~~livDia 274 (414)
T COG0373 247 SAPHPIITREMVERALKIRKRLLIVDIA 274 (414)
T ss_pred CCCccccCHHHHHHHHhcccCeEEEEec
Confidence 42 3456777888777766 67775
No 48
>PRK08618 ornithine cyclodeaminase; Validated
Probab=98.20 E-value=3.2e-06 Score=97.31 Aligned_cols=104 Identities=16% Similarity=0.230 Sum_probs=79.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++|+|||+|.+|+.++..+....+ -+|.|++|++++++++++.+. +++... + ++++++++++|+||+|
T Consensus 127 ~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~aDiVi~a 199 (325)
T PRK08618 127 AKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYV--V-----NSADEAIEEADIIVTV 199 (325)
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEE--e-----CCHHHHHhcCCEEEEc
Confidence 4789999999999999988765433 469999999999999887552 222221 2 2466777899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERA 677 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~A 677 (1201)
+|.. |+.+. .+++.|+|+..+....+.+++++...
T Consensus 200 T~s~-~p~i~-~~l~~G~hV~~iGs~~p~~~E~~~~~ 234 (325)
T PRK08618 200 TNAK-TPVFS-EKLKKGVHINAVGSFMPDMQELPSEA 234 (325)
T ss_pred cCCC-CcchH-HhcCCCcEEEecCCCCcccccCCHHH
Confidence 9965 88888 99999999998866556666665443
No 49
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.20 E-value=8.1e-06 Score=86.82 Aligned_cols=103 Identities=13% Similarity=0.167 Sum_probs=78.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.+.++++|+| +|.+|+.+++.|.+.+ .+|++++|+.++++.+++.+. +......|..+ .+.+.+.++++|+||
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g-~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~diVi 102 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREG-ARVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAIKGADVVF 102 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHHhcCCEEE
Confidence 4568999999 5999999999999864 689999999999988877542 34455667776 778888999999999
Q ss_pred EcCCCccc-HHHHHHHHHcCCeEEEccCChH
Q psy12817 639 SLLPYNLH-HHVAEFCIQHGKNLVTASYLSP 668 (1201)
Q Consensus 639 s~lP~~~h-~~VakacIeaGkh~VD~Syvs~ 668 (1201)
+++|.... ......+.+.++-++|+.|..+
T Consensus 103 ~at~~g~~~~~~~~~~~~~~~vv~D~~~~~~ 133 (194)
T cd01078 103 AAGAAGVELLEKLAWAPKPLAVAADVNAVPP 133 (194)
T ss_pred ECCCCCceechhhhcccCceeEEEEccCCCC
Confidence 99987664 2223333444677999988544
No 50
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.19 E-value=9.4e-06 Score=92.15 Aligned_cols=115 Identities=18% Similarity=0.229 Sum_probs=83.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.+++.|...+ .+|++++|+.+++++... . +...+ + .+.+.++++++|+||+++|
T Consensus 149 l~gk~v~IiG~G~iG~avA~~L~~~G-~~V~v~~R~~~~~~~~~~-~-g~~~~-----~--~~~l~~~l~~aDiVint~P 218 (287)
T TIGR02853 149 IHGSNVMVLGFGRTGMTIARTFSALG-ARVFVGARSSADLARITE-M-GLIPF-----P--LNKLEEKVAEIDIVINTIP 218 (287)
T ss_pred CCCCEEEEEcChHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-C-CCeee-----c--HHHHHHHhccCCEEEECCC
Confidence 34689999999999999999998875 699999999987665442 2 23221 1 3467888899999999999
Q ss_pred Ccc-cHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEecccc
Q psy12817 643 YNL-HHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGL 690 (1201)
Q Consensus 643 ~~~-h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~Gl 690 (1201)
..+ .... -..++.+.-++|++|.+-.+. + +.||+.|+..+..-|+
T Consensus 219 ~~ii~~~~-l~~~k~~aliIDlas~Pg~td-f-~~Ak~~G~~a~~~~gl 264 (287)
T TIGR02853 219 ALVLTADV-LSKLPKHAVIIDLASKPGGTD-F-EYAKKRGIKALLAPGL 264 (287)
T ss_pred hHHhCHHH-HhcCCCCeEEEEeCcCCCCCC-H-HHHHHCCCEEEEeCCC
Confidence 764 2222 234567788999988543332 3 6789999988754443
No 51
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=98.18 E-value=1.2e-05 Score=90.88 Aligned_cols=110 Identities=18% Similarity=0.328 Sum_probs=83.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
++||.|||+|.+|..++..|.+. +++|++.||+.++++++.+. ++.. . +...++++++|+||.|+|..
T Consensus 2 ~~~IgviG~G~mG~~~a~~l~~~-g~~v~~~d~~~~~~~~~~~~--g~~~-----~----~~~~e~~~~~d~vi~~vp~~ 69 (296)
T PRK11559 2 TMKVGFIGLGIMGKPMSKNLLKA-GYSLVVYDRNPEAVAEVIAA--GAET-----A----STAKAVAEQCDVIITMLPNS 69 (296)
T ss_pred CceEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHC--CCee-----c----CCHHHHHhcCCEEEEeCCCH
Confidence 57899999999999999999875 57899999999988876643 2321 1 23556678999999999976
Q ss_pred ccHH-HH------HHHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 645 LHHH-VA------EFCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h~~-Va------kacIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
.+.. +. ..+++.|+.++|.|.+++ ..+++.+.+++.|+.++.
T Consensus 70 ~~~~~v~~~~~~~~~~~~~g~iiid~st~~~~~~~~l~~~~~~~g~~~~d 119 (296)
T PRK11559 70 PHVKEVALGENGIIEGAKPGTVVIDMSSIAPLASREIAAALKAKGIEMLD 119 (296)
T ss_pred HHHHHHHcCcchHhhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 5533 21 234567889999987666 467788888888887754
No 52
>TIGR03855 NAD_NadX aspartate dehydrogenase. Members of this protein family are L-aspartate dehydrogenase, as shown for the NADP-dependent enzyme TM_1643 of Thermotoga maritima. Members lack homology to NadB, the aspartate oxidase (EC 1.4.3.16) of most mesophilic bacteria (described by TIGR00551), which this enzyme replaces in the generation of oxaloacetate from aspartate for the NAD biosynthetic pathway. All members of the seed alignment are found adjacent to other genes of NAD biosynthesis, although other uses of L-aspartate dehydrogenase may occur.
Probab=98.16 E-value=1.3e-05 Score=88.45 Aligned_cols=111 Identities=23% Similarity=0.238 Sum_probs=85.1
Q ss_pred EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-cCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC----C
Q psy12817 592 ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-RSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY----L 666 (1201)
Q Consensus 592 VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy----v 666 (1201)
+.|+|++.++++.+++.+ ++.. +. .+++++ .+.|+|+.|+|...|.+++..|+++|+|+++++. .
T Consensus 5 vaV~D~~~e~a~~~a~~~-g~~~----~~-----d~~eLl~~~vDaVviatp~~~H~e~a~~aL~aGkhVl~~s~gAlad 74 (229)
T TIGR03855 5 AAVYDRNPKDAKELAERC-GAKI----VS-----DFDEFLPEDVDIVVEAASQEAVKEYAEKILKNGKDLLIMSVGALAD 74 (229)
T ss_pred EEEECCCHHHHHHHHHHh-CCce----EC-----CHHHHhcCCCCEEEECCChHHHHHHHHHHHHCCCCEEEECCcccCC
Confidence 568999999999999887 3432 11 344444 4799999999999999999999999999999986 4
Q ss_pred hHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeec
Q psy12817 667 SPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYC 720 (1201)
Q Consensus 667 s~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~c 720 (1201)
.++.++|.+.|++.|..++...|+--|+|.+-+. ..|.++++...+
T Consensus 75 ~e~~~~l~~aA~~~g~~l~i~sGai~g~d~l~a~--------~ig~~~~V~i~~ 120 (229)
T TIGR03855 75 RELRERLREVARSSGRKVYIPSGAIGGLDALKAA--------SLGRIERVVLTT 120 (229)
T ss_pred HHHHHHHHHHHHhcCCEEEEChHHHHHHHHHHhc--------ccCCceEEEEEE
Confidence 4678889999999999999887766665555332 115566665544
No 53
>PRK06349 homoserine dehydrogenase; Provisional
Probab=98.14 E-value=1.2e-05 Score=95.92 Aligned_cols=121 Identities=24% Similarity=0.267 Sum_probs=87.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC---------CCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE---------NIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~---------~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
+.||+|+|+|.||+.+++.|.++. +++ +.|++|+.++++.. ..++.. +.+ ++++++.
T Consensus 3 ~i~VgiiG~G~VG~~~~~~L~~~~~~l~~~~g~~i~l~~V~~~~~~~~~~~--~~~~~~-----~~~----d~~~ll~d~ 71 (426)
T PRK06349 3 PLKVGLLGLGTVGSGVVRILEENAEEIAARAGRPIEIKKVAVRDLEKDRGV--DLPGIL-----LTT----DPEELVNDP 71 (426)
T ss_pred eEEEEEEeeCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEeCChhhccCC--CCcccc-----eeC----CHHHHhhCC
Confidence 479999999999999998886542 355 45789988765421 111111 122 3555554
Q ss_pred CCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEecc---ccCchhHH
Q psy12817 633 SADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEV---GLDPGIDH 696 (1201)
Q Consensus 633 ~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~---GlDPGIdh 696 (1201)
+.|+||.|++. ..|.++++.|+++|+|+|++. ......++|.+.|+++|+.++-+. |.-|-+..
T Consensus 72 ~iDvVve~tg~~~~~~~~~~~aL~~GkhVVtaNK~~~a~~~~eL~~lA~~~gv~l~fEasV~ggiPii~~ 141 (426)
T PRK06349 72 DIDIVVELMGGIEPARELILKALEAGKHVVTANKALLAVHGAELFAAAEEKGVDLYFEAAVAGGIPIIKA 141 (426)
T ss_pred CCCEEEECCCCchHHHHHHHHHHHCCCeEEEcCHHHHHHHHHHHHHHHHHcCCcEEEEEEeeccCchHHH
Confidence 58999999864 567899999999999999985 345567889999999999988764 44455443
No 54
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=98.13 E-value=2.2e-05 Score=87.91 Aligned_cols=125 Identities=22% Similarity=0.268 Sum_probs=97.4
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC--CCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD--ENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~--~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~ 640 (1201)
.+||.|||||.+|+.+++.|.+. .+++ +.|.+|+.+++++++.. +. +. ++++++ ..+.|+||.|
T Consensus 2 ~~rvgiIG~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~~~---~~-----~~----~~l~~ll~~~~DlVVE~ 69 (267)
T PRK13301 2 THRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALAGR---VA-----LL----DGLPGLLAWRPDLVVEA 69 (267)
T ss_pred ceEEEEECccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhhcc---Cc-----cc----CCHHHHhhcCCCEEEEC
Confidence 37999999999999999998764 3366 45678888888887653 22 22 246665 4679999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHH-HHHHHHHHHHcCCEEEeccccCchhHHHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPE-MMALHERAASAGITVLNEVGLDPGIDHLLAME 701 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e-~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~ 701 (1201)
.+...-.+.+..++++|++++..|. ..++ -.+|.+.|++.|-.+..-.|---|+|.+.++.
T Consensus 70 A~~~av~e~~~~iL~~g~dlvv~SvGALaD~~~~~~l~~~A~~~g~~i~ipSGAigGlD~l~aa~ 134 (267)
T PRK13301 70 AGQQAIAEHAEGCLTAGLDMIICSAGALADDALRARLIAAAEAGGARIRVPAGAIAGLDYLQAVA 134 (267)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEChhHhcCHHHHHHHHHHHHhCCCEEEEeChHHHhHHHHHHhh
Confidence 9877678889999999999999984 3333 45688889999999888888878888887764
No 55
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.13 E-value=1e-05 Score=83.86 Aligned_cols=89 Identities=22% Similarity=0.267 Sum_probs=73.5
Q ss_pred EEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCccc
Q psy12817 568 VLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 568 VLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~h 646 (1201)
|+|+| .|++|+.+++.|.+++ ++|++..|++++++. .++++.+..|+.| .+.+.+.++++|+||++++....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~-~~V~~~~R~~~~~~~----~~~~~~~~~d~~d--~~~~~~al~~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG-HEVTALVRSPSKAED----SPGVEIIQGDLFD--PDSVKAALKGADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGHHH----CTTEEEEESCTTC--HHHHHHHHTTSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCC-CEEEEEecCchhccc----ccccccceeeehh--hhhhhhhhhhcchhhhhhhhhcc
Confidence 79999 5999999999999986 899999999998887 4589999999998 88999999999999999964332
Q ss_pred HHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCC
Q psy12817 647 HHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGI 682 (1201)
Q Consensus 647 ~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGV 682 (1201)
. .+.++.+.+.++++|+
T Consensus 74 ~-------------------~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 74 D-------------------VDAAKNIIEAAKKAGV 90 (183)
T ss_dssp H-------------------HHHHHHHHHHHHHTTS
T ss_pred c-------------------cccccccccccccccc
Confidence 0 3445556666666666
No 56
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=98.11 E-value=1.2e-05 Score=91.23 Aligned_cols=91 Identities=20% Similarity=0.323 Sum_probs=70.6
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHH-HHHHHcCCeeEEEeecCCCCchHHHhhc--cCCcEEEEcC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDID-KVTNEFGRVEATLIDVNNGGSDNLSGLV--RSADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe-~La~~~~~v~~v~lDV~D~~~e~L~elI--~~~DVVIs~l 641 (1201)
.||+|||+|.+|+.++..+.+.+++++ .++|+++++.. +.++.+ ++.... +.+++++ .+.|+|+.|+
T Consensus 2 lrVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~-Gi~~~~--------~~~e~ll~~~dIDaV~iaT 72 (285)
T TIGR03215 2 VKVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARAREL-GVKTSA--------EGVDGLLANPDIDIVFDAT 72 (285)
T ss_pred cEEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHC-CCCEEE--------CCHHHHhcCCCCCEEEECC
Confidence 689999999999999888877777884 57898887543 456655 444322 1233333 3689999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccC
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
|...|.+.+..|+++|+|++|++.
T Consensus 73 p~~~H~e~a~~al~aGk~VIdekP 96 (285)
T TIGR03215 73 SAKAHARHARLLAELGKIVIDLTP 96 (285)
T ss_pred CcHHHHHHHHHHHHcCCEEEECCc
Confidence 999999999999999999999963
No 57
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=98.09 E-value=1.2e-05 Score=98.40 Aligned_cols=134 Identities=12% Similarity=0.234 Sum_probs=97.8
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~l 641 (1201)
.+.++++|+|+|.+|++++..|++.+ .+|++++|+.++++.+++.++ ... ++.. .+.+. ..++|+|||++
T Consensus 377 ~~~k~vlIlGaGGagrAia~~L~~~G-~~V~i~nR~~e~a~~la~~l~-~~~--~~~~-----~~~~~~~~~~diiINtT 447 (529)
T PLN02520 377 LAGKLFVVIGAGGAGKALAYGAKEKG-ARVVIANRTYERAKELADAVG-GQA--LTLA-----DLENFHPEEGMILANTT 447 (529)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhC-Cce--eeHh-----HhhhhccccCeEEEecc
Confidence 34589999999999999999999875 499999999999999988763 222 2222 22222 23589999999
Q ss_pred CCcccH-----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEE
Q psy12817 642 PYNLHH-----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESF 716 (1201)
Q Consensus 642 P~~~h~-----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf 716 (1201)
|..+++ ++-...++.+.-++|+.|.+.+ ..|.++|+++|+.++++.+ |+..+.+.+ |
T Consensus 448 ~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~~-T~ll~~A~~~G~~~~~Gl~-------MLv~Qa~~~----------f 509 (529)
T PLN02520 448 SVGMQPNVDETPISKHALKHYSLVFDAVYTPKI-TRLLREAEESGAIIVSGTE-------MFIRQAYEQ----------F 509 (529)
T ss_pred cCCCCCCCCCCcccHhhCCCCCEEEEeccCCCc-CHHHHHHHHCCCeEeCcHH-------HHHHHHHHH----------H
Confidence 877643 2444556777789999998765 4455889999999988655 566665544 4
Q ss_pred EeecCCC
Q psy12817 717 VSYCGGL 723 (1201)
Q Consensus 717 ~s~cGGL 723 (1201)
+.|+|.-
T Consensus 510 ~lwtg~~ 516 (529)
T PLN02520 510 ERFTGLP 516 (529)
T ss_pred HHHhCCC
Confidence 5788753
No 58
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=98.09 E-value=7.4e-06 Score=97.37 Aligned_cols=109 Identities=21% Similarity=0.293 Sum_probs=79.7
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+...++|+|+|+|.+|+.++.+|...+-.+|+|++|+.++++.++..+++..++ . .+.+.+.+.++|+||||+
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~-----~--~~~l~~~l~~aDiVI~aT 250 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAH-----Y--LSELPQLIKKADIIIAAV 250 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEe-----c--HHHHHHHhccCCEEEECc
Confidence 456789999999999999999999876568999999999999999988433322 1 356788899999999999
Q ss_pred CCc---ccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 642 PYN---LHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 642 P~~---~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
+.. +.....+ ....-++|++- +.|.+.+| .|+.+++
T Consensus 251 ~a~~~vi~~~~~~---~~~~~~iDLavPRdidp~v~~l------~~v~l~~ 292 (414)
T PRK13940 251 NVLEYIVTCKYVG---DKPRVFIDISIPQALDPKLGEL------EQNVYYC 292 (414)
T ss_pred CCCCeeECHHHhC---CCCeEEEEeCCCCCCCccccCc------CCeEEEe
Confidence 542 2222211 12235788863 55555555 6777776
No 59
>PLN02712 arogenate dehydrogenase
Probab=98.06 E-value=0.00046 Score=86.83 Aligned_cols=92 Identities=10% Similarity=0.120 Sum_probs=62.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-CCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-SADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-~~DVVIs~l 641 (1201)
.+++||+|||+|.||+.++..|.+. +.+|++++|+... +. +..+ ++.. .. .+.+++. ++|+||.|+
T Consensus 367 ~~~~kIgIIGlG~mG~slA~~L~~~-G~~V~~~dr~~~~-~~-a~~~-Gv~~----~~-----~~~el~~~~aDvVILav 433 (667)
T PLN02712 367 GSKLKIAIVGFGNFGQFLAKTMVKQ-GHTVLAYSRSDYS-DE-AQKL-GVSY----FS-----DADDLCEEHPEVILLCT 433 (667)
T ss_pred CCCCEEEEEecCHHHHHHHHHHHHC-cCEEEEEECChHH-HH-HHHc-CCeE----eC-----CHHHHHhcCCCEEEECC
Confidence 4678999999999999999999875 4789999998643 22 3333 3321 12 2444444 589999999
Q ss_pred CCcccHHHHHHH----HHcCCeEEEccCCh
Q psy12817 642 PYNLHHHVAEFC----IQHGKNLVTASYLS 667 (1201)
Q Consensus 642 P~~~h~~Vakac----IeaGkh~VD~Syvs 667 (1201)
|......+++.. ++.|+-++|.+-+.
T Consensus 434 P~~~~~~vi~~l~~~~lk~g~ivvDv~SvK 463 (667)
T PLN02712 434 SILSTEKVLKSLPFQRLKRSTLFVDVLSVK 463 (667)
T ss_pred ChHHHHHHHHHHHHhcCCCCcEEEECCCcc
Confidence 976555555433 33466788875543
No 60
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.03 E-value=3.2e-05 Score=87.98 Aligned_cols=72 Identities=10% Similarity=0.137 Sum_probs=62.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|||+|+| +|++|+.+++.|.+. +++|++.+|+.+++..+.. .+++.+..|+.| ++.+.++++++|+||++.+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~~l~~--~~v~~v~~Dl~d--~~~l~~al~g~d~Vi~~~~ 73 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE-GYQVRCLVRNLRKASFLKE--WGAELVYGDLSL--PETLPPSFKGVTAIIDAST 73 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcChHHhhhHhh--cCCEEEECCCCC--HHHHHHHHCCCCEEEECCC
Confidence 5899999 699999999999987 5899999999877655442 368899999998 8899999999999999875
No 61
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.02 E-value=3.7e-05 Score=88.15 Aligned_cols=110 Identities=23% Similarity=0.325 Sum_probs=80.3
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.||+.++.+|...+..+|++++|+.+++++++..++ ...+ + .+.+.+.+.++|+||+|+|
T Consensus 176 l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g-~~~~-----~--~~~~~~~l~~aDvVi~at~ 247 (311)
T cd05213 176 LKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG-GNAV-----P--LDELLELLNEADVVISATG 247 (311)
T ss_pred ccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC-CeEE-----e--HHHHHHHHhcCCEEEECCC
Confidence 456899999999999999999988666689999999999999998884 3221 2 3457777889999999998
Q ss_pred CcccHHHHHHHHHc----CCeEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 643 YNLHHHVAEFCIQH----GKNLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~~~h~~VakacIea----Gkh~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
......+.+..++. ++-++|++. +.++..++ .|+.+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~viDlavPrdi~~~v~~l------~~v~l~~ 292 (311)
T cd05213 248 APHYAKIVERAMKKRSGKPRLIVDLAVPRDIEPEVGEL------EGVRLYT 292 (311)
T ss_pred CCchHHHHHHHHhhCCCCCeEEEEeCCCCCCchhhccC------CCcEEEE
Confidence 65544544544433 445888873 44444433 5666665
No 62
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=98.02 E-value=9.9e-06 Score=94.23 Aligned_cols=96 Identities=21% Similarity=0.281 Sum_probs=71.0
Q ss_pred CeEEEEcC-chhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEE-EeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLGA-GYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEAT-LIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILGA-G~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v-~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+||+|+|+ |++|+.+++.|.+++.++++ ++++..+..+.+...++..... ..++.+ .+..++++++|+|+.|+|
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~DvVf~alP 77 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEP---IDEEEIAEDADVVFLALP 77 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeec---CCHHHhhcCCCEEEECCC
Confidence 58999996 99999999999999989977 5565544444455445433221 112221 123444468999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEcc
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~S 664 (1201)
...|.+++..++++|+++||.|
T Consensus 78 ~~~s~~~~~~~~~~G~~VIDlS 99 (346)
T TIGR01850 78 HGVSAELAPELLAAGVKVIDLS 99 (346)
T ss_pred chHHHHHHHHHHhCCCEEEeCC
Confidence 9999999999999999999997
No 63
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=98.01 E-value=3.4e-05 Score=93.42 Aligned_cols=126 Identities=14% Similarity=0.213 Sum_probs=92.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.++++|+|+|.+|++++..|.+.+ .+|++++|+.++++++++.+. ... .+. +.+.+ +.++|+||||+|.
T Consensus 331 ~~k~vlIiGaGgiG~aia~~L~~~G-~~V~i~~R~~~~~~~la~~~~-~~~--~~~-----~~~~~-l~~~DiVInatP~ 400 (477)
T PRK09310 331 NNQHVAIVGAGGAAKAIATTLARAG-AELLIFNRTKAHAEALASRCQ-GKA--FPL-----ESLPE-LHRIDIIINCLPP 400 (477)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhc-cce--ech-----hHhcc-cCCCCEEEEcCCC
Confidence 4579999999999999999999875 599999999999998887652 211 122 22222 4689999999998
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecCC
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGG 722 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cGG 722 (1201)
.+..+ ..+. .-++|+.|.+.... +.+.|+++|+.++++.+ |+..+.+.+. +.|+|.
T Consensus 401 g~~~~---~~l~--~~v~D~~Y~P~~T~-ll~~A~~~G~~~~~G~~-------Ml~~Qa~~~f----------~lw~g~ 456 (477)
T PRK09310 401 SVTIP---KAFP--PCVVDINTLPKHSP-YTQYARSQGSSIIYGYE-------MFAEQALLQF----------RLWFPT 456 (477)
T ss_pred CCcch---hHHh--hhEEeccCCCCCCH-HHHHHHHCcCEEECcHH-------HHHHHHHHHH----------HHHcCC
Confidence 76422 1222 36999999876655 66899999999998665 5666555444 567775
No 64
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=98.01 E-value=3.8e-06 Score=83.88 Aligned_cols=111 Identities=21% Similarity=0.314 Sum_probs=72.7
Q ss_pred CeEEEEcC-chhHHHHHHHHHhCCCCe-EEEEeCCHH-HH-HHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 566 RNVLLLGA-GYVSRPLIEYLHRDENIH-ITLGSLLKE-DI-DKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGA-G~VG~~va~~La~~~~~~-VtVadR~~e-kA-e~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+||+|+|+ |+||+.+++.+.+.++++ +.+++|..+ .. +.+. .+.+....-.-+ .+++++++.++|+||+.+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g-~~~~~~~~~~~v----~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVG-ELAGIGPLGVPV----TDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCH-HHCTSST-SSBE----BS-HHHHTTH-SEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhh-hhhCcCCccccc----chhHHHhcccCCEEEEcC
Confidence 58999998 999999999999988998 456777762 11 1111 111111101111 246788888899999998
Q ss_pred CCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcC
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAG 681 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAG 681 (1201)
-+..-...++.|+++|+++|.-+ |..++++.|.+.+++.+
T Consensus 76 ~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~~~ 117 (124)
T PF01113_consen 76 NPDAVYDNLEYALKHGVPLVIGTTGFSDEQIDELEELAKKIP 117 (124)
T ss_dssp -HHHHHHHHHHHHHHT-EEEEE-SSSHHHHHHHHHHHTTTSE
T ss_pred ChHHhHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHHhccCC
Confidence 43444678899999999988743 55567777877777633
No 65
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=97.99 E-value=2.5e-05 Score=89.06 Aligned_cols=93 Identities=16% Similarity=0.221 Sum_probs=72.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHH-HHHHHHHcCCeeEEEeecCCCCchHHHhhc-----cCCcE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKED-IDKVTNEFGRVEATLIDVNNGGSDNLSGLV-----RSADL 636 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ek-Ae~La~~~~~v~~v~lDV~D~~~e~L~elI-----~~~DV 636 (1201)
++.||+|||+|.+|+.++..+.+.+++++ .++|++++. ..+.++++ ++.... +.+++++ .+.|+
T Consensus 3 ~klrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~-Gi~~~~--------~~ie~LL~~~~~~dIDi 73 (302)
T PRK08300 3 SKLKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRL-GVATSA--------EGIDGLLAMPEFDDIDI 73 (302)
T ss_pred CCCeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHc-CCCccc--------CCHHHHHhCcCCCCCCE
Confidence 35799999999999998888887778884 578998874 33556665 443221 1233343 46999
Q ss_pred EEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 637 VVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 637 VIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
|+.++|...|.+.+..|+++|+|++|.+.
T Consensus 74 Vf~AT~a~~H~e~a~~a~eaGk~VID~sP 102 (302)
T PRK08300 74 VFDATSAGAHVRHAAKLREAGIRAIDLTP 102 (302)
T ss_pred EEECCCHHHHHHHHHHHHHcCCeEEECCc
Confidence 99999999999999999999999999973
No 66
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.98 E-value=1.6e-05 Score=78.79 Aligned_cols=93 Identities=20% Similarity=0.328 Sum_probs=68.8
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
||+|+| +|++|+.+++.|.+++.++ +.+++++.+.-+.+...++ +..-..+.-.+ .+ .++++|+|+.|+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDAD--PE----ELSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETS--GH----HHTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecc--hh----HhhcCCEEEecC
Confidence 799999 8999999999999999998 4566766644455555443 22222221122 22 237899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccC
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
|...+.+++..+++.|+.+||.|.
T Consensus 75 ~~~~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 75 PHGASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp CHHHHHHHHHHHHHTTSEEEESSS
T ss_pred chhHHHHHHHHHhhCCcEEEeCCH
Confidence 999999999999999999999973
No 67
>KOG0409|consensus
Probab=97.97 E-value=4.1e-05 Score=86.31 Aligned_cols=113 Identities=16% Similarity=0.289 Sum_probs=87.5
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+.++++|..||.|.||..++.+|.+. +++|+|.||+.++.+.+++. +++ +.+ .-.++.+++|+||.|+
T Consensus 32 ~~s~~~iGFIGLG~MG~~M~~nLik~-G~kVtV~dr~~~k~~~f~~~--Ga~-----v~~----sPaeVae~sDvvitmv 99 (327)
T KOG0409|consen 32 TPSKTRIGFIGLGNMGSAMVSNLIKA-GYKVTVYDRTKDKCKEFQEA--GAR-----VAN----SPAEVAEDSDVVITMV 99 (327)
T ss_pred CcccceeeEEeeccchHHHHHHHHHc-CCEEEEEeCcHHHHHHHHHh--chh-----hhC----CHHHHHhhcCEEEEEc
Confidence 44689999999999999999999986 68999999999999999875 333 222 3345566899999999
Q ss_pred CCcccHHH-------HHHHHHcCCeE-EEccCChHH-HHHHHHHHHHcCCEEEe
Q psy12817 642 PYNLHHHV-------AEFCIQHGKNL-VTASYLSPE-MMALHERAASAGITVLN 686 (1201)
Q Consensus 642 P~~~h~~V-------akacIeaGkh~-VD~Syvs~e-~~eLde~AkeAGVtil~ 686 (1201)
|..-|..- +-..++.|..+ ||.|.++|. .+++.++++..|..++.
T Consensus 100 ~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vD 153 (327)
T KOG0409|consen 100 PNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVD 153 (327)
T ss_pred CChHhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEe
Confidence 98765331 12334566666 899987776 47899999999888875
No 68
>PRK06141 ornithine cyclodeaminase; Validated
Probab=97.97 E-value=1.7e-05 Score=91.03 Aligned_cols=115 Identities=16% Similarity=0.206 Sum_probs=85.4
Q ss_pred CCCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcCC--eeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFGR--VEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~~--v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..++|+|||+|.+|+.++..+.. .+..+|+|.+|++++++++++++.. .... +. +...+.++++|+|++|
T Consensus 124 ~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~---~~----~~~~~av~~aDIVi~a 196 (314)
T PRK06141 124 DASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAE---VV----TDLEAAVRQADIISCA 196 (314)
T ss_pred CCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceE---Ee----CCHHHHHhcCCEEEEe
Confidence 35799999999999999987765 4556799999999999999987631 1111 11 2456677899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEe
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~ 686 (1201)
+|.. ++-+-...++.|+|+.......+.+++++.+..+.+..++.
T Consensus 197 T~s~-~pvl~~~~l~~g~~i~~ig~~~~~~~El~~~~~~~a~~~vD 241 (314)
T PRK06141 197 TLST-EPLVRGEWLKPGTHLDLVGNFTPDMRECDDEAIRRASVYVD 241 (314)
T ss_pred eCCC-CCEecHHHcCCCCEEEeeCCCCcccccCCHHHHhcCcEEEc
Confidence 9865 33333467899997666665677888888877777766654
No 69
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.97 E-value=4.3e-05 Score=87.17 Aligned_cols=115 Identities=19% Similarity=0.241 Sum_probs=81.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
..+||+|||+|.+|+.++..|.+.+ .+|++++|+.++.+.. ..+ +.+++ + .+.+.+.++++|+||+++|.
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~G-a~V~v~~r~~~~~~~~-~~~-G~~~~-----~--~~~l~~~l~~aDiVI~t~p~ 220 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALG-ANVTVGARKSAHLARI-TEM-GLSPF-----H--LSELAEEVGKIDIIFNTIPA 220 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHH-HHc-CCeee-----c--HHHHHHHhCCCCEEEECCCh
Confidence 4589999999999999999998874 6999999998775543 333 34332 1 34678888999999999986
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEecccc
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGL 690 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~Gl 690 (1201)
.+-..-.-..++.+.-++|++|..-.. ++ +.|++.|++++.-.|+
T Consensus 221 ~~i~~~~l~~~~~g~vIIDla~~pggt-d~-~~a~~~Gv~~~~~~~l 265 (296)
T PRK08306 221 LVLTKEVLSKMPPEALIIDLASKPGGT-DF-EYAEKRGIKALLAPGL 265 (296)
T ss_pred hhhhHHHHHcCCCCcEEEEEccCCCCc-Ce-eehhhCCeEEEEECCC
Confidence 432222233456788899998744322 23 5688899988744443
No 70
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.95 E-value=3.2e-05 Score=83.76 Aligned_cols=91 Identities=14% Similarity=0.211 Sum_probs=71.6
Q ss_pred EEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH--HHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 568 VLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED--IDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 568 VLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek--Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|+|+| +|.+|+.+++.|.+ .+++|++..|+..+ ++++.. .+++.+..|..| .+.|.++++++|+|++++|..
T Consensus 1 I~V~GatG~~G~~v~~~L~~-~~~~V~~l~R~~~~~~~~~l~~--~g~~vv~~d~~~--~~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLS-AGFSVRALVRDPSSDRAQQLQA--LGAEVVEADYDD--PESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTGCEEEEESSSHHHHHHHHHH--TTTEEEES-TT---HHHHHHHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHh-CCCCcEEEEeccchhhhhhhhc--ccceEeecccCC--HHHHHHHHcCCceEEeecCcc
Confidence 79999 69999999999999 57899999998743 455443 368889999988 899999999999999999843
Q ss_pred ------ccHHHHHHHHHcCCeEEEc
Q psy12817 645 ------LHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 645 ------~h~~VakacIeaGkh~VD~ 663 (1201)
.+..++++|.++|+..+-.
T Consensus 76 ~~~~~~~~~~li~Aa~~agVk~~v~ 100 (233)
T PF05368_consen 76 HPSELEQQKNLIDAAKAAGVKHFVP 100 (233)
T ss_dssp CCCHHHHHHHHHHHHHHHT-SEEEE
T ss_pred hhhhhhhhhhHHHhhhccccceEEE
Confidence 2466788888888765544
No 71
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=97.95 E-value=4.9e-05 Score=86.44 Aligned_cols=110 Identities=13% Similarity=0.255 Sum_probs=82.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|+||.|||+|.||.+++..|++. +++|++.||++++++++.+. ++. . .....++++++|+||.|+|..
T Consensus 1 m~~Ig~IGlG~mG~~mA~~l~~~-G~~V~v~d~~~~~~~~~~~~--g~~-----~----~~s~~~~~~~aDvVi~~vp~~ 68 (296)
T PRK15461 1 MAAIAFIGLGQMGSPMASNLLKQ-GHQLQVFDVNPQAVDALVDK--GAT-----P----AASPAQAAAGAEFVITMLPNG 68 (296)
T ss_pred CCeEEEEeeCHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHc--CCc-----c----cCCHHHHHhcCCEEEEecCCH
Confidence 56899999999999999999986 47899999999999887753 222 1 123456778999999999976
Q ss_pred cc-HHHH------HHHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 645 LH-HHVA------EFCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h-~~Va------kacIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
.. ..+. ..+++.|+-++|.|-+++ ..+++.+..++.|+.++.
T Consensus 69 ~~~~~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ld 118 (296)
T PRK15461 69 DLVRSVLFGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMD 118 (296)
T ss_pred HHHHHHHcCcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 42 2222 123456778999987555 567888889999988763
No 72
>PLN00203 glutamyl-tRNA reductase
Probab=97.90 E-value=5.3e-05 Score=92.42 Aligned_cols=113 Identities=21% Similarity=0.241 Sum_probs=83.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||+|.||+.++.+|...+..+|+|++|+.++++.++..++++.....+ .+++.+.+.++|+||+|+|
T Consensus 264 l~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~-----~~dl~~al~~aDVVIsAT~ 338 (519)
T PLN00203 264 HASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKP-----LDEMLACAAEADVVFTSTS 338 (519)
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeec-----HhhHHHHHhcCCEEEEccC
Confidence 45789999999999999999999875457999999999999999887543322222 3456777889999999985
Q ss_pred C---cccHHHHHHHHHc----C--CeEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 643 Y---NLHHHVAEFCIQH----G--KNLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~---~~h~~VakacIea----G--kh~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
. .+..+.++.+.+. + .-+||++. +.+.+.+| .|+.+++
T Consensus 339 s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRdIdp~v~~l------~~v~lyd 388 (519)
T PLN00203 339 SETPLFLKEHVEALPPASDTVGGKRLFVDISVPRNVGACVSEL------ESARVYN 388 (519)
T ss_pred CCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCCCccccccC------CCCeEEE
Confidence 3 3456666665432 1 35889874 56666555 4777776
No 73
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=97.90 E-value=5e-05 Score=88.34 Aligned_cols=96 Identities=17% Similarity=0.197 Sum_probs=73.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeE-------------EEeecCCCCchHHHhh
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEA-------------TLIDVNNGGSDNLSGL 630 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~-------------v~lDV~D~~~e~L~el 630 (1201)
|.||+|+|+|+||+.+++.+.+++++++ .+++++++.+..++..++ ... ..+.+.+ .+.++
T Consensus 1 ~ikVaI~G~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G-~~~~~~~~~~~~~~~~~~i~V~~----~~~el 75 (341)
T PRK04207 1 MIKVGVNGYGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKG-YPLYVADPEREKAFEEAGIPVAG----TIEDL 75 (341)
T ss_pred CeEEEEECCCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcC-CCccccCccccccccCCceEEcC----ChhHh
Confidence 6799999999999999999998888985 467777766666665331 100 0112222 34556
Q ss_pred ccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 631 VRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 631 I~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+.++|+|+.|+|...|.+.++.|+++|+.+|+.+.
T Consensus 76 ~~~vDVVIdaT~~~~~~e~a~~~~~aGk~VI~~~~ 110 (341)
T PRK04207 76 LEKADIVVDATPGGVGAKNKELYEKAGVKAIFQGG 110 (341)
T ss_pred hccCCEEEECCCchhhHHHHHHHHHCCCEEEEcCC
Confidence 67899999999999999999999999999999754
No 74
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.90 E-value=5.6e-05 Score=85.37 Aligned_cols=108 Identities=21% Similarity=0.335 Sum_probs=80.5
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCccc
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~h 646 (1201)
||.|||+|.||..++..|++. +++|++.||++++++++... +... .+...++++++|+||.|+|...+
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~-G~~V~~~dr~~~~~~~~~~~--g~~~---------~~~~~~~~~~aDivi~~vp~~~~ 68 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKA-GYQLHVTTIGPEVADELLAA--GAVT---------AETARQVTEQADVIFTMVPDSPQ 68 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHC--CCcc---------cCCHHHHHhcCCEEEEecCCHHH
Confidence 589999999999999999986 57999999999998887653 2211 12355677899999999997543
Q ss_pred HH-HH---H---HHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 647 HH-VA---E---FCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 647 ~~-Va---k---acIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
.. ++ . ..+..|+.++|.|..++ ..+++.+.+++.|+.++.
T Consensus 69 ~~~v~~~~~~~~~~~~~g~iivd~st~~~~~~~~l~~~l~~~g~~~~~ 116 (291)
T TIGR01505 69 VEEVAFGENGIIEGAKPGKTLVDMSSISPIESKRFAKAVKEKGIDYLD 116 (291)
T ss_pred HHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEe
Confidence 22 22 1 12356788999887555 557788888888988775
No 75
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.90 E-value=0.00014 Score=82.81 Aligned_cols=118 Identities=14% Similarity=0.217 Sum_probs=84.4
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc-
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN- 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~- 644 (1201)
+||+|||+|.||.++++.|.+. +++|++.||++++++++.+. ++.. ..+ .+++.+...++|+|+.|+|..
T Consensus 1 m~Ig~IGlG~MG~~mA~~L~~~-g~~v~v~dr~~~~~~~~~~~--g~~~----~~~--~~e~~~~~~~~dvvi~~v~~~~ 71 (301)
T PRK09599 1 MQLGMIGLGRMGGNMARRLLRG-GHEVVGYDRNPEAVEALAEE--GATG----ADS--LEELVAKLPAPRVVWLMVPAGE 71 (301)
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHC--CCee----cCC--HHHHHhhcCCCCEEEEEecCCc
Confidence 4899999999999999999986 57899999999999887652 3332 112 333333333479999999875
Q ss_pred ccHHHHHH---HHHcCCeEEEccCCh-HHHHHHHHHHHHcCCEEEeccccCch
Q psy12817 645 LHHHVAEF---CIQHGKNLVTASYLS-PEMMALHERAASAGITVLNEVGLDPG 693 (1201)
Q Consensus 645 ~h~~Vaka---cIeaGkh~VD~Syvs-~e~~eLde~AkeAGVtil~e~GlDPG 693 (1201)
....+... .++.|.-+||.+-.+ +..+++.+.+++.|+.++. +.+.-|
T Consensus 72 ~~~~v~~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~~d-apvsG~ 123 (301)
T PRK09599 72 ITDATIDELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGIHFVD-VGTSGG 123 (301)
T ss_pred HHHHHHHHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCCEEEe-CCCCcC
Confidence 33444433 345677799997644 4677788999999999874 554434
No 76
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.87 E-value=9.8e-05 Score=84.09 Aligned_cols=109 Identities=18% Similarity=0.249 Sum_probs=80.3
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC---CcEEEEcCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS---ADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~---~DVVIs~lP 642 (1201)
++|.+||+|.||.++++.|.+. +++|++.||+.++++++.+ . ++.. .+ ..++++++ +|+|+.|+|
T Consensus 1 m~Ig~IGlG~mG~~mA~~L~~~-g~~v~v~dr~~~~~~~~~~-~-g~~~-----~~----s~~~~~~~~~~advVi~~vp 68 (299)
T PRK12490 1 MKLGLIGLGKMGGNMAERLRED-GHEVVGYDVNQEAVDVAGK-L-GITA-----RH----SLEELVSKLEAPRTIWVMVP 68 (299)
T ss_pred CEEEEEcccHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH-C-CCee-----cC----CHHHHHHhCCCCCEEEEEec
Confidence 4799999999999999999886 5789999999999888754 2 3321 12 23444443 799999999
Q ss_pred Cc-ccHHHHHHH---HHcCCeEEEccCC-hHHHHHHHHHHHHcCCEEEe
Q psy12817 643 YN-LHHHVAEFC---IQHGKNLVTASYL-SPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~~-~h~~Vakac---IeaGkh~VD~Syv-s~e~~eLde~AkeAGVtil~ 686 (1201)
.. ....+.... ++.|.-+||.|-+ +...+++.+.+++.|+.++.
T Consensus 69 ~~~~~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vd 117 (299)
T PRK12490 69 AGEVTESVIKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVD 117 (299)
T ss_pred CchHHHHHHHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEe
Confidence 76 334444433 4567789999765 44778888889999988753
No 77
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.87 E-value=0.00011 Score=83.75 Aligned_cols=118 Identities=16% Similarity=0.238 Sum_probs=87.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
|+|.|||+|.||..++..|.+. +++|++.||+.++++++.+. ++.. ..+ .+++.+.++++|+|+.|+|...
T Consensus 1 M~Ig~IGlG~mG~~la~~L~~~-g~~V~~~dr~~~~~~~l~~~--g~~~----~~s--~~~~~~~~~~~dvIi~~vp~~~ 71 (298)
T TIGR00872 1 MQLGLIGLGRMGANIVRRLAKR-GHDCVGYDHDQDAVKAMKED--RTTG----VAN--LRELSQRLSAPRVVWVMVPHGI 71 (298)
T ss_pred CEEEEEcchHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHc--CCcc----cCC--HHHHHhhcCCCCEEEEEcCchH
Confidence 4899999999999999999886 58899999999999988763 2221 123 4556666678999999999875
Q ss_pred cHHHHHHH---HHcCCeEEEccCC-hHHHHHHHHHHHHcCCEEEeccccCch
Q psy12817 646 HHHVAEFC---IQHGKNLVTASYL-SPEMMALHERAASAGITVLNEVGLDPG 693 (1201)
Q Consensus 646 h~~Vakac---IeaGkh~VD~Syv-s~e~~eLde~AkeAGVtil~e~GlDPG 693 (1201)
...+++.. ++.|.-++|.+-. .....++.+.+++.|+.++. +++.-|
T Consensus 72 ~~~v~~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vd-a~vsGg 122 (298)
T TIGR00872 72 VDAVLEELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLD-CGTSGG 122 (298)
T ss_pred HHHHHHHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEe-cCCCCC
Confidence 55555433 4667789998653 35667777788889988754 555444
No 78
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=97.86 E-value=9.6e-05 Score=89.68 Aligned_cols=126 Identities=11% Similarity=0.117 Sum_probs=90.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-C-CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-G-RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~-~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..+.+|.+||.|.||++++..|++. +++|+|.||+.++++++.+.. . ++.. +.+.+ +.+++.+.++++|+||.|
T Consensus 4 ~~~~~IG~IGLG~MG~~mA~nL~~~-G~~V~V~NRt~~k~~~l~~~~~~~Ga~~--~~~a~-s~~e~v~~l~~~dvIi~~ 79 (493)
T PLN02350 4 AALSRIGLAGLAVMGQNLALNIAEK-GFPISVYNRTTSKVDETVERAKKEGNLP--LYGFK-DPEDFVLSIQKPRSVIIL 79 (493)
T ss_pred CCCCCEEEEeeHHHHHHHHHHHHhC-CCeEEEECCCHHHHHHHHHhhhhcCCcc--cccCC-CHHHHHhcCCCCCEEEEE
Confidence 4567899999999999999999986 689999999999999887632 1 2211 11122 133444444469999999
Q ss_pred CCCccc-HHHH---HHHHHcCCeEEEccCCh-HHHHHHHHHHHHcCCEEEeccccCch
Q psy12817 641 LPYNLH-HHVA---EFCIQHGKNLVTASYLS-PEMMALHERAASAGITVLNEVGLDPG 693 (1201)
Q Consensus 641 lP~~~h-~~Va---kacIeaGkh~VD~Syvs-~e~~eLde~AkeAGVtil~e~GlDPG 693 (1201)
+|..-. ..|. ..+++.|.-+||.+-+. +..+++.++++++|+.++ ++++.-|
T Consensus 80 v~~~~aV~~Vi~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fl-dapVSGG 136 (493)
T PLN02350 80 VKAGAPVDQTIKALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYL-GMGVSGG 136 (493)
T ss_pred CCCcHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE-eCCCcCC
Confidence 987543 2232 34457788999998764 577888899999999966 5665544
No 79
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=97.85 E-value=8.4e-05 Score=85.39 Aligned_cols=76 Identities=16% Similarity=0.299 Sum_probs=60.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
||+|+|.| +|++|+.+++.|.+.++++|+..+|+.++...+... ++++++..|+.+ +.+.+.++++++|+||+|..
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~-~~~~~~~~Dl~~-~~~~~~~~~~~~d~ViH~aa 77 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNH-PRMHFFEGDITI-NKEWIEYHVKKCDVILPLVA 77 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccC-CCeEEEeCCCCC-CHHHHHHHHcCCCEEEECcc
Confidence 67999999 599999999999876668899999987655444322 358888999973 26678888899999999864
No 80
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.85 E-value=0.00043 Score=76.15 Aligned_cols=111 Identities=21% Similarity=0.303 Sum_probs=85.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH-HcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTN-EFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~-~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~ 643 (1201)
|+++|+|+|.+|+.+|+.|.+. +..|++.+++.+++++..+ .+ .+..+..|.+| .+.|.++ +.++|+||-++..
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~-g~~Vv~Id~d~~~~~~~~~~~~-~~~~v~gd~t~--~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEE-GHNVVLIDRDEERVEEFLADEL-DTHVVIGDATD--EDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhC-CCceEEEEcCHHHHHHHhhhhc-ceEEEEecCCC--HHHHHhcCCCcCCEEEEeeCC
Confidence 6899999999999999999987 4689999999999988554 44 68889999998 8899888 8899999999986
Q ss_pred c-ccHHHHHHHHH-cCCeEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 644 N-LHHHVAEFCIQ-HGKNLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 644 ~-~h~~VakacIe-aGkh~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
. .+.-++..+.+ .|++.+.+.-.++...+. .++.|+.
T Consensus 77 d~~N~i~~~la~~~~gv~~viar~~~~~~~~~---~~~~g~~ 115 (225)
T COG0569 77 DEVNSVLALLALKEFGVPRVIARARNPEHEKV---LEKLGAD 115 (225)
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEecCHHHHHH---HHHcCCc
Confidence 3 34445555555 788888876544433332 4556743
No 81
>COG4091 Predicted homoserine dehydrogenase [Amino acid transport and metabolism]
Probab=97.84 E-value=0.00031 Score=80.43 Aligned_cols=156 Identities=21% Similarity=0.286 Sum_probs=109.7
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHc--CCeeEEEe---------------ecCCCC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEF--GRVEATLI---------------DVNNGG 623 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~--~~v~~v~l---------------DV~D~~ 623 (1201)
..+..||.+||+|.+|+-++....+-++.+ +.+.+|+...+++..... +..+++.. -++|
T Consensus 14 ~G~PiRVGlIGAG~mG~~ivtQi~~m~Gm~vvaisd~~~~~ak~A~~~ag~~~~~~~e~~~~s~~a~Ai~aGKi~vT~-- 91 (438)
T COG4091 14 EGKPIRVGLIGAGEMGTGIVTQIASMPGMEVVAISDRNLDAAKRAYDRAGGPKIEAVEADDASKMADAIEAGKIAVTD-- 91 (438)
T ss_pred cCCceEEEEecccccchHHHHHHhhcCCceEEEEecccchHHHHHHHHhcCCcccccccchhhHHHHHHhcCcEEEec--
Confidence 356789999999999999999999989998 567899999887765432 22222211 1222
Q ss_pred chHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEccC-----ChHHHHHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 624 SDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTASY-----LSPEMMALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 624 ~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~Sy-----vs~e~~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
...+--.....|+||.++.. .....++-.+|.+|||+|-... +-|-++ +.|.++|++.-.+.|=.|+
T Consensus 92 D~~~i~~~~~IdvIIdATG~p~vGA~~~l~Ai~h~KHlVMmNVEaDvtIGp~Lk---~~Ad~~GviyS~~~GDeP~---- 164 (438)
T COG4091 92 DAELIIANDLIDVIIDATGVPEVGAKIALEAILHGKHLVMMNVEADVTIGPILK---QQADAAGVIYSGGAGDEPS---- 164 (438)
T ss_pred chhhhhcCCcceEEEEcCCCcchhhHhHHHHHhcCCeEEEEEeeeceeecHHHH---HHHhhcCeEEeccCCCCcH----
Confidence 11111112357999999953 4678899999999999987643 444444 5589999999888898898
Q ss_pred HHHHHHHHhhhcCCcEEEEEeecCCCCCCCCCCCcccc
Q psy12817 698 LAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRY 735 (1201)
Q Consensus 698 lA~~~idei~~~ggkV~sf~s~cGGLPaPe~~~nPL~Y 735 (1201)
..|++++=....|-+|.+ || ..-|||++|
T Consensus 165 ~~mEL~efa~a~G~evv~----aG-----KGkNnpl~~ 193 (438)
T COG4091 165 SCMELYEFASALGFEVVS----AG-----KGKNNPLNI 193 (438)
T ss_pred HHHHHHHHHHhcCCeEEe----cc-----CCcCCCCcc
Confidence 457777777777766554 44 224788876
No 82
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=97.82 E-value=3.5e-05 Score=88.96 Aligned_cols=106 Identities=12% Similarity=0.168 Sum_probs=79.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++++|||+|.+|+.+++.|....+ -+|+|.+|+.++++++++.+. +++. .. .+++++.++++|+||+|
T Consensus 129 ~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v---~~----~~~~~~av~~aDiVvta 201 (326)
T TIGR02992 129 SSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDV---TA----ATDPRAAMSGADIIVTT 201 (326)
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceE---EE----eCCHHHHhccCCEEEEe
Confidence 4799999999999999999975334 469999999999999988652 2222 11 23577788899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAA 678 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~Ak 678 (1201)
+|.. .+-+-...++.|.|+.......+.+++++...-
T Consensus 202 T~s~-~p~i~~~~l~~g~~i~~vg~~~p~~rEld~~~l 238 (326)
T TIGR02992 202 TPSE-TPILHAEWLEPGQHVTAMGSDAEHKNEIDPAVI 238 (326)
T ss_pred cCCC-CcEecHHHcCCCcEEEeeCCCCCCceecCHHHH
Confidence 9863 233334678999999988655667777766543
No 83
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.82 E-value=3.4e-05 Score=88.31 Aligned_cols=108 Identities=16% Similarity=0.186 Sum_probs=80.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.++|+|||+|.+|+.+++.+.. .+..+|.|.+|++++++++++++.... ..+.+. +.++++.++|+||+|+|.
T Consensus 125 ~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~-~~~~~~-----~~~~av~~aDiVitaT~s 198 (304)
T PRK07340 125 PGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALG-PTAEPL-----DGEAIPEAVDLVVTATTS 198 (304)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcC-CeeEEC-----CHHHHhhcCCEEEEccCC
Confidence 4799999999999999999975 444579999999999999998773211 111122 356677899999999985
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHc
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASA 680 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeA 680 (1201)
.. ++....++.|+|+..+....+.++|++.+.-+.
T Consensus 199 ~~--Pl~~~~~~~g~hi~~iGs~~p~~~El~~~~~~~ 233 (304)
T PRK07340 199 RT--PVYPEAARAGRLVVAVGAFTPDMAELAPRTVRG 233 (304)
T ss_pred CC--ceeCccCCCCCEEEecCCCCCCcccCCHHHHhh
Confidence 42 333445799999999976667777777654444
No 84
>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway. Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....
Probab=97.81 E-value=2.6e-05 Score=76.45 Aligned_cols=104 Identities=23% Similarity=0.308 Sum_probs=69.9
Q ss_pred cCchhHHHHHHHHHhCC---CCe-EEEEeCC--HHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcCCC
Q psy12817 572 GAGYVSRPLIEYLHRDE---NIH-ITLGSLL--KEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLLPY 643 (1201)
Q Consensus 572 GAG~VG~~va~~La~~~---~~~-VtVadR~--~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~lP~ 643 (1201)
|+|.||+.+++.|.+.. +++ +.|++|+ .... .....++... ...+.+++. +.|+||.|++.
T Consensus 1 G~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~~dvvVE~t~~ 69 (117)
T PF03447_consen 1 GFGNVGRGLLEQLKEQQERIDLEVVGVADRSMLISKD--WAASFPDEAF---------TTDLEELIDDPDIDVVVECTSS 69 (117)
T ss_dssp --SHHHHHHHHHHHHTHHHCEEEEEEEEESSEEEETT--HHHHHTHSCE---------ESSHHHHHTHTT-SEEEE-SSC
T ss_pred CCCHHHHHHHHHHHhCcccCCEEEEEEEECCchhhhh--hhhhcccccc---------cCCHHHHhcCcCCCEEEECCCc
Confidence 89999999999998875 566 5578888 1111 1111112221 123555665 89999999876
Q ss_pred cccHHHHHHHHHcCCeEEEccC--Ch--HHHHHHHHHHHHcCCEEEe
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASY--LS--PEMMALHERAASAGITVLN 686 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Sy--vs--~e~~eLde~AkeAGVtil~ 686 (1201)
..-.+.++.++++|+|+|+.+- .+ ...++|.+.|++.|+.+.-
T Consensus 70 ~~~~~~~~~~L~~G~~VVt~nk~ala~~~~~~~L~~~A~~~g~~~~~ 116 (117)
T PF03447_consen 70 EAVAEYYEKALERGKHVVTANKGALADEALYEELREAARKNGVRIYY 116 (117)
T ss_dssp HHHHHHHHHHHHTTCEEEES-HHHHHSHHHHHHHHHHHHHHT-EEEE
T ss_pred hHHHHHHHHHHHCCCeEEEECHHHhhhHHHHHHHHHHHHHcCCEEEe
Confidence 6667889999999999999962 44 5678899999999998764
No 85
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=97.79 E-value=0.00028 Score=82.98 Aligned_cols=126 Identities=21% Similarity=0.284 Sum_probs=91.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCC-CCeEE-E-EeCCHHHHHHHHHHcCCeeEEE-ee-----------------cCCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDE-NIHIT-L-GSLLKEDIDKVTNEFGRVEATL-ID-----------------VNNG 622 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~-~~~Vt-V-adR~~ekAe~La~~~~~v~~v~-lD-----------------V~D~ 622 (1201)
||||.|+| +|.||+.+++.+.+.+ .++|+ + ++++.+++.++++++. -+.+. .| +..|
T Consensus 1 mk~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~-p~~v~i~~~~~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFR-PKYVVVADEEAAKELKEALAAAGIEVLAG 79 (385)
T ss_pred CceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhC-CCEEEEcCHHHHHHHHHhhccCCceEEEC
Confidence 68999999 8999999999887754 46654 3 3899999999888872 22221 11 1000
Q ss_pred CchHHHhhcc--CCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhH
Q psy12817 623 GSDNLSGLVR--SADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGID 695 (1201)
Q Consensus 623 ~~e~L~elI~--~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGId 695 (1201)
.+.+.+++. ++|+|+++++...|..-..+|+++|++++++. -....-..+.+.|++.|..+++ +|+.-.
T Consensus 80 -~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLANKEslV~aG~~i~~~a~~~g~~i~P---VDSEh~ 152 (385)
T PRK05447 80 -EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALANKESLVCAGELVMDAAKKSGAQILP---VDSEHS 152 (385)
T ss_pred -hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeCHHHHHhhHHHHHHHHHHcCCeEEE---ECHHHH
Confidence 234555554 57999999999889888999999999999973 2224456677789999999887 466533
No 86
>PLN02427 UDP-apiose/xylose synthase
Probab=97.78 E-value=0.00011 Score=85.98 Aligned_cols=78 Identities=21% Similarity=0.426 Sum_probs=64.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH-----cCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE-----FGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~-----~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.+.|||+|.| +|++|+.+++.|.++++.+|++.+|+.++.+.+... .++++.+..|+.| .+.+.++++++|+
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d--~~~l~~~~~~~d~ 89 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKH--DSRLEGLIKMADL 89 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCC--hHHHHHHhhcCCE
Confidence 4568999999 799999999999987667899899887766554321 1358889999998 7889999999999
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
||+|..
T Consensus 90 ViHlAa 95 (386)
T PLN02427 90 TINLAA 95 (386)
T ss_pred EEEccc
Confidence 999984
No 87
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.74 E-value=0.00011 Score=77.89 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=78.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||.||| +|.+|+.+++.+.++ +++||..-|++++.... +++...+.|+.| .+.+.+.+.++|+||++....
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R-GHeVTAivRn~~K~~~~----~~~~i~q~Difd--~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR-GHEVTAIVRNASKLAAR----QGVTILQKDIFD--LTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC-CCeeEEEEeChHhcccc----ccceeecccccC--hhhhHhhhcCCceEEEeccCC
Confidence 6999999 699999999999887 58999999999887643 367889999998 889999999999999998543
Q ss_pred --ccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE---EEeccc---cCch
Q psy12817 645 --LHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGIT---VLNEVG---LDPG 693 (1201)
Q Consensus 645 --~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt---il~e~G---lDPG 693 (1201)
-+.+... ...+.|.+..+.+|++ ++.+.| +|||
T Consensus 74 ~~~~~~~~~----------------k~~~~li~~l~~agv~RllVVGGAGSL~id~g 114 (211)
T COG2910 74 ASDNDELHS----------------KSIEALIEALKGAGVPRLLVVGGAGSLEIDEG 114 (211)
T ss_pred CCChhHHHH----------------HHHHHHHHHHhhcCCeeEEEEcCccceEEcCC
Confidence 2222111 1234455566666654 566666 5555
No 88
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.73 E-value=0.00019 Score=77.59 Aligned_cols=100 Identities=21% Similarity=0.327 Sum_probs=71.7
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC-------------------HHHHHHHHHHc----CCeeEEEe-
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL-------------------KEDIDKVTNEF----GRVEATLI- 617 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~-------------------~ekAe~La~~~----~~v~~v~l- 617 (1201)
.....||+|+|+|.+|..+++.|++.+--+++++|++ ..|++.+++.+ |.++....
T Consensus 18 kl~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 18 RLLNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred HhcCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 3567899999999999999999999876689999987 23454444332 44443322
Q ss_pred -ecCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEcc
Q psy12817 618 -DVNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 618 -DV~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~S 664 (1201)
.+. .+.+.++++++|+||+|+... ....+.+.|.++++.+++.+
T Consensus 98 ~~i~---~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip~i~~~ 143 (202)
T TIGR02356 98 ERVT---AENLELLINNVDLVLDCTDNFATRYLINDACVALGTPLISAA 143 (202)
T ss_pred hcCC---HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 232 356778899999999998532 33456778888888877754
No 89
>PRK08291 ectoine utilization protein EutC; Validated
Probab=97.72 E-value=7.7e-05 Score=86.27 Aligned_cols=105 Identities=12% Similarity=0.159 Sum_probs=77.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++|+|||+|.+|+.++..+.. .+-.+|+|.+|+.++++++++++. +++ +... +++++++.++|+||+|
T Consensus 132 ~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~---v~~~----~d~~~al~~aDiVi~a 204 (330)
T PRK08291 132 ASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP---VTVA----RDVHEAVAGADIIVTT 204 (330)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce---EEEe----CCHHHHHccCCEEEEe
Confidence 4799999999999999999885 343569999999999999988653 222 2222 2467788899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERA 677 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~A 677 (1201)
+|.. .+-+-...++.|+|+.+.....+.+++++...
T Consensus 205 T~s~-~p~i~~~~l~~g~~v~~vg~d~~~~rEld~~~ 240 (330)
T PRK08291 205 TPSE-EPILKAEWLHPGLHVTAMGSDAEHKNEIAPAV 240 (330)
T ss_pred eCCC-CcEecHHHcCCCceEEeeCCCCCCcccCCHHH
Confidence 9864 22222345789999988765556666665544
No 90
>PRK06046 alanine dehydrogenase; Validated
Probab=97.72 E-value=6.2e-05 Score=86.93 Aligned_cols=115 Identities=17% Similarity=0.214 Sum_probs=81.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.++|+|||+|.+|+.+++.+....+++ |.|+||+.++++++++++.......+.+.+ +++++++ +|+|++|+|.
T Consensus 129 ~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~l~-aDiVv~aTps 203 (326)
T PRK06046 129 SKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAE----DIEEACD-CDILVTTTPS 203 (326)
T ss_pred CCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeC----CHHHHhh-CCEEEEecCC
Confidence 479999999999999999998655555 889999999999988776311001112222 3556665 9999999996
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEE
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil 685 (1201)
. .+-+-...++.|+|+..+.-..|.+++++.+.-+..-.++
T Consensus 204 ~-~P~~~~~~l~~g~hV~~iGs~~p~~~El~~~~~~~a~vvv 244 (326)
T PRK06046 204 R-KPVVKAEWIKEGTHINAIGADAPGKQELDPEILLRAKVVV 244 (326)
T ss_pred C-CcEecHHHcCCCCEEEecCCCCCccccCCHHHHhCCcEEE
Confidence 4 2334455679999998887666777787766544443443
No 91
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=97.72 E-value=0.00014 Score=82.34 Aligned_cols=105 Identities=20% Similarity=0.336 Sum_probs=80.5
Q ss_pred EEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCccc-HH
Q psy12817 570 LLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNLH-HH 648 (1201)
Q Consensus 570 ILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~h-~~ 648 (1201)
+||+|.||.+++..|.+. +++|++.||+.++++.+.+. ++. +. ++..++++++|+||.|+|...+ ..
T Consensus 1 ~IGlG~mG~~mA~~L~~~-G~~V~v~dr~~~~~~~l~~~--g~~-----~~----~s~~~~~~~advVil~vp~~~~~~~ 68 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKA-GHPVRVFDLFPDAVEEAVAA--GAQ-----AA----ASPAEAAEGADRVITMLPAGQHVIS 68 (288)
T ss_pred CCcccHhHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHc--CCe-----ec----CCHHHHHhcCCEEEEeCCChHHHHH
Confidence 589999999999999986 57899999999999887653 332 12 2456778899999999997443 33
Q ss_pred HH------HHHHHcCCeEEEccCChHH-HHHHHHHHHHcCCEEEe
Q psy12817 649 VA------EFCIQHGKNLVTASYLSPE-MMALHERAASAGITVLN 686 (1201)
Q Consensus 649 Va------kacIeaGkh~VD~Syvs~e-~~eLde~AkeAGVtil~ 686 (1201)
+. ..+++.|+.++|.|.+++. .+++.+.++++|+.++.
T Consensus 69 v~~g~~~l~~~~~~g~~vid~st~~p~~~~~~~~~~~~~g~~~vd 113 (288)
T TIGR01692 69 VYSGDEGILPKVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMD 113 (288)
T ss_pred HHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 33 2345678889999987664 67888899999998765
No 92
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=97.71 E-value=0.00013 Score=80.19 Aligned_cols=116 Identities=15% Similarity=0.157 Sum_probs=77.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCC--eEEEEeCC----HHHH-------HHHHHHcCCeeEEEeecCCCCchHHHh
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENI--HITLGSLL----KEDI-------DKVTNEFGRVEATLIDVNNGGSDNLSG 629 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~--~VtVadR~----~ekA-------e~La~~~~~v~~v~lDV~D~~~e~L~e 629 (1201)
.+.+||+|+|+|.+|+.++..|.+.+-. +|+++||+ .+++ +.+++.+.. . +. + ..+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~-~----~~-~---~~l~~ 93 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNP-E----KT-G---GTLKE 93 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhcc-C----cc-c---CCHHH
Confidence 4568999999999999999999887555 79999999 4544 444444311 1 11 1 13656
Q ss_pred hccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE-EEecccc
Q psy12817 630 LVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGIT-VLNEVGL 690 (1201)
Q Consensus 630 lI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt-il~e~Gl 690 (1201)
.++++|+||+++|.. +.+.+++... .+.-+++++ .|....+.++|++.|.. +.++.++
T Consensus 94 ~l~~~dvlIgaT~~G~~~~~~l~~m~-~~~ivf~ls--nP~~e~~~~~A~~~ga~i~a~G~~~ 153 (226)
T cd05311 94 ALKGADVFIGVSRPGVVKKEMIKKMA-KDPIVFALA--NPVPEIWPEEAKEAGADIVATGRSD 153 (226)
T ss_pred HHhcCCEEEeCCCCCCCCHHHHHhhC-CCCEEEEeC--CCCCcCCHHHHHHcCCcEEEeCCCC
Confidence 778899999999644 4455555443 344455665 22234577889999995 6665443
No 93
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.71 E-value=0.00032 Score=77.11 Aligned_cols=83 Identities=18% Similarity=0.305 Sum_probs=64.8
Q ss_pred cccccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-cCCcE
Q psy12817 559 DIQTEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-RSADL 636 (1201)
Q Consensus 559 ~~~~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-~~~DV 636 (1201)
+.+...+++|+|+| +|++|+.+++.|++. +++|++..|+.++++.+....+++..+..|+.| ..+.+.+.+ .++|+
T Consensus 11 ~~~~~~~~~ilItGasG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~l~~~~~~~~d~ 88 (251)
T PLN00141 11 DAENVKTKTVFVAGATGRTGKRIVEQLLAK-GFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTE-GSDKLVEAIGDDSDA 88 (251)
T ss_pred ccccccCCeEEEECCCcHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhcccCCceEEEEeeCCC-CHHHHHHHhhcCCCE
Confidence 33456689999999 699999999999886 578998999988876554332358889999987 235676777 68999
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++++.
T Consensus 89 vi~~~g~ 95 (251)
T PLN00141 89 VICATGF 95 (251)
T ss_pred EEECCCC
Confidence 9998764
No 94
>PRK08374 homoserine dehydrogenase; Provisional
Probab=97.65 E-value=0.00044 Score=80.43 Aligned_cols=150 Identities=19% Similarity=0.204 Sum_probs=91.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC-------CC--Ce-EEEEeCC----------HHHHHHHHHHcCCeeEEEeecCCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD-------EN--IH-ITLGSLL----------KEDIDKVTNEFGRVEATLIDVNNGGS 624 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~-------~~--~~-VtVadR~----------~ekAe~La~~~~~v~~v~lDV~D~~~ 624 (1201)
+.+|+|+|+|.||+.+++.|.++ .+ .+ +.|+|++ .+++.+..+....+.....+... ..
T Consensus 2 ~i~VaIiG~GnVG~~~~~~L~~~~~~l~~~~G~~l~VvaV~ds~~~~~~~~Gid~~~l~~~~~~~~~~~~~~~~~~~-~~ 80 (336)
T PRK08374 2 EVKVSIFGFGNVGRAVAEVLAEKSRVFKERYGVELKVVSITDTSGTIWLPEDIDLREAKEVKENFGKLSNWGNDYEV-YN 80 (336)
T ss_pred eeEEEEECCCHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCccccCCCCCChHHHHHhhhccCchhhccccccc-cC
Confidence 47999999999999999988763 23 45 4466654 22333323222111111000000 00
Q ss_pred hHHHhhc--cCCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 625 DNLSGLV--RSADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 625 e~L~elI--~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
-...+++ .++|+||++++...+..+...|++.|+|+|+.+ ..+....+|.+.|+++|+.++-+.++.-|+--+-
T Consensus 81 ~~~~ell~~~~~DVvVd~t~~~~a~~~~~~al~~G~~VVtanK~~la~~~~el~~la~~~~~~~~~ea~v~~GiPii~-- 158 (336)
T PRK08374 81 FSPEEIVEEIDADIVVDVTNDKNAHEWHLEALKEGKSVVTSNKPPIAFHYDELLDLANERNLPYLFEATVMAGTPIIG-- 158 (336)
T ss_pred CCHHHHHhcCCCCEEEECCCcHHHHHHHHHHHhhCCcEEECCHHHHHhCHHHHHHHHHHcCCeEEEeccccccCCchH--
Confidence 1344555 379999999987777889999999999999985 3444456777789999999987766544432221
Q ss_pred HHHHHhhhcCCcEEEEEee
Q psy12817 701 ECIDAAHLNGGKVESFVSY 719 (1201)
Q Consensus 701 ~~idei~~~ggkV~sf~s~ 719 (1201)
.+.+.- .|.+|.+|.-.
T Consensus 159 -~l~~~l-~g~~i~~i~GI 175 (336)
T PRK08374 159 -LLRENL-LGDTVKRIEAV 175 (336)
T ss_pred -HHHhhc-cccceEEEEEE
Confidence 122222 45666666543
No 95
>PRK06392 homoserine dehydrogenase; Provisional
Probab=97.65 E-value=0.00036 Score=80.78 Aligned_cols=117 Identities=16% Similarity=0.222 Sum_probs=73.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhC-------CCCe-EEEEeCCHHH-------HHHHHHHcCCeeEEEeecC--CCCchHHH
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRD-------ENIH-ITLGSLLKED-------IDKVTNEFGRVEATLIDVN--NGGSDNLS 628 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~-------~~~~-VtVadR~~ek-------Ae~La~~~~~v~~v~lDV~--D~~~e~L~ 628 (1201)
+||+|+|+|.||+.+++.|.+. .+++ |.|+|++... .+++.+...+-.....+.. + .+.+.
T Consensus 1 mrVaIiGfG~VG~~va~~L~~~~~~~~~g~~l~VVaVsds~g~l~~~~Gldl~~l~~~~~~g~l~~~~~~~~~--~~~ll 78 (326)
T PRK06392 1 IRISIIGLGNVGLNVLRIIKSRNDDRRNNNGISVVSVSDSKLSYYNERGLDIGKIISYKEKGRLEEIDYEKIK--FDEIF 78 (326)
T ss_pred CEEEEECCCHHHHHHHHHHHhCHHhHhcCCCeEEEEEEECCCcccCCcCCChHHHHHHHhcCccccCCCCcCC--HHHHh
Confidence 4899999999999999999764 2445 4466665321 1222211110000011111 2 23332
Q ss_pred hhccCCcEEEEcCCCcc----cHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEe
Q psy12817 629 GLVRSADLVVSLLPYNL----HHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 629 elI~~~DVVIs~lP~~~----h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~ 686 (1201)
+ .++|+||.|+|... .....+.|+++|+|+|+++ .......+|.+.|+++|+.+..
T Consensus 79 ~--~~~DVvVE~t~~~~~g~~~~~~~~~aL~~G~hVVTaNKgalA~~~~eL~~lA~~~g~~~~~ 140 (326)
T PRK06392 79 E--IKPDVIVDVTPASKDGIREKNLYINAFEHGIDVVTANKSGLANHWHDIMDSASKNRRIIRY 140 (326)
T ss_pred c--CCCCEEEECCCCCCcCchHHHHHHHHHHCCCEEEcCCHHHHHhhHHHHHHHHHHcCCeEEE
Confidence 2 37999999998532 2456699999999999996 3445567788889999988864
No 96
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=97.63 E-value=0.0001 Score=85.16 Aligned_cols=111 Identities=15% Similarity=0.153 Sum_probs=80.4
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD-ENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~-~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.++++|||+|.+|+..++.+... +..+|.|.||+.++++++++++.... +.+.+. ++.+++++++|+|+.|+|.
T Consensus 128 ~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g-~~v~~~----~~~~eav~~aDiVitaT~s 202 (325)
T TIGR02371 128 SSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYE-VPVRAA----TDPREAVEGCDILVTTTPS 202 (325)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhC-CcEEEe----CCHHHHhccCCEEEEecCC
Confidence 47899999999999999888654 33469999999999999887652110 011122 2456778899999999985
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcC
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAG 681 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAG 681 (1201)
. .+-+-...++.|+|+..+....+.+++++...-+..
T Consensus 203 ~-~P~~~~~~l~~g~~v~~vGs~~p~~~Eld~~~l~~a 239 (325)
T TIGR02371 203 R-KPVVKADWVSEGTHINAIGADAPGKQELDPEILKNA 239 (325)
T ss_pred C-CcEecHHHcCCCCEEEecCCCCcccccCCHHHHhcC
Confidence 3 333445678999999988766677788776644443
No 97
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.62 E-value=0.00025 Score=77.75 Aligned_cols=89 Identities=20% Similarity=0.329 Sum_probs=64.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC--CCe-EEEEeC-CHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE--NIH-ITLGSL-LKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~--~~~-VtVadR-~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
++||+|||+|.+|+.++..|.+.+ ..+ +++.+| +.+++++++..+ ++.. .+ +.+++++++|+||.|
T Consensus 4 ~~kI~iIG~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~-----~~----~~~~~~~~~DiViia 73 (245)
T PRK07634 4 KHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARY-NVST-----TT----DWKQHVTSVDTIVLA 73 (245)
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHc-CcEE-----eC----ChHHHHhcCCEEEEe
Confidence 478999999999999999998764 344 777887 578888888766 3332 11 245566789999999
Q ss_pred CCCcccHHHHHHHHH--cCCeEEEc
Q psy12817 641 LPYNLHHHVAEFCIQ--HGKNLVTA 663 (1201)
Q Consensus 641 lP~~~h~~VakacIe--aGkh~VD~ 663 (1201)
+|...|.++++.... .++.+|..
T Consensus 74 vp~~~~~~v~~~l~~~~~~~~vis~ 98 (245)
T PRK07634 74 MPPSAHEELLAELSPLLSNQLVVTV 98 (245)
T ss_pred cCHHHHHHHHHHHHhhccCCEEEEE
Confidence 999888888765432 24445554
No 98
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.62 E-value=0.00042 Score=85.24 Aligned_cols=78 Identities=13% Similarity=0.243 Sum_probs=65.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-------------CCeeEEEeecCCCCchHHH
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-------------GRVEATLIDVNNGGSDNLS 628 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-------------~~v~~v~lDV~D~~~e~L~ 628 (1201)
.+.+.|+|+| +|++|+.+++.|++. +++|++++|+.++++.+...+ .++.++.+|+.| .+.+.
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~-G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD--~esI~ 154 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK--PDQIG 154 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--HHHHH
Confidence 4457899999 699999999999986 578999999999887765422 246788999998 88899
Q ss_pred hhccCCcEEEEcCCC
Q psy12817 629 GLVRSADLVVSLLPY 643 (1201)
Q Consensus 629 elI~~~DVVIs~lP~ 643 (1201)
+.+.++|+||+++..
T Consensus 155 ~aLggiDiVVn~AG~ 169 (576)
T PLN03209 155 PALGNASVVICCIGA 169 (576)
T ss_pred HHhcCCCEEEEcccc
Confidence 999999999999854
No 99
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.61 E-value=0.00017 Score=83.85 Aligned_cols=104 Identities=17% Similarity=0.186 Sum_probs=74.9
Q ss_pred cccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH---------------------HHHHHHHH----HcCCee
Q psy12817 559 DIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK---------------------EDIDKVTN----EFGRVE 613 (1201)
Q Consensus 559 ~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~---------------------ekAe~La~----~~~~v~ 613 (1201)
.++..+.++|+|+|+|.+|..++++|++.+--+++++|++. .|++.+++ ..|+++
T Consensus 18 ~Q~~L~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~ 97 (338)
T PRK12475 18 GQRKIREKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVE 97 (338)
T ss_pred HHHhhcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcE
Confidence 34456678999999999999999999998655899999874 24433332 235443
Q ss_pred --EEEeecCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEccC
Q psy12817 614 --ATLIDVNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 614 --~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~Sy 665 (1201)
++..|++ .+.+.++++++|+||+|+-.. ....+.+.|.+.|+.+|..+.
T Consensus 98 i~~~~~~~~---~~~~~~~~~~~DlVid~~D~~~~r~~in~~~~~~~ip~i~~~~ 149 (338)
T PRK12475 98 IVPVVTDVT---VEELEELVKEVDLIIDATDNFDTRLLINDLSQKYNIPWIYGGC 149 (338)
T ss_pred EEEEeccCC---HHHHHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 4444554 357888999999999999432 234567888888988887643
No 100
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=97.61 E-value=0.00052 Score=78.23 Aligned_cols=108 Identities=18% Similarity=0.300 Sum_probs=78.2
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
+||.+||+|.||.++++.|.+. +++|++.+|++. ++++.+ . ++.. + +...++++++|+||.|+|..-
T Consensus 1 m~Ig~IGlG~MG~~ma~~L~~~-G~~v~v~~~~~~-~~~~~~-~-g~~~----~-----~s~~~~~~~advVi~~v~~~~ 67 (292)
T PRK15059 1 MKLGFIGLGIMGTPMAINLARA-GHQLHVTTIGPV-ADELLS-L-GAVS----V-----ETARQVTEASDIIFIMVPDTP 67 (292)
T ss_pred CeEEEEccCHHHHHHHHHHHHC-CCeEEEEeCCHh-HHHHHH-c-CCee----c-----CCHHHHHhcCCEEEEeCCChH
Confidence 3799999999999999999986 478999999874 555543 2 3321 1 134456679999999999652
Q ss_pred c-HHHH------HHHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 646 H-HHVA------EFCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 646 h-~~Va------kacIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
. ..+. ...+..|+-+||.|.+++ ..+++.+.+++.|+.++.
T Consensus 68 ~v~~v~~~~~g~~~~~~~g~ivvd~sT~~p~~~~~~~~~~~~~G~~~vd 116 (292)
T PRK15059 68 QVEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLD 116 (292)
T ss_pred HHHHHHcCCcchhccCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 2 1221 112356788999987665 467799999999998875
No 101
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.60 E-value=0.00046 Score=79.10 Aligned_cols=77 Identities=19% Similarity=0.264 Sum_probs=63.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHc--CCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEF--GRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~--~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+.++|+|.| +|++|+.+++.|++.+ ..+|++.+|+..+...+...+ +++.++..|+.| .+.+.++++++|+||+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d--~~~l~~~~~~iD~Vih 80 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD--KERLTRALRGVDYVVH 80 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHhcCCEEEE
Confidence 458999999 7999999999999874 468999999877655554443 357788999998 8899999999999999
Q ss_pred cCC
Q psy12817 640 LLP 642 (1201)
Q Consensus 640 ~lP 642 (1201)
+..
T Consensus 81 ~Ag 83 (324)
T TIGR03589 81 AAA 83 (324)
T ss_pred Ccc
Confidence 974
No 102
>PRK07680 late competence protein ComER; Validated
Probab=97.60 E-value=0.00022 Score=79.96 Aligned_cols=90 Identities=12% Similarity=0.185 Sum_probs=66.6
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC---CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN---IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~---~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
++|.|||+|.||..++..|.+.+. .+|++.+|+.++++.+.+.++++.. .+ ...++++++|+||.|+|
T Consensus 1 m~I~iIG~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~-----~~----~~~~~~~~aDiVilav~ 71 (273)
T PRK07680 1 MNIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHV-----AK----TIEEVISQSDLIFICVK 71 (273)
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEE-----EC----CHHHHHHhCCEEEEecC
Confidence 479999999999999999987653 3689999999999888776644432 11 23445678999999998
Q ss_pred CcccHHHHHHH---HHcCCeEEEcc
Q psy12817 643 YNLHHHVAEFC---IQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~Vakac---IeaGkh~VD~S 664 (1201)
.....++++.. +..++.+++++
T Consensus 72 p~~~~~vl~~l~~~l~~~~~iis~~ 96 (273)
T PRK07680 72 PLDIYPLLQKLAPHLTDEHCLVSIT 96 (273)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEEC
Confidence 76666666553 33466777775
No 103
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=97.58 E-value=0.00017 Score=71.18 Aligned_cols=94 Identities=15% Similarity=0.324 Sum_probs=66.1
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHcCCeeEE-EeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEFGRVEAT-LIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~~~v~~v-~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
||+|+| .|.+|+.++..|.+.++++++.+ +++.++.+.+...++.+.-. ..++. .+.+. ..++|+|+.|+|.
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~DvV~~~~~~ 75 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELE---PEDFE--ELAVDIVFLALPH 75 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccc---cCChh--hcCCCEEEEcCCc
Confidence 689999 59999999999999888886544 76665555555555433211 11222 22333 2489999999999
Q ss_pred cccHHH---HHHHHHcCCeEEEccC
Q psy12817 644 NLHHHV---AEFCIQHGKNLVTASY 665 (1201)
Q Consensus 644 ~~h~~V---akacIeaGkh~VD~Sy 665 (1201)
..|.++ +..+++.|+.++|.|.
T Consensus 76 ~~~~~~~~~~~~~~~~g~~viD~s~ 100 (122)
T smart00859 76 GVSKEIAPLLPKAAEAGVKVIDLSS 100 (122)
T ss_pred HHHHHHHHHHHhhhcCCCEEEECCc
Confidence 888775 3455689999999874
No 104
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.58 E-value=0.00037 Score=82.02 Aligned_cols=102 Identities=23% Similarity=0.298 Sum_probs=74.9
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC-------------------HHHHHHHHHHc----CCeeEEEee
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL-------------------KEDIDKVTNEF----GRVEATLID 618 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~-------------------~ekAe~La~~~----~~v~~v~lD 618 (1201)
..+.++|+|+|+|.+|..++.+|++.+--+++++|++ ..|++.+++.+ |.++....+
T Consensus 132 ~l~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 132 RLLEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HHhcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 4567899999999999999999999876679999988 44665555443 554433222
Q ss_pred cCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 619 VNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 619 V~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
..= +.+.+.++++++|+||+|+-. .....+.+.|.+.++.+|..+
T Consensus 212 ~~~-~~~~~~~~~~~~D~Vv~~~d~~~~r~~ln~~~~~~~ip~i~~~ 257 (376)
T PRK08762 212 ERV-TSDNVEALLQDVDVVVDGADNFPTRYLLNDACVKLGKPLVYGA 257 (376)
T ss_pred ccC-ChHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 110 135677888999999999843 334567889999999998864
No 105
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.57 E-value=0.00022 Score=82.94 Aligned_cols=102 Identities=22% Similarity=0.238 Sum_probs=74.1
Q ss_pred cccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH---------------------HHHHHHHHH----cCCe--e
Q psy12817 561 QTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK---------------------EDIDKVTNE----FGRV--E 613 (1201)
Q Consensus 561 ~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~---------------------ekAe~La~~----~~~v--~ 613 (1201)
+..+..||+|+|+|.+|..++.+|++.+--+|+++|.+. .+++.+++. .|.+ +
T Consensus 20 ~~L~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~ 99 (339)
T PRK07688 20 QKLREKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE 99 (339)
T ss_pred HHhcCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence 346678999999999999999999998655899999873 233333222 2443 3
Q ss_pred EEEeecCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEccC
Q psy12817 614 ATLIDVNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 614 ~v~lDV~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~Sy 665 (1201)
....+++ .+.+.++++++|+||+|+-. .....+.+.|.+.++.+|..+.
T Consensus 100 ~~~~~~~---~~~~~~~~~~~DlVid~~Dn~~~r~~ln~~~~~~~iP~i~~~~ 149 (339)
T PRK07688 100 AIVQDVT---AEELEELVTGVDLIIDATDNFETRFIVNDAAQKYGIPWIYGAC 149 (339)
T ss_pred EEeccCC---HHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEee
Confidence 4444544 45678889999999999843 3446678889999998887653
No 106
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.56 E-value=0.00043 Score=82.77 Aligned_cols=94 Identities=26% Similarity=0.312 Sum_probs=70.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.++.+|...+..+|++++|+.++++.++..++ ... . + .+.+.+.+.++|+||+|+|
T Consensus 180 ~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g-~~~--~---~--~~~~~~~l~~aDvVI~aT~ 251 (423)
T PRK00045 180 LSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG-GEA--I---P--LDELPEALAEADIVISSTG 251 (423)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC-CcE--e---e--HHHHHHHhccCCEEEECCC
Confidence 456899999999999999999987654479999999999999998874 222 1 2 3456777889999999997
Q ss_pred Cc---ccHHHHHHHHHc----CCeEEEcc
Q psy12817 643 YN---LHHHVAEFCIQH----GKNLVTAS 664 (1201)
Q Consensus 643 ~~---~h~~VakacIea----Gkh~VD~S 664 (1201)
.. .....++.+++. +.-++|++
T Consensus 252 s~~~~i~~~~l~~~~~~~~~~~~vviDla 280 (423)
T PRK00045 252 APHPIIGKGMVERALKARRHRPLLLVDLA 280 (423)
T ss_pred CCCcEEcHHHHHHHHhhccCCCeEEEEeC
Confidence 43 345555555432 24588886
No 107
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.56 E-value=0.00062 Score=80.44 Aligned_cols=78 Identities=26% Similarity=0.392 Sum_probs=62.9
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHH------HHHHHcCCeeEEEeecCCCCchHHHhhcc--
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDID------KVTNEFGRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe------~La~~~~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
..++++|+|+| +|++|+.+++.|.++ +++|++.+|+.++++ .+....++++.+..|+.| .+.+.++++
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~~~ 133 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRR-GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLFSE 133 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHHHh
Confidence 44578999999 699999999999986 578999999876432 222234578899999998 888998887
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
++|+||+|+.
T Consensus 134 ~~~~D~Vi~~aa 145 (390)
T PLN02657 134 GDPVDVVVSCLA 145 (390)
T ss_pred CCCCcEEEECCc
Confidence 5899999974
No 108
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.54 E-value=0.00035 Score=77.83 Aligned_cols=89 Identities=17% Similarity=0.197 Sum_probs=65.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE--NIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~--~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|++|.|||+|.+|..++..|.+.+ ..+|.+.+|+.++++++...+ ++. +.+ ...+.++++|+||.|+|
T Consensus 2 mm~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~-g~~-----~~~----~~~~~~~~advVil~v~ 71 (267)
T PRK11880 2 MKKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY-GVR-----AAT----DNQEAAQEADVVVLAVK 71 (267)
T ss_pred CCEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc-CCe-----ecC----ChHHHHhcCCEEEEEcC
Confidence 789999999999999999998763 257999999999998887765 332 122 23445678999999998
Q ss_pred CcccHHHHHHHHHc-CCeEEEc
Q psy12817 643 YNLHHHVAEFCIQH-GKNLVTA 663 (1201)
Q Consensus 643 ~~~h~~VakacIea-Gkh~VD~ 663 (1201)
.....++.+.+... ++.+++.
T Consensus 72 ~~~~~~v~~~l~~~~~~~vvs~ 93 (267)
T PRK11880 72 PQVMEEVLSELKGQLDKLVVSI 93 (267)
T ss_pred HHHHHHHHHHHHhhcCCEEEEe
Confidence 77666766655432 4455554
No 109
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00075 Score=71.84 Aligned_cols=75 Identities=16% Similarity=0.251 Sum_probs=63.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc---CCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---SADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---~~DVVIs~ 640 (1201)
||+++|.| +|.+|+.+++.|+++ .+|++.+|+.++++++....+++..+..|+.| .+.+.++++ +.|+||++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT--HTLLLGGRPAERLDELAAELPGATPFPVDLTD--PEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh--CCEEEEeCCHHHHHHHHHHhccceEEecCCCC--HHHHHHHHHhcCCCCEEEEC
Confidence 57999999 699999999999986 78999999998877776555568889999998 888888876 48999999
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 843
No 110
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.52 E-value=0.00023 Score=73.74 Aligned_cols=92 Identities=21% Similarity=0.344 Sum_probs=65.9
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeE-EEeecCCCCchHHHhhccCCcEEEE
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEA-TLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~-v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
||.|+|+|..|.+++..|++++ .+|++.+|+.+.++.+.... ++.+. ..+.++ .++++.++++|+||.
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g-~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t----~dl~~a~~~ad~Iii 75 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNG-HEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT----TDLEEALEDADIIII 75 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCT-EEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE----SSHHHHHTT-SEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcC-CEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc----cCHHHHhCcccEEEe
Confidence 7999999999999999999875 78999999999998887643 22111 012233 357888899999999
Q ss_pred cCCCcccHHHHHHHH---HcCCeEEEc
Q psy12817 640 LLPYNLHHHVAEFCI---QHGKNLVTA 663 (1201)
Q Consensus 640 ~lP~~~h~~VakacI---eaGkh~VD~ 663 (1201)
++|...|..+++... +.++.++..
T Consensus 76 avPs~~~~~~~~~l~~~l~~~~~ii~~ 102 (157)
T PF01210_consen 76 AVPSQAHREVLEQLAPYLKKGQIIISA 102 (157)
T ss_dssp -S-GGGHHHHHHHHTTTSHTT-EEEET
T ss_pred cccHHHHHHHHHHHhhccCCCCEEEEe
Confidence 999999988777653 345555544
No 111
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=97.51 E-value=0.00024 Score=81.90 Aligned_cols=97 Identities=15% Similarity=0.235 Sum_probs=76.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeE---EEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEA---TLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~---v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+|+||.|+| +|+.|.-+++.|..++++++.+++.+..+-+.+.+.+|+.+- ..+..-| .+.+ ...+||+|+-
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~--~~~~--~~~~~DvvFl 76 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTID--PEKI--ELDECDVVFL 76 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCC--hhhh--hcccCCEEEE
Confidence 479999999 799999999999999999988777666556667777776541 1122222 2223 3456999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
|+|.....+++...++.|+.++|+|
T Consensus 77 alPhg~s~~~v~~l~~~g~~VIDLS 101 (349)
T COG0002 77 ALPHGVSAELVPELLEAGCKVIDLS 101 (349)
T ss_pred ecCchhHHHHHHHHHhCCCeEEECC
Confidence 9999888999999999999999997
No 112
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.51 E-value=0.00032 Score=78.01 Aligned_cols=90 Identities=12% Similarity=0.238 Sum_probs=65.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC--CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN--IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~--~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+||+|||+|.||+.+++.|.+.+. ..+.+.+|+.++++++++.++++.. .+ ...++++++|+|+.|+|.
T Consensus 1 m~IgiIG~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~-----~~----~~~~~~~~aDvVilav~p 71 (258)
T PRK06476 1 MKIGFIGTGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRI-----AK----DNQAVVDRSDVVFLAVRP 71 (258)
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceE-----eC----CHHHHHHhCCEEEEEeCH
Confidence 479999999999999999987642 2368899999999998887644332 11 244556789999999986
Q ss_pred cccHHHHHHH-HHcCCeEEEcc
Q psy12817 644 NLHHHVAEFC-IQHGKNLVTAS 664 (1201)
Q Consensus 644 ~~h~~Vakac-IeaGkh~VD~S 664 (1201)
..-.++++.. +..++++|+..
T Consensus 72 ~~~~~vl~~l~~~~~~~vis~~ 93 (258)
T PRK06476 72 QIAEEVLRALRFRPGQTVISVI 93 (258)
T ss_pred HHHHHHHHHhccCCCCEEEEEC
Confidence 5445555432 34677788764
No 113
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.51 E-value=0.00087 Score=80.07 Aligned_cols=110 Identities=20% Similarity=0.320 Sum_probs=78.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.++.+|...+..+|++++|+.+++++++..++. .. ++ .+.+.+.+.++|+||+|++
T Consensus 178 l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~-~~--i~-----~~~l~~~l~~aDvVi~aT~ 249 (417)
T TIGR01035 178 LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG-EA--VK-----FEDLEEYLAEADIVISSTG 249 (417)
T ss_pred ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC-eE--ee-----HHHHHHHHhhCCEEEECCC
Confidence 4568999999999999999999887546899999999999989887732 22 12 3467788889999999986
Q ss_pred Cc---ccHHHHHHHHHcC---CeEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 643 YN---LHHHVAEFCIQHG---KNLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~~---~h~~VakacIeaG---kh~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
.. +....++.+...+ .-++|++. +.+.+.++ .|+.+++
T Consensus 250 s~~~ii~~e~l~~~~~~~~~~~~viDla~Prdid~~v~~l------~~v~l~~ 296 (417)
T TIGR01035 250 APHPIVSKEDVERALRERTRPLFIIDIAVPRDVDPAVARL------EGVFLYD 296 (417)
T ss_pred CCCceEcHHHHHHHHhcCCCCeEEEEeCCCCCCChhhcCc------CCeEEEE
Confidence 43 3455666655432 25778863 44443222 5666554
No 114
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=97.50 E-value=0.00083 Score=81.39 Aligned_cols=122 Identities=14% Similarity=0.194 Sum_probs=87.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhcc---CCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVR---SADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~---~~DVVIs 639 (1201)
|.+|+|||.|.||.+++..|++. +++|++.||+.++++++.+... +.. +...+ .++++++ ++|+|+.
T Consensus 1 ~~~IgvIGLG~MG~~lA~nL~~~-G~~V~v~dr~~~~~~~l~~~~~~~g~~---i~~~~----s~~e~v~~l~~~d~Iil 72 (470)
T PTZ00142 1 MSDIGLIGLAVMGQNLALNIASR-GFKISVYNRTYEKTEEFVKKAKEGNTR---VKGYH----TLEELVNSLKKPRKVIL 72 (470)
T ss_pred CCEEEEEeEhHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhhhhcCCc---ceecC----CHHHHHhcCCCCCEEEE
Confidence 56899999999999999999987 5799999999999998876321 211 11222 3444444 6899999
Q ss_pred cCCCc-ccHHHHH---HHHHcCCeEEEccC-ChHHHHHHHHHHHHcCCEEEeccccCchhH
Q psy12817 640 LLPYN-LHHHVAE---FCIQHGKNLVTASY-LSPEMMALHERAASAGITVLNEVGLDPGID 695 (1201)
Q Consensus 640 ~lP~~-~h~~Vak---acIeaGkh~VD~Sy-vs~e~~eLde~AkeAGVtil~e~GlDPGId 695 (1201)
|+|+. ....+++ ..++.|.-++|.+- ......++.++++++|+.++ ++|+.-|..
T Consensus 73 ~v~~~~~v~~vi~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi~fl-dapVSGG~~ 132 (470)
T PTZ00142 73 LIKAGEAVDETIDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGILYL-GMGVSGGEE 132 (470)
T ss_pred EeCChHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE-cCCCCCCHH
Confidence 98654 3344443 34567888999875 34567777789999999976 577665543
No 115
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.50 E-value=0.001 Score=71.88 Aligned_cols=114 Identities=13% Similarity=0.148 Sum_probs=78.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.+.|+|+|+|.|.||+.+++.|.+. +.+|++.|++.++++++.+.+ +.+. ++ .+++.. .++|+++.|..
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~-G~~Vvv~D~~~~~~~~~~~~~-g~~~--v~-----~~~l~~--~~~Dv~vp~A~ 94 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEE-GAKLIVADINEEAVARAAELF-GATV--VA-----PEEIYS--VDADVFAPCAL 94 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHc-CCEE--Ec-----chhhcc--ccCCEEEeccc
Confidence 4568999999999999999999986 579999999999998888766 3332 22 122222 27999998864
Q ss_pred -CcccHHHHHHHHHcCCeEEEccCChHHH-HHHHHHHHHcCCEEEecccc
Q psy12817 643 -YNLHHHVAEFCIQHGKNLVTASYLSPEM-MALHERAASAGITVLNEVGL 690 (1201)
Q Consensus 643 -~~~h~~VakacIeaGkh~VD~Syvs~e~-~eLde~AkeAGVtil~e~Gl 690 (1201)
...+...++ +.+..+|...-..+-. .+-++..++.|+.++++++.
T Consensus 95 ~~~I~~~~~~---~l~~~~v~~~AN~~~~~~~~~~~L~~~Gi~~~Pd~~~ 141 (200)
T cd01075 95 GGVINDDTIP---QLKAKAIAGAANNQLADPRHGQMLHERGILYAPDYVV 141 (200)
T ss_pred ccccCHHHHH---HcCCCEEEECCcCccCCHhHHHHHHHCCCEEeCceee
Confidence 345555543 3355666654322222 34455678899999997665
No 116
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=97.50 E-value=0.00034 Score=74.77 Aligned_cols=125 Identities=18% Similarity=0.274 Sum_probs=81.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe-----e--------EEEeecCCCCchHHHhhcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV-----E--------ATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v-----~--------~v~lDV~D~~~e~L~elI~ 632 (1201)
|||.|+|.|++|.+++-.|++. +++|+.+|.+.++.+.+.+...-+ . .-.+.++ .+..+.++
T Consensus 1 M~I~ViGlGyvGl~~A~~lA~~-G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t----~~~~~ai~ 75 (185)
T PF03721_consen 1 MKIAVIGLGYVGLPLAAALAEK-GHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRAT----TDIEEAIK 75 (185)
T ss_dssp -EEEEE--STTHHHHHHHHHHT-TSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEE----SEHHHHHH
T ss_pred CEEEEECCCcchHHHHHHHHhC-CCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhh----hhhhhhhh
Confidence 7999999999999999999987 589999999999999887643100 0 0001122 23455677
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHh
Q psy12817 633 SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 633 ~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei 706 (1201)
++|+++.|+|..... ..-.|.+|+...++.+.+.. +.|..++.+.-+-||...=+....+++.
T Consensus 76 ~adv~~I~VpTP~~~----------~~~~Dls~v~~a~~~i~~~l-~~~~lvV~~STvppGtt~~~~~~ile~~ 138 (185)
T PF03721_consen 76 DADVVFICVPTPSDE----------DGSPDLSYVESAIESIAPVL-RPGDLVVIESTVPPGTTEELLKPILEKR 138 (185)
T ss_dssp H-SEEEE----EBET----------TTSBETHHHHHHHHHHHHHH-CSCEEEEESSSSSTTHHHHHHHHHHHHH
T ss_pred ccceEEEecCCCccc----------cCCccHHHHHHHHHHHHHHH-hhcceEEEccEEEEeeehHhhhhhhhhh
Confidence 899999999876542 34567788777777775444 4488889999999998875555555554
No 117
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.49 E-value=0.00084 Score=76.66 Aligned_cols=94 Identities=19% Similarity=0.212 Sum_probs=65.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.++|+|||+|.+|..++..|.+.+. .+|++++|++++++.+.+ . ++.. .+. ....+.++++|+||.|+|.
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~-~-g~~~---~~~----~~~~~~~~~aDvViiavp~ 76 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARE-L-GLGD---RVT----TSAAEAVKGADLVILCVPV 76 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHh-C-CCCc---eec----CCHHHHhcCCCEEEECCCH
Confidence 4799999999999999999987653 479999999988776543 2 2211 011 1345567899999999998
Q ss_pred cccHHHHHH---HHHcCCeEEEccCCh
Q psy12817 644 NLHHHVAEF---CIQHGKNLVTASYLS 667 (1201)
Q Consensus 644 ~~h~~Vaka---cIeaGkh~VD~Syvs 667 (1201)
.....+.+. +++.+..++|.+-+.
T Consensus 77 ~~~~~v~~~l~~~l~~~~iv~dvgs~k 103 (307)
T PRK07502 77 GASGAVAAEIAPHLKPGAIVTDVGSVK 103 (307)
T ss_pred HHHHHHHHHHHhhCCCCCEEEeCccch
Confidence 665555543 345566777765443
No 118
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.48 E-value=0.00097 Score=67.63 Aligned_cols=96 Identities=22% Similarity=0.308 Sum_probs=66.9
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC--------------H-----HHHHHHHHH----cCCeeEEEe--ecCC
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLL--------------K-----EDIDKVTNE----FGRVEATLI--DVNN 621 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~--------------~-----ekAe~La~~----~~~v~~v~l--DV~D 621 (1201)
||+|+|+|.+|..+++.|++.+--+++++|.+ . .|++.+++. .|+++.... ++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~ 80 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE 80 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence 69999999999999999999866679998865 1 133333332 345443333 3332
Q ss_pred CCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEccC
Q psy12817 622 GGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 622 ~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+...+.++++|+||+|... .....+.+.|.+.++++++...
T Consensus 81 ---~~~~~~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~~i~~~~ 122 (143)
T cd01483 81 ---DNLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIPVIDAGG 122 (143)
T ss_pred ---hhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 3346778899999999854 2345677888888888888743
No 119
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.48 E-value=0.00039 Score=75.51 Aligned_cols=91 Identities=16% Similarity=0.154 Sum_probs=66.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
||+++|+|+|.+|..+++.+++. +++|++++|+.+++.+.+...-+.. +. .-+..+..+.+|+|+-++|+.
T Consensus 1 m~~~~i~GtGniG~alA~~~a~a-g~eV~igs~r~~~~~~a~a~~l~~~-----i~---~~~~~dA~~~aDVVvLAVP~~ 71 (211)
T COG2085 1 MMIIAIIGTGNIGSALALRLAKA-GHEVIIGSSRGPKALAAAAAALGPL-----IT---GGSNEDAAALADVVVLAVPFE 71 (211)
T ss_pred CcEEEEeccChHHHHHHHHHHhC-CCeEEEecCCChhHHHHHHHhhccc-----cc---cCChHHHHhcCCEEEEeccHH
Confidence 78999999999999999999986 5899999666655544443321211 11 224566777899999999999
Q ss_pred ccHHHHHHHH--HcCCeEEEcc
Q psy12817 645 LHHHVAEFCI--QHGKNLVTAS 664 (1201)
Q Consensus 645 ~h~~VakacI--eaGkh~VD~S 664 (1201)
..+.+++..- -.||-+||.+
T Consensus 72 a~~~v~~~l~~~~~~KIvID~t 93 (211)
T COG2085 72 AIPDVLAELRDALGGKIVIDAT 93 (211)
T ss_pred HHHhHHHHHHHHhCCeEEEecC
Confidence 8888776554 2368888874
No 120
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.47 E-value=0.00055 Score=68.93 Aligned_cols=97 Identities=22% Similarity=0.292 Sum_probs=67.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHH----HcCCeeE--EEeec
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTN----EFGRVEA--TLIDV 619 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~----~~~~v~~--v~lDV 619 (1201)
.+||+|+|+|.+|..+++.|++.+--+++++|.+. .|++.+++ ..|.++. ...++
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 47999999999999999999998666799887531 13433333 3355443 33334
Q ss_pred CCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 620 NNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 620 ~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
. .+...++++++|+||+|+-. .....+.+.|.+.++++++..
T Consensus 82 ~---~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 82 D---EENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp S---HHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred c---cccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 2 46788888999999999843 334567778888888888764
No 121
>PRK08223 hypothetical protein; Validated
Probab=97.45 E-value=0.00059 Score=77.64 Aligned_cols=104 Identities=18% Similarity=0.157 Sum_probs=73.3
Q ss_pred ccccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-------------------HHHHHHH----HcCCeeE
Q psy12817 558 ADIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-------------------DIDKVTN----EFGRVEA 614 (1201)
Q Consensus 558 ~~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-------------------kAe~La~----~~~~v~~ 614 (1201)
..++..+..+|+|+|+|.+|.+++.+|++.+--+++++|.+.= |++.+++ ..|.++.
T Consensus 20 e~Q~kL~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V 99 (287)
T PRK08223 20 TEQQRLRNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEI 99 (287)
T ss_pred HHHHHHhcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEE
Confidence 3344566799999999999999999999987667888875421 3333322 2254443
Q ss_pred EE--eecCCCCchHHHhhccCCcEEEEcCCCc---ccHHHHHHHHHcCCeEEEcc
Q psy12817 615 TL--IDVNNGGSDNLSGLVRSADLVVSLLPYN---LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 615 v~--lDV~D~~~e~L~elI~~~DVVIs~lP~~---~h~~VakacIeaGkh~VD~S 664 (1201)
.. ..++ .+.+.++++++|+||+|+... ....+.++|.+.++.+|..+
T Consensus 100 ~~~~~~l~---~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~~ 151 (287)
T PRK08223 100 RAFPEGIG---KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRGIPALTAA 151 (287)
T ss_pred EEEecccC---ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 33 3343 356788899999999999652 34667788999999888864
No 122
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.44 E-value=0.00075 Score=77.67 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=64.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC------CeeE-EEeecCCCCchHHHhhccCCcEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG------RVEA-TLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~------~v~~-v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
++||+|||+|.||.+++..|++. +++|++.+|+.++++.+..... +... ..+.. .+++.+.++++|+|
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~-G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~----~~~~~e~~~~aD~V 78 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASK-GVPVRLWARRPEFAAALAAERENREYLPGVALPAELYP----TADPEEALAGADFA 78 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEE----eCCHHHHHcCCCEE
Confidence 57999999999999999999986 5789999999998888775321 1100 00111 12455667899999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 638 VSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 638 Is~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
|.|+|......+.+. ++.++.+++.+
T Consensus 79 i~~v~~~~~~~v~~~-l~~~~~vi~~~ 104 (328)
T PRK14618 79 VVAVPSKALRETLAG-LPRALGYVSCA 104 (328)
T ss_pred EEECchHHHHHHHHh-cCcCCEEEEEe
Confidence 999997754444322 34455555543
No 123
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.43 E-value=0.0023 Score=62.03 Aligned_cols=107 Identities=20% Similarity=0.244 Sum_probs=76.4
Q ss_pred EEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCCcc-
Q psy12817 568 VLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPYNL- 645 (1201)
Q Consensus 568 VLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~~~- 645 (1201)
|+|+|+|.+|+.+++.|.+ .+.+|++++++++.++++... +..++..|.+| .+.++++ ++++|.||.+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~-~~~~vvvid~d~~~~~~~~~~--~~~~i~gd~~~--~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKE-GGIDVVVIDRDPERVEELREE--GVEVIYGDATD--PEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHH-TTSEEEEEESSHHHHHHHHHT--TSEEEES-TTS--HHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHh-CCCEEEEEECCcHHHHHHHhc--ccccccccchh--hhHHhhcCccccCEEEEccCCHHH
Confidence 6899999999999999999 567899999999999988765 47899999998 7777754 678999999998543
Q ss_pred cHHHHHHHHH--cCCeEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 646 HHHVAEFCIQ--HGKNLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 646 h~~VakacIe--aGkh~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
+..++..+-+ ...+++.........+. .++.|+.
T Consensus 76 n~~~~~~~r~~~~~~~ii~~~~~~~~~~~----l~~~g~d 111 (116)
T PF02254_consen 76 NLLIALLARELNPDIRIIARVNDPENAEL----LRQAGAD 111 (116)
T ss_dssp HHHHHHHHHHHTTTSEEEEEESSHHHHHH----HHHTT-S
T ss_pred HHHHHHHHHHHCCCCeEEEEECCHHHHHH----HHHCCcC
Confidence 3444455544 23456655555444333 3556654
No 124
>COG0460 ThrA Homoserine dehydrogenase [Amino acid transport and metabolism]
Probab=97.43 E-value=0.0012 Score=76.30 Aligned_cols=152 Identities=22% Similarity=0.268 Sum_probs=94.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCC---------CCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDE---------NIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS 633 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~---------~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~ 633 (1201)
+..||.|+|.|.||+.+++.|.++. +++ +.|++|+....+.+ ..+++.....|... ..........+
T Consensus 2 ~~v~v~l~G~G~VG~~~~~il~~~~~~l~~~~g~~i~v~~v~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~ 78 (333)
T COG0460 2 KTVKVGLLGLGTVGSGVLEILAEKQEELRKRAGIEIRVVAVADRDGSLVRDL--DLLNAEVWTTDGAL-SLGDEVLLDED 78 (333)
T ss_pred ceEEEEEEccCchhHHHHHHHHHhHHHHHhhcCCceEEEEEEeccchhcccc--cccchhhheecccc-cccHhhhcccc
Confidence 4579999999999999999998752 223 34667776554311 11111112222211 00011122347
Q ss_pred CcEEEEcCCCcc--cH--HHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhh
Q psy12817 634 ADLVVSLLPYNL--HH--HVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAH 707 (1201)
Q Consensus 634 ~DVVIs~lP~~~--h~--~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~ 707 (1201)
+|+|+.++|... .. ...+.++++|+|+||+. ..+..-.+|.+.|+++|+.++-|.-+.-|+==+ +.+++.-
T Consensus 79 ~dvvve~~~~d~~~~~~~~~~~~al~~GkhVVTaNK~~lA~~~~el~~~A~~~g~~l~yEAtV~gGiPiI---~~lr~~l 155 (333)
T COG0460 79 IDVVVELVGGDVEPAEPADLYLKALENGKHVVTANKALLALHYHELREAAEKNGVKLLYEATVGGGIPII---KLLRELL 155 (333)
T ss_pred CCEEEecCcccCCchhhHHHHHHHHHcCCeEECCCchHhHhhHHHHHHHHHHhCCeEEEEeeeccCcchH---HHHHhhc
Confidence 899999997632 23 77899999999999994 466667889999999999998886554443222 1223332
Q ss_pred hcCCcEEEEEeecCC
Q psy12817 708 LNGGKVESFVSYCGG 722 (1201)
Q Consensus 708 ~~ggkV~sf~s~cGG 722 (1201)
. +.+|.+|.-..-|
T Consensus 156 ~-g~~I~~i~GIlNG 169 (333)
T COG0460 156 A-GDEILSIRGILNG 169 (333)
T ss_pred c-cCceEEEEEEEec
Confidence 2 5677777654433
No 125
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.42 E-value=0.00026 Score=83.64 Aligned_cols=97 Identities=19% Similarity=0.281 Sum_probs=69.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHH-hhccCCcEEEEc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLS-GLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~-elI~~~DVVIs~ 640 (1201)
.+++||+|+| +|++|+.+++.|.+++.++|+...++.+.-+.+...++.... .|+.+ .+.++ +.++++|+|+.|
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~--~~~~~--~~~~~~~~~~~~DvVf~A 111 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLIT--QDLPN--LVAVKDADFSDVDAVFCC 111 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccC--ccccc--eecCCHHHhcCCCEEEEc
Confidence 4678999999 699999999999999999988877765544444443432221 12221 11222 124789999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|.....+++.+ ++.|+.+||.|
T Consensus 112 lp~~~s~~i~~~-~~~g~~VIDlS 134 (381)
T PLN02968 112 LPHGTTQEIIKA-LPKDLKIVDLS 134 (381)
T ss_pred CCHHHHHHHHHH-HhCCCEEEEcC
Confidence 998877888887 47899999986
No 126
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.41 E-value=0.00084 Score=79.03 Aligned_cols=74 Identities=19% Similarity=0.307 Sum_probs=60.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...+|+|+|+|.+|+.+++.+.+.+ .+|+++||+.++++.+...+.. .+..+..+ .+.+.+.++++|+||+|++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lG-a~V~v~d~~~~~~~~l~~~~g~--~v~~~~~~--~~~l~~~l~~aDvVI~a~~ 239 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLG-ATVTILDINIDRLRQLDAEFGG--RIHTRYSN--AYEIEDAVKRADLLIGAVL 239 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHhcCc--eeEeccCC--HHHHHHHHccCCEEEEccc
Confidence 4578999999999999999999875 5899999999998888776632 22334444 6778899999999999984
No 127
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.40 E-value=0.0007 Score=75.24 Aligned_cols=102 Identities=18% Similarity=0.257 Sum_probs=70.2
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-------------------HHHHH----HHHcCCeeEEEee
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-------------------DIDKV----TNEFGRVEATLID 618 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-------------------kAe~L----a~~~~~v~~v~lD 618 (1201)
..+..||+|+|+|.+|..++.+|++.+--+++++|.+.- |++.+ .+..|.++....+
T Consensus 21 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~ 100 (240)
T TIGR02355 21 ALKASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN 100 (240)
T ss_pred HHhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 355689999999999999999999987667888876432 33322 2333555543333
Q ss_pred cCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 619 VNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 619 V~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
-.= +.+.+.++++++|+||+|+-. .....+.+.|.+.++++|..+
T Consensus 101 ~~i-~~~~~~~~~~~~DlVvd~~D~~~~r~~ln~~~~~~~ip~v~~~ 146 (240)
T TIGR02355 101 AKL-DDAELAALIAEHDIVVDCTDNVEVRNQLNRQCFAAKVPLVSGA 146 (240)
T ss_pred ccC-CHHHHHHHhhcCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 211 135677888999999999843 234556788888888888754
No 128
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.40 E-value=0.00095 Score=70.65 Aligned_cols=94 Identities=22% Similarity=0.264 Sum_probs=62.0
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH------------------HHHHHHHHH----cCCeeE--EEeecCCC
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK------------------EDIDKVTNE----FGRVEA--TLIDVNNG 622 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~------------------ekAe~La~~----~~~v~~--v~lDV~D~ 622 (1201)
||+|+|+|.+|..++++|++.+--+++++|.+. .|++.+++. .|.++. ....+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-- 78 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-- 78 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC--
Confidence 699999999999999999998655799998875 244433332 244443 333333
Q ss_pred CchHHHhhccCCcEEEEcCCCcc-cHHHHHHHHHc-CCeEEEc
Q psy12817 623 GSDNLSGLVRSADLVVSLLPYNL-HHHVAEFCIQH-GKNLVTA 663 (1201)
Q Consensus 623 ~~e~L~elI~~~DVVIs~lP~~~-h~~VakacIea-Gkh~VD~ 663 (1201)
.+.+.++++++|+||+|+-... ...+...|.+. ++.++..
T Consensus 79 -~~~~~~~l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip~i~~ 120 (174)
T cd01487 79 -ENNLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKPVVCA 120 (174)
T ss_pred -hhhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 3467788899999999974322 23345555555 5555543
No 129
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.37 E-value=0.00072 Score=74.28 Aligned_cols=101 Identities=23% Similarity=0.269 Sum_probs=71.5
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHH----cCCee--EEE
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNE----FGRVE--ATL 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~----~~~v~--~v~ 616 (1201)
..+..||+|+|+|.+|..+++.|++.+--+++++|.+. .|++.+++. .|.++ .+.
T Consensus 18 ~L~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 18 KLKNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HHhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 45678999999999999999999998766788886432 244443333 24443 333
Q ss_pred eecCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEccC
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~Sy 665 (1201)
.+++ .+.+.++++++|+||+|+... ....+.+.|.+.++.+++...
T Consensus 98 ~~i~---~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~ip~i~~g~ 144 (228)
T cd00757 98 ERLD---AENAEELIAGYDLVLDCTDNFATRYLINDACVKLGKPLVSGAV 144 (228)
T ss_pred ceeC---HHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 3332 356778889999999998543 345577888889998888653
No 130
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=97.36 E-value=0.00099 Score=77.02 Aligned_cols=77 Identities=18% Similarity=0.210 Sum_probs=59.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH----HHHHHHH-----cCCeeEEEeecCCCCchHHHhhcc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED----IDKVTNE-----FGRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek----Ae~La~~-----~~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
.++|||+|.| +|++|+.++++|.++ +.+|++.+|.... ...+... ..++..+..|+.| .+.+.++++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d--~~~l~~~~~ 89 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFL-NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK--FTDCQKACK 89 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC--HHHHHHHhh
Confidence 4579999999 799999999999987 4789888875432 1111111 1246778899998 788999999
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
++|+||++..
T Consensus 90 ~~d~ViHlAa 99 (348)
T PRK15181 90 NVDYVLHQAA 99 (348)
T ss_pred CCCEEEECcc
Confidence 9999999974
No 131
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.35 E-value=0.00083 Score=76.47 Aligned_cols=75 Identities=20% Similarity=0.259 Sum_probs=55.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeE---E----EeecCCCCchHHHhhccCCcEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEA---T----LIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~---v----~lDV~D~~~e~L~elI~~~DVV 637 (1201)
|+||+|||+|.||..++..|++. +++|++.+|+.+.++++......... . ...+ ..+..+.++++|+|
T Consensus 1 mmkI~iiG~G~mG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~D~v 75 (325)
T PRK00094 1 MMKIAVLGAGSWGTALAIVLARN-GHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRA----TTDLAEALADADLI 75 (325)
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEE----eCCHHHHHhCCCEE
Confidence 67999999999999999999986 57899999999988887764211000 0 0111 12355567799999
Q ss_pred EEcCCCc
Q psy12817 638 VSLLPYN 644 (1201)
Q Consensus 638 Is~lP~~ 644 (1201)
|.|+|..
T Consensus 76 i~~v~~~ 82 (325)
T PRK00094 76 LVAVPSQ 82 (325)
T ss_pred EEeCCHH
Confidence 9999864
No 132
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.35 E-value=0.00099 Score=79.24 Aligned_cols=122 Identities=20% Similarity=0.325 Sum_probs=78.7
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----Ce--------eEEEeecCCCCchHHHhhcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RV--------EATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v--------~~v~lDV~D~~~e~L~elI~ 632 (1201)
|||.|||+|+||.+++..|++. +++|+++|++.++++.+.+... +. ..-.+.++ .+..++++
T Consensus 1 mkI~vIGlG~~G~~lA~~La~~-G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~----~~~~~~~~ 75 (411)
T TIGR03026 1 MKIAVIGLGYVGLPLAALLADL-GHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRAT----TDYEDAIR 75 (411)
T ss_pred CEEEEECCCchhHHHHHHHHhc-CCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEE----CCHHHHHh
Confidence 4899999999999999999976 5789999999999988765320 00 00001111 23556678
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHH
Q psy12817 633 SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECI 703 (1201)
Q Consensus 633 ~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~i 703 (1201)
++|+||.|+|...+. . .-.|.+++......+.+.. +.|..++...++.||...-++...+
T Consensus 76 ~advvii~vpt~~~~--------~--~~~d~~~v~~~~~~i~~~l-~~g~lvi~~STv~pgt~~~l~~~~~ 135 (411)
T TIGR03026 76 DADVIIICVPTPLKE--------D--GSPDLSYVESAAETIAKHL-RKGATVVLESTVPPGTTEEVVKPIL 135 (411)
T ss_pred hCCEEEEEeCCCCCC--------C--CCcChHHHHHHHHHHHHhc-CCCCEEEEeCcCCCCchHHHHHHHH
Confidence 999999999876541 0 1223344433333432222 4577778888899997655544433
No 133
>PLN02214 cinnamoyl-CoA reductase
Probab=97.35 E-value=0.0013 Score=76.04 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=61.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHH--HHH---HcCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDK--VTN---EFGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~--La~---~~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.++++|+|.| +|++|+.+++.|.++ +++|++.+|+.++... +.. ..+++..+..|+.| .+.+.++++++|+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~d~ 84 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLER-GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD--YEALKAAIDGCDG 84 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCC--hHHHHHHHhcCCE
Confidence 4578999999 599999999999987 5789888888664321 111 11246778899998 8889999999999
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 85 Vih~A~~ 91 (342)
T PLN02214 85 VFHTASP 91 (342)
T ss_pred EEEecCC
Confidence 9999853
No 134
>PLN02858 fructose-bisphosphate aldolase
Probab=97.35 E-value=0.00089 Score=90.19 Aligned_cols=111 Identities=16% Similarity=0.174 Sum_probs=84.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.+||.+||.|.||.+++..|.+. +++|++.||+.++++++++. ++.. .+...++.+++|+||.|+|.
T Consensus 3 ~~~~IGfIGLG~MG~~mA~~L~~~-G~~v~v~dr~~~~~~~l~~~--Ga~~---------~~s~~e~a~~advVi~~l~~ 70 (1378)
T PLN02858 3 SAGVVGFVGLDSLSFELASSLLRS-GFKVQAFEISTPLMEKFCEL--GGHR---------CDSPAEAAKDAAALVVVLSH 70 (1378)
T ss_pred CCCeEEEEchhHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHc--CCee---------cCCHHHHHhcCCEEEEEcCC
Confidence 347899999999999999999986 58999999999999998864 3332 12466777899999999986
Q ss_pred ccc-HHHH------HHHHHcCCeEEEccCChH-HHHHHHHHHHHcC--CEEEe
Q psy12817 644 NLH-HHVA------EFCIQHGKNLVTASYLSP-EMMALHERAASAG--ITVLN 686 (1201)
Q Consensus 644 ~~h-~~Va------kacIeaGkh~VD~Syvs~-e~~eLde~AkeAG--Vtil~ 686 (1201)
.-. ..+. ...++.|.-+||.|.+++ ..+++.+.++++| +.++.
T Consensus 71 ~~~v~~V~~g~~g~~~~l~~g~iivd~STi~p~~~~~la~~l~~~g~~~~~lD 123 (1378)
T PLN02858 71 PDQVDDVFFGDEGAAKGLQKGAVILIRSTILPLQLQKLEKKLTERKEQIFLVD 123 (1378)
T ss_pred hHHHHHHHhchhhHHhcCCCcCEEEECCCCCHHHHHHHHHHHHhcCCceEEEE
Confidence 543 2232 122456888999997665 4678999999999 76553
No 135
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=97.33 E-value=0.0017 Score=78.71 Aligned_cols=123 Identities=10% Similarity=0.167 Sum_probs=87.0
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc-
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL- 645 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~- 645 (1201)
+|.|||.|.||.+++..|++. +++|++.||+.++++++.+.+.....+ ....+ .+++.+.++++|+|+.|+|..-
T Consensus 1 ~IG~IGLG~MG~~mA~nL~~~-G~~V~v~drt~~~~~~l~~~~~~g~~~-~~~~s--~~e~v~~l~~~dvIil~v~~~~~ 76 (467)
T TIGR00873 1 DIGVIGLAVMGSNLALNMADH-GFTVSVYNRTPEKTDEFLAEHAKGKKI-VGAYS--IEEFVQSLERPRKIMLMVKAGAP 76 (467)
T ss_pred CEEEEeeHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHHHhhccCCCCc-eecCC--HHHHHhhcCCCCEEEEECCCcHH
Confidence 489999999999999999987 579999999999999988753111000 11222 4455555568999999998743
Q ss_pred cHHHHH---HHHHcCCeEEEccC-ChHHHHHHHHHHHHcCCEEEeccccCchh
Q psy12817 646 HHHVAE---FCIQHGKNLVTASY-LSPEMMALHERAASAGITVLNEVGLDPGI 694 (1201)
Q Consensus 646 h~~Vak---acIeaGkh~VD~Sy-vs~e~~eLde~AkeAGVtil~e~GlDPGI 694 (1201)
-..++. .+++.|.-++|.+- ......+..++++++|+.++ ++|+.-|.
T Consensus 77 v~~Vi~~l~~~L~~g~iIID~gns~~~~t~~~~~~l~~~gi~fv-dapVsGG~ 128 (467)
T TIGR00873 77 VDAVINQLLPLLEKGDIIIDGGNSHYPDTERRYKELKAKGILFV-GSGVSGGE 128 (467)
T ss_pred HHHHHHHHHhhCCCCCEEEECCCcCHHHHHHHHHHHHhcCCEEE-cCCCCCCH
Confidence 234433 33567888999975 44566666778889999865 56665554
No 136
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.33 E-value=0.0011 Score=77.60 Aligned_cols=100 Identities=21% Similarity=0.134 Sum_probs=72.1
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHH----HcCCeeEE--E
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTN----EFGRVEAT--L 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~----~~~~v~~v--~ 616 (1201)
..+..+|+|+|+|.+|..++.+|++.+--+++++|.+. .|++.+++ ..|.++.. .
T Consensus 25 ~L~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 25 SLFDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 35678999999999999999999998766789888764 24443333 33554433 2
Q ss_pred eecCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEcc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~S 664 (1201)
..++ .+...++++++|+||+|+-.. ....+.++|.+.++.+|..+
T Consensus 105 ~~i~---~~~~~~~~~~~DvVvd~~d~~~~r~~~n~~c~~~~ip~v~~~ 150 (355)
T PRK05597 105 RRLT---WSNALDELRDADVILDGSDNFDTRHLASWAAARLGIPHVWAS 150 (355)
T ss_pred eecC---HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 3333 356677889999999998543 22456788999999988864
No 137
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.33 E-value=0.0014 Score=71.58 Aligned_cols=98 Identities=22% Similarity=0.285 Sum_probs=67.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH------------------HHHHHHHHH----cCCeeE--EEee
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK------------------EDIDKVTNE----FGRVEA--TLID 618 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~------------------ekAe~La~~----~~~v~~--v~lD 618 (1201)
.+..+|+|+|+|.+|..++++|++.+--+++++|.+. .|++.+++. .|.++. +...
T Consensus 26 L~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~ 105 (212)
T PRK08644 26 LKKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEK 105 (212)
T ss_pred HhCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeee
Confidence 5678999999999999999999998666799998872 244443332 244433 3333
Q ss_pred cCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHc-CCeEEEc
Q psy12817 619 VNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQH-GKNLVTA 663 (1201)
Q Consensus 619 V~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIea-Gkh~VD~ 663 (1201)
++ .+.+.++++++|+||+|+-.. ....+...|.+. ++.++..
T Consensus 106 i~---~~~~~~~~~~~DvVI~a~D~~~~r~~l~~~~~~~~~~p~I~~ 149 (212)
T PRK08644 106 ID---EDNIEELFKDCDIVVEAFDNAETKAMLVETVLEHPGKKLVAA 149 (212)
T ss_pred cC---HHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 43 345677889999999997432 224456777777 7777764
No 138
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.32 E-value=0.00085 Score=75.81 Aligned_cols=91 Identities=18% Similarity=0.233 Sum_probs=64.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC---CeEEEEeCCH-HHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN---IHITLGSLLK-EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~---~~VtVadR~~-ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
|+||+|||+|.+|..++..|.+.+. .+|.+.+|+. ++++.+...++.+.. .+ +..++++++|+||.|
T Consensus 1 m~~I~iIG~G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~-----~~----~~~e~~~~aDvVila 71 (277)
T PRK06928 1 MEKIGFIGYGSMADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVEL-----AD----NEAEIFTKCDHSFIC 71 (277)
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEE-----eC----CHHHHHhhCCEEEEe
Confidence 6799999999999999999987642 5688888864 455666555433221 11 234556789999999
Q ss_pred CCCcccHHHHHHH---HHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFC---IQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~Vakac---IeaGkh~VD~S 664 (1201)
+|.....++++.+ +..++++|...
T Consensus 72 vpp~~~~~vl~~l~~~l~~~~~ivS~~ 98 (277)
T PRK06928 72 VPPLAVLPLLKDCAPVLTPDRHVVSIA 98 (277)
T ss_pred cCHHHHHHHHHHHHhhcCCCCEEEEEC
Confidence 9987777776654 44577777763
No 139
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=97.32 E-value=0.0004 Score=79.55 Aligned_cols=107 Identities=16% Similarity=0.162 Sum_probs=79.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++++|||+|..|+..++.+..-..+ +|.|.+|++++++++++++. +++.. + .++.++++.++|+|+.|
T Consensus 117 a~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~---~----~~~~~eav~~aDIV~ta 189 (301)
T PRK06407 117 VENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIR---P----VDNAEAALRDADTITSI 189 (301)
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEE---E----eCCHHHHHhcCCEEEEe
Confidence 47999999999999999988764344 59999999999999987763 22221 1 13578888999999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAAS 679 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~Ake 679 (1201)
+|.. ++-+-...++.|.|+.-+.-..+.+++++...-+
T Consensus 190 T~s~-~P~~~~~~l~pg~hV~aiGs~~p~~~El~~~~l~ 227 (301)
T PRK06407 190 TNSD-TPIFNRKYLGDEYHVNLAGSNYPNRREAEHSVLN 227 (301)
T ss_pred cCCC-CcEecHHHcCCCceEEecCCCCCCcccCCHHHHH
Confidence 9854 3333345678999988886555677777765433
No 140
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.32 E-value=0.00086 Score=75.78 Aligned_cols=89 Identities=16% Similarity=0.259 Sum_probs=63.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC---CCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE---NIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~---~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+||++||+|.||.+++..|.+.+ ..+|++.+|+.++++.+.+.+ ++.. .. ...++++++|+||-|+
T Consensus 2 ~~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~-g~~~----~~-----~~~e~~~~aDiIiLav 71 (272)
T PRK12491 2 NKQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKY-GITI----TT-----NNNEVANSADILILSI 71 (272)
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhc-CcEE----eC-----CcHHHHhhCCEEEEEe
Confidence 358999999999999999998764 236999999999998887666 3432 11 2334567899999999
Q ss_pred CCcccHHHHHHH---HHcCCeEEEc
Q psy12817 642 PYNLHHHVAEFC---IQHGKNLVTA 663 (1201)
Q Consensus 642 P~~~h~~Vakac---IeaGkh~VD~ 663 (1201)
|+..-..+++.. ++.++.++++
T Consensus 72 kP~~~~~vl~~l~~~~~~~~lvISi 96 (272)
T PRK12491 72 KPDLYSSVINQIKDQIKNDVIVVTI 96 (272)
T ss_pred ChHHHHHHHHHHHHhhcCCcEEEEe
Confidence 865444544432 3344556665
No 141
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.32 E-value=0.00095 Score=74.38 Aligned_cols=102 Identities=19% Similarity=0.282 Sum_probs=69.8
Q ss_pred ccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHH----HHcCCeeEEE
Q psy12817 560 IQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVT----NEFGRVEATL 616 (1201)
Q Consensus 560 ~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La----~~~~~v~~v~ 616 (1201)
++..+..||+|+|+|.+|..++++|++.+--+++++|.+. .|++.++ +..|.++...
T Consensus 27 Q~~L~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~ 106 (245)
T PRK05690 27 QEKLKAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET 106 (245)
T ss_pred HHHhcCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence 3346678999999999999999999998766788887542 1333322 2235444333
Q ss_pred ee--cCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 617 ID--VNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lD--V~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
.+ +. .+.+.++++++|+||+|+-. .....+.+.|.++++.+|..+
T Consensus 107 ~~~~i~---~~~~~~~~~~~DiVi~~~D~~~~r~~ln~~~~~~~ip~v~~~ 154 (245)
T PRK05690 107 INARLD---DDELAALIAGHDLVLDCTDNVATRNQLNRACFAAKKPLVSGA 154 (245)
T ss_pred EeccCC---HHHHHHHHhcCCEEEecCCCHHHHHHHHHHHHHhCCEEEEee
Confidence 22 22 34567788999999999843 233456778888888888754
No 142
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=97.30 E-value=0.001 Score=83.72 Aligned_cols=77 Identities=22% Similarity=0.357 Sum_probs=61.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchH-HHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDN-LSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~-L~elI~~~DVVIs~ 640 (1201)
..+|||+|.| +|++|+.+++.|.+..+++|++.+|.......+.. .++++.+..|+.| .+. +.++++++|+||+|
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~-~~~~~~~~gDl~d--~~~~l~~~l~~~D~ViHl 389 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG-HPRFHFVEGDISI--HSEWIEYHIKKCDVVLPL 389 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC-CCceEEEeccccC--cHHHHHHHhcCCCEEEEC
Confidence 5689999999 79999999999998767899999998765443322 2357888899987 444 67788899999998
Q ss_pred CC
Q psy12817 641 LP 642 (1201)
Q Consensus 641 lP 642 (1201)
..
T Consensus 390 Aa 391 (660)
T PRK08125 390 VA 391 (660)
T ss_pred cc
Confidence 63
No 143
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0008 Score=73.73 Aligned_cols=76 Identities=11% Similarity=0.195 Sum_probs=63.4
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhcc--------C
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVR--------S 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~--------~ 633 (1201)
||+++|.| +|.+|+.+++.|++. +.+|++.+|+.+.++++....+ ++..+.+|+.| .+++.++++ +
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE-GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGR 77 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 68899999 799999999999987 5789999999999888877653 57788999998 777777655 3
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 78 id~vi~~ag~ 87 (260)
T PRK08267 78 LDVLFNNAGI 87 (260)
T ss_pred CCEEEECCCC
Confidence 5999999853
No 144
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=97.30 E-value=0.00091 Score=78.81 Aligned_cols=103 Identities=20% Similarity=0.188 Sum_probs=74.2
Q ss_pred cccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC-------------------HHHHHHHHHH----cCCee--
Q psy12817 559 DIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL-------------------KEDIDKVTNE----FGRVE-- 613 (1201)
Q Consensus 559 ~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~-------------------~ekAe~La~~----~~~v~-- 613 (1201)
.++..+..+|+|+|+|.+|..++.+|++.+--+++++|.+ ..|++.+++. .|+++
T Consensus 35 ~q~~l~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~ 114 (370)
T PRK05600 35 QQERLHNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVN 114 (370)
T ss_pred HHHHhcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeE
Confidence 3345667899999999999999999999876689988876 2344444433 25443
Q ss_pred EEEeecCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 614 ATLIDVNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 614 ~v~lDV~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
+....++ .+.+.++++++|+||+|+-. .....+.+.|.+.++.+|..+
T Consensus 115 ~~~~~i~---~~~~~~~~~~~DlVid~~Dn~~~r~~in~~~~~~~iP~v~~~ 163 (370)
T PRK05600 115 ALRERLT---AENAVELLNGVDLVLDGSDSFATKFLVADAAEITGTPLVWGT 163 (370)
T ss_pred EeeeecC---HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 3333333 35677889999999999854 333556788999999988864
No 145
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=97.28 E-value=0.0027 Score=69.65 Aligned_cols=147 Identities=18% Similarity=0.192 Sum_probs=93.2
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH----------HHHHHHHHHcCCeeEE-EeecCCCCchHHHhh
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK----------EDIDKVTNEFGRVEAT-LIDVNNGGSDNLSGL 630 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~----------ekAe~La~~~~~v~~v-~lDV~D~~~e~L~el 630 (1201)
+.+.++|+|.|.|.||+.+++.|.+.+...|.|.|.+. +..+...... ++... ..|..+ .+.+-..
T Consensus 20 ~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~-~~~~~~~~~~~~--~~~l~~~ 96 (217)
T cd05211 20 SLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG-GSARVKVQDYFP--GEAILGL 96 (217)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC-CccccCcccccC--cccceec
Confidence 35679999999999999999999998655688888877 5555443332 22211 112222 2344332
Q ss_pred ccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHh
Q psy12817 631 VRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 631 I~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei 706 (1201)
++|++|-|.+. ..+...++ +.++.+|...- .+++ -++.-+++|+.+++ |.+
T Consensus 97 --~~DVlipaA~~~~i~~~~a~---~l~a~~V~e~AN~p~t~~---a~~~L~~~Gi~v~P-----------------d~~ 151 (217)
T cd05211 97 --DVDIFAPCALGNVIDLENAK---KLKAKVVAEGANNPTTDE---ALRILHERGIVVAP-----------------DIV 151 (217)
T ss_pred --cccEEeeccccCccChhhHh---hcCccEEEeCCCCCCCHH---HHHHHHHCCcEEEC-----------------hHH
Confidence 89999999853 44544443 45677887653 4443 34456888999987 223
Q ss_pred hhcCCcEEEEEeecCCCCCCCCCCCccccccccChHHHHHH
Q psy12817 707 HLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLN 747 (1201)
Q Consensus 707 ~~~ggkV~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a 747 (1201)
-..||-+.++.-|.+... .+.|+.+.+...
T Consensus 152 ~NaGGvi~s~~E~~q~~~-----------~~~w~~~~v~~~ 181 (217)
T cd05211 152 ANAGGVIVSYFEWVQNLQ-----------RLSWDAEEVRSK 181 (217)
T ss_pred hcCCCeEeEHHHhcCCcc-----------ccCCCHHHHHHH
Confidence 335677776666665442 257888766533
No 146
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.27 E-value=0.0019 Score=68.37 Aligned_cols=96 Identities=10% Similarity=0.156 Sum_probs=69.3
Q ss_pred CccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccc
Q psy12817 191 KSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLY 270 (1201)
Q Consensus 191 ~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y 270 (1201)
.++.-.+|.|+|.|++|+...+.++.+| .+|.+|+........... .+-.+.
T Consensus 32 ~~l~g~tvgIiG~G~IG~~vA~~l~~fG----------------~~V~~~d~~~~~~~~~~~-~~~~~~----------- 83 (178)
T PF02826_consen 32 RELRGKTVGIIGYGRIGRAVARRLKAFG----------------MRVIGYDRSPKPEEGADE-FGVEYV----------- 83 (178)
T ss_dssp S-STTSEEEEESTSHHHHHHHHHHHHTT-----------------EEEEEESSCHHHHHHHH-TTEEES-----------
T ss_pred cccCCCEEEEEEEcCCcCeEeeeeecCC----------------ceeEEecccCChhhhccc-ccceee-----------
Confidence 4677899999999999999999999999 446667655444331111 121111
Q ss_pred cchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 271 RSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 271 ~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
.+ +++++.+|+|+++.--.+.+-.+|+++.++. ||+| ++++.++
T Consensus 84 --~l-~ell~~aDiv~~~~plt~~T~~li~~~~l~~-mk~g------------------a~lvN~a 127 (178)
T PF02826_consen 84 --SL-DELLAQADIVSLHLPLTPETRGLINAEFLAK-MKPG------------------AVLVNVA 127 (178)
T ss_dssp --SH-HHHHHH-SEEEE-SSSSTTTTTSBSHHHHHT-STTT------------------EEEEESS
T ss_pred --eh-hhhcchhhhhhhhhccccccceeeeeeeeec-cccc------------------eEEEecc
Confidence 11 2467789999999988778889999999999 9999 8999876
No 147
>PLN02858 fructose-bisphosphate aldolase
Probab=97.27 E-value=0.0014 Score=88.35 Aligned_cols=111 Identities=16% Similarity=0.275 Sum_probs=84.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.+++|.+||.|.||.+++..|++. +++|++.||+.++++++... ++.. + +...++++++|+||.|+|.
T Consensus 323 ~~~~IGfIGlG~MG~~mA~~L~~~-G~~V~v~dr~~~~~~~l~~~--Ga~~----~-----~s~~e~~~~aDvVi~~V~~ 390 (1378)
T PLN02858 323 PVKRIGFIGLGAMGFGMASHLLKS-NFSVCGYDVYKPTLVRFENA--GGLA----G-----NSPAEVAKDVDVLVIMVAN 390 (1378)
T ss_pred CCCeEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--CCee----c-----CCHHHHHhcCCEEEEecCC
Confidence 468999999999999999999986 57999999999999887754 2221 1 1345677899999999985
Q ss_pred ccc-HHHH------HHHHHcCCeEEEccCChHH-HHHHHHHHHH--cCCEEEe
Q psy12817 644 NLH-HHVA------EFCIQHGKNLVTASYLSPE-MMALHERAAS--AGITVLN 686 (1201)
Q Consensus 644 ~~h-~~Va------kacIeaGkh~VD~Syvs~e-~~eLde~Ake--AGVtil~ 686 (1201)
... ..++ ...++.|.-+||.|.+++. .+++.+.+++ .|+.++.
T Consensus 391 ~~~v~~Vl~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lD 443 (1378)
T PLN02858 391 EVQAENVLFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVD 443 (1378)
T ss_pred hHHHHHHHhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEE
Confidence 432 2332 1224678899999987665 5778888888 8888764
No 148
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.26 E-value=0.0016 Score=77.57 Aligned_cols=90 Identities=19% Similarity=0.289 Sum_probs=71.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~~ 644 (1201)
|+|+|+|+|.+|+.+++.|.+. +.+|++.++++++++.+.... ++..+..|.++ .+.+.++ ++++|.||.+++..
T Consensus 1 m~viIiG~G~ig~~~a~~L~~~-g~~v~vid~~~~~~~~~~~~~-~~~~~~gd~~~--~~~l~~~~~~~a~~vi~~~~~~ 76 (453)
T PRK09496 1 MKIIIVGAGQVGYTLAENLSGE-NNDVTVIDTDEERLRRLQDRL-DVRTVVGNGSS--PDVLREAGAEDADLLIAVTDSD 76 (453)
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHhhc-CEEEEEeCCCC--HHHHHHcCCCcCCEEEEecCCh
Confidence 5899999999999999999876 578999999999988876533 57888899987 7788887 88999999999864
Q ss_pred c-cHHHHHHHHHc-CCe
Q psy12817 645 L-HHHVAEFCIQH-GKN 659 (1201)
Q Consensus 645 ~-h~~VakacIea-Gkh 659 (1201)
. +..++..|-+. +..
T Consensus 77 ~~n~~~~~~~r~~~~~~ 93 (453)
T PRK09496 77 ETNMVACQIAKSLFGAP 93 (453)
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 3 34455555554 443
No 149
>PRK07589 ornithine cyclodeaminase; Validated
Probab=97.26 E-value=0.00045 Score=80.66 Aligned_cols=108 Identities=15% Similarity=0.151 Sum_probs=79.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
..+++|||+|..++..++.+.. ++-.+|.|.+|++++++++++++. +++.. +. +.++++++++|+|+.|+
T Consensus 129 a~~l~iiGaG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~---~~----~~~~~av~~ADIIvtaT 201 (346)
T PRK07589 129 SRTMALIGNGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIV---AC----RSVAEAVEGADIITTVT 201 (346)
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEE---Ee----CCHHHHHhcCCEEEEec
Confidence 4789999999999999987765 344469999999999999988764 22222 22 35788889999999999
Q ss_pred CCccc-HHHHHHHHHcCCeEEEccCChHHHHHHHHHHHH
Q psy12817 642 PYNLH-HHVAEFCIQHGKNLVTASYLSPEMMALHERAAS 679 (1201)
Q Consensus 642 P~~~h-~~VakacIeaGkh~VD~Syvs~e~~eLde~Ake 679 (1201)
|..-. +-+-...++.|+|+.-+.-..+.++|++.+.-+
T Consensus 202 ~S~~~~Pvl~~~~lkpG~hV~aIGs~~p~~~Eld~~~l~ 240 (346)
T PRK07589 202 ADKTNATILTDDMVEPGMHINAVGGDCPGKTELHPDILR 240 (346)
T ss_pred CCCCCCceecHHHcCCCcEEEecCCCCCCcccCCHHHHh
Confidence 74332 223346789999988886666777777665433
No 150
>COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]
Probab=97.26 E-value=0.002 Score=72.27 Aligned_cols=132 Identities=21% Similarity=0.173 Sum_probs=86.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC-C
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL-P 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l-P 642 (1201)
.++|+++|.|.+|...++.|..+++++++ +.+++.++.-+=..++.+..-.-+-+++ +.+..-+. -..+++.+.+ |
T Consensus 2 ~~~vvqyGtG~vGv~air~l~akpe~elvgawv~s~ak~Gkdlgelagl~dlgV~a~~-~~~avlAt-l~~~~~y~~~~~ 79 (350)
T COG3804 2 SLRVVQYGTGSVGVAAIRGLLAKPELELVGAWVHSAAKSGKDLGELAGLPDLGVIATN-SIDAVLAT-LADAVIYAPLLP 79 (350)
T ss_pred CceeEEeccchHHHHHHHHHHcCCCCceEEEEecCcccccccHHHhcCCCCceeEeec-ccccceec-cccceeeecccc
Confidence 36899999999999999999999899854 5677766543222222111100111111 01111111 1234455544 4
Q ss_pred CcccHHHHHHHHHcCCeEEEcc--------CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHH
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTAS--------YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAME 701 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~S--------yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~ 701 (1201)
. ..-.+.|+++|+|+|+.. |.++...+.++.|+++|..-+.+.|.+||+.+-+...
T Consensus 80 --~-~~~y~rlL~aGiNVv~~g~~l~yPw~~~PelaeKpl~lAaraGn~Tl~gtGI~pGF~~dllpm 143 (350)
T COG3804 80 --S-VDEYARLLRAGINVVTPGPVLQYPWFYPPELAEKPLELAARAGNATLHGTGIGPGFVTDLLPM 143 (350)
T ss_pred --h-HHHHHHHHHcCCceeccCccccCCCcCChHHhhchHHHHHhcCCceEEecccCccHHHHHHHH
Confidence 2 556789999999999972 2566677788999999997778999999998766543
No 151
>PRK08328 hypothetical protein; Provisional
Probab=97.23 E-value=0.0021 Score=70.99 Aligned_cols=100 Identities=15% Similarity=0.255 Sum_probs=62.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHH------------------------HHHHcCCeeEE--
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDK------------------------VTNEFGRVEAT-- 615 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~------------------------La~~~~~v~~v-- 615 (1201)
..+..+|+|+|+|.+|..++.+|++.+--+++++|.+.-+... +.+..|.+...
T Consensus 24 ~L~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~ 103 (231)
T PRK08328 24 KLKKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF 103 (231)
T ss_pred HHhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 3557899999999999999999999876679999855321111 11112333322
Q ss_pred EeecCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 616 LIDVNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 616 ~lDV~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
...+. .+.+.++++++|+||+|+-. .....+.+.|.+.|++++..+
T Consensus 104 ~~~~~---~~~~~~~l~~~D~Vid~~d~~~~r~~l~~~~~~~~ip~i~g~ 150 (231)
T PRK08328 104 VGRLS---EENIDEVLKGVDVIVDCLDNFETRYLLDDYAHKKGIPLVHGA 150 (231)
T ss_pred eccCC---HHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 22222 34566677788888888733 222345556777777777643
No 152
>PRK06823 ornithine cyclodeaminase; Validated
Probab=97.21 E-value=0.00076 Score=77.84 Aligned_cols=114 Identities=14% Similarity=0.174 Sum_probs=82.9
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRD-ENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~-~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..++++|||+|..++..++.+..- +--+|.|.+|++++++++++... ++... +. ++.+++++++|+|+.|
T Consensus 127 d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~---~~----~~~~~av~~ADIV~ta 199 (315)
T PRK06823 127 HVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVN---TT----LDAAEVAHAANLIVTT 199 (315)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEE---EE----CCHHHHhcCCCEEEEe
Confidence 357999999999999999988764 33459999999999999887653 22221 12 2567888999999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHH-cCCEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAAS-AGITVL 685 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~Ake-AGVtil 685 (1201)
+|.. .+-+-...++.|.|+.-+.-..+.+++++.+.-+ +...++
T Consensus 200 T~s~-~P~~~~~~l~~G~hi~~iGs~~p~~~Eld~~~l~~a~~vvv 244 (315)
T PRK06823 200 TPSR-EPLLQAEDIQPGTHITAVGADSPGKQELDAELVARADKILV 244 (315)
T ss_pred cCCC-CceeCHHHcCCCcEEEecCCCCcccccCCHHHHhhCCEEEE
Confidence 9744 2333345688999999987666788888765444 334443
No 153
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.21 E-value=0.0015 Score=77.55 Aligned_cols=117 Identities=13% Similarity=0.193 Sum_probs=79.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----Ce------eEEEeecCCCCchHHHhhccCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RV------EATLIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v------~~v~lDV~D~~~e~L~elI~~~ 634 (1201)
|||.|+|+|+||.+++..++. +++|+++|+++++++++.+... ++ ....+-. ..+..+.++++
T Consensus 1 mkI~VIGlGyvGl~~A~~lA~--G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~----t~~~~~~~~~a 74 (388)
T PRK15057 1 MKITISGTGYVGLSNGLLIAQ--NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNA----TLDKNEAYRDA 74 (388)
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEE----ecchhhhhcCC
Confidence 489999999999999976663 5889999999999998876321 00 0001111 11244556789
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHH
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLA 699 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA 699 (1201)
|+||.|+|.... .+....|++++....+.+.+ . +.|.+++.+.-+.||...-++
T Consensus 75 d~vii~Vpt~~~---------~k~~~~dl~~v~~v~~~i~~-~-~~g~lVV~~STv~pgtt~~l~ 128 (388)
T PRK15057 75 DYVIIATPTDYD---------PKTNYFNTSSVESVIKDVVE-I-NPYAVMVIKSTVPVGFTAAMH 128 (388)
T ss_pred CEEEEeCCCCCc---------cCCCCcChHHHHHHHHHHHh-c-CCCCEEEEeeecCCchHHHHH
Confidence 999999987642 22234566666555556644 3 668888888889998765444
No 154
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.20 E-value=0.0028 Score=76.25 Aligned_cols=90 Identities=17% Similarity=0.316 Sum_probs=66.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||+|+| +|.+|..++..|.+. +++|++.+|+.+++++++..+ ++. +. ....+.+.++|+||.|+|..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~-G~~V~v~~r~~~~~~~~a~~~-gv~-----~~----~~~~e~~~~aDvVIlavp~~ 69 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEK-GFEVIVTGRDPKKGKEVAKEL-GVE-----YA----NDNIDAAKDADIVIISVPIN 69 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHHc-CCe-----ec----cCHHHHhccCCEEEEecCHH
Confidence 5899998 899999999999876 468999999998877777665 332 12 23556678899999999976
Q ss_pred ccHHHHHHH---HHcCCeEEEccCC
Q psy12817 645 LHHHVAEFC---IQHGKNLVTASYL 666 (1201)
Q Consensus 645 ~h~~Vakac---IeaGkh~VD~Syv 666 (1201)
....+++.. +..++-++|.+-+
T Consensus 70 ~~~~vl~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 70 VTEDVIKEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred HHHHHHHHHHhhCCCCCEEEEcccc
Confidence 545555443 3456677887654
No 155
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.19 E-value=0.0021 Score=72.51 Aligned_cols=93 Identities=16% Similarity=0.256 Sum_probs=65.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCC---CCeEEEEeCCH-HHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDE---NIHITLGSLLK-EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~---~~~VtVadR~~-ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+||++||+|.||.+++..|.+.+ ..+|++.+|+. ++++.++..+ ++.. .+ ...++++++|+||.|+
T Consensus 4 mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~-g~~~-----~~----~~~e~~~~aDvVilav 73 (279)
T PRK07679 4 QNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKY-GVKG-----TH----NKKELLTDANILFLAM 73 (279)
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhc-CceE-----eC----CHHHHHhcCCEEEEEe
Confidence 58999999999999999998764 35789999976 4677777665 3432 12 2345567899999999
Q ss_pred CCcccHHHHHHH---HHcCCeEEEc-cCChH
Q psy12817 642 PYNLHHHVAEFC---IQHGKNLVTA-SYLSP 668 (1201)
Q Consensus 642 P~~~h~~Vakac---IeaGkh~VD~-Syvs~ 668 (1201)
|+.....++... ++.++.+|++ +-++.
T Consensus 74 ~p~~~~~vl~~l~~~~~~~~liIs~~aGi~~ 104 (279)
T PRK07679 74 KPKDVAEALIPFKEYIHNNQLIISLLAGVST 104 (279)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEECCCCCH
Confidence 876555544432 3456677775 44443
No 156
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=97.18 E-value=0.0013 Score=74.11 Aligned_cols=72 Identities=17% Similarity=0.220 Sum_probs=60.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|+|+|.| +|++|+.+++.|.+. +++|++.+|+.++...+.. .++..+..|+.| .+.+.++++++|+||++.+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~~--~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ-GEEVRVLVRPTSDRRNLEG--LDVEIVEGDLRD--PASLRKAVAGCRALFHVAA 73 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC-CCEEEEEEecCcccccccc--CCceEEEeeCCC--HHHHHHHHhCCCEEEEece
Confidence 4799999 699999999999987 5789999998776544321 257888999998 8899999999999999974
No 157
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=97.18 E-value=0.00074 Score=75.36 Aligned_cols=69 Identities=14% Similarity=0.169 Sum_probs=57.2
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc------cC-CcEEE
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV------RS-ADLVV 638 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI------~~-~DVVI 638 (1201)
+|+|+| +|++|+.++++|.+. +++|++.+|+++++.. ++++.+..|+.| .+.+.+++ ++ +|.|+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~-g~~V~~~~R~~~~~~~-----~~~~~~~~d~~d--~~~l~~a~~~~~~~~g~~d~v~ 72 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA-SVPFLVASRSSSSSAG-----PNEKHVKFDWLD--EDTWDNPFSSDDGMEPEISAVY 72 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC-CCcEEEEeCCCccccC-----CCCccccccCCC--HHHHHHHHhcccCcCCceeEEE
Confidence 589999 699999999999886 5789999999876531 356777889998 88898887 56 89999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
.+.|.
T Consensus 73 ~~~~~ 77 (285)
T TIGR03649 73 LVAPP 77 (285)
T ss_pred EeCCC
Confidence 88874
No 158
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.18 E-value=0.00055 Score=69.26 Aligned_cols=90 Identities=26% Similarity=0.281 Sum_probs=56.9
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
..+||.|||+|++|..++..|.+.+ ++| .+.+|+.+.+++++..++.... ..+.+.++++|+|+.++|
T Consensus 9 ~~l~I~iIGaGrVG~~La~aL~~ag-~~v~~v~srs~~sa~~a~~~~~~~~~----------~~~~~~~~~aDlv~iavp 77 (127)
T PF10727_consen 9 ARLKIGIIGAGRVGTALARALARAG-HEVVGVYSRSPASAERAAAFIGAGAI----------LDLEEILRDADLVFIAVP 77 (127)
T ss_dssp ---EEEEECTSCCCCHHHHHHHHTT-SEEEEESSCHH-HHHHHHC--TT---------------TTGGGCC-SEEEE-S-
T ss_pred CccEEEEECCCHHHHHHHHHHHHCC-CeEEEEEeCCcccccccccccccccc----------cccccccccCCEEEEEec
Confidence 4689999999999999999999874 665 4678999888888877654332 234566789999999999
Q ss_pred CcccHHHHHHHHH-----cCCeEEEcc
Q psy12817 643 YNLHHHVAEFCIQ-----HGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~VakacIe-----aGkh~VD~S 664 (1201)
...=.++++.-.. .|+-++-+|
T Consensus 78 DdaI~~va~~La~~~~~~~g~iVvHtS 104 (127)
T PF10727_consen 78 DDAIAEVAEQLAQYGAWRPGQIVVHTS 104 (127)
T ss_dssp CCHHHHHHHHHHCC--S-TT-EEEES-
T ss_pred hHHHHHHHHHHHHhccCCCCcEEEECC
Confidence 8755555554433 355566655
No 159
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=97.15 E-value=0.0059 Score=69.10 Aligned_cols=100 Identities=18% Similarity=0.185 Sum_probs=64.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHH----HcCCeeEEEee
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTN----EFGRVEATLID 618 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~----~~~~v~~v~lD 618 (1201)
..+..+|+|+|+|.+|..+++.|++.+--+++++|.+. .+++.+++ -.|.++....+
T Consensus 27 kL~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~ 106 (268)
T PRK15116 27 LFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD 106 (268)
T ss_pred HhcCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence 35678999999999999999999998756788888651 13333333 23444433332
Q ss_pred c-CCCCchHHHhhcc-CCcEEEEcCCC-cccHHHHHHHHHcCCeEEEc
Q psy12817 619 V-NNGGSDNLSGLVR-SADLVVSLLPY-NLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 619 V-~D~~~e~L~elI~-~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~ 663 (1201)
- .+ ++...+++. ++|+||+|+-. .....+.+.|.+.++.++..
T Consensus 107 ~~i~--~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~ 152 (268)
T PRK15116 107 DFIT--PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTT 152 (268)
T ss_pred cccC--hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 1 12 345666664 68888888743 22345666676766666654
No 160
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.15 E-value=0.0017 Score=74.97 Aligned_cols=77 Identities=13% Similarity=0.188 Sum_probs=63.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+.++|+|.| +|++|+.++++|+++ +++|++.+|+.++.+.+...+ ++++.+..|+.| .+.+.++++++|+||+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~Vih 85 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQR-GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQE--EGSFDEAVKGCDGVFH 85 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCC--HHHHHHHHcCCCEEEE
Confidence 457999999 799999999999987 578888899887766554433 357788899998 7889999999999999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 86 ~A~~ 89 (353)
T PLN02896 86 VAAS 89 (353)
T ss_pred CCcc
Confidence 9853
No 161
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=97.14 E-value=0.0031 Score=70.62 Aligned_cols=121 Identities=17% Similarity=0.266 Sum_probs=81.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEE-EEeCCHHH-----HHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHIT-LGSLLKED-----IDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~Vt-VadR~~ek-----Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
+|+||+|.| +|+||+.+++.+.+.+++++. ..+|.... +.+++ +.....+-+.+ ++.....++|+
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~----g~~~~gv~v~~----~~~~~~~~~DV 72 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELA----GLGLLGVPVTD----DLLLVKADADV 72 (266)
T ss_pred CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhc----cccccCceeec----chhhcccCCCE
Confidence 478999999 599999999999999988854 55665432 22222 12222223343 24455568999
Q ss_pred EEEcCCCcccHHHHHHHHHcCCeEEE-c-cCChHHHHHHHHHHHHcCCEEEeccccCchh
Q psy12817 637 VVSLLPYNLHHHVAEFCIQHGKNLVT-A-SYLSPEMMALHERAASAGITVLNEVGLDPGI 694 (1201)
Q Consensus 637 VIs~lP~~~h~~VakacIeaGkh~VD-~-Syvs~e~~eLde~AkeAGVtil~e~GlDPGI 694 (1201)
+|+-+-+....+.++.|++++++.|- + .+..++.+.|.+.+++.++.+ .--|.-|+
T Consensus 73 ~IDFT~P~~~~~~l~~~~~~~~~lVIGTTGf~~e~~~~l~~~a~~v~vv~--a~NfSiGv 130 (266)
T COG0289 73 LIDFTTPEATLENLEFALEHGKPLVIGTTGFTEEQLEKLREAAEKVPVVI--APNFSLGV 130 (266)
T ss_pred EEECCCchhhHHHHHHHHHcCCCeEEECCCCCHHHHHHHHHHHhhCCEEE--eccchHHH
Confidence 99998556668889999999987554 4 356667777888888844444 44444454
No 162
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=97.13 E-value=0.00014 Score=83.66 Aligned_cols=113 Identities=19% Similarity=0.210 Sum_probs=70.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcCC--eeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFGR--VEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~~--v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
..+++|||+|..|+..++.+.. ++--+|.|.+|++++++++++.+.. +.... .++.+++++++|+|+.|+
T Consensus 128 ~~~l~viGaG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~-------~~~~~~av~~aDii~taT 200 (313)
T PF02423_consen 128 ARTLGVIGAGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVA-------VDSAEEAVRGADIIVTAT 200 (313)
T ss_dssp --EEEEE--SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEE-------ESSHHHHHTTSSEEEE--
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcccccccee-------ccchhhhcccCCEEEEcc
Confidence 4699999999999999998876 4544699999999999999987643 22221 235788899999999999
Q ss_pred CCccc-HHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEE
Q psy12817 642 PYNLH-HHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITV 684 (1201)
Q Consensus 642 P~~~h-~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVti 684 (1201)
|.... +-+-...++.|+|+..+....+.+++|+...-+.-..+
T Consensus 201 ~s~~~~P~~~~~~l~~g~hi~~iGs~~~~~~El~~~~~~~a~~~ 244 (313)
T PF02423_consen 201 PSTTPAPVFDAEWLKPGTHINAIGSYTPGMRELDDELLKRADIV 244 (313)
T ss_dssp --SSEEESB-GGGS-TT-EEEE-S-SSTTBESB-HHHHHCSEEE
T ss_pred CCCCCCccccHHHcCCCcEEEEecCCCCchhhcCHHHhccCCEE
Confidence 86542 33334578899999998766666777766554443333
No 163
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.13 E-value=0.0039 Score=74.42 Aligned_cols=116 Identities=14% Similarity=0.184 Sum_probs=83.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHH-hhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLS-GLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~-elI~~~DVVIs~l 641 (1201)
..+++|+|+|+|.+|+.+++.|.+. +.+|+++++++++.+++.+.++++..+..|.++ .+.|. .-++++|+||.++
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~-~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~--~~~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKE-GYSVKLIERDPERAEELAEELPNTLVLHGDGTD--QELLEEEGIDEADAFIALT 305 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHCCCCeEEECCCCC--HHHHHhcCCccCCEEEECC
Confidence 4579999999999999999999875 578999999999999888776677888899988 77775 4467899999999
Q ss_pred CCc-ccHHHHHHHHHcCCe-EEEccCChHHHHHHHHHHHHcCCEEE
Q psy12817 642 PYN-LHHHVAEFCIQHGKN-LVTASYLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 642 P~~-~h~~VakacIeaGkh-~VD~Syvs~e~~eLde~AkeAGVtil 685 (1201)
+.. .+..++..|-+.+.. ++-....... .+..+..|+..+
T Consensus 306 ~~~~~n~~~~~~~~~~~~~~ii~~~~~~~~----~~~~~~~g~~~v 347 (453)
T PRK09496 306 NDDEANILSSLLAKRLGAKKVIALVNRPAY----VDLVEGLGIDIA 347 (453)
T ss_pred CCcHHHHHHHHHHHHhCCCeEEEEECCcch----HHHHHhcCCCEE
Confidence 854 334444455555543 3333332222 233566777544
No 164
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.13 E-value=0.0025 Score=76.19 Aligned_cols=114 Identities=13% Similarity=0.199 Sum_probs=71.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh--------------
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-------------- 630 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-------------- 630 (1201)
++||.|||+|+||.+++..|++. +++|++.|+++++++.+.... .. +.+ ..+.++
T Consensus 3 ~~kI~VIGlG~~G~~~A~~La~~-G~~V~~~D~~~~~v~~l~~g~--~~-----~~e---~~l~~~l~~~~~~g~l~~~~ 71 (415)
T PRK11064 3 FETISVIGLGYIGLPTAAAFASR-QKQVIGVDINQHAVDTINRGE--IH-----IVE---PDLDMVVKTAVEGGYLRATT 71 (415)
T ss_pred ccEEEEECcchhhHHHHHHHHhC-CCEEEEEeCCHHHHHHHHCCC--CC-----cCC---CCHHHHHHHHhhcCceeeec
Confidence 58999999999999999999987 589999999999998865422 11 111 111111
Q ss_pred -ccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 631 -VRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 631 -I~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
++++|+||.|+|...... .-.|.+++....+.+.+. -+.|..++.+....||-..-++.
T Consensus 72 ~~~~aDvvii~vptp~~~~----------~~~dl~~v~~~~~~i~~~-l~~g~iVI~~STv~pgtt~~~~~ 131 (415)
T PRK11064 72 TPEPADAFLIAVPTPFKGD----------HEPDLTYVEAAAKSIAPV-LKKGDLVILESTSPVGATEQMAE 131 (415)
T ss_pred ccccCCEEEEEcCCCCCCC----------CCcChHHHHHHHHHHHHh-CCCCCEEEEeCCCCCCHHHHHHH
Confidence 247999999998753100 011222222222333222 24567777777777876655544
No 165
>KOG1502|consensus
Probab=97.12 E-value=0.0017 Score=75.03 Aligned_cols=97 Identities=19% Similarity=0.279 Sum_probs=73.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHH--HHHHc----CCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDK--VTNEF----GRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~--La~~~----~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.+++|+|-| +|+||+.+++.|+.+ +++|...-|++++-+. ....+ ++.+.+..|+.| .+++.+.+++||.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r-GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d--~~sf~~ai~gcdg 81 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR-GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLD--EGSFDKAIDGCDG 81 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC-CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccc--cchHHHHHhCCCE
Confidence 578999999 699999999999987 5889888898887433 12233 247788899998 8999999999999
Q ss_pred EEEcC-CCccc----------------HHHHHHHHHcC--CeEEEc
Q psy12817 637 VVSLL-PYNLH----------------HHVAEFCIQHG--KNLVTA 663 (1201)
Q Consensus 637 VIs~l-P~~~h----------------~~VakacIeaG--kh~VD~ 663 (1201)
|+.+. |..+. ..|.++|.+.+ +.+|-+
T Consensus 82 VfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~T 127 (327)
T KOG1502|consen 82 VFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYT 127 (327)
T ss_pred EEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEe
Confidence 99997 54331 12567777777 444433
No 166
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.11 E-value=0.0048 Score=68.42 Aligned_cols=98 Identities=17% Similarity=0.244 Sum_probs=60.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHH----cCCeeEEEee-
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNE----FGRVEATLID- 618 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~----~~~v~~v~lD- 618 (1201)
.+..+|+|+|+|.+|..+++.|++.+--+++++|.+. .|++.+++. .|.++....+
T Consensus 9 L~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~ 88 (231)
T cd00755 9 LRNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE 88 (231)
T ss_pred HhCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence 4568999999999999999999998766799888653 133333332 2444332222
Q ss_pred -cCCCCchHHHhhcc-CCcEEEEcCCC-cccHHHHHHHHHcCCeEEEc
Q psy12817 619 -VNNGGSDNLSGLVR-SADLVVSLLPY-NLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 619 -V~D~~~e~L~elI~-~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~ 663 (1201)
+. ++...+++. ++|+||+|+-. .....+.+.|.+.++.++..
T Consensus 89 ~i~---~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s 133 (231)
T cd00755 89 FLT---PDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISS 133 (231)
T ss_pred ecC---HhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 22 244555553 58888888632 12233555555555555543
No 167
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.11 E-value=0.0011 Score=77.09 Aligned_cols=91 Identities=16% Similarity=0.162 Sum_probs=67.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
|+||+|+| +|++|+.+++.|.+ .+..++....+..+..+.+. +.+......|+.+ . .++++|+||.|+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~~g~~i~v~d~~~---~----~~~~vDvVf~A~ 71 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS--FKGKELKVEDLTT---F----DFSGVDIALFSA 71 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--eCCceeEEeeCCH---H----HHcCCCEEEECC
Confidence 57999999 79999999999988 45567776666544444332 2233334444432 1 235899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEcc
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~S 664 (1201)
|.....+++...+++|+-+||.|
T Consensus 72 g~g~s~~~~~~~~~~G~~VIDlS 94 (334)
T PRK14874 72 GGSVSKKYAPKAAAAGAVVIDNS 94 (334)
T ss_pred ChHHHHHHHHHHHhCCCEEEECC
Confidence 99888999999999999999986
No 168
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.08 E-value=0.0028 Score=71.76 Aligned_cols=77 Identities=23% Similarity=0.366 Sum_probs=55.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----CeeEE------------EeecCCCCchHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RVEAT------------LIDVNNGGSDNL 627 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v~~v------------~lDV~D~~~e~L 627 (1201)
++||+|||+|.||..++..|++. +++|++.|+++++++++.+... +++.- .+.. ...+
T Consensus 1 ~~~V~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~----~~~~ 75 (288)
T PRK09260 1 IEKLVVVGAGVMGRGIAYVFAVS-GFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY----SLDL 75 (288)
T ss_pred CcEEEEECccHHHHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE----eCcH
Confidence 46899999999999999999876 5789999999998877653210 00000 0111 1246
Q ss_pred HhhccCCcEEEEcCCCccc
Q psy12817 628 SGLVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 628 ~elI~~~DVVIs~lP~~~h 646 (1201)
.+.++++|+||.|+|....
T Consensus 76 ~~~~~~aD~Vi~avpe~~~ 94 (288)
T PRK09260 76 KAAVADADLVIEAVPEKLE 94 (288)
T ss_pred HHhhcCCCEEEEeccCCHH
Confidence 6778899999999997653
No 169
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.08 E-value=0.003 Score=66.43 Aligned_cols=80 Identities=15% Similarity=0.275 Sum_probs=54.5
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhh
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFA 275 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~ 275 (1201)
.+++|+|.|.+|+|..+.++.+| ++|+|+++.+ ...++....| |... -.
T Consensus 24 k~vvV~GYG~vG~g~A~~lr~~G----------------a~V~V~e~DP--i~alqA~~dG-f~v~------------~~ 72 (162)
T PF00670_consen 24 KRVVVIGYGKVGKGIARALRGLG----------------ARVTVTEIDP--IRALQAAMDG-FEVM------------TL 72 (162)
T ss_dssp SEEEEE--SHHHHHHHHHHHHTT-----------------EEEEE-SSH--HHHHHHHHTT--EEE-------------H
T ss_pred CEEEEeCCCcccHHHHHHHhhCC----------------CEEEEEECCh--HHHHHhhhcC-cEec------------CH
Confidence 67999999999999999999999 6788888765 3445554444 4321 12
Q ss_pred hhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 276 SKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 276 ~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
++.++.+|++|++ .....+|+.+++++ ||.|
T Consensus 73 ~~a~~~adi~vta----TG~~~vi~~e~~~~-mkdg 103 (162)
T PF00670_consen 73 EEALRDADIFVTA----TGNKDVITGEHFRQ-MKDG 103 (162)
T ss_dssp HHHTTT-SEEEE-----SSSSSSB-HHHHHH-S-TT
T ss_pred HHHHhhCCEEEEC----CCCccccCHHHHHH-hcCC
Confidence 4578899999998 44567899999999 9999
No 170
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0027 Score=68.29 Aligned_cols=75 Identities=15% Similarity=0.278 Sum_probs=61.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
+++|+|+| +|.+|+.++++|++. +.+|++.+|++++++++...+ .++..+.+|+.| .+.+.++++ .
T Consensus 6 ~~~ilItGatg~iG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 6 GKVALITGGSKGIGFAIAEALLAE-GYKVAITARDQKELEEAAAELNNKGNVLGLAADVRD--EADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHC-CCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 47899999 699999999999986 678999999998887776554 357788899998 777776665 6
Q ss_pred CcEEEEcCC
Q psy12817 634 ADLVVSLLP 642 (1201)
Q Consensus 634 ~DVVIs~lP 642 (1201)
+|+||++..
T Consensus 83 ~d~vi~~ag 91 (237)
T PRK07326 83 LDVLIANAG 91 (237)
T ss_pred CCEEEECCC
Confidence 899999974
No 171
>PRK06182 short chain dehydrogenase; Validated
Probab=97.04 E-value=0.0027 Score=70.38 Aligned_cols=74 Identities=14% Similarity=0.227 Sum_probs=62.4
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~DV 636 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++... ++..+.+|++| .+.++++++ +.|+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~l~~~~~~--~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQ-GYTVYGAARRVDKMEDLASL--GVHPLSLDVTD--EASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhC--CCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCE
Confidence 57899999 699999999999986 57899999999888776542 57889999998 788877775 6899
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++.+.
T Consensus 78 li~~ag~ 84 (273)
T PRK06182 78 LVNNAGY 84 (273)
T ss_pred EEECCCc
Confidence 9999864
No 172
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=97.03 E-value=0.0018 Score=73.22 Aligned_cols=77 Identities=16% Similarity=0.171 Sum_probs=60.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHH---HHH---cCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKV---TNE---FGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~L---a~~---~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
..++|+|.| +|++|+.+++.|.++ +++|++.+|+.+..... ... .++++.+..|+.| .+.+.++++++|+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~ 79 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQR-GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLE--EGSFDSVVDGCEG 79 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHC-CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccC--cchHHHHHcCCCE
Confidence 458999999 799999999999987 57888888876543222 111 1357788899998 7889999999999
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 80 Vih~A~~ 86 (322)
T PLN02662 80 VFHTASP 86 (322)
T ss_pred EEEeCCc
Confidence 9999853
No 173
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0028 Score=69.00 Aligned_cols=75 Identities=11% Similarity=0.126 Sum_probs=62.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC----CcEEEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS----ADLVVS 639 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~----~DVVIs 639 (1201)
|++++|.| +|.+|+.+++.|+++ +.+|++.+|+.++++++.....++..+.+|++| .+++++++++ .|++|+
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQ-GWQVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhcccCCCEEEE
Confidence 57899999 799999999999986 578999999999888887655568889999998 8888888765 466666
Q ss_pred cCC
Q psy12817 640 LLP 642 (1201)
Q Consensus 640 ~lP 642 (1201)
+..
T Consensus 78 ~ag 80 (240)
T PRK06101 78 NAG 80 (240)
T ss_pred cCc
Confidence 653
No 174
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.02 E-value=0.0059 Score=66.86 Aligned_cols=71 Identities=20% Similarity=0.277 Sum_probs=65.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
++|+|+| +|++|+.+++.|.++ +++|.++.|+.+++..+. .+++.+..|..+ ...+...+++.|.++.+.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~-~~~v~~~~r~~~~~~~~~---~~v~~~~~d~~~--~~~l~~a~~G~~~~~~i~~ 72 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR-GHEVRAAVRNPEAAAALA---GGVEVVLGDLRD--PKSLVAGAKGVDGVLLISG 72 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC-CCEEEEEEeCHHHHHhhc---CCcEEEEeccCC--HhHHHHHhccccEEEEEec
Confidence 5899999 799999999999988 789999999999998877 578999999998 8899999999999999987
No 175
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.0026 Score=68.82 Aligned_cols=78 Identities=12% Similarity=0.221 Sum_probs=62.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+|++++|.| +|.+|+.+++.|+++ +.+|++++|+.++.+.+.+.. .++..+.+|++| .+.+.++++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 80 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKA-GWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQ 80 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 3578999999 699999999999986 468999999998877765543 247788899998 777766654
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 81 ~~~id~lv~~ag~ 93 (241)
T PRK07454 81 FGCPDVLINNAGM 93 (241)
T ss_pred cCCCCEEEECCCc
Confidence 47999999753
No 176
>COG5310 Homospermidine synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.01 E-value=0.0015 Score=74.12 Aligned_cols=196 Identities=15% Similarity=0.242 Sum_probs=123.3
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC---CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-chHHHhhccC---CcEEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN---IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-SDNLSGLVRS---ADLVV 638 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~---~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-~e~L~elI~~---~DVVI 638 (1201)
-+|++||.|.||+-..-.+.++-+ -+++|.|......+.+.++ ++++++--++..+ .+-|..++++ .-.+|
T Consensus 14 gpIimIGfGSigrgTLPLierhf~~d~~~~~viDp~ek~~k~~~~~--girfV~e~it~~Nyk~vL~pll~~~~gqgf~v 91 (481)
T COG5310 14 GPIIMIGFGSIGRGTLPLIERHFKFDRSRMVVIDPREKDRKILDER--GIRFVQEAITRDNYKDVLKPLLKGVGGQGFCV 91 (481)
T ss_pred CcEEEEeecccccccchhHHHhcCCChhheEEechhHHHHHHHHhh--hhHHHHHhcChhhHHHHHHHHhhcCCCceEEE
Confidence 579999999999987777766533 3588999887666655543 4554444343200 1234444554 67899
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEcc-------CChHH----------HHH--HHHHHHHc-CCEEEeccccCchhHHHH
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTAS-------YLSPE----------MMA--LHERAASA-GITVLNEVGLDPGIDHLL 698 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~S-------yvs~e----------~~e--Lde~AkeA-GVtil~e~GlDPGIdhml 698 (1201)
|+.-..-...+++.|-++|+-|||++ |.... .++ +.+..++- |-+.+..||..||+...+
T Consensus 92 nLSvd~~s~Dlmr~crk~~vLYidTvVEpW~gfyfDa~adn~artnyaLRet~lrEk~r~pgg~TaVs~cGANPGmvswF 171 (481)
T COG5310 92 NLSVDTSSLDLMRLCRKHGVLYIDTVVEPWLGFYFDAQADNAARTNYALRETVLREKRRNPGGPTAVSTCGANPGMVSWF 171 (481)
T ss_pred EeEeccchhHHHHHHHHcCeEEEeeeeccccccchhhhhhhhhhhhHHHHHHHHHHhccCCCCCeeeeecCCCchHHHHH
Confidence 98766667889999999999999985 21111 122 23334444 568999999999998888
Q ss_pred HHHHHHHh-----------------------hhcCCcEEE-EEeecCCCCCCCCCCCccccccccChHHHHHHhccceee
Q psy12817 699 AMECIDAA-----------------------HLNGGKVES-FVSYCGGLPAPECSENPLRYKFSWSPRGVLLNTLSSAKY 754 (1201)
Q Consensus 699 A~~~idei-----------------------~~~ggkV~s-f~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a~~~~A~~ 754 (1201)
..+.+=.+ +..|-+... .+--..+-+.|. .+-++--+||.+|.+.+...||+.
T Consensus 172 VKqaLvdlAad~~ld~~ep~~ddr~gwAkLmkK~GVkgiHiaeRdTqra~~Pk---p~n~fwntWsveGfi~EG~qPaEl 248 (481)
T COG5310 172 VKQALVDLAADLGLDFEEPAQDDREGWAKLMKKAGVKGIHIAERDTQRAKKPK---PFNGFWNTWSVEGFITEGLQPAEL 248 (481)
T ss_pred HHHHHHHHHHHhCcCccCCcchhhHHHHHHHHHcCCceEEEEeeccccCCCCC---CCcccccceeeeeeccCCCChhhh
Confidence 76632211 111222211 111122223222 333444589999999999999999
Q ss_pred eeCCeEEEecCC
Q psy12817 755 LQNSQVVDIPAG 766 (1201)
Q Consensus 755 l~dG~~v~Vp~~ 766 (1201)
..+-.....|..
T Consensus 249 gWGtHenw~pkn 260 (481)
T COG5310 249 GWGTHENWMPKN 260 (481)
T ss_pred ccCCccccCCcc
Confidence 888766666543
No 177
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=97.01 E-value=0.0026 Score=77.62 Aligned_cols=113 Identities=13% Similarity=0.100 Sum_probs=69.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-------CCeeEE------EeecCCCCchHHHhhc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-------GRVEAT------LIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-------~~v~~v------~lDV~D~~~e~L~elI 631 (1201)
.+||.|||+|.||..++..|++. +++|++.|+++++++++.+.. ...... .+.+. +++.+++
T Consensus 4 i~kIavIG~G~MG~~iA~~la~~-G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~----~~~~ea~ 78 (495)
T PRK07531 4 IMKAACIGGGVIGGGWAARFLLA-GIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFC----ASLAEAV 78 (495)
T ss_pred cCEEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEee----CCHHHHh
Confidence 46899999999999999999986 689999999999877653211 000000 01122 3567788
Q ss_pred cCCcEEEEcCCCccc--HHHH---HHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 632 RSADLVVSLLPYNLH--HHVA---EFCIQHGKNLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~h--~~Va---kacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
+++|+|+.|+|.... ..+. ...+..++ +++.|-......++.+.+++.+..
T Consensus 79 ~~aD~Vieavpe~~~vk~~l~~~l~~~~~~~~-iI~SsTsgi~~s~l~~~~~~~~r~ 134 (495)
T PRK07531 79 AGADWIQESVPERLDLKRRVLAEIDAAARPDA-LIGSSTSGFLPSDLQEGMTHPERL 134 (495)
T ss_pred cCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCc-EEEEcCCCCCHHHHHhhcCCcceE
Confidence 999999999997753 2221 12223333 455544333344554444444443
No 178
>PLN02650 dihydroflavonol-4-reductase
Probab=97.00 E-value=0.0021 Score=74.07 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=61.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhccCCc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
.+.++|+|.| +|++|+.+++.|++. +.+|++.+|+.+.+..+.... +++.++..|+.| .+.+.++++++|
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d--~~~~~~~~~~~d 79 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLLER-GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAV--EGSFDDAIRGCT 79 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHC-CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCC--hhhHHHHHhCCC
Confidence 3467999999 799999999999986 578988888876655443221 146778899998 788999999999
Q ss_pred EEEEcCC
Q psy12817 636 LVVSLLP 642 (1201)
Q Consensus 636 VVIs~lP 642 (1201)
.||++..
T Consensus 80 ~ViH~A~ 86 (351)
T PLN02650 80 GVFHVAT 86 (351)
T ss_pred EEEEeCC
Confidence 9999984
No 179
>PLN02256 arogenate dehydrogenase
Probab=97.00 E-value=0.0059 Score=70.28 Aligned_cols=92 Identities=11% Similarity=0.104 Sum_probs=62.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-cCCcEEEEc
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-RSADLVVSL 640 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-~~~DVVIs~ 640 (1201)
...+++|+|||+|.||+.++..|.+. +.+|++++++... +.+..+ ++.. .. .+.+++ .++|+||.|
T Consensus 33 ~~~~~kI~IIG~G~mG~slA~~L~~~-G~~V~~~d~~~~~--~~a~~~-gv~~----~~-----~~~e~~~~~aDvVila 99 (304)
T PLN02256 33 KSRKLKIGIVGFGNFGQFLAKTFVKQ-GHTVLATSRSDYS--DIAAEL-GVSF----FR-----DPDDFCEEHPDVVLLC 99 (304)
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECccHH--HHHHHc-CCee----eC-----CHHHHhhCCCCEEEEe
Confidence 34678999999999999999999876 4689999998642 334444 3321 22 234444 469999999
Q ss_pred CCCcccHHHHHHH----HHcCCeEEEccCC
Q psy12817 641 LPYNLHHHVAEFC----IQHGKNLVTASYL 666 (1201)
Q Consensus 641 lP~~~h~~Vakac----IeaGkh~VD~Syv 666 (1201)
+|......+++.. ++.++-++|.+-+
T Consensus 100 vp~~~~~~vl~~l~~~~l~~~~iviDv~Sv 129 (304)
T PLN02256 100 TSILSTEAVLRSLPLQRLKRSTLFVDVLSV 129 (304)
T ss_pred cCHHHHHHHHHhhhhhccCCCCEEEecCCc
Confidence 9976656665543 3455667776543
No 180
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=97.00 E-value=0.0028 Score=76.99 Aligned_cols=125 Identities=12% Similarity=0.174 Sum_probs=86.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHcC-----Cee-------EEEeecCCCCchHHHhhc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEFG-----RVE-------ATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~~-----~v~-------~v~lDV~D~~~e~L~elI 631 (1201)
||||.|+|+|+||.+++-.|++.+ +++|+.+|.++++.+++.+... +.. ...+.+++ .+.+.+
T Consensus 1 ~m~I~ViG~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~----~~~~~i 76 (473)
T PLN02353 1 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFST----DVEKHV 76 (473)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEc----CHHHHH
Confidence 689999999999999999999874 6889999999999998765421 100 00122222 345667
Q ss_pred cCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHH
Q psy12817 632 RSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLA 699 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA 699 (1201)
+++|+++.|+|...... +. .+.+-.|++|+...++++.+.. +.|.+++.+.-+-||...-+.
T Consensus 77 ~~advi~I~V~TP~~~~----g~-~~~~~~Dls~v~~a~~~i~~~l-~~~~lVv~~STvp~Gtt~~~~ 138 (473)
T PLN02353 77 AEADIVFVSVNTPTKTR----GL-GAGKAADLTYWESAARMIADVS-KSDKIVVEKSTVPVKTAEAIE 138 (473)
T ss_pred hcCCEEEEEeCCCCCCC----CC-cCCCCCcHHHHHHHHHHHHhhC-CCCcEEEEeCCCCCChHHHHH
Confidence 89999999997544200 00 0023457777777777775544 457888889999999876544
No 181
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0028 Score=68.84 Aligned_cols=76 Identities=13% Similarity=0.290 Sum_probs=61.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhccC----C
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVRS----A 634 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~~----~ 634 (1201)
||+|+|.| +|++|..+++.|++. +.+|++++|+.++.+.+.+.. .++..+.+|+.| .+++++++++ .
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 77 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA-GARLYLAARDVERLERLADDLRARGAVAVSTHELDILD--TASHAAFLDSLPALP 77 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC--hHHHHHHHHHHhhcC
Confidence 68999999 799999999999987 578999999998776655432 357788999998 7777776653 5
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 78 d~vv~~ag~ 86 (243)
T PRK07102 78 DIVLIAVGT 86 (243)
T ss_pred CEEEECCcC
Confidence 999988753
No 182
>PRK06196 oxidoreductase; Provisional
Probab=96.98 E-value=0.003 Score=71.93 Aligned_cols=77 Identities=9% Similarity=0.188 Sum_probs=64.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+...++..+.+|++| .++++++++ +.|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~-G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQA-GAHVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 457899999 699999999999986 578999999999888877666567889999998 777776653 579
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99999863
No 183
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.97 E-value=0.0033 Score=68.57 Aligned_cols=79 Identities=18% Similarity=0.222 Sum_probs=56.8
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC------CeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG------RVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~------~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
|||+||| +|.||..++..|.+. +.+|++.+|+.++++.++..+. ++.. .+...+ ..+.++++|+||
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~-G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~-~~~~~~-----~~ea~~~aDvVi 73 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKA-GNKIIIGSRDLEKAEEAAAKALEELGHGGSDI-KVTGAD-----NAEAAKRADVVI 73 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC-CCEEEEEEcCHHHHHHHHHHHHhhccccCCCc-eEEEeC-----hHHHHhcCCEEE
Confidence 5899997 899999999999986 4789999999999888766431 1100 011112 245567899999
Q ss_pred EcCCCcccHHHHH
Q psy12817 639 SLLPYNLHHHVAE 651 (1201)
Q Consensus 639 s~lP~~~h~~Vak 651 (1201)
.|+|+.....+++
T Consensus 74 lavp~~~~~~~l~ 86 (219)
T TIGR01915 74 LAVPWDHVLKTLE 86 (219)
T ss_pred EECCHHHHHHHHH
Confidence 9999776555544
No 184
>PLN02688 pyrroline-5-carboxylate reductase
Probab=96.97 E-value=0.0028 Score=70.61 Aligned_cols=87 Identities=17% Similarity=0.188 Sum_probs=61.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC---CeEEEE-eCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN---IHITLG-SLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~---~~VtVa-dR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+||.+||+|.||.++++.|.+.+. .+|++. +|+.++++.+.+ + ++.. .+ ...++++++|+||.|+
T Consensus 1 ~kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~-~-g~~~-----~~----~~~e~~~~aDvVil~v 69 (266)
T PLN02688 1 FRVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQS-L-GVKT-----AA----SNTEVVKSSDVIILAV 69 (266)
T ss_pred CeEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHH-c-CCEE-----eC----ChHHHHhcCCEEEEEE
Confidence 579999999999999999987642 278888 999998877654 3 4432 11 2345567899999999
Q ss_pred CCcccHHHHHHH---HHcCCeEEEc
Q psy12817 642 PYNLHHHVAEFC---IQHGKNLVTA 663 (1201)
Q Consensus 642 P~~~h~~Vakac---IeaGkh~VD~ 663 (1201)
|...-..+.+.. +..++.+++.
T Consensus 70 ~~~~~~~vl~~l~~~~~~~~~iIs~ 94 (266)
T PLN02688 70 KPQVVKDVLTELRPLLSKDKLLVSV 94 (266)
T ss_pred CcHHHHHHHHHHHhhcCCCCEEEEe
Confidence 765445554433 3445656654
No 185
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=96.97 E-value=0.0016 Score=75.65 Aligned_cols=117 Identities=19% Similarity=0.239 Sum_probs=86.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
-..++|||+|..++..++.+...-+. +|.|.+|+++.+++++..+.+--.. ++.. .++.+++++++|+|+.|+|.
T Consensus 130 a~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~--~v~a--~~s~~~av~~aDiIvt~T~s 205 (330)
T COG2423 130 ASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGE--AVGA--ADSAEEAVEGADIVVTATPS 205 (330)
T ss_pred CcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCc--ccee--ccCHHHHhhcCCEEEEecCC
Confidence 36899999999999999999875444 5999999999999998765211000 1222 34578899999999999986
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcC-CEEEe
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAG-ITVLN 686 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAG-Vtil~ 686 (1201)
.- +-+-..-++.|+|+.-+.-..|.+++++.+..+.- ..++.
T Consensus 206 ~~-Pil~~~~l~~G~hI~aiGad~p~k~Eld~e~l~ra~~vvvD 248 (330)
T COG2423 206 TE-PVLKAEWLKPGTHINAIGADAPGKRELDPEVLARADRVVVD 248 (330)
T ss_pred CC-CeecHhhcCCCcEEEecCCCCcccccCCHHHHHhcCeEEEc
Confidence 54 45556668899999888655788888887654444 55543
No 186
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.003 Score=68.47 Aligned_cols=73 Identities=22% Similarity=0.328 Sum_probs=60.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc----CCcEEEEc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR----SADLVVSL 640 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~----~~DVVIs~ 640 (1201)
||++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.. ++..+.+|+.| .+.++++++ ..|++|++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~-g~~v~~~~r~~~~~~~~~~~~-~~~~~~~D~~~--~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND-GHKVTLVGARRDDLEVAAKEL-DVDAIVCDNTD--PASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhc-cCcEEecCCCC--HHHHHHHHHHHhhcCcEEEEC
Confidence 4799999 599999999999986 578999999999988877665 56788899998 777777665 47999998
Q ss_pred CC
Q psy12817 641 LP 642 (1201)
Q Consensus 641 lP 642 (1201)
.+
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 64
No 187
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=96.96 E-value=0.0023 Score=74.57 Aligned_cols=93 Identities=17% Similarity=0.227 Sum_probs=65.2
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHcCC---------eeEEEeecCCCCchHHHhhccCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEFGR---------VEATLIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~~~---------v~~v~lDV~D~~~e~L~elI~~~ 634 (1201)
+||+|+| +|++|+.+++.|.+++.++++.+ ++..+..+.+...++. .....+.-.+ ++ ...++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~ 74 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPE--PV----ASKDV 74 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCC--HH----HhccC
Confidence 5899999 59999999999998888887655 5444333333332221 1111111111 11 23689
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
|+|+.|+|...+.+++..+.++|+++||.|
T Consensus 75 DvVf~a~p~~~s~~~~~~~~~~G~~VIDls 104 (341)
T TIGR00978 75 DIVFSALPSEVAEEVEPKLAEAGKPVFSNA 104 (341)
T ss_pred CEEEEeCCHHHHHHHHHHHHHCCCEEEECC
Confidence 999999999999999999999999999986
No 188
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=96.96 E-value=0.0022 Score=72.64 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=56.0
Q ss_pred EEEc-CchhHHHHHHHHHhCCC-CeEEEEeCCHHHHH-HHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 569 LLLG-AGYVSRPLIEYLHRDEN-IHITLGSLLKEDID-KVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 569 LILG-AG~VG~~va~~La~~~~-~~VtVadR~~ekAe-~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
||.| +|++|+.+++.|.+++. .+|.+.|+...... .....++..++++.|++| .+++.++++++|+||.+.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d--~~~l~~a~~g~d~V~H~A 74 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITD--PESLEEALEGVDVVFHTA 74 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEecccc--HHHHHHHhcCCceEEEeC
Confidence 4777 89999999999999875 67888888765432 222333334488999998 899999999999999996
No 189
>PRK07411 hypothetical protein; Validated
Probab=96.96 E-value=0.0036 Score=74.31 Aligned_cols=100 Identities=20% Similarity=0.216 Sum_probs=71.1
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-------------------HHHH----HHHHcCCeeE--EE
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-------------------DIDK----VTNEFGRVEA--TL 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-------------------kAe~----La~~~~~v~~--v~ 616 (1201)
..+..||+|+|+|.+|..++.+|++.+--+++++|.+.- |++. +.+..|.++. +.
T Consensus 35 ~L~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~ 114 (390)
T PRK07411 35 RLKAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE 114 (390)
T ss_pred HHhcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 356789999999999999999999987667888775411 3333 2233355443 33
Q ss_pred eecCCCCchHHHhhccCCcEEEEcCC-CcccHHHHHHHHHcCCeEEEcc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLLP-YNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~lP-~~~h~~VakacIeaGkh~VD~S 664 (1201)
..++ .+...++++++|+||+|+- +.....+.+.|.+.++.+|..+
T Consensus 115 ~~~~---~~~~~~~~~~~D~Vvd~~d~~~~r~~ln~~~~~~~~p~v~~~ 160 (390)
T PRK07411 115 TRLS---SENALDILAPYDVVVDGTDNFPTRYLVNDACVLLNKPNVYGS 160 (390)
T ss_pred cccC---HHhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 3333 3456788899999999984 3345667899999999998764
No 190
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.96 E-value=0.0038 Score=67.44 Aligned_cols=101 Identities=16% Similarity=0.207 Sum_probs=69.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH---------------------HHHH----HHHHcCCeeEEEe
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE---------------------DIDK----VTNEFGRVEATLI 617 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e---------------------kAe~----La~~~~~v~~v~l 617 (1201)
.+..||+|+|+|.+|..+++.|++.+--+++++|.+.- |++. +.+..|.++....
T Consensus 17 L~~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~ 96 (198)
T cd01485 17 LRSAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV 96 (198)
T ss_pred HhhCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 55689999999999999999999987667988875411 2222 2233355544333
Q ss_pred e--cCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 618 D--VNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 618 D--V~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
+ +.+ ..+...++++++|+||.|... .....+.+.|.+.++.++..+
T Consensus 97 ~~~~~~-~~~~~~~~~~~~dvVi~~~d~~~~~~~ln~~c~~~~ip~i~~~ 145 (198)
T cd01485 97 EEDSLS-NDSNIEEYLQKFTLVIATEENYERTAKVNDVCRKHHIPFISCA 145 (198)
T ss_pred eccccc-chhhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 2 321 123456778899999999743 334567789999999988874
No 191
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0034 Score=68.48 Aligned_cols=78 Identities=17% Similarity=0.253 Sum_probs=63.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC--eeEEEeecCCCCchHHHhhcc-------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR--VEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~--v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
.+.++++|.| .|.+|+.+++.|+++ +++|++.+|+.+..+.+.+..++ +..+.+|+.| ++.+.++++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEA-GARVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVERFG 85 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence 4568999999 699999999999986 56899999999888877765543 4778899998 777776654
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
++|+||++...
T Consensus 86 ~~d~vi~~ag~ 96 (264)
T PRK12829 86 GLDVLVNNAGI 96 (264)
T ss_pred CCCEEEECCCC
Confidence 58999999853
No 192
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=96.95 E-value=0.0034 Score=70.00 Aligned_cols=75 Identities=17% Similarity=0.350 Sum_probs=56.1
Q ss_pred eEEEEc-CchhHHHHHHHHHhCC-CCeEEEEeCCH--HHHHHHHHH--cCCeeEEEeecCCCCchHHHhhccC--CcEEE
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDE-NIHITLGSLLK--EDIDKVTNE--FGRVEATLIDVNNGGSDNLSGLVRS--ADLVV 638 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~-~~~VtVadR~~--ekAe~La~~--~~~v~~v~lDV~D~~~e~L~elI~~--~DVVI 638 (1201)
+|+|.| +|++|+.+++.|.+.+ +++|++.+|.. .+.+.+... .+++..+..|+.| .+.+.+++++ +|+||
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~d~vi 78 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGD--RELVSRLFTEHQPDAVV 78 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcC--HHHHHHHHhhcCCCEEE
Confidence 589999 6999999999998864 47888887632 122222211 1357788899998 8889999887 89999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
+|...
T Consensus 79 ~~a~~ 83 (317)
T TIGR01181 79 HFAAE 83 (317)
T ss_pred Ecccc
Confidence 99853
No 193
>PRK06153 hypothetical protein; Provisional
Probab=96.94 E-value=0.0039 Score=73.52 Aligned_cols=98 Identities=10% Similarity=0.163 Sum_probs=66.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC---------------H-------HHHHHHHHHc----CCeeEEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL---------------K-------EDIDKVTNEF----GRVEATL 616 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~---------------~-------ekAe~La~~~----~~v~~v~ 616 (1201)
.+..+|+|+|+|.+|..+++.|++.+--+++++|.+ . .|++.+++.+ +++.+..
T Consensus 174 L~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~I~~~~ 253 (393)
T PRK06153 174 LEGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRGIVPHP 253 (393)
T ss_pred HhhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCeEEEEe
Confidence 457899999999999999999999876678888754 1 2344444333 2344444
Q ss_pred eecCCCCchHHHhhccCCcEEEEcCCCcc-cHHHHHHHHHcCCeEEEcc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLLPYNL-HHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~lP~~~-h~~VakacIeaGkh~VD~S 664 (1201)
..+ + .+.+. .+.++|+||.|+.... ...+.+.|.+.++.+||..
T Consensus 254 ~~I-~--~~n~~-~L~~~DiV~dcvDn~~aR~~ln~~a~~~gIP~Id~G 298 (393)
T PRK06153 254 EYI-D--EDNVD-ELDGFTFVFVCVDKGSSRKLIVDYLEALGIPFIDVG 298 (393)
T ss_pred ecC-C--HHHHH-HhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEee
Confidence 344 3 34444 5688999999996433 2445667777777777754
No 194
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.94 E-value=0.0038 Score=68.22 Aligned_cols=75 Identities=13% Similarity=0.212 Sum_probs=61.5
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------CCcE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------SADL 636 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~~DV 636 (1201)
|+|+|.| +|++|..+++.|.+. +.+|++.+|+.++++.+.... .++..+.+|+.| .+++.++++ +.|+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 5799999 699999999999986 578999999999888776654 257788999998 777766654 6899
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 78 vi~~ag~ 84 (248)
T PRK10538 78 LVNNAGL 84 (248)
T ss_pred EEECCCc
Confidence 9999753
No 195
>PRK04148 hypothetical protein; Provisional
Probab=96.94 E-value=0.005 Score=62.96 Aligned_cols=91 Identities=16% Similarity=0.292 Sum_probs=71.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.+||++||+| .|..++..|.+. +++|+..|.+++..+..... .+.++..|+.+ ++ -++-+++|+|.++=|+
T Consensus 16 ~~~kileIG~G-fG~~vA~~L~~~-G~~ViaIDi~~~aV~~a~~~--~~~~v~dDlf~--p~--~~~y~~a~liysirpp 87 (134)
T PRK04148 16 KNKKIVELGIG-FYFKVAKKLKES-GFDVIVIDINEKAVEKAKKL--GLNAFVDDLFN--PN--LEIYKNAKLIYSIRPP 87 (134)
T ss_pred cCCEEEEEEec-CCHHHHHHHHHC-CCEEEEEECCHHHHHHHHHh--CCeEEECcCCC--CC--HHHHhcCCEEEEeCCC
Confidence 34789999999 888899999976 68999999999987766543 57888999987 32 2344689999999854
Q ss_pred -cccHHHHHHHHHcCCeEEE
Q psy12817 644 -NLHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 644 -~~h~~VakacIeaGkh~VD 662 (1201)
.+|+.+++.|-+-|++++-
T Consensus 88 ~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 88 RDLQPFILELAKKINVPLII 107 (134)
T ss_pred HHHHHHHHHHHHHcCCCEEE
Confidence 5788888888777777554
No 196
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=96.92 E-value=0.0033 Score=73.71 Aligned_cols=74 Identities=18% Similarity=0.281 Sum_probs=56.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+.|||+|.| +|++|+.++++|.++ +++|++++|..... +.......+.+..|+.| .+.+.++++++|+||++..
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~-G~~V~~v~r~~~~~--~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAE-GHYIIASDWKKNEH--MSEDMFCHEFHLVDLRV--MENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhC-CCEEEEEEeccccc--cccccccceEEECCCCC--HHHHHHHHhCCCEEEEccc
Confidence 468999999 699999999999986 57899998864321 11111124667789987 7788888889999999984
No 197
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.92 E-value=0.0065 Score=65.68 Aligned_cols=99 Identities=15% Similarity=0.155 Sum_probs=69.0
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHH----HHHHcCCeeEEE--
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDK----VTNEFGRVEATL-- 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~----La~~~~~v~~v~-- 616 (1201)
..+..||+|+|+|.+|..+++.|+..+--+++++|.+. .|++. +.+..|.++...
T Consensus 18 ~L~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~ 97 (197)
T cd01492 18 RLRSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT 97 (197)
T ss_pred HHHhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence 35578999999999999999999998766799887541 13333 333335544322
Q ss_pred eecCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
..+. +...++++++|+||+|.+. .....+.+.|.+.+++++...
T Consensus 98 ~~~~----~~~~~~~~~~dvVi~~~~~~~~~~~ln~~c~~~~ip~i~~~ 142 (197)
T cd01492 98 DDIS----EKPEEFFSQFDVVVATELSRAELVKINELCRKLGVKFYATG 142 (197)
T ss_pred cCcc----ccHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 2222 2345677899999999853 334667889999999998874
No 198
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.91 E-value=0.003 Score=71.31 Aligned_cols=80 Identities=18% Similarity=0.314 Sum_probs=66.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----CeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
..++.++|-| ++.+|..+++.|+++ +++|+++.|+.++++++++++. .+..+.+|+++ ++++..+..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~-g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~--~~~~~~l~~~l~~ 80 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARR-GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSD--PEALERLEDELKE 80 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC--hhHHHHHHHHHHh
Confidence 4578999999 699999999999997 5789999999999999998763 25688899998 777766543
Q ss_pred ---CCcEEEEcCCCcc
Q psy12817 633 ---SADLVVSLLPYNL 645 (1201)
Q Consensus 633 ---~~DVVIs~lP~~~ 645 (1201)
+.|++||+..+..
T Consensus 81 ~~~~IdvLVNNAG~g~ 96 (265)
T COG0300 81 RGGPIDVLVNNAGFGT 96 (265)
T ss_pred cCCcccEEEECCCcCC
Confidence 4899999998654
No 199
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0035 Score=68.82 Aligned_cols=75 Identities=17% Similarity=0.268 Sum_probs=62.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccC-------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRS------- 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~------- 633 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+..+ ++..+.+|++| .+++.+++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ-GATLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence 57899999 799999999999987 5789999999998887766543 46788999998 7777776543
Q ss_pred CcEEEEcCC
Q psy12817 634 ADLVVSLLP 642 (1201)
Q Consensus 634 ~DVVIs~lP 642 (1201)
.|++|++..
T Consensus 79 id~lv~~ag 87 (257)
T PRK07024 79 PDVVIANAG 87 (257)
T ss_pred CCEEEECCC
Confidence 699999975
No 200
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.90 E-value=0.0031 Score=68.17 Aligned_cols=77 Identities=17% Similarity=0.255 Sum_probs=62.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhcc-------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+.++|+|+| +|.+|+.+++.|+++ +.+|++.+|+.++.+.+...+. ++.++.+|+.| .+.+.++++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 80 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAE-GARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD--EADVEAAVAAALERFG 80 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 457999999 699999999999987 5789999999988877665542 36788899998 888877765
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 81 ~~d~vi~~ag~ 91 (251)
T PRK07231 81 SVDILVNNAGT 91 (251)
T ss_pred CCCEEEECCCC
Confidence 46999999854
No 201
>PRK06194 hypothetical protein; Provisional
Probab=96.90 E-value=0.0035 Score=69.73 Aligned_cols=77 Identities=13% Similarity=0.219 Sum_probs=62.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS----- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~----- 633 (1201)
++++|+|.| +|++|+.+++.|+++ +.+|++++|+.+.+++..... .++..+..|++| .+.+.+++++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAAL-GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD--AAQVEALADAALERF 81 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 458899999 799999999999987 578999999988777665543 246678899998 7888877763
Q ss_pred --CcEEEEcCCC
Q psy12817 634 --ADLVVSLLPY 643 (1201)
Q Consensus 634 --~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 82 g~id~vi~~Ag~ 93 (287)
T PRK06194 82 GAVHLLFNNAGV 93 (287)
T ss_pred CCCCEEEECCCC
Confidence 6999999854
No 202
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.89 E-value=0.0068 Score=68.51 Aligned_cols=93 Identities=16% Similarity=0.161 Sum_probs=64.7
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
+||+|||+|.||..++..|.+. +++|++.|++.+.++++...- .+.. ..+ .. +.++++|+||.|+|...
T Consensus 1 m~I~IIG~G~mG~sla~~L~~~-g~~V~~~d~~~~~~~~a~~~g-~~~~----~~~----~~-~~~~~aDlVilavp~~~ 69 (279)
T PRK07417 1 MKIGIVGLGLIGGSLGLDLRSL-GHTVYGVSRRESTCERAIERG-LVDE----AST----DL-SLLKDCDLVILALPIGL 69 (279)
T ss_pred CeEEEEeecHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCC-Cccc----ccC----CH-hHhcCCCEEEEcCCHHH
Confidence 4899999999999999999876 578999999998887765431 1110 111 12 34678999999999766
Q ss_pred cHHHHHHH---HHcCCeEEEccCChHH
Q psy12817 646 HHHVAEFC---IQHGKNLVTASYLSPE 669 (1201)
Q Consensus 646 h~~Vakac---IeaGkh~VD~Syvs~e 669 (1201)
...+.+.. +..++-+.|.+-+...
T Consensus 70 ~~~~~~~l~~~l~~~~ii~d~~Svk~~ 96 (279)
T PRK07417 70 LLPPSEQLIPALPPEAIVTDVGSVKAP 96 (279)
T ss_pred HHHHHHHHHHhCCCCcEEEeCcchHHH
Confidence 55554433 3445667777655443
No 203
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=96.89 E-value=0.0025 Score=73.58 Aligned_cols=80 Identities=20% Similarity=0.236 Sum_probs=62.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+|.||.|+| +|++|+.+++.|.+++.++++-...+..+ +..+ . .+..+++|+|+.|+|
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~----------------~~~~--~---~~~~~~~DvvFlalp 59 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK----------------DAAA--R---RELLNAADVAILCLP 59 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC----------------cccC--c---hhhhcCCCEEEECCC
Confidence 368999999 79999999999999998886544433221 0111 1 123457999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEcc
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~S 664 (1201)
.....+++..+.+.|+.+||.|
T Consensus 60 ~~~s~~~~~~~~~~g~~VIDlS 81 (313)
T PRK11863 60 DDAAREAVALIDNPATRVIDAS 81 (313)
T ss_pred HHHHHHHHHHHHhCCCEEEECC
Confidence 9888889999999999999997
No 204
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0032 Score=69.60 Aligned_cols=77 Identities=17% Similarity=0.232 Sum_probs=62.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
++++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.....++..+.+|++| .+++.++++ ..|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 80 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAAL-GARVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPID 80 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 357899999 699999999999986 578999999999988887766557888999998 777655443 469
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
++|++...
T Consensus 81 ~li~~ag~ 88 (273)
T PRK07825 81 VLVNNAGV 88 (273)
T ss_pred EEEECCCc
Confidence 99999753
No 205
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=96.88 E-value=0.0039 Score=70.44 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=69.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC---CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN---IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~---~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
|+||.+||+|.||++++.-|.+.+. .+|.+.+|+.++++.+++.|+ +.. .. ...+++.++|+|+-|+
T Consensus 1 ~~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g-~~~----~~-----~~~~~~~~advv~Lav 70 (266)
T COG0345 1 MMKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYG-VVT----TT-----DNQEAVEEADVVFLAV 70 (266)
T ss_pred CceEEEEccCHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcC-Ccc----cC-----cHHHHHhhCCEEEEEe
Confidence 5899999999999999999998762 579999999999998999884 331 22 2455667899999999
Q ss_pred CCcccHHHHHHH--HHcCCeEEEcc
Q psy12817 642 PYNLHHHVAEFC--IQHGKNLVTAS 664 (1201)
Q Consensus 642 P~~~h~~Vakac--IeaGkh~VD~S 664 (1201)
.+....++...+ +..++.+|.+.
T Consensus 71 KPq~~~~vl~~l~~~~~~~lvISia 95 (266)
T COG0345 71 KPQDLEEVLSKLKPLTKDKLVISIA 95 (266)
T ss_pred ChHhHHHHHHHhhcccCCCEEEEEe
Confidence 655556666555 34677777763
No 206
>PRK06813 homoserine dehydrogenase; Validated
Probab=96.88 E-value=0.0062 Score=71.25 Aligned_cols=143 Identities=18% Similarity=0.178 Sum_probs=84.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC-------C--Ce-EEEEeCCHHHHH-------HHHHHcCCeeEEEe-e-cCCCCch
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE-------N--IH-ITLGSLLKEDID-------KVTNEFGRVEATLI-D-VNNGGSD 625 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~-------~--~~-VtVadR~~ekAe-------~La~~~~~v~~v~l-D-V~D~~~e 625 (1201)
+.+|+|+|+|.||+.+++.|.++. + ++ +.|++++..... .+.+. .. ..... + ..+ +.+
T Consensus 2 ~i~I~liG~G~VG~~~~~~L~~~~~~l~~~~g~~l~v~~i~~~~~~~~~~~gi~~~~~l~~-~~-~~~~~~~~~~~-~~~ 78 (346)
T PRK06813 2 KIKVVLSGYGTVGREFIKLLNEKYLYINETYGIDLVVSGVLGRNVAIHNEDGLSIHHLLRY-GG-GSCAIEKYIEH-HPE 78 (346)
T ss_pred eeEEEEEecChhHHHHHHHHHHhHHHHHHhcCCcEEEEEEEecchhhccccCCChhhhhhc-cc-cccchhhhhcc-ChH
Confidence 479999999999999999986542 2 33 335566543222 11100 00 00000 0 000 011
Q ss_pred HHHhhcc--CCcEEEEcCCCcc-----cHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEecccc---Cch
Q psy12817 626 NLSGLVR--SADLVVSLLPYNL-----HHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGL---DPG 693 (1201)
Q Consensus 626 ~L~elI~--~~DVVIs~lP~~~-----h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~Gl---DPG 693 (1201)
.+ +.. +.|+||.|+|..+ ....++.|+++|+|+|++. .++....+|.+.|+++|+.+.-|.-+ -|=
T Consensus 79 ~~--~~~~~~~dVvVe~T~s~~~~~e~a~~~~~~aL~~G~hVVTANK~~la~~~~eL~~lA~~~g~~~~yEasVggGiPi 156 (346)
T PRK06813 79 ER--ATDNISGTVLVESTVTNLKDGNPGKQYIKQAIEKKMDIVAISKGALVTNWREINEAAKIANVRIRYSGATAAALPT 156 (346)
T ss_pred HH--hcCCCCCCEEEECCCCccCCchHHHHHHHHHHHCCCeEEcCCcHHHhccHHHHHHHHHHcCCeEEEeeeeeeccch
Confidence 11 111 5899999998542 3567899999999999985 34555678888899999999877533 243
Q ss_pred hHHHHHHHHHHHhhhcCCcEEEEEee
Q psy12817 694 IDHLLAMECIDAAHLNGGKVESFVSY 719 (1201)
Q Consensus 694 IdhmlA~~~idei~~~ggkV~sf~s~ 719 (1201)
|+.+ +....|.+|.++.-.
T Consensus 157 I~~l-------~~~~~g~~I~~i~GI 175 (346)
T PRK06813 157 LDIG-------QFSLAGCHIEKIEGI 175 (346)
T ss_pred HHHH-------hhhcccCcEEEEEEE
Confidence 3332 112245666666543
No 207
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.88 E-value=0.0033 Score=71.44 Aligned_cols=76 Identities=14% Similarity=0.165 Sum_probs=60.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH------cCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE------FGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~------~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
..++|+|.| +|++|+.+++.|+++ +++|++..|+.++++.+... .++++.+..|+.| .+.+.++++++|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~ 80 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLR-GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE--ESSFEQAIEGCDA 80 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCC--cchHHHHHhCCCE
Confidence 357999999 799999999999987 57888888876654432211 1357888899998 7889999999999
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
||++..
T Consensus 81 vih~A~ 86 (322)
T PLN02986 81 VFHTAS 86 (322)
T ss_pred EEEeCC
Confidence 999985
No 208
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.87 E-value=0.0048 Score=73.31 Aligned_cols=99 Identities=18% Similarity=0.170 Sum_probs=69.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHH----HHcCCeeE--EEe
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVT----NEFGRVEA--TLI 617 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La----~~~~~v~~--v~l 617 (1201)
.+..||+|+|+|.+|..++.+|++.+--+++++|.+. .|++.++ +..|.++. ...
T Consensus 40 L~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 119 (392)
T PRK07878 40 LKNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF 119 (392)
T ss_pred HhcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence 4578999999999999999999987655688877532 1333333 22355443 333
Q ss_pred ecCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 618 DVNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 618 DV~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
.+. .+...++++++|+||+|+-. .....+.++|.+.++.+|..+
T Consensus 120 ~i~---~~~~~~~~~~~D~Vvd~~d~~~~r~~ln~~~~~~~~p~v~~~ 164 (392)
T PRK07878 120 RLD---PSNAVELFSQYDLILDGTDNFATRYLVNDAAVLAGKPYVWGS 164 (392)
T ss_pred cCC---hhHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 333 34567888999999999843 334557789999999988764
No 209
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.86 E-value=0.0039 Score=68.18 Aligned_cols=78 Identities=17% Similarity=0.227 Sum_probs=62.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC----CeeEEEeecCCCCchHHHhhccC----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG----RVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~----~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +++|++.+|+.++++++.+.+. ++..+.+|+.| .+.+++++++
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 84 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQA-GAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAE 84 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHh
Confidence 4568999999 699999999999986 5789999999988776655442 36678889998 7778777653
Q ss_pred ---CcEEEEcCCC
Q psy12817 634 ---ADLVVSLLPY 643 (1201)
Q Consensus 634 ---~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 85 ~~~~d~li~~ag~ 97 (255)
T PRK07523 85 IGPIDILVNNAGM 97 (255)
T ss_pred cCCCCEEEECCCC
Confidence 7999999753
No 210
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0045 Score=68.62 Aligned_cols=76 Identities=22% Similarity=0.326 Sum_probs=62.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+|+|+|.| +|++|+.+++.|++. +.+|++.+|+.++++.+....+ ++..+.+|++| .+.+.++++ +.|
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLAR-GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRID 78 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 36899999 799999999999986 5689999999988887766543 57788999998 777776654 479
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 79 ~vi~~ag~ 86 (276)
T PRK06482 79 VVVSNAGY 86 (276)
T ss_pred EEEECCCC
Confidence 99999754
No 211
>TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II. All of the members of the seed are characterized. See, for instance. This model is very solid, there are no species falling between trusted and noise at this time. The closest relatives scoring in the noise are the class I GAPDH's.
Probab=96.86 E-value=0.0052 Score=71.46 Aligned_cols=92 Identities=14% Similarity=0.230 Sum_probs=68.7
Q ss_pred EEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEE-------------eecCCCCchHHHhhccC
Q psy12817 568 VLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATL-------------IDVNNGGSDNLSGLVRS 633 (1201)
Q Consensus 568 VLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~-------------lDV~D~~~e~L~elI~~ 633 (1201)
|+|+|+|++|+.+++.+.+.++.+ |.|.|.+++.+..++..+ +...+. +.+. ..+++++.+
T Consensus 1 VaInG~GrIGr~varav~~~~d~elVaVnD~~~~~~a~lA~~l-gyds~~~~~~~~~~~~~~~l~v~----g~~eeLl~~ 75 (333)
T TIGR01546 1 VGVNGYGTIGKRVADAVTKQDDMKLVGVTKTSPDFEAYRAKEL-GIPVYAASEEFIPRFEEAGIEVA----GTLEDLLEK 75 (333)
T ss_pred CEEECCcHHHHHHHHHHhhCCCcEEEEEecCChHHHHHHHHHh-CCCEEeecCCcceEeccCceEec----CCHHHHhhc
Confidence 689999999999999988778888 557888888777777654 211111 1112 236677789
Q ss_pred CcEEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 634 ADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 634 ~DVVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|+|+.|+|...|..-++..+++|+.-|=.+
T Consensus 76 vDiVve~Tp~~~~~~na~~~~~~GakaVl~~ 106 (333)
T TIGR01546 76 VDIVVDATPGGIGAKNKPLYEKAGVKAIFQG 106 (333)
T ss_pred CCEEEECCCCCCChhhHHHHHhCCcCEEEEC
Confidence 9999999999999888888888887655544
No 212
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.85 E-value=0.0031 Score=71.60 Aligned_cols=75 Identities=15% Similarity=0.165 Sum_probs=59.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH------cCCeeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE------FGRVEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~------~~~v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
.|+|+|.| +|++|+.+++.|++. +++|++.+|+.++.+..... .++++.+..|+.| .+.+.++++++|+|
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~d~v 81 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFR-GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLD--EGSFELAIDGCETV 81 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCC--chHHHHHHcCCCEE
Confidence 58999999 799999999999986 57888888886654332211 1247788899998 78899999999999
Q ss_pred EEcCC
Q psy12817 638 VSLLP 642 (1201)
Q Consensus 638 Is~lP 642 (1201)
|++..
T Consensus 82 ih~A~ 86 (325)
T PLN02989 82 FHTAS 86 (325)
T ss_pred EEeCC
Confidence 99985
No 213
>PLN02253 xanthoxin dehydrogenase
Probab=96.85 E-value=0.0055 Score=68.07 Aligned_cols=76 Identities=18% Similarity=0.243 Sum_probs=62.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.+..+++.+.. .++..+.+|+.| .+.+.++++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKH-GAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 457899999 799999999999986 578999999988777766554 247788999998 788877765
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 94 ~id~li~~Ag 103 (280)
T PLN02253 94 TLDIMVNNAG 103 (280)
T ss_pred CCCEEEECCC
Confidence 5899999974
No 214
>PRK05472 redox-sensing transcriptional repressor Rex; Provisional
Probab=96.85 E-value=0.0022 Score=69.78 Aligned_cols=92 Identities=22% Similarity=0.356 Sum_probs=66.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHH-hCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLH-RDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La-~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs 639 (1201)
..++|+|+|+|.+|+.+++++. ...+++ +.++|++++++.... .+.. +.. .+.+.+++++ +|+|+.
T Consensus 83 ~~~rV~IIGaG~iG~~l~~~~~~~~~g~~ivgv~D~d~~~~~~~i---~g~~-----v~~--~~~l~~li~~~~iD~ViI 152 (213)
T PRK05472 83 RTWNVALVGAGNLGRALLNYNGFEKRGFKIVAAFDVDPEKIGTKI---GGIP-----VYH--IDELEEVVKENDIEIGIL 152 (213)
T ss_pred CCcEEEEECCCHHHHHHHHhhhcccCCcEEEEEEECChhhcCCEe---CCeE-----EcC--HHHHHHHHHHCCCCEEEE
Confidence 3579999999999999998753 345677 457888876553221 1222 122 4567777764 999999
Q ss_pred cCCCcccHHHHHHHHHcCC-eEEEccC
Q psy12817 640 LLPYNLHHHVAEFCIQHGK-NLVTASY 665 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGk-h~VD~Sy 665 (1201)
|+|...|.+++..|+++|+ ++++.+.
T Consensus 153 a~P~~~~~~i~~~l~~~Gi~~il~~~p 179 (213)
T PRK05472 153 TVPAEAAQEVADRLVEAGIKGILNFAP 179 (213)
T ss_pred eCCchhHHHHHHHHHHcCCCEEeecCc
Confidence 9999999999999999995 6666654
No 215
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.005 Score=68.59 Aligned_cols=76 Identities=18% Similarity=0.195 Sum_probs=62.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+++|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++++.+....+ ++..+.+|+.| .+.+.++++ ..|
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAA-GHRVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhC-cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCCC
Confidence 57899999 699999999999986 5789999999998887766542 47778899998 777777665 479
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999753
No 216
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.84 E-value=0.0044 Score=70.67 Aligned_cols=77 Identities=16% Similarity=0.215 Sum_probs=63.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
..+++|+|.| +|.+|..+++.|++.+ .+|++++|+.++++++.... .++..+.+|++| .+.+.+++++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 80 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRG-WHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRAL 80 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHh
Confidence 3568899999 7999999999999874 78999999999887776554 246788899998 7777776653
Q ss_pred ---CcEEEEcCC
Q psy12817 634 ---ADLVVSLLP 642 (1201)
Q Consensus 634 ---~DVVIs~lP 642 (1201)
.|+||++..
T Consensus 81 ~~~iD~li~nAg 92 (322)
T PRK07453 81 GKPLDALVCNAA 92 (322)
T ss_pred CCCccEEEECCc
Confidence 899999975
No 217
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.005 Score=69.69 Aligned_cols=77 Identities=18% Similarity=0.292 Sum_probs=63.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
..++|+|.| +|.+|+.+++.|+++ +.+|++++|+.++++++.+.. ..+..+.+|+.| .+.+.++++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~-G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARR-GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD--LDAVDALVADVEKRI 115 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 348899999 699999999999986 579999999998887776543 235678899998 777777766
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 116 g~id~li~~AG~ 127 (293)
T PRK05866 116 GGVDILINNAGR 127 (293)
T ss_pred CCCCEEEECCCC
Confidence 68999999753
No 218
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.0043 Score=68.52 Aligned_cols=78 Identities=14% Similarity=0.229 Sum_probs=63.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.++++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++..... ++.++.+|++| .+++.++++ .
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAA-GARVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGR 80 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCC
Confidence 3468999999 699999999999986 5799999999988888776653 47788999998 777776665 4
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 81 id~lv~~ag~ 90 (261)
T PRK08265 81 VDILVNLACT 90 (261)
T ss_pred CCEEEECCCC
Confidence 6999999753
No 219
>PLN00198 anthocyanidin reductase; Provisional
Probab=96.83 E-value=0.0035 Score=71.79 Aligned_cols=77 Identities=17% Similarity=0.342 Sum_probs=59.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-----HHcCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVT-----NEFGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La-----~~~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.++++|+|.| +|++|+.+++.|.+. +++|++.+|+.+...... ...+++..+..|+.| .+.+.++++++|+
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~d~ 83 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQK-GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTD--EESFEAPIAGCDL 83 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCC--hHHHHHHHhcCCE
Confidence 4578999999 899999999999987 468877777754332211 112357788899998 7889999999999
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
||++..
T Consensus 84 vih~A~ 89 (338)
T PLN00198 84 VFHVAT 89 (338)
T ss_pred EEEeCC
Confidence 999984
No 220
>PLN00016 RNA-binding protein; Provisional
Probab=96.81 E-value=0.0028 Score=74.27 Aligned_cols=93 Identities=23% Similarity=0.230 Sum_probs=61.1
Q ss_pred ccccCCCeEEEE----c-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH-------H--cCCeeEEEeecCCCCch
Q psy12817 560 IQTEESRNVLLL----G-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTN-------E--FGRVEATLIDVNNGGSD 625 (1201)
Q Consensus 560 ~~~~~mkKVLIL----G-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~-------~--~~~v~~v~lDV~D~~~e 625 (1201)
.....++||+|+ | +|++|+.+++.|.+. +++|++.+|+.+..+.+.. . ..+++.+..|+.|
T Consensus 47 ~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---- 121 (378)
T PLN00016 47 AAAVEKKKVLIVNTNSGGHAFIGFYLAKELVKA-GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---- 121 (378)
T ss_pred hcccccceEEEEeccCCCceeEhHHHHHHHHHC-CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH----
Confidence 335567899999 8 699999999999987 5899999998765432210 1 1247777777754
Q ss_pred HHHhhc--cCCcEEEEcCCCcc--cHHHHHHHHHcCC
Q psy12817 626 NLSGLV--RSADLVVSLLPYNL--HHHVAEFCIQHGK 658 (1201)
Q Consensus 626 ~L~elI--~~~DVVIs~lP~~~--h~~VakacIeaGk 658 (1201)
+.+++ .++|+||++..... ...++++|.++|+
T Consensus 122 -~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gv 157 (378)
T PLN00016 122 -VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGL 157 (378)
T ss_pred -HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 44443 46899999864221 2334444444443
No 221
>PRK09186 flagellin modification protein A; Provisional
Probab=96.81 E-value=0.0047 Score=67.23 Aligned_cols=75 Identities=13% Similarity=0.330 Sum_probs=60.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhccC---
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVRS--- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~~--- 633 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.... + .+.++.+|++| .+++.+++++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEA-GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 358999999 699999999999986 578999999998887665443 1 24456889998 7888777764
Q ss_pred ----CcEEEEcC
Q psy12817 634 ----ADLVVSLL 641 (1201)
Q Consensus 634 ----~DVVIs~l 641 (1201)
.|+||++.
T Consensus 80 ~~~~id~vi~~A 91 (256)
T PRK09186 80 KYGKIDGAVNCA 91 (256)
T ss_pred HcCCccEEEECC
Confidence 79999997
No 222
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=96.80 E-value=0.0038 Score=65.63 Aligned_cols=77 Identities=19% Similarity=0.238 Sum_probs=54.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.|+|+|||+|..|++.+..|.+. +++|+|..|..++-.+.++.- +.+ + ..+.++++++|+|+.++|.
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDS-G~~V~Vglr~~s~s~~~A~~~-Gf~-----v-----~~~~eAv~~aDvV~~L~PD 70 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDS-GVNVIVGLREGSASWEKAKAD-GFE-----V-----MSVAEAVKKADVVMLLLPD 70 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHC-C-EEEEEE-TTCHHHHHHHHT-T-E-----C-----CEHHHHHHC-SEEEE-S-H
T ss_pred CCCEEEEECCChHHHHHHHHHHhC-CCCEEEEecCCCcCHHHHHHC-CCe-----e-----ccHHHHHhhCCEEEEeCCh
Confidence 578999999999999999999876 689999998877554445443 433 2 2467788899999999998
Q ss_pred cccHHHHHH
Q psy12817 644 NLHHHVAEF 652 (1201)
Q Consensus 644 ~~h~~Vaka 652 (1201)
..+.++-+.
T Consensus 71 ~~q~~vy~~ 79 (165)
T PF07991_consen 71 EVQPEVYEE 79 (165)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888777543
No 223
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.80 E-value=0.0071 Score=69.31 Aligned_cols=76 Identities=24% Similarity=0.263 Sum_probs=53.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH-------c--CCe-e-------EEEeecCCCCchHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE-------F--GRV-E-------ATLIDVNNGGSDNL 627 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~-------~--~~v-~-------~v~lDV~D~~~e~L 627 (1201)
+++|+|||+|.||..++..|++. +++|++.|++++.+++.... . .+. . .-.+.+. .++
T Consensus 2 ~~~V~VIG~G~mG~~iA~~la~~-G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~----~~~ 76 (308)
T PRK06129 2 MGSVAIIGAGLIGRAWAIVFARA-GHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVT----DSL 76 (308)
T ss_pred CcEEEEECccHHHHHHHHHHHHC-CCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEE----CcH
Confidence 46899999999999999999987 57999999998876653211 0 010 0 0001122 246
Q ss_pred HhhccCCcEEEEcCCCcc
Q psy12817 628 SGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 628 ~elI~~~DVVIs~lP~~~ 645 (1201)
.+.++++|+|+.|+|...
T Consensus 77 ~~a~~~ad~Vi~avpe~~ 94 (308)
T PRK06129 77 ADAVADADYVQESAPENL 94 (308)
T ss_pred HHhhCCCCEEEECCcCCH
Confidence 677889999999999763
No 224
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.78 E-value=0.0088 Score=68.33 Aligned_cols=77 Identities=21% Similarity=0.413 Sum_probs=55.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH----cCCeeE--------EEeecCCCCchHHHhhc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE----FGRVEA--------TLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~----~~~v~~--------v~lDV~D~~~e~L~elI 631 (1201)
.++||.|||+|.||..++..|++. +++|+++|++.++++++.+. .+.... ..+... .++.+.+
T Consensus 3 ~~~~I~vIGaG~mG~~iA~~l~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~ 77 (311)
T PRK06130 3 PIQNLAIIGAGTMGSGIAALFARK-GLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRME----AGLAAAV 77 (311)
T ss_pred CccEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEe----CCHHHHh
Confidence 357999999999999999999875 57899999999888776542 110000 001112 2355667
Q ss_pred cCCcEEEEcCCCcc
Q psy12817 632 RSADLVVSLLPYNL 645 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~ 645 (1201)
+++|+||.|+|...
T Consensus 78 ~~aDlVi~av~~~~ 91 (311)
T PRK06130 78 SGADLVIEAVPEKL 91 (311)
T ss_pred ccCCEEEEeccCcH
Confidence 89999999998764
No 225
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=96.77 E-value=0.0063 Score=69.77 Aligned_cols=96 Identities=20% Similarity=0.245 Sum_probs=63.7
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC---------------------HHHHH----HHHHHcCCeeE--EEeec
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLL---------------------KEDID----KVTNEFGRVEA--TLIDV 619 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~---------------------~ekAe----~La~~~~~v~~--v~lDV 619 (1201)
||+|+|+|.+|..++++|++.+--+++++|.+ ..|++ ++.+..|.++. +...+
T Consensus 1 kVLIvGaGGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~I 80 (307)
T cd01486 1 KCLLLGAGTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLSI 80 (307)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeeec
Confidence 69999999999999999999865567777632 11232 23333455443 32222
Q ss_pred ---------------CCCCchHHHhhccCCcEEEEcCCCcc-cHHHHHHHHHcCCeEEEc
Q psy12817 620 ---------------NNGGSDNLSGLVRSADLVVSLLPYNL-HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 620 ---------------~D~~~e~L~elI~~~DVVIs~lP~~~-h~~VakacIeaGkh~VD~ 663 (1201)
.. +.+.+.++++++|+|+.|+...- ...+...|.+.++.+++.
T Consensus 81 pmpgh~~~~~~~~~~~~-~~~~l~~li~~~DvV~d~tDn~esR~L~~~~~~~~~k~~I~a 139 (307)
T cd01486 81 PMPGHPISESEVPSTLK-DVKRLEELIKDHDVIFLLTDSRESRWLPTLLSAAKNKLVINA 139 (307)
T ss_pred ccccccccccccccccc-CHHHHHHHHhhCCEEEECCCCHHHHHHHHHHHHHhCCcEEEE
Confidence 11 25678899999999999995432 344566777777777764
No 226
>PLN02240 UDP-glucose 4-epimerase
Probab=96.76 E-value=0.011 Score=67.64 Aligned_cols=77 Identities=17% Similarity=0.260 Sum_probs=57.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH----HHHHHHHH----cCCeeEEEeecCCCCchHHHhhcc--
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE----DIDKVTNE----FGRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e----kAe~La~~----~~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
++++|+|.| +|++|+.+++.|.+. +.+|++.+|... ..+++... .++++.+..|+.| .+.+.++++
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~l~~~~~~~ 80 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLA-GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRD--KEALEKVFAST 80 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCC--HHHHHHHHHhC
Confidence 458999999 699999999999986 478988886421 12222221 1257788899998 888888876
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
++|.||+|...
T Consensus 81 ~~d~vih~a~~ 91 (352)
T PLN02240 81 RFDAVIHFAGL 91 (352)
T ss_pred CCCEEEEcccc
Confidence 58999999753
No 227
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.76 E-value=0.0083 Score=67.52 Aligned_cols=94 Identities=11% Similarity=0.113 Sum_probs=64.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
+||+|||+|.||..++..|.+.+. .+|++.||++++++.+.+ . ++. |... ...++. ++|+||.|+|..
T Consensus 1 m~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~-~-g~~----~~~~----~~~~~~-~aD~Vilavp~~ 69 (275)
T PRK08507 1 MKIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKALE-L-GLV----DEIV----SFEELK-KCDVIFLAIPVD 69 (275)
T ss_pred CEEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHH-C-CCC----cccC----CHHHHh-cCCEEEEeCcHH
Confidence 489999999999999999987643 468889999988877543 3 221 1111 233333 499999999987
Q ss_pred ccHHHHHHH--HHcCCeEEEccCChHHH
Q psy12817 645 LHHHVAEFC--IQHGKNLVTASYLSPEM 670 (1201)
Q Consensus 645 ~h~~Vakac--IeaGkh~VD~Syvs~e~ 670 (1201)
....+++.. +..++-++|.+-+....
T Consensus 70 ~~~~~~~~l~~l~~~~iv~d~gs~k~~i 97 (275)
T PRK08507 70 AIIEILPKLLDIKENTTIIDLGSTKAKI 97 (275)
T ss_pred HHHHHHHHHhccCCCCEEEECccchHHH
Confidence 665655543 34566677776554443
No 228
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.0057 Score=67.58 Aligned_cols=78 Identities=17% Similarity=0.316 Sum_probs=59.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~~-----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
..++|+|.| +|.+|+.+++.|++.++.+|++.+|+.++ ++++.++. .++..+.+|+.| .+++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~ 84 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD--TDSHPKVIDAAFA 84 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC--hHHHHHHHHHHHh
Confidence 457899999 79999999999998877899999998775 55544332 257788999998 666544433
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|++|++...
T Consensus 85 ~g~id~li~~ag~ 97 (253)
T PRK07904 85 GGDVDVAIVAFGL 97 (253)
T ss_pred cCCCCEEEEeeec
Confidence 68999988754
No 229
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.76 E-value=0.0038 Score=63.32 Aligned_cols=88 Identities=17% Similarity=0.179 Sum_probs=62.2
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCc-ccccccccCcccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGG-YDYQEYNENPSLY 270 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~-f~~~ey~~~pe~y 270 (1201)
++.-.+++|+|+|-+|+.++..+..+|+. .+.++.....+.+.+....++. +... .|
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~---------------~i~i~nRt~~ra~~l~~~~~~~~~~~~-------~~ 66 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAK---------------EITIVNRTPERAEALAEEFGGVNIEAI-------PL 66 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSS---------------EEEEEESSHHHHHHHHHHHTGCSEEEE-------EG
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCC---------------EEEEEECCHHHHHHHHHHcCcccccee-------eH
Confidence 45678999999999999999999999854 4678877777766666655321 2211 12
Q ss_pred cchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhc
Q psy12817 271 RSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKN 306 (1201)
Q Consensus 271 ~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~ 306 (1201)
... .+.++.+|+||||.-.+.. ++++++++.
T Consensus 67 ~~~--~~~~~~~DivI~aT~~~~~---~i~~~~~~~ 97 (135)
T PF01488_consen 67 EDL--EEALQEADIVINATPSGMP---IITEEMLKK 97 (135)
T ss_dssp GGH--CHHHHTESEEEE-SSTTST---SSTHHHHTT
T ss_pred HHH--HHHHhhCCeEEEecCCCCc---ccCHHHHHH
Confidence 111 1356689999999887644 899999877
No 230
>PLN02583 cinnamoyl-CoA reductase
Probab=96.75 E-value=0.013 Score=66.30 Aligned_cols=75 Identities=15% Similarity=0.220 Sum_probs=57.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH--HHHHHHHHc----CCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE--DIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e--kAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
+.++|+|.| +|++|+.+++.|+++ +++|++..|+.+ +........ .++..+..|++| .+.+.+.+.++|.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d--~~~~~~~l~~~d~ 81 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSR-GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLD--YHSILDALKGCSG 81 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCC--HHHHHHHHcCCCE
Confidence 457899999 699999999999986 578988888532 222222222 257788899998 7889999999999
Q ss_pred EEEcC
Q psy12817 637 VVSLL 641 (1201)
Q Consensus 637 VIs~l 641 (1201)
|+.+.
T Consensus 82 v~~~~ 86 (297)
T PLN02583 82 LFCCF 86 (297)
T ss_pred EEEeC
Confidence 99765
No 231
>PRK05717 oxidoreductase; Validated
Probab=96.75 E-value=0.0052 Score=67.27 Aligned_cols=78 Identities=21% Similarity=0.253 Sum_probs=61.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.++|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++..... ++.++.+|++| .+++.++++ .
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGR 84 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCC
Confidence 4568999999 799999999999987 4789999999888777665542 46788999998 676655443 3
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 85 id~li~~ag~ 94 (255)
T PRK05717 85 LDALVCNAAI 94 (255)
T ss_pred CCEEEECCCc
Confidence 6999999853
No 232
>PRK12320 hypothetical protein; Provisional
Probab=96.75 E-value=0.0064 Score=76.89 Aligned_cols=90 Identities=24% Similarity=0.253 Sum_probs=69.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||+|.| +|++|+.+++.|.+. +++|++.+|..... ..++++++..|+.| . .+.+++.++|+||+|.+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~-G~~Vi~ldr~~~~~-----~~~~ve~v~~Dl~d--~-~l~~al~~~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA-GHTVSGIAQHPHDA-----LDPRVDYVCASLRN--P-VLQELAGEADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCEEEEEeCChhhc-----ccCCceEEEccCCC--H-HHHHHhcCCCEEEEcCccC
Confidence 4899999 799999999999886 57899999875431 12467888999987 5 4778888999999999643
Q ss_pred c----------cHHHHHHHHHcCCeEEEcc
Q psy12817 645 L----------HHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 645 ~----------h~~VakacIeaGkh~VD~S 664 (1201)
. ...++++|.++|+.+|-+|
T Consensus 72 ~~~~~~vNv~Gt~nLleAA~~~GvRiV~~S 101 (699)
T PRK12320 72 TSAPGGVGITGLAHVANAAARAGARLLFVS 101 (699)
T ss_pred ccchhhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 1 1346788888888776655
No 233
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0069 Score=65.69 Aligned_cols=77 Identities=19% Similarity=0.325 Sum_probs=62.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|++.+|+.++++...... .++..+.+|++| .+.+.++++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFARE-GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS--AEAVEALVDFVAARWG 80 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHC-CCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 457999999 699999999999987 578999999988776665543 246788899998 778777654
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 81 ~id~vi~~ag~ 91 (252)
T PRK06138 81 RLDVLVNNAGF 91 (252)
T ss_pred CCCEEEECCCC
Confidence 68999999864
No 234
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.74 E-value=0.0071 Score=65.69 Aligned_cols=76 Identities=14% Similarity=0.280 Sum_probs=62.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+++|+|.| +|.+|+.+++.|.++ +.+|++.+|+.++.+++.... .++..+.+|+.| .+.+.++++
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKE-GAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD--EEAINAGIDYAVETFG 80 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 47899999 799999999999986 578999999998877665543 357788999998 777777665
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 57999999853
No 235
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.0083 Score=65.36 Aligned_cols=76 Identities=13% Similarity=0.215 Sum_probs=61.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-CCcEEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR-SADLVV 638 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~-~~DVVI 638 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.... .++..+.+|+.| .+.+.+++. +.|+||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~id~vi 78 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK-GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD--AIDRAQAAEWDVDVLL 78 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC--HHHHHHHhcCCCCEEE
Confidence 46899999 699999999999986 578999999988776665432 247788899998 788887776 799999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 79 ~~ag~ 83 (257)
T PRK09291 79 NNAGI 83 (257)
T ss_pred ECCCc
Confidence 99753
No 236
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.007 Score=65.31 Aligned_cols=76 Identities=16% Similarity=0.225 Sum_probs=63.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc---CCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---SADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---~~DVVIs 639 (1201)
+.++++|.| +|.+|+.+++.|++. +++|++++|+.++++++.... +...+..|++| .+.+.++++ ..|+||+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~~--~~~v~~~~~~~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQR-GARVVAAARNAAALDRLAGET-GCEPLRLDVGD--DAAIRAALAAAGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh-CCeEEEecCCC--HHHHHHHHHHhCCCCEEEE
Confidence 357999999 599999999999987 578999999999888887665 46778899998 777777765 4799999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 9854
No 237
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.005 Score=68.29 Aligned_cols=74 Identities=20% Similarity=0.320 Sum_probs=60.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~DV 636 (1201)
||+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++.+... ++..+.+|++| .+.+.++++ +.|+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~--~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA-GYEVWATARKAEDVEALAAA--GFTAVQLDVND--GAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHC--CCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCE
Confidence 68899999 699999999999876 57899999999887776542 56788899998 777776653 5799
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 76 vi~~ag~ 82 (274)
T PRK05693 76 LINNAGY 82 (274)
T ss_pred EEECCCC
Confidence 9999854
No 238
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.0046 Score=68.98 Aligned_cols=74 Identities=20% Similarity=0.295 Sum_probs=60.4
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--------CCc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--------SAD 635 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--------~~D 635 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++.+... ++..+.+|++| .+++.++++ ..|
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~-G~~Vi~~~r~~~~~~~l~~~--~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id 78 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSD-GWRVFATCRKEEDVAALEAE--GLEAFQLDYAE--PESIAALVAQVLELSGGRLD 78 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHC--CceEEEccCCC--HHHHHHHHHHHHHHcCCCcc
Confidence 57899999 599999999999886 57899999999988877653 57888999998 777665554 369
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 79 ~li~~Ag~ 86 (277)
T PRK05993 79 ALFNNGAY 86 (277)
T ss_pred EEEECCCc
Confidence 99999753
No 239
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.0068 Score=66.31 Aligned_cols=77 Identities=13% Similarity=0.288 Sum_probs=62.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|.+++|+.++++++...+ .++..+.+|++| .+.+.++++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEA-GAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 458899999 599999999999986 578999999998888776553 246678899998 777776654
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 68999999753
No 240
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.72 E-value=0.0042 Score=72.18 Aligned_cols=77 Identities=17% Similarity=0.197 Sum_probs=57.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
..+.++|+|||+|.+|++++..|... +++|++.+++.++..+.+... ++.. . ...++++++|+|+.++
T Consensus 14 ~L~gktIgIIG~GsmG~AlA~~L~~s-G~~Vvv~~r~~~~s~~~A~~~-G~~~-----~-----s~~eaa~~ADVVvLaV 81 (330)
T PRK05479 14 LIKGKKVAIIGYGSQGHAHALNLRDS-GVDVVVGLREGSKSWKKAEAD-GFEV-----L-----TVAEAAKWADVIMILL 81 (330)
T ss_pred hhCCCEEEEEeeHHHHHHHHHHHHHC-CCEEEEEECCchhhHHHHHHC-CCee-----C-----CHHHHHhcCCEEEEcC
Confidence 45678999999999999999999876 578888888766555555543 3331 1 3566778999999999
Q ss_pred CCcccHHHH
Q psy12817 642 PYNLHHHVA 650 (1201)
Q Consensus 642 P~~~h~~Va 650 (1201)
|...+..+.
T Consensus 82 Pd~~~~~V~ 90 (330)
T PRK05479 82 PDEVQAEVY 90 (330)
T ss_pred CHHHHHHHH
Confidence 976655554
No 241
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.72 E-value=0.0053 Score=67.59 Aligned_cols=76 Identities=16% Similarity=0.215 Sum_probs=61.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|++++|+.++++++....+ ++..+.+|+.| .+++.++++ ..
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAE-GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 468999999 699999999999986 5789999999988888776542 46778899998 666666554 46
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|++|++..
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999974
No 242
>PLN02686 cinnamoyl-CoA reductase
Probab=96.72 E-value=0.0057 Score=71.66 Aligned_cols=78 Identities=14% Similarity=0.231 Sum_probs=62.5
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH---------cCCeeEEEeecCCCCchHHHhhc
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE---------FGRVEATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~---------~~~v~~v~lDV~D~~~e~L~elI 631 (1201)
..++|+|+|.| +|++|+.+++.|++. +++|++..|+.++++.+... .+++.++..|+.| .+.+.+++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~-G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d--~~~l~~~i 126 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRH-GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTE--PESLHEAF 126 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCC--HHHHHHHH
Confidence 35678999999 699999999999987 57888888887766555321 0246788899998 88899999
Q ss_pred cCCcEEEEcCC
Q psy12817 632 RSADLVVSLLP 642 (1201)
Q Consensus 632 ~~~DVVIs~lP 642 (1201)
+++|.|+.+..
T Consensus 127 ~~~d~V~hlA~ 137 (367)
T PLN02686 127 DGCAGVFHTSA 137 (367)
T ss_pred HhccEEEecCe
Confidence 99999998753
No 243
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0075 Score=66.08 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=61.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+.++|+|+| +|.+|..+++.|++. +.+|++++|+..+++++.+... ...+.+|+.| .+.+.++++ +.|
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~-~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAE-GATVVVGDIDPEAGKAAADEVG-GLFVPTDVTD--EDAVNALFDTAAETYGSVD 81 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcC-CcEEEeeCCC--HHHHHHHHHHHHHHcCCCC
Confidence 468999999 699999999999986 5789999999988877766553 3678899998 777776665 469
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 82 ~vi~~ag~ 89 (255)
T PRK06057 82 IAFNNAGI 89 (255)
T ss_pred EEEECCCc
Confidence 99998753
No 244
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0044 Score=67.52 Aligned_cols=76 Identities=24% Similarity=0.297 Sum_probs=61.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++|+|.| +|.+|+.+++.|+++ +.+|++++|+.++++++.... .++..+.+|++| .+.++.+++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARA-GADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence 458999999 699999999999987 578999999998877766543 246788999998 777766553
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 81 g~~d~vi~~ag 91 (258)
T PRK07890 81 GRVDALVNNAF 91 (258)
T ss_pred CCccEEEECCc
Confidence 5799999974
No 245
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.71 E-value=0.007 Score=65.32 Aligned_cols=77 Identities=22% Similarity=0.309 Sum_probs=60.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++|+|.| +|.+|+.+++.|+++ +++|++.+|+.++.+.+...+ .++..+.+|+.| .+.+.++++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAAD-GAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRD--RAALKAAVAAGVEDF 81 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 457899999 799999999999987 578999999977665544332 347788899998 778877765
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
.+|+||++...
T Consensus 82 ~~~d~vi~~ag~ 93 (251)
T PRK12826 82 GRLDILVANAGI 93 (251)
T ss_pred CCCCEEEECCCC
Confidence 58999999853
No 246
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.71 E-value=0.0083 Score=65.07 Aligned_cols=76 Identities=17% Similarity=0.181 Sum_probs=52.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC---HH---------------HHHHHHHH----cCCe--eEEEee
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL---KE---------------DIDKVTNE----FGRV--EATLID 618 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~---~e---------------kAe~La~~----~~~v--~~v~lD 618 (1201)
.+.+||+|+|+|.+|..++.+|++.+--+++++|++ .+ +++.+++. .|.+ .....+
T Consensus 19 L~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~ 98 (200)
T TIGR02354 19 LEQATVAICGLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK 98 (200)
T ss_pred HhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence 557899999999999999999999765479999987 22 22222221 2333 333334
Q ss_pred cCCCCchHHHhhccCCcEEEEcC
Q psy12817 619 VNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 619 V~D~~~e~L~elI~~~DVVIs~l 641 (1201)
++ .+.+.++++++|+||.|+
T Consensus 99 i~---~~~~~~~~~~~DlVi~a~ 118 (200)
T TIGR02354 99 IT---EENIDKFFKDADIVCEAF 118 (200)
T ss_pred CC---HhHHHHHhcCCCEEEECC
Confidence 43 356777888899999995
No 247
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.70 E-value=0.013 Score=72.46 Aligned_cols=128 Identities=14% Similarity=0.178 Sum_probs=86.4
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~ 643 (1201)
..+|+|+|+|.+|+.+++.|.++ +.++++.|.|+++++++.+ . +...+..|.+| ++.++++ ++++|.|+.+++.
T Consensus 417 ~~hiiI~G~G~~G~~la~~L~~~-g~~vvvId~d~~~~~~~~~-~-g~~~i~GD~~~--~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 417 CNHALLVGYGRVGSLLGEKLLAA-GIPLVVIETSRTRVDELRE-R-GIRAVLGNAAN--EEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCCEEEECCChHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHH-C-CCeEEEcCCCC--HHHHHhcCccccCEEEEEcCC
Confidence 47899999999999999999876 4789999999999998865 3 68899999998 7777644 6789999999886
Q ss_pred cccH-HHHHHHHHc--CCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhh
Q psy12817 644 NLHH-HVAEFCIQH--GKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAH 707 (1201)
Q Consensus 644 ~~h~-~VakacIea--Gkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~ 707 (1201)
.... .++..+.+. .++.+.-....++.+. .+++|+..+. +| ....+.+..+.+.
T Consensus 492 ~~~~~~iv~~~~~~~~~~~iiar~~~~~~~~~----l~~~Gad~vv----~p--~~~~a~~i~~~l~ 548 (558)
T PRK10669 492 GYEAGEIVASAREKRPDIEIIARAHYDDEVAY----ITERGANQVV----MG--EREIARTMLELLE 548 (558)
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEECCHHHHHH----HHHcCCCEEE----Ch--HHHHHHHHHHHhc
Confidence 5432 333333332 2334433322222222 3567775443 22 3445555555553
No 248
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=96.70 E-value=0.0076 Score=64.43 Aligned_cols=72 Identities=21% Similarity=0.391 Sum_probs=56.3
Q ss_pred EEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCC--cEEEEcCCC
Q psy12817 568 VLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSA--DLVVSLLPY 643 (1201)
Q Consensus 568 VLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~--DVVIs~lP~ 643 (1201)
|+|+| +|++|+.+++.|.+++ .+|+...|............ +++.+..|+.| .+.+.+++++. |+||++...
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g-~~v~~~~~~~~~~~~~~~~~-~~~~~~~dl~~--~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKG-HEVIVLSRSSNSESFEEKKL-NVEFVIGDLTD--KEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-TEEEEEESCSTGGHHHHHHT-TEEEEESETTS--HHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcC-Cccccccccccccccccccc-eEEEEEeeccc--cccccccccccCceEEEEeecc
Confidence 79999 7999999999999875 55666666555443333322 68899999998 88999999877 999999854
No 249
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.70 E-value=0.0033 Score=73.30 Aligned_cols=92 Identities=16% Similarity=0.167 Sum_probs=63.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
+|+||+|+| +|++|+.+++.|.+ .+..++..+......-+.+. +.+ ..+++.+ .+. .+ ++++|+|+.|
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~--~~~---~~l~~~~--~~~-~~-~~~vD~vFla 73 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP--FAG---KNLRVRE--VDS-FD-FSQVQLAFFA 73 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec--cCC---cceEEee--CCh-HH-hcCCCEEEEc
Confidence 468999999 69999999999994 46666554432222112221 222 2234433 222 22 3789999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|.....+++..+.++|+.+||.|
T Consensus 74 ~p~~~s~~~v~~~~~~G~~VIDlS 97 (336)
T PRK05671 74 AGAAVSRSFAEKARAAGCSVIDLS 97 (336)
T ss_pred CCHHHHHHHHHHHHHCCCeEEECc
Confidence 998777889999999999999997
No 250
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.70 E-value=0.0051 Score=71.76 Aligned_cols=93 Identities=16% Similarity=0.218 Sum_probs=66.0
Q ss_pred cCCCeEEEEcC-chhHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLGA-GYVSRPLIEYLHRD-ENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILGA-G~VG~~va~~La~~-~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.+.++|+|+|+ |.||+.+++.|... +..++++++|+.+++..++.++.. .+ ...+.+.+.++|+||++
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-----~~-----i~~l~~~l~~aDiVv~~ 222 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-----GK-----ILSLEEALPEADIVVWV 222 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-----cc-----HHhHHHHHccCCEEEEC
Confidence 56789999997 99999999999864 335799999999999998876532 12 23466788899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+.......+-..-++.+.-++|+++
T Consensus 223 ts~~~~~~I~~~~l~~~~~viDiAv 247 (340)
T PRK14982 223 ASMPKGVEIDPETLKKPCLMIDGGY 247 (340)
T ss_pred CcCCcCCcCCHHHhCCCeEEEEecC
Confidence 8432111111223356666777764
No 251
>PRK14852 hypothetical protein; Provisional
Probab=96.70 E-value=0.0065 Score=78.51 Aligned_cols=101 Identities=16% Similarity=0.200 Sum_probs=72.3
Q ss_pred ccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHH----cCCeeEEE
Q psy12817 560 IQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNE----FGRVEATL 616 (1201)
Q Consensus 560 ~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~----~~~v~~v~ 616 (1201)
++..+..||+|+|+|.+|..++.+|++.+--+++++|.+. .|++.+++. .|.++...
T Consensus 327 Q~kL~~srVlVvGlGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~ 406 (989)
T PRK14852 327 QRRLLRSRVAIAGLGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRS 406 (989)
T ss_pred HHHHhcCcEEEECCcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEE
Confidence 3456689999999999999999999998655677776431 133333332 24444333
Q ss_pred e--ecCCCCchHHHhhccCCcEEEEcCCCcc---cHHHHHHHHHcCCeEEEc
Q psy12817 617 I--DVNNGGSDNLSGLVRSADLVVSLLPYNL---HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 617 l--DV~D~~~e~L~elI~~~DVVIs~lP~~~---h~~VakacIeaGkh~VD~ 663 (1201)
. .+. .+.+.++++++|+||+|+-+.. ...+...|.+.|+.+|+.
T Consensus 407 ~~~~I~---~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP~I~a 455 (989)
T PRK14852 407 FPEGVA---AETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELGIPVITA 455 (989)
T ss_pred EecCCC---HHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcCCCEEEe
Confidence 3 343 5678899999999999996422 256778899999999986
No 252
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=96.70 E-value=0.006 Score=70.51 Aligned_cols=86 Identities=16% Similarity=0.187 Sum_probs=64.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCC----CCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNN----GGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D----~~~e~L~elI~~~DVVIs~ 640 (1201)
|+||.|||+|..|.+++..|++++ ++|++-.|+++-++++.....|.++.. ++.- .-..++.++++++|+|+..
T Consensus 1 ~~kI~ViGaGswGTALA~~la~ng-~~V~lw~r~~~~~~~i~~~~~N~~yLp-~i~lp~~l~at~Dl~~a~~~ad~iv~a 78 (329)
T COG0240 1 MMKIAVIGAGSWGTALAKVLARNG-HEVRLWGRDEEIVAEINETRENPKYLP-GILLPPNLKATTDLAEALDGADIIVIA 78 (329)
T ss_pred CceEEEEcCChHHHHHHHHHHhcC-CeeEEEecCHHHHHHHHhcCcCccccC-CccCCcccccccCHHHHHhcCCEEEEE
Confidence 589999999999999999999875 789999999999988876532322211 1110 0024688889999999999
Q ss_pred CCCcccHHHHHH
Q psy12817 641 LPYNLHHHVAEF 652 (1201)
Q Consensus 641 lP~~~h~~Vaka 652 (1201)
+|.....++++.
T Consensus 79 vPs~~~r~v~~~ 90 (329)
T COG0240 79 VPSQALREVLRQ 90 (329)
T ss_pred CChHHHHHHHHH
Confidence 998776666554
No 253
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.0091 Score=65.10 Aligned_cols=78 Identities=18% Similarity=0.277 Sum_probs=63.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++.+...+ .++..+.+|+++ .+.+.++++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 83 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA-GAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD--YQSIKAAVAHAETE 83 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHh
Confidence 3458999999 699999999999986 578999999999887776543 246788899998 777777765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 84 ~~~~d~li~~ag~ 96 (258)
T PRK06949 84 AGTIDILVNNSGV 96 (258)
T ss_pred cCCCCEEEECCCC
Confidence 47999999853
No 254
>PRK08309 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.015 Score=61.99 Aligned_cols=90 Identities=16% Similarity=0.307 Sum_probs=69.2
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
|+++|+| +|.++ .+++.|++. +++|.+.+|+.++++.+.... .++.++.+|+.| .+++.++++ ..
T Consensus 1 m~vlVtGGtG~gg-~la~~L~~~-G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d--~~sv~~~i~~~l~~~g~i 76 (177)
T PRK08309 1 MHALVIGGTGMLK-RVSLWLCEK-GFHVSVIARREVKLENVKRESTTPESITPLPLDYHD--DDALKLAIKSTIEKNGPF 76 (177)
T ss_pred CEEEEECcCHHHH-HHHHHHHHC-cCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 4799999 56554 599999886 578999999998887766533 246778889998 777776664 36
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCe
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKN 659 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh 659 (1201)
|++|+.+-......++++|-+.|++
T Consensus 77 d~lv~~vh~~~~~~~~~~~~~~gv~ 101 (177)
T PRK08309 77 DLAVAWIHSSAKDALSVVCRELDGS 101 (177)
T ss_pred eEEEEeccccchhhHHHHHHHHccC
Confidence 7888888777777788888888876
No 255
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.69 E-value=0.0082 Score=66.07 Aligned_cols=77 Identities=18% Similarity=0.217 Sum_probs=63.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+..+ ++..+.+|+.| .+.++++++ ..
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAE-GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcCCC
Confidence 457999999 699999999999986 5789999999999888877654 36788899998 777766654 47
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|++|++...
T Consensus 82 d~li~~ag~ 90 (263)
T PRK06200 82 DCFVGNAGI 90 (263)
T ss_pred CEEEECCCC
Confidence 999999853
No 256
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.68 E-value=0.0064 Score=70.53 Aligned_cols=77 Identities=8% Similarity=0.115 Sum_probs=55.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---------Cee----EEEeecCCCCchHHHhhc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---------RVE----ATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---------~v~----~v~lDV~D~~~e~L~elI 631 (1201)
.++|+|||+|.||+.++..++.. +++|++.|++++.+++..+... +.. .-.+.. ...+++.+
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~a-G~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~----~~~l~~av 81 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAH-GLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF----VATIEACV 81 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee----cCCHHHHh
Confidence 57999999999999999999875 7999999999886655332110 000 001111 23577888
Q ss_pred cCCcEEEEcCCCccc
Q psy12817 632 RSADLVVSLLPYNLH 646 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~h 646 (1201)
+++|+||.|+|-...
T Consensus 82 ~~aDlViEavpE~l~ 96 (321)
T PRK07066 82 ADADFIQESAPEREA 96 (321)
T ss_pred cCCCEEEECCcCCHH
Confidence 999999999997653
No 257
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=96.68 E-value=0.0047 Score=70.05 Aligned_cols=60 Identities=23% Similarity=0.283 Sum_probs=48.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~lP 642 (1201)
|||+|.| +|++|+.+++.|.+++ +|++.+|... .+..|+.| .+.+.++++ ++|+||+|..
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g--~V~~~~~~~~-------------~~~~Dl~d--~~~~~~~~~~~~~D~Vih~Aa 63 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG--NLIALDVHST-------------DYCGDFSN--PEGVAETVRKIRPDVIVNAAA 63 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC--CEEEeccccc-------------cccCCCCC--HHHHHHHHHhcCCCEEEECCc
Confidence 5899999 6999999999998875 5777777521 23468888 888888888 4899999974
No 258
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.68 E-value=0.0055 Score=65.65 Aligned_cols=76 Identities=17% Similarity=0.316 Sum_probs=60.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS------ 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~------ 633 (1201)
+++|+|.| +|.+|+.+++.|.++ +.+|++.+|+.++.+.+.... .++..+..|+.| .+.+.+++++
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAAD-GAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence 47999999 699999999999987 567999999988876655433 246677899998 7777766654
Q ss_pred -CcEEEEcCCC
Q psy12817 634 -ADLVVSLLPY 643 (1201)
Q Consensus 634 -~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 5999999753
No 259
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.67 E-value=0.0072 Score=65.08 Aligned_cols=78 Identities=19% Similarity=0.369 Sum_probs=61.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.++++|+|+| +|.+|..+++.|++. +++|++. +|+.++.+.+.... .++..+..|++| .+.+.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~-g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 79 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE-GAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS--EEDVENLVEQIVE 79 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 3568999999 699999999999876 5788888 99988776655443 246778899998 777777665
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 80 ~~~~id~vi~~ag~ 93 (247)
T PRK05565 80 KFGKIDILVNNAGI 93 (247)
T ss_pred HhCCCCEEEECCCc
Confidence 68999999754
No 260
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.67 E-value=0.0045 Score=69.62 Aligned_cols=92 Identities=18% Similarity=0.260 Sum_probs=72.2
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEEcC-
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVSLL- 641 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs~l- 641 (1201)
|+|+|+| +|. |+.+++.|.+. +++|++..++....+.+.. . +...+..+..| .+.+.+++++ .|+||+++
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~-g~~v~~s~~t~~~~~~~~~-~-g~~~v~~g~l~--~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ-GIEILVTVTTSEGKHLYPI-H-QALTVHTGALD--PQELREFLKRHSIDILVDATH 74 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC-CCeEEEEEccCCccccccc-c-CCceEEECCCC--HHHHHHHHHhcCCCEEEEcCC
Confidence 5899999 498 99999999876 4788887777766555443 2 23456667776 6778888874 89999999
Q ss_pred CCc--ccHHHHHHHHHcCCeEEEc
Q psy12817 642 PYN--LHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 642 P~~--~h~~VakacIeaGkh~VD~ 663 (1201)
|+. .+..++++|-+.|.+|+-.
T Consensus 75 PfA~~is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 75 PFAAQITTNATAVCKELGIPYVRF 98 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEE
Confidence 763 5688999999999999986
No 261
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.67 E-value=0.0075 Score=66.31 Aligned_cols=75 Identities=24% Similarity=0.315 Sum_probs=60.5
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.++. +++..+.+|++| .++++++++ ..
T Consensus 1 m~vlItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~~~~~~~~~~~~~g~i 77 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK-GARVVISSRNEENLEKALKELKEYGEVYAVKADLSD--KDDLKNLVKEAWELLGGI 77 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC--HHHHHHHHHHHHHhcCCC
Confidence 5899999 689999999999987 578999999998877665543 356778999998 777776663 57
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 78 d~li~naG~ 86 (259)
T PRK08340 78 DALVWNAGN 86 (259)
T ss_pred CEEEECCCC
Confidence 999999753
No 262
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.0088 Score=66.02 Aligned_cols=78 Identities=13% Similarity=0.236 Sum_probs=62.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++++|.| +|.+|+.+++.|+++ +++|++++|+.++++++.+.. .++..+.+|++| .+.+.++++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 84 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEA-GADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEA 84 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 3468999999 689999999999987 579999999998877766543 246778899998 777766554
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 85 ~~~id~vi~~Ag~ 97 (263)
T PRK07814 85 FGRLDIVVNNVGG 97 (263)
T ss_pred cCCCCEEEECCCC
Confidence 57999999753
No 263
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.0055 Score=65.95 Aligned_cols=75 Identities=17% Similarity=0.219 Sum_probs=60.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----CCcEEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-----SADLVV 638 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-----~~DVVI 638 (1201)
|++|+|.| +|.+|+.+++.|++. +.+|++++|+.++.+.+.. ..++....+|+.| .+.++++++ +.|+||
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~d--~~~~~~~~~~~~~~~id~vi 76 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER-GWQVTATVRGPQQDTALQA-LPGVHIEKLDMND--PASLDQLLQRLQGQRFDLLF 76 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC-CCEEEEEeCCCcchHHHHh-ccccceEEcCCCC--HHHHHHHHHHhhcCCCCEEE
Confidence 57899999 799999999999987 5799999999887665543 3467778899998 777766655 479999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 77 ~~ag~ 81 (225)
T PRK08177 77 VNAGI 81 (225)
T ss_pred EcCcc
Confidence 98753
No 264
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.0098 Score=64.52 Aligned_cols=77 Identities=19% Similarity=0.384 Sum_probs=60.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++++|.| +|++|+.+++.|++. +.+|++.+|+.+..+.+.+.. +++..+.+|++| .+++.++++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALARE-GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 457899999 699999999999987 578999999987766655432 245678899998 777766554
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 82 ~~id~vi~~ag~ 93 (250)
T PRK07774 82 GGIDYLVNNAAI 93 (250)
T ss_pred CCCCEEEECCCC
Confidence 57999999864
No 265
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.64 E-value=0.0062 Score=69.01 Aligned_cols=75 Identities=24% Similarity=0.384 Sum_probs=53.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc--------CCeeE----------EEeecCCCCchH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF--------GRVEA----------TLIDVNNGGSDN 626 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~--------~~v~~----------v~lDV~D~~~e~ 626 (1201)
++||.|||+|.||..++..|++. +++|++.|++.+.+++..+.. ++... -.+.++ .+
T Consensus 3 ~~kIaViGaG~mG~~iA~~la~~-G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~d 77 (287)
T PRK08293 3 IKNVTVAGAGVLGSQIAFQTAFH-GFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLT----TD 77 (287)
T ss_pred ccEEEEECCCHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEe----CC
Confidence 47999999999999999999876 578999999988766554321 00000 001112 24
Q ss_pred HHhhccCCcEEEEcCCCc
Q psy12817 627 LSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 627 L~elI~~~DVVIs~lP~~ 644 (1201)
+++.++++|+||.|+|..
T Consensus 78 ~~~a~~~aDlVieavpe~ 95 (287)
T PRK08293 78 LAEAVKDADLVIEAVPED 95 (287)
T ss_pred HHHHhcCCCEEEEeccCC
Confidence 667788999999999965
No 266
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.63 E-value=0.0043 Score=71.05 Aligned_cols=62 Identities=21% Similarity=0.267 Sum_probs=48.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.+||+|||+|.+|++++..|.+. +++|++.+|+.. + .+.++++++|+||.|+|.
T Consensus 3 ~~m~I~iiG~G~~G~~lA~~l~~~-G~~V~~~~r~~~--------------------~----~~~~~~~~advvi~~vp~ 57 (308)
T PRK14619 3 QPKTIAILGAGAWGSTLAGLASAN-GHRVRVWSRRSG--------------------L----SLAAVLADADVIVSAVSM 57 (308)
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-CCEEEEEeCCCC--------------------C----CHHHHHhcCCEEEEECCh
Confidence 457899999999999999999886 478999999742 1 245566789999999997
Q ss_pred cccHHHH
Q psy12817 644 NLHHHVA 650 (1201)
Q Consensus 644 ~~h~~Va 650 (1201)
.....++
T Consensus 58 ~~~~~v~ 64 (308)
T PRK14619 58 KGVRPVA 64 (308)
T ss_pred HHHHHHH
Confidence 5444444
No 267
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=96.63 E-value=0.0092 Score=71.71 Aligned_cols=116 Identities=16% Similarity=0.212 Sum_probs=71.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe-e--------EEEeecCCCCchHHHhhccCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV-E--------ATLIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v-~--------~v~lDV~D~~~e~L~elI~~~ 634 (1201)
.++||.|||.|+||.+++..|++ + ++|+++|+++++.+.+.+...-+ + ...+-+++ .. +.++++
T Consensus 5 ~~mkI~vIGlGyvGlpmA~~la~-~-~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~----~~-~~~~~a 77 (425)
T PRK15182 5 DEVKIAIIGLGYVGLPLAVEFGK-S-RQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLKFTS----EI-EKIKEC 77 (425)
T ss_pred CCCeEEEECcCcchHHHHHHHhc-C-CEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCeeEEe----CH-HHHcCC
Confidence 45899999999999999999877 3 89999999999999988432100 0 00011111 12 246799
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
|+||.|+|...+.. | -.|.+|+-.....+.+.. +.|.+++.+.-+.||.+.-
T Consensus 78 dvvii~Vptp~~~~--------~--~~dl~~v~~a~~~i~~~l-~~g~lVI~~STv~pgtt~~ 129 (425)
T PRK15182 78 NFYIITVPTPINTY--------K--QPDLTPLIKASETVGTVL-NRGDIVVYESTVYPGCTEE 129 (425)
T ss_pred CEEEEEcCCCCCCC--------C--CcchHHHHHHHHHHHHhc-CCCCEEEEecCCCCcchHH
Confidence 99999998764310 0 023333333333332222 3466666677777776553
No 268
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.63 E-value=0.0051 Score=62.57 Aligned_cols=76 Identities=18% Similarity=0.325 Sum_probs=61.3
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC--HHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL--KEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~--~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
|.++|+| +|.+|+.+++.|++++...|.+++|+ .+.++++...+ .++.++.+|+++ .++++++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD--PESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS--HHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc--ccccccccccccccc
Confidence 5789999 79999999999999977789999999 66676665443 357889999998 777776653
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~~ld~li~~ag~ 90 (167)
T PF00106_consen 79 GPLDILINNAGI 90 (167)
T ss_dssp SSESEEEEECSC
T ss_pred cccccccccccc
Confidence 57999999753
No 269
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=96.63 E-value=0.0077 Score=74.84 Aligned_cols=102 Identities=24% Similarity=0.232 Sum_probs=69.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC--------------H--------HHH----HHHHHHcCCeeE-
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL--------------K--------EDI----DKVTNEFGRVEA- 614 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~--------------~--------ekA----e~La~~~~~v~~- 614 (1201)
..+..||+|+|||..|..++++|++.+--+++++|.+ . .|+ +++.+..|+++.
T Consensus 335 kL~~~kVLIvGaGGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~ 414 (664)
T TIGR01381 335 RYSQLKVLLLGAGTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT 414 (664)
T ss_pred HHhcCeEEEECCcHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence 4567899999999999999999999876678888742 1 122 233333465543
Q ss_pred -EEeec------CCC--------CchHHHhhccCCcEEEEcCCCcc-cHHHHHHHHHcCCeEEEc
Q psy12817 615 -TLIDV------NNG--------GSDNLSGLVRSADLVVSLLPYNL-HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 615 -v~lDV------~D~--------~~e~L~elI~~~DVVIs~lP~~~-h~~VakacIeaGkh~VD~ 663 (1201)
+...+ -+. +.+.+.++++++|+|+.|+-..- ...+..+|.++++.+|..
T Consensus 415 ~~~~~Ipm~Gh~i~~~~~~~~~~d~~~l~~Li~~~DvV~d~tDn~esR~L~n~~c~~~~kplI~a 479 (664)
T TIGR01381 415 GHRLTVPMPGHPIDEKDVPELEKDIARLEQLIKDHDVVFLLLDSREARWLPTVLCSRHKKIAISA 479 (664)
T ss_pred EeeeeeccccccCCchhhhhccccHHHHHHHHhhCCEEEECCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 33332 110 12468889999999999996532 245667888888887764
No 270
>PRK08643 acetoin reductase; Validated
Probab=96.63 E-value=0.0082 Score=65.57 Aligned_cols=76 Identities=20% Similarity=0.286 Sum_probs=60.6
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+|+++|.| +|.+|+.+++.|++. +.+|.+.+|+.++++++.... .++..+.+|++| ++.+.++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED-GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 47889999 799999999999987 578999999988777666543 245678899998 777766654
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 47999999853
No 271
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.011 Score=63.93 Aligned_cols=77 Identities=16% Similarity=0.239 Sum_probs=61.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++|+|.| +|.+|+.+++.|.+. +.+|++.+|+.++++.+.+.. .++..+.+|+.| .+.+.++++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEA-GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAAL 82 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 458999999 699999999999986 578888899988777665443 347788899998 777776653
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 58999999853
No 272
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.62 E-value=0.0094 Score=64.55 Aligned_cols=77 Identities=17% Similarity=0.341 Sum_probs=62.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
++++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++.+++.... .++..+..|+.| .+.++++++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEE-GAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD--RDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 468999999 699999999999986 578999999998877665432 357788999998 777777664
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~~~d~vi~~ag~ 90 (250)
T TIGR03206 79 GPVDVLVNNAGW 90 (250)
T ss_pred CCCCEEEECCCC
Confidence 57999999854
No 273
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.62 E-value=0.0061 Score=71.28 Aligned_cols=94 Identities=20% Similarity=0.272 Sum_probs=67.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH-HcCC---------eeEEEeecCCCCchHHHhhccC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTN-EFGR---------VEATLIDVNNGGSDNLSGLVRS 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~-~~~~---------v~~v~lDV~D~~~e~L~elI~~ 633 (1201)
|+||+|+| +|++|+.+++.|.+++..+++.+.++.+.+.+... .++. .....+...+ .+. +.+
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~----~~~ 76 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTD--PEA----VDD 76 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCC--HHH----hcC
Confidence 58999999 79999999999999988898877666544432211 1111 0111222222 222 358
Q ss_pred CcEEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 634 ADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 634 ~DVVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|+|+.|+|...+.++++.+.++|+.+||.|
T Consensus 77 ~DvVf~a~p~~~s~~~~~~~~~~G~~vIDls 107 (349)
T PRK08664 77 VDIVFSALPSDVAGEVEEEFAKAGKPVFSNA 107 (349)
T ss_pred CCEEEEeCChhHHHHHHHHHHHCCCEEEECC
Confidence 9999999999888888898899999999986
No 274
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.62 E-value=0.0078 Score=65.64 Aligned_cols=77 Identities=19% Similarity=0.353 Sum_probs=60.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS----- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~----- 633 (1201)
++++++|.| +|.+|+.+++.|++. +.+|++.+|++++.+++.+.+ .++..++.|++| .+.+.+++++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARA-GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN--EDAVNAGIDKVAERF 82 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 468999999 699999999999986 568999999997776665543 235668899998 7777766553
Q ss_pred --CcEEEEcCCC
Q psy12817 634 --ADLVVSLLPY 643 (1201)
Q Consensus 634 --~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 83 ~~~d~vi~~ag~ 94 (262)
T PRK13394 83 GSVDILVSNAGI 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 7999999853
No 275
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=96.62 E-value=0.0058 Score=70.40 Aligned_cols=77 Identities=19% Similarity=0.281 Sum_probs=60.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.||.|+| +|++|.-+++.|.+++++++. +.++.. + +..+ ..++++++|+|+.|+|.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~---------~--------~~~~-----~~~~~~~~D~vFlalp~ 59 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR---------K--------DAAE-----RAKLLNAADVAILCLPD 59 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc---------c--------CcCC-----HhHhhcCCCEEEECCCH
Confidence 4899999 799999999999999999855 433321 1 1111 23455689999999998
Q ss_pred cccHHHHHHHHHcCCeEEEcc
Q psy12817 644 NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~S 664 (1201)
....+++..+.++|+.+||.|
T Consensus 60 ~~s~~~~~~~~~~g~~VIDlS 80 (310)
T TIGR01851 60 DAAREAVSLVDNPNTCIIDAS 80 (310)
T ss_pred HHHHHHHHHHHhCCCEEEECC
Confidence 888888888889999999997
No 276
>PRK07877 hypothetical protein; Provisional
Probab=96.62 E-value=0.006 Score=77.35 Aligned_cols=101 Identities=11% Similarity=0.057 Sum_probs=72.4
Q ss_pred ccccCCCeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCH------------------HHHHHHHHH----cCCee--E
Q psy12817 560 IQTEESRNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLK------------------EDIDKVTNE----FGRVE--A 614 (1201)
Q Consensus 560 ~~~~~mkKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~------------------ekAe~La~~----~~~v~--~ 614 (1201)
++..+..+|+|+|+| +|..++.+|++.+. -+++++|.+. .|++.+++. .|.++ +
T Consensus 102 Q~~L~~~~V~IvG~G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~ 180 (722)
T PRK07877 102 QERLGRLRIGVVGLS-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEV 180 (722)
T ss_pred HHHHhcCCEEEEEec-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEE
Confidence 334667899999999 99999999999864 4788887531 133333332 24444 3
Q ss_pred EEeecCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEcc
Q psy12817 615 TLIDVNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 615 v~lDV~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~S 664 (1201)
+...++ .+.+.++++++|+||+|+-.. ....+.++|.+.|+.+|..+
T Consensus 181 ~~~~i~---~~n~~~~l~~~DlVvD~~D~~~~R~~ln~~a~~~~iP~i~~~ 228 (722)
T PRK07877 181 FTDGLT---EDNVDAFLDGLDVVVEECDSLDVKVLLREAARARRIPVLMAT 228 (722)
T ss_pred EeccCC---HHHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 333343 578999999999999999643 34567789999999988764
No 277
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.61 E-value=0.0086 Score=64.73 Aligned_cols=77 Identities=18% Similarity=0.338 Sum_probs=61.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.... .++..+.+|+++ .+.+.++++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKE-GVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD--YEEVTAAIEQLKNEL 82 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 357899999 799999999999986 468999999988776654432 246778899998 778877765
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++.+.
T Consensus 83 ~~id~vi~~ag~ 94 (239)
T PRK07666 83 GSIDILINNAGI 94 (239)
T ss_pred CCccEEEEcCcc
Confidence 68999999853
No 278
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.0092 Score=65.44 Aligned_cols=78 Identities=18% Similarity=0.240 Sum_probs=62.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++++.+ .++..+.+|++| .+.+.++++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~ 81 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFARE-GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAE 81 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHH
Confidence 3468899999 699999999999987 578999999998887776543 136678899998 777777665
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 82 ~~~g~id~li~~ag~ 96 (260)
T PRK07063 82 EAFGPLDVLVNNAGI 96 (260)
T ss_pred HHhCCCcEEEECCCc
Confidence 58999999753
No 279
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.60 E-value=0.0054 Score=64.94 Aligned_cols=70 Identities=21% Similarity=0.262 Sum_probs=52.0
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+...++|+|+|+|.||+.+++.|... +.+|.++||+......... . ++. ...++++++++|+|++++
T Consensus 33 ~l~g~tvgIiG~G~IG~~vA~~l~~f-G~~V~~~d~~~~~~~~~~~-~-~~~----------~~~l~ell~~aDiv~~~~ 99 (178)
T PF02826_consen 33 ELRGKTVGIIGYGRIGRAVARRLKAF-GMRVIGYDRSPKPEEGADE-F-GVE----------YVSLDELLAQADIVSLHL 99 (178)
T ss_dssp -STTSEEEEESTSHHHHHHHHHHHHT-T-EEEEEESSCHHHHHHHH-T-TEE----------ESSHHHHHHH-SEEEE-S
T ss_pred ccCCCEEEEEEEcCCcCeEeeeeecC-CceeEEecccCChhhhccc-c-cce----------eeehhhhcchhhhhhhhh
Confidence 45679999999999999999999976 5799999999886552222 1 222 236888899999999999
Q ss_pred CCc
Q psy12817 642 PYN 644 (1201)
Q Consensus 642 P~~ 644 (1201)
|..
T Consensus 100 plt 102 (178)
T PF02826_consen 100 PLT 102 (178)
T ss_dssp SSS
T ss_pred ccc
Confidence 953
No 280
>PLN02712 arogenate dehydrogenase
Probab=96.59 E-value=0.018 Score=72.92 Aligned_cols=95 Identities=12% Similarity=0.089 Sum_probs=63.9
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-cCCcEEEEc
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-RSADLVVSL 640 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-~~~DVVIs~ 640 (1201)
+.++++|+|||+|.||+.++..|.+. +++|++++|+... ..+..+ ++.. ..+ ..+++ +++|+||.|
T Consensus 49 ~~~~~kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~~~--~~A~~~-Gv~~----~~d-----~~e~~~~~aDvViLa 115 (667)
T PLN02712 49 NTTQLKIAIIGFGNYGQFLAKTLISQ-GHTVLAHSRSDHS--LAARSL-GVSF----FLD-----PHDLCERHPDVILLC 115 (667)
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHH--HHHHHc-CCEE----eCC-----HHHHhhcCCCEEEEc
Confidence 45578999999999999999999876 4789999998543 234444 3332 222 33433 469999999
Q ss_pred CCCcccHHHHHHH----HHcCCeEEEccCChHH
Q psy12817 641 LPYNLHHHVAEFC----IQHGKNLVTASYLSPE 669 (1201)
Q Consensus 641 lP~~~h~~Vakac----IeaGkh~VD~Syvs~e 669 (1201)
+|...-..+++.. ++.++-++|.+-+...
T Consensus 116 vP~~~~~~vl~~l~~~~l~~g~iVvDv~SvK~~ 148 (667)
T PLN02712 116 TSIISTENVLKSLPLQRLKRNTLFVDVLSVKEF 148 (667)
T ss_pred CCHHHHHHHHHhhhhhcCCCCeEEEECCCCcHH
Confidence 9976545554432 2345667777654443
No 281
>PRK06199 ornithine cyclodeaminase; Validated
Probab=96.58 E-value=0.0047 Score=73.13 Aligned_cols=93 Identities=19% Similarity=0.269 Sum_probs=68.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-CCCC-eEEEEeCCHHHHHHHHHHcC----CeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-DENI-HITLGSLLKEDIDKVTNEFG----RVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-~~~~-~VtVadR~~ekAe~La~~~~----~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.++++|||+|..++..++.+.. ++++ +|.|.+|++++++++++++. ++.. +.+. ++.+++++++|+|+
T Consensus 155 a~~l~iiG~G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~--v~~~----~s~~eav~~ADIVv 228 (379)
T PRK06199 155 SKVVGLLGPGVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITN--VEVV----DSIEEVVRGSDIVT 228 (379)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCce--EEEe----CCHHHHHcCCCEEE
Confidence 5799999999999999999876 4434 69999999999999887653 2211 1122 25788889999999
Q ss_pred EcCCCcc-----cHHHHHHHHHcCCeEEEc
Q psy12817 639 SLLPYNL-----HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 639 s~lP~~~-----h~~VakacIeaGkh~VD~ 663 (1201)
.|++..- .+-+-...++.|.|+...
T Consensus 229 taT~s~~~~~s~~Pv~~~~~lkpG~hv~~i 258 (379)
T PRK06199 229 YCNSGETGDPSTYPYVKREWVKPGAFLLMP 258 (379)
T ss_pred EccCCCCCCCCcCcEecHHHcCCCcEEecC
Confidence 9996422 133334567899998765
No 282
>PRK05865 hypothetical protein; Provisional
Probab=96.58 E-value=0.019 Score=74.29 Aligned_cols=107 Identities=15% Similarity=0.147 Sum_probs=77.3
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||+|.| +|++|+.+++.|.+. +++|++.+|+.... +. .++..+..|+.| .+.+.++++++|+||+|....
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~-G~~Vv~l~R~~~~~--~~---~~v~~v~gDL~D--~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ-GHEVVGIARHRPDS--WP---SSADFIAADIRD--ATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCchhh--cc---cCceEEEeeCCC--HHHHHHHHhCCCEEEECCCcc
Confidence 5899999 699999999999886 57899999875321 11 257788999998 888999999999999998532
Q ss_pred c---------cHHHHHHHHHcCC-eEEEccCChHHHHHHHHHHHHcCC
Q psy12817 645 L---------HHHVAEFCIQHGK-NLVTASYLSPEMMALHERAASAGI 682 (1201)
Q Consensus 645 ~---------h~~VakacIeaGk-h~VD~Syvs~e~~eLde~AkeAGV 682 (1201)
. ...++++|.++|+ ++|-+|-... .+.++.+++.|+
T Consensus 73 ~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~K--~aaE~ll~~~gl 118 (854)
T PRK05865 73 GRNDHINIDGTANVLKAMAETGTGRIVFTSSGHQ--PRVEQMLADCGL 118 (854)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCeEEEECCcHH--HHHHHHHHHcCC
Confidence 1 2346788888875 6666654431 122334455665
No 283
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.58 E-value=0.01 Score=64.95 Aligned_cols=76 Identities=17% Similarity=0.278 Sum_probs=62.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.++|+|.| +|.+|+.+++.|+++ +++|++++|+.++.+++.+... ++..+.+|++| .+.+.++++ ..
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAE-GARVVIADIKPARARLAALEIGPAAIAVSLDVTR--QDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 357899999 699999999999987 5789999999998887776542 46778899998 777776665 47
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|+||++..
T Consensus 82 d~li~~ag 89 (257)
T PRK07067 82 DILFNNAA 89 (257)
T ss_pred CEEEECCC
Confidence 99999875
No 284
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.0096 Score=65.91 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=60.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
+.++|+|.| +|.+|+.+++.|++. +++|++.+|+.++++.+.+.. .++..+..|+.| .+.+.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAA-GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD--EDQVARAVDAATA 82 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 358999999 699999999999986 578999999988776655442 245677889998 777777665
Q ss_pred ---CCcEEEEcCC
Q psy12817 633 ---SADLVVSLLP 642 (1201)
Q Consensus 633 ---~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 83 ~~~~~d~li~~ag 95 (276)
T PRK05875 83 WHGRLHGVVHCAG 95 (276)
T ss_pred HcCCCCEEEECCC
Confidence 5799999985
No 285
>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional
Probab=96.57 E-value=0.016 Score=74.74 Aligned_cols=161 Identities=14% Similarity=0.192 Sum_probs=96.6
Q ss_pred cccccccccccCCCeEEEEcCchhHHHHHHHHHhC-------CC--Ce-EEEEeCCHH-------HHHHHHHHcCCeeEE
Q psy12817 553 KSRHKADIQTEESRNVLLLGAGYVSRPLIEYLHRD-------EN--IH-ITLGSLLKE-------DIDKVTNEFGRVEAT 615 (1201)
Q Consensus 553 ~~~s~~~~~~~~mkKVLILGAG~VG~~va~~La~~-------~~--~~-VtVadR~~e-------kAe~La~~~~~v~~v 615 (1201)
++.|..=....+..+|+|+|+|.||+.+++.|.++ .+ ++ +.|++++.. ....+...+...
T Consensus 446 ~~LH~~f~~~~~~i~i~l~G~G~VG~~l~~~l~~~~~~l~~~~g~~~~v~~I~~s~~~~~~~~gi~~~~~~~~~~~~--- 522 (810)
T PRK09466 446 QGLHQSLFRAEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLVGVVDSRRSLLNYDGLDASRALAFFDDE--- 522 (810)
T ss_pred HHHHHHHhCcCceEEEEEEecCCChHHHHHHHHHHHHHHHHhcCCCEEEEEEEeCCccccCccCCCHHHHHhhHHhh---
Confidence 33343334455678999999999999999998653 13 33 345665532 112222222110
Q ss_pred EeecCCCCchHHHhhccC----CcEEEEcCCCcccHHHHHHHHHcCCeEEEccC-----ChHHHHHHHHHHHHcCCEEEe
Q psy12817 616 LIDVNNGGSDNLSGLVRS----ADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY-----LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 616 ~lDV~D~~~e~L~elI~~----~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy-----vs~e~~eLde~AkeAGVtil~ 686 (1201)
..+ .+ .+.+.+.+.+ .++||+|+|..-.......|+++|+|+|++.= ......+|.+.|+++|+.+.-
T Consensus 523 ~~~-~~--~~~~~e~i~~~~~~~~vvVd~t~~~~~~~~~~~aL~~G~~VVtaNK~~~a~~~~~~~~l~~~a~~~~~~~~y 599 (810)
T PRK09466 523 AVE-WD--EESLFLWLRAHPYDELVVLDVTASEQLALQYPDFASHGFHVISANKLAGSSPSNFYRQIKDAFAKTGRHWLY 599 (810)
T ss_pred cCC-cc--HHHHHHHHhhcCCCCcEEEECCCChHHHHHHHHHHHcCCEEEcCCcccccccHHHHHHHHHHHHHcCCeEEE
Confidence 011 11 3344455542 35999999865334455699999999999852 235677898999999999987
Q ss_pred ccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecCC
Q psy12817 687 EVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGG 722 (1201)
Q Consensus 687 e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cGG 722 (1201)
|.-+.-|+==+ ..++.+.+.|.+|.++.....|
T Consensus 600 EasV~~giPii---~~l~~l~~~gd~i~~i~GIlnG 632 (810)
T PRK09466 600 NATVGAGLPIN---HTVRDLRNSGDSILAISGIFSG 632 (810)
T ss_pred eceeeeccChH---HHHHHHHhccCcEEEEEEEEcc
Confidence 75433332111 2233444456788777654433
No 286
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.56 E-value=0.018 Score=71.99 Aligned_cols=112 Identities=17% Similarity=0.211 Sum_probs=81.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~ 643 (1201)
..+|+|+|+|++|+.+++.|.+. +.++++.|.|+++++++.+ . +...+..|.+| ++.++++ ++++|+||.+++.
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~-~-g~~v~~GDat~--~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMAN-KMRITVLERDISAVNLMRK-Y-GYKVYYGDATQ--LELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHh-C-CCeEEEeeCCC--HHHHHhcCCccCCEEEEEeCC
Confidence 47899999999999999999875 5789999999999998754 3 67889999998 7778765 7789999999986
Q ss_pred cc-cHHHHHHHHHcCC--eEEEccCChHHHHHHHHHHHHcCCEEE
Q psy12817 644 NL-HHHVAEFCIQHGK--NLVTASYLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 644 ~~-h~~VakacIeaGk--h~VD~Syvs~e~~eLde~AkeAGVtil 685 (1201)
.. +..++..+-+... +++.-.......+.| +++|+..+
T Consensus 475 ~~~n~~i~~~~r~~~p~~~IiaRa~~~~~~~~L----~~~Ga~~v 515 (601)
T PRK03659 475 PEDTMKIVELCQQHFPHLHILARARGRVEAHEL----LQAGVTQF 515 (601)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHH----HhCCCCEE
Confidence 53 3345555544433 344434444444443 55676544
No 287
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.0097 Score=65.05 Aligned_cols=75 Identities=16% Similarity=0.261 Sum_probs=61.4
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+++++|.| +|.+|+.+++.|++. +.+|++.+|+.++++.+..... ++..+.+|+.| .+.+.+++. ..
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA-GDRVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 46899999 599999999999986 5789999999998887776542 46778999998 777776665 37
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|+||++..
T Consensus 79 d~vi~~ag 86 (257)
T PRK07074 79 DVLVANAG 86 (257)
T ss_pred CEEEECCC
Confidence 99999975
No 288
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.55 E-value=0.0061 Score=64.52 Aligned_cols=75 Identities=17% Similarity=0.261 Sum_probs=53.1
Q ss_pred ccCCCeEEEEcCchh-HHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 562 TEESRNVLLLGAGYV-SRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 562 ~~~mkKVLILGAG~V-G~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
+...++|+|+|+|.+ |..++++|.+++ .+|++++|+. +++.+.++++|+||++
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g-~~V~v~~r~~-------------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRN-ATVTVCHSKT-------------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCC-CEEEEEECCc-------------------------hhHHHHHhhCCEEEEc
Confidence 466799999999985 899999999864 5799999863 1355677899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
++... -+-+.-++.+.-++|++
T Consensus 95 t~~~~--ii~~~~~~~~~viIDla 116 (168)
T cd01080 95 VGKPG--LVKGDMVKPGAVVIDVG 116 (168)
T ss_pred CCCCc--eecHHHccCCeEEEEcc
Confidence 97531 12222334445555554
No 289
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.01 Score=67.18 Aligned_cols=79 Identities=11% Similarity=0.123 Sum_probs=61.1
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc--
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
+.+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.+++++..+.. .++..+.+|+.| .+.++++++
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~-G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~ 89 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAK-GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS--LASVRAAADAL 89 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHH
Confidence 44568999999 699999999999987 578999999988765543322 246778899998 777766654
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 90 ~~~~~~iD~li~nAg~ 105 (306)
T PRK06197 90 RAAYPRIDLLINNAGV 105 (306)
T ss_pred HhhCCCCCEEEECCcc
Confidence 47999999753
No 290
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.012 Score=65.46 Aligned_cols=76 Identities=14% Similarity=0.167 Sum_probs=61.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|.++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.+ .++.++.+|++| .++++++++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARA-GADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence 457899999 689999999999987 578999999998887766543 247788999998 777777765
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 84 g~iD~lv~nag 94 (263)
T PRK08339 84 GEPDIFFFSTG 94 (263)
T ss_pred CCCcEEEECCC
Confidence 4799999874
No 291
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.53 E-value=0.0061 Score=70.34 Aligned_cols=76 Identities=17% Similarity=0.236 Sum_probs=59.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhccC--CcEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVRS--ADLV 637 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~~--~DVV 637 (1201)
++|+|+|.| +|++|+.+++.|++. +.+|++.+|+........... .++..+..|+.| .+.+.+++++ .|+|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~d~v 79 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLEL-GAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD--AAKLRKAIAEFKPEIV 79 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHC-CCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC--HHHHHHHHhhcCCCEE
Confidence 458999999 699999999999986 578988898776543322111 246678899998 8889888885 5999
Q ss_pred EEcCC
Q psy12817 638 VSLLP 642 (1201)
Q Consensus 638 Is~lP 642 (1201)
|++..
T Consensus 80 ih~A~ 84 (349)
T TIGR02622 80 FHLAA 84 (349)
T ss_pred EECCc
Confidence 99985
No 292
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.53 E-value=0.015 Score=63.21 Aligned_cols=89 Identities=18% Similarity=0.154 Sum_probs=61.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+.++|+|+|+|.+|...++.|.+.+ .+|+|++++.. .+++++.. ..+....-.. ..+.+.++|+||.|+
T Consensus 8 l~~k~vLVIGgG~va~~ka~~Ll~~g-a~V~VIs~~~~~~l~~l~~~-~~i~~~~~~~-------~~~~l~~adlViaaT 78 (202)
T PRK06718 8 LSNKRVVIVGGGKVAGRRAITLLKYG-AHIVVISPELTENLVKLVEE-GKIRWKQKEF-------EPSDIVDAFLVIAAT 78 (202)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEcCCCCHHHHHHHhC-CCEEEEecCC-------ChhhcCCceEEEEcC
Confidence 45789999999999999999999864 78999988753 34555443 2344322111 123467899999999
Q ss_pred CCc-ccHHHHHHHHHcCCeEE
Q psy12817 642 PYN-LHHHVAEFCIQHGKNLV 661 (1201)
Q Consensus 642 P~~-~h~~VakacIeaGkh~V 661 (1201)
... .+..+.+.| +.++.+-
T Consensus 79 ~d~elN~~i~~~a-~~~~lvn 98 (202)
T PRK06718 79 NDPRVNEQVKEDL-PENALFN 98 (202)
T ss_pred CCHHHHHHHHHHH-HhCCcEE
Confidence 653 567777777 5565443
No 293
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.012 Score=64.24 Aligned_cols=77 Identities=17% Similarity=0.306 Sum_probs=61.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|.+.+|+.++++++.+.+ .++..+.+|+.| .++++++++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFARE-GAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF 81 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 357899999 699999999999986 578999999998887776543 246678899998 777776665
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 57999999853
No 294
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=96.52 E-value=0.011 Score=67.63 Aligned_cols=74 Identities=20% Similarity=0.302 Sum_probs=55.3
Q ss_pred EEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeE----EEeecCCCCchHHHhhcc--CC
Q psy12817 568 VLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEA----TLIDVNNGGSDNLSGLVR--SA 634 (1201)
Q Consensus 568 VLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~----v~lDV~D~~~e~L~elI~--~~ 634 (1201)
|+|-| +|.+|+.++++|++.+..+|.+.|+++.+.-.+..++ + ++.. +..|+.| .+.+..+++ +.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd--~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRD--KERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCH--HHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccC--HHHHHHHHhhcCC
Confidence 78999 7999999999999986678999999999887777665 2 3432 3568887 888999999 89
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+|+++.-+
T Consensus 79 diVfHaAA~ 87 (293)
T PF02719_consen 79 DIVFHAAAL 87 (293)
T ss_dssp SEEEE----
T ss_pred CEEEEChhc
Confidence 999999854
No 295
>PTZ00325 malate dehydrogenase; Provisional
Probab=96.52 E-value=0.028 Score=65.26 Aligned_cols=151 Identities=15% Similarity=0.100 Sum_probs=83.0
Q ss_pred cCCCeEEEEcC-chhHHHHHHHHHhCCC-CeEEEEeCCHHHHH--HHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 563 EESRNVLLLGA-GYVSRPLIEYLHRDEN-IHITLGSLLKEDID--KVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILGA-G~VG~~va~~La~~~~-~~VtVadR~~ekAe--~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.+|+||+|+|+ |.||+.++..|+..+. .++.+.|++..+++ .+....+ .....+.+| ..+..+.++++|+||
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~--~~~v~~~td--~~~~~~~l~gaDvVV 81 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDT--PAKVTGYAD--GELWEKALRGADLVL 81 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCc--CceEEEecC--CCchHHHhCCCCEEE
Confidence 57899999997 9999999999885533 46999999433332 2221111 223344544 344567889999999
Q ss_pred EcCCCcc------------c----HHHHHHHHHcCCe--EEEccCChHHHHHHHH--HHHHcCCEE--EeccccCchhHH
Q psy12817 639 SLLPYNL------------H----HHVAEFCIQHGKN--LVTASYLSPEMMALHE--RAASAGITV--LNEVGLDPGIDH 696 (1201)
Q Consensus 639 s~lP~~~------------h----~~VakacIeaGkh--~VD~Syvs~e~~eLde--~AkeAGVti--l~e~GlDPGIdh 696 (1201)
+++.... + ..++++..+++.+ ++-.|--.+-+..+.+ ..+..|..= +.++| .+|+
T Consensus 82 itaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g---~LDs 158 (321)
T PTZ00325 82 ICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVT---TLDV 158 (321)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeech---hHHH
Confidence 9984311 1 1244555567765 2223332223333321 123334321 22333 4888
Q ss_pred HHHHHHHHHhhhcCCcEEEEEeecCC
Q psy12817 697 LLAMECIDAAHLNGGKVESFVSYCGG 722 (1201)
Q Consensus 697 mlA~~~idei~~~ggkV~sf~s~cGG 722 (1201)
.-.+..+.+- .+-...++..|+-|
T Consensus 159 ~R~r~~la~~--l~v~~~~V~~~VlG 182 (321)
T PTZ00325 159 VRARKFVAEA--LGMNPYDVNVPVVG 182 (321)
T ss_pred HHHHHHHHHH--hCcChhheEEEEEe
Confidence 7777655443 12234455556544
No 296
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.013 Score=63.37 Aligned_cols=77 Identities=10% Similarity=0.128 Sum_probs=60.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhc-------cCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLV-------RSA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI-------~~~ 634 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.++++ ++..+++|+.| .+++.+++ ...
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAE-GARVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 357999999 699999999999987 4789999999888777766553 46678899987 66555443 357
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 82 d~vi~~ag~ 90 (249)
T PRK06500 82 DAVFINAGV 90 (249)
T ss_pred CEEEECCCC
Confidence 999999864
No 297
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.013 Score=62.60 Aligned_cols=77 Identities=14% Similarity=0.154 Sum_probs=59.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc--CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF--GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~--~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++..+..... .++..+..|+.| .+++.++++ +
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAAR-GARVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHC-CCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 457999999 699999999999887 678999999887655443322 246777899988 777776665 5
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++.+.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 7999998753
No 298
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.013 Score=67.91 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=62.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhc------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLV------ 631 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI------ 631 (1201)
...+.|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.++. ..+..+.+|++| .+++++++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~-G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 81 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARR-GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASF 81 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHh
Confidence 3457999999 599999999999987 578999999999888776543 245677899998 77777765
Q ss_pred -cCCcEEEEcCCC
Q psy12817 632 -RSADLVVSLLPY 643 (1201)
Q Consensus 632 -~~~DVVIs~lP~ 643 (1201)
...|++|++...
T Consensus 82 ~g~iD~lVnnAG~ 94 (330)
T PRK06139 82 GGRIDVWVNNVGV 94 (330)
T ss_pred cCCCCEEEECCCc
Confidence 357999999853
No 299
>PRK08605 D-lactate dehydrogenase; Validated
Probab=96.49 E-value=0.0099 Score=69.16 Aligned_cols=88 Identities=15% Similarity=0.210 Sum_probs=58.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||+|.+|+.+++.|++.-+.+|...|++..+.. .. .+. . ...++++++++|+|+.++|
T Consensus 144 l~g~~VgIIG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~~--~~---~~~-----~----~~~l~ell~~aDvIvl~lP 209 (332)
T PRK08605 144 IKDLKVAVIGTGRIGLAVAKIFAKGYGSDVVAYDPFPNAKA--AT---YVD-----Y----KDTIEEAVEGADIVTLHMP 209 (332)
T ss_pred eCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCccHhH--Hh---hcc-----c----cCCHHHHHHhCCEEEEeCC
Confidence 44679999999999999999995444678988998765431 11 111 1 2257888899999999999
Q ss_pred CcccHHHH-----HHHHHcCCeEEEcc
Q psy12817 643 YNLHHHVA-----EFCIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~Va-----kacIeaGkh~VD~S 664 (1201)
.......+ ...++.|.-+|+++
T Consensus 210 ~t~~t~~li~~~~l~~mk~gailIN~s 236 (332)
T PRK08605 210 ATKYNHYLFNADLFKHFKKGAVFVNCA 236 (332)
T ss_pred CCcchhhhcCHHHHhcCCCCcEEEECC
Confidence 65322111 12234555566654
No 300
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.0093 Score=66.04 Aligned_cols=77 Identities=16% Similarity=0.223 Sum_probs=60.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.. .++.++.+|++| .+.+.+++++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARA-GANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADE 83 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence 3468999999 699999999999976 578999999988776654332 245678899998 7777766543
Q ss_pred ---CcEEEEcCC
Q psy12817 634 ---ADLVVSLLP 642 (1201)
Q Consensus 634 ---~DVVIs~lP 642 (1201)
.|+||++..
T Consensus 84 ~~~iD~vi~~ag 95 (264)
T PRK07576 84 FGPIDVLVSGAA 95 (264)
T ss_pred cCCCCEEEECCC
Confidence 699999874
No 301
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.011 Score=64.50 Aligned_cols=77 Identities=14% Similarity=0.159 Sum_probs=60.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS----- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~----- 633 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++..+.+|++| .+.+.+++++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFARE-GAKVVVADRDAAGGEETVALIREAGGEALFVACDVTR--DAEVKALVEQTIAAY 82 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 458999999 699999999999986 478999999988776555432 247788899998 7777776654
Q ss_pred --CcEEEEcCCC
Q psy12817 634 --ADLVVSLLPY 643 (1201)
Q Consensus 634 --~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 83 g~id~li~~ag~ 94 (253)
T PRK06172 83 GRLDYAFNNAGI 94 (253)
T ss_pred CCCCEEEECCCC
Confidence 4999999753
No 302
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=96.46 E-value=0.0078 Score=69.21 Aligned_cols=74 Identities=18% Similarity=0.239 Sum_probs=57.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-----HHHHHHHHc-----CCeeEEEeecCCCCchHHHhhccC-
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-----DIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVRS- 633 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-----kAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~~- 633 (1201)
|+|+|.| +|++|+.+++.|++. +++|++.+|+.+ +.+.+.... ++++.+..|+.| .+.+.+++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~l~~~~~~~ 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK-GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTD--SSNLRRIIDEI 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC-CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCC--HHHHHHHHHhC
Confidence 5899999 799999999999987 578998888753 233332111 247888999998 8889998885
Q ss_pred -CcEEEEcCC
Q psy12817 634 -ADLVVSLLP 642 (1201)
Q Consensus 634 -~DVVIs~lP 642 (1201)
+|+||++..
T Consensus 78 ~~d~ViH~Aa 87 (343)
T TIGR01472 78 KPTEIYNLAA 87 (343)
T ss_pred CCCEEEECCc
Confidence 599999984
No 303
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.46 E-value=0.014 Score=66.48 Aligned_cols=94 Identities=16% Similarity=0.152 Sum_probs=63.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-chHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-SDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-~e~L~elI~~~DVVIs~lP 642 (1201)
.+++|+|+|.|.||+.+++.|.+. ++.+.+.+++.+.+....+.. +++.|.- .+...+.++++|+||-|+|
T Consensus 2 ~~~~v~IvG~GliG~s~a~~l~~~-g~~v~i~g~d~~~~~~~~a~~-------lgv~d~~~~~~~~~~~~~aD~VivavP 73 (279)
T COG0287 2 ASMKVGIVGLGLMGGSLARALKEA-GLVVRIIGRDRSAATLKAALE-------LGVIDELTVAGLAEAAAEADLVIVAVP 73 (279)
T ss_pred CCcEEEEECCchHHHHHHHHHHHc-CCeEEEEeecCcHHHHHHHhh-------cCcccccccchhhhhcccCCEEEEecc
Confidence 468999999999999999999886 466666776666554433321 2232200 1123566678999999999
Q ss_pred CcccHHHHHHHH---HcCCeEEEccC
Q psy12817 643 YNLHHHVAEFCI---QHGKNLVTASY 665 (1201)
Q Consensus 643 ~~~h~~VakacI---eaGkh~VD~Sy 665 (1201)
.....++++.-. +.|+-+.|..-
T Consensus 74 i~~~~~~l~~l~~~l~~g~iv~Dv~S 99 (279)
T COG0287 74 IEATEEVLKELAPHLKKGAIVTDVGS 99 (279)
T ss_pred HHHHHHHHHHhcccCCCCCEEEeccc
Confidence 776666665443 56777778743
No 304
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.46 E-value=0.023 Score=71.37 Aligned_cols=87 Identities=15% Similarity=0.222 Sum_probs=69.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHh-hccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSG-LVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~e-lI~~~DVVIs~lP~ 643 (1201)
..+|+|+|+|++|+.+++.|.++ +.++++.|.|+++++++.+ . +...+..|.+| ++.+++ -++++|+||.+++.
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~-~-g~~v~~GDat~--~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSS-GVKMTVLDHDPDHIETLRK-F-GMKVFYGDATR--MDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHh-c-CCeEEEEeCCC--HHHHHhcCCCcCCEEEEEeCC
Confidence 47999999999999999999876 5789999999999998865 3 67889999998 777764 46789999999975
Q ss_pred c-ccHHHHHHHHHc
Q psy12817 644 N-LHHHVAEFCIQH 656 (1201)
Q Consensus 644 ~-~h~~VakacIea 656 (1201)
. .+..++..+-+.
T Consensus 475 ~~~n~~i~~~ar~~ 488 (621)
T PRK03562 475 PQTSLQLVELVKEH 488 (621)
T ss_pred HHHHHHHHHHHHHh
Confidence 3 334444444443
No 305
>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional
Probab=96.45 E-value=0.029 Score=72.61 Aligned_cols=147 Identities=20% Similarity=0.250 Sum_probs=90.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCC------CCeEE---EEeCCHHH-------HHHHHHHcCCeeEEEeecCCCCch
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDE------NIHIT---LGSLLKED-------IDKVTNEFGRVEATLIDVNNGGSD 625 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~------~~~Vt---VadR~~ek-------Ae~La~~~~~v~~v~lDV~D~~~e 625 (1201)
..+..+|+|+|+|.||+.+++.|.++. ++++. +++++... ...+....... ....+ .+
T Consensus 462 ~~~~~~i~l~G~G~VG~~~~~~l~~~~~~l~~~~~~l~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~----~~~~~--~~ 535 (819)
T PRK09436 462 SDQVLDVFVIGVGGVGGALLEQIKRQQPWLKKKNIDLRVCGIANSRKMLLDEHGIDLDNWREELAEA----GEPFD--LD 535 (819)
T ss_pred ccccccEEEEecCHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEcCCccccCCCCCCHHHHHHHHhhc----cCCCC--HH
Confidence 346799999999999999999986532 33433 34432220 11222111110 00112 34
Q ss_pred HHHhhcc----CCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc--CCh---HHHHHHHHHHHHcCCEEEeccccC---ch
Q psy12817 626 NLSGLVR----SADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLS---PEMMALHERAASAGITVLNEVGLD---PG 693 (1201)
Q Consensus 626 ~L~elI~----~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs---~e~~eLde~AkeAGVtil~e~GlD---PG 693 (1201)
.+.+.+. ..|+||.|+|...-......|+++|+|+|++. ..+ ....+|.+.|+++|+.+.-|.-+. |=
T Consensus 536 ~~~~~~~~~~~~~~vvvd~t~~~~~~~~~~~al~~g~~VVtaNK~~~a~~~~~~~el~~~a~~~~~~~~yeatV~~giPi 615 (819)
T PRK09436 536 RLIRLVKEYHLLNPVIVDCTSSQAVADQYADFLAAGFHVVTPNKKANTSSYAYYHQLREAARKSRRKFLYETNVGAGLPV 615 (819)
T ss_pred HHHHHHhhcCCCCCEEEECCCChHHHHHHHHHHHcCCEEEcCCchhccCCHHHHHHHHHHHHHcCCeEEEeeeeccccch
Confidence 4555555 36999999986433445579999999999995 233 467889899999999998775332 54
Q ss_pred hHHHHHHHHHHHhhhcCCcEEEEEeec
Q psy12817 694 IDHLLAMECIDAAHLNGGKVESFVSYC 720 (1201)
Q Consensus 694 IdhmlA~~~idei~~~ggkV~sf~s~c 720 (1201)
|+.+ .+....|.+|.++....
T Consensus 616 i~~l------~~~~~~g~~i~~i~Gil 636 (819)
T PRK09436 616 IETL------QNLLNAGDELLKFEGIL 636 (819)
T ss_pred HHHH------HHHHhccCcEEEEEEEE
Confidence 4433 23333456777766433
No 306
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.45 E-value=0.013 Score=64.95 Aligned_cols=77 Identities=17% Similarity=0.259 Sum_probs=61.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.+.++|.| +|.+|+.+++.|++. +.+|++.+|+.++++.+.+.+ .++..+.+|+.| .+.+.++++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARA-GAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD--KESLEQARQQILEDF 85 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 458899999 699999999999986 578999999988877766543 246778899998 666766554
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 86 g~id~li~~ag~ 97 (278)
T PRK08277 86 GPCDILINGAGG 97 (278)
T ss_pred CCCCEEEECCCC
Confidence 57999999753
No 307
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.44 E-value=0.016 Score=73.00 Aligned_cols=79 Identities=18% Similarity=0.314 Sum_probs=58.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhC-CCCeEEEEeCCH--HHHHHHHH--HcCCeeEEEeecCCCCchHHHhhc--cCC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRD-ENIHITLGSLLK--EDIDKVTN--EFGRVEATLIDVNNGGSDNLSGLV--RSA 634 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~-~~~~VtVadR~~--ekAe~La~--~~~~v~~v~lDV~D~~~e~L~elI--~~~ 634 (1201)
.++|||+|.| +|++|+.+++.|.++ .+++|++.+|.. ++.+.+.. ..++++.+..|+.| .+.+..++ .++
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~~~~~~~~~~~~ 81 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS--ADLVNYLLITEGI 81 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCC--hHHHHHHHhhcCC
Confidence 3568999999 799999999999976 367888888742 23333322 12468888999998 66776655 579
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||+|...
T Consensus 82 D~ViHlAa~ 90 (668)
T PLN02260 82 DTIMHFAAQ 90 (668)
T ss_pred CEEEECCCc
Confidence 999999853
No 308
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.0092 Score=66.81 Aligned_cols=78 Identities=19% Similarity=0.254 Sum_probs=62.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
.+++.++|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++..+.+|++| .+++.+++++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~-G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 80 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARR-GARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRL 80 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHH
Confidence 3467899999 799999999999987 578999999988877765543 136678899998 7788776653
Q ss_pred ---CcEEEEcCCC
Q psy12817 634 ---ADLVVSLLPY 643 (1201)
Q Consensus 634 ---~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 81 ~g~id~li~nAg~ 93 (275)
T PRK05876 81 LGHVDVVFSNAGI 93 (275)
T ss_pred cCCCCEEEECCCc
Confidence 6999999753
No 309
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.44 E-value=0.012 Score=68.09 Aligned_cols=95 Identities=21% Similarity=0.254 Sum_probs=61.9
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHH----HcCCee--EEEeecCC
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTN----EFGRVE--ATLIDVNN 621 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~----~~~~v~--~v~lDV~D 621 (1201)
||+|+|+|.+|..+++.|+..+--+++++|.+. .|++.+++ ..|.++ +...++.+
T Consensus 1 kVlIVGaGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~ 80 (312)
T cd01489 1 KVLVVGAGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD 80 (312)
T ss_pred CEEEECCCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence 699999999999999999987766788887432 23333332 224433 33344443
Q ss_pred CCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEc
Q psy12817 622 GGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 622 ~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~ 663 (1201)
.....+++++.|+||+|+-. .....+-+.|.+.++.+++.
T Consensus 81 --~~~~~~f~~~~DvVv~a~Dn~~ar~~in~~c~~~~ip~I~~ 121 (312)
T cd01489 81 --PDFNVEFFKQFDLVFNALDNLAARRHVNKMCLAADVPLIES 121 (312)
T ss_pred --ccchHHHHhcCCEEEECCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 22334778899999999842 22344566777777776664
No 310
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.0062 Score=67.19 Aligned_cols=72 Identities=21% Similarity=0.203 Sum_probs=59.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC-------CcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS-------ADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~-------~DV 636 (1201)
+++|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++.+.. .++..+.+|++| .+++++++++ .|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~----~~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARA-GYRVFGTSRNPARAAPI----PGVELLELDVTD--DASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCChhhcccc----CCCeeEEeecCC--HHHHHHHHHHHHHhCCCCCE
Confidence 46899999 799999999999987 57899999998765432 367889999998 8888887764 699
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 77 li~~ag~ 83 (270)
T PRK06179 77 LVNNAGV 83 (270)
T ss_pred EEECCCC
Confidence 9999854
No 311
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.015 Score=67.31 Aligned_cols=78 Identities=18% Similarity=0.217 Sum_probs=62.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
..+++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.++. .++..+.+|++| .++++++++
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~-G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~ 82 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARR-GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEE 82 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence 3467899999 699999999999987 578999999998887766543 246778899998 777776654
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 83 ~g~iD~lInnAg~ 95 (334)
T PRK07109 83 LGPIDTWVNNAMV 95 (334)
T ss_pred CCCCCEEEECCCc
Confidence 57999999754
No 312
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.012 Score=64.49 Aligned_cols=76 Identities=18% Similarity=0.314 Sum_probs=60.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++.+++.+.. .++..+.+|+.| .+.+.++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA-GAQLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFG 77 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence 46899999 699999999999876 478999999988776655432 246678899998 777776665
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 78 ~id~vi~~ag~ 88 (263)
T PRK06181 78 GIDILVNNAGI 88 (263)
T ss_pred CCCEEEECCCc
Confidence 57999999743
No 313
>PF04455 Saccharop_dh_N: LOR/SDH bifunctional enzyme conserved region ; InterPro: IPR007545 Lysine-oxoglutarate reductase/Saccharopine dehydrogenase (LOR/SDH) is a bifunctional enzyme. This conserved region is commonly found immediately N-terminal to saccharopine dehydrogenase conserved region (IPR005097 from INTERPRO) in eukaryotes [, ].; PDB: 3C2Q_B 3MGJ_A.
Probab=96.44 E-value=0.00023 Score=69.37 Aligned_cols=43 Identities=16% Similarity=0.109 Sum_probs=30.6
Q ss_pred ccccccchhccccCCCCcccccCCChhHHHHHHhccCCcCCccccchhhhhhhhcccccc
Q psy12817 499 DIDKDKFISFVQSDASKPIEEHNFSPAVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKA 558 (1201)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~s~~ 558 (1201)
+++|||||++++|.++|.|.++| | +|+..+|.++++-++.||+
T Consensus 7 eL~GHLiDSgil~~vLD~I~d~G-------------G----~F~i~~~~vG~~~~d~S~a 49 (103)
T PF04455_consen 7 ELEGHLIDSGILNRVLDIIMDMG-------------G----DFEILEFDVGKSKDDTSYA 49 (103)
T ss_dssp EEEE--TTSSHHHHHHHHHHHTT------------------EEEEEEEE--SSTTS-EEE
T ss_pred EEEEeeechhhHHHHHHHHHhcC-------------C----CEEEEEEEeCCCCCCceeE
Confidence 45679999999999777666654 7 9999999999999888884
No 314
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.013 Score=63.54 Aligned_cols=76 Identities=14% Similarity=0.254 Sum_probs=59.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+++++|.| +|.+|+.+++.|++.+ .+|++.+|+.++++++.... + ++..+.+|++| .+.+.++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKG-RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 47899999 7999999999999874 78999999998877665432 2 46678899998 777766554
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~~~id~vi~~ag~ 91 (248)
T PRK08251 79 LGGLDRVIVNAGI 91 (248)
T ss_pred cCCCCEEEECCCc
Confidence 57999998753
No 315
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.42 E-value=0.014 Score=62.86 Aligned_cols=77 Identities=21% Similarity=0.367 Sum_probs=61.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
++++++|.| +|.+|+.+++.|++++ ..|++.+|+.++++++....+ ++..+.+|+.| .+.+.++++ ..
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQG-AIVGLHGTRVEKLEALAAELGERVKIFPANLSD--RDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 468999999 7999999999999874 688888999888887765542 46778899998 777776643 47
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12936 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999999753
No 316
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.011 Score=64.59 Aligned_cols=74 Identities=16% Similarity=0.366 Sum_probs=59.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
|+++|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.. .++..+.+|++| ++.+.++++ .
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEE-GANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN--PEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhCC
Confidence 6899999 689999999999986 568999999988877765543 246778899998 777776554 4
Q ss_pred CcEEEEcCC
Q psy12817 634 ADLVVSLLP 642 (1201)
Q Consensus 634 ~DVVIs~lP 642 (1201)
.|+||++..
T Consensus 79 id~lI~~ag 87 (252)
T PRK07677 79 IDALINNAA 87 (252)
T ss_pred ccEEEECCC
Confidence 699999975
No 317
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.011 Score=65.64 Aligned_cols=76 Identities=16% Similarity=0.227 Sum_probs=61.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
++.|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++++.+.+..+ .+..+.+|++| .+.+.++++ ..|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALER-GDRVVATARDTATLADLAEKYGDRLLPLALDVTD--RAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 46899999 799999999999887 5789999999988887766543 46778899998 777766654 469
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 80 ~vi~~ag~ 87 (275)
T PRK08263 80 IVVNNAGY 87 (275)
T ss_pred EEEECCCC
Confidence 99999853
No 318
>PRK08264 short chain dehydrogenase; Validated
Probab=96.41 E-value=0.012 Score=63.54 Aligned_cols=75 Identities=16% Similarity=0.195 Sum_probs=60.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc---CCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---SADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---~~DVVIs 639 (1201)
..++|+|+| +|.+|+.+++.|++.+..+|++++|+.+++++ .-.++.++..|+.| .+.+.++++ ..|+||+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~--~~~~~~~~~~~~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD--PASVAAAAEAASDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC--HHHHHHHHHhcCCCCEEEE
Confidence 357899999 79999999999998753389999999887664 12357888999998 778877776 4799999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 80 ~ag~ 83 (238)
T PRK08264 80 NAGI 83 (238)
T ss_pred CCCc
Confidence 9854
No 319
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.41 E-value=0.013 Score=64.09 Aligned_cols=78 Identities=14% Similarity=0.212 Sum_probs=61.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.++++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++.+.+.+ .++..+.+|++| .+.+.++++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 85 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGA-GAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAE 85 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence 4578999999 699999999999986 579999999988776665433 247788999998 777766654
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 86 ~~~id~vi~~ag~ 98 (256)
T PRK06124 86 HGRLDILVNNVGA 98 (256)
T ss_pred cCCCCEEEECCCC
Confidence 35899998753
No 320
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.013 Score=64.52 Aligned_cols=77 Identities=17% Similarity=0.294 Sum_probs=61.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc------C
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR------S 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~------~ 633 (1201)
+.++|+|.| +|.+|+.+++.|+++ +.+|++++|+.++++.+.... .++..+.+|+.| .+.+.++++ .
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAA-GARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS--EAGREAVLARAREMGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHhcCC
Confidence 357899999 799999999999987 578999999998887766542 257788899998 777665543 5
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 7999999753
No 321
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.38 E-value=0.015 Score=64.70 Aligned_cols=95 Identities=16% Similarity=0.107 Sum_probs=60.9
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHH----HcCCe--eEEEeecCC
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTN----EFGRV--EATLIDVNN 621 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~----~~~~v--~~v~lDV~D 621 (1201)
||+|+|+|.+|..+++.|+..+--+++++|.+. .|++.+++ ..|.+ .+...++.+
T Consensus 1 kVlvvG~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~ 80 (234)
T cd01484 1 KVLLVGAGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP 80 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence 699999999999999999998666788887542 13333222 23443 334344432
Q ss_pred CCchH-HHhhccCCcEEEEcCCCcc-cHHHHHHHHHcCCeEEEc
Q psy12817 622 GGSDN-LSGLVRSADLVVSLLPYNL-HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 622 ~~~e~-L~elI~~~DVVIs~lP~~~-h~~VakacIeaGkh~VD~ 663 (1201)
.+. -.+++++.|+||+|+-... ...+.+.|.+.++.+++.
T Consensus 81 --~~~~~~~f~~~~DvVi~a~Dn~~aR~~ln~~c~~~~iplI~~ 122 (234)
T cd01484 81 --EQDFNDTFFEQFHIIVNALDNIIARRYVNGMLIFLIVPLIES 122 (234)
T ss_pred --hhhchHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 122 2467889999999985432 234556666666666664
No 322
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.38 E-value=0.015 Score=63.07 Aligned_cols=75 Identities=16% Similarity=0.240 Sum_probs=58.6
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhh-------cc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGL-------VR 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~el-------I~ 632 (1201)
+++|+|.| +|.+|+.+++.|.++ +.+|++++|+.++.+++.... .++..+.+|+.| .+++.++ +.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA-GANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFG 77 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcC
Confidence 46899999 699999999999987 468999999988877766543 246778899998 7755443 34
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 78 ~~d~vi~~a~ 87 (255)
T TIGR01963 78 GLDILVNNAG 87 (255)
T ss_pred CCCEEEECCC
Confidence 5799999874
No 323
>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Probab=96.36 E-value=0.031 Score=67.23 Aligned_cols=121 Identities=15% Similarity=0.199 Sum_probs=83.0
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCC-CeEE--EEeCCHHHHHHHHHHcCCeeEEEe-ecC------------------
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDEN-IHIT--LGSLLKEDIDKVTNEFGRVEATLI-DVN------------------ 620 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~-~~Vt--VadR~~ekAe~La~~~~~v~~v~l-DV~------------------ 620 (1201)
.+|||.|+|+ |.||..+++-+.+.++ ++|. .+.++.+.+.+.+.+|. -+.+.+ |-.
T Consensus 56 ~~KkI~ILGSTGSIGtqtLdVI~~~pd~f~vvaLaag~Ni~lL~~q~~~f~-p~~v~v~d~~~~~~l~~~l~~~~~~~~v 134 (454)
T PLN02696 56 GPKPISLLGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQVRKFK-PKLVAVRNESLVDELKEALADLDDKPEI 134 (454)
T ss_pred CccEEEEecCCcHhhHHHHHHHHhCccccEEEEEECCCCHHHHHHHHHHhC-CCEEEEcCHHHHHHHHHhhcCCCCCcEE
Confidence 4589999996 9999999999887644 5543 45677877777777662 222211 110
Q ss_pred -CCCchHHHhhcc--CCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEe
Q psy12817 621 -NGGSDNLSGLVR--SADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 621 -D~~~e~L~elI~--~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~ 686 (1201)
- ..+.+.+++. ++|+||+++-......-..+||++|+++..+. -+...-..+.+.|++.|+.+++
T Consensus 135 l~-G~egl~~la~~~evDiVV~AIvG~aGL~pTl~AIkaGK~VALANKESLV~aG~lI~~~ak~~~~~IlP 204 (454)
T PLN02696 135 IP-GEEGIVEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHGVKILP 204 (454)
T ss_pred EE-CHHHHHHHHcCCCCCEEEEeCccccchHHHHHHHHCCCcEEEecHHHHHhhHHHHHHHHHHcCCeEee
Confidence 0 0245566665 57999999976656555688999999988874 2223334566778999999988
No 324
>PRK14851 hypothetical protein; Provisional
Probab=96.36 E-value=0.016 Score=73.33 Aligned_cols=98 Identities=14% Similarity=0.204 Sum_probs=70.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHH----cCC--eeEEEe
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNE----FGR--VEATLI 617 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~----~~~--v~~v~l 617 (1201)
.+..+|+|+|+|.+|..++.+|++.+--+++++|.+. .|++.+++. .|. ++++..
T Consensus 41 L~~~~VlIvG~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~ 120 (679)
T PRK14851 41 LAEAKVAIPGMGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPA 120 (679)
T ss_pred HhcCeEEEECcCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEec
Confidence 5578999999999999999999998655677776421 133333332 244 334444
Q ss_pred ecCCCCchHHHhhccCCcEEEEcCCCc-c--cHHHHHHHHHcCCeEEEc
Q psy12817 618 DVNNGGSDNLSGLVRSADLVVSLLPYN-L--HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 618 DV~D~~~e~L~elI~~~DVVIs~lP~~-~--h~~VakacIeaGkh~VD~ 663 (1201)
.++ .+.+.++++++|+||+|+-+. + ...+.+.|.+.++.+|+.
T Consensus 121 ~i~---~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~iP~i~~ 166 (679)
T PRK14851 121 GIN---ADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKGIPVITA 166 (679)
T ss_pred CCC---hHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCCCCEEEe
Confidence 454 467888999999999999642 2 245788999999999976
No 325
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.36 E-value=0.0077 Score=70.25 Aligned_cols=92 Identities=20% Similarity=0.187 Sum_probs=64.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..+||.|+| +|++|+.+++.|.+ .+..++..+....+.-+.+. +.+. ...+. + .+.. .++++|+|+.|
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~--~~~~-~~~v~--~--~~~~--~~~~~Dvvf~a 73 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR--FGGK-SVTVQ--D--AAEF--DWSQAQLAFFV 73 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE--ECCc-ceEEE--e--Cchh--hccCCCEEEEC
Confidence 457999999 69999999999998 67788665543322222222 2121 11121 1 1111 12579999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|.....+++..+.++|+.+||.|
T Consensus 74 ~p~~~s~~~~~~~~~~g~~VIDlS 97 (336)
T PRK08040 74 AGREASAAYAEEATNAGCLVIDSS 97 (336)
T ss_pred CCHHHHHHHHHHHHHCCCEEEECC
Confidence 999888999999999999999997
No 326
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.35 E-value=0.019 Score=65.45 Aligned_cols=77 Identities=17% Similarity=0.225 Sum_probs=53.5
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----------CCeeE-------EEeecCCCCchH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----------GRVEA-------TLIDVNNGGSDN 626 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----------~~v~~-------v~lDV~D~~~e~ 626 (1201)
.++||.|||+|.||..++..++.. +++|++.|++++.+++..+.. ...+. -.+.+.+ +
T Consensus 4 ~~~~V~ViGaG~mG~~iA~~~a~~-G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~----~ 78 (286)
T PRK07819 4 AIQRVGVVGAGQMGAGIAEVCARA-GVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTT----D 78 (286)
T ss_pred CccEEEEEcccHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeC----C
Confidence 357999999999999999999876 689999999999876622211 01100 0011122 3
Q ss_pred HHhhccCCcEEEEcCCCccc
Q psy12817 627 LSGLVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 627 L~elI~~~DVVIs~lP~~~h 646 (1201)
+ +.++++|+||.|+|-...
T Consensus 79 ~-~~~~~~d~ViEav~E~~~ 97 (286)
T PRK07819 79 L-GDFADRQLVIEAVVEDEA 97 (286)
T ss_pred H-HHhCCCCEEEEecccCHH
Confidence 4 346899999999997654
No 327
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.014 Score=66.64 Aligned_cols=77 Identities=9% Similarity=0.126 Sum_probs=61.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
.+.+.++|.| +|.+|..+++.|++. +.+|++++|+.+++++..+++ + ++.++.+|+.| .++++++++
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~ 88 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAA-GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLR 88 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHH
Confidence 4568999999 699999999999987 579999999988776655432 2 46778999998 777776654
Q ss_pred ----CCcEEEEcCC
Q psy12817 633 ----SADLVVSLLP 642 (1201)
Q Consensus 633 ----~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 89 ~~~~~iD~li~nAG 102 (313)
T PRK05854 89 AEGRPIHLLINNAG 102 (313)
T ss_pred HhCCCccEEEECCc
Confidence 3799999875
No 328
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.35 E-value=0.0073 Score=70.51 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=65.1
Q ss_pred eEEEEc-CchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
||+|+| +|++|+.+++.|.+ .+..++.+..+..+..+.+. +.+......|+. .. .++++|+|+.|+|.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~--~~~~~~~~~~~~------~~-~~~~~D~v~~a~g~ 71 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT--FKGKELEVNEAK------IE-SFEGIDIALFSAGG 71 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee--eCCeeEEEEeCC------hH-HhcCCCEEEECCCH
Confidence 689999 79999999999988 45566666655544434333 223344444432 12 23689999999999
Q ss_pred cccHHHHHHHHHcCCeEEEcc
Q psy12817 644 NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~S 664 (1201)
....+++...+++|+.+||.|
T Consensus 72 ~~s~~~a~~~~~~G~~VID~s 92 (339)
T TIGR01296 72 SVSKEFAPKAAKCGAIVIDNT 92 (339)
T ss_pred HHHHHHHHHHHHCCCEEEECC
Confidence 888999999999999999986
No 329
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.35 E-value=0.014 Score=64.00 Aligned_cols=78 Identities=14% Similarity=0.192 Sum_probs=61.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|..+++.|++. +.+|++++|+.++++.+.... .++..+.+|++| .+.++++++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~ 86 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEA-GARVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLER 86 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 4568999999 799999999999986 578999999988776655433 246678899998 777765553
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 87 ~~~id~vi~~ag~ 99 (259)
T PRK08213 87 FGHVDILVNNAGA 99 (259)
T ss_pred hCCCCEEEECCCC
Confidence 47999999864
No 330
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.34 E-value=0.013 Score=64.16 Aligned_cols=77 Identities=14% Similarity=0.225 Sum_probs=61.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
..++++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++..+. .++..+.+|+.| .+.+.+++.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~-G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEY-GAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH--KQEVEAAIEHIEKDI 84 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC--HHHHHHHHHHHHHhc
Confidence 467899999 699999999999986 578999999988877766543 235667899998 777776654
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 85 ~~id~vi~~ag~ 96 (254)
T PRK08085 85 GPIDVLINNAGI 96 (254)
T ss_pred CCCCEEEECCCc
Confidence 37999999853
No 331
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.014 Score=62.75 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=60.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc---c--CCcEEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV---R--SADLVV 638 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI---~--~~DVVI 638 (1201)
|++++|.| +|.+|+.+++.|++. +.+|++++|+.+.++++... ++..+.+|++| .+.+++++ . ..|+||
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~-G~~v~~~~r~~~~~~~~~~~--~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD-GWRVIATARDAAALAALQAL--GAEALALDVAD--PASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC-CCEEEEEECCHHHHHHHHhc--cceEEEecCCC--HHHHHHHHHHhcCCCCCEEE
Confidence 67899999 799999999999876 67899999999888776642 56788999998 77777653 2 379999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 76 ~~ag~ 80 (222)
T PRK06953 76 YVAGV 80 (222)
T ss_pred ECCCc
Confidence 98753
No 332
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.019 Score=64.86 Aligned_cols=78 Identities=22% Similarity=0.312 Sum_probs=62.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhcc------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.++ .+..+.+|++| .+++.++++
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHAR-GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERF 83 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHc
Confidence 3468999999 699999999999886 5789999999999888877653 24455699998 777766653
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 84 g~id~vI~nAG~ 95 (296)
T PRK05872 84 GGIDVVVANAGI 95 (296)
T ss_pred CCCCEEEECCCc
Confidence 47999999853
No 333
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=96.32 E-value=0.023 Score=64.80 Aligned_cols=74 Identities=16% Similarity=0.171 Sum_probs=53.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHH----HHHHHHc-CCeeEEEeecCCCCchHHHhhcc--CCcEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDI----DKVTNEF-GRVEATLIDVNNGGSDNLSGLVR--SADLV 637 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekA----e~La~~~-~~v~~v~lDV~D~~~e~L~elI~--~~DVV 637 (1201)
|||+|+| +|++|+.+++.|.+. +.+|++++|..... ..+.... .++..+..|+.| .+.+.++++ ++|+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~d~v 77 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN-GHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN--EALLTEILHDHAIDTV 77 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCC--HHHHHHHHhcCCCCEE
Confidence 5899999 699999999999986 57888887642211 1111111 235667899998 778888776 58999
Q ss_pred EEcCC
Q psy12817 638 VSLLP 642 (1201)
Q Consensus 638 Is~lP 642 (1201)
|++..
T Consensus 78 vh~a~ 82 (338)
T PRK10675 78 IHFAG 82 (338)
T ss_pred EECCc
Confidence 99974
No 334
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.31 E-value=0.013 Score=67.80 Aligned_cols=73 Identities=21% Similarity=0.288 Sum_probs=54.0
Q ss_pred cccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 559 DIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 559 ~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
+++..+.++|+|||.|.+|+++++.|... +++|++.+|.. +....+... +++. ..+.++++++|+|+
T Consensus 10 ~~~~LkgKtVGIIG~GsIG~amA~nL~d~-G~~ViV~~r~~-~s~~~A~~~-G~~v----------~sl~Eaak~ADVV~ 76 (335)
T PRK13403 10 NVELLQGKTVAVIGYGSQGHAQAQNLRDS-GVEVVVGVRPG-KSFEVAKAD-GFEV----------MSVSEAVRTAQVVQ 76 (335)
T ss_pred ChhhhCcCEEEEEeEcHHHHHHHHHHHHC-cCEEEEEECcc-hhhHHHHHc-CCEE----------CCHHHHHhcCCEEE
Confidence 34456789999999999999999999875 68999988763 333333332 3321 14778888999999
Q ss_pred EcCCCc
Q psy12817 639 SLLPYN 644 (1201)
Q Consensus 639 s~lP~~ 644 (1201)
.++|..
T Consensus 77 llLPd~ 82 (335)
T PRK13403 77 MLLPDE 82 (335)
T ss_pred EeCCCh
Confidence 999963
No 335
>PLN02572 UDP-sulfoquinovose synthase
Probab=96.29 E-value=0.018 Score=69.32 Aligned_cols=77 Identities=18% Similarity=0.251 Sum_probs=57.0
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH--------------------HHHHHHHH-cCCeeEEEeec
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE--------------------DIDKVTNE-FGRVEATLIDV 619 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e--------------------kAe~La~~-~~~v~~v~lDV 619 (1201)
..++|+|+|.| +|++|+.+++.|+++ +++|+++|+... +++.+... -.+++.+..|+
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 122 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKR-GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI 122 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence 35678999999 799999999999986 578888764211 11111111 12578889999
Q ss_pred CCCCchHHHhhccC--CcEEEEcC
Q psy12817 620 NNGGSDNLSGLVRS--ADLVVSLL 641 (1201)
Q Consensus 620 ~D~~~e~L~elI~~--~DVVIs~l 641 (1201)
.| .+.+.+++++ +|+||++.
T Consensus 123 ~d--~~~v~~~l~~~~~D~ViHlA 144 (442)
T PLN02572 123 CD--FEFLSEAFKSFEPDAVVHFG 144 (442)
T ss_pred CC--HHHHHHHHHhCCCCEEEECC
Confidence 98 8889888874 79999987
No 336
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.29 E-value=0.01 Score=69.22 Aligned_cols=83 Identities=16% Similarity=0.165 Sum_probs=58.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEE--------EeecCCCCchHHHhhccCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEAT--------LIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v--------~lDV~D~~~e~L~elI~~~ 634 (1201)
..|+||.|||+|.+|..++..|++.+ ++++..|+++.++.+.+...+.... .+.++ .++.+.++++
T Consensus 5 ~~~mkI~IiGaGa~G~alA~~La~~g--~v~l~~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t----~d~~~a~~~a 78 (341)
T PRK12439 5 KREPKVVVLGGGSWGTTVASICARRG--PTLQWVRSAETADDINDNHRNSRYLGNDVVLSDTLRAT----TDFAEAANCA 78 (341)
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCC--CEEEEeCCHHHHHHHHhcCCCcccCCCCcccCCCeEEE----CCHHHHHhcC
Confidence 45789999999999999999999875 4667779999888877542111110 11222 2455667899
Q ss_pred cEEEEcCCCcccHHHHH
Q psy12817 635 DLVVSLLPYNLHHHVAE 651 (1201)
Q Consensus 635 DVVIs~lP~~~h~~Vak 651 (1201)
|+||.++|......+++
T Consensus 79 DlVilavps~~~~~vl~ 95 (341)
T PRK12439 79 DVVVMGVPSHGFRGVLT 95 (341)
T ss_pred CEEEEEeCHHHHHHHHH
Confidence 99999999665544444
No 337
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.28 E-value=0.014 Score=63.88 Aligned_cols=76 Identities=17% Similarity=0.225 Sum_probs=59.6
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++.+.+.... .++..+.+|++| .+.+..++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 78 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE-GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS--EQSVLALSRGVDEI 78 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC--HHHHHHHHHHHHHH
Confidence 46799999 699999999999987 578999999988776665432 247788999998 777766654
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~~~id~vv~~ag~ 91 (259)
T PRK12384 79 FGRVDLLVYNAGI 91 (259)
T ss_pred cCCCCEEEECCCc
Confidence 46999999753
No 338
>PRK08589 short chain dehydrogenase; Validated
Probab=96.25 E-value=0.014 Score=64.84 Aligned_cols=76 Identities=11% Similarity=0.249 Sum_probs=59.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
++|+++|.| +|.+|+.+++.|++. +.+|++++|+ ++++++.+.+ .++..+.+|++| .+++.++++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~-G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQE-GAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQF 80 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence 468999999 699999999999987 5789999999 6666555443 247788999998 777766554
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 81 g~id~li~~Ag~ 92 (272)
T PRK08589 81 GRVDVLFNNAGV 92 (272)
T ss_pred CCcCEEEECCCC
Confidence 36999999753
No 339
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=96.25 E-value=0.027 Score=63.60 Aligned_cols=80 Identities=18% Similarity=0.192 Sum_probs=53.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeE----EEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEA----TLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~----v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
|||+|||+|.+|..++..|.+. +.+|++.+|+.+..+.+.+. +... ....+.- .++..+. +++|+||.|+
T Consensus 1 m~I~IiG~G~~G~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~--g~~~~~~~~~~~~~~--~~~~~~~-~~~d~vila~ 74 (304)
T PRK06522 1 MKIAILGAGAIGGLFGAALAQA-GHDVTLVARRGAHLDALNEN--GLRLEDGEITVPVLA--ADDPAEL-GPQDLVILAV 74 (304)
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEECChHHHHHHHHc--CCcccCCceeecccC--CCChhHc-CCCCEEEEec
Confidence 5899999999999999999976 57899999988887776643 2211 0000000 1123333 7899999999
Q ss_pred CCcccHHHHH
Q psy12817 642 PYNLHHHVAE 651 (1201)
Q Consensus 642 P~~~h~~Vak 651 (1201)
|......+++
T Consensus 75 k~~~~~~~~~ 84 (304)
T PRK06522 75 KAYQLPAALP 84 (304)
T ss_pred ccccHHHHHH
Confidence 8654444333
No 340
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=96.25 E-value=0.023 Score=63.62 Aligned_cols=74 Identities=19% Similarity=0.287 Sum_probs=54.0
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHH--cCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNE--FGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~--~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
||+|+| +|++|+.+++.|.+. +.+|++.+|.... .+.+... .++++.+..|+.+ .+.+.++++ +.|+||++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~-g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~d~vv~~ 77 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES-GHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRD--RELLDRLFEEHKIDAVIHF 77 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC-CCeEEEEeCCCccchhhhhhhccccceEEEECCCCC--HHHHHHHHHhCCCcEEEEC
Confidence 689999 799999999999886 4678777654322 2222211 1246678899998 788888876 68999999
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 78 ag~ 80 (328)
T TIGR01179 78 AGL 80 (328)
T ss_pred ccc
Confidence 854
No 341
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.25 E-value=0.015 Score=62.64 Aligned_cols=77 Identities=10% Similarity=0.271 Sum_probs=60.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhccC------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVRS------ 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~~------ 633 (1201)
+.++|+|.| +|.+|..+++.|.+. +.+|++.+|+.++++.+.... .++..+..|+.| .+.+.+++++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKE-GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS--TESARNVIEKAAKVLN 80 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 357999999 699999999999876 578999999998887764433 256788899998 7777665543
Q ss_pred -CcEEEEcCCC
Q psy12817 634 -ADLVVSLLPY 643 (1201)
Q Consensus 634 -~DVVIs~lP~ 643 (1201)
.|.+|++...
T Consensus 81 ~id~ii~~ag~ 91 (238)
T PRK05786 81 AIDGLVVTVGG 91 (238)
T ss_pred CCCEEEEcCCC
Confidence 5888888753
No 342
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=96.25 E-value=0.014 Score=64.76 Aligned_cols=57 Identities=25% Similarity=0.434 Sum_probs=47.8
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCC--cEEEEcCCC
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSA--DLVVSLLPY 643 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~--DVVIs~lP~ 643 (1201)
||+|+| +|++|+.+++.|.+. +++|++.+|. ..|+.| .+.+.++++++ |+||+|...
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~-g~~v~~~~r~-----------------~~d~~~--~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE-GRVVVALTSS-----------------QLDLTD--PEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc-CCEEEEeCCc-----------------ccCCCC--HHHHHHHHHhCCCCEEEECCcc
Confidence 689999 699999999999986 5789988885 257777 78898888876 999999853
No 343
>PLN02928 oxidoreductase family protein
Probab=96.25 E-value=0.011 Score=69.16 Aligned_cols=110 Identities=9% Similarity=-0.029 Sum_probs=71.3
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccc-cccccCcccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDY-QEYNENPSLY 270 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~-~ey~~~pe~y 270 (1201)
.+.-.++.|+|.|++|+...+.++.+|. ++.+|+....... ....+-+... ..+.. +.+
T Consensus 156 ~l~gktvGIiG~G~IG~~vA~~l~afG~----------------~V~~~dr~~~~~~--~~~~~~~~~~~~~~~~--~~~ 215 (347)
T PLN02928 156 TLFGKTVFILGYGAIGIELAKRLRPFGV----------------KLLATRRSWTSEP--EDGLLIPNGDVDDLVD--EKG 215 (347)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhCCC----------------EEEEECCCCChhh--hhhhcccccccccccc--ccC
Confidence 4556899999999999999999999994 3455543211111 0000000000 00000 000
Q ss_pred cchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCC
Q psy12817 271 RSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGS 342 (1201)
Q Consensus 271 ~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGs 342 (1201)
...-.+++++.+|+|++++-..+.+-.+|+.+.++. |||| ++|++++ .|+-
T Consensus 216 ~~~~L~ell~~aDiVvl~lPlt~~T~~li~~~~l~~-Mk~g------------------a~lINva--RG~l 266 (347)
T PLN02928 216 GHEDIYEFAGEADIVVLCCTLTKETAGIVNDEFLSS-MKKG------------------ALLVNIA--RGGL 266 (347)
T ss_pred cccCHHHHHhhCCEEEECCCCChHhhcccCHHHHhc-CCCC------------------eEEEECC--Cccc
Confidence 001124678899999999998888899999999999 9999 8999987 4443
No 344
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.076 Score=57.27 Aligned_cols=77 Identities=21% Similarity=0.310 Sum_probs=56.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC----CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc--
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL----LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR----~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
++++|+|.| +|.+|+.+++.|+++ +.+|++.+| +.+..+.+..+. .++..+..|+.| .+.+.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~ 81 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAAD-GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRD--FAATRAALDAG 81 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHH
Confidence 458999999 799999999999986 567777554 445555444332 246788899998 777776653
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 82 ~~~~~~~d~vi~~ag~ 97 (249)
T PRK12827 82 VEEFGRLDILVNNAGI 97 (249)
T ss_pred HHHhCCCCEEEECCCC
Confidence 57999999853
No 345
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=96.24 E-value=0.023 Score=63.31 Aligned_cols=77 Identities=16% Similarity=0.276 Sum_probs=64.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhc-------cCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLV-------RSA 634 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI-------~~~ 634 (1201)
.|-|+|-| +..+|.++++.|++. +++|.++.|..+++++++.+++ .+.+..+||+| .+++++++ .+.
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~-G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEA-GAKVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHC-CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCcc
Confidence 45678889 579999999999986 6899999999999999999996 47889999999 76655554 468
Q ss_pred cEEEEcCCCc
Q psy12817 635 DLVVSLLPYN 644 (1201)
Q Consensus 635 DVVIs~lP~~ 644 (1201)
|++||-..-.
T Consensus 83 DiLvNNAGl~ 92 (246)
T COG4221 83 DILVNNAGLA 92 (246)
T ss_pred cEEEecCCCC
Confidence 9999987543
No 346
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.24 E-value=0.018 Score=67.09 Aligned_cols=68 Identities=18% Similarity=0.239 Sum_probs=51.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||.|.||+.+++.|... +.+|.++||+..... ...+ ++. ...++++++++|+|+.++|
T Consensus 148 L~gktvgIiG~G~IG~~vA~~l~~~-G~~V~~~d~~~~~~~--~~~~-~~~----------~~~l~ell~~aDiV~l~lP 213 (333)
T PRK13243 148 VYGKTIGIIGFGRIGQAVARRAKGF-GMRILYYSRTRKPEA--EKEL-GAE----------YRPLEELLRESDFVSLHVP 213 (333)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC-CCEEEEECCCCChhh--HHHc-CCE----------ecCHHHHHhhCCEEEEeCC
Confidence 4579999999999999999999876 578999999865432 2222 221 1247788899999999999
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 214 ~t 215 (333)
T PRK13243 214 LT 215 (333)
T ss_pred CC
Confidence 64
No 347
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=96.23 E-value=0.026 Score=62.53 Aligned_cols=113 Identities=16% Similarity=0.228 Sum_probs=74.1
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeC----------CHHHHHHHHHHcCCeeEE--EeecCCCCchHHH
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSL----------LKEDIDKVTNEFGRVEAT--LIDVNNGGSDNLS 628 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR----------~~ekAe~La~~~~~v~~v--~lDV~D~~~e~L~ 628 (1201)
+.+.++|+|.|.|.||+.+++.|.+. +.+|+ |+|. +.+++.+.......+... ...+. .+.+-
T Consensus 28 ~l~~~~v~I~G~G~VG~~~a~~L~~~-g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~~~~~---~~~i~ 103 (227)
T cd01076 28 GLAGARVAIQGFGNVGSHAARFLHEA-GAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERIT---NEELL 103 (227)
T ss_pred CccCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCceecC---Cccce
Confidence 45679999999999999999999886 57765 8888 777777665544221110 00111 22333
Q ss_pred hhccCCcEEEEcCC-CcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEe
Q psy12817 629 GLVRSADLVVSLLP-YNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 629 elI~~~DVVIs~lP-~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~ 686 (1201)
.. ++|++|-|.+ ...+..-+. +.++.+|... .++++ -++.-+++|+.+++
T Consensus 104 ~~--~~Dvlip~a~~~~i~~~~~~---~l~a~~I~egAN~~~t~~---a~~~L~~rGi~~~P 157 (227)
T cd01076 104 EL--DCDILIPAALENQITADNAD---RIKAKIIVEAANGPTTPE---ADEILHERGVLVVP 157 (227)
T ss_pred ee--cccEEEecCccCccCHHHHh---hceeeEEEeCCCCCCCHH---HHHHHHHCCCEEEC
Confidence 32 7999999984 445655444 3356777764 34443 33446789999987
No 348
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.017 Score=63.61 Aligned_cols=77 Identities=17% Similarity=0.249 Sum_probs=59.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH----cC--CeeEEEeecCCCCchHHHhhcc----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE----FG--RVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~----~~--~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
+.+.++|.| +|.+|+.+++.|++. +.+|++++|+.+++++..+. ++ ++..+.+|++| .+++.++++
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEA-GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 457899999 689999999999987 57899999998877665443 22 35678899998 777766553
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 46999999853
No 349
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.21 E-value=0.019 Score=62.23 Aligned_cols=75 Identities=12% Similarity=0.223 Sum_probs=58.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEE-EeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITL-GSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtV-adR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+++++|.| +|.+|+.+++.|++. +.+|++ .+|+.++++++.+.. .++..+.+|++| ++++.++++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~-g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEE-GYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD--VEKIKEMFAQIDEEF 80 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 47899999 799999999999987 466654 688887776655433 246778899998 777777665
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 81 ~~id~vi~~ag 91 (250)
T PRK08063 81 GRLDVFVNNAA 91 (250)
T ss_pred CCCCEEEECCC
Confidence 4799999875
No 350
>TIGR02130 dapB_plant dihydrodipicolinate reductase. This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.
Probab=96.20 E-value=0.038 Score=62.84 Aligned_cols=126 Identities=13% Similarity=0.157 Sum_probs=79.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhccC-Cc-EEEEcC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS-AD-LVVSLL 641 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~-~D-VVIs~l 641 (1201)
.||+|.| .|+||+.+++.+.+ .+++++-+..+.. ..+.+.. +.+......-.+| ....+.+++.. +| |||+-+
T Consensus 1 ~~V~V~Ga~GkMG~~v~~av~~-~~~~Lv~~~~~~~~~~~~~~~-~~g~~v~v~~~~~-~~~~l~~~~~~~~d~VvIDFT 77 (275)
T TIGR02130 1 IQIMVNGCPGKMGKAVAEAADA-AGLEIVPTSFGGEEEAENEAE-VAGKEILLHGPSE-REARIGEVFAKYPELICIDYT 77 (275)
T ss_pred CeEEEeCCCChHHHHHHHHHhc-CCCEEEeeEccccccccchhh-hcccceeeecccc-ccccHHHHHhhcCCEEEEECC
Confidence 3799999 69999999999887 7888765422221 1111111 1111111111122 23467777766 89 999998
Q ss_pred CCcccHHHHHHHHHcCCeEEEc--cCChHHHHHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTA--SYLSPEMMALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~--Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
-+..-...++.|+++|+++|.- .+..+++.++ ++++++.++..--|.-|+.-|
T Consensus 78 ~P~~~~~n~~~~~~~gv~~ViGTTG~~~~~~~~l---~~~~~i~~l~apNfSiGv~ll 132 (275)
T TIGR02130 78 HPSAVNDNAAFYGKHGIPFVMGTTGGDREALAKL---VADAKHPAVIAPNMAKQIVAF 132 (275)
T ss_pred ChHHHHHHHHHHHHCCCCEEEcCCCCCHHHHHHH---HHhcCCCEEEECcccHHHHHH
Confidence 5555677899999999998874 3565666666 344567666665666676533
No 351
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.017 Score=64.57 Aligned_cols=74 Identities=15% Similarity=0.262 Sum_probs=57.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------CCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------SAD 635 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------~~D 635 (1201)
|.++|-|+|.+|+.+++.|. . +.+|++++|+.++++++.+.+ .++..+.+|++| .+.+.++++ ..|
T Consensus 3 k~~lItGa~gIG~~la~~l~-~-G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-A-GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPVT 78 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCCC
Confidence 45566679999999999995 3 689999999988776665433 246778899998 777776664 479
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999864
No 352
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=96.19 E-value=0.008 Score=68.16 Aligned_cols=58 Identities=19% Similarity=0.419 Sum_probs=43.4
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs~lP 642 (1201)
|||+|+| .|++|+.++++|.++ ++++...+|. .+|+.| .+.+.+++++ .|+||+|..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~-~~~v~~~~r~-----------------~~dl~d--~~~~~~~~~~~~pd~Vin~aa 60 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER-GYEVIATSRS-----------------DLDLTD--PEAVAKLLEAFKPDVVINCAA 60 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT-SEEEEEESTT-----------------CS-TTS--HHHHHHHHHHH--SEEEE---
T ss_pred CEEEEECCCCHHHHHHHHHHhhC-CCEEEEeCch-----------------hcCCCC--HHHHHHHHHHhCCCeEeccce
Confidence 6999999 699999999999874 5677777776 357777 7888888774 899999985
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 61 ~ 61 (286)
T PF04321_consen 61 Y 61 (286)
T ss_dssp -
T ss_pred e
Confidence 4
No 353
>PLN00203 glutamyl-tRNA reductase
Probab=96.18 E-value=0.032 Score=68.71 Aligned_cols=108 Identities=13% Similarity=0.082 Sum_probs=68.6
Q ss_pred cCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccc
Q psy12817 193 IGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 193 i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s 272 (1201)
+...+|+|+|+|..|..++..+...|+. .+.|++....+.+.+....++. . ..+ ..+.+
T Consensus 264 l~~kkVlVIGAG~mG~~~a~~L~~~G~~---------------~V~V~nRs~era~~La~~~~g~-~-i~~----~~~~d 322 (519)
T PLN00203 264 HASARVLVIGAGKMGKLLVKHLVSKGCT---------------KMVVVNRSEERVAALREEFPDV-E-IIY----KPLDE 322 (519)
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHhCCCC---------------eEEEEeCCHHHHHHHHHHhCCC-c-eEe----ecHhh
Confidence 6678999999999999999988877742 4677776666666555543321 0 000 01111
Q ss_pred hhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccC
Q psy12817 273 LFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISAD 338 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D 338 (1201)
..+.+..+|+||+|. +..+.+|+.++++.+ +++.. ..| |-.+|+|||..
T Consensus 323 --l~~al~~aDVVIsAT---~s~~pvI~~e~l~~~-~~~~~-----~~~------~~~~~IDLAvP 371 (519)
T PLN00203 323 --MLACAAEADVVFTST---SSETPLFLKEHVEAL-PPASD-----TVG------GKRLFVDISVP 371 (519)
T ss_pred --HHHHHhcCCEEEEcc---CCCCCeeCHHHHHHh-hhccc-----ccC------CCeEEEEeCCC
Confidence 124567899999986 223348899999994 33200 001 22789999974
No 354
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.018 Score=63.80 Aligned_cols=77 Identities=13% Similarity=0.150 Sum_probs=58.6
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
..+.++++|.| +|.+|+.+++.|++. +.+|++.+|+. +..+. .... ....+.+|++| .+.+.+.+.+.|++|+
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~-G~~Vi~~~r~~~~~~~~-~~~~-~~~~~~~D~~~--~~~~~~~~~~iDilVn 85 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAK-GAKVIGLTHSKINNSES-NDES-PNEWIKWECGK--EESLDKQLASLDVLIL 85 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEECCchhhhhh-hccC-CCeEEEeeCCC--HHHHHHhcCCCCEEEE
Confidence 34568999999 699999999999886 47888889886 33222 1111 23567899998 7888888889999999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9853
No 355
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.023 Score=62.97 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=59.8
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
|+|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++++.+.... .++..+.+|+.| .+.+.++++ .
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~ 77 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE-GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD--YSQLTALAQACEEKWGG 77 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 4799999 699999999999986 578999999988877655432 346778899998 777776654 5
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 78 id~lI~~ag~ 87 (270)
T PRK05650 78 IDVIVNNAGV 87 (270)
T ss_pred CCEEEECCCC
Confidence 8999999753
No 356
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=96.16 E-value=0.013 Score=67.48 Aligned_cols=76 Identities=18% Similarity=0.346 Sum_probs=54.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH--HHHHHHH--cCCeeEEEeecCCCCchHHHhhccC--CcEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED--IDKVTNE--FGRVEATLIDVNNGGSDNLSGLVRS--ADLV 637 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek--Ae~La~~--~~~v~~v~lDV~D~~~e~L~elI~~--~DVV 637 (1201)
|++|+|.| +|++|+.+++.|.+++...+++.++.... ...+... ..++..+.+|+.| .+.+.+++++ +|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD--RAELARVFTEHQPDCV 78 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcC--hHHHHHHHhhcCCCEE
Confidence 68999999 79999999999998753335556654321 1222211 1246778899998 7889988885 8999
Q ss_pred EEcCC
Q psy12817 638 VSLLP 642 (1201)
Q Consensus 638 Is~lP 642 (1201)
|+|..
T Consensus 79 ih~A~ 83 (355)
T PRK10217 79 MHLAA 83 (355)
T ss_pred EECCc
Confidence 99974
No 357
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.16 E-value=0.027 Score=63.88 Aligned_cols=75 Identities=13% Similarity=0.208 Sum_probs=52.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc--------C-C-eeE-------EEeecCCCCchHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF--------G-R-VEA-------TLIDVNNGGSDNL 627 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~--------~-~-v~~-------v~lDV~D~~~e~L 627 (1201)
.+||.|||+|.||..++..|++. +++|++.|++++++++..+.. + + +.. ..+.+.+ .+
T Consensus 4 ~~kI~vIGaG~mG~~iA~~la~~-G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~----~~ 78 (292)
T PRK07530 4 IKKVGVIGAGQMGNGIAHVCALA-GYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTAT----DL 78 (292)
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeC----CH
Confidence 47899999999999999999986 579999999998876643211 0 1 000 0011222 23
Q ss_pred HhhccCCcEEEEcCCCcc
Q psy12817 628 SGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 628 ~elI~~~DVVIs~lP~~~ 645 (1201)
+ .++++|+||.|+|...
T Consensus 79 ~-~~~~aD~Vieavpe~~ 95 (292)
T PRK07530 79 E-DLADCDLVIEAATEDE 95 (292)
T ss_pred H-HhcCCCEEEEcCcCCH
Confidence 3 3679999999999753
No 358
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.014 Score=63.48 Aligned_cols=66 Identities=14% Similarity=0.264 Sum_probs=51.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHc-CCeeEEEeecCCCCchHHHhhccC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-EDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVRS 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~~ 633 (1201)
||+|+|+| +|.+|+.+++.|+++ +.+|++.+|+. +.++.+.+.. .++..+.+|++| .+++.+++++
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~ 69 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEK-GTHVISISRTENKELTKLAEQYNSNLTFHSLDLQD--VHELETNFNE 69 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhc-CCEEEEEeCCchHHHHHHHhccCCceEEEEecCCC--HHHHHHHHHH
Confidence 67899999 799999999999987 57899999987 5555555433 357788999998 7777776654
No 359
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.15 E-value=0.023 Score=62.71 Aligned_cols=77 Identities=16% Similarity=0.235 Sum_probs=61.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++++|.| +|.+|+.+++.|+++ +.+|++.+|+.++++++.+.+ .++..+.+|++| .+++.+++.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKA-GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 458899999 689999999999986 578989999998877665543 246778999998 777776664
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 86 ~~id~li~~ag~ 97 (265)
T PRK07097 86 GVIDILVNNAGI 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 37999999854
No 360
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.024 Score=63.22 Aligned_cols=77 Identities=19% Similarity=0.301 Sum_probs=60.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+++.++|.| +|.+|+.+++.|+++ +.+|++.+|+.++++++.... .++..+.+|++| .+.+.++++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 84 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAA-GFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD--PDSVKSFVAQAEEA 84 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHh
Confidence 3467899999 699999999999986 578989999888776655432 246677889998 788876665
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 85 ~~~id~vi~~Ag 96 (274)
T PRK07775 85 LGEIEVLVSGAG 96 (274)
T ss_pred cCCCCEEEECCC
Confidence 4699999975
No 361
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.13 E-value=0.033 Score=60.67 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=68.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+.++|+|+|.|.+|..-++.|.+. +.+|+|++.+.. ..+.++... +++.+.-+.. ...+.++|+||.++
T Consensus 7 l~gk~vlVvGgG~va~rk~~~Ll~~-ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~~~~-------~~dl~~~~lVi~at 77 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKARLLLKA-GAQLRVIAEELESELTLLAEQG-GITWLARCFD-------ADILEGAFLVIAAT 77 (205)
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC-CCEEEEEcCCCCHHHHHHHHcC-CEEEEeCCCC-------HHHhCCcEEEEECC
Confidence 3468999999999999999999986 578999988754 455665543 5665543332 23457899999998
Q ss_pred CCc-ccHHHHHHHHHcCCeEEE
Q psy12817 642 PYN-LHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 642 P~~-~h~~VakacIeaGkh~VD 662 (1201)
... .+..+.+.|-+.|+.+-+
T Consensus 78 ~d~~ln~~i~~~a~~~~ilvn~ 99 (205)
T TIGR01470 78 DDEELNRRVAHAARARGVPVNV 99 (205)
T ss_pred CCHHHHHHHHHHHHHcCCEEEE
Confidence 765 778888998888887733
No 362
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.13 E-value=0.015 Score=62.27 Aligned_cols=77 Identities=21% Similarity=0.234 Sum_probs=56.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.++++|+|+| +|.+|+.+++.|.++ +++|++..| +.+..+.+.... +++..+.+|+.| .+.+.++++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 80 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARA-GADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD--KAALEAAVAAAVE 80 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC--HHHHHHHHHHHHH
Confidence 3468999999 799999999999886 457666444 444444443322 357788899998 777776664
Q ss_pred ---CCcEEEEcCC
Q psy12817 633 ---SADLVVSLLP 642 (1201)
Q Consensus 633 ---~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 81 ~~~~id~vi~~ag 93 (249)
T PRK12825 81 RFGRIDILVNNAG 93 (249)
T ss_pred HcCCCCEEEECCc
Confidence 4699999985
No 363
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.024 Score=61.81 Aligned_cols=75 Identities=21% Similarity=0.281 Sum_probs=57.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEE-EeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITL-GSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtV-adR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.++|+|.| +|.+|+.+++.|+++ +.+|.+ ..|+.++++++.... ..+..+.+|++| .+.+.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~-G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLAND-GALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS--IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC--HHHHHHHHHHHHHHh
Confidence 47999999 799999999999987 467765 478887766555433 246678899998 777776655
Q ss_pred -------CCcEEEEcCC
Q psy12817 633 -------SADLVVSLLP 642 (1201)
Q Consensus 633 -------~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 83 ~~~~~~~~id~vi~~ag 99 (254)
T PRK12746 83 QIRVGTSEIDILVNNAG 99 (254)
T ss_pred ccccCCCCccEEEECCC
Confidence 4799999974
No 364
>PRK09242 tropinone reductase; Provisional
Probab=96.12 E-value=0.021 Score=62.50 Aligned_cols=77 Identities=9% Similarity=0.163 Sum_probs=60.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
..|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+++ + ++..+.+|+.+ .+++.+++.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGL-GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 458999999 699999999999986 578999999998887766543 1 35677889998 666655543
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 47999999864
No 365
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.12 E-value=0.024 Score=64.39 Aligned_cols=40 Identities=13% Similarity=0.295 Sum_probs=35.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKV 605 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~L 605 (1201)
.+||.|||+|.||..++..|+.. +++|++.|++.+.+++.
T Consensus 3 i~~I~ViGaG~mG~~iA~~la~~-G~~V~l~d~~~~~l~~~ 42 (291)
T PRK06035 3 IKVIGVVGSGVMGQGIAQVFART-GYDVTIVDVSEEILKNA 42 (291)
T ss_pred CcEEEEECccHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHH
Confidence 47899999999999999999886 57999999999887653
No 366
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.019 Score=63.77 Aligned_cols=74 Identities=11% Similarity=0.144 Sum_probs=57.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
++.++|.| +|.+|+.+++.|+++ +++|++++|+.++++.+.... .++..+.+|++| .+.+++ ++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKK-GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 46789999 699999999999987 688999999988776664431 246778899998 777654 32
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 79 ~~~id~vv~~ag 90 (280)
T PRK06914 79 IGRIDLLVNNAG 90 (280)
T ss_pred cCCeeEEEECCc
Confidence 4699999975
No 367
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.11 E-value=0.026 Score=61.94 Aligned_cols=77 Identities=12% Similarity=0.175 Sum_probs=58.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++++|+ ++.+++.+.. .++.++.+|+.| .+.+.++++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 88 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKA-GADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEE 88 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3468999999 699999999999986 5788888887 4443333222 246788999998 777777765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 89 ~g~id~li~~ag~ 101 (258)
T PRK06935 89 FGKIDILVNNAGT 101 (258)
T ss_pred cCCCCEEEECCCC
Confidence 57999999753
No 368
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.10 E-value=0.022 Score=61.83 Aligned_cols=78 Identities=14% Similarity=0.161 Sum_probs=57.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.. ++.+..... .++..+.+|+++ .+++.++++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEA-GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSD--IEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 3468999999 599999999999986 578988898752 222222222 246788999998 777765543
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 80 ~~d~li~~ag~ 90 (248)
T TIGR01832 80 HIDILVNNAGI 90 (248)
T ss_pred CCCEEEECCCC
Confidence 48999999753
No 369
>PRK06545 prephenate dehydrogenase; Validated
Probab=96.10 E-value=0.03 Score=65.70 Aligned_cols=94 Identities=14% Similarity=0.157 Sum_probs=59.8
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
++|+|||+|.||..++..|.+.+ +++.+.+++.++.+..... +.... -+. ...+.++++++|+||.|+|...
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~G-~~v~i~~~~~~~~~~~~a~--~~~~~-~~~----~~~~~~~~~~aDlVilavP~~~ 72 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAAG-PDVFIIGYDPSAAQLARAL--GFGVI-DEL----AADLQRAAAEADLIVLAVPVDA 72 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHh--cCCCC-ccc----ccCHHHHhcCCCEEEEeCCHHH
Confidence 47999999999999999998764 5777777776654432221 11110 011 2346677889999999999765
Q ss_pred cHHHHHHHH----HcCCeEEEccCCh
Q psy12817 646 HHHVAEFCI----QHGKNLVTASYLS 667 (1201)
Q Consensus 646 h~~VakacI----eaGkh~VD~Syvs 667 (1201)
...+.+... +.++-+.|.+-+.
T Consensus 73 ~~~vl~~l~~~~l~~~~ivtDv~SvK 98 (359)
T PRK06545 73 TAALLAELADLELKPGVIVTDVGSVK 98 (359)
T ss_pred HHHHHHHHhhcCCCCCcEEEeCcccc
Confidence 444444322 3345555655443
No 370
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=96.09 E-value=0.062 Score=64.88 Aligned_cols=144 Identities=17% Similarity=0.215 Sum_probs=94.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCC----------HHHHHHHHH----------Hc----CCeeEEE
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLL----------KEDIDKVTN----------EF----GRVEATL 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~----------~ekAe~La~----------~~----~~v~~v~ 616 (1201)
+.+.++|+|=|.|.||+.+++.|.+.+ .+ |+|.|.+ .+++..+.+ .+ ++++++
T Consensus 234 ~l~Gk~VaVqG~GnVg~~aa~~L~e~G-akVVavSD~~G~iy~~~Gld~~~l~~l~~~k~~~~g~i~~~~~~~~~a~~~- 311 (454)
T PTZ00079 234 SLEGKTVVVSGSGNVAQYAVEKLLQLG-AKVLTMSDSDGYIHEPNGFTKEKLAYLMDLKNVKRGRLKEYAKHSSTAKYV- 311 (454)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEEcCCCcEECCCCCCHHHHHHHHHHHhhcCCcHHhhhhccCCcEEe-
Confidence 456799999999999999999999874 55 5588877 666533321 11 122221
Q ss_pred eecCCCCchHHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEeccccCc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNEVGLDP 692 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e~GlDP 692 (1201)
.. +.+-. -+||+.+=|. ....+..-++..++.|+.+|... ..+++ -++..+++||.+++
T Consensus 312 ---~~---~~~~~--~~cDI~iPcA~~n~I~~~~a~~l~~~~ak~V~EgAN~p~t~e---A~~~L~~~GI~~~P------ 374 (454)
T PTZ00079 312 ---PG---KKPWE--VPCDIAFPCATQNEINLEDAKLLIKNGCKLVAEGANMPTTIE---ATHLFKKNGVIFCP------ 374 (454)
T ss_pred ---CC---cCccc--CCccEEEeccccccCCHHHHHHHHHcCCeEEEecCCCCCCHH---HHHHHHHCCcEEEC------
Confidence 11 12222 2799999886 67788899998889999999985 34443 33446789999987
Q ss_pred hhHHHHHHHHHHHhhhcCCcEEEEEeecCCCCCCCCCCCccccccccChHHHHH
Q psy12817 693 GIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLL 746 (1201)
Q Consensus 693 GIdhmlA~~~idei~~~ggkV~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~ 746 (1201)
|-+-..||-+.|..-|... .- .++|+.+.|-.
T Consensus 375 -----------D~~aNAGGV~vS~~E~~Qn---------~~--~~~W~~eeV~~ 406 (454)
T PTZ00079 375 -----------GKAANAGGVAISGLEMSQN---------AA--RLQWTAEEVDE 406 (454)
T ss_pred -----------hhhhcCCCeeeehHHhhhh---------hc--ccCCCHHHHHH
Confidence 2334456666654444432 22 37898876543
No 371
>PRK09135 pteridine reductase; Provisional
Probab=96.08 E-value=0.019 Score=61.88 Aligned_cols=75 Identities=21% Similarity=0.311 Sum_probs=57.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.++|+|.| +|++|+.+++.|++. +.+|++++|+ .++.+.+...+ ..+..+..|++| .+.+.++++
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 82 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAA-GYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD--PDALPELVAACVAA 82 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 47899999 699999999999986 5788888885 44444444322 146778899998 777777665
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 83 ~~~~d~vi~~ag 94 (249)
T PRK09135 83 FGRLDALVNNAS 94 (249)
T ss_pred cCCCCEEEECCC
Confidence 4699999975
No 372
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.026 Score=61.28 Aligned_cols=76 Identities=20% Similarity=0.275 Sum_probs=56.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.++|+|.| +|++|+.+++.|++. +.+|++.+|+.+ +.+.+...+ .++..+.+|++| .+.+.++++
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~-G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREEF 82 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 47899999 699999999999986 578888888753 344443322 246778899998 777776654
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 83 ~~~d~vi~~ag~ 94 (248)
T PRK07806 83 GGLDALVLNASG 94 (248)
T ss_pred CCCcEEEECCCC
Confidence 57999988753
No 373
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.08 E-value=0.029 Score=67.16 Aligned_cols=78 Identities=17% Similarity=0.210 Sum_probs=61.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++|+|+|.| +|.+|+.+++.|++. +.+|++++|+.++++...... .++..+..|+.| .+.+.+.+.+.|++|++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~-G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd--~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQ-GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ--EAALAELLEKVDILIIN 252 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC--HHHHHHHhCCCCEEEEC
Confidence 3468999999 699999999999886 578998999887665433221 235678899998 88888888999999998
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 253 AGi 255 (406)
T PRK07424 253 HGI 255 (406)
T ss_pred CCc
Confidence 753
No 374
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.031 Score=60.96 Aligned_cols=78 Identities=15% Similarity=0.280 Sum_probs=61.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|..+++.|.+. +.+|.+++|+.++++++.+.. .++..+.+|+.| .+.++++++
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 82 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQ-GAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRER 82 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3457899999 799999999999987 468999999988877766543 235678899988 677665554
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 83 ~~~id~li~~ag~ 95 (252)
T PRK07035 83 HGRLDILVNNAAA 95 (252)
T ss_pred cCCCCEEEECCCc
Confidence 47999999753
No 375
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.07 E-value=0.024 Score=61.55 Aligned_cols=75 Identities=15% Similarity=0.177 Sum_probs=56.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
|++|+|.| +|.+|..+++.|++. +.+|.+. .|+.++++.+.... .++..+.+|+.| .+++.++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAAR-GWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN--EADVIAMFDAVQSAF 78 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCC--HHHHHHHHHHHHHhc
Confidence 67999999 699999999999987 4676654 57777665554332 257788999998 666665543
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 79 ~~id~li~~ag 89 (248)
T PRK06947 79 GRLDALVNNAG 89 (248)
T ss_pred CCCCEEEECCc
Confidence 5799999985
No 376
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.07 E-value=0.022 Score=63.66 Aligned_cols=73 Identities=23% Similarity=0.400 Sum_probs=59.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCC-cEEEEcCCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSA-DLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~-DVVIs~lP~ 643 (1201)
++|+|.| +|++|+.+++.|.+. +++|.+.+|......... .++..+..|+.| .+...+.++.+ |+||.+...
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~---~~~~~~~~d~~~--~~~~~~~~~~~~d~vih~aa~ 74 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAA-GHDVRGLDRLRDGLDPLL---SGVEFVVLDLTD--RDLVDELAKGVPDAVIHLAAQ 74 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhC-CCeEEEEeCCCccccccc---cccceeeecccc--hHHHHHHHhcCCCEEEEcccc
Confidence 3599999 699999999999987 789999999877665443 357788888887 66777777788 999999854
Q ss_pred c
Q psy12817 644 N 644 (1201)
Q Consensus 644 ~ 644 (1201)
.
T Consensus 75 ~ 75 (314)
T COG0451 75 S 75 (314)
T ss_pred C
Confidence 3
No 377
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.06 E-value=0.023 Score=65.40 Aligned_cols=82 Identities=13% Similarity=0.225 Sum_probs=56.3
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEE-------EeecCCCCchHHHhhc-cCCcEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEAT-------LIDVNNGGSDNLSGLV-RSADLV 637 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v-------~lDV~D~~~e~L~elI-~~~DVV 637 (1201)
|||.|||+|.+|..++..|.+. +.+|++.+|+.+.++.+.....+.... .+.+. ..+.+.+ .++|+|
T Consensus 1 MkI~IiGaGa~G~ala~~L~~~-g~~V~l~~r~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~~~~~Dli 75 (326)
T PRK14620 1 MKISILGAGSFGTAIAIALSSK-KISVNLWGRNHTTFESINTKRKNLKYLPTCHLPDNISVK----SAIDEVLSDNATCI 75 (326)
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHHcCCCcccCCCCcCCCCeEEe----CCHHHHHhCCCCEE
Confidence 4799999999999999999986 578999999998888776532111100 00111 2344444 478999
Q ss_pred EEcCCCcccHHHHHH
Q psy12817 638 VSLLPYNLHHHVAEF 652 (1201)
Q Consensus 638 Is~lP~~~h~~Vaka 652 (1201)
|.++|......+++.
T Consensus 76 iiavks~~~~~~l~~ 90 (326)
T PRK14620 76 ILAVPTQQLRTICQQ 90 (326)
T ss_pred EEEeCHHHHHHHHHH
Confidence 999997655554443
No 378
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.06 E-value=0.036 Score=66.58 Aligned_cols=129 Identities=16% Similarity=0.213 Sum_probs=80.5
Q ss_pred cCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccc
Q psy12817 193 IGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 193 i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s 272 (1201)
+...+|+|+|+|.+|+.++..+...|+. .+.+++....+...+....|+... .+ .
T Consensus 180 ~~~~~vlViGaG~iG~~~a~~L~~~G~~---------------~V~v~~r~~~ra~~la~~~g~~~~---------~~-~ 234 (423)
T PRK00045 180 LSGKKVLVIGAGEMGELVAKHLAEKGVR---------------KITVANRTLERAEELAEEFGGEAI---------PL-D 234 (423)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHCCCC---------------eEEEEeCCHHHHHHHHHHcCCcEe---------eH-H
Confidence 4568999999999999999999888843 456666665554445444443111 11 1
Q ss_pred hhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCC
Q psy12817 273 LFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTI 352 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTi 352 (1201)
.. .+.+..+|+||+|.. ... .+++.++++..++.. .|+-.+|+|++.- -.+
T Consensus 235 ~~-~~~l~~aDvVI~aT~--s~~-~~i~~~~l~~~~~~~--------------~~~~~vviDla~P-----------rdi 285 (423)
T PRK00045 235 EL-PEALAEADIVISSTG--APH-PIIGKGMVERALKAR--------------RHRPLLLVDLAVP-----------RDI 285 (423)
T ss_pred HH-HHHhccCCEEEECCC--CCC-cEEcHHHHHHHHhhc--------------cCCCeEEEEeCCC-----------CCC
Confidence 11 234668999999963 222 468999998844221 0122899999631 122
Q ss_pred CCCeeeccCCCCccccccccCCeEEEeeCCcCCCch
Q psy12817 353 DTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLP 388 (1201)
Q Consensus 353 d~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP 388 (1201)
|..+ ..-+||..|.+|+|-....
T Consensus 286 d~~v-------------~~l~~v~l~~vDdl~~~~~ 308 (423)
T PRK00045 286 EPEV-------------GELPGVYLYDVDDLQEIVE 308 (423)
T ss_pred cccc-------------cccCCeEEEEHHHHHHHHH
Confidence 2222 2346888899998866554
No 379
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.06 E-value=0.029 Score=67.23 Aligned_cols=91 Identities=20% Similarity=0.316 Sum_probs=66.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHcC--CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-EDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
+.++|+|+|+|.+|..+++.|++. +++|++.|++. +.+++...++. +++....|..+ +...++|+||.+
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~-G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-------~~~~~~d~vv~~ 75 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKL-GAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-------EFLEGVDLVVVS 75 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-------hHhhcCCEEEEC
Confidence 458999999999999999999987 57999999975 33333222221 45555555432 345679999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD 662 (1201)
.......+.+.+|-+.|+.++.
T Consensus 76 ~g~~~~~~~~~~a~~~~i~~~~ 97 (450)
T PRK14106 76 PGVPLDSPPVVQAHKKGIEVIG 97 (450)
T ss_pred CCCCCCCHHHHHHHHCCCcEEe
Confidence 8655666688888888888875
No 380
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=96.06 E-value=0.024 Score=69.64 Aligned_cols=100 Identities=18% Similarity=0.188 Sum_probs=63.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----------CCeeE-------EEeecCCCCchH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----------GRVEA-------TLIDVNNGGSDN 626 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----------~~v~~-------v~lDV~D~~~e~ 626 (1201)
..++|.|||+|.||..++..|+.. +++|++.|++.+.+++..+.. ...+. -.+...+ +
T Consensus 6 ~i~~V~VIGaG~MG~gIA~~la~a-G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~----~ 80 (507)
T PRK08268 6 SIATVAVIGAGAMGAGIAQVAAQA-GHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVE----A 80 (507)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeC----C
Confidence 347899999999999999999876 689999999999887632111 11000 0011111 2
Q ss_pred HHhhccCCcEEEEcCCCcccH--HH---HHHHHHcCCeEE-EccCChHH
Q psy12817 627 LSGLVRSADLVVSLLPYNLHH--HV---AEFCIQHGKNLV-TASYLSPE 669 (1201)
Q Consensus 627 L~elI~~~DVVIs~lP~~~h~--~V---akacIeaGkh~V-D~Syvs~e 669 (1201)
+.+ ++++|+||.|+|..... .+ +......++.+. ++|.++..
T Consensus 81 ~~~-~~~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl~i~ 128 (507)
T PRK08268 81 LAD-LADCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLSIT 128 (507)
T ss_pred HHH-hCCCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 333 56999999999976542 22 222233445553 56776654
No 381
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.05 E-value=0.0084 Score=63.86 Aligned_cols=74 Identities=27% Similarity=0.473 Sum_probs=48.0
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----------CCee-------EEEeecCCCCchHHHh
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----------GRVE-------ATLIDVNNGGSDNLSG 629 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----------~~v~-------~v~lDV~D~~~e~L~e 629 (1201)
||.|+|+|.||+.++..++.. +++|+++|++.+.+++..+.. .... .-.+.+ .+++++
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~-G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~----~~dl~~ 75 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARA-GYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISF----TTDLEE 75 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHT-TSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEE----ESSGGG
T ss_pred CEEEEcCCHHHHHHHHHHHhC-CCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhccc----ccCHHH
Confidence 799999999999999999987 799999999998765433221 0000 000111 124666
Q ss_pred hccCCcEEEEcCCCccc
Q psy12817 630 LVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 630 lI~~~DVVIs~lP~~~h 646 (1201)
+. ++|+||.|+|-.+.
T Consensus 76 ~~-~adlViEai~E~l~ 91 (180)
T PF02737_consen 76 AV-DADLVIEAIPEDLE 91 (180)
T ss_dssp GC-TESEEEE-S-SSHH
T ss_pred Hh-hhheehhhccccHH
Confidence 66 99999999986553
No 382
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=96.05 E-value=0.028 Score=63.88 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=35.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDK 604 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~ 604 (1201)
.++||.|||+|.||..++..|+.. +++|++.|++.+++++
T Consensus 3 ~~~~V~vIG~G~mG~~iA~~l~~~-G~~V~~~d~~~~~~~~ 42 (295)
T PLN02545 3 EIKKVGVVGAGQMGSGIAQLAAAA-GMDVWLLDSDPAALSR 42 (295)
T ss_pred CcCEEEEECCCHHHHHHHHHHHhc-CCeEEEEeCCHHHHHH
Confidence 357899999999999999999976 5899999999987754
No 383
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.04 E-value=0.02 Score=62.79 Aligned_cols=76 Identities=14% Similarity=0.298 Sum_probs=60.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
++++|+|.| +|.+|+.+++.|++. +.+|++++|+.+..+.+.... .++..+.+|++| .+++.++++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~-G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 468999999 799999999999986 578889999988877665443 245678899998 777766554
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 87 ~~~d~li~~ag 97 (255)
T PRK06113 87 GKVDILVNNAG 97 (255)
T ss_pred CCCCEEEECCC
Confidence 4699999975
No 384
>PRK12742 oxidoreductase; Provisional
Probab=96.04 E-value=0.024 Score=60.97 Aligned_cols=76 Identities=18% Similarity=0.305 Sum_probs=58.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC---CcEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS---ADLVV 638 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~---~DVVI 638 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++..+ +.++++++.... ++..+.+|++| .+.+.+++++ .|+||
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~-~~~~~~~D~~~--~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTD-GANVRFTYAGSKDAAERLAQET-GATAVQTDSAD--RDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCCHHHHHHHHHHh-CCeEEecCCCC--HHHHHHHHHHhCCCcEEE
Confidence 458999999 699999999999986 467766654 667777776655 46778899988 6777776653 79999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 99753
No 385
>PLN02206 UDP-glucuronate decarboxylase
Probab=96.03 E-value=0.041 Score=66.48 Aligned_cols=71 Identities=20% Similarity=0.253 Sum_probs=48.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHHc--CCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNEF--GRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~~--~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+.|||+|.| +|++|+.+++.|.++ +.+|++.++.... .+.+...+ ++++.+..|+.+ ..+.++|+||+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~-G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~-------~~l~~~D~ViH 189 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMAR-GDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVE-------PILLEVDQIYH 189 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHC-cCEEEEEeCCCccchhhhhhhccCCceEEEECCccC-------hhhcCCCEEEE
Confidence 458999999 799999999999987 5788888765321 12221111 345666666654 23457999999
Q ss_pred cCC
Q psy12817 640 LLP 642 (1201)
Q Consensus 640 ~lP 642 (1201)
|..
T Consensus 190 lAa 192 (442)
T PLN02206 190 LAC 192 (442)
T ss_pred eee
Confidence 984
No 386
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.01 E-value=0.0076 Score=69.15 Aligned_cols=72 Identities=21% Similarity=0.234 Sum_probs=52.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCCee-----EEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGRVE-----ATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~v~-----~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+||+|||+|.+|+.++..|+..+-. +|+++|++.++++.++..+.... ...+-..+ .+ .++++|+||+
T Consensus 1 ~kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~-----~~-~l~~aDIVIi 74 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGD-----YS-DCKDADIVVI 74 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCC-----HH-HhCCCCEEEE
Confidence 4899999999999999999887543 79999999999888776541111 01111122 22 3579999999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+++.
T Consensus 75 tag~ 78 (306)
T cd05291 75 TAGA 78 (306)
T ss_pred ccCC
Confidence 9954
No 387
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.01 E-value=0.019 Score=67.27 Aligned_cols=91 Identities=16% Similarity=0.277 Sum_probs=62.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCe---EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIH---ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~---VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.+||.|+| +|++|+.+++.|.++++++ +.++......-+.+ .+.+-.....+. | ++ + ++++|+|+.|
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~--~~~~~~l~v~~~-~--~~---~-~~~~Divf~a 75 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV--QFKGREIIIQEA-K--IN---S-FEGVDIAFFS 75 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe--eeCCcceEEEeC-C--HH---H-hcCCCEEEEC
Confidence 47999999 6999999999999877777 44433322222222 121212111122 2 22 2 3689999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|.....+++..+.++|+.+||.|
T Consensus 76 ~~~~~s~~~~~~~~~~G~~VID~S 99 (347)
T PRK06728 76 AGGEVSRQFVNQAVSSGAIVIDNT 99 (347)
T ss_pred CChHHHHHHHHHHHHCCCEEEECc
Confidence 999988999999999999999986
No 388
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.019 Score=62.87 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=56.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC-------Cc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS-------AD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~-------~D 635 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|++.+|+.++. ....++..+.+|+.| .+++.+++++ .|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~-g~~v~~~~r~~~~~----~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 77 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAA-GATVVVCGRRAPET----VDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLD 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCChhhh----hcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 458999999 699999999999986 57899999987651 111257788999998 7777776653 59
Q ss_pred EEEEcCC
Q psy12817 636 LVVSLLP 642 (1201)
Q Consensus 636 VVIs~lP 642 (1201)
+||++..
T Consensus 78 ~vi~~ag 84 (252)
T PRK07856 78 VLVNNAG 84 (252)
T ss_pred EEEECCC
Confidence 9999975
No 389
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.00 E-value=0.023 Score=61.78 Aligned_cols=75 Identities=21% Similarity=0.348 Sum_probs=59.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
|+++|.| +|.+|..+++.|++. +.+|++.+|+.++++++.... .++..+.+|++| .+.+.++++ .
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD-GFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCC
Confidence 5789999 799999999999986 578999999987776655432 246778899998 777776654 4
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++.+.
T Consensus 78 id~vi~~ag~ 87 (254)
T TIGR02415 78 FDVMVNNAGV 87 (254)
T ss_pred CCEEEECCCc
Confidence 6999999864
No 390
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=95.99 E-value=0.035 Score=66.99 Aligned_cols=71 Identities=17% Similarity=0.192 Sum_probs=48.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHH--cCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNE--FGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~--~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+.|||+|.| +|++|+.+++.|.++ +++|++.+|.... .+.+... .++++.+..|+.+ ..+.++|+||+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~-G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~-------~~~~~~D~ViH 190 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGR-GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVE-------PILLEVDQIYH 190 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCCccHhHhhhhccCCceEEEECcccc-------ccccCCCEEEE
Confidence 357999999 799999999999987 5789988875321 1111111 1345666556554 23568999999
Q ss_pred cCC
Q psy12817 640 LLP 642 (1201)
Q Consensus 640 ~lP 642 (1201)
|..
T Consensus 191 lAa 193 (436)
T PLN02166 191 LAC 193 (436)
T ss_pred Cce
Confidence 983
No 391
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.99 E-value=0.026 Score=60.97 Aligned_cols=77 Identities=16% Similarity=0.295 Sum_probs=59.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++++|.| +|.+|+.+++.|.++ +.+|++++|+.++.+.+.+.. .++..+.+|+.| .+.+.++++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQK-GAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD--EEDVEATFAQIAEDF 80 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 357899999 599999999999887 468999999988776655433 246678899988 667665554
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 81 ~~id~vi~~ag~ 92 (253)
T PRK08217 81 GQLNGLINNAGI 92 (253)
T ss_pred CCCCEEEECCCc
Confidence 36999998753
No 392
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.99 E-value=0.015 Score=66.77 Aligned_cols=77 Identities=17% Similarity=0.201 Sum_probs=58.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-----HHHHHHHH----cCCeeEEEeecCCCCchHHHhhcc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-----DIDKVTNE----FGRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-----kAe~La~~----~~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
.++++|+|.| +|++|+.+++.|.+. +++|++.+|+.+ +++.+... -.++..+..|+.| .+.+.++++
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~ 80 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSK-GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSD--ASSLRRWLD 80 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEEecccccccccchhhhccccccccCceEEEEecCCC--HHHHHHHHH
Confidence 4568999999 699999999999987 578888887643 23333211 1246788899998 788888887
Q ss_pred C--CcEEEEcCC
Q psy12817 633 S--ADLVVSLLP 642 (1201)
Q Consensus 633 ~--~DVVIs~lP 642 (1201)
+ .|+||+|..
T Consensus 81 ~~~~d~Vih~A~ 92 (340)
T PLN02653 81 DIKPDEVYNLAA 92 (340)
T ss_pred HcCCCEEEECCc
Confidence 5 599999975
No 393
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.98 E-value=0.022 Score=66.38 Aligned_cols=67 Identities=15% Similarity=0.186 Sum_probs=51.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||+|.||+.+++.|... +.+|.+.||+.+..... .. . ...+.++++++|+|+.++|
T Consensus 144 l~g~~VgIIG~G~IG~~vA~~L~~~-G~~V~~~d~~~~~~~~~------~~-----~----~~~l~ell~~aDiVil~lP 207 (330)
T PRK12480 144 VKNMTVAIIGTGRIGAATAKIYAGF-GATITAYDAYPNKDLDF------LT-----Y----KDSVKEAIKDADIISLHVP 207 (330)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCChhHhhhh------hh-----c----cCCHHHHHhcCCEEEEeCC
Confidence 3457999999999999999999875 57999999987643211 11 1 1257888999999999999
Q ss_pred Ccc
Q psy12817 643 YNL 645 (1201)
Q Consensus 643 ~~~ 645 (1201)
..-
T Consensus 208 ~t~ 210 (330)
T PRK12480 208 ANK 210 (330)
T ss_pred CcH
Confidence 653
No 394
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.029 Score=61.38 Aligned_cols=76 Identities=16% Similarity=0.118 Sum_probs=59.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH----cCCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE----FGRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~----~~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++++|.| +|.+|+.+++.|++. +.+|++.+|+.++. ++.+. ..++.++.+|+++ .+.+.++++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 80 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEE-GAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAK 80 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHc-CCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence 3457999999 699999999999987 46788889988765 33222 2357789999998 777877665
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 81 ~~~id~vi~~ag 92 (258)
T PRK08628 81 FGRIDGLVNNAG 92 (258)
T ss_pred cCCCCEEEECCc
Confidence 4799999985
No 395
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.96 E-value=0.025 Score=61.11 Aligned_cols=74 Identities=7% Similarity=0.045 Sum_probs=56.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~DV 636 (1201)
+|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++..+..... ++.++.+|+.| .+++.++++ ..|+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 77 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQ-GQPVIVSYRTHYPAIDGLRQA-GAQCIQADFST--NAGIMAFIDELKQHTDGLRA 77 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHc-CCEEEEcCCCC--HHHHHHHHHHHHhhCCCccE
Confidence 46899999 689999999999986 578999999876543322232 46788899998 677665543 3799
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
+|++..
T Consensus 78 lv~~ag 83 (236)
T PRK06483 78 IIHNAS 83 (236)
T ss_pred EEECCc
Confidence 999975
No 396
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=95.95 E-value=0.033 Score=63.04 Aligned_cols=80 Identities=13% Similarity=0.057 Sum_probs=54.0
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEE------eecCCCCchHHHhhccCCcEEEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATL------IDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~------lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
|||+|+|+|.+|..++..|++. +.+|++++| .++.+.+.+. +..... ....- ..+..+..+.+|+||.
T Consensus 1 mkI~IiG~G~iG~~~a~~L~~~-g~~V~~~~r-~~~~~~~~~~--g~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~vil 74 (305)
T PRK12921 1 MRIAVVGAGAVGGTFGGRLLEA-GRDVTFLVR-PKRAKALRER--GLVIRSDHGDAVVPGPV--ITDPEELTGPFDLVIL 74 (305)
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCceEEEec-HHHHHHHHhC--CeEEEeCCCeEEeccee--ecCHHHccCCCCEEEE
Confidence 5899999999999999999986 578999999 7777776542 222111 00000 1123444578999999
Q ss_pred cCCCcccHHHHH
Q psy12817 640 LLPYNLHHHVAE 651 (1201)
Q Consensus 640 ~lP~~~h~~Vak 651 (1201)
|+|......+++
T Consensus 75 avk~~~~~~~~~ 86 (305)
T PRK12921 75 AVKAYQLDAAIP 86 (305)
T ss_pred EecccCHHHHHH
Confidence 998765444443
No 397
>PTZ00117 malate dehydrogenase; Provisional
Probab=95.92 E-value=0.083 Score=61.28 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=49.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeE-----EEeecCCCCchHHHhhccCCcEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEA-----TLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~-----v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
+.+||.|+|+|.||..++..++..+-.++.+.|++.++++..+........ ..+-.+ .+++ .++++|+||
T Consensus 4 ~~~KI~IIGaG~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~----~d~~-~l~~ADiVV 78 (319)
T PTZ00117 4 KRKKISMIGAGQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGT----NNYE-DIKDSDVVV 78 (319)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeC----CCHH-HhCCCCEEE
Confidence 467999999999999999988876535799999988765433322211110 111111 2355 568999999
Q ss_pred EcC
Q psy12817 639 SLL 641 (1201)
Q Consensus 639 s~l 641 (1201)
.+.
T Consensus 79 ita 81 (319)
T PTZ00117 79 ITA 81 (319)
T ss_pred ECC
Confidence 998
No 398
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=95.92 E-value=0.038 Score=63.41 Aligned_cols=110 Identities=13% Similarity=0.090 Sum_probs=77.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC--HHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL--KEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVV 638 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~--~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVI 638 (1201)
++.||+|.| .|.+|+.+.+.|.+.+.-.+.-+++. .++ ..+++. ...+.++-.. .|++|
T Consensus 7 ~~~~~~v~~~~~~~g~~~l~~l~~~g~~~v~pVnp~~~~~~-------v~G~~~---------y~sv~dlp~~~~~DlAv 70 (291)
T PRK05678 7 KDTKVIVQGITGKQGTFHTEQMLAYGTNIVGGVTPGKGGTT-------VLGLPV---------FNTVAEAVEATGANASV 70 (291)
T ss_pred CCCeEEEeCCCchHHHHHHHHHHHCCCCEEEEECCCCCCCe-------EeCeec---------cCCHHHHhhccCCCEEE
Confidence 357999999 79999999999987643344455554 221 112322 2245555555 89999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEc--c-CChHHHHHHHHHHHHcCCEEE--eccc
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTA--S-YLSPEMMALHERAASAGITVL--NEVG 689 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~--S-yvs~e~~eLde~AkeAGVtil--~e~G 689 (1201)
.++|...-+++++.|.+.|+..+-+ + +-.++.++|.+.|++.|+.++ |.+|
T Consensus 71 i~vp~~~v~~~l~e~~~~gvk~avI~s~Gf~~~~~~~l~~~a~~~girvlGPNc~G 126 (291)
T PRK05678 71 IYVPPPFAADAILEAIDAGIDLIVCITEGIPVLDMLEVKAYLERKKTRLIGPNCPG 126 (291)
T ss_pred EEcCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEECCCCCc
Confidence 9999998899999999999875332 2 433345689899999999998 4455
No 399
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.91 E-value=0.028 Score=61.05 Aligned_cols=75 Identities=16% Similarity=0.300 Sum_probs=58.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhccC--------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVRS-------- 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~~-------- 633 (1201)
.++|+|.| +|.+|+.+++.|++. +.+|.+. .|+.++++.+....+ ++..+.+|+.| .+.+.+++++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFARE-GARVVVNYHQSEDAAEALADELGDRAIALQADVTD--REQVQAMFATATEHFGKP 81 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHHhCCC
Confidence 47899999 799999999999886 4677664 556777777666543 46778899998 7777776653
Q ss_pred CcEEEEcCC
Q psy12817 634 ADLVVSLLP 642 (1201)
Q Consensus 634 ~DVVIs~lP 642 (1201)
.|+||++..
T Consensus 82 id~li~~ag 90 (253)
T PRK08642 82 ITTVVNNAL 90 (253)
T ss_pred CeEEEECCC
Confidence 899999874
No 400
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=95.90 E-value=0.033 Score=65.80 Aligned_cols=119 Identities=12% Similarity=0.135 Sum_probs=83.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-C----C--------eeEEEeecCCCCchHHHhhcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-G----R--------VEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~----~--------v~~v~lDV~D~~~e~L~elI~ 632 (1201)
|||.|+|+|+||...+-.|++. +++|+.+|.++++.+.+.+.. | + ...-.+..+ .+.++.++
T Consensus 1 MkI~viGtGYVGLv~g~~lA~~-GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fT----td~~~a~~ 75 (414)
T COG1004 1 MKITVIGTGYVGLVTGACLAEL-GHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFT----TDYEEAVK 75 (414)
T ss_pred CceEEECCchHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEE----cCHHHHHh
Confidence 7999999999999999999987 478999999999999887643 1 1 111112233 25677888
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 633 SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 633 ~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
++|+++.|+|.... .....|++|+...++++.+.-++. .++++-.-+-||...-+-.
T Consensus 76 ~adv~fIavgTP~~----------~dg~aDl~~V~ava~~i~~~~~~~-~vvV~KSTVPvGt~~~v~~ 132 (414)
T COG1004 76 DADVVFIAVGTPPD----------EDGSADLSYVEAVAKDIGEILDGK-AVVVIKSTVPVGTTEEVRA 132 (414)
T ss_pred cCCEEEEEcCCCCC----------CCCCccHHHHHHHHHHHHhhcCCC-eEEEEcCCCCCCchHHHHH
Confidence 99999999976542 135678888777777765544333 5666667777776654433
No 401
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.90 E-value=0.021 Score=66.83 Aligned_cols=92 Identities=14% Similarity=0.178 Sum_probs=61.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..+||+|+| +|++|+.+++.|.+ .+..++.........-+.+.. .+......++ + . +.++++|+|+.|
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~--~~~~~~v~~~-~--~----~~~~~~D~vf~a 76 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF--EGRDYTVEEL-T--E----DSFDGVDIALFS 76 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee--cCceeEEEeC-C--H----HHHcCCCEEEEC
Confidence 357999999 79999999999987 555665433222111111111 1222222222 1 1 223689999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|.....+++..+.++|+.+||.|
T Consensus 77 ~p~~~s~~~~~~~~~~g~~VIDlS 100 (344)
T PLN02383 77 AGGSISKKFGPIAVDKGAVVVDNS 100 (344)
T ss_pred CCcHHHHHHHHHHHhCCCEEEECC
Confidence 999888889998899999999997
No 402
>PRK08324 short chain dehydrogenase; Validated
Probab=95.90 E-value=0.057 Score=68.53 Aligned_cols=77 Identities=22% Similarity=0.322 Sum_probs=63.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhcc-------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
..++|+|.| +|.+|+.+++.|.+. +.+|++++|+.++++.+...+. ++..+.+|++| .+.+.++++
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~-Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAE-GACVVLADLDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFG 497 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 458999999 699999999999987 5689999999988877766542 57788999998 777776664
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 498 ~iDvvI~~AG~ 508 (681)
T PRK08324 498 GVDIVVSNAGI 508 (681)
T ss_pred CCCEEEECCCC
Confidence 57999999853
No 403
>PLN03139 formate dehydrogenase; Provisional
Probab=95.90 E-value=0.038 Score=65.72 Aligned_cols=70 Identities=26% Similarity=0.332 Sum_probs=51.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.||+.+++.|... +.+|.++||+....+. .... ++.. .++++++++++|+|+.++|
T Consensus 197 L~gktVGIVG~G~IG~~vA~~L~af-G~~V~~~d~~~~~~~~-~~~~-g~~~---------~~~l~ell~~sDvV~l~lP 264 (386)
T PLN03139 197 LEGKTVGTVGAGRIGRLLLQRLKPF-NCNLLYHDRLKMDPEL-EKET-GAKF---------EEDLDAMLPKCDVVVINTP 264 (386)
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHC-CCEEEEECCCCcchhh-Hhhc-Ccee---------cCCHHHHHhhCCEEEEeCC
Confidence 4578999999999999999999875 6789999987533222 1222 2221 2358888999999999999
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 265 lt 266 (386)
T PLN03139 265 LT 266 (386)
T ss_pred CC
Confidence 53
No 404
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.035 Score=60.72 Aligned_cols=76 Identities=11% Similarity=0.144 Sum_probs=58.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.++|+|.| +|.+|+.+++.|.+.+ .+ |++.+|+.++.+.+...+ .++..+.+|+.| .+.+.++++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G-~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERG-AAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEA 81 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 458899999 6999999999999874 55 999999987766544332 235668899998 777776654
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 82 ~g~id~li~~ag 93 (260)
T PRK06198 82 FGRLDALVNAAG 93 (260)
T ss_pred hCCCCEEEECCC
Confidence 4799999975
No 405
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.89 E-value=0.019 Score=67.66 Aligned_cols=92 Identities=18% Similarity=0.236 Sum_probs=63.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCe---EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIH---ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~---VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
|++|+|+| +|++|+.+++.|++++++. +..++.. ...++. -.+.+-.....++.+ .+. ++++|+|+.|
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~-~sg~~~-~~f~g~~~~v~~~~~--~~~----~~~~Divf~a 72 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS-QAGGAA-PSFGGKEGTLQDAFD--IDA----LKKLDIIITC 72 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch-hhCCcc-cccCCCcceEEecCC--hhH----hcCCCEEEEC
Confidence 68999999 6999999999777766775 5554432 222222 122222223334333 222 3689999999
Q ss_pred CCCcccHHHHHHHHHcCCe--EEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKN--LVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh--~VD~S 664 (1201)
+|.....+++..+.++|+. +||.|
T Consensus 73 ~~~~~s~~~~~~~~~aG~~~~VID~S 98 (369)
T PRK06598 73 QGGDYTNEVYPKLRAAGWQGYWIDAA 98 (369)
T ss_pred CCHHHHHHHHHHHHhCCCCeEEEECC
Confidence 9998889999999999965 99986
No 406
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.88 E-value=0.042 Score=60.23 Aligned_cols=76 Identities=14% Similarity=0.176 Sum_probs=56.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.++++++|.| +|++|+.+++.|+++ +.+|++.+|+.. .+++.+.+ .++..+.+|++| .+++.++++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~-G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAE-GARVVLVDRSEL-VHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEA 81 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHH
Confidence 3468999999 699999999999987 578999999853 33333322 246678899998 777666554
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 82 ~~~id~lv~nAg 93 (260)
T PRK12823 82 FGRIDVLINNVG 93 (260)
T ss_pred cCCCeEEEECCc
Confidence 4799999874
No 407
>KOG1209|consensus
Probab=95.88 E-value=0.026 Score=61.61 Aligned_cols=79 Identities=15% Similarity=0.244 Sum_probs=64.3
Q ss_pred CCCeEEEEcC--chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--------C
Q psy12817 564 ESRNVLLLGA--GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--------S 633 (1201)
Q Consensus 564 ~mkKVLILGA--G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--------~ 633 (1201)
+.++|+|.|| |.||.++++.+++. ++.|....|..+....|+.++ ++.+..+|+++ ++++.+... +
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~-G~~V~AtaR~~e~M~~L~~~~-gl~~~kLDV~~--~~~V~~v~~evr~~~~Gk 81 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARN-GYLVYATARRLEPMAQLAIQF-GLKPYKLDVSK--PEEVVTVSGEVRANPDGK 81 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhC-CeEEEEEccccchHhhHHHhh-CCeeEEeccCC--hHHHHHHHHHHhhCCCCc
Confidence 4689999994 99999999999986 689999999999999999777 78999999998 677655432 3
Q ss_pred CcEEEEcCCCccc
Q psy12817 634 ADLVVSLLPYNLH 646 (1201)
Q Consensus 634 ~DVVIs~lP~~~h 646 (1201)
.|+.+|-...+..
T Consensus 82 ld~L~NNAG~~C~ 94 (289)
T KOG1209|consen 82 LDLLYNNAGQSCT 94 (289)
T ss_pred eEEEEcCCCCCcc
Confidence 6888887654443
No 408
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.88 E-value=0.034 Score=63.65 Aligned_cols=77 Identities=13% Similarity=0.187 Sum_probs=60.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC----CeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG----RVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~----~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+++.++|.| ++.+|..+++.|++.+..+|++++|+.+++++++..+. ++..+.+|++| .+.++++++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS--LDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 356889999 68999999999998753789999999988877766542 35677899998 777665543
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 80 ~~iD~lI~nAG 90 (314)
T TIGR01289 80 RPLDALVCNAA 90 (314)
T ss_pred CCCCEEEECCC
Confidence 4799999875
No 409
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.86 E-value=0.031 Score=67.78 Aligned_cols=84 Identities=18% Similarity=0.332 Sum_probs=59.5
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.+|+|+|.|.+|++....++.+| +.|.+++....+...... +| |...
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~G----------------a~ViV~e~dp~~a~~A~~-~G--~~~~---------- 301 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFG----------------ARVVVTEIDPICALQAAM-EG--YQVV---------- 301 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCC----------------CEEEEEeCCchhHHHHHh-cC--ceec----------
Confidence 455689999999999999999999998 445666544333222111 22 2110
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
.+ ++.++.+|+||++. ..+.+|+.++++. ||||
T Consensus 302 -~l-eell~~ADIVI~at----Gt~~iI~~e~~~~-MKpG 334 (476)
T PTZ00075 302 -TL-EDVVETADIFVTAT----GNKDIITLEHMRR-MKNN 334 (476)
T ss_pred -cH-HHHHhcCCEEEECC----CcccccCHHHHhc-cCCC
Confidence 11 24577899999984 4678999999999 9999
No 410
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=95.84 E-value=0.02 Score=65.45 Aligned_cols=96 Identities=18% Similarity=0.175 Sum_probs=61.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHH----HHHHcCCeeEEEeec
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDK----VTNEFGRVEATLIDV 619 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~----La~~~~~v~~v~lDV 619 (1201)
.+..+|+|+|+|.+|..++++|+..+--+|+++|.+. .|++. +.+..|.++. ++
T Consensus 17 L~~s~VLIvG~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V---~~ 93 (286)
T cd01491 17 LQKSNVLISGLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPV---TV 93 (286)
T ss_pred HhcCcEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEE---EE
Confidence 4568999999999999999999988666799888543 23332 2222244432 22
Q ss_pred CCCCchHHHhhccCCcEEEEcCC-CcccHHHHHHHHHcCCeEEEc
Q psy12817 620 NNGGSDNLSGLVRSADLVVSLLP-YNLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 620 ~D~~~e~L~elI~~~DVVIs~lP-~~~h~~VakacIeaGkh~VD~ 663 (1201)
.+ .....+.+++.|+||.|.. ......+-+.|.++++.++..
T Consensus 94 ~~--~~~~~~~l~~fdvVV~~~~~~~~~~~in~~c~~~~ipfI~a 136 (286)
T cd01491 94 ST--GPLTTDELLKFQVVVLTDASLEDQLKINEFCHSPGIKFISA 136 (286)
T ss_pred Ee--ccCCHHHHhcCCEEEEecCCHHHHHHHHHHHHHcCCEEEEE
Confidence 22 1122356678899988863 222344666777777776664
No 411
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.038 Score=60.83 Aligned_cols=77 Identities=19% Similarity=0.359 Sum_probs=59.1
Q ss_pred CCCeEEEEcC-c-hhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH----cC--CeeEEEeecCCCCchHHHhhcc---
Q psy12817 564 ESRNVLLLGA-G-YVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE----FG--RVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 564 ~mkKVLILGA-G-~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~----~~--~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
+.++++|.|+ | .+|+.+++.|++. +.+|++.+|+.++.++..+. ++ ++..+.+|+.+ .+.++++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~ 92 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEE-GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDAAV 92 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHHHH
Confidence 4589999995 7 6999999999986 46899999998776655432 22 46678899998 777776654
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 93 ~~~g~id~li~~ag~ 107 (262)
T PRK07831 93 ERLGRLDVLVNNAGL 107 (262)
T ss_pred HHcCCCCEEEECCCC
Confidence 46999999853
No 412
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.83 E-value=0.057 Score=61.05 Aligned_cols=38 Identities=11% Similarity=0.248 Sum_probs=34.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDID 603 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe 603 (1201)
++||.|||+|.||..++..+++. +++|++.|+++++++
T Consensus 3 ~~kI~VIG~G~mG~~ia~~la~~-g~~V~~~d~~~~~~~ 40 (282)
T PRK05808 3 IQKIGVIGAGTMGNGIAQVCAVA-GYDVVMVDISDAAVD 40 (282)
T ss_pred ccEEEEEccCHHHHHHHHHHHHC-CCceEEEeCCHHHHH
Confidence 57899999999999999999887 578999999998875
No 413
>PLN02928 oxidoreductase family protein
Probab=95.83 E-value=0.023 Score=66.60 Aligned_cols=79 Identities=14% Similarity=0.111 Sum_probs=52.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
...++|+|+|+|.||+.+++.|... +.+|++++|+..+.......++ .+......... ...++++++++|+|+.+
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~af-G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPF-GVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGG--HEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhC-CCEEEEECCCCChhhhhhhccccccccccccccCc--ccCHHHHHhhCCEEEEC
Confidence 4568999999999999999999876 5799999997432211100000 01100000112 45789999999999999
Q ss_pred CCCc
Q psy12817 641 LPYN 644 (1201)
Q Consensus 641 lP~~ 644 (1201)
+|..
T Consensus 234 lPlt 237 (347)
T PLN02928 234 CTLT 237 (347)
T ss_pred CCCC
Confidence 9954
No 414
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=95.83 E-value=0.091 Score=60.88 Aligned_cols=76 Identities=18% Similarity=0.198 Sum_probs=52.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCCeeEE--EeecCCCCchHHHhhccCCcEEEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGRVEAT--LIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~v~~v--~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
...+||.|||+|.||..++..|+..+-. ++.+.|++.++++..+..+..+.+. ...+.. ...+ .++++|+||.
T Consensus 4 ~~~~ki~iiGaG~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~~-~~~~adivIi 79 (315)
T PRK00066 4 KQHNKVVLVGDGAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDYS-DCKDADLVVI 79 (315)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCHH-HhCCCCEEEE
Confidence 3457999999999999999999877544 6999999988877766554222110 112221 1233 3689999999
Q ss_pred cCC
Q psy12817 640 LLP 642 (1201)
Q Consensus 640 ~lP 642 (1201)
+..
T Consensus 80 tag 82 (315)
T PRK00066 80 TAG 82 (315)
T ss_pred ecC
Confidence 874
No 415
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=95.80 E-value=0.026 Score=64.34 Aligned_cols=74 Identities=19% Similarity=0.320 Sum_probs=58.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhC-CCCeEEEEeC-----CHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRD-ENIHITLGSL-----LKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADL 636 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~-~~~~VtVadR-----~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DV 636 (1201)
|++||-| ||+||+..++++.+. ++.+|++.|. +.+.+..+.. -|+..+++.|+.| .+.+.++++ +.|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~-~~~~~fv~~DI~D--~~~v~~~~~~~~~D~ 77 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-SPRYRFVQGDICD--RELVDRLFKEYQPDA 77 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc-CCCceEEeccccC--HHHHHHHHHhcCCCe
Confidence 5899998 999999999999865 5567888875 3444444433 2578999999998 889999998 5899
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
|++...
T Consensus 78 VvhfAA 83 (340)
T COG1088 78 VVHFAA 83 (340)
T ss_pred EEEech
Confidence 999864
No 416
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=95.80 E-value=0.085 Score=62.45 Aligned_cols=121 Identities=15% Similarity=0.228 Sum_probs=80.6
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCC-CCeEE--EEeCCHHHHHHHHHHcCCeeEEEe-ecCC------------------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDE-NIHIT--LGSLLKEDIDKVTNEFGRVEATLI-DVNN------------------ 621 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~-~~~Vt--VadR~~ekAe~La~~~~~v~~v~l-DV~D------------------ 621 (1201)
||||+|+| +|.||....+-+.+.+ .++|+ .+.++.+.+.+.+.+| +.+.+.+ |-.+
T Consensus 1 Mk~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~Laa~~n~~~L~~q~~~f-~p~~v~i~d~~~~~~l~~~l~~~~~~~~v~ 79 (389)
T TIGR00243 1 MKQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAGKNVALMVEQILEF-RPKFVAIDDEASLKDLKTMLQQQGSRTEVL 79 (389)
T ss_pred CceEEEEecChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHc-CCCEEEEcCHHHHHHHHHHhhcCCCCcEEE
Confidence 68999999 7999999999887654 36654 4567888888888777 2222222 1100
Q ss_pred CCchHHHhhcc--CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC--ChHHHHHHHHHHHHcCCEEEe
Q psy12817 622 GGSDNLSGLVR--SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY--LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 622 ~~~e~L~elI~--~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy--vs~e~~eLde~AkeAGVtil~ 686 (1201)
...+.+.+++. ++|+|++++-......-.-+|+++|+.+.-+.= ..-.-.-+.+.|++.|..+++
T Consensus 80 ~G~~~l~~l~~~~~~D~vv~AivG~aGL~pt~~Ai~~gk~iaLANKEsLV~aG~li~~~a~~~~~~I~P 148 (389)
T TIGR00243 80 VGEEGICEMAALEDVDQVMNAIVGAAGLLPTLAAIRAGKTIALANKESLVTAGHLFLDAVKKYGVQLLP 148 (389)
T ss_pred ECHHHHHHHHcCCCCCEEEEhhhcHhhHHHHHHHHHCCCcEEEechhHHHhhHHHHHHHHHHcCCeEEe
Confidence 00234444444 479999999776676777788999998766531 111223345668889999987
No 417
>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=95.80 E-value=0.023 Score=64.87 Aligned_cols=81 Identities=21% Similarity=0.227 Sum_probs=62.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
-.+.|+|+|||+|.-|.+.+..|..+ ++.|+|+-|.-....+.|.+- +.+ |. .++++++.+|+|++++
T Consensus 15 ~LkgK~iaIIGYGsQG~ahalNLRDS-GlnViiGlr~g~~s~~kA~~d-Gf~-----V~-----~v~ea~k~ADvim~L~ 82 (338)
T COG0059 15 LLKGKKVAIIGYGSQGHAQALNLRDS-GLNVIIGLRKGSSSWKKAKED-GFK-----VY-----TVEEAAKRADVVMILL 82 (338)
T ss_pred HhcCCeEEEEecChHHHHHHhhhhhc-CCcEEEEecCCchhHHHHHhc-CCE-----ee-----cHHHHhhcCCEEEEeC
Confidence 46689999999999999999998775 678888877666544444432 333 22 4778889999999999
Q ss_pred CCcccHHHHHHHH
Q psy12817 642 PYNLHHHVAEFCI 654 (1201)
Q Consensus 642 P~~~h~~VakacI 654 (1201)
|...|..+-+..|
T Consensus 83 PDe~q~~vy~~~I 95 (338)
T COG0059 83 PDEQQKEVYEKEI 95 (338)
T ss_pred chhhHHHHHHHHh
Confidence 9988888877554
No 418
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.79 E-value=0.03 Score=60.44 Aligned_cols=76 Identities=12% Similarity=0.145 Sum_probs=57.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEE-EeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITL-GSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS----- 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtV-adR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~----- 633 (1201)
|+.|+|.| +|.+|+.+++.|++. +.+|++ ..|+.++.+++.... .++..+.+|+.| .+.+++++++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~~ 77 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQE-GYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD--ENQVVAMFTAIDQHD 77 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC--HHHHHHHHHHHHHhC
Confidence 57899999 699999999999976 567765 578877766554432 246778999998 7778776654
Q ss_pred --CcEEEEcCCC
Q psy12817 634 --ADLVVSLLPY 643 (1201)
Q Consensus 634 --~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 78 ~~id~vi~~ag~ 89 (247)
T PRK09730 78 EPLAALVNNAGI 89 (247)
T ss_pred CCCCEEEECCCC
Confidence 5899999754
No 419
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.78 E-value=0.034 Score=61.82 Aligned_cols=109 Identities=17% Similarity=0.259 Sum_probs=69.9
Q ss_pred cccccccccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHHc----
Q psy12817 553 KSRHKADIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNEF---- 609 (1201)
Q Consensus 553 ~~~s~~~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~~---- 609 (1201)
...+...++-.+..+|+|+|.|.||+.+++.|+|.+--++++.|.+. .+++.+++.+
T Consensus 18 ~l~G~~~lekl~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~In 97 (263)
T COG1179 18 RLYGEDGLEKLKQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQIN 97 (263)
T ss_pred HHcChhHHHHHhhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhC
Confidence 34444555566778999999999999999999998755677776431 1333344333
Q ss_pred CCeeEEEee-cCCCCchHHHhhcc-CCcEEEEcCCC-cccHHHHHHHHHcCCeEEEc
Q psy12817 610 GRVEATLID-VNNGGSDNLSGLVR-SADLVVSLLPY-NLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 610 ~~v~~v~lD-V~D~~~e~L~elI~-~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~ 663 (1201)
|.++....+ .-+ ++.+++++. +.|.||+|+-. ..-..++..|.+++.++++.
T Consensus 98 P~c~V~~~~~f~t--~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss 152 (263)
T COG1179 98 PECEVTAINDFIT--EENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISS 152 (263)
T ss_pred CCceEeehHhhhC--HhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEee
Confidence 444433322 222 567777776 48999998843 23355666666666666654
No 420
>PRK07023 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.025 Score=61.40 Aligned_cols=73 Identities=12% Similarity=0.111 Sum_probs=54.5
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc----------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR---------- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~---------- 632 (1201)
|++|+|.| +|.+|+.+++.|++. +.+|++++|+.++.. .... .++..+.+|+.| .+++++++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~-G~~v~~~~r~~~~~~--~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~~ 75 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP-GIAVLGVARSRHPSL--AAAAGERLAEVELDLSD--AAAAAAWLAGDLLAAFVDG 75 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC-CCEEEEEecCcchhh--hhccCCeEEEEEeccCC--HHHHHHHHHHHHHHHhccC
Confidence 67999999 699999999999986 578888898865421 2222 247788999998 777776432
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 76 ~~~~~~v~~ag 86 (243)
T PRK07023 76 ASRVLLINNAG 86 (243)
T ss_pred CCceEEEEcCc
Confidence 3678888864
No 421
>PRK05855 short chain dehydrogenase; Validated
Probab=95.76 E-value=0.031 Score=68.02 Aligned_cols=77 Identities=14% Similarity=0.237 Sum_probs=62.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS----- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~----- 633 (1201)
..++++|+| +|.+|+.+++.|+++ +.+|++++|+.++++++++.. .++..+.+|++| .+.+.+++++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFARE-GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 457899999 699999999999986 578999999998887766543 246788999998 7787776653
Q ss_pred --CcEEEEcCCC
Q psy12817 634 --ADLVVSLLPY 643 (1201)
Q Consensus 634 --~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 391 g~id~lv~~Ag~ 402 (582)
T PRK05855 391 GVPDIVVNNAGI 402 (582)
T ss_pred CCCcEEEECCcc
Confidence 7999999853
No 422
>PRK08017 oxidoreductase; Provisional
Probab=95.76 E-value=0.032 Score=60.71 Aligned_cols=73 Identities=11% Similarity=0.192 Sum_probs=56.4
Q ss_pred CCeEEEEcC-chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--------CCc
Q psy12817 565 SRNVLLLGA-GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--------SAD 635 (1201)
Q Consensus 565 mkKVLILGA-G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--------~~D 635 (1201)
+++|+|.|+ |.+|+.+++.|++. +.+|++++|+.++.+.+.+ . ++..+.+|+.| .+++.++++ ..|
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~-~-~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRR-GYRVLAACRKPDDVARMNS-L-GFTGILLDLDD--PESVERAADEVIALTDNRLY 76 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHhHHHHh-C-CCeEEEeecCC--HHHHHHHHHHHHHhcCCCCe
Confidence 368999995 99999999999876 5789999999988776543 2 57788899988 666655442 357
Q ss_pred EEEEcCC
Q psy12817 636 LVVSLLP 642 (1201)
Q Consensus 636 VVIs~lP 642 (1201)
.+|++..
T Consensus 77 ~ii~~ag 83 (256)
T PRK08017 77 GLFNNAG 83 (256)
T ss_pred EEEECCC
Confidence 7888764
No 423
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.04 Score=60.52 Aligned_cols=76 Identities=14% Similarity=0.258 Sum_probs=60.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc---CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR---SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~---~~ 634 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|++++|+.++++++...+ .++..+.+|++| .+++.++++ ..
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAE-GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSS--PEAREQLAAEAGDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHhCCC
Confidence 358999999 589999999999986 569999999998877755432 236678899998 777776654 58
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|++|++..
T Consensus 83 d~lv~~ag 90 (259)
T PRK06125 83 DILVNNAG 90 (259)
T ss_pred CEEEECCC
Confidence 99999874
No 424
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=95.75 E-value=0.053 Score=62.58 Aligned_cols=77 Identities=19% Similarity=0.171 Sum_probs=51.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEE------------EeecCCCCchHHHhhc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEAT------------LIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v------------~lDV~D~~~e~L~elI 631 (1201)
.|+||+|||+|.||..++..|.+. +++|++++|+.. .+.+... +.... .+...+ .. +.+
T Consensus 1 ~~mkI~IiG~G~mG~~~A~~L~~~-G~~V~~~~r~~~-~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~----~~-~~~ 71 (341)
T PRK08229 1 MMARICVLGAGSIGCYLGGRLAAA-GADVTLIGRARI-GDELRAH--GLTLTDYRGRDVRVPPSAIAFST----DP-AAL 71 (341)
T ss_pred CCceEEEECCCHHHHHHHHHHHhc-CCcEEEEecHHH-HHHHHhc--CceeecCCCcceecccceeEecc----Ch-hhc
Confidence 368999999999999999999887 578999999753 3444331 22111 011122 22 346
Q ss_pred cCCcEEEEcCCCcccHHH
Q psy12817 632 RSADLVVSLLPYNLHHHV 649 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~h~~V 649 (1201)
+++|+||.|+|......+
T Consensus 72 ~~~D~vil~vk~~~~~~~ 89 (341)
T PRK08229 72 ATADLVLVTVKSAATADA 89 (341)
T ss_pred cCCCEEEEEecCcchHHH
Confidence 789999999986544333
No 425
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.75 E-value=0.028 Score=59.24 Aligned_cols=67 Identities=18% Similarity=0.234 Sum_probs=45.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
..|+++|+|+|.+|+.+|+.|... +.+|+|++.++-++-+.. ..+.+. ..++++++++|++|.++..
T Consensus 22 ~Gk~vvV~GYG~vG~g~A~~lr~~-Ga~V~V~e~DPi~alqA~--~dGf~v----------~~~~~a~~~adi~vtaTG~ 88 (162)
T PF00670_consen 22 AGKRVVVIGYGKVGKGIARALRGL-GARVTVTEIDPIRALQAA--MDGFEV----------MTLEEALRDADIFVTATGN 88 (162)
T ss_dssp TTSEEEEE--SHHHHHHHHHHHHT-T-EEEEE-SSHHHHHHHH--HTT-EE----------E-HHHHTTT-SEEEE-SSS
T ss_pred CCCEEEEeCCCcccHHHHHHHhhC-CCEEEEEECChHHHHHhh--hcCcEe----------cCHHHHHhhCCEEEECCCC
Confidence 458999999999999999999887 589999999997653322 223332 2467788899999999864
No 426
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=95.75 E-value=0.037 Score=64.87 Aligned_cols=82 Identities=11% Similarity=0.201 Sum_probs=58.2
Q ss_pred eEEEEcCchhHHHHHHHHHhCC-------CCeEEEEeC-----CHHHHHHHHHHcCCeeEE---E----eecCCCCchHH
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDE-------NIHITLGSL-----LKEDIDKVTNEFGRVEAT---L----IDVNNGGSDNL 627 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~-------~~~VtVadR-----~~ekAe~La~~~~~v~~v---~----lDV~D~~~e~L 627 (1201)
||.|||+|..|.+++..|++++ +.+|++.+| +.+-.+.+...+.+.++. . +.++ .++
T Consensus 1 kI~VIGaG~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at----~dl 76 (342)
T TIGR03376 1 RVAVVGSGNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAV----PDL 76 (342)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEE----CCH
Confidence 6899999999999999998753 168999998 555555554433222211 0 1122 357
Q ss_pred HhhccCCcEEEEcCCCcccHHHHHH
Q psy12817 628 SGLVRSADLVVSLLPYNLHHHVAEF 652 (1201)
Q Consensus 628 ~elI~~~DVVIs~lP~~~h~~Vaka 652 (1201)
.++++++|+||.++|......+++.
T Consensus 77 ~eal~~ADiIIlAVPs~~i~~vl~~ 101 (342)
T TIGR03376 77 VEAAKGADILVFVIPHQFLEGICKQ 101 (342)
T ss_pred HHHHhcCCEEEEECChHHHHHHHHH
Confidence 8888999999999998877766654
No 427
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.74 E-value=0.13 Score=60.01 Aligned_cols=97 Identities=13% Similarity=0.196 Sum_probs=67.3
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.+|.|+|.|+.|+.....++.+|+ .+.+|+....... + +. .+.
T Consensus 143 ~l~g~~VgIIG~G~IG~~vA~~L~~~G~----------------~V~~~d~~~~~~~------~--~~---------~~~ 189 (330)
T PRK12480 143 PVKNMTVAIIGTGRIGAATAKIYAGFGA----------------TITAYDAYPNKDL------D--FL---------TYK 189 (330)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCC----------------EEEEEeCChhHhh------h--hh---------hcc
Confidence 3555689999999999999999999884 4566664322110 0 11 111
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCe
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSI 343 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsi 343 (1201)
..+ ++.++.+|+|+.+.-....+-.++..+.++. ||+| +++++++ .|+-+
T Consensus 190 ~~l-~ell~~aDiVil~lP~t~~t~~li~~~~l~~-mk~g------------------avlIN~a--RG~~v 239 (330)
T PRK12480 190 DSV-KEAIKDADIISLHVPANKESYHLFDKAMFDH-VKKG------------------AILVNAA--RGAVI 239 (330)
T ss_pred CCH-HHHHhcCCEEEEeCCCcHHHHHHHhHHHHhc-CCCC------------------cEEEEcC--Ccccc
Confidence 122 3467899999999977766667888888877 9999 8888876 44433
No 428
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=95.71 E-value=0.056 Score=69.05 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=72.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.+||+|||+|.||..++..|.+.+ ..+|++.||+.++++...+ . ++. +.. ..++.+.++++|+||.|+|.
T Consensus 3 ~~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~-~-g~~----~~~---~~~~~~~~~~aDvVilavp~ 73 (735)
T PRK14806 3 FGRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAVS-L-GVI----DRG---EEDLAEAVSGADVIVLAVPV 73 (735)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHH-C-CCC----Ccc---cCCHHHHhcCCCEEEECCCH
Confidence 378999999999999999998875 2579999999988766443 3 221 111 22456677899999999997
Q ss_pred cccHHHHHHH---HHcCCeEEEccCChH-HHHHHHHHHHHcCCEEE
Q psy12817 644 NLHHHVAEFC---IQHGKNLVTASYLSP-EMMALHERAASAGITVL 685 (1201)
Q Consensus 644 ~~h~~Vakac---IeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil 685 (1201)
..-..+++.. +..++-++|.+-+.. -++++.+......+.+|
T Consensus 74 ~~~~~vl~~l~~~~~~~~ii~d~~svk~~~~~~l~~~~~~~~~r~~ 119 (735)
T PRK14806 74 LAMEKVLADLKPLLSEHAIVTDVGSTKGNVVDAARAVFGELPAGFV 119 (735)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEcCCCchHHHHHHHHhccccCCeEE
Confidence 6545554433 344555666655432 33444433333344554
No 429
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=95.71 E-value=0.053 Score=64.00 Aligned_cols=123 Identities=15% Similarity=0.240 Sum_probs=88.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHh--------------h
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSG--------------L 630 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~e--------------l 630 (1201)
..+|.|+|.|+||-+++-.+++. +++|+-+|.+..+.+++.+.- .. ..+... .+-+++ .
T Consensus 9 ~~~I~ViGLGYVGLPlA~~fA~~-G~~ViG~DIn~~~Vd~ln~G~--~~--i~e~~~--~~~v~~~v~~g~lraTtd~~~ 81 (436)
T COG0677 9 SATIGVIGLGYVGLPLAAAFASA-GFKVIGVDINQKKVDKLNRGE--SY--IEEPDL--DEVVKEAVESGKLRATTDPEE 81 (436)
T ss_pred ceEEEEEccccccHHHHHHHHHc-CCceEeEeCCHHHHHHHhCCc--ce--eecCcH--HHHHHHHHhcCCceEecChhh
Confidence 48999999999999999999986 588999999999999887532 11 122222 111222 2
Q ss_pred ccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHH
Q psy12817 631 VRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDA 705 (1201)
Q Consensus 631 I~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~ide 705 (1201)
+++||+.|.|+|..+.. -+--|+||+....+.+ ...-+.|-.++.|.-.-||-+.=++..+++.
T Consensus 82 l~~~dv~iI~VPTPl~~----------~~~pDls~v~~aa~sI-a~~L~kG~LVIlEST~~PGTTe~v~~plle~ 145 (436)
T COG0677 82 LKECDVFIICVPTPLKK----------YREPDLSYVESAARSI-APVLKKGDLVILESTTPPGTTEEVVKPLLEE 145 (436)
T ss_pred cccCCEEEEEecCCcCC----------CCCCChHHHHHHHHHH-HHhcCCCCEEEEecCCCCCcHHHHHHHHHhh
Confidence 34799999999987641 2445778876666666 4455788888899999999877666655543
No 430
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.045 Score=59.72 Aligned_cols=76 Identities=14% Similarity=0.260 Sum_probs=58.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc--CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF--GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~--~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
..++|+|.| +|.+|+.+++.|+++ +.+|++++|+.+..+. .... .++..+.+|+.+ .+++.++++ .
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~-G~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAK-GARVALLDRSEDVAEV-AAQLLGGNAKGLVCDVSD--SQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHH-HHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHhCC
Confidence 457999999 699999999999986 5789999998765332 2222 235678899998 777776654 4
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 90 ~d~vi~~ag~ 99 (255)
T PRK06841 90 IDILVNSAGV 99 (255)
T ss_pred CCEEEECCCC
Confidence 6999999854
No 431
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.71 E-value=0.045 Score=60.01 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=57.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++.++ +.+.++++... ++.++.+|++| .+++.++++ ..
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~--~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLRE-GAKVAVLYNSAENEAKELREK--GVFTIKCDVGN--RDQVKKSKEVVEKEFGRV 80 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHhC--CCeEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 358999999 699999999999987 467776655 44555555432 57788999998 777777665 47
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 81 d~li~~ag~ 89 (255)
T PRK06463 81 DVLVNNAGI 89 (255)
T ss_pred CEEEECCCc
Confidence 999999754
No 432
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.70 E-value=0.058 Score=64.72 Aligned_cols=128 Identities=17% Similarity=0.216 Sum_probs=79.3
Q ss_pred cCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccc
Q psy12817 193 IGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 193 i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s 272 (1201)
+...+|+|+|+|.+|+.+...+...|+. .+.+++....+...+....|+... .+.
T Consensus 178 l~~~~VlViGaG~iG~~~a~~L~~~G~~---------------~V~v~~rs~~ra~~la~~~g~~~i---------~~~- 232 (417)
T TIGR01035 178 LKGKKALLIGAGEMGELVAKHLLRKGVG---------------KILIANRTYERAEDLAKELGGEAV---------KFE- 232 (417)
T ss_pred ccCCEEEEECChHHHHHHHHHHHHCCCC---------------EEEEEeCCHHHHHHHHHHcCCeEe---------eHH-
Confidence 4458999999999999999999888842 456776665554444443443110 011
Q ss_pred hhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCC
Q psy12817 273 LFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTI 352 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTi 352 (1201)
.. .+.+..+|+||+|.. ... .+++.++++..++... +-.+|+|++. -. .+
T Consensus 233 ~l-~~~l~~aDvVi~aT~--s~~-~ii~~e~l~~~~~~~~---------------~~~~viDla~--Pr---------di 282 (417)
T TIGR01035 233 DL-EEYLAEADIVISSTG--APH-PIVSKEDVERALRERT---------------RPLFIIDIAV--PR---------DV 282 (417)
T ss_pred HH-HHHHhhCCEEEECCC--CCC-ceEcHHHHHHHHhcCC---------------CCeEEEEeCC--CC---------CC
Confidence 11 234567999999953 233 4789999988433210 1178999962 11 22
Q ss_pred CCCeeeccCCCCccccccccCCeEEEeeCCcCCCch
Q psy12817 353 DTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLP 388 (1201)
Q Consensus 353 d~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP 388 (1201)
|..+ -.-+|+.+|.+|++-..+.
T Consensus 283 d~~v-------------~~l~~v~l~~vDdl~~~~~ 305 (417)
T TIGR01035 283 DPAV-------------ARLEGVFLYDVDDLQPVVE 305 (417)
T ss_pred Chhh-------------cCcCCeEEEEHHHHHHHHH
Confidence 2211 1236888999998866554
No 433
>PRK06223 malate dehydrogenase; Reviewed
Probab=95.69 E-value=0.079 Score=60.63 Aligned_cols=72 Identities=19% Similarity=0.205 Sum_probs=48.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe-----eEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV-----EATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v-----~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
|+||.|+|+|.||..++..++..+-.+|+++|+++++++..+..+... ....+..+. .++ .++++|+||.
T Consensus 2 ~~KI~VIGaG~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~~-~~~~aDiVii 76 (307)
T PRK06223 2 RKKISIIGAGNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTN----DYE-DIAGSDVVVI 76 (307)
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCC----CHH-HHCCCCEEEE
Confidence 789999999999999999988764228999999888765544322110 001122211 233 4689999999
Q ss_pred cC
Q psy12817 640 LL 641 (1201)
Q Consensus 640 ~l 641 (1201)
+.
T Consensus 77 ~~ 78 (307)
T PRK06223 77 TA 78 (307)
T ss_pred CC
Confidence 97
No 434
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=95.68 E-value=0.029 Score=65.47 Aligned_cols=88 Identities=14% Similarity=0.135 Sum_probs=55.7
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+...++|+|||+|.||+.++++|.+.+..+|+|++|+.+. ..+.+. .....++..++|+||+|+
T Consensus 171 ~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~-----~~~~~~-----------~~~~~~~~~~~DvVIs~t 234 (338)
T PRK00676 171 KSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLT-----LPYRTV-----------VREELSFQDPYDVIFFGS 234 (338)
T ss_pred CccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccc-----cchhhh-----------hhhhhhcccCCCEEEEcC
Confidence 3567999999999999999999999866679999999842 111000 001123446899999973
Q ss_pred --CCcccHHHHHHHHHc--CCeEEEccC
Q psy12817 642 --PYNLHHHVAEFCIQH--GKNLVTASY 665 (1201)
Q Consensus 642 --P~~~h~~VakacIea--Gkh~VD~Sy 665 (1201)
....|+.+.+.-++. +.-++|++.
T Consensus 235 ~~Tas~~p~i~~~~~~~~~~r~~iDLAv 262 (338)
T PRK00676 235 SESAYAFPHLSWESLADIPDRIVFDFNV 262 (338)
T ss_pred CcCCCCCceeeHHHHhhccCcEEEEecC
Confidence 122233222222221 136888863
No 435
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.67 E-value=0.037 Score=61.20 Aligned_cols=76 Identities=11% Similarity=0.183 Sum_probs=57.6
Q ss_pred CCCeEEEEcCc---hhHHHHHHHHHhCCCCeEEEEeCCHH---HHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLGAG---YVSRPLIEYLHRDENIHITLGSLLKE---DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILGAG---~VG~~va~~La~~~~~~VtVadR~~e---kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|.++|.|++ .+|+.+++.|++. +.+|.+++|+.+ .+++++++.+.+..+.+|++| .++++++++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 85 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRAL-GAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE--PGQLEAVFARIAEE 85 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCC--HHHHHHHHHHHHHH
Confidence 45789999953 8999999999986 478988899854 345565555555678899998 777766543
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 86 ~g~ld~lv~nAg 97 (258)
T PRK07533 86 WGRLDFLLHSIA 97 (258)
T ss_pred cCCCCEEEEcCc
Confidence 4699999975
No 436
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.05 Score=58.73 Aligned_cols=77 Identities=17% Similarity=0.259 Sum_probs=56.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.++|+|.| +|.+|+.+++.|++.+ .++++..+ +.+.++++.+.. .++..+.+|+.| .+++.++++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADG-FAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD--AAAVTRLFDAAETA 80 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHH
Confidence 458999999 6999999999999874 57666555 444444443322 246788899998 777777765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 81 ~~~id~vi~~ag~ 93 (245)
T PRK12937 81 FGRIDVLVNNAGV 93 (245)
T ss_pred cCCCCEEEECCCC
Confidence 57999999753
No 437
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.051 Score=59.67 Aligned_cols=76 Identities=14% Similarity=0.227 Sum_probs=57.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHH---HHHHHcCCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDID---KVTNEFGRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe---~La~~~~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+.++++|.| +|.+|+.+++.|+++ +.+|++++|+.+..+ ++.....++..+.+|+.+ .++++++++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARH-GANLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 358999999 799999999999987 578999999875322 222112246678899998 777776655
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 82 ~id~vi~~ag 91 (263)
T PRK08226 82 RIDILVNNAG 91 (263)
T ss_pred CCCEEEECCC
Confidence 4699999875
No 438
>PRK09134 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.038 Score=60.65 Aligned_cols=76 Identities=18% Similarity=0.274 Sum_probs=56.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+|+++|.| +|.+|+.+++.|++.+ .+|.+.++ +.++++.+.... .++..+.+|++| .+.+.++++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~ 84 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHG-FDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD--EAEVRALVARASAA 84 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 457899999 7999999999998864 67766544 555555544332 346778899998 777777664
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 85 ~~~iD~vi~~ag 96 (258)
T PRK09134 85 LGPITLLVNNAS 96 (258)
T ss_pred cCCCCEEEECCc
Confidence 3699999974
No 439
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.042 Score=61.01 Aligned_cols=75 Identities=15% Similarity=0.238 Sum_probs=57.2
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC----C-eeEEEeecCCCCchHHHhhcc-------
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG----R-VEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~----~-v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.++.. + +..+.+|++| .+.+.+++.
T Consensus 1 k~vlItGas~giG~~la~~la~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ-GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHG 77 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcC
Confidence 4799999 799999999999986 5789999999887766654431 1 3446799998 777665554
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 78 ~id~lv~~ag~ 88 (272)
T PRK07832 78 SMDVVMNIAGI 88 (272)
T ss_pred CCCEEEECCCC
Confidence 37999999853
No 440
>PRK14030 glutamate dehydrogenase; Provisional
Probab=95.65 E-value=0.12 Score=62.56 Aligned_cols=145 Identities=17% Similarity=0.117 Sum_probs=95.5
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEE--------Ee---CCHHHHHHH---HH-----------HcCCeeEEE
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITL--------GS---LLKEDIDKV---TN-----------EFGRVEATL 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtV--------ad---R~~ekAe~L---a~-----------~~~~v~~v~ 616 (1201)
+.+.++|+|=|.|.||+.++++|.+. +.+|+. ++ .+.++++.+ .+ .+|+++.+
T Consensus 225 ~l~g~~vaIQGfGnVG~~aA~~L~e~-GakvVavSD~~G~i~d~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~ga~~i- 302 (445)
T PRK14030 225 DIKGKTVAISGFGNVAWGAATKATEL-GAKVVTISGPDGYIYDPDGISGEKIDYMLELRASGNDIVAPYAEKFPGSTFF- 302 (445)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEcCCceEECCCCCCHHHHHHHHHHHHhcCccHHHHHhcCCCCEEc-
Confidence 45678999999999999999999886 566554 56 566653222 21 22232221
Q ss_pred eecCCCCchHHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEeccccCc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNEVGLDP 692 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e~GlDP 692 (1201)
.+ +.+-+ .+||+.+=|. ....+..-+..-.+.++.+|...- .+++ -++.-+++||.++++
T Consensus 303 ---~~---~~~~~--~~cDVliPcAl~n~I~~~na~~l~~~~ak~V~EgAN~p~t~e---A~~iL~~rGI~~vPD----- 366 (445)
T PRK14030 303 ---AG---KKPWE--QKVDIALPCATQNELNGEDADKLIKNGVLCVAEVSNMGCTAE---AIDKFIAAKQLFAPG----- 366 (445)
T ss_pred ---CC---cccee--ccccEEeeccccccCCHHHHHHHHHcCCeEEEeCCCCCCCHH---HHHHHHHCCCEEeCc-----
Confidence 11 22222 3799999886 677888888888888999999853 4444 344568899999872
Q ss_pred hhHHHHHHHHHHHhhhcCCcEEEEEeecCCCCCCCCCCCccccccccChHHHHHH
Q psy12817 693 GIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLN 747 (1201)
Q Consensus 693 GIdhmlA~~~idei~~~ggkV~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a 747 (1201)
-+-..||-+.|..-|...+- .+.|+.+.|-..
T Consensus 367 ------------~~aNAGGVivs~~E~~qn~~-----------~~~w~~eeV~~~ 398 (445)
T PRK14030 367 ------------KAVNAGGVATSGLEMSQNAM-----------HLSWSAEEVDEK 398 (445)
T ss_pred ------------ceecCCCeeeehhhhhcccc-----------ccCcCHHHHHHH
Confidence 23345676666555555431 267998877433
No 441
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.046 Score=68.34 Aligned_cols=78 Identities=19% Similarity=0.217 Sum_probs=63.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++++|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.. .++..+.+|++| .+.+.++++
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~ 445 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEA-GATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD--SAAVDHTVKDILAE 445 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHh
Confidence 3467899999 699999999999987 578999999998887766543 347788999998 788877765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 446 ~g~id~li~~Ag~ 458 (657)
T PRK07201 446 HGHVDYLVNNAGR 458 (657)
T ss_pred cCCCCEEEECCCC
Confidence 57999999864
No 442
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=95.64 E-value=0.072 Score=62.10 Aligned_cols=99 Identities=20% Similarity=0.177 Sum_probs=60.9
Q ss_pred eEEEEcCchhHHHHHHHHHhCC---CCeEEE-EeCCHHHHHHHHHHcC----C----eeE---------EEeecCC-CCc
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDE---NIHITL-GSLLKEDIDKVTNEFG----R----VEA---------TLIDVNN-GGS 624 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~---~~~VtV-adR~~ekAe~La~~~~----~----v~~---------v~lDV~D-~~~ 624 (1201)
||+|.|+|+||+.+++.|.+++ +++|+. .+....+.....-+|. . ++. ..+.+.. .++
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~p 80 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPTP 80 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCCh
Confidence 6899999999999999988753 467553 3333222211111221 0 000 0111220 012
Q ss_pred hHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 625 e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+.+.=.-.++|+|+.|++...+.+.+..++++|+..|+.|.
T Consensus 81 ~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~Sa 121 (325)
T TIGR01532 81 EALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSH 121 (325)
T ss_pred hhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecC
Confidence 22221113799999999999999999999999988888864
No 443
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=95.63 E-value=0.12 Score=57.44 Aligned_cols=119 Identities=16% Similarity=0.260 Sum_probs=82.4
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc-
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN- 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~- 644 (1201)
|+|.+||.|+||..+++.|.+. +++|++.|++++..++++.. +++ .+.. .+++.+.+....+|--++|..
T Consensus 1 M~iGmiGLGrMG~n~v~rl~~~-ghdvV~yD~n~~av~~~~~~--ga~----~a~s--l~el~~~L~~pr~vWlMvPag~ 71 (300)
T COG1023 1 MQIGMIGLGRMGANLVRRLLDG-GHDVVGYDVNQTAVEELKDE--GAT----GAAS--LDELVAKLSAPRIVWLMVPAGD 71 (300)
T ss_pred CcceeeccchhhHHHHHHHHhC-CCeEEEEcCCHHHHHHHHhc--CCc----cccC--HHHHHHhcCCCcEEEEEccCCC
Confidence 5799999999999999999986 68999999999988887764 222 1222 344555556678888888876
Q ss_pred ccHHHHH---HHHHcCCeEEEc--cCChHHHHHHHHHHHHcCCEEEeccccCchhH
Q psy12817 645 LHHHVAE---FCIQHGKNLVTA--SYLSPEMMALHERAASAGITVLNEVGLDPGID 695 (1201)
Q Consensus 645 ~h~~Vak---acIeaGkh~VD~--Syvs~e~~eLde~AkeAGVtil~e~GlDPGId 695 (1201)
....+++ .-+++|=-++|- ||..+.++.. ++.+++|+-++ .+|-.-|+.
T Consensus 72 it~~vi~~la~~L~~GDivIDGGNS~y~Ds~rr~-~~l~~kgi~fl-D~GTSGG~~ 125 (300)
T COG1023 72 ITDAVIDDLAPLLSAGDIVIDGGNSNYKDSLRRA-KLLAEKGIHFL-DVGTSGGVW 125 (300)
T ss_pred chHHHHHHHHhhcCCCCEEEECCccchHHHHHHH-HHHHhcCCeEE-eccCCCCch
Confidence 4444443 335677777876 5655554443 55678888876 366555543
No 444
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.056 Score=59.10 Aligned_cols=76 Identities=12% Similarity=0.148 Sum_probs=59.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.+.++|.| ++.+|+.+++.|++. +.+|++++|+.++++++.+.. ..+..+.+|+.| .++++++++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARL-GATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS--QESIRHLFDAIEQQF 80 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 357999999 578999999999986 578999999999887765543 235567789988 777766542
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 81 g~~iD~li~nag 92 (227)
T PRK08862 81 NRAPDVLVNNWT 92 (227)
T ss_pred CCCCCEEEECCc
Confidence 5799999974
No 445
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=95.62 E-value=0.044 Score=59.50 Aligned_cols=77 Identities=19% Similarity=0.310 Sum_probs=57.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
+.++++|.| +|.+|+.+++.|+++ +.+|++. .|+.++.+++.+.. .++.++.+|++| .+.+.+++++
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQE-GAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK--VEDANRLVEEAVNH 81 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHH
Confidence 358999999 799999999999987 4676654 45666655554332 247788999998 7888777765
Q ss_pred ---CcEEEEcCCC
Q psy12817 634 ---ADLVVSLLPY 643 (1201)
Q Consensus 634 ---~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 82 ~~~id~vi~~ag~ 94 (247)
T PRK12935 82 FGKVDILVNNAGI 94 (247)
T ss_pred cCCCCEEEECCCC
Confidence 6999999754
No 446
>PLN02477 glutamate dehydrogenase
Probab=95.61 E-value=0.093 Score=62.93 Aligned_cols=142 Identities=16% Similarity=0.227 Sum_probs=91.2
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCC----------HHHHHHHHHHc------CCeeEEEeecCCCCc
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLL----------KEDIDKVTNEF------GRVEATLIDVNNGGS 624 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~----------~ekAe~La~~~------~~v~~v~lDV~D~~~ 624 (1201)
+.+.++|+|.|.|.||+.+++.|.+. +.+|+ |+|.+ .+++.+..+.. ++.+. +.+
T Consensus 203 ~l~g~~VaIqGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iy~~~GLD~~~L~~~k~~~g~l~~~~~a~~----i~~--- 274 (410)
T PLN02477 203 SIAGQTFVIQGFGNVGSWAAQLIHEK-GGKIVAVSDITGAVKNENGLDIPALRKHVAEGGGLKGFPGGDP----IDP--- 274 (410)
T ss_pred CccCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCchhccccceE----ecC---
Confidence 35678999999999999999999886 46755 88876 66664433322 22111 222
Q ss_pred hHHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 625 DNLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 625 e~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
+++-. .+||++|=|. ....+..-+.. .++.+|... .++++.. +.-+++||.+++
T Consensus 275 ~e~l~--~~~DvliP~Al~~~I~~~na~~---i~ak~I~egAN~p~t~ea~---~~L~~rGI~~~P-------------- 332 (410)
T PLN02477 275 DDILV--EPCDVLIPAALGGVINKENAAD---VKAKFIVEAANHPTDPEAD---EILRKKGVVVLP-------------- 332 (410)
T ss_pred cccee--ccccEEeeccccccCCHhHHHH---cCCcEEEeCCCCCCCHHHH---HHHHHCCcEEEC--------------
Confidence 22222 3899999885 66677665554 477788775 3555443 446789999987
Q ss_pred HHHHHhhhcCCcEEEEEeecCCCCCCCCCCCccccccccChHHHHHH
Q psy12817 701 ECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLN 747 (1201)
Q Consensus 701 ~~idei~~~ggkV~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a 747 (1201)
|-+...||-+.|+.-|+..+- .+.|+.+.+...
T Consensus 333 ---D~~aNaGGVivs~~E~~qn~~-----------~~~w~~~~v~~~ 365 (410)
T PLN02477 333 ---DIYANSGGVTVSYFEWVQNIQ-----------GFMWEEEKVNRE 365 (410)
T ss_pred ---hHHhCCCCeeeeHHHhhhccc-----------cCCCCHHHHHHH
Confidence 334456677766665665432 257887766433
No 447
>PRK05599 hypothetical protein; Provisional
Probab=95.61 E-value=0.044 Score=60.21 Aligned_cols=73 Identities=18% Similarity=0.283 Sum_probs=57.7
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----CeeEEEeecCCCCchHHHhhcc-------
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
|.++|.| ++.+|+.+++.|+ . +.+|++++|+.++++++++++. .+..+.+|+.| .+++++++.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~-g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H-GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQD--LDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCC--HHHHHHHHHHHHHhcC
Confidence 4689999 6899999999998 4 6889999999998887766541 26678999998 777765543
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 77 ~id~lv~nag 86 (246)
T PRK05599 77 EISLAVVAFG 86 (246)
T ss_pred CCCEEEEecC
Confidence 4799999864
No 448
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.61 E-value=0.035 Score=62.01 Aligned_cols=76 Identities=12% Similarity=0.268 Sum_probs=57.6
Q ss_pred CCeEEEEcCc---hhHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLGAG---YVSRPLIEYLHRDENIHITLGSLLK---EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILGAG---~VG~~va~~La~~~~~~VtVadR~~---ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.|.++|.|++ .+|+.+++.|++. +.+|++++|+. +.++++....+.+..+.+|++| .++++++++
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~-G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE--DASIDAMFAELGKVW 82 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHC-CCEEEEEecchhHHHHHHHHHhccCCceEeecCCCC--HHHHHHHHHHHHhhc
Confidence 4789999975 7999999999986 47888888873 3445555444456678899998 788776653
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 83 g~iD~linnAg~ 94 (262)
T PRK07984 83 PKFDGFVHSIGF 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 36999999853
No 449
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=95.60 E-value=0.027 Score=64.14 Aligned_cols=58 Identities=19% Similarity=0.405 Sum_probs=47.3
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs~lP 642 (1201)
|||||+| .|.+|..+++.|. ++.+|+..++.. +|++| ++.+.+++++ .|+||||..
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~--~~~~v~a~~~~~-----------------~Ditd--~~~v~~~i~~~~PDvVIn~AA 59 (281)
T COG1091 1 MKILITGANGQLGTELRRALP--GEFEVIATDRAE-----------------LDITD--PDAVLEVIRETRPDVVINAAA 59 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC--CCceEEeccCcc-----------------ccccC--hHHHHHHHHhhCCCEEEECcc
Confidence 3599999 6999999999987 567777666543 68888 8889999985 699999997
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
+.
T Consensus 60 yt 61 (281)
T COG1091 60 YT 61 (281)
T ss_pred cc
Confidence 64
No 450
>PRK08605 D-lactate dehydrogenase; Validated
Probab=95.60 E-value=0.16 Score=59.21 Aligned_cols=93 Identities=14% Similarity=0.118 Sum_probs=64.1
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHH-hhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIF-QELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLY 270 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a-~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y 270 (1201)
.+.-.+|.|+|.|+.|+.....+ +.+|+ .+.+|+...... ... .. .+
T Consensus 143 ~l~g~~VgIIG~G~IG~~vA~~L~~~~g~----------------~V~~~d~~~~~~--~~~--~~------------~~ 190 (332)
T PRK08605 143 SIKDLKVAVIGTGRIGLAVAKIFAKGYGS----------------DVVAYDPFPNAK--AAT--YV------------DY 190 (332)
T ss_pred eeCCCEEEEECCCHHHHHHHHHHHhcCCC----------------EEEEECCCccHh--HHh--hc------------cc
Confidence 45667999999999999888877 66763 344444322111 110 00 11
Q ss_pred cchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 271 RSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 271 ~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
...+ ++.++.+|+||.++--......|+..+.++. |||| ++++++|
T Consensus 191 ~~~l-~ell~~aDvIvl~lP~t~~t~~li~~~~l~~-mk~g------------------ailIN~s 236 (332)
T PRK08605 191 KDTI-EEAVEGADIVTLHMPATKYNHYLFNADLFKH-FKKG------------------AVFVNCA 236 (332)
T ss_pred cCCH-HHHHHhCCEEEEeCCCCcchhhhcCHHHHhc-CCCC------------------cEEEECC
Confidence 1122 3467789999999987777788999888888 9999 8999987
No 451
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.60 E-value=0.022 Score=55.18 Aligned_cols=86 Identities=19% Similarity=0.160 Sum_probs=60.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.+.++|+|+|.|.+|..-++.|.+. +.+|+|++.+.+..+ ..++... ..+++.++++|+|+.+++
T Consensus 5 l~~~~vlVvGgG~va~~k~~~Ll~~-gA~v~vis~~~~~~~------~~i~~~~--------~~~~~~l~~~~lV~~at~ 69 (103)
T PF13241_consen 5 LKGKRVLVVGGGPVAARKARLLLEA-GAKVTVISPEIEFSE------GLIQLIR--------REFEEDLDGADLVFAATD 69 (103)
T ss_dssp -TT-EEEEEEESHHHHHHHHHHCCC-TBEEEEEESSEHHHH------TSCEEEE--------SS-GGGCTTESEEEE-SS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-CCEEEEECCchhhhh------hHHHHHh--------hhHHHHHhhheEEEecCC
Confidence 4578999999999999999999986 489999999862222 2344321 234566889999999986
Q ss_pred C-cccHHHHHHHHHcCCeEEEc
Q psy12817 643 Y-NLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 643 ~-~~h~~VakacIeaGkh~VD~ 663 (1201)
. ..+..+.+.|-+.|+.+-..
T Consensus 70 d~~~n~~i~~~a~~~~i~vn~~ 91 (103)
T PF13241_consen 70 DPELNEAIYADARARGILVNVV 91 (103)
T ss_dssp -HHHHHHHHHHHHHTTSEEEET
T ss_pred CHHHHHHHHHHHhhCCEEEEEC
Confidence 4 45677788887777766554
No 452
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.061 Score=58.25 Aligned_cols=78 Identities=12% Similarity=0.150 Sum_probs=56.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLV------ 631 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI------ 631 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++.+.+.+ +.+..+.+|+.+.+.+.+.+++
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAA-GATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 458999999 699999999999986 578999999998877765543 2355677888641122333322
Q ss_pred --cCCcEEEEcCC
Q psy12817 632 --RSADLVVSLLP 642 (1201)
Q Consensus 632 --~~~DVVIs~lP 642 (1201)
...|+||++..
T Consensus 84 ~~~~id~vi~~ag 96 (239)
T PRK08703 84 TQGKLDGIVHCAG 96 (239)
T ss_pred hCCCCCEEEEecc
Confidence 35699999975
No 453
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.59 E-value=0.031 Score=63.82 Aligned_cols=76 Identities=20% Similarity=0.339 Sum_probs=55.6
Q ss_pred cCCCeEEEEcCch-hHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGY-VSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~-VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+.++|+|+|+|. +|++++..|.+.+ ..|+++.|. + ..+.+.++++|+|||++
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~g-atVtv~~~~---t----------------------~~L~~~~~~aDIvI~At 210 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNAN-ATVTICHSR---T----------------------QNLPELVKQADIIVGAV 210 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCC-CEEEEEeCC---c----------------------hhHHHHhccCCEEEEcc
Confidence 5578999999887 9999999998765 489999862 1 13555567899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccCC
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASYL 666 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Syv 666 (1201)
+.. + .+-...++.|.-++|..|.
T Consensus 211 G~~-~-~v~~~~lk~gavViDvg~n 233 (283)
T PRK14192 211 GKP-E-LIKKDWIKQGAVVVDAGFH 233 (283)
T ss_pred CCC-C-cCCHHHcCCCCEEEEEEEe
Confidence 521 1 2334556778788887664
No 454
>PLN02700 homoserine dehydrogenase family protein
Probab=95.58 E-value=0.12 Score=61.40 Aligned_cols=81 Identities=17% Similarity=0.121 Sum_probs=53.1
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccC---chhHHHHHHHHHHHhh
Q psy12817 633 SADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLD---PGIDHLLAMECIDAAH 707 (1201)
Q Consensus 633 ~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlD---PGIdhmlA~~~idei~ 707 (1201)
..+++|+|+|..-.....+.+++.|+|+|+.. ..+....++.+.+ +.|+.++-|.-+. |=|+.+ .++.
T Consensus 109 ~~~ViVD~T~s~~~~~~y~~aL~~G~hVVTaNK~~~a~~~~~~~~la-~~~~~~~yEatVgaGlPiI~tl------~~ll 181 (377)
T PLN02700 109 TGLVVVDCSASMETIGALNEAVDLGCCIVLANKKPLTSTLEDYDKLA-AHPRRIRHESTVGAGLPVIASL------NRIL 181 (377)
T ss_pred CCCEEEECCCChHHHHHHHHHHHCCCeEEcCCchHhccCHHHHHHHH-HcCCeEEEEeeeeeccchHHHH------HHHh
Confidence 36999999997444678899999999999984 3444445554545 4699888765332 433332 3343
Q ss_pred hcCCcEEEEEeec
Q psy12817 708 LNGGKVESFVSYC 720 (1201)
Q Consensus 708 ~~ggkV~sf~s~c 720 (1201)
..|.+|..++-..
T Consensus 182 ~sGd~I~~I~GIl 194 (377)
T PLN02700 182 SSGDPVHRIVGSL 194 (377)
T ss_pred hccCCEEEEEEEE
Confidence 4466777766433
No 455
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=95.57 E-value=0.036 Score=63.76 Aligned_cols=76 Identities=14% Similarity=0.262 Sum_probs=54.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH--HHHHHHHHHc--CCeeEEEeecCCCCchHHHhhccC--CcEEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK--EDIDKVTNEF--GRVEATLIDVNNGGSDNLSGLVRS--ADLVV 638 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~--ekAe~La~~~--~~v~~v~lDV~D~~~e~L~elI~~--~DVVI 638 (1201)
|||+|.| +|++|+.+++.|.+++...|+..++.. ...+.+.... +++..+..|+.| .+++.+++++ +|+||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~d~vi 78 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICD--RAELDRIFAQHQPDAVM 78 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCC--HHHHHHHHHhcCCCEEE
Confidence 4899999 699999999999987544455555431 2222222211 246778899998 8889888874 79999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
+|...
T Consensus 79 h~A~~ 83 (352)
T PRK10084 79 HLAAE 83 (352)
T ss_pred ECCcc
Confidence 99854
No 456
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.57 E-value=0.067 Score=65.60 Aligned_cols=100 Identities=21% Similarity=0.257 Sum_probs=77.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhccC--
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVRS-- 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~~-- 633 (1201)
...|+|+|-| .|.+|+.+++.+++.+--++.+.++++.+.-.+..++ | ...++-.||.| .+.+..++++
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD--~~~~~~~~~~~k 325 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRD--RDRVERAMEGHK 325 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEeccccc--HHHHHHHHhcCC
Confidence 4569999999 5899999999999887778999999998775554433 3 35678899998 8999999998
Q ss_pred CcEEEEcCCCc------cc------------HHHHHHHHHcCCe-EEEcc
Q psy12817 634 ADLVVSLLPYN------LH------------HHVAEFCIQHGKN-LVTAS 664 (1201)
Q Consensus 634 ~DVVIs~lP~~------~h------------~~VakacIeaGkh-~VD~S 664 (1201)
.|+|+.+.-+- ++ ..++++|+++|+. +|.+|
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iS 375 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIS 375 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEe
Confidence 99999997431 11 3467888888874 55555
No 457
>PRK09414 glutamate dehydrogenase; Provisional
Probab=95.56 E-value=0.17 Score=61.40 Aligned_cols=136 Identities=18% Similarity=0.213 Sum_probs=87.9
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEe----------CCHHHHHHHHHHc-CCeeEEE----eecCCCCch
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGS----------LLKEDIDKVTNEF-GRVEATL----IDVNNGGSD 625 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~Vt-Vad----------R~~ekAe~La~~~-~~v~~v~----lDV~D~~~e 625 (1201)
+.+.++|+|.|.|.||+.+++.|.+. +.+|+ |.| .+.+++.+..+.. ..+.-.. ....+ .+
T Consensus 229 ~l~g~rVaIqGfGnVG~~~A~~L~~~-GakVVavsDs~G~iyn~~GLD~~~L~~~k~~~~~~l~~~~~~~~~~~i~--~~ 305 (445)
T PRK09414 229 SFEGKRVVVSGSGNVAIYAIEKAQQL-GAKVVTCSDSSGYVYDEEGIDLEKLKEIKEVRRGRISEYAEEFGAEYLE--GG 305 (445)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCchhhhhhhcCCeecC--Cc
Confidence 45679999999999999999999886 46755 447 6777665554322 1111000 00111 22
Q ss_pred HHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHH
Q psy12817 626 NLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAME 701 (1201)
Q Consensus 626 ~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~ 701 (1201)
.+-++ +|||+|=|. ....+.+-+..-+..++.+|... .++++.. +.-+++||.+++
T Consensus 306 ~i~~~--d~DVliPaAl~n~It~~~a~~i~~~~akiIvEgAN~p~t~~A~---~~L~~rGI~~vP--------------- 365 (445)
T PRK09414 306 SPWSV--PCDIALPCATQNELDEEDAKTLIANGVKAVAEGANMPSTPEAI---EVFLEAGVLFAP--------------- 365 (445)
T ss_pred ccccc--CCcEEEecCCcCcCCHHHHHHHHHcCCeEEEcCCCCCCCHHHH---HHHHHCCcEEEC---------------
Confidence 33332 799999997 45677777777667788999885 3454443 446788999987
Q ss_pred HHHHhhhcCCcEEEEEeecCC
Q psy12817 702 CIDAAHLNGGKVESFVSYCGG 722 (1201)
Q Consensus 702 ~idei~~~ggkV~sf~s~cGG 722 (1201)
|-+-..||-+.|+.-|.+.
T Consensus 366 --D~laNaGGVivs~~E~~qn 384 (445)
T PRK09414 366 --GKAANAGGVATSGLEMSQN 384 (445)
T ss_pred --chhhcCCCeeeeehhhccc
Confidence 3344566777776666654
No 458
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=95.56 E-value=0.13 Score=58.11 Aligned_cols=145 Identities=17% Similarity=0.212 Sum_probs=91.1
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEe----------CCHHHHHHHHH---Hc-----------CCeeEEE
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGS----------LLKEDIDKVTN---EF-----------GRVEATL 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~Vt-Vad----------R~~ekAe~La~---~~-----------~~v~~v~ 616 (1201)
+.+.++|+|-|.|.||+.++++|.+. +.+|+ |.| .+.++++.+.+ .. ++.+.
T Consensus 35 ~l~g~~vaIqGfGnVG~~~a~~L~e~-GakvvaVsD~~G~i~~~~Gld~~~l~~l~~~~~~~~~~v~~~~~~~~~a~~-- 111 (254)
T cd05313 35 TLKGKRVAISGSGNVAQYAAEKLLEL-GAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTAKY-- 111 (254)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHhhcCCCCEE--
Confidence 45678999999999999999999886 46655 666 23444433221 11 11111
Q ss_pred eecCCCCchHHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEeccccCc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNEVGLDP 692 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e~GlDP 692 (1201)
+. .+++-.+ +||+.+=|. ....+..-+..-.+.++.+|... .++++ -++.-+++||.+++
T Consensus 112 --~~---~~~~~~~--~~DIliPcAl~~~I~~~na~~i~~~~ak~I~EgAN~p~t~~---a~~~L~~rGI~vvP------ 175 (254)
T cd05313 112 --FE---GKKPWEV--PCDIAFPCATQNEVDAEDAKLLVKNGCKYVAEGANMPCTAE---AIEVFRQAGVLFAP------ 175 (254)
T ss_pred --eC---CcchhcC--CCcEEEeccccccCCHHHHHHHHHcCCEEEEeCCCCCCCHH---HHHHHHHCCcEEEC------
Confidence 12 2233332 799999886 66778888887777788888885 35553 44556788999988
Q ss_pred hhHHHHHHHHHHHhhhcCCcEEEEEeecCCCCCCCCCCCccccccccChHHHHHH
Q psy12817 693 GIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLN 747 (1201)
Q Consensus 693 GIdhmlA~~~idei~~~ggkV~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a 747 (1201)
|-+-..||-+.|+.-|...+- .+.|+.+.+...
T Consensus 176 -----------D~laNaGGVivs~~E~~qn~~-----------~~~w~~e~V~~~ 208 (254)
T cd05313 176 -----------GKAANAGGVAVSGLEMSQNSQ-----------RLSWTAEEVDAK 208 (254)
T ss_pred -----------chhhcCCCeeeeHHHhhcccc-----------cccCCHHHHHHH
Confidence 223345666666555554431 246876555433
No 459
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=95.56 E-value=0.045 Score=63.45 Aligned_cols=68 Identities=21% Similarity=0.318 Sum_probs=48.4
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+.++|+|||+|.+|++++..|.+.+ ++|+++++. .+..+++. .. ++.. .+ ..++++++|+|+.++|
T Consensus 2 ~~kkIgiIG~G~mG~AiA~~L~~sG-~~Viv~~~~~~~~~~~a~-~~-Gv~~-----~s-----~~ea~~~ADiVvLaVp 68 (314)
T TIGR00465 2 KGKTVAIIGYGSQGHAQALNLRDSG-LNVIVGLRKGGASWKKAT-ED-GFKV-----GT-----VEEAIPQADLIMNLLP 68 (314)
T ss_pred CcCEEEEEeEcHHHHHHHHHHHHCC-CeEEEEECcChhhHHHHH-HC-CCEE-----CC-----HHHHHhcCCEEEEeCC
Confidence 3589999999999999999998764 677766554 33444433 32 3431 12 4556788999999998
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 69 p~ 70 (314)
T TIGR00465 69 DE 70 (314)
T ss_pred cH
Confidence 76
No 460
>PRK07574 formate dehydrogenase; Provisional
Probab=95.55 E-value=0.065 Score=63.78 Aligned_cols=109 Identities=15% Similarity=0.125 Sum_probs=0.0
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
....++|+|||+|.||+.+++.|... +.+|.+.||+....+..... ++.. ...++++++++|+|+.++
T Consensus 189 ~L~gktVGIvG~G~IG~~vA~~l~~f-G~~V~~~dr~~~~~~~~~~~--g~~~---------~~~l~ell~~aDvV~l~l 256 (385)
T PRK07574 189 DLEGMTVGIVGAGRIGLAVLRRLKPF-DVKLHYTDRHRLPEEVEQEL--GLTY---------HVSFDSLVSVCDVVTIHC 256 (385)
T ss_pred ecCCCEEEEECCCHHHHHHHHHHHhC-CCEEEEECCCCCchhhHhhc--Ccee---------cCCHHHHhhcCCEEEEcC
Q ss_pred CCcccHHHH-----HHHHHcCCeEEEccC-ChHHHHHHHHHHHHcCC
Q psy12817 642 PYNLHHHVA-----EFCIQHGKNLVTASY-LSPEMMALHERAASAGI 682 (1201)
Q Consensus 642 P~~~h~~Va-----kacIeaGkh~VD~Sy-vs~e~~eLde~AkeAGV 682 (1201)
|..-...-+ -+.++.|.-+|+++- ..-...+|.++.++..+
T Consensus 257 Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i 303 (385)
T PRK07574 257 PLHPETEHLFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHL 303 (385)
T ss_pred CCCHHHHHHhCHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCc
No 461
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.54 E-value=0.038 Score=64.38 Aligned_cols=94 Identities=13% Similarity=0.154 Sum_probs=68.6
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.+|.|+|.|+.|+...+.++.+|+ .+.+|+...... .....+.. +.
T Consensus 147 ~L~gktvgIiG~G~IG~~vA~~l~~~G~----------------~V~~~d~~~~~~--~~~~~~~~------------~~ 196 (333)
T PRK13243 147 DVYGKTIGIIGFGRIGQAVARRAKGFGM----------------RILYYSRTRKPE--AEKELGAE------------YR 196 (333)
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC----------------EEEEECCCCChh--hHHHcCCE------------ec
Confidence 4566899999999999999999999984 355565432111 11111211 11
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
. .+++++.+|+|+.++-..+.+-.+|..+.++. |||| ++++++|
T Consensus 197 -~-l~ell~~aDiV~l~lP~t~~T~~~i~~~~~~~-mk~g------------------a~lIN~a 240 (333)
T PRK13243 197 -P-LEELLRESDFVSLHVPLTKETYHMINEERLKL-MKPT------------------AILVNTA 240 (333)
T ss_pred -C-HHHHHhhCCEEEEeCCCChHHhhccCHHHHhc-CCCC------------------eEEEECc
Confidence 1 23567889999999998888888999999988 9999 8899886
No 462
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=95.53 E-value=0.0099 Score=60.93 Aligned_cols=71 Identities=20% Similarity=0.199 Sum_probs=51.4
Q ss_pred CeEEEEcC-chhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcC------CeeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 566 RNVLLLGA-GYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFG------RVEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 566 kKVLILGA-G~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~------~v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
+||.|+|+ |.+|..++..|...+-. ++.+.|++.++++..+..+. ... ..... ...+.++++|+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~-~~i~~------~~~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSP-VRITS------GDYEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEE-EEEEE------SSGGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccc-ccccc------ccccccccccEE
Confidence 69999998 99999999999876443 59999999888877665431 122 12211 234556799999
Q ss_pred EEcCCC
Q psy12817 638 VSLLPY 643 (1201)
Q Consensus 638 Is~lP~ 643 (1201)
|.+...
T Consensus 74 vitag~ 79 (141)
T PF00056_consen 74 VITAGV 79 (141)
T ss_dssp EETTST
T ss_pred EEeccc
Confidence 999843
No 463
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.043 Score=60.19 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=57.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
+.+.++|.| +|.+|+.+++.|++. +.+|.+.+|+.+ .++++.+.. .++..+.+|+.| .+.+.+++++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 83 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQA-GADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS--KADLRAAVARTEAE 83 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 457899999 799999999999986 578989998753 334443322 246778899998 7777766653
Q ss_pred ---CcEEEEcCCC
Q psy12817 634 ---ADLVVSLLPY 643 (1201)
Q Consensus 634 ---~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 84 ~g~id~li~~ag~ 96 (254)
T PRK06114 84 LGALTLAVNAAGI 96 (254)
T ss_pred cCCCCEEEECCCC
Confidence 5999999853
No 464
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.51 E-value=0.059 Score=57.16 Aligned_cols=78 Identities=15% Similarity=0.255 Sum_probs=56.8
Q ss_pred ccCCeEEEEEcCcH-HHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccc
Q psy12817 192 SIGPLTIVFTGSGN-VSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLY 270 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~-vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y 270 (1201)
++.-.+++|+|+|. +|..+...+.+.| +.+.+.... ++ +.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g----------------~~V~v~~r~--------------~~--------~l- 81 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRN----------------ATVTVCHSK--------------TK--------NL- 81 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCC----------------CEEEEEECC--------------ch--------hH-
Confidence 56679999999997 6999999998887 333333311 00 11
Q ss_pred cchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCC
Q psy12817 271 RSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADP 339 (1201)
Q Consensus 271 ~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~ 339 (1201)
.+.++.+|+||+++. .|.+|+.+++ +++ .+|+|++.+.
T Consensus 82 -----~~~l~~aDiVIsat~----~~~ii~~~~~----~~~------------------~viIDla~pr 119 (168)
T cd01080 82 -----KEHTKQADIVIVAVG----KPGLVKGDMV----KPG------------------AVVIDVGINR 119 (168)
T ss_pred -----HHHHhhCCEEEEcCC----CCceecHHHc----cCC------------------eEEEEccCCC
Confidence 235778999999964 4568999974 556 8999999876
No 465
>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.
Probab=95.51 E-value=0.07 Score=64.31 Aligned_cols=97 Identities=16% Similarity=0.162 Sum_probs=64.1
Q ss_pred eEEEEcCchhHHHHHHHHHhCCC-----CeEEEEeCCHH-------------------HHHHHH----HHcCCeeE--EE
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDEN-----IHITLGSLLKE-------------------DIDKVT----NEFGRVEA--TL 616 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~-----~~VtVadR~~e-------------------kAe~La----~~~~~v~~--v~ 616 (1201)
||+|+|+|.+|..++++|+..+- -+++|+|.+.= +++..+ +..|.+.. ..
T Consensus 1 kVlvVGaGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~~ 80 (435)
T cd01490 1 KVFLVGAGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITALQ 80 (435)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEEe
Confidence 69999999999999999998754 47888875321 332222 22244443 32
Q ss_pred eecCCCCchH-H-HhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 617 IDVNNGGSDN-L-SGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lDV~D~~~e~-L-~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
..+.. +.+. + .+++++.|+||+|+-. .....+.+.|...++.+++..
T Consensus 81 ~~v~~-~~~~~~~~~f~~~~DvVi~alDn~~aR~~vn~~C~~~~iPli~~g 130 (435)
T cd01490 81 NRVGP-ETEHIFNDEFWEKLDGVANALDNVDARMYVDRRCVYYRKPLLESG 130 (435)
T ss_pred cccCh-hhhhhhhHHHhcCCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 22321 0111 1 3567889999999843 334568899999999999864
No 466
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=95.50 E-value=0.43 Score=55.75 Aligned_cols=88 Identities=11% Similarity=0.141 Sum_probs=63.3
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.+|.|+|.|+.|+...+.++.+|. ++..||....+. .+..++. + .
T Consensus 139 el~gkTvGIiG~G~IG~~va~~l~afgm----------------~v~~~d~~~~~~--~~~~~~~-~------------~ 187 (324)
T COG0111 139 ELAGKTVGIIGLGRIGRAVAKRLKAFGM----------------KVIGYDPYSPRE--RAGVDGV-V------------G 187 (324)
T ss_pred cccCCEEEEECCCHHHHHHHHHHHhCCC----------------eEEEECCCCchh--hhccccc-e------------e
Confidence 3556899999999999999999999993 456665422221 1111121 1 0
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
-.-.+++++.+|+|+...=-.+.+=.+|..+.+.. ||+|
T Consensus 188 ~~~Ld~lL~~sDiv~lh~PlT~eT~g~i~~~~~a~-MK~g 226 (324)
T COG0111 188 VDSLDELLAEADILTLHLPLTPETRGLINAEELAK-MKPG 226 (324)
T ss_pred cccHHHHHhhCCEEEEcCCCCcchhcccCHHHHhh-CCCC
Confidence 11123578899999998888788889999999999 9999
No 467
>PRK06398 aldose dehydrogenase; Validated
Probab=95.50 E-value=0.035 Score=61.35 Aligned_cols=70 Identities=11% Similarity=0.205 Sum_probs=56.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++. .++..+.+|++| ++.++++++ ..
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~-G~~Vi~~~r~~~~~-------~~~~~~~~D~~~--~~~i~~~~~~~~~~~~~i 73 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEE-GSNVINFDIKEPSY-------NDVDYFKVDVSN--KEQVIKGIDYVISKYGRI 73 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCcccc-------CceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 3458999999 699999999999986 57899999986542 146788999998 777776654 57
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|+||++..
T Consensus 74 d~li~~Ag 81 (258)
T PRK06398 74 DILVNNAG 81 (258)
T ss_pred CEEEECCC
Confidence 99999874
No 468
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=95.48 E-value=0.06 Score=61.67 Aligned_cols=72 Identities=18% Similarity=0.208 Sum_probs=55.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEEcC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVSLL 641 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs~l 641 (1201)
++|||.| +|+||+.++..|.+. +++|+|.|.-.. ..+.+... .++.++.|+.| .+.|++.+++ .|.||...
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~-G~~vvV~DNL~~g~~~~v~~~--~~~f~~gDi~D--~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT-GHEVVVLDNLSNGHKIALLKL--QFKFYEGDLLD--RALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC-CCeEEEEecCCCCCHHHhhhc--cCceEEecccc--HHHHHHHHHhcCCCEEEECc
Confidence 5899998 999999999999985 688998886432 23333221 15788999998 8889998874 79999986
Q ss_pred C
Q psy12817 642 P 642 (1201)
Q Consensus 642 P 642 (1201)
.
T Consensus 76 a 76 (329)
T COG1087 76 A 76 (329)
T ss_pred c
Confidence 4
No 469
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.47 E-value=0.062 Score=58.55 Aligned_cols=75 Identities=13% Similarity=0.127 Sum_probs=55.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-EDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+|.|+|.| +|.+|+.+++.|+++ +.+|++.+|+. +..++..+.. .++.++.+|++| .+++.++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAA-GFDLAINDRPDDEELAATQQELRALGVEVIFFPADVAD--LSAHEAMLDAAQAAW 78 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHhc
Confidence 36788999 799999999999987 57888888753 3333332221 257788999998 777766554
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 79 ~~id~vi~~ag 89 (256)
T PRK12745 79 GRIDCLVNNAG 89 (256)
T ss_pred CCCCEEEECCc
Confidence 5799999974
No 470
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.071 Score=59.46 Aligned_cols=77 Identities=18% Similarity=0.285 Sum_probs=57.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-------HHHHHHHc----CCeeEEEeecCCCCchHHHhhc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-------IDKVTNEF----GRVEATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-------Ae~La~~~----~~v~~v~lDV~D~~~e~L~elI 631 (1201)
++++++|.| +|.+|+.+++.|+++ +.+|++.+|+.+. .+.+++.. .++..+.+|+++ .+.+.+++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~ 81 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARD-GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD--EDQVAAAV 81 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHH
Confidence 357899999 699999999999987 5789999987542 22222221 246778899998 77777666
Q ss_pred c-------CCcEEEEcCCC
Q psy12817 632 R-------SADLVVSLLPY 643 (1201)
Q Consensus 632 ~-------~~DVVIs~lP~ 643 (1201)
+ ..|+||++...
T Consensus 82 ~~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 82 AKAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHHhCCCCEEEECCCC
Confidence 5 57999999854
No 471
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.46 E-value=0.035 Score=65.58 Aligned_cols=84 Identities=15% Similarity=0.202 Sum_probs=59.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC------CCeEEEEeCCHH-----HHHHHHHHc------CCeeE-EEeecCCCCchH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE------NIHITLGSLLKE-----DIDKVTNEF------GRVEA-TLIDVNNGGSDN 626 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~------~~~VtVadR~~e-----kAe~La~~~------~~v~~-v~lDV~D~~~e~ 626 (1201)
.+||.|||+|..|.+++..|+++. +.+|.+..|+++ .++.+.... |+++. -.+.++ .+
T Consensus 11 ~~ki~ViGaG~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~t----sd 86 (365)
T PTZ00345 11 PLKVSVIGSGNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAV----SD 86 (365)
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEe----cC
Confidence 479999999999999999999874 267999999876 355555433 22211 011122 24
Q ss_pred HHhhccCCcEEEEcCCCcccHHHHHH
Q psy12817 627 LSGLVRSADLVVSLLPYNLHHHVAEF 652 (1201)
Q Consensus 627 L~elI~~~DVVIs~lP~~~h~~Vaka 652 (1201)
+.++++++|+||.++|.+....+++.
T Consensus 87 l~eav~~aDiIvlAVPsq~l~~vl~~ 112 (365)
T PTZ00345 87 LKEAVEDADLLIFVIPHQFLESVLSQ 112 (365)
T ss_pred HHHHHhcCCEEEEEcChHHHHHHHHH
Confidence 67788999999999998776666554
No 472
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.45 E-value=0.053 Score=60.99 Aligned_cols=77 Identities=13% Similarity=0.321 Sum_probs=57.7
Q ss_pred CCCeEEEEcC---chhHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLGA---GYVSRPLIEYLHRDENIHITLGSLLK---EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILGA---G~VG~~va~~La~~~~~~VtVadR~~---ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|.++|.|+ +.+|+.+++.|++. +.+|++++|+. ++++++.+.++....+.+|++| .++++++++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQ-GAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 3579999996 58999999999986 57898999985 3455555554322568899998 777766553
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 81 ~g~iDilVnnAG~ 93 (274)
T PRK08415 81 LGKIDFIVHSVAF 93 (274)
T ss_pred cCCCCEEEECCcc
Confidence 46999999753
No 473
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=95.45 E-value=0.074 Score=65.30 Aligned_cols=97 Identities=16% Similarity=0.204 Sum_probs=68.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCC-C-----------Cc------hH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNN-G-----------GS------DN 626 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D-~-----------~~------e~ 626 (1201)
..||+|+|+|.+|..++..+...+ ..|+++|++.++.+... .+ +.+.+.+|..+ + ++ +.
T Consensus 164 ~akVlViGaG~iGl~Aa~~ak~lG-A~V~v~d~~~~rle~a~-~l-Ga~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 164 PAKVLVIGAGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQVQ-SM-GAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHH-Hc-CCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 479999999999999999988874 57999999998766544 45 45665555311 0 00 11
Q ss_pred HHhhccCCcEEEEcC-----CCc-ccHHHHHHHHHcCCeEEEcc
Q psy12817 627 LSGLVRSADLVVSLL-----PYN-LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 627 L~elI~~~DVVIs~l-----P~~-~h~~VakacIeaGkh~VD~S 664 (1201)
+.+.++++|+||+++ |.. +-.+-+...++.|.-+||++
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA 284 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLA 284 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEee
Confidence 556678899999998 332 22233356678888899985
No 474
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=95.45 E-value=0.061 Score=57.99 Aligned_cols=76 Identities=13% Similarity=0.190 Sum_probs=56.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+++|+|.| +|.+|+.+++.|.+. +.+|.+.+|+.+ .++++.... .++..+.+|+.| .+.+.++++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLND-GYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD--TEECAEALAEIEEEE 78 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 46889999 799999999999987 478988888843 333333322 247788899998 777766654
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~~id~vi~~ag~ 90 (245)
T PRK12824 79 GPVDILVNNAGI 90 (245)
T ss_pred CCCCEEEECCCC
Confidence 47999999854
No 475
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.44 E-value=0.067 Score=57.43 Aligned_cols=77 Identities=19% Similarity=0.305 Sum_probs=55.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
++++|+|.| +|++|+.+++.|++. +.+|++..|+.. ..+.+...+ .++..+..|+.| .+.+.++++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQ-GANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 457999999 799999999999986 578877766544 333333322 246677789998 777766554
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 57999999753
No 476
>KOG2017|consensus
Probab=95.44 E-value=0.032 Score=64.38 Aligned_cols=104 Identities=19% Similarity=0.260 Sum_probs=69.7
Q ss_pred cccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-------------------HHHHHHHHc----CCeeEE
Q psy12817 559 DIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-------------------DIDKVTNEF----GRVEAT 615 (1201)
Q Consensus 559 ~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-------------------kAe~La~~~----~~v~~v 615 (1201)
+..+.+..+|+|+|||..|.+++.||+..+--++-++|.+.- |++..++.. +.++..
T Consensus 60 GQ~~Lk~s~VLVVGaGGLGcPa~~YLaaaGvG~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lNs~v~v~ 139 (427)
T KOG2017|consen 60 GQLSLKNSSVLVVGAGGLGCPAAQYLAAAGVGRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLNSHVEVQ 139 (427)
T ss_pred cccccCCccEEEEccCCCCCHHHHHHHHcCCCeecccccceeehhhHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCceee
Confidence 334567789999999999999999999875445555554321 222222211 333322
Q ss_pred Eee-cCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEcc
Q psy12817 616 LID-VNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 616 ~lD-V~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~S 664 (1201)
.-. ..+ .+...+++++.|+|.+|+-.. ..+.+-..|.-.|+.+|..|
T Consensus 140 ~y~~~L~--~sNa~~Ii~~YdvVlDCTDN~~TRYLisD~CVlLgkpLVSgS 188 (427)
T KOG2017|consen 140 TYNEFLS--SSNAFDIIKQYDVVLDCTDNVPTRYLISDVCVLLGKPLVSGS 188 (427)
T ss_pred echhhcc--chhHHHHhhccceEEEcCCCccchhhhhhHHHHcCCcccccc
Confidence 111 122 456778899999999999443 34678889999999998865
No 477
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=95.43 E-value=0.078 Score=60.76 Aligned_cols=111 Identities=15% Similarity=0.186 Sum_probs=77.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs 639 (1201)
+..||+|.| .|..|+.+.+.|...+ +. .++.-++.+ .++ ..+++. ...+.++-.. .|++|.
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~g-~~-~v~~V~p~~~~~~----v~G~~~---------y~sv~dlp~~~~~Dlavi 69 (286)
T TIGR01019 5 KDTKVIVQGITGSQGSFHTEQMLAYG-TN-IVGGVTPGKGGTT----VLGLPV---------FDSVKEAVEETGANASVI 69 (286)
T ss_pred CCCcEEEecCCcHHHHHHHHHHHhCC-CC-EEEEECCCCCcce----ecCeec---------cCCHHHHhhccCCCEEEE
Confidence 357999999 8999999999997764 44 455555542 111 112222 2245555444 799999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEE-c-c-CChHHHHHHHHHHHHcCCEEE--eccc
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVT-A-S-YLSPEMMALHERAASAGITVL--NEVG 689 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD-~-S-yvs~e~~eLde~AkeAGVtil--~e~G 689 (1201)
++|...-+++++.|.+.|+..+- . + +-....++|.+.|+++|+.++ |.+|
T Consensus 70 ~vpa~~v~~~l~e~~~~Gvk~avIis~Gf~e~~~~~l~~~a~~~girilGPNc~G 124 (286)
T TIGR01019 70 FVPAPFAADAIFEAIDAGIELIVCITEGIPVHDMLKVKRYMEESGTRLIGPNCPG 124 (286)
T ss_pred ecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEECCCCce
Confidence 99999889999999999986433 2 3 333335789899999999998 4455
No 478
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.43 E-value=0.08 Score=64.44 Aligned_cols=92 Identities=18% Similarity=0.150 Sum_probs=61.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
...++||+|+|+|.+|++++++|.+.+ .+|++.|++.....++.... +++.... .+ . .+.+.++|+||-.-
T Consensus 12 ~~~~~~v~v~G~G~sG~a~a~~L~~~G-~~V~~~D~~~~~~~~~l~~~-gi~~~~~--~~--~---~~~~~~~d~vV~Sp 82 (473)
T PRK00141 12 QELSGRVLVAGAGVSGRGIAAMLSELG-CDVVVADDNETARHKLIEVT-GVADIST--AE--A---SDQLDSFSLVVTSP 82 (473)
T ss_pred cccCCeEEEEccCHHHHHHHHHHHHCC-CEEEEECCChHHHHHHHHhc-CcEEEeC--CC--c---hhHhcCCCEEEeCC
Confidence 456789999999999999999999875 59999999876655544433 4543221 11 1 12345788887653
Q ss_pred CCcccHHHHHHHHHcCCeEEE
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD 662 (1201)
......+..++|.+.|+.++.
T Consensus 83 gi~~~~p~~~~a~~~gi~v~~ 103 (473)
T PRK00141 83 GWRPDSPLLVDAQSQGLEVIG 103 (473)
T ss_pred CCCCCCHHHHHHHHCCCceee
Confidence 222333556677888988875
No 479
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.42 E-value=0.055 Score=59.64 Aligned_cols=77 Identities=10% Similarity=0.261 Sum_probs=57.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEe-CCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGS-LLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVad-R~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
.+.|+|+|.| ++.+|+.+++.|++. +.+|++++ ++.++++.+++.. .++.++.+|++| .++++++++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~ 82 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQS-GVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE--PETYKELFKKID 82 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHH
Confidence 4568999999 699999999999986 56777765 5666665554332 246788999998 777766654
Q ss_pred ----CCcEEEEcCC
Q psy12817 633 ----SADLVVSLLP 642 (1201)
Q Consensus 633 ----~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 83 ~~~g~id~lv~nAg 96 (260)
T PRK08416 83 EDFDRVDFFISNAI 96 (260)
T ss_pred HhcCCccEEEECcc
Confidence 4799999874
No 480
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.41 E-value=0.054 Score=60.69 Aligned_cols=76 Identities=14% Similarity=0.278 Sum_probs=58.4
Q ss_pred CCeEEEEcC---chhHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLGA---GYVSRPLIEYLHRDENIHITLGSLLK---EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILGA---G~VG~~va~~La~~~~~~VtVadR~~---ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.|.++|.|+ +.+|+.+++.|++. +.+|++.+|+. ++++++.+.++....+.+|++| .++++++++
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~-G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAA-GAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD--EASIDAVFETLEKKW 86 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC--HHHHHHHHHHHHHhc
Confidence 478999996 58999999999986 57888888763 5566666665445678899998 777776653
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 87 g~iD~lv~nAG~ 98 (272)
T PRK08159 87 GKLDFVVHAIGF 98 (272)
T ss_pred CCCcEEEECCcc
Confidence 37999999753
No 481
>PLN02775 Probable dihydrodipicolinate reductase
Probab=95.38 E-value=0.15 Score=58.45 Aligned_cols=125 Identities=13% Similarity=0.115 Sum_probs=78.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEE-EeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-----cCCc-
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITL-GSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-----RSAD- 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtV-adR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-----~~~D- 635 (1201)
+..||+|.| .|+||+.+++.+.+ .+++++- .++.+. .+.+.-.+.+.. + -+.. ++++.+.+ +.+|
T Consensus 10 ~~i~V~V~Ga~G~MG~~~~~av~~-~~~~Lv~~~~~~~~-~~~~~~~~~g~~-v--~~~~--~~dl~~~l~~~~~~~~~~ 82 (286)
T PLN02775 10 SAIPIMVNGCTGKMGHAVAEAAVS-AGLQLVPVSFTGPA-GVGVTVEVCGVE-V--RLVG--PSEREAVLSSVKAEYPNL 82 (286)
T ss_pred CCCeEEEECCCChHHHHHHHHHhc-CCCEEEEEeccccc-cccccceeccce-e--eeec--CccHHHHHHHhhccCCCE
Confidence 347999999 69999999999998 7888553 444332 111110111221 1 1221 12344444 2489
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHH
Q psy12817 636 LVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLL 698 (1201)
Q Consensus 636 VVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhml 698 (1201)
|||+-+-+..-...++.|+++|+++|.-+ +..++ +.+.++++++.++..--|.-|+.-|+
T Consensus 83 VvIDFT~P~a~~~~~~~~~~~g~~~VvGTTG~~~e~---l~~~~~~~~i~vv~apNfSiGv~ll~ 144 (286)
T PLN02775 83 IVVDYTLPDAVNDNAELYCKNGLPFVMGTTGGDRDR---LLKDVEESGVYAVIAPQMGKQVVAFQ 144 (286)
T ss_pred EEEECCChHHHHHHHHHHHHCCCCEEEECCCCCHHH---HHHHHhcCCccEEEECcccHHHHHHH
Confidence 89999855666788999999999988753 44443 33445567887777666666765444
No 482
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.37 E-value=0.063 Score=61.21 Aligned_cols=78 Identities=19% Similarity=0.190 Sum_probs=58.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.++++|.| +|.+|+.+++.|++. +.+|++.++. .++++++++.. .++..+.+|+.| .+.+.++++
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~-Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d--~~~~~~~~~~~~~ 86 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARL-GATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ--RATADELVATAVG 86 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHH
Confidence 4568999999 689999999999987 5688888874 34455544432 246678899998 777777664
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 87 ~g~iD~li~nAG~ 99 (306)
T PRK07792 87 LGGLDIVVNNAGI 99 (306)
T ss_pred hCCCCEEEECCCC
Confidence 47999999753
No 483
>COG0476 ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism]
Probab=95.36 E-value=0.096 Score=58.50 Aligned_cols=99 Identities=20% Similarity=0.273 Sum_probs=69.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-------------------HHHH----HHHHcCCeeEE--Ee
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-------------------DIDK----VTNEFGRVEAT--LI 617 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-------------------kAe~----La~~~~~v~~v--~l 617 (1201)
.+.-||+|+|+|..|.+++.+|+..+.-+++++|.+.- +++. +.+..|.+... ..
T Consensus 28 l~~s~vlvvG~GglG~~~~~~la~aGvg~l~i~D~d~v~~snL~rq~~~~~~dig~~Ka~~a~~~l~~ln~~v~v~~~~~ 107 (254)
T COG0476 28 LKDSRVLVVGAGGLGSPAAKYLALAGVGKLTIVDFDTVELSNLQRQFLFTEADVGKPKAEVAAKALRKLNPLVEVVAYLE 107 (254)
T ss_pred HhhCCEEEEecChhHHHHHHHHHHcCCCeEEEEcCCcccccccCceeeecccccCCcHHHHHHHHHHHhCCCCeEEEeec
Confidence 44579999999999999999999887666887775432 2222 22222444332 22
Q ss_pred ecCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 618 DVNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 618 DV~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
.+. .+...+++++.|+|++|+-. .....+-.+|.+.++.+++.+
T Consensus 108 ~l~---~~~~~~~~~~~d~v~d~~dn~~~r~~iN~~~~~~~~pli~~~ 152 (254)
T COG0476 108 RLD---EENAEELIAQFDVVLDCTDNFETRYLINDACVKLGIPLVHGG 152 (254)
T ss_pred ccC---hhhHHHHhccCCEEEECCCCHHHHHHHHHHHHHhCCCeEeee
Confidence 232 44567889999999999854 345678889999999988864
No 484
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.36 E-value=0.02 Score=66.24 Aligned_cols=68 Identities=19% Similarity=0.299 Sum_probs=51.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|.|.||+.+++.|... +.+|.+.+++.++.. ++... .. .+++.++++++|+|+.++|
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~af-G~~V~~~~~~~~~~~-------~~~~~----~~--~~~l~e~l~~aDvvv~~lP 199 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTW-GFPLRCWSRSRKSWP-------GVQSF----AG--REELSAFLSQTRVLINLLP 199 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCCCCC-------Cceee----cc--cccHHHHHhcCCEEEECCC
Confidence 3458999999999999999999875 678999998754321 11111 11 3468999999999999999
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 200 lt 201 (312)
T PRK15469 200 NT 201 (312)
T ss_pred CC
Confidence 64
No 485
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.11 Score=65.17 Aligned_cols=76 Identities=18% Similarity=0.324 Sum_probs=55.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHh-CCCCeEEEEeCCHH--HHHHHHHHc--CCeeEEEeecCCCC----chHHHhhccCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHR-DENIHITLGSLLKE--DIDKVTNEF--GRVEATLIDVNNGG----SDNLSGLVRSAD 635 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~-~~~~~VtVadR~~e--kAe~La~~~--~~v~~v~lDV~D~~----~e~L~elI~~~D 635 (1201)
|+|+|.| +|++|+.+++.|.+ ..+.+|++.+|+.. +.+.+...+ ++++.+..|+.|.+ .+.++++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 4899999 79999999999985 34678999999643 333333322 46788888988610 1345555 8999
Q ss_pred EEEEcCC
Q psy12817 636 LVVSLLP 642 (1201)
Q Consensus 636 VVIs~lP 642 (1201)
+||+|..
T Consensus 80 ~Vih~Aa 86 (657)
T PRK07201 80 HVVHLAA 86 (657)
T ss_pred EEEECce
Confidence 9999984
No 486
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=95.34 E-value=0.038 Score=67.84 Aligned_cols=77 Identities=17% Similarity=0.220 Sum_probs=52.7
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---------CC-eeE-------EEeecCCCCchH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---------GR-VEA-------TLIDVNNGGSDN 626 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---------~~-v~~-------v~lDV~D~~~e~ 626 (1201)
..+||.|||+|.||+.++..+++. +++|++.|++++++++..+.. .+ ... -.+...+ +
T Consensus 4 ~~~kV~VIGaG~MG~gIA~~la~a-G~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~----~ 78 (503)
T TIGR02279 4 NVVTVAVIGAGAMGAGIAQVAASA-GHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVT----D 78 (503)
T ss_pred CccEEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeC----C
Confidence 357899999999999999999876 689999999999886532110 01 000 0011111 2
Q ss_pred HHhhccCCcEEEEcCCCccc
Q psy12817 627 LSGLVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 627 L~elI~~~DVVIs~lP~~~h 646 (1201)
+++ ++++|+||.|+|-...
T Consensus 79 ~~~-l~~aDlVIEav~E~~~ 97 (503)
T TIGR02279 79 LHA-LADAGLVIEAIVENLE 97 (503)
T ss_pred HHH-hCCCCEEEEcCcCcHH
Confidence 433 4699999999997553
No 487
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.31 E-value=0.053 Score=58.91 Aligned_cols=72 Identities=13% Similarity=0.110 Sum_probs=56.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC-------Cc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS-------AD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~-------~D 635 (1201)
..++++|.| +|.+|+.+++.|++. +.+|++.+|+. . .....++..+.+|+.| .+.+.+++++ .|
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~-G~~v~~~~~~~--~---~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 78 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEA-GAKVIGFDQAF--L---TQEDYPFATFVLDVSD--AAAVAQVCQRLLAETGPLD 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecch--h---hhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 457899999 689999999999986 57899999986 1 1112257788999998 7788777654 79
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 79 ~vi~~ag~ 86 (252)
T PRK08220 79 VLVNAAGI 86 (252)
T ss_pred EEEECCCc
Confidence 99999743
No 488
>TIGR03450 mycothiol_INO1 inositol 1-phosphate synthase, Actinobacterial type. This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.
Probab=95.30 E-value=0.16 Score=59.17 Aligned_cols=157 Identities=15% Similarity=0.217 Sum_probs=90.9
Q ss_pred CeEEEEcCchhHHHHHHHHH---hCC-------------------CCeE-EEEeCCHHHH----HHHHHHcCCeeEEEee
Q psy12817 566 RNVLLLGAGYVSRPLIEYLH---RDE-------------------NIHI-TLGSLLKEDI----DKVTNEFGRVEATLID 618 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La---~~~-------------------~~~V-tVadR~~ekA----e~La~~~~~v~~v~lD 618 (1201)
.||+|+|-|..++.+++-+. +.. ++++ ...|-+..+. .+..-..||++....|
T Consensus 1 irvai~GvGncaSslvqGieyyk~~~~~~~~~Glm~~~~g~y~~~DIe~vaafDVd~~KVGkdlseai~~~pN~t~~~~~ 80 (351)
T TIGR03450 1 VRVAIVGVGNCASSLVQGVEYYYNADPTSTVPGLMHVQFGPYHVGDVEFVAAFDVDAKKVGFDLSDAIFASENNTIKIAD 80 (351)
T ss_pred CeEEEEeccHHHHHHHHHHHHHHhCCCccCcCCccccccCCcCccceEEEEEEeccccccCccHHHHHhcCCCCceeeec
Confidence 38999999999999987543 210 1232 2345444433 1222233565555444
Q ss_pred cC------------CC--------------CchHHHhhcc--CCcEEEEcCCCccc---HHHHHHHHHcCCeEEEccC-C
Q psy12817 619 VN------------NG--------------GSDNLSGLVR--SADLVVSLLPYNLH---HHVAEFCIQHGKNLVTASY-L 666 (1201)
Q Consensus 619 V~------------D~--------------~~e~L~elI~--~~DVVIs~lP~~~h---~~VakacIeaGkh~VD~Sy-v 666 (1201)
+- || ..+++.+.++ ++||+||.+|.... .-.|.+|+++|+.+|.... .
T Consensus 81 vp~~~v~V~~G~~lDg~~~~~~~~~~~~~~~~~dv~~~lk~~~~dVlvnylPvGs~~A~~~YA~AAl~aG~afVN~~P~~ 160 (351)
T TIGR03450 81 VPPTGVTVQRGPTLDGLGKYYRDTIEESDAEPVDVVQALKDAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVF 160 (351)
T ss_pred cCCCCCEEeecccccchhhHhhccccccccCHHHHHHHHHhcCCCEEEECCccchHHHHHHHHHHHHHcCCceEeccCcc
Confidence 22 10 1223444454 59999999997542 4568999999999999864 1
Q ss_pred hHHHHHHHHHHHHcCCEEEeccccC-chhHHHHHHHHHHHhhhcCCcEEEEEee-cCCC
Q psy12817 667 SPEMMALHERAASAGITVLNEVGLD-PGIDHLLAMECIDAAHLNGGKVESFVSY-CGGL 723 (1201)
Q Consensus 667 s~e~~eLde~AkeAGVtil~e~GlD-PGIdhmlA~~~idei~~~ggkV~sf~s~-cGGL 723 (1201)
.....++.+.++++|+.++..=+-. -|-+ ++-.-+.+-+.++|-++++..++ .||-
T Consensus 161 ia~~p~~a~~f~e~glPi~GDD~Ksq~GaT-i~h~vLa~lf~~Rgl~v~~~yq~NigGN 218 (351)
T TIGR03450 161 IASDPEWAKKFTDAGVPIVGDDIKSQVGAT-ITHRVLAKLFEDRGVRLDRTMQLNVGGN 218 (351)
T ss_pred ccCCHHHHHHHHHCCCCEecccccccCCCc-hHHHHHHHHHHHcCCceeeEEEEeecCc
Confidence 2244567778999999987421110 1211 11122334455677788776554 3553
No 489
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.30 E-value=0.083 Score=58.12 Aligned_cols=77 Identities=8% Similarity=0.144 Sum_probs=57.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++++|+.. ++.+..+.. .++..+.+|++| .+++.++++ .
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKA-GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence 458899999 799999999999986 678888888643 222222222 246788999998 777777765 4
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|++|++...
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 7999999753
No 490
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.30 E-value=0.059 Score=68.48 Aligned_cols=78 Identities=26% Similarity=0.349 Sum_probs=62.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
...++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++.+...+ + .+..+.+|++| .+++.++++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~-Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd--~~~v~~a~~~i~ 488 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD--EQAVKAAFADVA 488 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC--HHHHHHHHHHHH
Confidence 3468999999 699999999999986 579999999998877665442 1 35678899998 778877765
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 489 ~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 489 LAYGGVDIVVNNAGI 503 (676)
T ss_pred HhcCCCcEEEECCCC
Confidence 57999999853
No 491
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.29 E-value=0.061 Score=60.24 Aligned_cols=77 Identities=12% Similarity=0.228 Sum_probs=56.2
Q ss_pred CCCeEEEEcCc---hhHHHHHHHHHhCCCCeEEEEeCCHHH---HHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLGAG---YVSRPLIEYLHRDENIHITLGSLLKED---IDKVTNEFGRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILGAG---~VG~~va~~La~~~~~~VtVadR~~ek---Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|.++|.|++ .+|+.+++.|++. +.+|++++|+.+. ++++.+..+....+.+|++| .++++++++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~ 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQ-GAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhC-CCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence 34789999965 7999999999986 5789888987643 33443333333467899998 777766653
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 83 ~g~iD~lVnnAG~ 95 (271)
T PRK06505 83 WGKLDFVVHAIGF 95 (271)
T ss_pred hCCCCEEEECCcc
Confidence 47999999753
No 492
>PRK12743 oxidoreductase; Provisional
Probab=95.28 E-value=0.069 Score=58.68 Aligned_cols=76 Identities=12% Similarity=0.139 Sum_probs=56.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|.++ .++.++++++.+.. .++..+.+|++| .+.+++++.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQ-GFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 57899999 699999999999987 5777766 45666665555432 247788899998 777666554
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~~id~li~~ag~ 90 (256)
T PRK12743 79 GRIDVLVNNAGA 90 (256)
T ss_pred CCCCEEEECCCC
Confidence 47999999753
No 493
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=95.27 E-value=0.071 Score=63.13 Aligned_cols=78 Identities=18% Similarity=0.266 Sum_probs=57.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.+++|+||| +|.||+.++..|.+. +++|++.||+.. +...++++++|+||.|+|
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~-G~~V~~~d~~~~------------------------~~~~~~~~~aDlVilavP 151 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLS-GYQVRILEQDDW------------------------DRAEDILADAGMVIVSVP 151 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHC-CCeEEEeCCCcc------------------------hhHHHHHhcCCEEEEeCc
Confidence 468999999 999999999999986 478999998520 123455678999999999
Q ss_pred CcccHHHHHHH--HHcCCeEEEccCC
Q psy12817 643 YNLHHHVAEFC--IQHGKNLVTASYL 666 (1201)
Q Consensus 643 ~~~h~~Vakac--IeaGkh~VD~Syv 666 (1201)
......+++.. +..|+-++|.+-+
T Consensus 152 ~~~~~~~~~~l~~l~~~~iv~Dv~Sv 177 (374)
T PRK11199 152 IHLTEEVIARLPPLPEDCILVDLTSV 177 (374)
T ss_pred HHHHHHHHHHHhCCCCCcEEEECCCc
Confidence 76555544432 2445667777544
No 494
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=95.26 E-value=0.055 Score=65.08 Aligned_cols=89 Identities=17% Similarity=0.136 Sum_probs=57.6
Q ss_pred CeEEEEcCchhHHHHHH--HHH---hCCCCeEEEEeCCHHHHHHHHHHcC----Ce-eEEEeecCCCCchHHHhhccCCc
Q psy12817 566 RNVLLLGAGYVSRPLIE--YLH---RDENIHITLGSLLKEDIDKVTNEFG----RV-EATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~--~La---~~~~~~VtVadR~~ekAe~La~~~~----~v-~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
+||.|||+|.+|...+- .++ ...+.+|++.|+++++++....... .. ....+.++. ++.+.++++|
T Consensus 1 ~KIaIIGaGs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~~tt----D~~eal~~AD 76 (423)
T cd05297 1 IKIAFIGAGSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIEATT----DRREALDGAD 76 (423)
T ss_pred CeEEEECCChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEEEeC----CHHHHhcCCC
Confidence 48999999999987443 454 3445689999999998876554321 11 012233332 5778889999
Q ss_pred EEEEcCCCcccHHHHH---HHHHcCC
Q psy12817 636 LVVSLLPYNLHHHVAE---FCIQHGK 658 (1201)
Q Consensus 636 VVIs~lP~~~h~~Vak---acIeaGk 658 (1201)
+||+++|...+....+ .+++.|.
T Consensus 77 ~Vi~ai~~~~~~~~~~de~i~~K~g~ 102 (423)
T cd05297 77 FVINTIQVGGHEYTETDFEIPEKYGY 102 (423)
T ss_pred EEEEeeEecCccchhhhhhhHHHcCe
Confidence 9999998654433333 3444444
No 495
>PRK07069 short chain dehydrogenase; Validated
Probab=95.26 E-value=0.05 Score=58.94 Aligned_cols=73 Identities=16% Similarity=0.269 Sum_probs=55.6
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHcC------CeeEEEeecCCCCchHHHhhcc------
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNEFG------RVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~~~------~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+|+|.| +|.+|+.+++.|+++ +.+|++.+|+ .++++++.+.+. .+..+..|+.| .+.+.++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ-GAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD--EAQWQALLAQAADAM 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence 489999 799999999999986 5799999998 666666654431 12346789998 777766654
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 78 ~~id~vi~~ag 88 (251)
T PRK07069 78 GGLSVLVNNAG 88 (251)
T ss_pred CCccEEEECCC
Confidence 4699999974
No 496
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=95.26 E-value=0.14 Score=63.02 Aligned_cols=100 Identities=14% Similarity=0.138 Sum_probs=67.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-----------ch------
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-----------SD------ 625 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-----------~e------ 625 (1201)
....||+|+|+|.+|..++..+...+ .+|++.|+++++.+.. +.+ +.+.+.+|..+.+ .+
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lG-A~V~a~D~~~~rle~a-esl-GA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLG-AIVRAFDTRPEVAEQV-ESM-GAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHH-HHc-CCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 34689999999999999999888775 4899999999987754 445 5665555442200 01
Q ss_pred -HHHhhccCCcEEEEcCCC--cccH----HHHHHHHHcCCeEEEccC
Q psy12817 626 -NLSGLVRSADLVVSLLPY--NLHH----HVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 626 -~L~elI~~~DVVIs~lP~--~~h~----~VakacIeaGkh~VD~Sy 665 (1201)
.+.+.++++|+||+|+.. .-++ +-+-.+++.|-.++|.+.
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~ 286 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAA 286 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEcc
Confidence 112334679999999843 2223 233445567777888764
No 497
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=95.24 E-value=1.4 Score=54.69 Aligned_cols=100 Identities=13% Similarity=0.100 Sum_probs=70.3
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.++.|+|.|+.|+...+.++.+|+ .+.+|+..... +... ..|. .+.
T Consensus 135 ~l~gktvgIiG~G~IG~~vA~~l~~fG~----------------~V~~~d~~~~~-~~~~-~~g~------------~~~ 184 (525)
T TIGR01327 135 ELYGKTLGVIGLGRIGSIVAKRAKAFGM----------------KVLAYDPYISP-ERAE-QLGV------------ELV 184 (525)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCC----------------EEEEECCCCCh-hHHH-hcCC------------EEc
Confidence 3556899999999999999999999984 34555532211 1111 1121 111
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCe
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSI 343 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsi 343 (1201)
..+ +++++.+|+|+.+.-..+.+-.+|..+.++. |||| ++++++| .|+-+
T Consensus 185 ~~l-~ell~~aDvV~l~lPlt~~T~~li~~~~l~~-mk~g------------------a~lIN~a--RG~~v 234 (525)
T TIGR01327 185 DDL-DELLARADFITVHTPLTPETRGLIGAEELAK-MKKG------------------VIIVNCA--RGGII 234 (525)
T ss_pred CCH-HHHHhhCCEEEEccCCChhhccCcCHHHHhc-CCCC------------------eEEEEcC--CCcee
Confidence 112 3567889999999998888888999999998 9999 8898876 45533
No 498
>PLN02358 glyceraldehyde-3-phosphate dehydrogenase
Probab=95.24 E-value=0.1 Score=61.18 Aligned_cols=101 Identities=14% Similarity=0.165 Sum_probs=64.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEE-EeCC--HHHHHHHHH------HcCC--eeE-----EEee-----cCC-C
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITL-GSLL--KEDIDKVTN------EFGR--VEA-----TLID-----VNN-G 622 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtV-adR~--~ekAe~La~------~~~~--v~~-----v~lD-----V~D-~ 622 (1201)
+.||+|+|+|++|+.+++.+.+.++++++. .|.+ .+...-|.+ .+++ ++. +.++ +.. .
T Consensus 5 ~lrVaI~G~GrIGr~~~r~~~~~~~velvaI~D~~~~~~~~a~ll~yDs~~g~~~~~~v~~~~g~~l~~~g~~i~v~~~~ 84 (338)
T PLN02358 5 KIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGIR 84 (338)
T ss_pred ceEEEEEeecHHHHHHHHHHhhCCCcEEEEEeCCCCCHHHHHHhheeecCCCCcCCCeEEECCCCEEEECCEEEEEEEcC
Confidence 579999999999999999988878888554 5543 333222221 1121 111 1100 111 0
Q ss_pred CchHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 623 GSDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 623 ~~e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+++.+.=--.++|+|+.|++.....+.+...+++|+..|+.|-
T Consensus 85 ~p~~~~w~~~gvDiVie~tG~~~s~~~a~~hl~aGak~ViiSa 127 (338)
T PLN02358 85 NPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISA 127 (338)
T ss_pred CcccCcccccCCCEEEEcccchhhHHHHHHHHHCCCEEEEeCC
Confidence 0222210013799999999988889999999999999999873
No 499
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.23 E-value=0.05 Score=60.24 Aligned_cols=77 Identities=14% Similarity=0.286 Sum_probs=56.1
Q ss_pred CCCeEEEEcC---chhHHHHHHHHHhCCCCeEEEEeC------CHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--
Q psy12817 564 ESRNVLLLGA---GYVSRPLIEYLHRDENIHITLGSL------LKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 564 ~mkKVLILGA---G~VG~~va~~La~~~~~~VtVadR------~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
+.|.++|.|+ +.+|+.+++.|++. +.+|++..| ..+.++++.+....+.++.+|++| .++++++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~ 81 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAA-GAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD--DAQIEETFETI 81 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC--HHHHHHHHHHH
Confidence 4578999996 48999999999986 568877754 334455554433345678899998 777776653
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 82 ~~~~g~iD~lv~nag~ 97 (258)
T PRK07370 82 KQKWGKLDILVHCLAF 97 (258)
T ss_pred HHHcCCCCEEEEcccc
Confidence 47999999853
No 500
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=95.18 E-value=0.053 Score=65.27 Aligned_cols=82 Identities=13% Similarity=0.288 Sum_probs=58.1
Q ss_pred CCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccch
Q psy12817 194 GPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSL 273 (1201)
Q Consensus 194 ~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~ 273 (1201)
.-.+|+|+|.|.+|++.+..|+.+| ++|.+++....+..... ..| |... +
T Consensus 211 ~Gk~VlViG~G~IG~~vA~~lr~~G----------------a~ViV~d~dp~ra~~A~-~~G--~~v~----------~- 260 (425)
T PRK05476 211 AGKVVVVAGYGDVGKGCAQRLRGLG----------------ARVIVTEVDPICALQAA-MDG--FRVM----------T- 260 (425)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC----------------CEEEEEcCCchhhHHHH-hcC--CEec----------C-
Confidence 3468999999999999999999999 45667766544432222 123 2211 0
Q ss_pred hhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 274 FASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 274 f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
. ++.++.+|++|+|. ..+.+|+.++++. ||+|
T Consensus 261 l-~eal~~aDVVI~aT----G~~~vI~~~~~~~-mK~G 292 (425)
T PRK05476 261 M-EEAAELGDIFVTAT----GNKDVITAEHMEA-MKDG 292 (425)
T ss_pred H-HHHHhCCCEEEECC----CCHHHHHHHHHhc-CCCC
Confidence 1 23466899999986 4567899999999 9999
Done!