RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12818
(532 letters)
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation,
mutant T356D, lipid binding protein; 2.65A {Homo
sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Length = 672
Score = 323 bits (829), Expect = e-103
Identities = 139/502 (27%), Positives = 235/502 (46%), Gaps = 57/502 (11%)
Query: 45 IAYYTKQLYRSMRG-PGTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETE 103
+ + LY + GTD+A + IL +RS+ L + E+ + + ++++I
Sbjct: 176 VQQDVQDLYEAGELKWGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRG---- 231
Query: 104 HRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVI 163
++G ++ ++ + L AMKGLGT + +
Sbjct: 232 ------------ELSGDFEKLMLAV----VKCIRSTPEY--FAERLFKAMKGLGTRDNTL 273
Query: 164 RQILTRRTNKQRLEI-LEYV------------------FRKC---------NRNPFGPQS 195
+I+ R+ L+I + ++K +
Sbjct: 274 IRIMVSRSELDMLDIREIFRTKYEKSLYSMIKNDTSGEYKKTLLKLSGGDDDAAGQFFPE 333
Query: 196 SSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRR 255
++ V + + + +R ND FN D +ALR AMKGLGT+E I I+T R
Sbjct: 334 AAQVAYQMWELSAVARVELKGDVRPAND-FNPDADAKALRKAMKGLGTDEDTIIDIITHR 392
Query: 256 TNKQRLEILEKYPIELNRDLLSDLKSELSGDFEDLVKALMKSPVDFMCSEIHRALTGLMF 315
+N QR +I + + RDL++DLKSE+SGD L+ LM P + ++ +A+ G
Sbjct: 393 SNVQRQQIRQTFKSHFGRDLMTDLKSEISGDLARLILGLMMPPAHYDAKQLKKAMEGAGT 452
Query: 316 DANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGDYRRLVTLILTGTRDPPG 375
D L EIL T+TNAEI+ I + Y+ Y + L + T G +RR++ + TG R+ G
Sbjct: 453 DEKALIEILATRTNAEIRAINEAYKEDYHKSLEDALSSDTSGHFRRILISLATGHREEGG 512
Query: 376 K-----VNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFESYKVEKGRT 430
+ + E+ G + E F+ + +SY L VF+ +
Sbjct: 513 ENLDQAREDAQVAAEILEIADTPSGDKTSLETRFMTILCTRSYPHLRRVFQEFIKMTNYD 572
Query: 431 IEQALKAELSGELLDLTLAIVECIHNPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEID 490
+E +K E+SG++ D +AIV+ + N +FA +LY++MKG GTD +TL RI+VSRSEID
Sbjct: 573 VEHTIKKEMSGDVRDAFVAIVQSVKNKPLFFADKLYKSMKGAGTDDKTLTRIMVSRSEID 632
Query: 491 LGNIKKEYERLFNKTLESHVKK 512
L NI++E+ ++K+L ++
Sbjct: 633 LLNIRREFIEKYDKSLHQAIEG 654
Score = 310 bits (796), Expect = 3e-98
Identities = 115/298 (38%), Positives = 189/298 (63%), Gaps = 1/298 (0%)
Query: 215 EPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELNRD 274
+I F+ ++D +AL AMKG G+++ I I+T R+N+QR E+ + Y +D
Sbjct: 10 RGSIH-DFPGFDPNQDAEALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGKD 68
Query: 275 LLSDLKSELSGDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKE 334
L++DLK EL+G FE L+ LM+ P EI A++G+ D L EIL ++TN ++ +
Sbjct: 69 LIADLKYELTGKFERLIVGLMRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQMHQ 128
Query: 335 IVQNYETLYKRPLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGE 394
+V Y+ Y+R L + T G +++++ ++L GTR+ V+ + ++ ++LY AGE
Sbjct: 129 LVAAYKDAYERDLEADIIGDTSGHFQKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEAGE 188
Query: 395 GKLGTDEAEFVKVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVECI 454
K GTDEA+F+ + G++S + L LVF+ Y G+ IE +++ ELSG+ L LA+V+CI
Sbjct: 189 LKWGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAVVKCI 248
Query: 455 HNPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKK 512
+ YFA++L++AMKGLGT TLIRI+VSRSE+D+ +I++ + + K+L S +K
Sbjct: 249 RSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIFRTKYEKSLYSMIKN 306
Score = 244 bits (623), Expect = 5e-73
Identities = 117/502 (23%), Positives = 222/502 (44%), Gaps = 76/502 (15%)
Query: 50 KQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQV 109
+ LY +M+G G+D ++ I+ SRS + + + ++ Y + L + ++ T +
Sbjct: 26 EALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGKDLIADLKYELTGKFERLI 85
Query: 110 RFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTR 169
+ P + D + ++ A+ G+GT+E + +IL
Sbjct: 86 -----VGLMRPPAYC--------------------DAKEIKDAISGIGTDEKCLIEILAS 120
Query: 170 RTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGH------PVHILTFQGEPTIRRTND 223
RTN+Q +++ R + G + ++ QG
Sbjct: 121 RTNEQMHQLVAAYKDAYER--------DLEADIIGDTSGHFQKMLVVLLQGTREEDDVVS 172
Query: 224 PFNASEDVQALRAAMKG-LGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSE 282
+DVQ L A + GT+E IL R+ + + ++Y + + + ++ E
Sbjct: 173 EDLVQQDVQDLYEAGELKWGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGE 232
Query: 283 LSGDFEDLVKALMK---SPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNY 339
LSGDFE L+ A++K S ++ + +A+ GL NTL I+V+++ ++ +I + +
Sbjct: 233 LSGDFEKLMLAVVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIF 292
Query: 340 ETLYKRPLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKEL-------------- 385
T Y++ L + T G+Y++ + + G D G+ PE A+
Sbjct: 293 RTKYEKSLYSMIKNDTSGEYKKTLLKLSGGDDDAAGQFFPEAAQVAYQMWELSAVARVEL 352
Query: 386 ---------------SKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFESYKVEKGRT 430
+K L A +G GTDE + + H+S Q + +++K GR
Sbjct: 353 KGDVRPANDFNPDADAKALRKAMKGL-GTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRD 411
Query: 431 IEQALKAELSGELLDLTLAIVECIHNPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEID 490
+ LK+E+SG+L L L ++ P Y AKQL +AM+G GTD++ LI I+ +R+ +
Sbjct: 412 LMTDLKSEISGDLARLILGLM---MPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAE 468
Query: 491 LGNIKKEYERLFNKTLESHVKK 512
+ I + Y+ ++K+LE +
Sbjct: 469 IRAINEAYKEDYHKSLEDALSS 490
Score = 221 bits (563), Expect = 2e-64
Identities = 109/450 (24%), Positives = 193/450 (42%), Gaps = 56/450 (12%)
Query: 35 KAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLK 94
A V I + Y+ ++L+++M+G GT D TL+RI++SRSE+D+ +I+ F +YE++L
Sbjct: 242 LAVVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIFRTKYEKSLY 301
Query: 95 SAIEVGET-------------EHRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDP-- 139
S I+ +T + +F P + + + L+ ++ P
Sbjct: 302 SMIK-NDTSGEYKKTLLKLSGGDDDAAGQFFPEAAQVAYQMWELSAVARVELKGDVRPAN 360
Query: 140 -FNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSV 198
FN D +ALR AMKGLGT+E I I+T R+N QR +I + R+ S +
Sbjct: 361 DFNPDADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLKSEI 420
Query: 199 VQLFAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNK 258
A + ++ P A D + L+ AM+G GT+E + +IL RTN
Sbjct: 421 SGDLARLILGLMM-----------PP--AHYDAKQLKKAMEGAGTDEKALIEILATRTNA 467
Query: 259 QRLEILEKYPIELNRDLLSDLKSELSGDFEDLVKALMKSP----------------VDFM 302
+ I E Y + ++ L L S+ SG F ++ +L V
Sbjct: 468 EIRAINEAYKEDYHKSLEDALSSDTSGHFRRILISLATGHREEGGENLDQAREDAQVAAE 527
Query: 303 CSEIHRALTG-LMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGDYRR 361
EI +G IL T++ ++ + Q + + + GD R
Sbjct: 528 ILEIADTPSGDKTSLETRFMTILCTRSYPHLRRVFQEFIKMTNYDVEHTIKKEMSGDVRD 587
Query: 362 LVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFE 421
I+ ++ P + +LY + +G GTD+ ++ +S L +
Sbjct: 588 AFVAIVQSVKNKP--------LFFADKLYKSMKGA-GTDDKTLTRIMVSRSEIDLLNIRR 638
Query: 422 SYKVEKGRTIEQALKAELSGELLDLTLAIV 451
+ + +++ QA++ + SG+ L LA+
Sbjct: 639 EFIEKYDKSLHQAIEGDTSGDFLKALLALC 668
Score = 151 bits (383), Expect = 2e-39
Identities = 66/327 (20%), Positives = 138/327 (42%), Gaps = 32/327 (9%)
Query: 50 KQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQV 109
K L ++M+G GTD+ T++ I+ RS + + I++ F+ + R L + ++ +
Sbjct: 369 KALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLK----SEISGDL 424
Query: 110 RFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTR 169
L + + D + L+ AM+G GT+E + +IL
Sbjct: 425 ARLILGLMMPPAHY---------------------DAKQLKKAMEGAGTDEKALIEILAT 463
Query: 170 RTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTF---QGEPTIRRTNDPFN 226
RTN + I E +++ SS F + + T +G + + +
Sbjct: 464 RTNAEIRAINEAYKEDYHKSLEDALSSDTSGHFRRILISLATGHREEGGENLDQAREDAQ 523
Query: 227 ASEDVQALRAAMKG-LGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSG 285
+ ++ + G + ET IL R+ + +++ N D+ +K E+SG
Sbjct: 524 VAAEILEIADTPSGDKTSLETRFMTILCTRSYPHLRRVFQEFIKMTNYDVEHTIKKEMSG 583
Query: 286 DFEDLVKALMK---SPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETL 342
D D A+++ + F ++++++ G D TLT I+V+++ ++ I + +
Sbjct: 584 DVRDAFVAIVQSVKNKPLFFADKLYKSMKGAGTDDKTLTRIMVSRSEIDLLNIRREFIEK 643
Query: 343 YKRPLVEHALDVTKGDYRRLVTLILTG 369
Y + L + T GD+ + + + G
Sbjct: 644 YDKSLHQAIEGDTSGDFLKALLALCGG 670
Score = 110 bits (277), Expect = 8e-26
Identities = 50/267 (18%), Positives = 106/267 (39%), Gaps = 24/267 (8%)
Query: 33 FRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERT 92
+ + + P Y KQL ++M G GTD+ L+ IL +R+ ++ I ++ Y ++
Sbjct: 424 LARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYKEDYHKS 483
Query: 93 LKSAIEVGET--EHRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALR 150
L+ A+ +T RR L S+A +G + + + + ++ +
Sbjct: 484 LEDALS-SDTSGHFRR------ILISLATGHRE----EGGENLDQAREDAQVAAEILEIA 532
Query: 151 AAMKG-LGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHI 209
G + ET IL R+ + + + N + ++ + +G
Sbjct: 533 DTPSGDKTSLETRFMTILCTRSYPHLRRVFQEFIKMTNYD----VEHTIKKEMSGDVRDA 588
Query: 210 LTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPI 269
++ + L +MKG GT++ + +I+ R+ L I ++
Sbjct: 589 FVA----IVQSVKNKPLF--FADKLYKSMKGAGTDDKTLTRIMVSRSEIDLLNIRREFIE 642
Query: 270 ELNRDLLSDLKSELSGDFEDLVKALMK 296
+ ++ L ++ + SGDF + AL
Sbjct: 643 KYDKSLHQAIEGDTSGDFLKALLALCG 669
Score = 110 bits (276), Expect = 1e-25
Identities = 47/224 (20%), Positives = 102/224 (45%), Gaps = 21/224 (9%)
Query: 303 CSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGDYRRL 362
++ A+ G D + +I+ +++N + +E+ Q+Y++LY + L+ G + RL
Sbjct: 25 AEALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGKDLIADLKYELTGKFERL 84
Query: 363 VTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFES 422
+ ++ A +KE+ A G +GTDE +++ ++ EQ+ + +
Sbjct: 85 IVGLMRPP-----------AYCDAKEIKDAISG-IGTDEKCLIEILASRTNEQMHQLVAA 132
Query: 423 YKVEKGRTIEQALKAELSGELLDLTLAIVEC--------IHNPVSYFAKQLYRAMKG-LG 473
YK R +E + + SG + + +++ + V + LY A + G
Sbjct: 133 YKDAYERDLEADIIGDTSGHFQKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEAGELKWG 192
Query: 474 TDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKKKKKKN 517
TD+ I I+ +RS+ L + EY + K +E+ ++ + +
Sbjct: 193 TDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGD 236
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein
complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Length = 323
Score = 304 bits (779), Expect = e-100
Identities = 116/298 (38%), Positives = 188/298 (63%), Gaps = 1/298 (0%)
Query: 215 EPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELNRD 274
T+R F+ S D +A++ A++G+GT+E ++ ILT R+N QR I+++Y ++
Sbjct: 9 RGTVR-DYPDFSPSVDAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKE 67
Query: 275 LLSDLKSELSGDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKE 334
L DLK +LSG FE L+ AL+ P F ++ +++ G + + L EIL T+T+ ++K+
Sbjct: 68 LKDDLKGDLSGHFEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKD 127
Query: 335 IVQNYETLYKRPLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGE 394
I Q Y T+YK+ L + T GD+R+ + + G RD KV+ AK+ ++ LY AGE
Sbjct: 128 ISQAYYTVYKKSLGDDISSETSGDFRKALLTLADGRRDESLKVDEHLAKQDAQILYKAGE 187
Query: 395 GKLGTDEAEFVKVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVECI 454
+ GTDE +F ++ +S+ QL L F+ Y+ + I ++K ELSG DL LAIV C+
Sbjct: 188 NRWGTDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFEDLLLAIVNCV 247
Query: 455 HNPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKK 512
N ++ A++L+RA+KG+GTD+ TL RI+VSRSEIDL +I+ E+++ + +L S +K
Sbjct: 248 RNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYGYSLYSAIKS 305
Score = 169 bits (430), Expect = 2e-48
Identities = 80/334 (23%), Positives = 143/334 (42%), Gaps = 35/334 (10%)
Query: 130 EPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRN 189
T+R F+ S D +A++ A++G+GT+E ++ ILT R+N QR I++ +
Sbjct: 9 RGTVR-DYPDFSPSVDAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKE 67
Query: 190 PFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIR 249
+ +GH + P D + L+ +MKG GTNE +
Sbjct: 68 L----KDDLKGDLSGH-------FEHLMVALVTPPAVF--DAKQLKKSMKGAGTNEDALI 114
Query: 250 QILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFEDLVKALMKSP----------- 298
+ILT RT++Q +I + Y + L D+ SE SGDF + L
Sbjct: 115 EILTTRTSRQMKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLADGRRDESLKVDEHL 174
Query: 299 VDFMCSEIHRALTGLMF-DANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKG 357
+++A D + TEIL ++ ++K Y + ++ +V+ G
Sbjct: 175 AKQDAQILYKAGENRWGTDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSG 234
Query: 358 DYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLA 417
+ L+ I+ R+ P L++ L+ A +G +GTDE ++ +S L
Sbjct: 235 HFEDLLLAIVNCVRNTP--------AFLAERLHRALKG-IGTDEFTLNRIMVSRSEIDLL 285
Query: 418 LVFESYKVEKGRTIEQALKAELSGELLDLTLAIV 451
+ +K G ++ A+K++ SG+ L I
Sbjct: 286 DIRTEFKKHYGYSLYSAIKSDTSGDYEITLLKIC 319
Score = 147 bits (372), Expect = 3e-40
Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 31/324 (9%)
Query: 50 KQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQV 109
+ + +++RG GTD+ L+ IL RS + I +E++ Y + LK ++ + H
Sbjct: 25 EAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGH----- 79
Query: 110 RFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTR 169
+ P D + L+ +MKG GTNE + +ILT
Sbjct: 80 ------------------FEHLMVALVTPPAVF--DAKQLKKSMKGAGTNEDALIEILTT 119
Query: 170 RTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASE 229
RT++Q +I + + ++ SS F + + + + + D A +
Sbjct: 120 RTSRQMKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLADGRRDES--LKVDEHLAKQ 177
Query: 230 DVQALRAAMKG-LGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFE 288
D Q L A + GT+E +IL R+ Q ++Y +D++ +K ELSG FE
Sbjct: 178 DAQILYKAGENRWGTDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFE 237
Query: 289 DLVKALMK---SPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKR 345
DL+ A++ + F+ +HRAL G+ D TL I+V+++ ++ +I ++ Y
Sbjct: 238 DLLLAIVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYGY 297
Query: 346 PLVEHALDVTKGDYRRLVTLILTG 369
L T GDY + I G
Sbjct: 298 SLYSAIKSDTSGDYEITLLKICGG 321
Score = 116 bits (293), Expect = 3e-29
Identities = 60/265 (22%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 33 FRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERT 92
F V + P + KQL +SM+G GT++ L+ IL +R+ +++I + + Y+++
Sbjct: 80 FEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYTVYKKS 139
Query: 93 LKSAIEVGETEHRRSQVRFPPLYSIAGHPVHILTF--QGEPTIRRTNDPFNASEDVQALR 150
L I ET G L G D A +D Q L
Sbjct: 140 LGDDIS-SETS---------------GDFRKALLTLADGRRDESLKVDEHLAKQDAQILY 183
Query: 151 AAMKG-LGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHI 209
A + GT+E +IL R+ Q + + S+ +GH +
Sbjct: 184 KAGENRWGTDEDKFTEILCLRSFPQLKLTFDEYRNISQK----DIVDSIKGELSGHFEDL 239
Query: 210 LTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPI 269
L + + + L A+KG+GT+E + +I+ R+ L+I ++
Sbjct: 240 LLA----IVNCVRNTPAF--LAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDIRTEFKK 293
Query: 270 ELNRDLLSDLKSELSGDFEDLVKAL 294
L S +KS+ SGD+E + +
Sbjct: 294 HYGYSLYSAIKSDTSGDYEITLLKI 318
Score = 106 bits (265), Expect = 1e-25
Identities = 44/220 (20%), Positives = 91/220 (41%), Gaps = 21/220 (9%)
Query: 303 CSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGDYRRL 362
I +A+ G+ D L IL ++NA+ + IV+ Y+ Y + L + G + L
Sbjct: 24 AEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHL 83
Query: 363 VTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFES 422
+ ++T +K+L + +G GT+E +++ ++ Q+ + ++
Sbjct: 84 MVALVTPPAV-----------FDAKQLKKSMKG-AGTNEDALIEILTTRTSRQMKDISQA 131
Query: 423 YKVEKGRTIEQALKAELSGELLDLTLAIV--------ECIHNPVSYFAKQLYRAMKG-LG 473
Y +++ + +E SG+ L + + + A+ LY+A + G
Sbjct: 132 YYTVYKKSLGDDISSETSGDFRKALLTLADGRRDESLKVDEHLAKQDAQILYKAGENRWG 191
Query: 474 TDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKKK 513
TD+ I+ RS L EY + K + +K +
Sbjct: 192 TDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGE 231
Score = 62.7 bits (152), Expect = 7e-11
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 462 AKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKKKKKKN 517
A+ + +A++G+GTD++ LI I+ RS I KEY+ + K L+ +K +
Sbjct: 24 AEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGH 79
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane
binding, matrix vessicle, protein and metal binding
protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A
1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A
1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A
1bcw_A 2ran_A ...
Length = 320
Score = 302 bits (775), Expect = 1e-99
Identities = 124/297 (41%), Positives = 179/297 (60%), Gaps = 1/297 (0%)
Query: 216 PTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELNRDL 275
T+ PF+A D +ALR AMKG+GT+E I +ILT R N QR EI + RDL
Sbjct: 6 GTVT-AFSPFDARADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDL 64
Query: 276 LSDLKSELSGDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEI 335
+ DLKSEL+G FE L+ +LM+ F + A+ G + LTEIL ++T AE++ I
Sbjct: 65 VDDLKSELTGKFETLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNI 124
Query: 336 VQNYETLYKRPLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEG 395
Q Y Y+ L + T G ++RL+ ++L RDP G+V+ ++ ++ L+ AGE
Sbjct: 125 KQVYMQEYEANLEDKITGETSGHFQRLLVVLLQANRDPDGRVDEALVEKDAQVLFRAGEL 184
Query: 396 KLGTDEAEFVKVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVECIH 455
K GTDE F+ + G +S L VF+ Y G IE+ + E SG+L L LA+V+CI
Sbjct: 185 KWGTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEKLLLAVVKCIR 244
Query: 456 NPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKK 512
+ +YFA+ LY +MKG GTD TLIR++VSRSEIDL +I+ E+ + F K+L ++K
Sbjct: 245 SVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEFRKNFAKSLYQMIQK 301
Score = 162 bits (411), Expect = 7e-46
Identities = 85/333 (25%), Positives = 140/333 (42%), Gaps = 35/333 (10%)
Query: 131 PTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNP 190
T+ PF+A D +ALR AMKG+GT+E I +ILT R N QR EI R+
Sbjct: 6 GTVT-AFSPFDARADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRD- 63
Query: 191 FGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQ 250
LT + E + P D AL+ A+KG GTNE V+ +
Sbjct: 64 -----------LVDDLKSELTGKFETLMVSLMRP-ARIFDAHALKHAIKGAGTNEKVLTE 111
Query: 251 ILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFEDLVKALMKSP-----------V 299
IL RT + I + Y E +L + E SG F+ L+ L+++ V
Sbjct: 112 ILASRTPAEVQNIKQVYMQEYEANLEDKITGETSGHFQRLLVVLLQANRDPDGRVDEALV 171
Query: 300 DFMCSEIHRALTGLMF-DANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGD 358
+ + RA D T IL T++ + ++ + Y T+ + E T GD
Sbjct: 172 EKDAQVLFRAGELKWGTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGD 231
Query: 359 YRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLAL 418
+L+ ++ R P ++ LY + +G GTD+ ++V +S L
Sbjct: 232 LEKLLLAVVKCIRSVPAY--------FAETLYYSMKG-AGTDDDTLIRVMVSRSEIDLLD 282
Query: 419 VFESYKVEKGRTIEQALKAELSGELLDLTLAIV 451
+ ++ +++ Q ++ + SG+ L +
Sbjct: 283 IRHEFRKNFAKSLYQMIQKDTSGDYRKALLLLC 315
Score = 146 bits (370), Expect = 6e-40
Identities = 73/327 (22%), Positives = 133/327 (40%), Gaps = 31/327 (9%)
Query: 50 KQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQV 109
+ L ++M+G GTD+ T+++IL SR+ + I F+ + R L ++ T +
Sbjct: 21 EALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDDLKSELTGKFETL- 79
Query: 110 RFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTR 169
+ S+ D AL+ A+KG GTNE V+ +IL
Sbjct: 80 ----MVSLMRPA--------------------RIFDAHALKHAIKGAGTNEKVLTEILAS 115
Query: 170 RTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASE 229
RT + I + ++ N + F V +L Q D +
Sbjct: 116 RTPAEVQNIKQVYMQEYEANLEDKITGETSGHFQRLLVVLL--QANRDPDGRVDEALVEK 173
Query: 230 DVQALRAAMKG-LGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFE 288
D Q L A + GT+E IL R+ + +KY + + E SGD E
Sbjct: 174 DAQVLFRAGELKWGTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLE 233
Query: 289 DLVKALMKS---PVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKR 345
L+ A++K + ++ ++ G D +TL ++V+++ ++ +I + + +
Sbjct: 234 KLLLAVVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEFRKNFAK 293
Query: 346 PLVEHALDVTKGDYRRLVTLILTGTRD 372
L + T GDYR+ + L+ G +
Sbjct: 294 SLYQMIQKDTSGDYRKALLLLCGGDDE 320
Score = 111 bits (280), Expect = 1e-27
Identities = 50/263 (19%), Positives = 99/263 (37%), Gaps = 25/263 (9%)
Query: 33 FRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERT 92
F V + + L +++G GT++ L IL SR+ +++NIK+ + + YE
Sbjct: 76 FETLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEAN 135
Query: 93 LKSAIEVGETEHRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAA 152
L+ I GET S + ++ Q D +D Q L A
Sbjct: 136 LEDKIT-GET-------------SGHFQRLLVVLLQANRDPDGRVDEALVEKDAQVLFRA 181
Query: 153 MKG-LGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILT 211
+ GT+E IL R+ + + ++ + +G +L
Sbjct: 182 GELKWGTDEETFITILGTRSVSHLRRVFDKYMTISGF----QIEETIDRETSGDLEKLLL 237
Query: 212 FQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIEL 271
++ + L +MKG GT++ + +++ R+ L+I ++
Sbjct: 238 A----VVKCIRSVPAY--FAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEFRKNF 291
Query: 272 NRDLLSDLKSELSGDFEDLVKAL 294
+ L ++ + SGD+ + L
Sbjct: 292 AKSLYQMIQKDTSGDYRKALLLL 314
Score = 104 bits (261), Expect = 4e-25
Identities = 46/224 (20%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 303 CSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGDYRRL 362
+ +A+ G+ D T+ +IL ++ NA+ +EI ++TL+ R LV+ G + L
Sbjct: 20 AEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDDLKSELTGKFETL 79
Query: 363 VTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFES 422
+ ++ + L A +G GT+E ++ ++ ++ + +
Sbjct: 80 MVSLMRPA-----------RIFDAHALKHAIKG-AGTNEKVLTEILASRTPAEVQNIKQV 127
Query: 423 YKVEKGRTIEQALKAELSGELLDLTLAIV--------ECIHNPVSYFAKQLYRAMKG-LG 473
Y E +E + E SG L + ++ V A+ L+RA + G
Sbjct: 128 YMQEYEANLEDKITGETSGHFQRLLVVLLQANRDPDGRVDEALVEKDAQVLFRAGELKWG 187
Query: 474 TDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKKKKKKN 517
TD++T I I+ +RS L + +Y + +E + ++ +
Sbjct: 188 TDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGD 231
Score = 63.4 bits (154), Expect = 3e-11
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 450 IVECIHNPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESH 509
+ A+ L +AMKG+GTD++T+++I+ SR+ I ++ LF + L
Sbjct: 8 VTAFSPFDARADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDD 67
Query: 510 VKKKKKKN 517
+K +
Sbjct: 68 LKSELTGK 75
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein,
helix BUN heparin, hexasaccharide, metal binding
protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB:
2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Length = 308
Score = 302 bits (774), Expect = 2e-99
Identities = 102/289 (35%), Positives = 171/289 (59%), Gaps = 1/289 (0%)
Query: 225 FNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELS 284
F+A D + A+K G +E I ILT R+N QR +I Y ++L S LKS LS
Sbjct: 2 FDAERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALS 61
Query: 285 GDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYK 344
G E ++ L+K+P + SE+ ++ GL D ++L EI+ ++TN E++EI + Y+ +YK
Sbjct: 62 GHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYK 121
Query: 345 RPLVEHALDVTKGDYRRLVTLILTGTRDPPGKV-NPEKAKELSKELYIAGEGKLGTDEAE 403
L + + T GD+R+L+ + G R G V + E + +++LY AG + GTD +
Sbjct: 122 TDLEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARDLYDAGVKRKGTDVPK 181
Query: 404 FVKVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVECIHNPVSYFAK 463
++ + +S L VF+ YK + ++++ E+ G+L + L +V+CI N YFA
Sbjct: 182 WISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNLVQCIQNKPLYFAD 241
Query: 464 QLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKK 512
+LY +MKG GT + LIRI+VSRSE+D+ I+ E++R + K+L ++++
Sbjct: 242 RLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQ 290
Score = 168 bits (427), Expect = 3e-48
Identities = 68/325 (20%), Positives = 128/325 (39%), Gaps = 35/325 (10%)
Query: 140 FNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVV 199
F+A D + A+K G +E I ILT R+N QR +I R+ + S++
Sbjct: 2 FDAERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALS 61
Query: 200 QLFAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQ 259
+ P D L+A+MKGLGT+E + +I+ RTN++
Sbjct: 62 GHL-----------ETVILGLLKTPAQY--DASELKASMKGLGTDEDSLIEIICSRTNQE 108
Query: 260 RLEILEKYPIELNRDLLSDLKSELSGDFEDLVKALMKSPVDFM------------CSEIH 307
EI Y DL D+ S+ SGDF L+ AL K +++
Sbjct: 109 LQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARDLY 168
Query: 308 RALTG-LMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGDYRRLVTLI 366
A D I+ ++ ++++ Y++ ++E KGD +
Sbjct: 169 DAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLENAFLNL 228
Query: 367 LTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFESYKVE 426
+ ++ P + LY + +GK GT + +++ +S + + +K +
Sbjct: 229 VQCIQNKP--------LYFADRLYDSMKGK-GTRDKVLIRIMVSRSEVDMLKIRSEFKRK 279
Query: 427 KGRTIEQALKAELSGELLDLTLAIV 451
G+++ ++ + G+ L +
Sbjct: 280 YGKSLYYYIQQDTKGDYQKALLYLC 304
Score = 146 bits (369), Expect = 5e-40
Identities = 64/324 (19%), Positives = 132/324 (40%), Gaps = 30/324 (9%)
Query: 50 KQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQV 109
+ +++ G D+ T++ IL +RS ++I ++RR ++ L SA++ + H + +
Sbjct: 9 LNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGHLETVI 68
Query: 110 RFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTR 169
+ P D L+A+MKGLGT+E + +I+
Sbjct: 69 -----LGLLKTPAQY--------------------DASELKASMKGLGTDEDSLIEIICS 103
Query: 170 RTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASE 229
RTN++ EI + S F V + + D +
Sbjct: 104 RTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGRRAED-GSVIDYELIDQ 162
Query: 230 DVQALRAAMKG-LGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFE 288
D + L A GT+ I+T R+ ++ ++Y D+L ++ E+ GD E
Sbjct: 163 DARDLYDAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLE 222
Query: 289 DLVKALMK---SPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKR 345
+ L++ + + ++ ++ G L I+V+++ ++ +I ++ Y +
Sbjct: 223 NAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGK 282
Query: 346 PLVEHALDVTKGDYRRLVTLILTG 369
L + TKGDY++ + + G
Sbjct: 283 SLYYYIQQDTKGDYQKALLYLCGG 306
Score = 111 bits (279), Expect = 2e-27
Identities = 49/265 (18%), Positives = 98/265 (36%), Gaps = 28/265 (10%)
Query: 33 FRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERT 92
+ + P Y +L SM+G GTD+ +L+ I+ SR+ +L+ I R ++ Y+
Sbjct: 64 LETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTD 123
Query: 93 LKSAIEVGET--EHRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALR 150
L+ I +T + R+ V L D +D + L
Sbjct: 124 LEKDII-SDTSGDFRKLMVA--------------LAKGRRAEDGSVIDYELIDQDARDLY 168
Query: 151 AAMKG-LGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHI 209
A GT+ I+T R+ ++ + S+ + G +
Sbjct: 169 DAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPY----DMLESIRKEVKGDLENA 224
Query: 210 LTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPI 269
++ + L +MKG GT + V+ +I+ R+ L+I ++
Sbjct: 225 FLN----LVQCIQNKPLY--FADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKR 278
Query: 270 ELNRDLLSDLKSELSGDFEDLVKAL 294
+ + L ++ + GD++ + L
Sbjct: 279 KYGKSLYYYIQQDTKGDYQKALLYL 303
Score = 105 bits (263), Expect = 3e-25
Identities = 44/221 (19%), Positives = 86/221 (38%), Gaps = 22/221 (9%)
Query: 303 CSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGDYRRL 362
I A+ D T+ IL ++NA+ ++I Y+ K+ L G +
Sbjct: 8 ALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGHLETV 67
Query: 363 VTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFES 422
+ +L A+ + EL + +G GTDE +++ ++ ++L +
Sbjct: 68 ILGLL-----------KTPAQYDASELKASMKGL-GTDEDSLIEIICSRTNQELQEINRV 115
Query: 423 YKVEKGRTIEQALKAELSGELLDLTLAIVECIHNP---------VSYFAKQLYRAMKG-L 472
YK +E+ + ++ SG+ L +A+ + + A+ LY A
Sbjct: 116 YKEMYKTDLEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARDLYDAGVKRK 175
Query: 473 GTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKKK 513
GTD I I+ RS L + Y+ + ++K+
Sbjct: 176 GTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKE 216
Score = 64.9 bits (158), Expect = 1e-11
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 462 AKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKKKKKKN 517
A + A+K G D+ T++ I+ +RS +I Y+R K L S +K +
Sbjct: 8 ALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGH 63
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent
hexamerization switch E76, low calcium form; 1.93A
{Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Length = 315
Score = 301 bits (773), Expect = 3e-99
Identities = 123/298 (41%), Positives = 185/298 (62%), Gaps = 1/298 (0%)
Query: 215 EPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELNRD 274
+ T++ + FN+ ED + LR AMKG+GT+E I IL R+N QR +I Y +
Sbjct: 3 QGTVK-PHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKH 61
Query: 275 LLSDLKSELSGDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKE 334
L +LKSELSG++E AL++ P +F+ ++H A+ GL D N L +IL T++NA+I
Sbjct: 62 LEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHA 121
Query: 335 IVQNYETLYKRPLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGE 394
I ++ LYK L + + T G+++RL+ +L G R VN A E + +Y AGE
Sbjct: 122 IKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGE 181
Query: 395 GKLGTDEAEFVKVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVECI 454
G++GTDE+ F V +SY QL +F Y +TI QA++ E SG++ + LAIV+ +
Sbjct: 182 GQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSV 241
Query: 455 HNPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKK 512
N +YFA++L+ AMKGLGT +TLIRI+VSRSEIDL NIK+ ++ ++ K+L +
Sbjct: 242 ENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIAD 299
Score = 172 bits (437), Expect = 1e-49
Identities = 75/334 (22%), Positives = 149/334 (44%), Gaps = 35/334 (10%)
Query: 130 EPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRN 189
+ T++ + FN+ ED + LR AMKG+GT+E I IL R+N QR +I ++
Sbjct: 3 QGTVK-PHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKH 61
Query: 190 PFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIR 249
S + + + +L E + L AAMKGLGT++ +
Sbjct: 62 LEDELKSELSGNYEAAALALLRKPDE-------------FLAEQLHAAMKGLGTDKNALI 108
Query: 250 QILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFEDLVKALMKSP----------- 298
IL ++N Q I + + DL ++ SE SG+F+ L+ ++++
Sbjct: 109 DILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAH 168
Query: 299 VDFMCSEIHRALTGLMF-DANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKG 357
+ I++A G + D + +L T++ ++ +I Y + + +++ + G
Sbjct: 169 AAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSG 228
Query: 358 DYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLA 417
D + + I+ + ++ L+ A +G LGT + +++ +S LA
Sbjct: 229 DIKNGLLAIVKSVENRF--------AYFAERLHHAMKG-LGTSDKTLIRILVSRSEIDLA 279
Query: 418 LVFESYKVEKGRTIEQALKAELSGELLDLTLAIV 451
+ E+++ G+++ + + + SG+ DL L I
Sbjct: 280 NIKETFQAMYGKSLYEFIADDCSGDYKDLLLQIT 313
Score = 147 bits (373), Expect = 2e-40
Identities = 72/328 (21%), Positives = 138/328 (42%), Gaps = 44/328 (13%)
Query: 50 KQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQV 109
+ L ++M+G GTD+ ++ IL +RS + IK ++ + + L+ + + S
Sbjct: 19 ETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDEL-----KSELSGN 73
Query: 110 RFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTR 169
++ P + L AAMKGLGT++ + IL
Sbjct: 74 YEAAALALLRKPDEF--------------------LAEQLHAAMKGLGTDKNALIDILCT 113
Query: 170 RTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHP------VHILTFQGEPTIRRTND 223
++N Q I + + + + QG +
Sbjct: 114 QSNAQIHAIKAAFKLLYKE--------DLEKEIISETSGNFQRLLVSMLQGGRKEDEPVN 165
Query: 224 PFNASEDVQALRAAMKG-LGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSE 282
+A+ED A+ A +G +GT+E+ +L R+ Q +I +Y N+ +L +++E
Sbjct: 166 AAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENE 225
Query: 283 LSGDFEDLVKALMKS---PVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNY 339
SGD ++ + A++KS + +H A+ GL TL ILV+++ ++ I + +
Sbjct: 226 FSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETF 285
Query: 340 ETLYKRPLVEHALDVTKGDYRR-LVTLI 366
+ +Y + L E D GDY+ L+ +
Sbjct: 286 QAMYGKSLYEFIADDCSGDYKDLLLQIT 313
Score = 114 bits (286), Expect = 2e-28
Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 29/266 (10%)
Query: 33 FRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERT 92
+ A + + P + +QL+ +M+G GTD L+ IL ++S + IK F+ Y+
Sbjct: 74 YEAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKED 133
Query: 93 LKSAIEVGETEHRRSQVRFPPLYSIAGH--PVHILTFQGEPTIRRTNDPFNASEDVQALR 150
L+ I ET G+ + + QG + +A+ED A+
Sbjct: 134 LEKEII-SETS---------------GNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIY 177
Query: 151 AAMKG-LGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHI 209
A +G +GT+E+ +L R+ Q +I + N+ ++ F+G +
Sbjct: 178 QAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKT----ILQAIENEFSGDIKNG 233
Query: 210 LTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPI 269
L ++ + F + L AMKGLGT++ + +IL R+ I E +
Sbjct: 234 LLAI----VKSVENRFAYFAER--LHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQA 287
Query: 270 ELNRDLLSDLKSELSGDFEDLVKALM 295
+ L + + SGD++DL+ +
Sbjct: 288 MYGKSLYEFIADDCSGDYKDLLLQIT 313
Score = 102 bits (255), Expect = 3e-24
Identities = 51/241 (21%), Positives = 108/241 (44%), Gaps = 25/241 (10%)
Query: 290 LVKALMKSPVDFM----CSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKR 345
+V+ +K F + +A+ G+ D ++T IL T++NA+ ++I +Y TL+ +
Sbjct: 1 VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGK 60
Query: 346 PLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFV 405
L + G+Y +L + A++L + LGTD+ +
Sbjct: 61 HLEDELKSELSGNYEAAALALLRKPDE-------FLAEQLHAAM-----KGLGTDKNALI 108
Query: 406 KVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVECIHNP-------- 457
+ QS Q+ + ++K+ +E+ + +E SG L +++++
Sbjct: 109 DILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAH 168
Query: 458 VSYFAKQLYRAMKG-LGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKKKKKK 516
+ A +Y+A +G +GTD+ ++ +RS L I EY ++ NKT+ ++ +
Sbjct: 169 AAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSG 228
Query: 517 N 517
+
Sbjct: 229 D 229
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form,
FULL-length protein comprising protein core and
N-terminal domain, metal; 1.80A {Sus scrofa} SCOP:
a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Length = 346
Score = 301 bits (772), Expect = 1e-98
Identities = 108/297 (36%), Positives = 166/297 (55%), Gaps = 1/297 (0%)
Query: 216 PTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELNRDL 275
+ FN S DV+AL A+ G +E I +ILT+RTN QR +I Y E + L
Sbjct: 34 SAVSPY-PTFNPSSDVEALHKAITVKGVDEATIIEILTKRTNAQRQQIKAAYLQEKGKPL 92
Query: 276 LSDLKSELSGDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEI 335
LK L+G E++ AL+K+P F E+ A+ GL D +TL EIL ++TN EI+EI
Sbjct: 93 DEALKKALTGHLEEVALALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREI 152
Query: 336 VQNYETLYKRPLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEG 395
+ Y+ KR L + T GDY++ + + G R +N + A ++ LY AGE
Sbjct: 153 NRVYKEELKRDLAKDITSDTSGDYQKALLSLAKGDRSEDLAINDDLADTDARALYEAGER 212
Query: 396 KLGTDEAEFVKVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVECIH 455
+ GTD F+ + +SY L VF+ Y + + L EL G++ + +V+C
Sbjct: 213 RKGTDLNVFITILTTRSYPHLRRVFQKYSKYSKHDMNKVLDLELKGDIENCLTVVVKCAT 272
Query: 456 NPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKK 512
+ +FA++L++AMKG+GT +TLIRI+VSRSEID+ +IK Y++L+ +L +
Sbjct: 273 SKPMFFAEKLHQAMKGIGTRHKTLIRIMVSRSEIDMNDIKACYQKLYGISLCQAILD 329
Score = 168 bits (426), Expect = 1e-47
Identities = 82/341 (24%), Positives = 137/341 (40%), Gaps = 51/341 (14%)
Query: 131 PTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNP 190
+ FN S DV+AL A+ G +E I +ILT+RTN QR +I ++ +
Sbjct: 34 SAVSPY-PTFNPSSDVEALHKAITVKGVDEATIIEILTKRTNAQRQQIKAAYLQEKGKPL 92
Query: 191 --------FGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLG 242
G + L D LRAAMKGLG
Sbjct: 93 DEALKKALTGHLEEVALALLKTPAQF---------------------DADELRAAMKGLG 131
Query: 243 TNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFEDLVKALMKSP---- 298
T+E + +IL RTN++ EI Y EL RDL D+ S+ SGD++ + +L K
Sbjct: 132 TDEDTLNEILASRTNREIREINRVYKEELKRDLAKDITSDTSGDYQKALLSLAKGDRSED 191
Query: 299 -------VDFMCSEIHRALTGLM-FDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEH 350
D ++ A D N IL T++ ++ + Q Y K + +
Sbjct: 192 LAINDDLADTDARALYEAGERRKGTDLNVFITILTTRSYPHLRRVFQKYSKYSKHDMNKV 251
Query: 351 ALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGH 410
KGD +T+++ P +++L+ A +G +GT +++
Sbjct: 252 LDLELKGDIENCLTVVVKCATSKP--------MFFAEKLHQAMKG-IGTRHKTLIRIMVS 302
Query: 411 QSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIV 451
+S + + Y+ G ++ QA+ E G+ + +A+
Sbjct: 303 RSEIDMNDIKACYQKLYGISLCQAILDETKGDYEKILVALC 343
Score = 150 bits (379), Expect = 6e-41
Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 31/324 (9%)
Query: 50 KQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQV 109
+ L++++ G D+AT++ IL R+ + IK + + + L A++ T H
Sbjct: 49 EALHKAITVKGVDEATIIEILTKRTNAQRQQIKAAYLQEKGKPLDEALKKALTGHLEEVA 108
Query: 110 RFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTR 169
++ P D LRAAMKGLGT+E + +IL
Sbjct: 109 -----LALLKTPAQF--------------------DADELRAAMKGLGTDEDTLNEILAS 143
Query: 170 RTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASE 229
RTN++ EI + R+ +S + + + +G+ + + A
Sbjct: 144 RTNREIREINRVYKEELKRDLAKDITSDTSGDYQKALLSLA--KGDRSEDLAINDDLADT 201
Query: 230 DVQALRAAMKG-LGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFE 288
D +AL A + GT+ V ILT R+ + +KY D+ L EL GD E
Sbjct: 202 DARALYEAGERRKGTDLNVFITILTTRSYPHLRRVFQKYSKYSKHDMNKVLDLELKGDIE 261
Query: 289 DLVKALMK---SPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKR 345
+ + ++K S F ++H+A+ G+ TL I+V+++ ++ +I Y+ LY
Sbjct: 262 NCLTVVVKCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMVSRSEIDMNDIKACYQKLYGI 321
Query: 346 PLVEHALDVTKGDYRRLVTLILTG 369
L + LD TKGDY +++ + G
Sbjct: 322 SLCQAILDETKGDYEKILVALCGG 345
Score = 111 bits (279), Expect = 3e-27
Identities = 54/263 (20%), Positives = 97/263 (36%), Gaps = 25/263 (9%)
Query: 33 FRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERT 92
+ + + P + +L +M+G GTD+ TL IL SR+ ++ I R ++ +R
Sbjct: 104 LEEVALALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRVYKEELKRD 163
Query: 93 LKSAIEVGETEHRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAA 152
L I +T S + +G+ + + A D +AL A
Sbjct: 164 LAKDIT-SDT-------------SGDYQKALLSLAKGDRSEDLAINDDLADTDARALYEA 209
Query: 153 MKG-LGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILT 211
+ GT+ V ILT R+ + + + + + G + LT
Sbjct: 210 GERRKGTDLNVFITILTTRSYPHLRRVFQKYSKYSKH----DMNKVLDLELKGDIENCLT 265
Query: 212 FQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIEL 271
++ + L AMKG+GT + +I+ R+ +I Y
Sbjct: 266 V----VVKCATSKPMFFAEK--LHQAMKGIGTRHKTLIRIMVSRSEIDMNDIKACYQKLY 319
Query: 272 NRDLLSDLKSELSGDFEDLVKAL 294
L + E GD+E ++ AL
Sbjct: 320 GISLCQAILDETKGDYEKILVAL 342
Score = 106 bits (265), Expect = 2e-25
Identities = 51/254 (20%), Positives = 100/254 (39%), Gaps = 22/254 (8%)
Query: 273 RDLLSDLKSELSGDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEI 332
++ + +K G + +P +H+A+T D T+ EIL +TNA+
Sbjct: 19 QEYIKTVKGSKGGPGSAVSPYPTFNPSSD-VEALHKAITVKGVDEATIIEILTKRTNAQR 77
Query: 333 KEIVQNYETLYKRPLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIA 392
++I Y +PL E G + +L A+ + EL A
Sbjct: 78 QQIKAAYLQEKGKPLDEALKKALTGHLEEVALALLKTP-----------AQFDADELRAA 126
Query: 393 GEGKLGTDEAEFVKVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVE 452
+G GTDE ++ ++ ++ + YK E R + + + ++ SG+ L++ +
Sbjct: 127 MKGL-GTDEDTLNEILASRTNREIREINRVYKEELKRDLAKDITSDTSGDYQKALLSLAK 185
Query: 453 C--------IHNPVSYFAKQLYRAMKG-LGTDKQTLIRIIVSRSEIDLGNIKKEYERLFN 503
+ A+ LY A + GTD I I+ +RS L + ++Y +
Sbjct: 186 GDRSEDLAINDDLADTDARALYEAGERRKGTDLNVFITILTTRSYPHLRRVFQKYSKYSK 245
Query: 504 KTLESHVKKKKKKN 517
+ + + K +
Sbjct: 246 HDMNKVLDLELKGD 259
Score = 63.5 bits (154), Expect = 4e-11
Identities = 20/86 (23%), Positives = 34/86 (39%)
Query: 432 EQALKAELSGELLDLTLAIVECIHNPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDL 491
EQ + G A+ S + L++A+ G D+ T+I I+ R+
Sbjct: 18 EQEYIKTVKGSKGGPGSAVSPYPTFNPSSDVEALHKAITVKGVDEATIIEILTKRTNAQR 77
Query: 492 GNIKKEYERLFNKTLESHVKKKKKKN 517
IK Y + K L+ +KK +
Sbjct: 78 QQIKAAYLQEKGKPLDEALKKALTGH 103
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein;
2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A
1ycn_A 2q4c_A 1dk5_A
Length = 321
Score = 299 bits (768), Expect = 2e-98
Identities = 93/290 (32%), Positives = 136/290 (46%), Gaps = 1/290 (0%)
Query: 223 DPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSE 282
+ SED + LR A G GTNE +I IL R +QR I + Y DLL L E
Sbjct: 14 TVPSVSEDCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYAETYGEDLLKALDKE 73
Query: 283 LSGDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETL 342
LS DFE LV P + + A L EI T++ ++ Q Y
Sbjct: 74 LSNDFERLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYHAR 133
Query: 343 YKRPLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEA 402
YK+ L E T GD+ +L+ +++ R +VN AK +K L+ K +D+
Sbjct: 134 YKKSLEEDVAHHTTGDFHKLLLPLVSSYRYEGEEVNMTLAKTEAKLLHEKISNKAYSDD- 192
Query: 403 EFVKVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVECIHNPVSYFA 462
+ ++V +S Q+ YK E G I + LKA+ E L L + V+C+ P YF
Sbjct: 193 DVIRVLATRSKAQINATLNHYKNEYGNDINKDLKADPKDEFLALLRSTVKCLVYPEKYFE 252
Query: 463 KQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKK 512
K L A+ GTD+ L R++ +R+E+DL I EY+R + L + K
Sbjct: 253 KVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQRRNSVPLTRAIVK 302
Score = 171 bits (435), Expect = 3e-49
Identities = 63/330 (19%), Positives = 117/330 (35%), Gaps = 33/330 (10%)
Query: 138 DPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSS 197
+ SED + LR A G GTNE +I IL R +QR I + +
Sbjct: 14 TVPSVSEDCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYAETYGEDLLKALDKE 73
Query: 198 VVQLFAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTN 257
+ F + DP A D A K ++ V+ +I R+
Sbjct: 74 LSNDF-----------ERLVLLWALDP--AERDALLANEATKRWTSSNQVLMEIACTRSA 120
Query: 258 KQRLEILEKYPIELNRDLLSDLKSELSGDFEDLVKALMKSP-----------VDFMCSEI 306
Q L + Y + L D+ +GDF L+ L+ S +
Sbjct: 121 NQLLHARQAYHARYKKSLEEDVAHHTTGDFHKLLLPLVSSYRYEGEEVNMTLAKTEAKLL 180
Query: 307 HRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGDYRRLVTLI 366
H ++ + + + +L T++ A+I + +Y+ Y + + K ++ L+
Sbjct: 181 HEKISNKAYSDDDVIRVLATRSKAQINATLNHYKNEYGNDINKDLKADPKDEFLALLRST 240
Query: 367 LTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFESYKVE 426
+ P K L + + GTDE +V ++ L ++ + Y+
Sbjct: 241 VKCLVYPEKYF----EKVLRLAIN-----RRGTDEGALTRVVCTRAEVDLKVIADEYQRR 291
Query: 427 KGRTIEQALKAELSGELLDLTLAIVECIHN 456
+ +A+ + G+ L L + + N
Sbjct: 292 NSVPLTRAIVKDTHGDYEKLLLVLAGHVEN 321
Score = 148 bits (374), Expect = 1e-40
Identities = 64/330 (19%), Positives = 121/330 (36%), Gaps = 38/330 (11%)
Query: 50 KQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQV 109
+QL ++ G GT++ ++ IL R+ I++ + Y L A++ E + ++
Sbjct: 23 EQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYAETYGEDLLKALD-KELSNDFERL 81
Query: 110 RFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTR 169
+ A P A D A K ++ V+ +I
Sbjct: 82 ----VLLWALDP--------------------AERDALLANEATKRWTSSNQVLMEIACT 117
Query: 170 RTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFN--- 226
R+ Q L R+ + V H L + R + N
Sbjct: 118 RSANQLLHA-----RQAYHARYKKSLEEDVAHHTTGDFHKLLLPLVSSYRYEGEEVNMTL 172
Query: 227 ASEDVQALRAAMKG-LGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSG 285
A + + L + +++ VIR +L R+ Q L Y E D+ DLK++
Sbjct: 173 AKTEAKLLHEKISNKAYSDDDVIR-VLATRSKAQINATLNHYKNEYGNDINKDLKADPKD 231
Query: 286 DFEDLVKALMK---SPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETL 342
+F L+++ +K P + + A+ D LT ++ T+ ++K I Y+
Sbjct: 232 EFLALLRSTVKCLVYPEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQRR 291
Query: 343 YKRPLVEHALDVTKGDYRRLVTLILTGTRD 372
PL + T GDY +L+ ++ +
Sbjct: 292 NSVPLTRAIVKDTHGDYEKLLLVLAGHVEN 321
Score = 116 bits (291), Expect = 5e-29
Identities = 39/266 (14%), Positives = 90/266 (33%), Gaps = 26/266 (9%)
Query: 33 FRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERT 92
F + + + +P + + + + LM I +RS L + ++ + RY+++
Sbjct: 78 FERLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYHARYKKS 137
Query: 93 LKSAIEVGETEHRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAA 152
L+ + T + + + A + + L
Sbjct: 138 LEEDVAHHTTGDFHK--------------LLLPLVSSYRYEGEEVNMTLAKTEAKLLHEK 183
Query: 153 MKG-LGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILT 211
+ +++ VIR +L R+ Q L + + + + + +L
Sbjct: 184 ISNKAYSDDDVIR-VLATRSKAQINATLNHYKNEYGN----DINKDLKADPKDEFLALLR 238
Query: 212 FQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIEL 271
T++ P + LR A+ GT+E + +++ R I ++Y
Sbjct: 239 S----TVKCLVYPEKY--FEKVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQRRN 292
Query: 272 NRDLLSDLKSELSGDFEDLVKALMKS 297
+ L + + GD+E L+ L
Sbjct: 293 SVPLTRAIVKDTHGDYEKLLLVLAGH 318
Score = 114 bits (286), Expect = 3e-28
Identities = 37/241 (15%), Positives = 80/241 (33%), Gaps = 20/241 (8%)
Query: 285 GDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYK 344
L V C ++ +A +G + + +IL + + I + Y Y
Sbjct: 4 HHHATLTVPTTVPSVSEDCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYAETYG 63
Query: 345 RPLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEF 404
L++ D+ RLV L A+ + A + +
Sbjct: 64 EDLLKALDKELSNDFERLVLLWALDP-----------AERDALLANEATKRW-TSSNQVL 111
Query: 405 VKVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVEC--------IHN 456
+++ +S QL ++Y +++E+ + +G+ L L +V
Sbjct: 112 MEIACTRSANQLLHARQAYHARYKKSLEEDVAHHTTGDFHKLLLPLVSSYRYEGEEVNMT 171
Query: 457 PVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKKKKKK 516
AK L+ + +IR++ +RS+ + Y+ + + +K K
Sbjct: 172 LAKTEAKLLHEKISNKAYSDDDVIRVLATRSKAQINATLNHYKNEYGNDINKDLKADPKD 231
Query: 517 N 517
Sbjct: 232 E 232
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal
binding protein, calcium, calcium/phospholipid-binding;
1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A
1i4a_A 1aow_A
Length = 322
Score = 299 bits (768), Expect = 2e-98
Identities = 122/300 (40%), Positives = 179/300 (59%), Gaps = 1/300 (0%)
Query: 213 QGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELN 272
T++ FNA+ED Q LR AMKGLGT+E I +L R QR EI Y +
Sbjct: 6 TKGGTVK-AASGFNATEDAQVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIG 64
Query: 273 RDLLSDLKSELSGDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEI 332
RDLL DLKSELS +FE ++ +M V + E+ RA+ G D L EIL ++ EI
Sbjct: 65 RDLLEDLKSELSSNFEQVILGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEI 124
Query: 333 KEIVQNYETLYKRPLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIA 392
+ I Q Y+ Y R L E T ++R++ + G RD ++ K+ +++LY A
Sbjct: 125 RRINQTYQQQYGRSLEEDICSDTSFMFQRVLVSLTAGGRDEGNYLDDALVKQDAQDLYEA 184
Query: 393 GEGKLGTDEAEFVKVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVE 452
GE + GTDE +F+ + ++ L VF+ YK + IEQ++K+E SG D LAIV+
Sbjct: 185 GEKRWGTDEVKFLSILCSRNRNHLLHVFDEYKRISQKDIEQSIKSETSGSFEDALLAIVK 244
Query: 453 CIHNPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKK 512
C+ N +YFA++LY++MKGLGTD TLIR++VSR+EID+ +I+ ++RL+ K+L S +K
Sbjct: 245 CMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRAEIDMLDIRANFKRLYGKSLYSFIKG 304
Score = 169 bits (429), Expect = 2e-48
Identities = 77/336 (22%), Positives = 140/336 (41%), Gaps = 35/336 (10%)
Query: 128 QGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCN 187
T++ FNA+ED Q LR AMKGLGT+E I +L R QR EI
Sbjct: 6 TKGGTVK-AASGFNATEDAQVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIG 64
Query: 188 RNPFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETV 247
R+ S + F + ++T + DVQ LR AMKG GT+E
Sbjct: 65 RDLLEDLKSELSSNFEQVILGMMT---PTVLY----------DVQELRRAMKGAGTDEGC 111
Query: 248 IRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFEDLVKALMKSP--------- 298
+ +IL R ++ I + Y + R L D+ S+ S F+ ++ +L
Sbjct: 112 LIEILASRNPEEIRRINQTYQQQYGRSLEEDICSDTSFMFQRVLVSLTAGGRDEGNYLDD 171
Query: 299 --VDFMCSEIHRALTGLMF-DANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVT 355
V +++ A D IL ++ + + Y+ + ++ + + T
Sbjct: 172 ALVKQDAQDLYEAGEKRWGTDEVKFLSILCSRNRNHLLHVFDEYKRISQKDIEQSIKSET 231
Query: 356 KGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQ 415
G + + I+ R+ P ++ LY + +G LGTD++ ++V ++
Sbjct: 232 SGSFEDALLAIVKCMRNKP--------AYFAERLYKSMKG-LGTDDSTLIRVMVSRAEID 282
Query: 416 LALVFESYKVEKGRTIEQALKAELSGELLDLTLAIV 451
+ + ++K G+++ +K + SG+ + L +
Sbjct: 283 MLDIRANFKRLYGKSLYSFIKGDTSGDYRKVLLILC 318
Score = 145 bits (367), Expect = 2e-39
Identities = 73/324 (22%), Positives = 141/324 (43%), Gaps = 31/324 (9%)
Query: 50 KQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQV 109
+ L ++M+G GTD+ ++ +L R+ + I+ ++ R L ++ + +
Sbjct: 24 QVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLEDLKSELSSNFEQ-- 81
Query: 110 RFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTR 169
+ ++T + DVQ LR AMKG GT+E + +IL
Sbjct: 82 ----------VILGMMT---PTVLY----------DVQELRRAMKGAGTDEGCLIEILAS 118
Query: 170 RTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASE 229
R ++ I + ++ R+ S +F V + + D +
Sbjct: 119 RNPEEIRRINQTYQQQYGRSLEEDICSDTSFMFQRVLVSLTAGGRDEG--NYLDDALVKQ 176
Query: 230 DVQALRAAMKG-LGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFE 288
D Q L A + GT+E IL R L + ++Y +D+ +KSE SG FE
Sbjct: 177 DAQDLYEAGEKRWGTDEVKFLSILCSRNRNHLLHVFDEYKRISQKDIEQSIKSETSGSFE 236
Query: 289 DLVKALMK---SPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKR 345
D + A++K + + +++++ GL D +TL ++V++ ++ +I N++ LY +
Sbjct: 237 DALLAIVKCMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRAEIDMLDIRANFKRLYGK 296
Query: 346 PLVEHALDVTKGDYRRLVTLILTG 369
L T GDYR+++ ++ G
Sbjct: 297 SLYSFIKGDTSGDYRKVLLILCGG 320
Score = 116 bits (291), Expect = 6e-29
Identities = 56/263 (21%), Positives = 106/263 (40%), Gaps = 25/263 (9%)
Query: 33 FRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERT 92
F + + + + Y ++L R+M+G GTD+ L+ IL SR+ ++ I + ++++Y R+
Sbjct: 79 FEQVILGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGRS 138
Query: 93 LKSAIEVGETEHRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAA 152
L+ I +T S V + G D +D Q L A
Sbjct: 139 LEEDIC-SDT-------------SFMFQRVLVSLTAGGRDEGNYLDDALVKQDAQDLYEA 184
Query: 153 MKG-LGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILT 211
+ GT+E IL R L + + R + S+ +G L
Sbjct: 185 GEKRWGTDEVKFLSILCSRNRNHLLHVFDEYKRISQK----DIEQSIKSETSGSFEDALL 240
Query: 212 FQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIEL 271
++ + + L +MKGLGT+++ + +++ R L+I +
Sbjct: 241 A----IVKCMRNKPAY--FAERLYKSMKGLGTDDSTLIRVMVSRAEIDMLDIRANFKRLY 294
Query: 272 NRDLLSDLKSELSGDFEDLVKAL 294
+ L S +K + SGD+ ++ L
Sbjct: 295 GKSLYSFIKGDTSGDYRKVLLIL 317
Score = 103 bits (257), Expect = 2e-24
Identities = 46/224 (20%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 303 CSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGDYRRL 362
+ +A+ GL D + + +L + A+ +EI Y++ R L+E ++ ++
Sbjct: 23 AQVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLEDLKSELSSNFEQV 82
Query: 363 VTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFES 422
+ ++T T +EL A +G GTDE +++ ++ E++ + ++
Sbjct: 83 ILGMMTPT-----------VLYDVQELRRAMKG-AGTDEGCLIEILASRNPEEIRRINQT 130
Query: 423 YKVEKGRTIEQALKAELSGELLDLTLAIVECIHNPVSYF--------AKQLYRAMKG-LG 473
Y+ + GR++E+ + ++ S + +++ + +Y A+ LY A + G
Sbjct: 131 YQQQYGRSLEEDICSDTSFMFQRVLVSLTAGGRDEGNYLDDALVKQDAQDLYEAGEKRWG 190
Query: 474 TDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKKKKKKN 517
TD+ + I+ SR+ L ++ EY+R+ K +E +K + +
Sbjct: 191 TDEVKFLSILCSRNRNHLLHVFDEYKRISQKDIEQSIKSETSGS 234
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid
binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Length = 327
Score = 299 bits (767), Expect = 3e-98
Identities = 120/298 (40%), Positives = 177/298 (59%), Gaps = 2/298 (0%)
Query: 216 PTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELNRDL 275
T++ ++ FN D + L AMKG+GTNE I +LT+R+N QR +I + + + +DL
Sbjct: 13 VTVK-SSSHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAKSFKAQFGKDL 71
Query: 276 LSDLKSELSGDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEI 335
LKSELSG FE L+ ALM P + E+H A+ GL + EIL ++T +++EI
Sbjct: 72 TETLKSELSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREI 131
Query: 336 VQNYETLYKRPLVEHALDVTKGDYRRLVTLILTGTRDP-PGKVNPEKAKELSKELYIAGE 394
++ YE Y L E T G R++ +L G+RD V+P A + +++LY AGE
Sbjct: 132 MKAYEEDYGSSLEEDIQADTSGYLERILVCLLQGSRDDVSSFVDPALALQDAQDLYAAGE 191
Query: 395 GKLGTDEAEFVKVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVECI 454
GTDE +F+ + +S L VFE Y+ ++IE ++K+E G L + L +V+C
Sbjct: 192 KIRGTDEMKFITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCT 251
Query: 455 HNPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKK 512
N SYFA++LY AMKG GT TLIR IVSRSEIDL IK +++++ KTL S + +
Sbjct: 252 QNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMYGKTLSSMIME 309
Score = 166 bits (421), Expect = 4e-47
Identities = 75/335 (22%), Positives = 138/335 (41%), Gaps = 38/335 (11%)
Query: 131 PTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNP 190
T++ ++ FN D + L AMKG+GTNE I +LT+R+N QR +I K +
Sbjct: 13 VTVK-SSSHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQI-----AKSFKAQ 66
Query: 191 FGPQSSSVVQL-FAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIR 249
FG + ++ +G + P + + L AMKGLGT E VI
Sbjct: 67 FGKDLTETLKSELSGK-------FERLIVALMYPP--YRYEAKELHDAMKGLGTKEGVII 117
Query: 250 QILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFEDLVKALMKSP----------- 298
+IL RT Q EI++ Y + L D++++ SG E ++ L++
Sbjct: 118 EILASRTKNQLREIMKAYEEDYGSSLEEDIQADTSGYLERILVCLLQGSRDDVSSFVDPA 177
Query: 299 -VDFMCSEIHRALTG-LMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTK 356
+++ A D IL T++ + + + YE + + + + T
Sbjct: 178 LALQDAQDLYAAGEKIRGTDEMKFITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETH 237
Query: 357 GDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQL 416
G + ++ T++ A+ L + GT + ++ +S L
Sbjct: 238 GSLEEAMLTVVKCTQNLHSYF----AERLYYAMK-----GAGTRDGTLIRNIVSRSEIDL 288
Query: 417 ALVFESYKVEKGRTIEQALKAELSGELLDLTLAIV 451
L+ +K G+T+ + + SG+ + L++V
Sbjct: 289 NLIKCHFKKMYGKTLSSMIMEDTSGDYKNALLSLV 323
Score = 150 bits (379), Expect = 3e-41
Identities = 71/322 (22%), Positives = 135/322 (41%), Gaps = 31/322 (9%)
Query: 50 KQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQV 109
+ LY++M+G GT++ ++ +L RS + I + F+ ++ + L ++ + +
Sbjct: 28 ETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAKSFKAQFGKDLTETLKSELSGKFERLI 87
Query: 110 RFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTR 169
++ P + + L AMKGLGT E VI +IL
Sbjct: 88 -----VALMYPPYRY--------------------EAKELHDAMKGLGTKEGVIIEILAS 122
Query: 170 RTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASE 229
RT Q EI++ + + V +L + DP A +
Sbjct: 123 RTKNQLREIMKAYEEDYGSSLEEDIQADTSGYLERILVCLLQGSRDDVSSFV-DPALALQ 181
Query: 230 DVQALRAAMKG-LGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFE 288
D Q L AA + GT+E IL R+ L + E+Y N+ + +KSE G E
Sbjct: 182 DAQDLYAAGEKIRGTDEMKFITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGSLE 241
Query: 289 DLVKALMKS---PVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKR 345
+ + ++K + ++ A+ G TL +V+++ ++ I +++ +Y +
Sbjct: 242 EAMLTVVKCTQNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMYGK 301
Query: 346 PLVEHALDVTKGDYRR-LVTLI 366
L ++ T GDY+ L++L+
Sbjct: 302 TLSSMIMEDTSGDYKNALLSLV 323
Score = 113 bits (285), Expect = 3e-28
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 26/267 (9%)
Query: 33 FRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERT 92
F + V ++ P Y K+L+ +M+G GT + ++ IL SR++ L I + +E Y +
Sbjct: 83 FERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGSS 142
Query: 93 LKSAIEVGETEHRRSQVRFPPLYSIAGHPVHILTFQGE-PTIRRTNDPFNASEDVQALRA 151
L+ I+ +T S + + QG + DP A +D Q L A
Sbjct: 143 LEEDIQ-ADT-------------SGYLERILVCLLQGSRDDVSSFVDPALALQDAQDLYA 188
Query: 152 AMKG-LGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHIL 210
A + GT+E IL R+ L + E + N+ S+ G +
Sbjct: 189 AGEKIRGTDEMKFITILCTRSATHLLRVFEEYEKIANK----SIEDSIKSETHGSLEEAM 244
Query: 211 TFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIE 270
++ T + + + L AMKG GT + + + + R+ I +
Sbjct: 245 LT----VVKCTQNLHSY--FAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKM 298
Query: 271 LNRDLLSDLKSELSGDFEDLVKALMKS 297
+ L S + + SGD+++ + +L+ S
Sbjct: 299 YGKTLSSMIMEDTSGDYKNALLSLVGS 325
Score = 105 bits (264), Expect = 2e-25
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 369 GTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFESYKVEKG 428
T NP+ ++ LY A +G +GT+E + V +S Q + +S+K + G
Sbjct: 13 VTVKSSSHFNPDPD---AETLYKAMKG-IGTNEQAIIDVLTKRSNTQRQQIAKSFKAQFG 68
Query: 429 RTIEQALKAELSGELLDLTLAIVECIHNPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSE 488
+ + + LK+ELSG+ L +A ++ P Y AK+L+ AMKGLGT + +I I+ SR++
Sbjct: 69 KDLTETLKSELSGKFERLIVA---LMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTK 125
Query: 489 IDLGNIKKEYERLFNKTLESHVKKK 513
L I K YE + +LE ++
Sbjct: 126 NQLREIMKAYEEDYGSSLEEDIQAD 150
Score = 105 bits (263), Expect = 3e-25
Identities = 47/225 (20%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 303 CSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGDYRRL 362
+++A+ G+ + + ++L ++N + ++I ++++ + + L E G + RL
Sbjct: 27 AETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAKSFKAQFGKDLTETLKSELSGKFERL 86
Query: 363 VTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFES 422
+ ++ + +KEL+ A +G LGT E +++ ++ QL + ++
Sbjct: 87 IVALM-----------YPPYRYEAKELHDAMKG-LGTKEGVIIEILASRTKNQLREIMKA 134
Query: 423 YKVEKGRTIEQALKAELSGELLDLTLAIVECIHNP---------VSYFAKQLYRAMKG-L 472
Y+ + G ++E+ ++A+ SG L + + +++ + A+ LY A +
Sbjct: 135 YEEDYGSSLEEDIQADTSGYLERILVCLLQGSRDDVSSFVDPALALQDAQDLYAAGEKIR 194
Query: 473 GTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKKKKKKN 517
GTD+ I I+ +RS L + +EYE++ NK++E +K + +
Sbjct: 195 GTDEMKFITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGS 239
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A
{Giardia intestinalis} PDB: 2iic_A
Length = 310
Score = 275 bits (706), Expect = 2e-89
Identities = 36/294 (12%), Positives = 105/294 (35%), Gaps = 12/294 (4%)
Query: 226 NASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSEL-S 284
+ + + ++A ++ NE + +R + ++R E+ ++ + ++ LK + +
Sbjct: 5 SYGDAIPEVKAILEA--KNEEELVTFTSRWSAEERKELRTQFQDTTGLEFIAFLKKCIKN 62
Query: 285 GDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYK 344
G +ED++ + + I +A+ + D + ++++ T E ++ Q Y+
Sbjct: 63 GPYEDVMALGWDCNISARVNVIKKAMKNVN-DFRAIHDVVLIATPDERLKLAQAYKEKTG 121
Query: 345 RPLVEHALD--VTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEA 402
L++ +D L L + R ++ L D
Sbjct: 122 NDLLQDFVDQIPLTSAASYLCHLAIRENR-----TPRGSVASDAEVLKHNLIDADEPDHE 176
Query: 403 EFVKVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSG-ELLDLTLAIVECIHNPVSYF 461
V++ + ++ + ++V G+++++A++ + E P
Sbjct: 177 AVVRLIITSTADEYKEINHRFEVLTGKSVQEAIETRYADKENARGLCIAHYYNLAPARAV 236
Query: 462 AKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKKKKK 515
A + A++ D ++ DL + + + + + +
Sbjct: 237 AYAFHSAVETQNDDMAYEQAARITGLFHDLHKFAWVHYACWGVMRDDILSRFQS 290
Score = 108 bits (270), Expect = 3e-26
Identities = 45/329 (13%), Positives = 98/329 (29%), Gaps = 54/329 (16%)
Query: 141 NASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRN---------PF 191
+ + + ++A ++ NE + +R + ++R E+
Sbjct: 5 SYGDAIPEVKAILEA--KNEEELVTFTSRWSAEERKELRTQFQDTTGLEFIAFLKKCIKN 62
Query: 192 GPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQI 251
GP + + + V ++ AMK + I +
Sbjct: 63 GPYEDVMALGWDCNIS---------------------ARVNVIKKAMKN-VNDFRAIHDV 100
Query: 252 LTRRTNKQRLEILEKYPIELNRDLLSDLKSEL--SGDFEDLVKALMKSP------VDFMC 303
+ T +RL++ + Y + DLL D ++ + L ++ V
Sbjct: 101 VLIATPDERLKLAQAYKEKTGNDLLQDFVDQIPLTSAASYLCHLAIRENRTPRGSVASDA 160
Query: 304 SEIHRALTGLM-FDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALD--VTKGDYR 360
+ L D + +++T T E KEI +E L + + + A++ +
Sbjct: 161 EVLKHNLIDADEPDHEAVVRLIITSTADEYKEINHRFEVLTGKSV-QEAIETRYADKENA 219
Query: 361 RLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVF 420
R + + P + ++ + A E D A + L
Sbjct: 220 RGLCIAHYYNLAPA--------RAVAYAFHSAVET-QNDDMAYEQAARITGLFHDLHKFA 270
Query: 421 ESYKVEKGRTIEQALKAELSGELLDLTLA 449
+ G + L S E +
Sbjct: 271 WVHYACWGVMRDDILSRFQSKEANKVNFR 299
Score = 103 bits (259), Expect = 8e-25
Identities = 24/310 (7%), Positives = 84/310 (27%), Gaps = 39/310 (12%)
Query: 60 GTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQVRFPPLYSIAG 119
++ L+ S + + ++ +F+ + ++ +
Sbjct: 19 AKNEEELVTFTSRWSAEERKELRTQFQDTTGLEFIAFLK---KCIKNGPYEDVMALGWDC 75
Query: 120 HPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEIL 179
+ V ++ AMK + I ++ T +RL++
Sbjct: 76 NIS---------------------ARVNVIKKAMKN-VNDFRAIHDVVLIATPDERLKL- 112
Query: 180 EYVFRKCNRNPFGPQSSSVVQ--LFAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAA 237
+ + G + L R + + D + L+
Sbjct: 113 ----AQAYKEKTGNDLLQDFVDQIPLTSAASYLCHLAIRENR--TPRGSVASDAEVLKHN 166
Query: 238 MKG-LGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSG-DFEDLVKAL- 294
+ + + +++ T + EI ++ + + + +++ + + +
Sbjct: 167 LIDADEPDHEAVVRLIITSTADEYKEINHRFEVLTGKSVQEAIETRYADKENARGLCIAH 226
Query: 295 --MKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHAL 352
+P + H A+ D +T ++ + + + +
Sbjct: 227 YYNLAPARAVAYAFHSAVETQNDDMAYEQAARITGLFHDLHKFAWVHYACWGVMRDDILS 286
Query: 353 DVTKGDYRRL 362
+ ++
Sbjct: 287 RFQSKEANKV 296
Score = 84.5 bits (209), Expect = 3e-18
Identities = 20/268 (7%), Positives = 63/268 (23%), Gaps = 34/268 (12%)
Query: 33 FRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERT 92
+ I+ + ++M+ D + +++ + + + + ++ +
Sbjct: 65 YEDVMALGWDCNISARVNVIKKAMKN-VNDFRAIHDVVLIATPDERLKLAQAYKEKTGND 123
Query: 93 LKSAIEVGETEHRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAA 152
L L R + + D + L+
Sbjct: 124 LLQDFVDQIP---------------LTSAASYLCHLAIRENR--TPRGSVASDAEVLKHN 166
Query: 153 MKG-LGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHP-VHIL 210
+ + + +++ T + EI F ++ +A L
Sbjct: 167 LIDADEPDHEAVVRLIITSTADEYKEINHR-FEVLTGKSV---QEAIETRYADKENARGL 222
Query: 211 TFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIE 270
P A +A++ + + + +
Sbjct: 223 CI----AHYYNLAPARAVAYA--FHSAVETQNDDMAYEQAARITGLFHDLHKFAWVH-YA 275
Query: 271 LNRDLLSDL-KSELSGDFE--DLVKALM 295
+ D+ S + + A +
Sbjct: 276 CWGVMRDDILSRFQSKEANKVNFRDACL 303
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein;
1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Length = 337
Score = 264 bits (677), Expect = 1e-84
Identities = 60/299 (20%), Positives = 111/299 (37%), Gaps = 12/299 (4%)
Query: 222 NDPFNASEDVQA-LRAAMKGLGTNETVIR--QILTRRTNKQRLEILEKYPIELNRDLLSD 278
N + S V A ++ ++ + +I Q + + L +
Sbjct: 3 NKNYQMSTGVTAVVQKVVEACQDESKRLDLIEIARSYPPNQLRNMQRTFQAITGTFLDAF 62
Query: 279 LKSELSGDFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQN 338
LK LS DFE LV L K +C I A G D L ++L+T E++EI Q
Sbjct: 63 LKKHLSKDFESLVLMLYKPRAQLLCELIRGATKGAGTDEKCLVDVLLTIETHEVREIRQL 122
Query: 339 YETLYKRPLVEHALDVTKGDYR--RLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGK 396
Y LY L + Y +L+ + TG R P + + +E + A E K
Sbjct: 123 YYQLYNDSLGDVVRKDCGDKYMWAKLINAVATGDRIP---RDTHELEEDLVLVRKAIETK 179
Query: 397 L--GTDEAEFVKVFGHQSYEQLALVFESYKVE-KGRTIEQALKAELSGELLDLTLAIVEC 453
+ + ++++F + + + Y + G ++ ++ E G +
Sbjct: 180 GVKKDEVSTWIRIFATYTRADFRQLHKMYSAKYNGDSLRAGVEDEFQGLDEYAFKLAHDF 239
Query: 454 IHNPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKK 512
+++P A + A G G+D L RI + K Y++++ + +
Sbjct: 240 LYDPCCAAAFSMNVAFAGSGSDSNRLNRITAMHFR-ECKGCKYYYKKVYGQAFDERCAT 297
Score = 150 bits (379), Expect = 4e-41
Identities = 49/350 (14%), Positives = 104/350 (29%), Gaps = 40/350 (11%)
Query: 137 NDPFNASEDVQA-LRAAMKGLGTNETVIR--QILTRRTNKQRLEILEYVFRKCNRNPFGP 193
N + S V A ++ ++ + +I Q +
Sbjct: 3 NKNYQMSTGVTAVVQKVVEACQDESKRLDLIEIARSYPPNQLRNMQRTFQAITGTFL--- 59
Query: 194 QSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILT 253
+ + + + ++ +P + + +R A KG GT+E + +L
Sbjct: 60 -DAFLKKHLSKDFESLVLMLYKPRAQL---------LCELIRGATKGAGTDEKCLVDVLL 109
Query: 254 RRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFED--LVKALMK--------SPVDFMC 303
+ EI + Y N L ++ + + L+ A+ ++
Sbjct: 110 TIETHEVREIRQLYYQLYNDSLGDVVRKDCGDKYMWAKLINAVATGDRIPRDTHELEEDL 169
Query: 304 SEIHRALTGLMF---DANTLTEILVTKTNAEIKEIVQNYETLY-KRPLVEHALDVTKGDY 359
+ +A+ + +T I T T A+ +++ + Y Y L D +G
Sbjct: 170 VLVRKAIETKGVKKDEVSTWIRIFATYTRADFRQLHKMYSAKYNGDSLRAGVEDEFQGLD 229
Query: 360 RRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALV 419
L DP + + +A G G+D ++ +
Sbjct: 230 EYAFKLAHDFLYDPC--------CAAAFSMNVAFAGS-GSDSNRLNRITAMHF-RECKGC 279
Query: 420 FESYKVEKGRTIEQALKAELSGELLDLTLAIVECIHNPVSYFAKQLYRAM 469
YK G+ ++ EL G D + E + P+
Sbjct: 280 KYYYKKVYGQAFDERCATELKGVYGDAIKLLWEPVTVPLLSMDDYQGSEQ 329
Score = 132 bits (333), Expect = 1e-34
Identities = 55/357 (15%), Positives = 111/357 (31%), Gaps = 38/357 (10%)
Query: 42 HNPIAYYTKQLYRSMRGPGTDDA--TLMRILISRSEIDLENIKREFERRYERTLKSAIEV 99
+ T + + + + L+ I S L N++R F+ L + ++
Sbjct: 6 YQMSTGVTAVVQKVVEACQDESKRLDLIEIARSYPPNQLRNMQRTFQAITGTFLDAFLK- 64
Query: 100 GETEHRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTN 159
S+ + + + + +R A KG GT+
Sbjct: 65 ----KHLSKDFESLVLMLYKPRAQL--------------------LCELIRGATKGAGTD 100
Query: 160 ETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTFQGEPTIR 219
E + +L + EI + ++ N + + + G+ R
Sbjct: 101 EKCLVDVLLTIETHEVREIRQLYYQLYNDSLGDVVRKDCGDKYMWAKLINAVATGD---R 157
Query: 220 RTNDPFNASEDVQALRAAMKGL---GTNETVIRQILTRRTNKQRLEILEKYPIELN-RDL 275
D ED+ +R A++ + +I T ++ + Y + N L
Sbjct: 158 IPRDTHELEEDLVLVRKAIETKGVKKDEVSTWIRIFATYTRADFRQLHKMYSAKYNGDSL 217
Query: 276 LSDLKSELSGDFEDLVKAL---MKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEI 332
+ ++ E G E K + P ++ A G D+N L I E
Sbjct: 218 RAGVEDEFQGLDEYAFKLAHDFLYDPCCAAAFSMNVAFAGSGSDSNRLNRITAMHFR-EC 276
Query: 333 KEIVQNYETLYKRPLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKEL 389
K Y+ +Y + E KG Y + L+ P ++ + E + +
Sbjct: 277 KGCKYYYKKVYGQAFDERCATELKGVYGDAIKLLWEPVTVPLLSMDDYQGSEQHRPM 333
Score = 109 bits (273), Expect = 2e-26
Identities = 39/282 (13%), Positives = 86/282 (30%), Gaps = 28/282 (9%)
Query: 33 FRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERT 92
F + + + + +G GTD+ L+ +L++ ++ I++ + + Y +
Sbjct: 71 FESLVLMLYKPRAQLLCELIRGATKGAGTDEKCLVDVLLTIETHEVREIRQLYYQLYNDS 130
Query: 93 LKSAIEVGETEHRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAA 152
L + + + + L R D ED+ +R A
Sbjct: 131 LGDVVR-KDCGDK--------------YMWAKLINAVATGDRIPRDTHELEEDLVLVRKA 175
Query: 153 MKGL---GTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHI 209
++ + +I T ++ + K N + + V F G +
Sbjct: 176 IETKGVKKDEVSTWIRIFATYTRADFRQLHKMYSAKYNGDSL---RAGVEDEFQGLDEYA 232
Query: 210 LTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPI 269
DP A+ + A G G++ + +I + Y
Sbjct: 233 FKL----AHDFLYDPCCAAAFS--MNVAFAGSGSDSNRLNRITAMHFR-ECKGCKYYYKK 285
Query: 270 ELNRDLLSDLKSELSGDFEDLVKALMKSPVDFMCSEIHRALT 311
+ +EL G + D +K L + + S +
Sbjct: 286 VYGQAFDERCATELKGVYGDAIKLLWEPVTVPLLSMDDYQGS 327
Score = 51.2 bits (122), Expect = 4e-07
Identities = 10/65 (15%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 455 HNPVSYFAKQLYRAMKGLGTDKQ--TLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKK 512
+ + + + ++ + + LI I S L N+++ ++ + L++ +KK
Sbjct: 6 YQMSTGVTAVVQKVVEACQDESKRLDLIEIARSYPPNQLRNMQRTFQAITGTFLDAFLKK 65
Query: 513 KKKKN 517
K+
Sbjct: 66 HLSKD 70
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding
protein, membrane-binding protein, binding protein;
1.90A {Giardia intestinalis} PDB: 4evh_A
Length = 295
Score = 249 bits (638), Expect = 2e-79
Identities = 53/275 (19%), Positives = 102/275 (37%), Gaps = 11/275 (4%)
Query: 227 ASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSG- 285
++ L+ A+ +E I I + + + R +I + Y ++L D+K L G
Sbjct: 4 VTDIANELKQAIDA--KDEVQIAFIASEYSAESREKIAKAYVASYGKELPDDIKKALKGG 61
Query: 286 DFEDLVKALMKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKR 345
E L+ L + I AL+G D + ++ T + E V Y ++K+
Sbjct: 62 SEESLLMDLFSDRHEVRAQHIRDALSGRN-DHMAFFDTVILCTPEDWHETVAAYTRMFKK 120
Query: 346 PLVEHALDVTKGDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFV 405
PLVE + + + + P ++ ++ L A + K + A +
Sbjct: 121 PLVEDFMKDVGRKEDWCLLMEKWMAHER--VSRPGSPEDEAQRLDQAFDQK---NTAYLI 175
Query: 406 KVFGHQSYEQLALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVECIHNPVSYFAKQL 465
FG + + E++K + G++IEQA+ + + A +
Sbjct: 176 DFFGTVPSAEYRPIAEAFKAQNGKSIEQAIATIYTKTDYYTFYCAHFALLGMHRLAAYLI 235
Query: 466 YRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYER 500
A G +K + RI + L K Y+
Sbjct: 236 NCACNDKGDEK-RMRRITGMMVDKCL-GAKHAYKI 268
Score = 117 bits (296), Expect = 7e-30
Identities = 30/318 (9%), Positives = 81/318 (25%), Gaps = 39/318 (12%)
Query: 142 ASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQL 201
++ L+ A+ +E I I + + + R +I + + L
Sbjct: 4 VTDIANELKQAIDA--KDEVQIAFIASEYSAESREKIAKAYVASYGKE---LPDDIKKAL 58
Query: 202 FAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRL 261
G +L Q +R A+ G + + T +
Sbjct: 59 KGGSEESLLMDLFSDRHEV---------RAQHIRDALSG-RNDHMAFFDTVILCTPEDWH 108
Query: 262 EILEKYPIELNRDLLSDLKSELSGDFED--LVKALMKS-------PVDFMCSEIHRALTG 312
E + Y + L+ D ++ + L++ M + + +A
Sbjct: 109 ETVAAYTRMFKKPLVEDFMKDVGRKEDWCLLMEKWMAHERVSRPGSPEDEAQRLDQAFDQ 168
Query: 313 LMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGDYRRLVTLILTGTRD 372
+ L + T +AE + I + ++ + + + +
Sbjct: 169 K--NTAYLIDFFGTVPSAEYRPIAEAFKAQNGKSIEQAIATIYTKTDYYTFYCAHFALLG 226
Query: 373 PPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLALVFESYKVEKGRTIE 432
+ + + A K + ++ Y +
Sbjct: 227 MH--------RLAAYLINCACNDKGDEKRMRRITGMMVDKCLGAKHAYKIYGD-----MG 273
Query: 433 QALKAELSGELLDLTLAI 450
++ + + +
Sbjct: 274 TDIERCFDKRMAPILRTL 291
Score = 109 bits (275), Expect = 5e-27
Identities = 28/227 (12%), Positives = 70/227 (30%), Gaps = 24/227 (10%)
Query: 298 PVDFMCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLYKRPLVEH-ALDVTK 356
V + +E+ +A+ D + I + ++I + Y Y + L + +
Sbjct: 3 KVTDIANELKQAIDAK--DEVQIAFIASEYSAESREKIAKAYVASYGKELPDDIKKALKG 60
Query: 357 GDYRRLVTLILTGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQL 416
G L+ + + ++ + ++ + A G D F + E
Sbjct: 61 GSEESLLMDLFS-----------DRHEVRAQHIRDALSG--RNDHMAFFDTVILCTPEDW 107
Query: 417 ALVFESYKVEKGRTIEQALKAELSGELLDLTLAIVECIH------NPVSYFAKQLYRAMK 470
+Y + + + ++ + L H A++L +A
Sbjct: 108 HETVAAYTRMFKKPLVEDFMKDVGRKEDWCLLMEKWMAHERVSRPGSPEDEAQRLDQAFD 167
Query: 471 GLGTDKQTLIRIIVSRSEIDLGNIKKEYERLFNKTLESHVKKKKKKN 517
+ LI + + I + ++ K++E + K
Sbjct: 168 Q--KNTAYLIDFFGTVPSAEYRPIAEAFKAQNGKSIEQAIATIYTKT 212
Score = 104 bits (262), Expect = 3e-25
Identities = 34/322 (10%), Positives = 75/322 (23%), Gaps = 45/322 (13%)
Query: 50 KQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQV 109
+L +++ D+ + I S E I + + Y + L I+ +
Sbjct: 9 NELKQAIDA--KDEVQIAFIASEYSAESREKIAKAYVASYGKELPDDIKKALKGGSEESL 66
Query: 110 RFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTR 169
Q +R A+ G + +
Sbjct: 67 LMDLFSDRHEV------------------------RAQHIRDALSG-RNDHMAFFDTVIL 101
Query: 170 RTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASE 229
T + E + R + ++ L + R + P + +
Sbjct: 102 CTPEDWHETVAAYTRMFKKPL----VEDFMKDVGRKEDWCLLMEKWMAHERVSRPGSPED 157
Query: 230 DVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELNRDLLSDLKSELSGDFED 289
+ Q L A N + + + I E + + + + + + +
Sbjct: 158 EAQRLDQAFDQ--KNTAYLIDFFGTVPSAEYRPIAEAFKAQNGKSIEQAIATIYTKTDYY 215
Query: 290 LVKAL---MKSPVDFMCSEIHRALTGLMFDANTLTEILVTKTNA--EIKEIVQNYETLYK 344
+ I+ A D + I + K + Y +
Sbjct: 216 TFYCAHFALLGMHRLAAYLINCACND-KGDEKRMRRITGMMVDKCLGAKHAYKIYGDMGT 274
Query: 345 RPLVEHALDVTKGDYRR-LVTL 365
L TL
Sbjct: 275 D-----IERCFDKRMAPILRTL 291
Score = 96.0 bits (239), Expect = 3e-22
Identities = 27/262 (10%), Positives = 68/262 (25%), Gaps = 33/262 (12%)
Query: 33 FRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERT 92
+D + + + ++ G D +I + D + R +++
Sbjct: 63 EESLLMDLFSDRHEVRAQHIRDALSG-RNDHMAFFDTVILCTPEDWHETVAAYTRMFKKP 121
Query: 93 LKSAIEVGETEHRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAA 152
L + L + R + P + ++ Q L A
Sbjct: 122 LVEDFM-KDVG---------------RKEDWCLLMEKWMAHERVSRPGSPEDEAQRLDQA 165
Query: 153 MKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTF 212
N + + + I E F+ N ++ ++ +
Sbjct: 166 FD--QKNTAYLIDFFGTVPSAEYRPIAEA-FKAQNGKSI---EQAIATIYTKTDYYTFYC 219
Query: 213 QGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEKYPIELN 272
+ A G + + R +T + L Y ++
Sbjct: 220 ----AHFALLGMHRL--AAYLINCACNDKGDEKRMRR--ITGMMVDKCLGAKHAY--KIY 269
Query: 273 RDLLSDLKSELSGDFEDLVKAL 294
D+ +D++ +++ L
Sbjct: 270 GDMGTDIERCFDKRMAPILRTL 291
Score = 52.1 bits (125), Expect = 1e-07
Identities = 12/143 (8%), Positives = 33/143 (23%), Gaps = 24/143 (16%)
Query: 22 GKSLRYLVPPVFRKAQVDFIHNPIAYYTKQLYRSMRGPGTDDATLMRILISRSEIDLENI 81
K L+ + + ++L ++ + A L+ + + I
Sbjct: 132 RKEDWCLLMEKWMAHERVSRPGSPEDEAQRLDQAFDQ--KNTAYLIDFFGTVPSAEYRPI 189
Query: 82 KREFERRYERTLKSAIEVGETEHRRSQVRFPPLYSIAGHPVHILTFQGEPTIRRTNDPFN 141
F+ + ++++ AI +
Sbjct: 190 AEAFKAQNGKSIEQAIA-TIY---------------TKTDYYTFYC----AHFALLGMHR 229
Query: 142 ASEDVQALRAAMKGLGTNETVIR 164
+ A G + + R
Sbjct: 230 L--AAYLINCACNDKGDEKRMRR 250
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 75.7 bits (185), Expect = 2e-14
Identities = 76/463 (16%), Positives = 149/463 (32%), Gaps = 130/463 (28%)
Query: 138 DPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSS 197
D F + D + ++ K + + E I I+ + L + +
Sbjct: 27 DAFVDNFDCKDVQDMPKSILSKE-EIDHIIMSKDAVSGTLRLFWTLLS--------KQEE 77
Query: 198 VVQLFAGHPVH---------ILTFQGEPTIRRT----------ND-----PFNAS--EDV 231
+VQ F + I T Q +P++ ND +N S +
Sbjct: 78 MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY 137
Query: 232 QALRAA--------------MKGLG---------TNETVIRQI------LT---RRTNKQ 259
LR A + G G + V ++ L + +
Sbjct: 138 LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197
Query: 260 RLEILEK--YPIELNRDLLSDLKSELSGDFEDLVKALMKSPVDFMCSEIH-RALTGLMFD 316
LE+L+K Y I+ N SD S + + L + S+ + L L+
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL----RRLLKSKPYENCL--LVLL 251
Query: 317 ----ANTLT------EILVTKTNAEIKEIVQNYETLYKRPLVEHALDVTKGDYRRLVTLI 366
A +IL+T ++ + + T L H++ +T + + L+
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT-THISLDHHSMTLTPDEVKSLLLKY 310
Query: 367 L-TGTRDPPG---KVNPEK----AKELSKEL-------YIAGEGKLGT---------DEA 402
L +D P NP + A+ + L ++ + KL T + A
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD-KLTTIIESSLNVLEPA 369
Query: 403 EFVKVFGHQSYEQLALVF-ESYKVEKGRTIE---QALKAELSGELLDL--TLAIVECIHN 456
E+ + +++L+ VF S + + + +++ ++VE
Sbjct: 370 EY-----RKMFDRLS-VFPPSAHIPTI-LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422
Query: 457 PVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKEYE 499
+ +Y +K ++ L R IV NI K ++
Sbjct: 423 ESTISIPSIYLELKVKLENEYALHRSIVDHY-----NIPKTFD 460
Score = 57.9 bits (139), Expect = 5e-09
Identities = 47/275 (17%), Positives = 88/275 (32%), Gaps = 63/275 (22%)
Query: 272 NRDLLSDLKSELSGDF-----EDLVKALMKSP-VDFMCSEIHRAL-TGLMFDANTLTEIL 324
+D+LS + +F +D+ K+++ +D + T +F L
Sbjct: 18 YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW------TL 71
Query: 325 VTKTNAEIKEIV-----QNYETLYKR-------P-----LVEHALDVTKGDYRRLVTLIL 367
++K +++ V NY+ L P + D D + +
Sbjct: 72 LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131
Query: 368 TGTRDPPGKVNPEKAKELSKELYIAGEGKLGTDEAEFVKVFGHQSYEQLAL-VFESYKVE 426
+ R P + EL + +G LG G +AL V SYKV+
Sbjct: 132 S--RLQPYLKLRQALLELRPAKNVLIDGVLG---------SGKTW---VALDVCLSYKVQ 177
Query: 427 KGR-------TIEQALKAELSGELLDLTLAIVECIHNPVSYFAKQLYRAMKGLGTDKQTL 479
++ E E+L L ++ S + + + L
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS---DHSSNIKLRIHSIQAEL 234
Query: 480 IRIIVS----RSEIDLGNIK-KEYERLFN---KTL 506
R++ S + L N++ + FN K L
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL 269
Score = 40.2 bits (93), Expect = 0.002
Identities = 45/345 (13%), Positives = 96/345 (27%), Gaps = 128/345 (37%)
Query: 1 MTRNTRLMPTTYAQT---AVCQIVGKSLRYLVPPVFRKAQVDFIHNPIAYYTKQL--YRS 55
R+ + + I+ SL L P +RK + +L +
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRK-----------MF-DRLSVFP- 382
Query: 56 MRGPGTDDA-----TLMRILISRSEIDLENIKREFERRYERTLKSAIEVGETEHRRSQVR 110
A L I + D+ + + + S +E ++ +
Sbjct: 383 ------PSAHIPTILLSLIWFDVIKSDVMVVVNKLHK------YSLVE------KQPK-- 422
Query: 111 FPPLYSIAGHPVHILTFQGEPTIRRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRR 170
SI +++ ++ + + AL R I+
Sbjct: 423 -ESTISI--PSIYLE-------LKVKLE------NEYALH-------------RSIVDH- 452
Query: 171 TNKQRLEILEYVFRK--CNRNPFGPQSSSVVQLFAGHPVHI------------------L 210
Y K + + P GH H+
Sbjct: 453 ----------YNIPKTFDSDDLIPPYLDQYFYSHIGH--HLKNIEHPERMTLFRMVFLDF 500
Query: 211 TFQGEPTIRRTNDPFNAS----EDVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEK 266
F E IR + +NAS +Q L+ + N+ ++ + +
Sbjct: 501 RFL-EQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDP---------KYERLVNAILD 550
Query: 267 YPIELNRDLLSDLKSELSGDFEDLVK-ALMKSPVDFMCSEIHRAL 310
+ ++ +L+ + DL++ ALM + + + E H+ +
Sbjct: 551 FLPKIEENLICS-------KYTDLLRIALM-AEDEAIFEEAHKQV 587
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 60.4 bits (146), Expect = 1e-09
Identities = 102/604 (16%), Positives = 181/604 (29%), Gaps = 206/604 (34%)
Query: 24 SLRY--LVPP--VFRKAQV--DFIHNPIAYYTKQLYRSMRGPGTDDATLMRI-LISR--- 73
SL + LVP F +Q+ F K L G DD L+ +
Sbjct: 15 SLEHVLLVPTASFFIASQLQEQF--------NKILPEPTEGFAADDEPTTPAELVGKFLG 66
Query: 74 ---SEID----------LENIKREFERRYER-----TLKSAIEVGETEHRRSQVRFPPL- 114
S ++ L EFE Y L + + E+ + V+ L
Sbjct: 67 YVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKL---LQENDTTLVKTKELI 123
Query: 115 --YSIAGHPVHILTFQGEPTIRRTNDP-FNASEDVQA-LRAAMKGLGTNETVIR--QIL- 167
Y A P +++N F A + A L A G G + + L
Sbjct: 124 KNYITA------RIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLY 177
Query: 168 -TRRTNKQRLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFN 226
T L +++ + + ++F ++IL + P+ + +
Sbjct: 178 QTYHVLVGDL--IKFSAETL--SELIRTTLDAEKVF-TQGLNILEWLENPS-NTPDKDYL 231
Query: 227 ASEDV--------QA----------------LRAAMKGLGTNETVIRQILT--------- 253
S + Q LR+ +KG T + ++T
Sbjct: 232 LSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGA-T--GHSQGLVTAVAIAETDS 288
Query: 254 ----RRTNKQRLEIL--------EKYPIELNRDLLSDLKSELSGDFEDLVKALMKSPVDF 301
+ ++ + +L E YP + L + D + + + SP
Sbjct: 289 WESFFVSVRKAITVLFFIGVRCYEAYPN-------TSLPPSILEDSLENNEGVP-SP--- 337
Query: 302 MCSEIHRALTGLMFDANTLTEILVTKTNAEIKEIVQNYETLY--KRPLVEHALDVTKGDY 359
M S ++ L + + V KTN+ + Q +L + LV V+ G
Sbjct: 338 MLS-----ISNLTQEQ---VQDYVNKTNSHLPAGKQVEISLVNGAKNLV-----VS-GPP 383
Query: 360 RRLVTLILT--GTRDPPGKVNPEKAK-ELSKELYIAGEGKLGTDEAEFVKVFG------H 410
+ L L LT + P G ++++ S+ KL +F F H
Sbjct: 384 QSLYGLNLTLRKAKAPSGL---DQSRIPFSER-------KL-----KFSNRFLPVASPFH 428
Query: 411 QSY---------EQLA---LVFES-------YKVEKGRTIEQALKAELSGELLDLTLAIV 451
+ L + F + Y G + + L +S ++D I
Sbjct: 429 SHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDL-RVLSGSISERIVD--CIIR 485
Query: 452 ECIH---------------NP--VSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNI 494
+ P S +R G G +R+IV+ +D N
Sbjct: 486 LPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTG------VRVIVA-GTLD-INP 537
Query: 495 KKEY 498
+Y
Sbjct: 538 DDDY 541
Score = 54.7 bits (131), Expect = 6e-08
Identities = 65/410 (15%), Positives = 127/410 (30%), Gaps = 141/410 (34%)
Query: 10 TTYAQ--TAVCQIVGKSLRYLV------PPVFRKAQVDF---IHNP-------------- 44
TY + + ++L L+ VF + ++ + NP
Sbjct: 178 QTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQG-LNILEWLENPSNTPDKDYLLSIPI 236
Query: 45 ---------IAYY----------TKQLYRSMRGP-GTDDATLMRILISRSEIDLENIKRE 84
+A+Y +L ++G G + + I+ ++ E
Sbjct: 237 SCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETD-SWE----S 291
Query: 85 FERRYERTLKSAIEVGETEHRRSQVRFPPL--------YSIA---GHPVHILTFQG---- 129
F + + +G R +P S+ G P +L+
Sbjct: 292 FFVSVRKAITVLFFIG----VRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQE 347
Query: 130 --EPTIRRTNDPFNASEDVQ-ALR------------AAMKGLGTNETVIRQILTRRTNKQ 174
+ + +TN A + V+ +L ++ GL +R+ Q
Sbjct: 348 QVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLT---LRKAKAPSGLDQ 404
Query: 175 RLEILEYVFRKCNRNPFGPQSSSVVQLFAGHPVHILTFQGEPTIRRTNDPFNASEDVQAL 234
+R PF + F PV PF++ L
Sbjct: 405 ------------SRIPFSERKLKFSNRFL--PV--------------ASPFHSH----LL 432
Query: 235 RAAMKGLGTNETVIRQILTRRT---NKQRLEILEKYPIELNRDLLSDLKSELSGDF-EDL 290
A +I + L + N + ++I P+ D SDL+ LSG E +
Sbjct: 433 VPASD-------LINKDLVKNNVSFNAKDIQI----PVYDTFDG-SDLR-VLSGSISERI 479
Query: 291 VKALMKSPVDFMCSEIHRALTGLMFDANTLTEI-LVTKTNAE---IKEIV 336
V +++ PV + + +A L F + + ++T N + ++ IV
Sbjct: 480 VDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVRVIV 529
Score = 53.1 bits (127), Expect = 2e-07
Identities = 46/286 (16%), Positives = 84/286 (29%), Gaps = 92/286 (32%)
Query: 19 QIVG--KSLRYLVPPVFRKA--QVD--------F-I-----HNPIAYY----------TK 50
Q G L Y + + D F I +NP+ +
Sbjct: 1627 QEQGMGMDL-YKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIR 1685
Query: 51 QLYRSMRGPGTDDATLMRILISRSEIDLENIKREFERRYERTLKS------AI---EVGE 101
+ Y +M D L I + EI+ + F + L + A+ E
Sbjct: 1686 ENYSAMIFETIVDGKLKTEKIFK-EINEHSTSYTFRSE-KGLLSATQFTQPALTLMEKAA 1743
Query: 102 TEHRRSQVRFPPLYSIAGHPV----------HILTFQGEPTIR----R--------TNDP 139
E +S+ P + AGH + +++ E + R D
Sbjct: 1744 FEDLKSKGLIPADATFAGHSLGEYAALASLADVMSI--ESLVEVVFYRGMTMQVAVPRDE 1801
Query: 140 FNASE-DVQALRAAMKGLGTNETVIRQILTRRTNKQRLEILEYVFRKCNRNPFGPQSSSV 198
S + A+ ++ ++ ++ R K+ ++E V N N Q
Sbjct: 1802 LGRSNYGMIAINPGRVAASFSQEALQYVV-ERVGKRTGWLVEIV----NYNVENQQ---Y 1853
Query: 199 VQLFAGHP------VHILTFQGEPTIRRTNDPFNASEDVQALRAAM 238
V AG ++L F I D+ L+ ++
Sbjct: 1854 V--AAGDLRALDTVTNVLNFIKLQKI-----------DIIELQKSL 1886
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT
NEW YORK SGX research center for structural genomics,
nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum}
Length = 144
Score = 30.7 bits (70), Expect = 0.59
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 424 KVEKGRTIEQALKAELSGEL 443
K+E G T E AL EL+ EL
Sbjct: 43 KLEPGETPEAALVRELAEEL 62
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural
genomics consortium, BCR, CR associated substrate,
transferase; 2.18A {Homo sapiens}
Length = 406
Score = 30.9 bits (69), Expect = 1.2
Identities = 13/90 (14%), Positives = 33/90 (36%)
Query: 438 ELSGELLDLTLAIVECIHNPVSYFAKQLYRAMKGLGTDKQTLIRIIVSRSEIDLGNIKKE 497
LS L + + +S ++ + K Q L + + D+ +K +
Sbjct: 83 GLSRLLRQHAEDLNSGPLSKLSLLIRERQQLRKTYSEQWQQLQQELTKTHSQDIEKLKSQ 142
Query: 498 YERLFNKTLESHVKKKKKKNNNNNNNNNNK 527
Y L + ++ K ++ + + + +K
Sbjct: 143 YRALARDSAQAKRKYQEASKDKDRDKAKDK 172
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Length = 140
Score = 29.1 bits (66), Expect = 1.9
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 424 KVEKGRTIEQALKAELSGELLDLTLAIVECI 454
KVE + QAL EL E L + + E +
Sbjct: 43 KVEPDESQRQALVRELR-EELGIEATVGEYV 72
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase;
1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A*
3ffu_A*
Length = 153
Score = 29.2 bits (66), Expect = 2.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 424 KVEKGRTIEQALKAELSGEL 443
K+E G T E+AL EL+ EL
Sbjct: 56 KIENGETPEEALARELNEEL 75
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious
diseases, hydrol structural genomics; 2.10A {Bartonella
henselae}
Length = 158
Score = 28.9 bits (65), Expect = 2.2
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 424 KVEKGRTIEQALKAELSGELLDLTLAIVECIH 455
KVE+G T E +L EL E L + +
Sbjct: 64 KVEQGETPEASLIRELE-EELGVHVQADNLFP 94
>1izm_A Hypothetical protein HI0817; structural genomics, YGFB, structure 2
function project, S2F, unknown function; 1.95A
{Haemophilus influenzae} SCOP: a.199.1.1
Length = 184
Score = 29.2 bits (65), Expect = 2.3
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 286 DFEDLVKALMKSPVDFMCSEIHRALTGLM 314
D+ + L + + F +E+H L+GL+
Sbjct: 6 SHSDMNQQLKSAGIGFNATELHGFLSGLL 34
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN;
tetracenomycin, aromatase, taxifolin, dihyroquercet
helix-GRIP fold; HET: DQH; 1.67A {Streptomyces
glaucescens} PDB: 2rer_A 2res_A 2rez_A
Length = 169
Score = 28.8 bits (64), Expect = 2.6
Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 56 MRGPGTDDATLMRILISR-SEIDLENIKREFERRYERTLKSAIEVGETEHRRSQV 109
M+ D M ++ + ++E IK+ E R+ ++ V TE Q+
Sbjct: 114 MKPGAPFDNAHMTAHLNTTTRANMERIKKIIEDRHREGQRTPASVLPTELHAQQL 168
>2id6_A Transcriptional regulator, TETR family; 1.75A {Thermotoga maritima}
SCOP: a.4.1.9 a.121.1.1 PDB: 3ih2_A 3ih3_A 3ih4_A
1zkg_A* 2iek_A* 1z77_A*
Length = 202
Score = 29.0 bits (65), Expect = 3.0
Identities = 11/91 (12%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Query: 257 NKQRL--EILEKYPIELNRDLLSDLKSELSGDFEDLVKALMKSPVDFMCSEIHRALTGLM 314
NK+ L + +L ++ + L + D D ++ ++ +++ S H +
Sbjct: 48 NKEELYYQAYMSVTEKLQKEFENFLMKNRNRDIFDFMERWIEKKLEYSAS--HPEEADFL 105
Query: 315 FDANTLTEILVTKTNAEIKEIVQNYETLYKR 345
++ E L + ++++ + + +
Sbjct: 106 ITLVSVDEGLRKRILLDLEKSQRVFFDFVRE 136
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica
serovar typhimurium STR. unknown function; HET: PO4;
1.75A {Salmonella enterica subsp} PDB: 3n77_A
Length = 165
Score = 28.7 bits (64), Expect = 3.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 424 KVEKGRTIEQALKAELSGEL 443
VE G IE+AL+ E+ EL
Sbjct: 63 GVEPGERIEEALRREIREEL 82
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR
{Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A*
1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Length = 129
Score = 27.9 bits (63), Expect = 4.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 424 KVEKGRTIEQALKAELSGELLDLTLAIVE 452
K+E G T EQA+ EL E + +T
Sbjct: 39 KIEMGETPEQAVVRELQ-EEVGITPQHFS 66
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 28.0 bits (61), Expect = 4.7
Identities = 6/31 (19%), Positives = 13/31 (41%), Gaps = 5/31 (16%)
Query: 173 KQRLEILEYVFRKCNRNPFGPQSSSVVQLFA 203
KQ L+ L+ + + S+ + + A
Sbjct: 19 KQALKKLQASLK-----LYADDSAPALAIKA 44
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2,
protein structure INI NEW YORK SGX research center for
structural genomics; 2.00A {Bacteroides fragilis}
Length = 140
Score = 27.9 bits (63), Expect = 4.9
Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 424 KVEKGRTIEQALKAELSGELLDLTLAIVE 452
KVE+G ++++AL+ E+ E +D + + E
Sbjct: 42 KVEEGESLQEALQREIM-EEMDYVIEVGE 69
>3iqt_A Signal transduction histidine-protein kinase BARA; histidine
phosphotransfer domain, HTP, structural genomics,
protein structure initiative; HET: MSE BTB; 1.40A
{Escherichia coli}
Length = 123
Score = 27.5 bits (61), Expect = 5.0
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 270 ELNRDLLSDLKSELSGDFEDLVKALMKSPVDFMCSEIHR 308
+L RD+L L L + + L+ + + IH+
Sbjct: 29 DLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHK 67
>2hi3_A Homeodomain-only protein; transcription; NMR {Mus musculus} SCOP:
a.4.1.1
Length = 73
Score = 26.6 bits (59), Expect = 5.4
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 168 TRRTNKQRLEILEYVFRKCNRNP 190
+ T Q +EILEY F K N++P
Sbjct: 7 SGPTEDQ-VEILEYNFNKVNKHP 28
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta
domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa}
PDB: 1yul_A* 1yun_A*
Length = 242
Score = 28.1 bits (63), Expect = 6.8
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 12/40 (30%)
Query: 22 GKSLRYLVPP-VFRKAQVDFIHNPIAYYTKQLYRSMRGPG 60
G+S+R+LVP V +++I LYR+
Sbjct: 209 GRSVRFLVPDAV-----LNYIE------AHHLYRAPHLEH 237
>3bwt_A Protein PUF4; pumilio, RNA binding, HO endonuclease, transcription,
RNA binding protein; 2.69A {Saccharomyces cerevisiae}
PDB: 4dzs_A 3bx2_A 3bx3_A
Length = 333
Score = 28.2 bits (63), Expect = 7.7
Identities = 26/122 (21%), Positives = 50/122 (40%), Gaps = 17/122 (13%)
Query: 162 VIRQILTRRTNKQRLEILEYVFRKCNR---NPFGPQSSSVVQLFAGHPVHILTFQGEPTI 218
V+++ L T +Q + + + ++ +PFG + VVQ +I+T + E
Sbjct: 172 VLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFG---NYVVQ-------YIITKEAEKNK 221
Query: 219 RRTNDPFNASEDVQALRAAMKGLGTNETVIRQILTRRTNKQRL--EILEKYPIELNRDLL 276
+A+ ++ G+N VI +IL + + EIL + LL
Sbjct: 222 YDYTHKIVHLLKPRAIELSIHKFGSN--VIEKILKTAIVSEPMILEILNNGGETGIQSLL 279
Query: 277 SD 278
+D
Sbjct: 280 ND 281
>1uhs_A HOP, homeodomain only protein; structural genomics, cardiac
development, riken structural genomics/proteomics
initiative, RSGI, transcription; NMR {Mus musculus}
SCOP: a.4.1.1
Length = 72
Score = 25.8 bits (57), Expect = 9.2
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Query: 171 TNKQRLEILEYVFRKCNRNP 190
T Q +EILEY F K N++P
Sbjct: 9 TEDQ-VEILEYNFNKVNKHP 27
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.134 0.374
Gapped
Lambda K H
0.267 0.0639 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,984,481
Number of extensions: 499377
Number of successful extensions: 1719
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1502
Number of HSP's successfully gapped: 132
Length of query: 532
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 434
Effective length of database: 3,965,535
Effective search space: 1721042190
Effective search space used: 1721042190
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.1 bits)