BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1282
(487 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340715808|ref|XP_003396400.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Bombus terrestris]
Length = 607
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 151/202 (74%), Positives = 179/202 (88%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
H Q+DL ALGKL+LA+ CRSL+AV R+N+Q S++L+ RSYSADLRNLILYLLS +R+
Sbjct: 402 HYQQEDLIALGKLVLALACRSLLAVHRDNMQASLELVTRSYSADLRNLILYLLSNQARRS 461
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V DLMPMIGAR+YTQLDA QL D LENELSKE+ENGRLF+LLVKLGTINERP+LN++PT
Sbjct: 462 VTDLMPMIGARFYTQLDAAQLRSDVLENELSKELENGRLFKLLVKLGTINERPDLNMEPT 521
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
W+ETGDRYMLKLFRDY+ HQV DGRPWLDM+H+V CLNKLD+G+Q+K+CLMSRDEQS+L
Sbjct: 522 WAETGDRYMLKLFRDYVFHQVAADGRPWLDMAHVVSCLNKLDSGSQDKVCLMSRDEQSIL 581
Query: 294 VVSYAELKQCLDQSFHELSSSA 315
VVSYAEL+QCL+ SF EL SA
Sbjct: 582 VVSYAELRQCLETSFGELIQSA 603
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/155 (76%), Positives = 138/155 (89%)
Query: 323 LPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG 382
L LYLLS +R+V DLMPMIGAR+YTQLDA QL D LENELSKE+ENGRLF+LLVKLG
Sbjct: 449 LILYLLSNQARRSVTDLMPMIGARFYTQLDAAQLRSDVLENELSKELENGRLFKLLVKLG 508
Query: 383 TINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQE 442
TINERP+LN++PTW+ETGDRYMLKLFRDY+ HQV DGRPWLDM+H+V CLNKLD+G+Q+
Sbjct: 509 TINERPDLNMEPTWAETGDRYMLKLFRDYVFHQVAADGRPWLDMAHVVSCLNKLDSGSQD 568
Query: 443 KICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
K+CLMSRDEQS+LVVSYAEL+QCL+ SF EL SA
Sbjct: 569 KVCLMSRDEQSILVVSYAELRQCLETSFGELIQSA 603
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 19/122 (15%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
SQEN GGTTYFY ++ V G ++ A + GY ++PGTP H++ P
Sbjct: 84 SQENVGGTTYFYLGNAAADTVGTEEGTESIGNVGAGQI-----GY-VYPGTPAHLQPVKP 137
Query: 68 NAATVDH-------------SSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
+ + F++SEN+R +I KNALTL + FP+LP EVDNYH
Sbjct: 138 TKPVSSNSSSAPSTPPPQATTGFFVSENLRMDIVQKNALTLAQPDVVRFPDLPNEVDNYH 197
Query: 115 DL 116
+L
Sbjct: 198 EL 199
>gi|383864398|ref|XP_003707666.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Megachile rotundata]
Length = 606
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 152/202 (75%), Positives = 178/202 (88%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
H Q+DL ALGKL+LA+ CRSL+AV R+N+Q S++L+ARSYS DLRNLILYLLS +R+
Sbjct: 401 HYQQEDLIALGKLVLALACRSLLAVHRDNMQASLELVARSYSTDLRNLILYLLSNQARRS 460
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V DLMPMIGAR+YTQLDA QL D LENEL+KE+ENGRLF+LLVKL TINERPELN++PT
Sbjct: 461 VTDLMPMIGARFYTQLDAAQLRSDVLENELAKELENGRLFKLLVKLATINERPELNMEPT 520
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
W+ETGDRYMLKLFRDY+ HQV DGRPWLDM+H+V CLNKLD+G+Q+KICLMSRDEQSVL
Sbjct: 521 WAETGDRYMLKLFRDYVFHQVAADGRPWLDMAHVVSCLNKLDSGSQDKICLMSRDEQSVL 580
Query: 294 VVSYAELKQCLDQSFHELSSSA 315
VVSYAEL+QCL+ SF EL SA
Sbjct: 581 VVSYAELRQCLETSFGELVQSA 602
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 144/172 (83%)
Query: 306 QSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 365
Q+ EL + + T L LYLLS +R+V DLMPMIGAR+YTQLDA QL D LENEL
Sbjct: 431 QASLELVARSYSTDLRNLILYLLSNQARRSVTDLMPMIGARFYTQLDAAQLRSDVLENEL 490
Query: 366 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 425
+KE+ENGRLF+LLVKL TINERPELN++PTW+ETGDRYMLKLFRDY+ HQV DGRPWLD
Sbjct: 491 AKELENGRLFKLLVKLATINERPELNMEPTWAETGDRYMLKLFRDYVFHQVAADGRPWLD 550
Query: 426 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
M+H+V CLNKLD+G+Q+KICLMSRDEQSVLVVSYAEL+QCL+ SF EL SA
Sbjct: 551 MAHVVSCLNKLDSGSQDKICLMSRDEQSVLVVSYAELRQCLETSFGELVQSA 602
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 63/122 (51%), Gaps = 19/122 (15%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
SQEN GGTTYFY +S V G + A V GY ++PGTP H++ P
Sbjct: 83 SQENVGGTTYFYLGNTSADGVGVEEGTETIGTVGAGQV-----GY-VYPGTPAHLQPVKP 136
Query: 68 NAATVDHS-------------SFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
+S SF++SEN+R +I KNALTL + FP+LP EVDNYH
Sbjct: 137 TKPPSSNSSSAPSTPPPQATPSFFVSENLRMDILQKNALTLAQPDLVRFPDLPNEVDNYH 196
Query: 115 DL 116
+L
Sbjct: 197 EL 198
>gi|380019400|ref|XP_003693595.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Apis florea]
Length = 606
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/205 (74%), Positives = 179/205 (87%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
H Q+DL ALGKL+LA+ CRSL+AV R+N+Q S++L+ARSYS DLRNLILYLLS +++
Sbjct: 401 HYQQEDLIALGKLVLALACRSLLAVHRDNMQASLELVARSYSTDLRNLILYLLSNQARKS 460
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V DLMPMIGAR+YTQLDA QL D LENEL+KE+ENGRLF+LLVKL TINERPELN++PT
Sbjct: 461 VTDLMPMIGARFYTQLDAAQLRSDVLENELAKELENGRLFKLLVKLATINERPELNMEPT 520
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
W+ETGDRYMLKLFRDY+ HQV DGRPWLDM+H+V CLNKLD+G+Q+KICLMSRDEQSVL
Sbjct: 521 WAETGDRYMLKLFRDYVFHQVAADGRPWLDMAHVVSCLNKLDSGSQDKICLMSRDEQSVL 580
Query: 294 VVSYAELKQCLDQSFHELSSSASLT 318
VVSYAEL+QCL+ SF EL SA T
Sbjct: 581 VVSYAELRQCLETSFGELVQSAKET 605
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 145/175 (82%)
Query: 306 QSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 365
Q+ EL + + T L LYLLS +++V DLMPMIGAR+YTQLDA QL D LENEL
Sbjct: 431 QASLELVARSYSTDLRNLILYLLSNQARKSVTDLMPMIGARFYTQLDAAQLRSDVLENEL 490
Query: 366 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 425
+KE+ENGRLF+LLVKL TINERPELN++PTW+ETGDRYMLKLFRDY+ HQV DGRPWLD
Sbjct: 491 AKELENGRLFKLLVKLATINERPELNMEPTWAETGDRYMLKLFRDYVFHQVAADGRPWLD 550
Query: 426 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLT 480
M+H+V CLNKLD+G+Q+KICLMSRDEQSVLVVSYAEL+QCL+ SF EL SA T
Sbjct: 551 MAHVVSCLNKLDSGSQDKICLMSRDEQSVLVVSYAELRQCLETSFGELVQSAKET 605
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 62/129 (48%), Gaps = 34/129 (26%)
Query: 8 SQENFGGTTYFY-------QAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPP 60
SQEN GGTTYFY GTE G G + GY ++PGTP
Sbjct: 84 SQENVGGTTYFYLGNAVTDTGTEDGTETIGNVG-------------AGQIGY-VYPGTPA 129
Query: 61 HVRHKPPNAATVDHS-------------SFYMSENIRAEIQHKNALTLVSANPELFPELP 107
H++ P +S SF++SE++R +I KNALTL + FP+LP
Sbjct: 130 HLQPVKPTKPPSSNSSSAPSTPPPQAALSFFVSESLRMDILQKNALTLAQPDIVRFPDLP 189
Query: 108 LEVDNYHDL 116
EVDNYH+L
Sbjct: 190 NEVDNYHEL 198
>gi|66500005|ref|XP_623553.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Apis mellifera]
Length = 607
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/205 (74%), Positives = 179/205 (87%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
H Q+DL ALGKL+LA+ CRSL+AV R+N+Q S++L+ARSYS DLRNLILYLLS +++
Sbjct: 402 HYQQEDLIALGKLVLALACRSLLAVHRDNMQASLELVARSYSTDLRNLILYLLSNQARKS 461
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V DLMPMIGAR+YTQLDA QL D LENEL+KE+ENGRLF+LLVKL TINERPELN++PT
Sbjct: 462 VTDLMPMIGARFYTQLDAAQLRSDVLENELAKELENGRLFKLLVKLATINERPELNMEPT 521
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
W+ETGDRYMLKLFRDY+ HQV DGRPWLDM+H+V CLNKLD+G+Q+KICLMSRDEQSVL
Sbjct: 522 WAETGDRYMLKLFRDYVFHQVAADGRPWLDMAHVVSCLNKLDSGSQDKICLMSRDEQSVL 581
Query: 294 VVSYAELKQCLDQSFHELSSSASLT 318
VVSYAEL+QCL+ SF EL SA T
Sbjct: 582 VVSYAELRQCLETSFGELVQSAKET 606
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 145/175 (82%)
Query: 306 QSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 365
Q+ EL + + T L LYLLS +++V DLMPMIGAR+YTQLDA QL D LENEL
Sbjct: 432 QASLELVARSYSTDLRNLILYLLSNQARKSVTDLMPMIGARFYTQLDAAQLRSDVLENEL 491
Query: 366 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 425
+KE+ENGRLF+LLVKL TINERPELN++PTW+ETGDRYMLKLFRDY+ HQV DGRPWLD
Sbjct: 492 AKELENGRLFKLLVKLATINERPELNMEPTWAETGDRYMLKLFRDYVFHQVAADGRPWLD 551
Query: 426 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLT 480
M+H+V CLNKLD+G+Q+KICLMSRDEQSVLVVSYAEL+QCL+ SF EL SA T
Sbjct: 552 MAHVVSCLNKLDSGSQDKICLMSRDEQSVLVVSYAELRQCLETSFGELVQSAKET 606
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
SQEN GGTTYFY G V G G + + V +S GY ++PGTP H++ P
Sbjct: 84 SQENVGGTTYFYL----GNAVTDTVGTEDGTE-TIGNVGASQIGY-VYPGTPAHLQPVKP 137
Query: 68 NAATVDHS-------------SFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
+S SF++SE++R +I KNALTL + FP+LP EVDNYH
Sbjct: 138 TKPPSSNSSSAPSTPPPQAALSFFVSESLRMDILQKNALTLAQPDIVRFPDLPNEVDNYH 197
Query: 115 DL 116
+L
Sbjct: 198 EL 199
>gi|242022354|ref|XP_002431605.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516913|gb|EEB18867.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 612
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 148/206 (71%), Positives = 183/206 (88%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
H Q+DLTALGKL+LA++C+SL+AVQREN+QTS+DL+ R+YS+DL+NLI+YLL ++RT
Sbjct: 404 HYQQEDLTALGKLVLALSCKSLLAVQRENIQTSLDLVGRTYSSDLKNLIVYLLHNQKRRT 463
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V DLMPMIGAR+Y QL+ +Q + D +ENEL+KE++NGRL RLL KLGTINERPEL+LDP+
Sbjct: 464 VTDLMPMIGARFYAQLETIQTYADDIENELTKEIDNGRLCRLLAKLGTINERPELSLDPS 523
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETGDRYMLKLFRDY+ HQV EDGRPWL+M+HIV CLNKLD+G+ EKICLMSRDEQSVL
Sbjct: 524 WSETGDRYMLKLFRDYIFHQVTEDGRPWLEMAHIVQCLNKLDSGSLEKICLMSRDEQSVL 583
Query: 294 VVSYAELKQCLDQSFHELSSSASLTP 319
VVSY ELK CL+QSF+E+ +SA+ P
Sbjct: 584 VVSYEELKHCLEQSFNEVVTSATEKP 609
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 149/192 (77%), Gaps = 5/192 (2%)
Query: 290 QSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYT 349
+S+L V ++ LD SS L +YLL ++RTV DLMPMIGAR+Y
Sbjct: 423 KSLLAVQRENIQTSLDLVGRTYSSDLK-----NLIVYLLHNQKRRTVTDLMPMIGARFYA 477
Query: 350 QLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFR 409
QL+ +Q + D +ENEL+KE++NGRL RLL KLGTINERPEL+LDP+WSETGDRYMLKLFR
Sbjct: 478 QLETIQTYADDIENELTKEIDNGRLCRLLAKLGTINERPELSLDPSWSETGDRYMLKLFR 537
Query: 410 DYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQS 469
DY+ HQV EDGRPWL+M+HIV CLNKLD+G+ EKICLMSRDEQSVLVVSY ELK CL+QS
Sbjct: 538 DYIFHQVTEDGRPWLEMAHIVQCLNKLDSGSLEKICLMSRDEQSVLVVSYEELKHCLEQS 597
Query: 470 FHELSSSASLTP 481
F+E+ +SA+ P
Sbjct: 598 FNEVVTSATEKP 609
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 21/111 (18%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
+QEN GGTTYFY A + +E SS G T G + H
Sbjct: 112 NQENLGGTTYFYPATTVASE-------------------SSSSGVTQFQGYAGNHSHLNQ 152
Query: 68 NAATVDHSS--FYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
++ SS FY+S++IR+EI K+AL ++ +P L+PELP VDNYH+L
Sbjct: 153 EETSLISSSPSFYVSDSIRSEILEKSALIMLQPDPTLYPELPESVDNYHEL 203
>gi|350418057|ref|XP_003491713.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Bombus impatiens]
Length = 607
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 147/201 (73%), Positives = 178/201 (88%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
H Q+DL ALGKL+LA+ CRSL++V R+N+Q S++L+ARSYSADLRNLILYLLS +R+
Sbjct: 402 HYQQEDLIALGKLVLALACRSLLSVHRDNMQASLELVARSYSADLRNLILYLLSNQARRS 461
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V DLMPMIGAR+YTQLDA QL D LENEL+KE+ENGRLF+LLVKL TINERP+LN++PT
Sbjct: 462 VTDLMPMIGARFYTQLDAAQLKSDILENELAKELENGRLFKLLVKLSTINERPDLNMEPT 521
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
W+ETGDRYMLKLFRDY+ HQV DGRPWLDM+H++ CLNKLD+G+Q+K+CLMSRDEQS+L
Sbjct: 522 WAETGDRYMLKLFRDYVFHQVAADGRPWLDMAHVISCLNKLDSGSQDKVCLMSRDEQSIL 581
Query: 294 VVSYAELKQCLDQSFHELSSS 314
VVSYAEL+QCL+ SF EL S
Sbjct: 582 VVSYAELRQCLETSFGELVQS 602
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 136/154 (88%)
Query: 323 LPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG 382
L LYLLS +R+V DLMPMIGAR+YTQLDA QL D LENEL+KE+ENGRLF+LLVKL
Sbjct: 449 LILYLLSNQARRSVTDLMPMIGARFYTQLDAAQLKSDILENELAKELENGRLFKLLVKLS 508
Query: 383 TINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQE 442
TINERP+LN++PTW+ETGDRYMLKLFRDY+ HQV DGRPWLDM+H++ CLNKLD+G+Q+
Sbjct: 509 TINERPDLNMEPTWAETGDRYMLKLFRDYVFHQVAADGRPWLDMAHVISCLNKLDSGSQD 568
Query: 443 KICLMSRDEQSVLVVSYAELKQCLDQSFHELSSS 476
K+CLMSRDEQS+LVVSYAEL+QCL+ SF EL S
Sbjct: 569 KVCLMSRDEQSILVVSYAELRQCLETSFGELVQS 602
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 19/122 (15%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
SQEN GGTTYFY G A G G + + V + GY ++PGTP H++ P
Sbjct: 84 SQENVGGTTYFYL----GNAAADAVGTEEGTE-TIGNVGAGQIGY-VYPGTPAHLQPVKP 137
Query: 68 NAATVDH-------------SSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
+ + F++SE++R +I KNALTL + FP+LP EVDNYH
Sbjct: 138 TKPVSSNSSSAPSTPPPQATTGFFVSESLRMDIVQKNALTLAQPDVVRFPDLPNEVDNYH 197
Query: 115 DL 116
+L
Sbjct: 198 EL 199
>gi|332025542|gb|EGI65705.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Acromyrmex
echinatior]
Length = 662
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 148/199 (74%), Positives = 175/199 (87%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
H Q+DL ALGKL+LA+ CRSL+AV R+N+ SI+L+ RSYS DLRNLILYLLS +++
Sbjct: 403 HYQQEDLVALGKLVLALACRSLIAVHRDNMSASIELITRSYSTDLRNLILYLLSNQSRKS 462
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V DLMPMIGAR+YTQLDA QL D LENEL+KE+ENGRLF+LLVKL TINERPELN++PT
Sbjct: 463 VTDLMPMIGARFYTQLDAAQLRLDVLENELAKELENGRLFKLLVKLATINERPELNMEPT 522
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
W+ETGDRYMLKLFRDY+ HQV DGRPWLD++H+V CLNKLD+G+Q+KICLMSRDEQSVL
Sbjct: 523 WAETGDRYMLKLFRDYVFHQVTADGRPWLDLAHVVSCLNKLDSGSQDKICLMSRDEQSVL 582
Query: 294 VVSYAELKQCLDQSFHELS 312
VVSYAEL+QCL+ SF ELS
Sbjct: 583 VVSYAELRQCLETSFDELS 601
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 141/165 (85%)
Query: 310 ELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEM 369
EL + + T L LYLLS +++V DLMPMIGAR+YTQLDA QL D LENEL+KE+
Sbjct: 437 ELITRSYSTDLRNLILYLLSNQSRKSVTDLMPMIGARFYTQLDAAQLRLDVLENELAKEL 496
Query: 370 ENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHI 429
ENGRLF+LLVKL TINERPELN++PTW+ETGDRYMLKLFRDY+ HQV DGRPWLD++H+
Sbjct: 497 ENGRLFKLLVKLATINERPELNMEPTWAETGDRYMLKLFRDYVFHQVTADGRPWLDLAHV 556
Query: 430 VHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
V CLNKLD+G+Q+KICLMSRDEQSVLVVSYAEL+QCL+ SF ELS
Sbjct: 557 VSCLNKLDSGSQDKICLMSRDEQSVLVVSYAELRQCLETSFDELS 601
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 65/126 (51%), Gaps = 27/126 (21%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVR---- 63
SQEN GGTTYFY +S V G G + P V + GY ++PGTP H++
Sbjct: 85 SQENVGGTTYFYFGNTSSDVV----GSEDGTEAIGP-VATGQIGY-VYPGTPSHLQPVKT 138
Query: 64 -------------HKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEV 110
PP A SF++SEN+R +I KNALTL + FP+LP EV
Sbjct: 139 AKPPSSNNSSAPSTPPPQVA----PSFFVSENLRLDILQKNALTLAQPDIVRFPDLPNEV 194
Query: 111 DNYHDL 116
DNYH+L
Sbjct: 195 DNYHEL 200
>gi|307213398|gb|EFN88834.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Harpegnathos
saltator]
Length = 609
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 151/199 (75%), Positives = 173/199 (86%), Gaps = 1/199 (0%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH-QKR 172
H Q+DL ALGKL+LA+ CRSL+AV R+N+ SIDL+ RSYSADLRNLILYLLS ++R
Sbjct: 403 HYQQEDLVALGKLVLALACRSLIAVHRDNMSASIDLITRSYSADLRNLILYLLSSQDRRR 462
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
TV DLMPMIGAR+YTQLDA QL D LENEL+KE+ENGRLFRLLVKL TINERPEL++DP
Sbjct: 463 TVTDLMPMIGARFYTQLDAAQLRSDVLENELAKELENGRLFRLLVKLATINERPELSMDP 522
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
TW+ETGDRYMLKLFRDY+ HQV DGRPWLDM+H+V CLNKLD+G+ +KICLMSRDEQ V
Sbjct: 523 TWAETGDRYMLKLFRDYVFHQVTADGRPWLDMAHVVACLNKLDSGSSDKICLMSRDEQCV 582
Query: 293 LVVSYAELKQCLDQSFHEL 311
LVVSY EL+Q LDQSF EL
Sbjct: 583 LVVSYVELRQNLDQSFAEL 601
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 118/152 (77%), Positives = 133/152 (87%), Gaps = 1/152 (0%)
Query: 323 LPLYLLSVH-QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLLS ++RTV DLMPMIGAR+YTQLDA QL D LENEL+KE+ENGRLFRLLVKL
Sbjct: 450 LILYLLSSQDRRRTVTDLMPMIGARFYTQLDAAQLRSDVLENELAKELENGRLFRLLVKL 509
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
TINERPEL++DPTW+ETGDRYMLKLFRDY+ HQV DGRPWLDM+H+V CLNKLD+G+
Sbjct: 510 ATINERPELSMDPTWAETGDRYMLKLFRDYVFHQVTADGRPWLDMAHVVACLNKLDSGSS 569
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
+KICLMSRDEQ VLVVSY EL+Q LDQSF EL
Sbjct: 570 DKICLMSRDEQCVLVVSYVELRQNLDQSFAEL 601
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 27/126 (21%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVR---- 63
SQEN GGT YFY ++ + V G G + A + GY ++PGTP H++
Sbjct: 85 SQENVGGTMYFYVGNATTSTVTGEDGSEAIGQVGAGQI-----GY-VYPGTPSHLQPVKA 138
Query: 64 -------------HKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEV 110
PP AA SF++SE++R +I KNALTL + FP+LP EV
Sbjct: 139 PKPPSSNNSSAPSTPPPQAA----PSFFVSESLRLDILQKNALTLAQPDIVRFPDLPNEV 194
Query: 111 DNYHDL 116
DNYH+L
Sbjct: 195 DNYHEL 200
>gi|345494958|ref|XP_001604971.2| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Nasonia vitripennis]
Length = 613
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 145/201 (72%), Positives = 175/201 (87%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
H Q+DL ALGKL+LA+ CRSL+AV R+N+Q S++L+AR+YS DLRNLILYLLS +R+
Sbjct: 404 HYQQEDLIALGKLVLALACRSLLAVHRDNMQASLELVARTYSTDLRNLILYLLSNQARRS 463
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V DLMPMIGAR+YTQLDA QL D LENEL+KE+ENGRLFRL+VKL TINERPELNLDP
Sbjct: 464 VTDLMPMIGARFYTQLDAAQLCSDVLENELTKELENGRLFRLIVKLSTINERPELNLDPQ 523
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETGDRYMLKLFRDY+ HQV DGRPWLD++H+V CLNKLD G+ +KICL+SRDEQSVL
Sbjct: 524 WSETGDRYMLKLFRDYVFHQVTADGRPWLDLAHVVSCLNKLDVGSPDKICLISRDEQSVL 583
Query: 294 VVSYAELKQCLDQSFHELSSS 314
+VSYAEL+ C++ SF+EL+ +
Sbjct: 584 IVSYAELRHCMETSFNELAQA 604
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 118/171 (69%), Positives = 140/171 (81%)
Query: 306 QSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 365
Q+ EL + T L LYLLS +R+V DLMPMIGAR+YTQLDA QL D LENEL
Sbjct: 434 QASLELVARTYSTDLRNLILYLLSNQARRSVTDLMPMIGARFYTQLDAAQLCSDVLENEL 493
Query: 366 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 425
+KE+ENGRLFRL+VKL TINERPELNLDP WSETGDRYMLKLFRDY+ HQV DGRPWLD
Sbjct: 494 TKELENGRLFRLIVKLSTINERPELNLDPQWSETGDRYMLKLFRDYVFHQVTADGRPWLD 553
Query: 426 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSS 476
++H+V CLNKLD G+ +KICL+SRDEQSVL+VSYAEL+ C++ SF+EL+ +
Sbjct: 554 LAHVVSCLNKLDVGSPDKICLISRDEQSVLIVSYAELRHCMETSFNELAQA 604
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 67/125 (53%), Gaps = 22/125 (17%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
SQEN GGTTYFY A +S + AG D G + P ++PGTP + +P
Sbjct: 84 SQENVGGTTYFY-AQNSSVDSGITAGE---DGAEIVGTVEPLPLAYVYPGTPSFL--QPF 137
Query: 68 NAATVDHS----------------SFYMSENIRAEIQHKNALTLVSANPELFPELPLEVD 111
AAT + S SF+++E++R EI KNALTL A+P +P+LP EV+
Sbjct: 138 KAATANKSASNNTESHMPPASQALSFFVNESLRVEILQKNALTLAQADPVQYPDLPPEVE 197
Query: 112 NYHDL 116
NY DL
Sbjct: 198 NYQDL 202
>gi|322787097|gb|EFZ13318.1| hypothetical protein SINV_05900 [Solenopsis invicta]
Length = 625
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 147/201 (73%), Positives = 174/201 (86%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
H Q+DL ALGKL+LA+ CRSL+AV R+N+ SI+L+ RSYS DLRNLILYLLS +++
Sbjct: 420 HYQQEDLVALGKLVLALACRSLIAVHRDNMSASIELITRSYSTDLRNLILYLLSNQPRKS 479
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V DLMPMIGAR+YTQLDA QL D ENEL+KE+ENGRLF+LLVKL TINERPELN++PT
Sbjct: 480 VTDLMPMIGARFYTQLDAAQLRLDVYENELAKELENGRLFKLLVKLATINERPELNMEPT 539
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
W+ETGDRYMLKLFRDY+ HQV DGRPWLD++H+V CLNKLD+G+Q+KICLMSRDEQSVL
Sbjct: 540 WAETGDRYMLKLFRDYVFHQVTADGRPWLDLAHVVACLNKLDSGSQDKICLMSRDEQSVL 599
Query: 294 VVSYAELKQCLDQSFHELSSS 314
VVSYAEL+QCL+ SF EL S
Sbjct: 600 VVSYAELRQCLETSFGELVQS 620
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/167 (71%), Positives = 140/167 (83%)
Query: 310 ELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEM 369
EL + + T L LYLLS +++V DLMPMIGAR+YTQLDA QL D ENEL+KE+
Sbjct: 454 ELITRSYSTDLRNLILYLLSNQPRKSVTDLMPMIGARFYTQLDAAQLRLDVYENELAKEL 513
Query: 370 ENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHI 429
ENGRLF+LLVKL TINERPELN++PTW+ETGDRYMLKLFRDY+ HQV DGRPWLD++H+
Sbjct: 514 ENGRLFKLLVKLATINERPELNMEPTWAETGDRYMLKLFRDYVFHQVTADGRPWLDLAHV 573
Query: 430 VHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSS 476
V CLNKLD+G+Q+KICLMSRDEQSVLVVSYAEL+QCL+ SF EL S
Sbjct: 574 VACLNKLDSGSQDKICLMSRDEQSVLVVSYAELRQCLETSFGELVQS 620
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 63/126 (50%), Gaps = 27/126 (21%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRH--- 64
SQEN GGTTYFY + G A G G + P V + GY ++PGTP H++
Sbjct: 85 SQENVGGTTYFYFGNAGG----DAVGTEDGTEAIGP-VATGQIGY-VYPGTPSHLQSVKP 138
Query: 65 --------------KPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEV 110
PP AA SF++ E++R EI KN L L + FP+LP EV
Sbjct: 139 AKPPSSNNSSAPSTPPPQAA----PSFFVGESLRLEILQKNGLILAQPDIVRFPDLPNEV 194
Query: 111 DNYHDL 116
DNYH+L
Sbjct: 195 DNYHEL 200
>gi|157127083|ref|XP_001654795.1| hypothetical protein AaeL_AAEL000262 [Aedes aegypti]
gi|108884500|gb|EAT48725.1| AAEL000262-PA [Aedes aegypti]
Length = 759
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 179/211 (84%), Gaps = 1/211 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL V N+H QDDLTA GKLILA+ CRSL +VQR+ +Q SI+L++R YS+DLRN+ILYLL
Sbjct: 550 PLTVVNHHQ-QDDLTAFGKLILALACRSLQSVQRDQIQNSIELISRHYSSDLRNIILYLL 608
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
S +R+V ++MPMIGAR+Y QLDA+Q D E+EL++EMENGRL+RLLVKLGT+NERP
Sbjct: 609 SSSNRRSVTEIMPMIGARFYVQLDALQSQCDIQEDELAREMENGRLYRLLVKLGTVNERP 668
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
ELNLD TWSETGDRYMLKLFRDYL H V EDGRPWL+ SHIV CLNKLDAGT EK+ LMS
Sbjct: 669 ELNLDVTWSETGDRYMLKLFRDYLFHTVTEDGRPWLNQSHIVQCLNKLDAGTVEKVQLMS 728
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSASL 317
RDEQSVLVV+YAELK CL+Q+F EL ++ ++
Sbjct: 729 RDEQSVLVVTYAELKHCLEQAFSELVAATTV 759
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/155 (72%), Positives = 133/155 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
LYLLS +R+V ++MPMIGAR+Y QLDA+Q D E+EL++EMENGRL+RLLVKLGT+
Sbjct: 605 LYLLSSSNRRSVTEIMPMIGARFYVQLDALQSQCDIQEDELAREMENGRLYRLLVKLGTV 664
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERPELNLD TWSETGDRYMLKLFRDYL H V EDGRPWL+ SHIV CLNKLDAGT EK+
Sbjct: 665 NERPELNLDVTWSETGDRYMLKLFRDYLFHTVTEDGRPWLNQSHIVQCLNKLDAGTVEKV 724
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASL 479
LMSRDEQSVLVV+YAELK CL+Q+F EL ++ ++
Sbjct: 725 QLMSRDEQSVLVVTYAELKHCLEQAFSELVAATTV 759
>gi|189235529|ref|XP_972356.2| PREDICTED: similar to PAB-dependent poly(A)-specific ribonuclease
subunit 3 (hPan3) [Tribolium castaneum]
gi|270003108|gb|EEZ99555.1| hypothetical protein TcasGA2_TC000137 [Tribolium castaneum]
Length = 643
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 142/198 (71%), Positives = 175/198 (88%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
H Q+DLTALGKL+LA+ C+S +AVQREN+ T++D+++RSY++DLRNLI+YLLS Q+++
Sbjct: 427 HYQQEDLTALGKLVLALACKSTVAVQRENISTAVDIISRSYTSDLRNLIMYLLSPQQRKS 486
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ DLMPMIGAR+YTQ+D + + + LE ELSKE+ENGRLFRL+ KLGTINERPELN+D
Sbjct: 487 ITDLMPMIGARFYTQMDNLHSYIEVLEYELSKEIENGRLFRLMAKLGTINERPELNMDGA 546
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
W+ETGDRYMLKLFRDY+ HQV EDGRPW+DM+HIV CLNKLDAG EKICLMSRDEQS+L
Sbjct: 547 WAETGDRYMLKLFRDYVFHQVTEDGRPWVDMAHIVQCLNKLDAGVPEKICLMSRDEQSML 606
Query: 294 VVSYAELKQCLDQSFHEL 311
VVSYAELK CL+QSFHE+
Sbjct: 607 VVSYAELKHCLEQSFHEI 624
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/151 (74%), Positives = 132/151 (87%)
Query: 323 LPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG 382
L +YLLS Q++++ DLMPMIGAR+YTQ+D + + + LE ELSKE+ENGRLFRL+ KLG
Sbjct: 474 LIMYLLSPQQRKSITDLMPMIGARFYTQMDNLHSYIEVLEYELSKEIENGRLFRLMAKLG 533
Query: 383 TINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQE 442
TINERPELN+D W+ETGDRYMLKLFRDY+ HQV EDGRPW+DM+HIV CLNKLDAG E
Sbjct: 534 TINERPELNMDGAWAETGDRYMLKLFRDYVFHQVTEDGRPWVDMAHIVQCLNKLDAGVPE 593
Query: 443 KICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
KICLMSRDEQS+LVVSYAELK CL+QSFHE+
Sbjct: 594 KICLMSRDEQSMLVVSYAELKHCLEQSFHEI 624
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 17/108 (15%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
QEN GGTTYFY P + D++ L+S Y ++PGTP H+ +
Sbjct: 136 QENVGGTTYFY---------PTTSETCHATDVAVNSNLTS--DYNVYPGTPNHIT----S 180
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
+SF++S++++ E+ ++NALTL+ AN + + +LP +V+NYH+L
Sbjct: 181 LKAKQGASFFISKDLQMELMNRNALTLMQANQQ-YADLP-QVENYHEL 226
>gi|307188332|gb|EFN73107.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Camponotus
floridanus]
Length = 608
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 145/201 (72%), Positives = 174/201 (86%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
H Q+DL ALGKL+LA+ CRSL+AV R+N+ SI+L+ RSYS DLRNLILYLLS +++
Sbjct: 403 HYQQEDLVALGKLVLALACRSLIAVHRDNMSASIELITRSYSTDLRNLILYLLSSQPRKS 462
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V DLMPMIGAR+YTQLD Q+ D LENEL+KE+ENGRLF+LLVK+ TINERPELN++PT
Sbjct: 463 VTDLMPMIGARFYTQLDTAQVQLDILENELAKELENGRLFKLLVKVATINERPELNMEPT 522
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
W+ETGDRYMLKLFRDY+ HQV DGRPWLD++H+V CLNKLD+G+Q+KICLMSRDEQSVL
Sbjct: 523 WAETGDRYMLKLFRDYVFHQVTADGRPWLDLAHVVACLNKLDSGSQDKICLMSRDEQSVL 582
Query: 294 VVSYAELKQCLDQSFHELSSS 314
VVSYAEL+QCL+ SF EL S
Sbjct: 583 VVSYAELRQCLETSFGELVQS 603
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/167 (70%), Positives = 140/167 (83%)
Query: 310 ELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEM 369
EL + + T L LYLLS +++V DLMPMIGAR+YTQLD Q+ D LENEL+KE+
Sbjct: 437 ELITRSYSTDLRNLILYLLSSQPRKSVTDLMPMIGARFYTQLDTAQVQLDILENELAKEL 496
Query: 370 ENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHI 429
ENGRLF+LLVK+ TINERPELN++PTW+ETGDRYMLKLFRDY+ HQV DGRPWLD++H+
Sbjct: 497 ENGRLFKLLVKVATINERPELNMEPTWAETGDRYMLKLFRDYVFHQVTADGRPWLDLAHV 556
Query: 430 VHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSS 476
V CLNKLD+G+Q+KICLMSRDEQSVLVVSYAEL+QCL+ SF EL S
Sbjct: 557 VACLNKLDSGSQDKICLMSRDEQSVLVVSYAELRQCLETSFGELVQS 603
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 64/129 (49%), Gaps = 33/129 (25%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLS---APGVLSSPPGYTMHPGTPPHVR- 63
SQEN GGTTYFY G A G G + APG + GY ++PGTP H++
Sbjct: 85 SQENVGGTTYFY----FGNATSDAVGTEDGTEAIGHIAPGQI----GY-VYPGTPSHLQP 135
Query: 64 ----------------HKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELP 107
PP A SF++SE++R +I KN LTL + FP+LP
Sbjct: 136 VKPTKPPSSNNSSAPSTPPPQVA----PSFFISESLRLDILQKNVLTLAQPDVVRFPDLP 191
Query: 108 LEVDNYHDL 116
EVDNYH+L
Sbjct: 192 NEVDNYHEL 200
>gi|328710553|ref|XP_001946023.2| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Acyrthosiphon pisum]
Length = 596
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 175/203 (86%), Gaps = 1/203 (0%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
H Q+DLT GKL+LA+ CRSL+AV ++NL TSIDLMARSYS+D+RN+I YLLS Q+R
Sbjct: 387 HFQQEDLTDFGKLLLALACRSLIAVHQDNLATSIDLMARSYSSDIRNIIRYLLST-QRRH 445
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ +LMPMIGAR+YTQLDA Q H D+LENELSKEMENGRLFRLLVKLG+INERPE NLDP
Sbjct: 446 ITELMPMIGARFYTQLDAAQNHSDNLENELSKEMENGRLFRLLVKLGSINERPEFNLDPA 505
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETGDRYMLKLFRDYL HQV EDGRPWLDMSHIV LNKLD+G+ + ICL SRDE+++L
Sbjct: 506 WSETGDRYMLKLFRDYLFHQVTEDGRPWLDMSHIVQTLNKLDSGSSDTICLYSRDEKTIL 565
Query: 294 VVSYAELKQCLDQSFHELSSSAS 316
VVSY ELK CL+QS+ E++S A+
Sbjct: 566 VVSYQELKHCLEQSYCEIASVAA 588
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/153 (75%), Positives = 133/153 (86%), Gaps = 1/153 (0%)
Query: 326 YLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 385
YLLS Q+R + +LMPMIGAR+YTQLDA Q H D+LENELSKEMENGRLFRLLVKLG+IN
Sbjct: 437 YLLST-QRRHITELMPMIGARFYTQLDAAQNHSDNLENELSKEMENGRLFRLLVKLGSIN 495
Query: 386 ERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKIC 445
ERPE NLDP WSETGDRYMLKLFRDYL HQV EDGRPWLDMSHIV LNKLD+G+ + IC
Sbjct: 496 ERPEFNLDPAWSETGDRYMLKLFRDYLFHQVTEDGRPWLDMSHIVQTLNKLDSGSSDTIC 555
Query: 446 LMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
L SRDE+++LVVSY ELK CL+QS+ E++S A+
Sbjct: 556 LYSRDEKTILVVSYQELKHCLEQSYCEIASVAA 588
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
Query: 5 ILCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRH 64
I Q+N GTTYFY ++G+ P + P GY P
Sbjct: 95 IQAYQKNVNGTTYFYPPDTNGSNQPNG------------NIFDDPSGYLPMPSV------ 136
Query: 65 KPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
+ P SS Y +++R ++ H+NAL++ S + + +P+LP +++YHD+
Sbjct: 137 ESPT------SSLYAQDDLRRDLLHRNALSMASPDSDRWPDLPETIEDYHDV 182
>gi|195374610|ref|XP_002046097.1| GJ12722 [Drosophila virilis]
gi|194153255|gb|EDW68439.1| GJ12722 [Drosophila virilis]
Length = 823
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 143/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 614 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 672
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 673 TTNNRRSVTDLMPMIGARFYTQLDALQAQVDKQEDELAKEMENGRLYRILVKLNSINERP 732
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRD+L H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 733 DFNLDCTWSETGDRYMLKLFRDFLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 792
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 793 RDEQSVLIVSYAELKNCLENAFSELMSSAA 822
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/154 (70%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 669 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQAQVDKQEDELAKEMENGRLYRILVKLNSI 728
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRD+L H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 729 NERPDFNLDCTWSETGDRYMLKLFRDFLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 788
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 789 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 822
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 9 QENFGGTTYFYQAPSSGTEVP----------GAAGPAPGDDLSAPGVLSSPPGYTMHPGT 58
QEN GGT YFY ++ P A PA ++A LS+ P ++ G
Sbjct: 299 QENVGGTIYFYPTANAPNNQPVVNSVVVDAAHPAHPAHHGVVNAVAPLSAVPSQLLYAG- 357
Query: 59 PPHVRHKPPNAA------TVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEV 110
HV P + T S+F+M + +R++I +N ++ ++ A LPLEV
Sbjct: 358 --HVYPGPASNVIAMQPKTQLESAFFMPDEMRSDILARNEISNLIMDAAEAAQHALPLEV 415
Query: 111 DNYHDL 116
DNYH L
Sbjct: 416 DNYHAL 421
>gi|195587348|ref|XP_002083427.1| GD13726 [Drosophila simulans]
gi|194195436|gb|EDX09012.1| GD13726 [Drosophila simulans]
Length = 786
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 577 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 635
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 636 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 695
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 696 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 755
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 756 RDEQSVLIVSYAELKNCLENAFSELMSSAA 785
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 632 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSI 691
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 692 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 751
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 752 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 785
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 9 QENFGGTTYFYQAPSSGTEVP--------GAAGPAPGDDLSAPGVLSSPPG--YTMH--P 56
QEN GGT YFY ++ P G G AP P YT H P
Sbjct: 265 QENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPAAMMYTGHVYP 324
Query: 57 GTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDNYH 114
G +V P T+ S+F+M + +R E+ +N ++ ++ A LPLEV+NYH
Sbjct: 325 GPSSNVVTMQPK--TLLESAFFMPDEMRTEVLARNEISNLIMDAAEAAQHALPLEVENYH 382
Query: 115 DL 116
L
Sbjct: 383 AL 384
>gi|24656400|ref|NP_728801.1| CG11486, isoform L [Drosophila melanogaster]
gi|161080919|ref|NP_001097487.1| CG11486, isoform P [Drosophila melanogaster]
gi|442629867|ref|NP_728803.2| CG11486, isoform R [Drosophila melanogaster]
gi|23092860|gb|AAN11526.1| CG11486, isoform L [Drosophila melanogaster]
gi|158028418|gb|ABW08447.1| CG11486, isoform P [Drosophila melanogaster]
gi|440215228|gb|AAN11528.2| CG11486, isoform R [Drosophila melanogaster]
Length = 757
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 548 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 606
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 607 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 666
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 667 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 726
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 727 RDEQSVLIVSYAELKNCLENAFSELMSSAA 756
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 603 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSI 662
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 663 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 722
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 723 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 756
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 9 QENFGGTTYFYQAPSSGTEVP--------GAAGPAPGDDLSAPGVLSSPPG--YTMH--P 56
QEN GGT YFY ++ P G G AP P YT H P
Sbjct: 236 QENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPAAMMYTGHVYP 295
Query: 57 GTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDNYH 114
G +V P T+ S+F+M + +RAE+ +N ++ ++ A LPLEV+NYH
Sbjct: 296 GPSSNVVTMQPK--TLLESAFFMPDEMRAEVLARNEISNLIMDAAEAAQHALPLEVENYH 353
Query: 115 DL 116
L
Sbjct: 354 AL 355
>gi|24656382|ref|NP_728797.1| CG11486, isoform J [Drosophila melanogaster]
gi|24656385|ref|NP_728798.1| CG11486, isoform K [Drosophila melanogaster]
gi|24656390|ref|NP_728799.1| CG11486, isoform M [Drosophila melanogaster]
gi|24656395|ref|NP_728800.1| CG11486, isoform N [Drosophila melanogaster]
gi|45552911|ref|NP_995982.1| CG11486, isoform H [Drosophila melanogaster]
gi|45552913|ref|NP_995983.1| CG11486, isoform F [Drosophila melanogaster]
gi|161080921|ref|NP_001097488.1| CG11486, isoform Q [Drosophila melanogaster]
gi|23092856|gb|AAN11522.1| CG11486, isoform J [Drosophila melanogaster]
gi|23092857|gb|AAN11523.1| CG11486, isoform K [Drosophila melanogaster]
gi|23092858|gb|AAN11524.1| CG11486, isoform M [Drosophila melanogaster]
gi|23092859|gb|AAN11525.1| CG11486, isoform N [Drosophila melanogaster]
gi|45445773|gb|AAS64952.1| CG11486, isoform F [Drosophila melanogaster]
gi|45445774|gb|AAS64953.1| CG11486, isoform H [Drosophila melanogaster]
gi|158028419|gb|ABW08448.1| CG11486, isoform Q [Drosophila melanogaster]
gi|323301234|gb|ADX35959.1| RE16947p [Drosophila melanogaster]
Length = 788
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 579 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 637
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 638 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 697
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 698 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 757
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 758 RDEQSVLIVSYAELKNCLENAFSELMSSAA 787
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 634 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSI 693
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 694 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 753
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 754 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 787
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 9 QENFGGTTYFYQAPSSGTEVP--------GAAGPAPGDDLSAPGVLSSPPG--YTMH--P 56
QEN GGT YFY ++ P G G AP P YT H P
Sbjct: 267 QENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPAAMMYTGHVYP 326
Query: 57 GTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDNYH 114
G +V P T+ S+F+M + +RAE+ +N ++ ++ A LPLEV+NYH
Sbjct: 327 GPSSNVVTMQPK--TLLESAFFMPDEMRAEVLARNEISNLIMDAAEAAQHALPLEVENYH 384
Query: 115 DL 116
L
Sbjct: 385 AL 386
>gi|45551507|ref|NP_728802.2| CG11486, isoform C [Drosophila melanogaster]
gi|45445775|gb|AAF47713.3| CG11486, isoform C [Drosophila melanogaster]
Length = 780
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 571 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 629
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 630 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 689
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 690 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 749
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 750 RDEQSVLIVSYAELKNCLENAFSELMSSAA 779
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 626 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSI 685
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 686 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 745
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 746 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 779
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 9 QENFGGTTYFYQAPSSGTEVP--------GAAGPAPGDDLSAPGVLSSPPG--YTMH--P 56
QEN GGT YFY ++ P G G AP P YT H P
Sbjct: 259 QENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPAAMMYTGHVYP 318
Query: 57 GTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDNYH 114
G +V P T+ S+F+M + +RAE+ +N ++ ++ A LPLEV+NYH
Sbjct: 319 GPSSNVVTMQPK--TLLESAFFMPDEMRAEVLARNEISNLIMDAAEAAQHALPLEVENYH 376
Query: 115 DL 116
L
Sbjct: 377 AL 378
>gi|21357711|ref|NP_647767.1| CG11486, isoform G [Drosophila melanogaster]
gi|16769024|gb|AAL28731.1| LD14901p [Drosophila melanogaster]
gi|23092861|gb|AAN11527.1| CG11486, isoform G [Drosophila melanogaster]
gi|220942988|gb|ACL84037.1| CG11486-PG [synthetic construct]
Length = 790
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 581 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 639
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 640 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 699
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 700 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 759
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 760 RDEQSVLIVSYAELKNCLENAFSELMSSAA 789
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 636 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSI 695
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 696 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 755
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 756 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 789
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 9 QENFGGTTYFYQAPSSGTEVP--------GAAGPAPGDDLSAPGVLSSPPG--YTMH--P 56
QEN GGT YFY ++ P G G AP P YT H P
Sbjct: 269 QENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPAAMMYTGHVYP 328
Query: 57 GTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDNYH 114
G +V P T+ S+F+M + +RAE+ +N ++ ++ A LPLEV+NYH
Sbjct: 329 GPSSNVVTMQPK--TLLESAFFMPDEMRAEVLARNEISNLIMDAAEAAQHALPLEVENYH 386
Query: 115 DL 116
L
Sbjct: 387 AL 388
>gi|195492808|ref|XP_002094149.1| GE20357 [Drosophila yakuba]
gi|194180250|gb|EDW93861.1| GE20357 [Drosophila yakuba]
Length = 780
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 571 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 629
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 630 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 689
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 690 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 749
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 750 RDEQSVLIVSYAELKNCLENAFSELMSSAA 779
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 626 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSI 685
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 686 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 745
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 746 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 779
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 9 QENFGGTTYFYQAPSSGTEVP--------GAAGPAPGDDLSAPGVLSSPPG--YTMH--P 56
QEN GGT YFY S+ P G G AP P YT H P
Sbjct: 259 QENVGGTIYFYPTASAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPASMMYTGHVYP 318
Query: 57 GTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDNYH 114
G +V P T+ S+F+M + +R E+ +N ++ ++ A LPLEV+NYH
Sbjct: 319 GPSSNVVTLQPK--TLLESAFFMPDEMRTEVLARNEISNLIMDAAEAAQHALPLEVENYH 376
Query: 115 DL 116
L
Sbjct: 377 AL 378
>gi|161080917|ref|NP_001097486.1| CG11486, isoform O [Drosophila melanogaster]
gi|158028417|gb|ABW08446.1| CG11486, isoform O [Drosophila melanogaster]
Length = 749
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 540 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 598
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 599 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 658
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 659 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 718
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 719 RDEQSVLIVSYAELKNCLENAFSELMSSAA 748
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 595 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSI 654
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 655 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 714
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 715 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 748
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 9 QENFGGTTYFYQAPSSGTEVP--------GAAGPAPGDDLSAPGVLSSPPG--YTMH--P 56
QEN GGT YFY ++ P G G AP P YT H P
Sbjct: 228 QENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPAAMMYTGHVYP 287
Query: 57 GTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDNYH 114
G +V P T+ S+F+M + +RAE+ +N ++ ++ A LPLEV+NYH
Sbjct: 288 GPSSNVVTMQPK--TLLESAFFMPDEMRAEVLARNEISNLIMDAAEAAQHALPLEVENYH 345
Query: 115 DL 116
L
Sbjct: 346 AL 347
>gi|195337018|ref|XP_002035130.1| GM14529 [Drosophila sechellia]
gi|194128223|gb|EDW50266.1| GM14529 [Drosophila sechellia]
Length = 799
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 590 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 648
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 649 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 708
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 709 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 768
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 769 RDEQSVLIVSYAELKNCLENAFSELMSSAA 798
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 645 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSI 704
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 705 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 764
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 765 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 798
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 9 QENFGGTTYFYQAPSSGTEVP--------GAAGPAPGDDLSAPGVLSSPPG--YTMH--P 56
QEN GGT YFY ++ P G G AP P YT H P
Sbjct: 278 QENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPAAMMYTGHVYP 337
Query: 57 GTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDNYH 114
G +V P T+ S+F+M + +R E+ +N ++ ++ A LPLEV+NYH
Sbjct: 338 GPSSNVVTMQPK--TLLESAFFMPDEMRTEVLARNEISNLIMDAAEAAQHALPLEVENYH 395
Query: 115 DL 116
L
Sbjct: 396 AL 397
>gi|194865262|ref|XP_001971342.1| GG14903 [Drosophila erecta]
gi|190653125|gb|EDV50368.1| GG14903 [Drosophila erecta]
Length = 782
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 573 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 631
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 632 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 691
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 692 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 751
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 752 RDEQSVLIVSYAELKNCLENAFSELMSSAA 781
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 628 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSI 687
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 688 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 747
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 748 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 781
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 9 QENFGGTTYFYQAPSSGTEVP--------GAAGPAPGDDLSAPGVLSSPPG--YTMH--P 56
QEN GGT YFY ++ P G G AP P YT H P
Sbjct: 261 QENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPAAMMYTGHVYP 320
Query: 57 GTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDNYH 114
G +V P T+ S+F+M + +R E+ +N ++ ++ A LPLEV+NYH
Sbjct: 321 GPSSNVVTMQPK--TLLESAFFMPDEMRTEVLARNEISNLIMDAAEAAQHALPLEVENYH 378
Query: 115 DL 116
L
Sbjct: 379 AL 380
>gi|24656416|ref|NP_728804.1| CG11486, isoform A [Drosophila melanogaster]
gi|24656423|ref|NP_728805.1| CG11486, isoform B [Drosophila melanogaster]
gi|24656428|ref|NP_728806.1| CG11486, isoform D [Drosophila melanogaster]
gi|10727262|gb|AAG22234.1| CG11486, isoform A [Drosophila melanogaster]
gi|10727263|gb|AAG22235.1| CG11486, isoform B [Drosophila melanogaster]
gi|10727264|gb|AAG22236.1| CG11486, isoform D [Drosophila melanogaster]
gi|261278407|gb|ACX61589.1| GH12962p [Drosophila melanogaster]
Length = 742
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 533 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 591
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 592 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 651
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 652 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 711
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 712 RDEQSVLIVSYAELKNCLENAFSELMSSAA 741
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 588 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSI 647
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 648 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 707
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 708 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 741
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 9 QENFGGTTYFYQAPSSGTEVP--------GAAGPAPGDDLSAPGVLSSPPG--YTMH--P 56
QEN GGT YFY ++ P G G AP P YT H P
Sbjct: 221 QENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPAAMMYTGHVYP 280
Query: 57 GTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDNYH 114
G +V P T+ S+F+M + +RAE+ +N ++ ++ A LPLEV+NYH
Sbjct: 281 GPSSNVVTMQPK--TLLESAFFMPDEMRAEVLARNEISNLIMDAAEAAQHALPLEVENYH 338
Query: 115 DL 116
L
Sbjct: 339 AL 340
>gi|284515892|gb|ADB91453.1| LD10418p [Drosophila melanogaster]
Length = 807
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 598 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 656
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 657 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 716
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 717 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 776
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 777 RDEQSVLIVSYAELKNCLENAFSELMSSAA 806
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 653 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSI 712
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 713 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 772
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 773 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 806
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 9 QENFGGTTYFYQAPSSGTEVP--------GAAGPAPGDDLSAPGVLSSPPG--YTMH--P 56
QEN GGT YFY ++ P G G AP P YT H P
Sbjct: 286 QENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPAAMMYTGHVYP 345
Query: 57 GTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDNYH 114
G +V P T+ S+F+M + +RAE+ +N ++ ++ A LPLEV+NYH
Sbjct: 346 GPSSNVVTMQPK--TLLESAFFMPDEMRAEVLARNEISNLIMDAAEAAQHALPLEVENYH 403
Query: 115 DL 116
L
Sbjct: 404 AL 405
>gi|195125159|ref|XP_002007049.1| GI12599 [Drosophila mojavensis]
gi|193918658|gb|EDW17525.1| GI12599 [Drosophila mojavensis]
Length = 811
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 175/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q SID++ R+YS DLRN I+YL
Sbjct: 603 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQASIDMVTRNYSTDLRNFIVYLF 661
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 662 TTNNRRSVTDLMPMIGARFYTQLDALQAQVDMQEDELAKEMENGRLYRILVKLNSINERP 721
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRD+L H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 722 DFNLDCTWSETGDRYMLKLFRDFLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 781
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL S+A+
Sbjct: 782 RDEQSVLIVSYAELKNCLENAFSELMSAAN 811
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 108/154 (70%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 658 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQAQVDMQEDELAKEMENGRLYRILVKLNSI 717
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRD+L H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 718 NERPDFNLDCTWSETGDRYMLKLFRDFLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 777
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL S+A+
Sbjct: 778 QLMSRDEQSVLIVSYAELKNCLENAFSELMSAAN 811
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 9 QENFGGTTYFYQAPSSGTEVP----------GAAGPAPGDDLSAPGVLSSPPGYTMHPGT 58
QEN GGT YFY ++ P A PA +SA LS+ P ++ G
Sbjct: 288 QENVGGTIYFYPTANAQNSQPVVNSVVVDAAHPAHPAHHGVVSAVAPLSAVPSQLLYAG- 346
Query: 59 PPHVRHKPP-NAATVD-----HSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEV 110
HV P N T+ S+F+M + +R++I +N ++ ++ A LPLEV
Sbjct: 347 --HVYPGPASNVITMQPKTQLESAFFMPDEMRSDILGRNEISNLIMDAAEAAQHALPLEV 404
Query: 111 DNYHDL 116
DNYH L
Sbjct: 405 DNYHAL 410
>gi|195011713|ref|XP_001983282.1| GH15817 [Drosophila grimshawi]
gi|193896764|gb|EDV95630.1| GH15817 [Drosophila grimshawi]
Length = 854
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 175/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 645 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 703
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R LVKL +INERP
Sbjct: 704 TTNNRRSVTDLMPMIGARFYTQLDALQAQVDMQEDELAKEMENGRLYRTLVKLNSINERP 763
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRD+L H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 764 DFNLDCTWSETGDRYMLKLFRDFLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 823
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL S+A+
Sbjct: 824 RDEQSVLIVSYAELKNCLENAFSELMSTAA 853
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/154 (70%), Positives = 130/154 (84%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R LVKL +I
Sbjct: 700 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQAQVDMQEDELAKEMENGRLYRTLVKLNSI 759
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRD+L H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 760 NERPDFNLDCTWSETGDRYMLKLFRDFLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 819
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL S+A+
Sbjct: 820 QLMSRDEQSVLIVSYAELKNCLENAFSELMSTAA 853
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 20/126 (15%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGA----------AGPAPGDDLSA----PGVLSSPPGYTM 54
QEN GGT YFY ++ P + PA +SA V+ S Y
Sbjct: 329 QENVGGTIYFYPTANAPNNQPVVNSVVVDSTHPSHPAHHGVVSAVAPLNAVVPSQLLYAG 388
Query: 55 H--PGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEV 110
H PG +V P T S+F+M + +R++I +N ++ ++ A LPLEV
Sbjct: 389 HVYPGPASNVIAMQPK--TQLESAFFMPDEMRSDILARNEISNLIMDAAEAAQHALPLEV 446
Query: 111 DNYHDL 116
DNYH L
Sbjct: 447 DNYHAL 452
>gi|195442493|ref|XP_002068989.1| GK12323 [Drosophila willistoni]
gi|194165074|gb|EDW79975.1| GK12323 [Drosophila willistoni]
Length = 836
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 174/208 (83%), Gaps = 1/208 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 629 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 687
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 688 TTNNRRSVTDLMPMIGARFYTQLDALQSQIDMQEDELAKEMENGRLYRILVKLNSINERP 747
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 748 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSLERVQLMS 807
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSS 314
RDEQSVL+VSYAELK CL+ +F EL SS
Sbjct: 808 RDEQSVLIVSYAELKNCLENAFSELMSS 835
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/152 (71%), Positives = 129/152 (84%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 684 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSQIDMQEDELAKEMENGRLYRILVKLNSI 743
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 744 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSLERV 803
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSS 476
LMSRDEQSVL+VSYAELK CL+ +F EL SS
Sbjct: 804 QLMSRDEQSVLIVSYAELKNCLENAFSELMSS 835
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 9 QENFGGTTYFYQAPSSGTEVP--------GAAGPAPGDDLSAPGVLSSPPG------YTM 54
QEN GGT YFY ++ P A PA +SA LSS G YT
Sbjct: 314 QENVGGTIYFYPTANAQNSQPVGVNNVVVDATHPA-HHGVSAVAPLSSVSGVPSGLLYTG 372
Query: 55 H--PGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEV 110
H PG +V P T S+F++ + +R+EI +N ++ ++ A LPL+V
Sbjct: 373 HVYPGPASNVIAMQPK--TQLESAFFIPDEMRSEILARNEISNLIMDAAEAAQHALPLDV 430
Query: 111 DNYHDL 116
DNYH L
Sbjct: 431 DNYHAL 436
>gi|194749222|ref|XP_001957038.1| GF24267 [Drosophila ananassae]
gi|190624320|gb|EDV39844.1| GF24267 [Drosophila ananassae]
Length = 826
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 175/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 618 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 676
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 677 TTNNRRSVTDLMPMIGARFYTQLDALQSQIDMQEDELAKEMENGRLYRILVKLNSINERP 736
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 737 NFNLDFTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 796
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSY+ELK CL+++F EL S+ +
Sbjct: 797 RDEQSVLIVSYSELKNCLEKAFSELMSTTN 826
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 107/154 (69%), Positives = 130/154 (84%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 673 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSQIDMQEDELAKEMENGRLYRILVKLNSI 732
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 733 NERPNFNLDFTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 792
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSY+ELK CL+++F EL S+ +
Sbjct: 793 QLMSRDEQSVLIVSYSELKNCLEKAFSELMSTTN 826
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 24/127 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVP---------------GAAGPAPGDDLSAPGVLSSPPGYT 53
QEN GGT YFY ++ P G + AP ++A G + YT
Sbjct: 304 QENVGGTIYFYPTANAQNNQPVVNSVVVDTTHPAHHGVSAVAP---MNAVGGVPPTMFYT 360
Query: 54 MH--PGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLE 109
H PG +V P T S+F++ + +R+EI +N ++ ++ A LP+E
Sbjct: 361 GHVYPGPASNVMTMHPK--TQLESAFFIPDEMRSEILARNEISNLIMDAAEAAQHALPME 418
Query: 110 VDNYHDL 116
VDNYH L
Sbjct: 419 VDNYHAL 425
>gi|198463205|ref|XP_001352732.2| GA11027 [Drosophila pseudoobscura pseudoobscura]
gi|198151158|gb|EAL30232.2| GA11027 [Drosophila pseudoobscura pseudoobscura]
Length = 796
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 175/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 587 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 645
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 646 TTNNRRSVTDLMPMIGARFYTQLDALQSQIDMQEDELAKEMENGRLYRILVKLNSINERP 705
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPW+D +HIV LNKLDAG+ E++ LMS
Sbjct: 706 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWMDHAHIVQSLNKLDAGSIERVQLMS 765
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 766 RDEQSVLIVSYAELKNCLENAFSELMSSAA 795
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 108/154 (70%), Positives = 130/154 (84%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 642 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSQIDMQEDELAKEMENGRLYRILVKLNSI 701
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPW+D +HIV LNKLDAG+ E++
Sbjct: 702 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWMDHAHIVQSLNKLDAGSIERV 761
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 762 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 795
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 56/124 (45%), Gaps = 18/124 (14%)
Query: 9 QENFGGTTYFY-------QAPSSGTEVPGAAGPAPGDDLSAP-----GVLSSPPGYTMH- 55
QEN GGT YFY P + V A PA S P G + S YT H
Sbjct: 273 QENVGGTIYFYPTANAQGNQPVVNSVVVDATHPAHHGVSSVPTMSSVGGVPSSLMYTGHV 332
Query: 56 -PGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDN 112
PG +V P T S+F++ + +RA+I +N ++ ++ A LP EVDN
Sbjct: 333 YPGPASNVITMQPK--THLESAFFIPDEMRADILARNEISNLIMDAAEAAQHALPHEVDN 390
Query: 113 YHDL 116
YH L
Sbjct: 391 YHAL 394
>gi|195093793|ref|XP_001997756.1| GH23665 [Drosophila grimshawi]
gi|193891584|gb|EDV90450.1| GH23665 [Drosophila grimshawi]
Length = 523
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 175/210 (83%), Gaps = 1/210 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 314 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 372
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R LVKL +INERP
Sbjct: 373 TTNNRRSVTDLMPMIGARFYTQLDALQAQVDMQEDELAKEMENGRLYRTLVKLNSINERP 432
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRD+L H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 433 DFNLDCTWSETGDRYMLKLFRDFLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 492
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL S+A+
Sbjct: 493 RDEQSVLIVSYAELKNCLENAFSELMSTAA 522
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 108/154 (70%), Positives = 130/154 (84%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R LVKL +I
Sbjct: 369 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQAQVDMQEDELAKEMENGRLYRTLVKLNSI 428
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRD+L H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 429 NERPDFNLDCTWSETGDRYMLKLFRDFLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 488
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL S+A+
Sbjct: 489 QLMSRDEQSVLIVSYAELKNCLENAFSELMSTAA 522
>gi|118786843|ref|XP_315693.3| AGAP005680-PA [Anopheles gambiae str. PEST]
gi|116126516|gb|EAA11807.3| AGAP005680-PA [Anopheles gambiae str. PEST]
Length = 737
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 178/209 (85%), Gaps = 1/209 (0%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL V ++H Q+DL ALGKLILA+ CRSL +VQR+ +Q+S++L++R YS+DLRN+++ LL
Sbjct: 526 PLTVLDHHQ-QEDLLALGKLILALACRSLQSVQRDQIQSSVELVSRHYSSDLRNILICLL 584
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V ++MPMIGAR+Y QLDA+Q D E+EL+KEMENGRL+RLLVKLG INERP
Sbjct: 585 NTNTRRSVTEIMPMIGARFYVQLDALQAQCDIQEDELAKEMENGRLYRLLVKLGCINERP 644
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
ELNLD TWSETGDRYMLKLFRDYL H V EDGRPWL+ SHIV CLNKLDAGT EK+ LMS
Sbjct: 645 ELNLDVTWSETGDRYMLKLFRDYLFHTVTEDGRPWLNQSHIVQCLNKLDAGTMEKVQLMS 704
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSA 315
RDEQSVLVV+YAELK CLDQ+F EL +++
Sbjct: 705 RDEQSVLVVTYAELKHCLDQAFSELVAAS 733
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/151 (74%), Positives = 130/151 (86%)
Query: 327 LLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINE 386
LL+ + +R+V ++MPMIGAR+Y QLDA+Q D E+EL+KEMENGRL+RLLVKLG INE
Sbjct: 583 LLNTNTRRSVTEIMPMIGARFYVQLDALQAQCDIQEDELAKEMENGRLYRLLVKLGCINE 642
Query: 387 RPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICL 446
RPELNLD TWSETGDRYMLKLFRDYL H V EDGRPWL+ SHIV CLNKLDAGT EK+ L
Sbjct: 643 RPELNLDVTWSETGDRYMLKLFRDYLFHTVTEDGRPWLNQSHIVQCLNKLDAGTMEKVQL 702
Query: 447 MSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
MSRDEQSVLVV+YAELK CLDQ+F EL +++
Sbjct: 703 MSRDEQSVLVVTYAELKHCLDQAFSELVAAS 733
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 22/130 (16%)
Query: 3 YIILCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTM-------- 54
Y QEN GGTTYFY P++ ++ D S + SS T+
Sbjct: 213 YTATIFQENVGGTTYFY--PTAANHQLSSSSTVNTTDNSFVHIASSQINITLICTHSPLL 270
Query: 55 --------HPGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPEL 106
+PG HV + A ++F+M + +R +I +N L+++ ++
Sbjct: 271 SFLAAGHVYPGPASHVINMQSKAQV--SAAFFMQDELRNDILARNE--LINSIESDGQDI 326
Query: 107 PLEVDNYHDL 116
PLEV+NYH L
Sbjct: 327 PLEVENYHSL 336
>gi|405968090|gb|EKC33192.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Crassostrea
gigas]
Length = 900
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 169/203 (83%), Gaps = 1/203 (0%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-R 172
H Q+DL LGK++LA+ C ++MA++R+N Q S++L+AR+YSADL+N LYLL+ + R
Sbjct: 691 HYQQEDLVYLGKVVLALACNTVMAIKRDNFQNSMELIARNYSADLKNFFLYLLTNQTRPR 750
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
++ D+MPMIGAR+YTQLD+ QL D +ENEL+KE+ENGRLFRLL KLGTINERPE NLD
Sbjct: 751 SINDIMPMIGARFYTQLDSAQLRSDVIENELTKEVENGRLFRLLAKLGTINERPEYNLDM 810
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
WSETGDRYMLKLFRDYL HQV + G PW+DM+HIV CLNKLD+G+ E+ICL SRDEQSV
Sbjct: 811 QWSETGDRYMLKLFRDYLFHQVDQTGAPWIDMAHIVQCLNKLDSGSPERICLTSRDEQSV 870
Query: 293 LVVSYAELKQCLDQSFHELSSSA 315
LVVSYAELKQ +++F EL SS+
Sbjct: 871 LVVSYAELKQNYERAFSELLSSS 893
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 130/154 (84%), Gaps = 1/154 (0%)
Query: 325 LYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
LYLL+ + R++ D+MPMIGAR+YTQLD+ QL D +ENEL+KE+ENGRLFRLL KLGT
Sbjct: 740 LYLLTNQTRPRSINDIMPMIGARFYTQLDSAQLRSDVIENELTKEVENGRLFRLLAKLGT 799
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
INERPE NLD WSETGDRYMLKLFRDYL HQV + G PW+DM+HIV CLNKLD+G+ E+
Sbjct: 800 INERPEYNLDMQWSETGDRYMLKLFRDYLFHQVDQTGAPWIDMAHIVQCLNKLDSGSPER 859
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
ICL SRDEQSVLVVSYAELKQ +++F EL SS+
Sbjct: 860 ICLTSRDEQSVLVVSYAELKQNYERAFSELLSSS 893
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 19/108 (17%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
QEN GGTTYFY DD + + P ++M P PPH+ H
Sbjct: 293 QENVGGTTYFYSP----------------DDFNPQHEATQLPNFSMFPSLPPHIAHL--- 333
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
+ F+M + ++ +I +++ALT+ + ++P EVDNYH+L
Sbjct: 334 TVKKNMPQFFMPDELKMDILNRHALTMAQLDTTQTTDIPAEVDNYHNL 381
>gi|443693727|gb|ELT95021.1| hypothetical protein CAPTEDRAFT_144629, partial [Capitella teleta]
Length = 511
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 134/206 (65%), Positives = 170/206 (82%), Gaps = 3/206 (1%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-R 172
H Q+DL +LGK ILA+ C S++ +Q+E++QTS+D++AR+YS DL+NL+ YLL+ H + R
Sbjct: 296 HYQQEDLVSLGKTILALACNSIIGIQKEHMQTSLDVVARNYSPDLKNLLFYLLTNHSRNR 355
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
+V D+MPMIGAR+Y+QLDA QL D +E EL+KE+ENGRL+R++ KLGTINERPE NLD
Sbjct: 356 SVNDIMPMIGARFYSQLDAAQLKNDVMEAELNKEVENGRLYRMMCKLGTINERPEYNLDE 415
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
TWSETGDRYMLKLFRDY+ HQV + G P++DM H+ CLNKLDAG EKICLMSRDEQSV
Sbjct: 416 TWSETGDRYMLKLFRDYIFHQVDDRGSPYIDMGHVTQCLNKLDAGVPEKICLMSRDEQSV 475
Query: 293 LVVSYAELKQCLDQSFHEL--SSSAS 316
++VSYAELK C++ SF EL SS AS
Sbjct: 476 ILVSYAELKHCVESSFSELLQSSPAS 501
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/160 (68%), Positives = 130/160 (81%), Gaps = 3/160 (1%)
Query: 322 TLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L YLL+ H + R+V D+MPMIGAR+Y+QLDA QL D +E EL+KE+ENGRL+R++ K
Sbjct: 342 NLLFYLLTNHSRNRSVNDIMPMIGARFYSQLDAAQLKNDVMEAELNKEVENGRLYRMMCK 401
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
LGTINERPE NLD TWSETGDRYMLKLFRDY+ HQV + G P++DM H+ CLNKLDAG
Sbjct: 402 LGTINERPEYNLDETWSETGDRYMLKLFRDYIFHQVDDRGSPYIDMGHVTQCLNKLDAGV 461
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL--SSSAS 478
EKICLMSRDEQSV++VSYAELK C++ SF EL SS AS
Sbjct: 462 PEKICLMSRDEQSVILVSYAELKHCVESSFSELLQSSPAS 501
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 21/109 (19%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+EN GGTTYFY +D ++ G + P +T++PG PH+ H P
Sbjct: 1 KENVGGTTYFYSQ----------------EDFNSHGGMVFP-NFTVYPGMLPHIAHMKPK 43
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPE-LFPELPLEVDNYHDL 116
+ + SF+M + ++ E+ ++ +L+L+ + E L P+LP EVD++H+L
Sbjct: 44 S---NQPSFFMPDEMKMELLNRQSLSLLQMDAEHLPPDLPREVDDFHNL 89
>gi|317419919|emb|CBN81955.1| PAB-dependent poly(A)-specific ribonuclease subunit 3
[Dicentrarchus labrax]
Length = 703
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 167/201 (83%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L++ +YS+DL+NLILYLL+ + R+V
Sbjct: 500 QADLVSLGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTEQSRLRSVN 559
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 560 DIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 619
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 620 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVV 679
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C D +F EL ++AS
Sbjct: 680 TYSDLKRCFDSTFQELQAAAS 700
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 106/157 (67%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 544 LILYLLTEQSRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKL 603
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG
Sbjct: 604 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVP 663
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C D +F EL ++AS
Sbjct: 664 EKISLVSRDEKSVLVVTYSDLKRCFDSTFQELQAAAS 700
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 20/111 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D+ AP P Y ++P T PHV +
Sbjct: 209 IIQKETVGGTTYFYT-----------------DNTPAPIAGMVFPTYHIYPPTVPHVAYM 251
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
P A + SF+M++ +R E+ +++ +T+ + P++P EVD+YH L
Sbjct: 252 QPKA---NAPSFFMADELRQELINRHLITMAQIDHSENPDVPSEVDSYHSL 299
>gi|348512132|ref|XP_003443597.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Oreochromis niloticus]
Length = 793
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 167/201 (83%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L++ +YS+DL+NLILYLL+ + R+V
Sbjct: 590 QADLVSLGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTEQSRLRSVN 649
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 650 DIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 709
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 710 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVV 769
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C D +F EL ++AS
Sbjct: 770 TYSDLKRCFDSTFQELQAAAS 790
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 106/157 (67%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 634 LILYLLTEQSRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKL 693
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG
Sbjct: 694 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVP 753
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C D +F EL ++AS
Sbjct: 754 EKISLVSRDEKSVLVVTYSDLKRCFDSTFQELQAAAS 790
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D+ AP P Y ++P T PHV +
Sbjct: 299 IIQKETVGGTTYFYT-----------------DNTPAPMAGMVFPTYHIYPPTAPHVAYM 341
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P++P EVD+YH
Sbjct: 342 QPKA---NAPSFFMADELRQELINRHLITMAQIDHSENPDVPSEVDSYH 387
>gi|432930090|ref|XP_004081315.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Oryzias latipes]
Length = 788
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 167/201 (83%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L++ +YS+DL+NLILYLLS + R+V
Sbjct: 585 QADLVSLGKVVLALACNSLAGIQRENLQKAMELVSLNYSSDLKNLILYLLSEQSRLRSVN 644
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 645 DIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 704
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG EKI L+SRDE+S+LVV
Sbjct: 705 ETGDRYLLKLFRDHLFHQVTETGSPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSILVV 764
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C D +F EL ++A+
Sbjct: 765 TYSDLKRCFDSTFQELQAAAA 785
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/157 (66%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLLS + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 629 LILYLLSEQSRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKL 688
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG
Sbjct: 689 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTETGSPWIDLSHIVSCLNKLDAGVP 748
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+S+LVV+Y++LK+C D +F EL ++A+
Sbjct: 749 EKISLVSRDEKSILVVTYSDLKRCFDSTFQELQAAAA 785
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D+ AP P Y ++P PP+V +
Sbjct: 294 IIQKETVGGTTYFYT-----------------DNTPAPMTGMVFPTYHIYPSNPPNVAYM 336
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+V + P++P EVD+YH
Sbjct: 337 QPKA---NAPSFFMADELRQELINRHLITMVHIDHSENPDVPSEVDSYH 382
>gi|410909065|ref|XP_003968011.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Takifugu rubripes]
Length = 793
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 165/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L++ +YS+DL+NLILYLL+ + R+V
Sbjct: 590 QADLVSLGKVVLALACNSLAGIQRENLQKAMELVSLNYSSDLKNLILYLLTDQSRLRSVN 649
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DP WS
Sbjct: 650 DIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPAWS 709
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 710 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVV 769
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C D +F EL S AS
Sbjct: 770 TYSDLKRCFDNTFQELQSVAS 790
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/157 (67%), Positives = 128/157 (81%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 634 LILYLLTDQSRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKL 693
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DP WSETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG
Sbjct: 694 GTINERPEFQKDPAWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVP 753
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C D +F EL S AS
Sbjct: 754 EKISLVSRDEKSVLVVTYSDLKRCFDNTFQELQSVAS 790
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D+ AP P Y ++P T PHV + P
Sbjct: 302 KETVGGTTYFYT-----------------DNTPAPMAGMVFPTYHIYPSTAPHVAYMQPK 344
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + ++P EVD+YH
Sbjct: 345 A---NAPSFFMADELRQELINRHLITMAQIDHSENTDVPSEVDSYH 387
>gi|320118902|ref|NP_001099162.2| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Danio rerio]
Length = 799
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 167/201 (83%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L++ +YS+DL+NLILYLLS + R+V
Sbjct: 596 QADLISLGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLSEQSRLRSVN 655
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 656 DIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 715
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 716 ETGDRYLLKLFRDHLFHQVTETGTPWVDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVV 775
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 776 TYSDLKRCFESTFQELLATAN 796
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 105/157 (66%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLLS + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 640 LILYLLSEQSRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKL 699
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG
Sbjct: 700 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTETGTPWVDLSHIVSCLNKLDAGVP 759
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 760 EKISLVSRDEKSVLVVTYSDLKRCFESTFQELLATAN 796
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D+ AP P Y M+P T PHV +
Sbjct: 305 IIQKETVGGTTYFYT-----------------DNTPAPLAGMVFPTYHMYPQTAPHVAYM 347
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 348 QPKA---NAPSFFMADELRQELINRHLITMAQIDQSENPGVPSEVDSYH 393
>gi|351697538|gb|EHB00457.1| PAB-dependent poly(A)-specific ribonuclease subunit 3
[Heterocephalus glaber]
Length = 741
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 538 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 597
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +LSKE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 598 DIMPMIGARFYTQLDAAQMRNDVIEEDLSKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 657
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 658 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 717
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 718 TYSDLKRCFENTFQELMAAAN 738
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/157 (66%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +LSKE++NGRLFRLL KL
Sbjct: 582 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLSKEVQNGRLFRLLAKL 641
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 642 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 701
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 702 EKISLISRDEKSVLVVTYSDLKRCFENTFQELMAAAN 738
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 249 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 291
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 292 A---NAPSFFMADELRQELINRHLITMAQIDQSDMPAVPTEVDSYH 334
>gi|417412337|gb|JAA52558.1| Putative polya ribonuclease subunit, partial [Desmodus rotundus]
Length = 697
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 494 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 553
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 554 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 613
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 614 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 673
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 674 TYSDLKRCFENTFQELIAAAN 694
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 538 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 597
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 598 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 657
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 658 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 694
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 202 VIQKETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYM 244
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 245 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPAEVDSYH 290
>gi|397495053|ref|XP_003818377.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 2 [Pan paniscus]
Length = 687
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 484 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 543
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 544 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 603
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 604 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 663
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 664 TYSDLKRCFENTFQELIAAAN 684
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 528 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 587
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 588 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 647
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 648 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 684
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 192 VIQKETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYM 234
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 235 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 280
>gi|118764299|gb|AAI28181.1| PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
[Homo sapiens]
Length = 687
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 484 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 543
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 544 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 603
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 604 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 663
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 664 TYSDLKRCFENTFQELIAAAN 684
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 528 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 587
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 588 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 647
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 648 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 684
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 192 VIQKETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYM 234
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 235 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 280
>gi|426375036|ref|XP_004054357.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 1 [Gorilla gorilla gorilla]
Length = 687
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 484 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 543
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 544 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 603
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 604 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 663
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 664 TYSDLKRCFENTFQELIAAAN 684
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 528 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 587
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 588 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 647
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 648 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 684
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 192 VIQKETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYM 234
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 235 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 280
>gi|117606462|gb|ABK41888.1| polyA specific ribonuclease subunit homolog [Homo sapiens]
Length = 687
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 484 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 543
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 544 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 603
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 604 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 663
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 664 TYSDLKRCFENTFQELIAAAN 684
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 528 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 587
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 588 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 647
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 648 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 684
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 192 VIQKETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYM 234
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 235 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 280
>gi|403253993|ref|XP_003919768.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 2 [Saimiri boliviensis boliviensis]
Length = 687
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 484 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 543
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 544 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 603
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 604 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 663
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 664 TYSDLKRCFENTFQELIAAAN 684
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 528 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 587
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 588 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 647
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 648 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 684
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 192 VIQKETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYM 234
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 235 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 280
>gi|395850153|ref|XP_003797662.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 2 [Otolemur garnettii]
Length = 687
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 484 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 543
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 544 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 603
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 604 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 663
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 664 TYSDLKRCFENTFQELIAAAN 684
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 528 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 587
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 588 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 647
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 648 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 684
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 192 VIQKETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYM 234
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 235 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPAEVDSYH 280
>gi|417412828|gb|JAA52778.1| Putative polya ribonuclease subunit, partial [Desmodus rotundus]
Length = 829
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 626 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 685
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 686 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 745
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 746 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 805
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 806 TYSDLKRCFENTFQELIAAAN 826
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 670 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 729
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 730 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 789
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 790 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 826
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 337 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 379
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 380 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPAEVDSYH 422
>gi|354468527|ref|XP_003496704.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 1 [Cricetulus griseus]
Length = 691
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 484 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 543
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 544 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 603
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 604 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 663
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 664 TYSDLKRCFENTFQELIAAAN 684
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 528 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 587
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 588 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 647
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 648 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 684
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 192 VIQKETVGGTTYFYT-----------------DTTPAPVTGMVFPNYHIYPPTAPHVAYM 234
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 235 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 280
>gi|426236487|ref|XP_004012199.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 2 [Ovis aries]
Length = 687
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 484 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 543
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 544 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 603
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 604 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 663
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 664 TYSDLKRCFENTFQELIAAAN 684
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 528 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 587
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 588 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 647
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 648 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 684
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY + PAP + P Y ++P T PHV +
Sbjct: 192 VIQKETVGGTTYFYTDTT----------PAPLSGMVFPN-------YHIYPPTAPHVAYM 234
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 235 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 280
>gi|410947159|ref|XP_003980320.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3,
partial [Felis catus]
Length = 749
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 546 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 605
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 606 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 665
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 666 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 725
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 726 TYSDLKRCFENTFQELIAAAN 746
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 590 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 649
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 650 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 709
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 710 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 746
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 257 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 299
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 300 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 342
>gi|293352381|ref|XP_346915.4| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like isoform 2 [Rattus norvegicus]
Length = 833
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 128/207 (61%), Positives = 168/207 (81%), Gaps = 1/207 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 626 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 685
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 686 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 745
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L SRDE+SVLVV
Sbjct: 746 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLTSRDEKSVLVV 805
Query: 296 SYAELKQCLDQSFHELSSSASLTPKST 322
+Y++LK+C + +F EL ++A+ +S+
Sbjct: 806 TYSDLKRCFENTFQELIAAANGNDRSS 832
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/163 (63%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 670 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 729
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 730 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 789
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKST 484
EKI L SRDE+SVLVV+Y++LK+C + +F EL ++A+ +S+
Sbjct: 790 EKISLTSRDEKSVLVVTYSDLKRCFENTFQELIAAANGNDRSS 832
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 337 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 379
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 380 A---NAPSFFMADELRQELINRHLITMAQIDQADLPAVPTEVDSYH 422
>gi|348583391|ref|XP_003477456.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Cavia porcellus]
Length = 751
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 548 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 607
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 608 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 667
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 668 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 727
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 728 TYSDLKRCFENTFQELIAAAN 748
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 592 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 651
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 652 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 711
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 712 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 748
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D P P Y ++P T PHV +
Sbjct: 256 VIQKETVGGTTYFYT-----------------DTAPTPLTGMVFPNYHIYPPTAPHVAYM 298
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 299 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 344
>gi|270265830|ref|NP_082567.3| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Mus
musculus]
gi|341942214|sp|Q640Q5.3|PAN3_MOUSE RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit 3
Length = 837
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 630 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 689
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 690 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 749
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 750 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 809
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 810 TYSDLKRCFENTFQELIAAAN 830
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 674 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 733
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 734 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 793
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 794 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 830
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 341 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 383
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 384 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 426
>gi|338715169|ref|XP_001492308.3| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3,
partial [Equus caballus]
Length = 749
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 546 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 605
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 606 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 665
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 666 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 725
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 726 TYSDLKRCFENTFQELIAAAN 746
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 590 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 649
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 650 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 709
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 710 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 746
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 257 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 299
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 300 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 342
>gi|417412915|gb|JAA52815.1| Putative polya ribonuclease subunit, partial [Desmodus rotundus]
Length = 848
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 645 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 704
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 705 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 764
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 765 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 824
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 825 TYSDLKRCFENTFQELIAAAN 845
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 689 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 748
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 749 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 808
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 809 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 845
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 9 QENFGGTTYFYQ--APSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKP 66
+E GGTTYFY P+ T + + ++ P Y ++P T PHV +
Sbjct: 337 KETVGGTTYFYTDTTPAPLTGMRSFKNYHRTACRTEGQIIEVFPNYHIYPPTAPHVAYMQ 396
Query: 67 PNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 397 PKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPAEVDSYH 441
>gi|426375038|ref|XP_004054358.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 2 [Gorilla gorilla gorilla]
Length = 741
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 538 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 597
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 598 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 657
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 658 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 717
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 718 TYSDLKRCFENTFQELIAAAN 738
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 582 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 641
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 642 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 701
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 702 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 738
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 249 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 291
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 292 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 334
>gi|380798763|gb|AFE71257.1| PAB-dependent poly(A)-specific ribonuclease subunit 3, partial
[Macaca mulatta]
Length = 854
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 651 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 710
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 711 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 770
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 771 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 830
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 831 TYSDLKRCFENTFQELIAAAN 851
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 695 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 754
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 755 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 814
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 815 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 851
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 362 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 404
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 405 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 447
>gi|397495051|ref|XP_003818376.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 1 [Pan paniscus]
Length = 741
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 538 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 597
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 598 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 657
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 658 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 717
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 718 TYSDLKRCFENTFQELIAAAN 738
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 582 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 641
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 642 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 701
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 702 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 738
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 249 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 291
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 292 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 334
>gi|395850151|ref|XP_003797661.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 1 [Otolemur garnettii]
Length = 741
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 538 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 597
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 598 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 657
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 658 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 717
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 718 TYSDLKRCFENTFQELIAAAN 738
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 582 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 641
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 642 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 701
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 702 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 738
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 246 VIQKETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYM 288
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 289 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPAEVDSYH 334
>gi|281346981|gb|EFB22565.1| hypothetical protein PANDA_016111 [Ailuropoda melanoleuca]
Length = 741
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 538 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 597
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 598 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 657
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 658 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 717
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 718 TYSDLKRCFENTFQELIAAAN 738
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 582 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 641
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 642 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 701
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 702 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 738
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 246 VIQKETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYM 288
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 289 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 334
>gi|355700898|gb|EHH28919.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Macaca
mulatta]
gi|355754597|gb|EHH58498.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Macaca
fascicularis]
Length = 741
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 538 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 597
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 598 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 657
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 658 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 717
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 718 TYSDLKRCFENTFQELIAAAN 738
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 582 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 641
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 642 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 701
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 702 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 738
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 249 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 291
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 292 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 334
>gi|417413016|gb|JAA52859.1| Putative polya ribonuclease subunit, partial [Desmodus rotundus]
Length = 883
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 680 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 739
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 740 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 799
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 800 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 859
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 860 TYSDLKRCFENTFQELIAAAN 880
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 724 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 783
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 784 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 843
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 844 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 880
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 391 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 433
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 434 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPAEVDSYH 476
>gi|359070909|ref|XP_003586751.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
[Bos taurus]
Length = 741
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 538 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 597
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 598 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 657
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 658 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 717
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 718 TYSDLKRCFENTFQELIAAAN 738
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 582 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 641
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 642 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 701
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 702 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 738
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY + PAP + P Y ++P T PHV + P
Sbjct: 249 KETVGGTTYFYTDTT----------PAPLSGMVFPN-------YHIYPPTAPHVAYMQPK 291
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 292 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 334
>gi|403253991|ref|XP_003919767.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 1 [Saimiri boliviensis boliviensis]
Length = 741
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 538 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 597
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 598 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 657
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 658 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 717
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 718 TYSDLKRCFENTFQELIAAAN 738
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 582 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 641
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 642 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 701
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 702 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 738
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 249 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 291
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 292 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 334
>gi|281427224|ref|NP_787050.6| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Homo
sapiens]
gi|341942213|sp|Q58A45.3|PAN3_HUMAN RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
3; Short=hPan3
Length = 887
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 864 TYSDLKRCFENTFQELIAAAN 884
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 728 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 787
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 788 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 847
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 848 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 884
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 395 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 437
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 438 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 480
>gi|363729510|ref|XP_417120.3| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
[Gallus gallus]
Length = 811
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 608 QTDLISLGKVVLALACNSLSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVN 667
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 668 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 727
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 728 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 787
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 788 TYSDLKRCFENTFQELIAAAN 808
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 652 LILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 711
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 712 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVP 771
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 772 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 808
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++ PHV + P
Sbjct: 320 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYHPAAPHVAYMQPK 362
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 363 A---NAPSFFMADELRQELINRHLITMAQVDQADIPAVPAEVDSYH 405
>gi|426236485|ref|XP_004012198.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 1 [Ovis aries]
gi|440900665|gb|ELR51746.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Bos
grunniens mutus]
Length = 741
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 538 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 597
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 598 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 657
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 658 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 717
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 718 TYSDLKRCFENTFQELIAAAN 738
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 582 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 641
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 642 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 701
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 702 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 738
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY + PAP + P Y ++P T PHV +
Sbjct: 246 VIQKETVGGTTYFYTDTT----------PAPLSGMVFPN-------YHIYPPTAPHVAYM 288
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 289 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 334
>gi|109496527|ref|XP_001068449.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like isoform 1 [Rattus norvegicus]
Length = 833
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 128/207 (61%), Positives = 168/207 (81%), Gaps = 1/207 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 626 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 685
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 686 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 745
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L SRDE+SVLVV
Sbjct: 746 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLTSRDEKSVLVV 805
Query: 296 SYAELKQCLDQSFHELSSSASLTPKST 322
+Y++LK+C + +F EL ++A+ +S+
Sbjct: 806 TYSDLKRCFENTFQELIAAANGNDRSS 832
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/163 (63%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 670 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 729
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 730 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 789
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKST 484
EKI L SRDE+SVLVV+Y++LK+C + +F EL ++A+ +S+
Sbjct: 790 EKISLTSRDEKSVLVVTYSDLKRCFENTFQELIAAANGNDRSS 832
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 337 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 379
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 380 A---NAPSFFMADELRQELINRHLITMAQIDQADLPAVPTEVDSYH 422
>gi|402901663|ref|XP_003913764.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
[Papio anubis]
Length = 887
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 864 TYSDLKRCFENTFQELIAAAN 884
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 728 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 787
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 788 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 847
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 848 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 884
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 395 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 437
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 438 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 480
>gi|332841100|ref|XP_001136622.2| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 1 [Pan troglodytes]
gi|410219494|gb|JAA06966.1| PAN3 poly(A) specific ribonuclease subunit homolog [Pan
troglodytes]
gi|410255876|gb|JAA15905.1| PAN3 poly(A) specific ribonuclease subunit homolog [Pan
troglodytes]
gi|410300058|gb|JAA28629.1| PAN3 poly(A) specific ribonuclease subunit homolog [Pan
troglodytes]
gi|410342565|gb|JAA40229.1| PAN3 poly(A) specific ribonuclease subunit homolog [Pan
troglodytes]
Length = 887
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 864 TYSDLKRCFENTFQELIAAAN 884
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 728 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 787
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 788 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 847
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 848 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 884
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 395 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 437
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 438 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 480
>gi|297274180|ref|XP_001097210.2| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like isoform 1 [Macaca mulatta]
Length = 887
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 864 TYSDLKRCFENTFQELIAAAN 884
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 728 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 787
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 788 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 847
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 848 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 884
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 395 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 437
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 438 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 480
>gi|296203622|ref|XP_002748962.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
[Callithrix jacchus]
Length = 887
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 864 TYSDLKRCFENTFQELIAAAN 884
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 728 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 787
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 788 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 847
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 848 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 884
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 395 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 437
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 438 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 480
>gi|449269681|gb|EMC80432.1| PAB-dependent poly(A)-specific ribonuclease subunit 3, partial
[Columba livia]
Length = 728
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 525 QADLISLGKVVLALACNSLSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVN 584
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 585 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 644
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 645 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 704
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 705 TYSDLKRCFENTFQELIAAAN 725
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 569 LILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 628
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 629 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVP 688
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 689 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 725
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 20/99 (20%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++ PHV + P
Sbjct: 247 KETVGGTTYFYT-----------------DTTPAPVTGMVFPNYHIYHPAAPHVAYMQPK 289
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELP 107
A + SF+M++ +R E+ +++ +T+ + P +P
Sbjct: 290 A---NAPSFFMADELRQELINRHLITMAQIDQADIPAVP 325
>gi|354468529|ref|XP_003496705.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
isoform 2 [Cricetulus griseus]
Length = 741
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 538 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 597
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 598 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 657
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 658 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 717
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 718 TYSDLKRCFENTFQELIAAAN 738
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 582 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 641
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 642 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 701
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 702 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 738
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 249 KETVGGTTYFYT-----------------DTTPAPVTGMVFPNYHIYPPTAPHVAYMQPK 291
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 292 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 334
>gi|327268990|ref|XP_003219278.1| PREDICTED: LOW QUALITY PROTEIN: PAB-dependent poly(A)-specific
ribonuclease subunit 3-like [Anolis carolinensis]
Length = 883
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 680 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVN 739
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 740 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 799
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 800 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 859
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 860 TYSDLKRCFENTFQELVAAAN 880
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 724 LILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 783
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 784 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVP 843
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 844 EKISLISRDEKSVLVVTYSDLKRCFENTFQELVAAAN 880
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 392 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 434
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 435 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 477
>gi|332242184|ref|XP_003270264.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
[Nomascus leucogenys]
Length = 887
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 864 TYSDLKRCFENTFQELIAAAN 884
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 728 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 787
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 788 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 847
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 848 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 884
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 395 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 437
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 438 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 480
>gi|311266077|ref|XP_003130958.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Sus scrofa]
Length = 887
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 864 TYSDLKRCFENTFQELIAAAN 884
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 728 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 787
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 788 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 847
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 848 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 884
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 395 KETVGGTTYFYT-----------------DSTPAPVSSVVFPNYHIYPPTAPHVAYMQPK 437
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 438 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 480
>gi|345790271|ref|XP_543150.3| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
[Canis lupus familiaris]
Length = 887
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 864 TYSDLKRCFENTFQELIAAAN 884
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 728 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 787
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 788 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 847
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 848 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 884
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 395 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 437
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 438 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 480
>gi|345319002|ref|XP_001519591.2| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
[Ornithorhynchus anatinus]
Length = 909
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 706 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVN 765
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 766 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 825
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 826 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 885
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 886 TYSDLKRCFENTFQELIAAAN 906
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 750 LILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 809
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 810 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVP 869
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 870 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 906
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 418 KETVGGTTYFYT-----------------DTTPAPVTGMVFPNYHIYPPTAPHVAYMQPK 460
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 461 A---NAPSFFMADELRQELINRHLITMAQIDQADIPAVPAEVDSYH 503
>gi|449483911|ref|XP_002193162.2| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
[Taeniopygia guttata]
Length = 741
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 538 QADLISLGKVVLALACNSLSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVN 597
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 598 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 657
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 658 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 717
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 718 TYSDLKRCFENTFQELIAAAN 738
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 582 LILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 641
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 642 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVP 701
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 702 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 738
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++ PHV + P
Sbjct: 250 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYHPAAPHVAYMQPK 292
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVDNYH
Sbjct: 293 A---NAPSFFMADELRQELINRHLITMAQIDQADIPAVPAEVDNYH 335
>gi|334330547|ref|XP_001376271.2| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3-like
[Monodelphis domestica]
Length = 1007
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 804 QADLMSLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVN 863
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 864 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 923
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 924 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 983
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 984 TYSDLKRCFENTFQELIAAAN 1004
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 848 LILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 907
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 908 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 967
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 968 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 1004
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 516 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 558
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 559 A---NAPSFFMADELRQELINRHLITMAQIDQADVPAVPAEVDSYH 601
>gi|417413073|gb|JAA52883.1| Putative polya ribonuclease subunit, partial [Desmodus rotundus]
Length = 902
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 699 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 758
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 759 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 818
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 819 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 878
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 879 TYSDLKRCFENTFQELIAAAN 899
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 743 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 802
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 803 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 862
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 863 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 899
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 9 QENFGGTTYFYQ--APSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKP 66
+E GGTTYFY P+ T + + ++ P Y ++P T PHV +
Sbjct: 391 KETVGGTTYFYTDTTPAPLTGMRSFKNYHRTACRTEGQIIEVFPNYHIYPPTAPHVAYMQ 450
Query: 67 PNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 451 PKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPAEVDSYH 495
>gi|326914246|ref|XP_003203437.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Meleagris gallopavo]
Length = 781
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 578 QTDLISLGKVVLALACNSLSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVN 637
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 638 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 697
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 698 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 757
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 758 TYSDLKRCFENTFQELIAAAN 778
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 622 LILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 681
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 682 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVP 741
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 742 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 778
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++ PHV + P
Sbjct: 290 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYHPAAPHVAYMQPK 332
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 333 A---NAPSFFMADELRQELINRHLITMAQVDQADIPAVPAEVDSYH 375
>gi|392352285|ref|XP_002727976.2| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like isoform 1 [Rattus norvegicus]
Length = 829
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 165/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 626 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 685
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 686 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 745
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L SRDE+SVLVV
Sbjct: 746 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLTSRDEKSVLVV 805
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 806 TYSDLKRCFENTFQELIAAAN 826
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 129/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 670 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 729
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 730 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 789
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 790 EKISLTSRDEKSVLVVTYSDLKRCFENTFQELIAAAN 826
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 337 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 379
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 380 A---NAPSFFMADELRQELINRHLITMAQIDQADLPAVPTEVDSYH 422
>gi|291236234|ref|XP_002738047.1| PREDICTED: PAN3 poly(A) specific ribonuclease subunit homolog
[Saccoglossus kowalevskii]
Length = 764
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 168/207 (81%), Gaps = 1/207 (0%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-R 172
H Q+DL +LGK++LA+ C S++ +QREN+Q S++L+A +YS DL+NLILYLL+ + R
Sbjct: 544 HYQQEDLVSLGKVVLALACHSVLGIQRENIQASMELVAVNYSEDLKNLILYLLTNQNRLR 603
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
+V D+MPMIGAR+YTQLDA Q+ D +E +LSKE++NGRL RLL KL TI ERPE ++DP
Sbjct: 604 SVNDIMPMIGARFYTQLDAAQMRSDVIEEDLSKEVQNGRLMRLLAKLNTICERPEFSMDP 663
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
TWSETGDRY+LKLFRD++ HQV + G PW+D++HIV+CLNKLDAG EK+CLMSRDEQ+V
Sbjct: 664 TWSETGDRYLLKLFRDHVFHQVSDTGAPWMDLAHIVYCLNKLDAGAPEKVCLMSRDEQNV 723
Query: 293 LVVSYAELKQCLDQSFHELSSSASLTP 319
LVVSY++LK C + +F E+ + TP
Sbjct: 724 LVVSYSDLKVCFENTFSEILQANQSTP 750
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 128/158 (81%), Gaps = 1/158 (0%)
Query: 325 LYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +LSKE++NGRL RLL KL T
Sbjct: 593 LYLLTNQNRLRSVNDIMPMIGARFYTQLDAAQMRSDVIEEDLSKEVQNGRLMRLLAKLNT 652
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I ERPE ++DPTWSETGDRY+LKLFRD++ HQV + G PW+D++HIV+CLNKLDAG EK
Sbjct: 653 ICERPEFSMDPTWSETGDRYLLKLFRDHVFHQVSDTGAPWMDLAHIVYCLNKLDAGAPEK 712
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTP 481
+CLMSRDEQ+VLVVSY++LK C + +F E+ + TP
Sbjct: 713 VCLMSRDEQNVLVVSYSDLKVCFENTFSEILQANQSTP 750
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 19/108 (17%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
QEN GGTTYFY E AA P GV P + ++P PP V + P
Sbjct: 258 QENIGGTTYFYTQ-----EQMQAAQPT--------GVY---PSFHVYPSEPPSVSYMTPK 301
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
+ SF++S+ +R +I H++ T+ + + +P+LP EVDNYH L
Sbjct: 302 P---NAPSFFLSDELRIDIIHRHLQTMTTVDLAQYPDLPTEVDNYHTL 346
>gi|149034837|gb|EDL89557.1| rCG42764 [Rattus norvegicus]
Length = 251
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/207 (61%), Positives = 168/207 (81%), Gaps = 1/207 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 44 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 103
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 104 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 163
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L SRDE+SVLVV
Sbjct: 164 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLTSRDEKSVLVV 223
Query: 296 SYAELKQCLDQSFHELSSSASLTPKST 322
+Y++LK+C + +F EL ++A+ +S+
Sbjct: 224 TYSDLKRCFENTFQELIAAANGNDRSS 250
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 132/164 (80%), Gaps = 1/164 (0%)
Query: 322 TLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL K
Sbjct: 87 NLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAK 146
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
LGTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 147 LGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGV 206
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKST 484
EKI L SRDE+SVLVV+Y++LK+C + +F EL ++A+ +S+
Sbjct: 207 PEKISLTSRDEKSVLVVTYSDLKRCFENTFQELIAAANGNDRSS 250
>gi|12849134|dbj|BAB28221.1| unnamed protein product [Mus musculus]
Length = 251
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 44 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 103
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 104 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 163
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 164 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 223
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 224 TYSDLKRCFENTFQELIAAAN 244
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 130/158 (82%), Gaps = 1/158 (0%)
Query: 322 TLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL K
Sbjct: 87 NLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAK 146
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
LGTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 147 LGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGV 206
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 207 PEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 244
>gi|301782101|ref|XP_002926467.1| PREDICTED: LOW QUALITY PROTEIN: PAB-dependent poly(A)-specific
ribonuclease subunit 3-like [Ailuropoda melanoleuca]
Length = 899
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 696 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 755
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 756 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 815
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 816 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 875
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 876 TYSDLKRCFENTFQELIAAAN 896
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 740 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 799
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 800 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 859
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 860 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 896
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 407 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 449
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 450 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 492
>gi|395520847|ref|XP_003764534.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
[Sarcophilus harrisii]
Length = 859
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 656 QADLMSLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVN 715
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 716 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 775
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 776 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 835
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 836 TYSDLKRCFENTFQELIAAAN 856
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 700 LILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 759
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 760 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 819
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 820 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 856
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 368 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 410
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 411 A---NAPSFFMADELRQELINRHLITMAQIDQADIPAVPAEVDSYH 453
>gi|118764013|gb|AAI28180.1| PAN3 protein [Homo sapiens]
Length = 553
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 350 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 409
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 410 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 469
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 470 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 529
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 530 TYSDLKRCFENTFQELIAAAN 550
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 394 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 453
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 454 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 513
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 514 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 550
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 58 VIQKETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYM 100
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 101 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 146
>gi|62859819|ref|NP_001017301.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Xenopus
(Silurana) tropicalis]
gi|206558099|sp|A1L1C7.1|PAN3_XENTR RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit 3
gi|120537284|gb|AAI28995.1| PAN3 poly(A) specific ribonuclease subunit homolog [Xenopus
(Silurana) tropicalis]
Length = 787
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 165/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 584 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTEQNRMRSVN 643
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DP WS
Sbjct: 644 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPAWS 703
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 704 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLISRDEKSVLVV 763
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 764 TYSDLKRCFENTFQELVAAAN 784
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 129/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 628 LILYLLTEQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 687
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DP WSETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG
Sbjct: 688 GTINERPEFQKDPAWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVP 747
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 748 EKISLISRDEKSVLVVTYSDLKRCFENTFQELVAAAN 784
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ + GGTTYFY D AP P Y ++P T PH+ +
Sbjct: 294 IIQKATVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHIAYM 336
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 337 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPGVPAEVDSYH 382
>gi|431920973|gb|ELK18742.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Pteropus
alecto]
Length = 796
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 165/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 593 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 652
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 653 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 712
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L SRDE+SVLVV
Sbjct: 713 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLTSRDEKSVLVV 772
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 773 TYSDLKRCFENTFQELIAAAN 793
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/155 (65%), Positives = 128/155 (82%), Gaps = 1/155 (0%)
Query: 325 LYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGT
Sbjct: 639 LYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGT 698
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
INERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EK
Sbjct: 699 INERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEK 758
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
I L SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 759 ISLTSRDEKSVLVVTYSDLKRCFENTFQELIAAAN 793
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 304 KETVGGTTYFYT-----------------DTTPAPVTGMVFPNYHIYPPTAPHVAYMQPK 346
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 347 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 389
>gi|47223350|emb|CAG04211.1| unnamed protein product [Tetraodon nigroviridis]
Length = 706
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 165/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L++ +YS+DL+NLILYLL+ + R+V
Sbjct: 503 QADLVSLGKVVLALACNSLAGIQRENLQKAMELVSLNYSSDLKNLILYLLTEQSRLRSVN 562
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DP WS
Sbjct: 563 DIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPAWS 622
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 623 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVV 682
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C D +F EL S AS
Sbjct: 683 TYSDLKRCFDNTFQELQSVAS 703
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/157 (67%), Positives = 128/157 (81%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 547 LILYLLTEQSRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKL 606
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DP WSETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG
Sbjct: 607 GTINERPEFQKDPAWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVP 666
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C D +F EL S AS
Sbjct: 667 EKISLVSRDEKSVLVVTYSDLKRCFDNTFQELQSVAS 703
>gi|344237262|gb|EGV93365.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Cricetulus
griseus]
Length = 213
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 6 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 65
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 66 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 125
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 126 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 185
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 186 TYSDLKRCFENTFQELIAAAN 206
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 130/158 (82%), Gaps = 1/158 (0%)
Query: 322 TLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL K
Sbjct: 49 NLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAK 108
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
LGTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 109 LGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGV 168
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 169 PEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 206
>gi|52139017|gb|AAH82547.1| Pan3 protein [Mus musculus]
Length = 560
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 353 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 412
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 413 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 472
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 473 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 532
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 533 TYSDLKRCFENTFQELIAAAN 553
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 397 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 456
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 457 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 516
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 517 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 553
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 61 VIQKETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYM 103
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 104 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 149
>gi|68161857|emb|CAI45987.2| hypothetical protein [Homo sapiens]
Length = 234
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 31 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 90
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 91 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 150
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 151 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 210
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 211 TYSDLKRCFENTFQELIAAAN 231
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 130/158 (82%), Gaps = 1/158 (0%)
Query: 322 TLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL K
Sbjct: 74 NLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAK 133
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
LGTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 134 LGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGV 193
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 194 PEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 231
>gi|38453755|dbj|BAD02262.1| PABP1-DEPENDENT POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3 [Homo
sapiens]
Length = 687
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/201 (62%), Positives = 165/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 484 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 543
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 544 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 603
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SR E+SVLVV
Sbjct: 604 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRGEKSVLVV 663
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 664 TYSDLKRCFENTFQELIAAAN 684
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 129/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 528 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 587
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 588 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 647
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SR E+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 648 EKISLISRGEKSVLVVTYSDLKRCFENTFQELIAAAN 684
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHK 65
+ +E GGTTYFY D AP P Y ++P T PHV +
Sbjct: 192 VIQKETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYM 234
Query: 66 PPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 235 QPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 280
>gi|321458957|gb|EFX70016.1| hypothetical protein DAPPUDRAFT_61690 [Daphnia pulex]
Length = 490
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 173/211 (81%), Gaps = 4/211 (1%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ--- 170
H Q+DL ALGKLILA+ C SL+A+QR+N+ TS+D++ ++YS+DLRNL++YLLS Q
Sbjct: 268 HYQQEDLLALGKLILALACNSLLALQRDNVSTSMDIINKNYSSDLRNLVMYLLSTTQGSR 327
Query: 171 KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
+ + ++MPMIGAR+++QL+A LH D LE++L++E++NGRLFRLL KLGT+ +RPELNL
Sbjct: 328 SKNIQEVMPMIGARFFSQLEAATLHADYLEDQLARELDNGRLFRLLGKLGTVVDRPELNL 387
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D TWSETGDRY+LKLFRDY+LH +DGRPW+D++HIV CLN+LD + +KICL SRD+Q
Sbjct: 388 DSTWSETGDRYLLKLFRDYMLHPCTDDGRPWVDLAHIVACLNRLDTASHDKICLTSRDQQ 447
Query: 291 SVLVVSYAELKQCLDQSFHELSSSASLTPKS 321
+VLVVSYAEL CL+ SF+EL A+L P S
Sbjct: 448 NVLVVSYAELHHCLETSFNEL-QQAALAPSS 477
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 132/164 (80%), Gaps = 4/164 (2%)
Query: 323 LPLYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV 379
L +YLLS Q + + ++MPMIGAR+++QL+A LH D LE++L++E++NGRLFRLL
Sbjct: 315 LVMYLLSTTQGSRSKNIQEVMPMIGARFFSQLEAATLHADYLEDQLARELDNGRLFRLLG 374
Query: 380 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
KLGT+ +RPELNLD TWSETGDRY+LKLFRDY+LH +DGRPW+D++HIV CLN+LD
Sbjct: 375 KLGTVVDRPELNLDSTWSETGDRYLLKLFRDYMLHPCTDDGRPWVDLAHIVACLNRLDTA 434
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKS 483
+ +KICL SRD+Q+VLVVSYAEL CL+ SF+EL A+L P S
Sbjct: 435 SHDKICLTSRDQQNVLVVSYAELHHCLETSFNEL-QQAALAPSS 477
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 35/42 (83%)
Query: 75 SSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
SSF+M+E+IRA++ +N++ L ++P LFP+LP EVD+YH+L
Sbjct: 21 SSFFMNEDIRADLLQRNSVALSISDPALFPDLPTEVDHYHEL 62
>gi|47077616|dbj|BAD18690.1| unnamed protein product [Homo sapiens]
Length = 472
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 269 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 328
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 329 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 388
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 389 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 448
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 449 TYSDLKRCFENTFQELIAAAN 469
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 130/158 (82%), Gaps = 1/158 (0%)
Query: 322 TLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL K
Sbjct: 312 NLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAK 371
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
LGTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 372 LGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGV 431
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 432 PEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 469
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 50 PGYTMHPGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLE 109
P Y ++P T PHV + P A + SF+M++ +R E+ +++ +T+ + P +P E
Sbjct: 4 PNYHIYPPTAPHVAYMQPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTE 60
Query: 110 VDNYH 114
VD+YH
Sbjct: 61 VDSYH 65
>gi|198431047|ref|XP_002126069.1| PREDICTED: similar to PAN3 polyA specific ribonuclease subunit
homolog (S. cerevisiae) [Ciona intestinalis]
Length = 797
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 125/200 (62%), Positives = 163/200 (81%), Gaps = 1/200 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q+D+ ALGK++LA+ C S+ ++QR+N SI+L+ +YS DL+NLI+YLL+ Q+ V
Sbjct: 596 QEDMVALGKVVLALACNSVSSIQRDNFPKSIELVVMNYSNDLKNLIMYLLTPQQRPHNVN 655
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA L D +ENE++KE+ENGRLFR+L KLG INERPE ++ TWS
Sbjct: 656 DIMPMIGARFYTQLDAALLRCDVIENEMAKEVENGRLFRMLSKLGVINERPEFGMEATWS 715
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+DM+HIV CLNKLDAG EK+CLMSRDEQ+VLVV
Sbjct: 716 ETGDRYLLKLFRDHLFHQVTETGAPWVDMAHIVQCLNKLDAGVPEKLCLMSRDEQNVLVV 775
Query: 296 SYAELKQCLDQSFHELSSSA 315
SYAELK+ ++ F EL++++
Sbjct: 776 SYAELKKAFEKCFQELTNAS 795
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 127/154 (82%), Gaps = 1/154 (0%)
Query: 325 LYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
+YLL+ Q+ V D+MPMIGAR+YTQLDA L D +ENE++KE+ENGRLFR+L KLG
Sbjct: 642 MYLLTPQQRPHNVNDIMPMIGARFYTQLDAALLRCDVIENEMAKEVENGRLFRMLSKLGV 701
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
INERPE ++ TWSETGDRY+LKLFRD+L HQV E G PW+DM+HIV CLNKLDAG EK
Sbjct: 702 INERPEFGMEATWSETGDRYLLKLFRDHLFHQVTETGAPWVDMAHIVQCLNKLDAGVPEK 761
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
+CLMSRDEQ+VLVVSYAELK+ ++ F EL++++
Sbjct: 762 LCLMSRDEQNVLVVSYAELKKAFEKCFQELTNAS 795
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 21/109 (19%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
+QEN GGTTYF+ ++ +P P + + PGTPP++ +
Sbjct: 314 AQEN-GGTTYFFTQNTTRPNLPVVMPP-----------------FHVFPGTPPNIEYM-- 353
Query: 68 NAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
+ + SF+M+ +R I K+ALT+++ + E P +P EVDNYH L
Sbjct: 354 -SLKANAPSFFMANELRQAILQKHALTMLTVDTEQDPSVPAEVDNYHSL 401
>gi|358414777|ref|XP_003582913.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3,
partial [Bos taurus]
Length = 471
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 268 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 327
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 328 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 387
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 388 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 447
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 448 TYSDLKRCFENTFQELIAAAN 468
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 130/158 (82%), Gaps = 1/158 (0%)
Query: 322 TLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL K
Sbjct: 311 NLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAK 370
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
LGTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 371 LGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGV 430
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 431 PEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 468
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 50 PGYTMHPGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLE 109
P Y ++P T PHV + P A + SF+M++ +R E+ +++ +T+ + P +P E
Sbjct: 3 PNYHIYPPTAPHVAYMQPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTE 59
Query: 110 VDNYH 114
VD+YH
Sbjct: 60 VDSYH 64
>gi|62122379|dbj|BAD93184.1| PABP1-DEPENDENT POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3b [Homo
sapiens]
Length = 741
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 126/201 (62%), Positives = 165/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 538 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 597
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 598 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 657
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SR E+SVLVV
Sbjct: 658 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRGEKSVLVV 717
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 718 TYSDLKRCFENTFQELIAAAN 738
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 129/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 582 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 641
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 642 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 701
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SR E+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 702 EKISLISRGEKSVLVVTYSDLKRCFENTFQELIAAAN 738
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 249 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 291
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 292 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 334
>gi|114325405|gb|AAH24318.1| PAN3 protein [Homo sapiens]
gi|119628834|gb|EAX08429.1| hCG30946 [Homo sapiens]
Length = 442
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 239 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 298
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 299 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 358
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 359 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 418
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 419 TYSDLKRCFENTFQELIAAAN 439
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 283 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 342
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 343 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 402
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 403 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 439
>gi|55562823|gb|AAH86321.1| Pan3 protein [Mus musculus]
Length = 408
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 201 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 260
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 261 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 320
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 321 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 380
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 381 TYSDLKRCFENTFQELIAAAN 401
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 130/158 (82%), Gaps = 1/158 (0%)
Query: 322 TLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL K
Sbjct: 244 NLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAK 303
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
LGTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 304 LGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGV 363
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 364 PEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 401
>gi|148673889|gb|EDL05836.1| PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
[Mus musculus]
Length = 302
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 95 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 154
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 155 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 214
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 215 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 274
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 275 TYSDLKRCFENTFQELIAAAN 295
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 130/158 (82%), Gaps = 1/158 (0%)
Query: 322 TLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL K
Sbjct: 138 NLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAK 197
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
LGTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 198 LGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGV 257
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 258 PEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 295
>gi|291410378|ref|XP_002721475.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3
[Oryctolagus cuniculus]
Length = 978
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 126/201 (62%), Positives = 165/201 (82%), Gaps = 1/201 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+ LILYLL+ + R+V
Sbjct: 775 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKYLILYLLTDQNRMRSVN 834
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 835 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 894
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 895 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 954
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 955 TYSDLKRCFENTFQELIAAAN 975
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 102/155 (65%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
Query: 325 LYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGT
Sbjct: 821 LYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGT 880
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
INERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EK
Sbjct: 881 INERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEK 940
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
I L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 941 ISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 975
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 22/111 (19%)
Query: 6 LCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSP--PGYTMHPGTPPHVR 63
+ +E GGTTYFY D AP L+ P Y ++P T PHV
Sbjct: 481 VIQKETVGGTTYFYT-----------------DTTPAPAPLTGMVFPNYHIYPPTAPHVA 523
Query: 64 HKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
+ P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 524 YMQPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPSEVDSYH 571
>gi|115676698|ref|XP_001178132.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like isoform 1 [Strongylocentrotus purpuratus]
Length = 772
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 166/209 (79%), Gaps = 1/209 (0%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-R 172
H Q+DL +LGK+ILA+ C S+ ++QR+ L S+DL+A YSADL+NL+LYLL+ + R
Sbjct: 561 HYQQEDLISLGKVILALACNSVQSIQRQRLSASVDLVAHQYSADLKNLVLYLLTSQPRPR 620
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
+V D+MPMIGAR+YTQLDA + D LE +LS+E++NGRLFRLL KLG +NERPE + D
Sbjct: 621 SVNDIMPMIGARFYTQLDAALMCNDVLEEQLSREIQNGRLFRLLCKLGVMNERPEFHGDV 680
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
W+ETGDRY+LKLFRD+L HQV+E G PW+D+SHIV CLNKLDAG EK+CLMSRDEQ++
Sbjct: 681 QWAETGDRYLLKLFRDHLFHQVKETGNPWIDLSHIVQCLNKLDAGIPEKVCLMSRDEQNI 740
Query: 293 LVVSYAELKQCLDQSFHELSSSASLTPKS 321
LVVSY++LK C +F E+ ++ +P++
Sbjct: 741 LVVSYSDLKHCFQTTFSEVFQASQPSPEN 769
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 139/194 (71%), Gaps = 6/194 (3%)
Query: 291 SVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQK-RTVVDLMPMIGARYYT 349
SV + L +D H+ S+ L LYLL+ + R+V D+MPMIGAR+YT
Sbjct: 581 SVQSIQRQRLSASVDLVAHQYSADLK-----NLVLYLLTSQPRPRSVNDIMPMIGARFYT 635
Query: 350 QLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFR 409
QLDA + D LE +LS+E++NGRLFRLL KLG +NERPE + D W+ETGDRY+LKLFR
Sbjct: 636 QLDAALMCNDVLEEQLSREIQNGRLFRLLCKLGVMNERPEFHGDVQWAETGDRYLLKLFR 695
Query: 410 DYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQS 469
D+L HQV+E G PW+D+SHIV CLNKLDAG EK+CLMSRDEQ++LVVSY++LK C +
Sbjct: 696 DHLFHQVKETGNPWIDLSHIVQCLNKLDAGIPEKVCLMSRDEQNILVVSYSDLKHCFQTT 755
Query: 470 FHELSSSASLTPKS 483
F E+ ++ +P++
Sbjct: 756 FSEVFQASQPSPEN 769
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
+QEN GGTTYFY G VP A A G++ P + ++P TP HV +
Sbjct: 261 TQENIGGTTYFY-TDDQGPAVPQAPANA--------GIVL--PTFHVYPSTPAHVDYMKR 309
Query: 68 NAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
N V+ SF+M E + ++ +K A L + P++P EVDNYH L
Sbjct: 310 N---VNGPSFFMDEEFKIDVLNKQAQALTQLDLAEHPDIPTEVDNYHSL 355
>gi|339243919|ref|XP_003377885.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Trichinella
spiralis]
gi|316973250|gb|EFV56870.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Trichinella
spiralis]
Length = 734
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 156/195 (80%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
QDDL LG+LI ++ C +L +Q+ N +S++ ++R YSADL+NLILYLL + + V++
Sbjct: 530 QDDLVGLGQLIFSLACGNLSPLQQANFASSMEFLSRHYSADLKNLILYLLHGQRSKNVME 589
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
+MPMIGAR+++ LD+ + D LENEL KEMENGRLFR+L KL T+NERP L +DP WSE
Sbjct: 590 IMPMIGARFFSHLDSWLMRVDMLENELIKEMENGRLFRILCKLATVNERPILGMDPQWSE 649
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 296
TGDRY+LKLFRDY+ HQV EDG PWLD+ HI+ CLNKLDAG EKI LMSRDEQ+VL+VS
Sbjct: 650 TGDRYLLKLFRDYVFHQVTEDGSPWLDLGHIIQCLNKLDAGVAEKIMLMSRDEQNVLIVS 709
Query: 297 YAELKQCLDQSFHEL 311
+A+L +CLDQSF E+
Sbjct: 710 FADLHRCLDQSFTEI 724
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 123/152 (80%)
Query: 322 TLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL + + V+++MPMIGAR+++ LD+ + D LENEL KEMENGRLFR+L KL
Sbjct: 573 NLILYLLHGQRSKNVMEIMPMIGARFFSHLDSWLMRVDMLENELIKEMENGRLFRILCKL 632
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
T+NERP L +DP WSETGDRY+LKLFRDY+ HQV EDG PWLD+ HI+ CLNKLDAG
Sbjct: 633 ATVNERPILGMDPQWSETGDRYLLKLFRDYVFHQVTEDGSPWLDLGHIIQCLNKLDAGVA 692
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
EKI LMSRDEQ+VL+VS+A+L +CLDQSF E+
Sbjct: 693 EKIMLMSRDEQNVLIVSFADLHRCLDQSFTEI 724
>gi|260833306|ref|XP_002611598.1| hypothetical protein BRAFLDRAFT_117152 [Branchiostoma floridae]
gi|229296969|gb|EEN67608.1| hypothetical protein BRAFLDRAFT_117152 [Branchiostoma floridae]
Length = 760
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/196 (61%), Positives = 160/196 (81%), Gaps = 1/196 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q+DL +LGK++LA+ C S+ +QRE LQ +++L+ +YS+DL+NLILYLL+ + ++V
Sbjct: 549 QEDLLSLGKVVLALACNSVAGIQREFLQKAMELVTLNYSSDLKNLILYLLTNQGRPKSVN 608
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA + D +E+EL+KE+ENGRLFRLL KLG IN+RP L LD WS
Sbjct: 609 DIMPMIGARFYTQLDAAHMRCDVIESELAKEVENGRLFRLLCKLGIINDRPGLGLDSDWS 668
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRDYL HQV E G PW+DM+H+V CLNKLD G EK+CL+SRDEQSVLV+
Sbjct: 669 ETGDRYLLKLFRDYLFHQVTESGEPWIDMAHVVQCLNKLDTGVPEKLCLVSRDEQSVLVL 728
Query: 296 SYAELKQCLDQSFHEL 311
+Y +LK+C +Q+F E+
Sbjct: 729 NYHDLKRCFEQAFQEV 744
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 123/150 (82%), Gaps = 1/150 (0%)
Query: 325 LYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
LYLL+ + ++V D+MPMIGAR+YTQLDA + D +E+EL+KE+ENGRLFRLL KLG
Sbjct: 595 LYLLTNQGRPKSVNDIMPMIGARFYTQLDAAHMRCDVIESELAKEVENGRLFRLLCKLGI 654
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
IN+RP L LD WSETGDRY+LKLFRDYL HQV E G PW+DM+H+V CLNKLD G EK
Sbjct: 655 INDRPGLGLDSDWSETGDRYLLKLFRDYLFHQVTESGEPWIDMAHVVQCLNKLDTGVPEK 714
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
+CL+SRDEQSVLV++Y +LK+C +Q+F E+
Sbjct: 715 LCLVSRDEQSVLVLNYHDLKRCFEQAFQEV 744
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 11 NFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAA 70
+FGGTTYFY A S P P L P G+ H PH P A
Sbjct: 261 DFGGTTYFYTAGSQHAR----HSPLPAALL--------PGGHLFHL---PHTALMKPKA- 304
Query: 71 TVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
+ SF+M + +R + + L +P P++P EVDNYH L
Sbjct: 305 --NQPSFFMQDELRLDTLRRQYLLAAQIDPVQHPDIPSEVDNYHTL 348
>gi|156377170|ref|XP_001630730.1| predicted protein [Nematostella vectensis]
gi|156217756|gb|EDO38667.1| predicted protein [Nematostella vectensis]
Length = 482
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/206 (61%), Positives = 169/206 (82%), Gaps = 4/206 (1%)
Query: 114 HDLQDDLTALGKLILAM-TCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK- 171
H Q+DLT+LGKL+LA+ +C SL ++QRE++Q S++ +A +YS+DL+NL++YLLS
Sbjct: 275 HFQQEDLTSLGKLVLALASCYSLQSIQREHIQQSLEYVAMNYSSDLKNLVIYLLSNQMTT 334
Query: 172 --RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
++V D+MPMIGAR+YTQL+A Q+ D +E EL+KEMENGRL RLL KLG +NERPEL
Sbjct: 335 HLKSVNDIMPMIGARFYTQLEAAQVKCDVMEGELAKEMENGRLLRLLTKLGVVNERPELG 394
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
+DP+WSETGDRY+LKLFRD++ HQV + G P +D+SH+V CLNKLDAG+ EKICLMSRDE
Sbjct: 395 MDPSWSETGDRYLLKLFRDHVFHQVTDAGTPVVDLSHVVTCLNKLDAGSPEKICLMSRDE 454
Query: 290 QSVLVVSYAELKQCLDQSFHELSSSA 315
QSVLVVSY +L CL+ +F+E+ SS+
Sbjct: 455 QSVLVVSYRDLHNCLESAFNEVLSSS 480
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/159 (64%), Positives = 128/159 (80%), Gaps = 3/159 (1%)
Query: 322 TLPLYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLL 378
L +YLLS ++V D+MPMIGAR+YTQL+A Q+ D +E EL+KEMENGRL RLL
Sbjct: 322 NLVIYLLSNQMTTHLKSVNDIMPMIGARFYTQLEAAQVKCDVMEGELAKEMENGRLLRLL 381
Query: 379 VKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDA 438
KLG +NERPEL +DP+WSETGDRY+LKLFRD++ HQV + G P +D+SH+V CLNKLDA
Sbjct: 382 TKLGVVNERPELGMDPSWSETGDRYLLKLFRDHVFHQVTDAGTPVVDLSHVVTCLNKLDA 441
Query: 439 GTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
G+ EKICLMSRDEQSVLVVSY +L CL+ +F+E+ SS+
Sbjct: 442 GSPEKICLMSRDEQSVLVVSYRDLHNCLESAFNEVLSSS 480
>gi|391325639|ref|XP_003737338.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Metaseiulus occidentalis]
Length = 683
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 128/200 (64%), Positives = 158/200 (79%), Gaps = 5/200 (2%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKR- 172
H ++DL LG+LIL + C + A Q L++S+D + + YS DLRNL+L LL H R
Sbjct: 480 HHQKEDLNGLGRLILCLACNNPTAYQY--LESSLDCVTKHYSTDLRNLLLLLLG-HPLRV 536
Query: 173 -TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 231
T+ D+MPMIGAR+YTQLD+ Q+ D LE EL+KE+ENGRLFRLLVKLG INERPELN+D
Sbjct: 537 TTINDIMPMIGARFYTQLDSAQMRSDVLEAELAKEVENGRLFRLLVKLGAINERPELNMD 596
Query: 232 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 291
TWSETGDRYMLKLFRDYL HQ ++G PWLDM+H+V CLNKLDAG EKICL+SRDEQ+
Sbjct: 597 TTWSETGDRYMLKLFRDYLFHQCTKEGVPWLDMAHVVQCLNKLDAGIDEKICLVSRDEQN 656
Query: 292 VLVVSYAELKQCLDQSFHEL 311
VLVVSY ELK+C++ +F E+
Sbjct: 657 VLVVSYQELKRCIEAAFSEI 676
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/139 (73%), Positives = 121/139 (87%)
Query: 335 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 394
T+ D+MPMIGAR+YTQLD+ Q+ D LE EL+KE+ENGRLFRLLVKLG INERPELN+D
Sbjct: 538 TINDIMPMIGARFYTQLDSAQMRSDVLEAELAKEVENGRLFRLLVKLGAINERPELNMDT 597
Query: 395 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 454
TWSETGDRYMLKLFRDYL HQ ++G PWLDM+H+V CLNKLDAG EKICL+SRDEQ+V
Sbjct: 598 TWSETGDRYMLKLFRDYLFHQCTKEGVPWLDMAHVVQCLNKLDAGIDEKICLVSRDEQNV 657
Query: 455 LVVSYAELKQCLDQSFHEL 473
LVVSY ELK+C++ +F E+
Sbjct: 658 LVVSYQELKRCIEAAFSEI 676
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 17/114 (14%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSP------PGYTMHPGTPPHV 62
QE+ GGTTYFYQ P AP +++ PG S P P + +PG P HV
Sbjct: 161 QESLGGTTYFYQ--------PHEENGAPQNEMLPPGPASHPESEIIPPTFHAYPGPPTHV 212
Query: 63 RHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
H P A + SF+M +++R E+ ++ ++ N +LFP+LP ++DNY ++
Sbjct: 213 DHMKPKA---NAPSFFMPDDLRLELLNRASILNARCNLDLFPDLPQQIDNYTNI 263
>gi|357607520|gb|EHJ65559.1| hypothetical protein KGM_15151 [Danaus plexippus]
Length = 623
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/202 (56%), Positives = 159/202 (78%), Gaps = 5/202 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL--SVHQKRTV 174
Q+DL ALG+LIL++ CR+ V +N+ +DL+AR+YS DL+N+++YLL S + +RT+
Sbjct: 423 QEDLVALGRLILSLACRT---VHCDNINACMDLVARTYSMDLKNMLMYLLTPSPNVRRTI 479
Query: 175 VDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
D+MPMIGAR++TQ++A++ D+ E +L E++NGRL R+L+KLG INERPELN+D +W
Sbjct: 480 TDIMPMIGARFFTQVEALERRSDAFEEQLVNEIDNGRLLRILIKLGIINERPELNMDTSW 539
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
SETGDRYMLKLFRD++ H V DGRPWLD +H+ LN LD G +K+ LMSRDEQSVLV
Sbjct: 540 SETGDRYMLKLFRDHIFHSVTPDGRPWLDRAHVAAALNNLDGGNLDKVELMSRDEQSVLV 599
Query: 295 VSYAELKQCLDQSFHELSSSAS 316
VSYAELK CL+ ++ E+ ++A+
Sbjct: 600 VSYAELKHCLENAYEEVMAAAA 621
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 124/156 (79%), Gaps = 2/156 (1%)
Query: 325 LYLL--SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG 382
+YLL S + +RT+ D+MPMIGAR++TQ++A++ D+ E +L E++NGRL R+L+KLG
Sbjct: 466 MYLLTPSPNVRRTITDIMPMIGARFFTQVEALERRSDAFEEQLVNEIDNGRLLRILIKLG 525
Query: 383 TINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQE 442
INERPELN+D +WSETGDRYMLKLFRD++ H V DGRPWLD +H+ LN LD G +
Sbjct: 526 IINERPELNMDTSWSETGDRYMLKLFRDHIFHSVTPDGRPWLDRAHVAAALNNLDGGNLD 585
Query: 443 KICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
K+ LMSRDEQSVLVVSYAELK CL+ ++ E+ ++A+
Sbjct: 586 KVELMSRDEQSVLVVSYAELKHCLENAYEEVMAAAA 621
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 9 QENFGGTTYFYQA------PSSGTEVPGAAGPAPGDDLSAPGV-LSSPPGYTMHPGTPPH 61
QEN GGTTYFY S+ P A GP D+ GV ++SP M+ G
Sbjct: 122 QENVGGTTYFYSTNADSLNASAVMNTPAAMGP----DVMGVGVPVASPYASQMYAGP--- 174
Query: 62 VRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLT 121
H N + +FYM E IR EI + + +P +P++P VD Y +L L
Sbjct: 175 TTHSGANHKSGLAQAFYMPETIREEIYQRAQDVFLQHDPMAYPDIPEVVDRYAELV-PLE 233
Query: 122 ALGKLILAMTCRS 134
A G LA + R+
Sbjct: 234 ATGAHALATSYRA 246
>gi|449677530|ref|XP_002166428.2| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Hydra magnipapillata]
Length = 632
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 118/202 (58%), Positives = 154/202 (76%), Gaps = 3/202 (1%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS---VHQ 170
H Q+DL + GKLILA+ C ++ AV R+N+Q S++ +AR YS DL+ LI +LLS
Sbjct: 425 HYQQEDLVSFGKLILALACYTVEAVHRDNMQLSLEFVARHYSNDLKTLIWHLLSSQITSN 484
Query: 171 KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
+ ++MP+IGAR+Y+QLD+ Q + LENELSKE++NGRL R+L KLGTI ER E N+
Sbjct: 485 PHNINEVMPVIGARFYSQLDSAQARCELLENELSKELDNGRLLRILAKLGTILERSEFNM 544
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
DP WSETGDRY+LKLFRDYL HQV E G PW+D +HIV LNKLD+G+ E+ICL SRDEQ
Sbjct: 545 DPEWSETGDRYLLKLFRDYLFHQVTETGSPWIDFAHIVSVLNKLDSGSSERICLSSRDEQ 604
Query: 291 SVLVVSYAELKQCLDQSFHELS 312
S+LVVSY ++K CL+ +F EL+
Sbjct: 605 SILVVSYHDIKACLETAFSELT 626
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 120/156 (76%), Gaps = 3/156 (1%)
Query: 322 TLPLYLLS---VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLL 378
TL +LLS + ++MP+IGAR+Y+QLD+ Q + LENELSKE++NGRL R+L
Sbjct: 471 TLIWHLLSSQITSNPHNINEVMPVIGARFYSQLDSAQARCELLENELSKELDNGRLLRIL 530
Query: 379 VKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDA 438
KLGTI ER E N+DP WSETGDRY+LKLFRDYL HQV E G PW+D +HIV LNKLD+
Sbjct: 531 AKLGTILERSEFNMDPEWSETGDRYLLKLFRDYLFHQVTETGSPWIDFAHIVSVLNKLDS 590
Query: 439 GTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
G+ E+ICL SRDEQS+LVVSY ++K CL+ +F EL+
Sbjct: 591 GSSERICLSSRDEQSILVVSYHDIKACLETAFSELT 626
>gi|324506251|gb|ADY42673.1| Unknown [Ascaris suum]
Length = 662
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/202 (56%), Positives = 155/202 (76%), Gaps = 4/202 (1%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
H Q+DL LG++I+A+ SL A +RENL S+ ++++ Y+AD++N+I LLS +
Sbjct: 438 HQQQEDLCGLGRVIVALAMGSLHAARRENLSASLAVISQHYTADMKNIISLLLSASVQGS 497
Query: 172 --RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
R++ ++MPMIGAR+Y QL+ Q+ D LENELSKE+ENGRLFRLL KL TI ERP+
Sbjct: 498 RVRSINEVMPMIGARFYAQLELAQMKNDLLENELSKELENGRLFRLLCKLNTIIERPQFQ 557
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
+D +WSETGDRY+LKLFRDYL HQV E G+PW+DM+HI+ CLNKLDAG EKI L+SRD
Sbjct: 558 MDMSWSETGDRYLLKLFRDYLFHQVTEAGKPWIDMAHIISCLNKLDAGLNEKIQLVSRDG 617
Query: 290 QSVLVVSYAELKQCLDQSFHEL 311
+VLVVS+ +L++CL+ +F EL
Sbjct: 618 DNVLVVSFLDLRRCLENAFREL 639
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/206 (50%), Positives = 143/206 (69%), Gaps = 4/206 (1%)
Query: 272 NKLDAGTQEKICLMSRDEQSVLVVS-YAELKQCLDQSFHELSSSASLTPKSTLPLYLLSV 330
N + QE +C + R ++ + S +A ++ L S +S + K+ + L L +
Sbjct: 434 NSIQHQQQEDLCGLGRVIVALAMGSLHAARRENLSASLAVISQHYTADMKNIISLLLSAS 493
Query: 331 HQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINER 387
Q R++ ++MPMIGAR+Y QL+ Q+ D LENELSKE+ENGRLFRLL KL TI ER
Sbjct: 494 VQGSRVRSINEVMPMIGARFYAQLELAQMKNDLLENELSKELENGRLFRLLCKLNTIIER 553
Query: 388 PELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLM 447
P+ +D +WSETGDRY+LKLFRDYL HQV E G+PW+DM+HI+ CLNKLDAG EKI L+
Sbjct: 554 PQFQMDMSWSETGDRYLLKLFRDYLFHQVTEAGKPWIDMAHIISCLNKLDAGLNEKIQLV 613
Query: 448 SRDEQSVLVVSYAELKQCLDQSFHEL 473
SRD +VLVVS+ +L++CL+ +F EL
Sbjct: 614 SRDGDNVLVVSFLDLRRCLENAFREL 639
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 9 QENFGGTTYFY-QAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
QEN+GGTTYF+ Q ++G E P P G ++ + PG + G PH+ P
Sbjct: 151 QENYGGTTYFFQQGANAGLEQPREDQPNDGR------IVVTTPGCFAYQGPLPHIGKFKP 204
Query: 68 NAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
+T SF+ S ++ E+ + A+P ++ +LP ++++ +L
Sbjct: 205 KGSTAQ--SFFTSPELKMELLQRQLAVQCRADPTVYGDLPQALEHFQNL 251
>gi|393909796|gb|EFO28162.2| PAB-dependent Poly(A) specific ribonuclease subunit [Loa loa]
Length = 653
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 154/211 (72%), Gaps = 2/211 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKR--TV 174
QDDL LG++++A+ SL A +REN+ S+ ++ + + DL+N+I LL +R ++
Sbjct: 439 QDDLNGLGRVLIALAMGSLHATRRENISNSMSIINQQCTTDLKNIITLLLQASTQRPHSI 498
Query: 175 VDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
++MPMIGAR+Y QL+ Q+ D LENELSKE+ENGRLFRLL KL TI ER E +D +W
Sbjct: 499 NEVMPMIGARFYAQLETTQMKNDLLENELSKELENGRLFRLLCKLNTITERAEFQMDMSW 558
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
SETGDRY+LKLFRDYL HQ+ E G+PW+DM+HIV LNKLDAG EKI L+SRD ++VLV
Sbjct: 559 SETGDRYLLKLFRDYLFHQITETGKPWIDMAHIVTSLNKLDAGVNEKIQLVSRDGENVLV 618
Query: 295 VSYAELKQCLDQSFHELSSSASLTPKSTLPL 325
VSY +L++CL+ +F EL + P LP+
Sbjct: 619 VSYTDLRRCLENAFSELQNRPPSIPNPLLPV 649
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 263/523 (50%), Gaps = 66/523 (12%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHV-RHKPP 67
QENFGGTTYF+ ++ + + P D V + G ++ G PH+ ++KPP
Sbjct: 149 QENFGGTTYFFTPTTTNSTIADGQSSVPQKDDR---VYVTTNGNFVYHGPLPHIGKYKPP 205
Query: 68 NAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLTALGKLI 127
S++ ++ E+ + A P L+P++P V+ + +L K +
Sbjct: 206 RGL-----SYFTPPELKMELLQRQLAIQCRAEPLLYPDIPQNVEYFQNLVPLENV--KFV 258
Query: 128 LAMTCRSLMAVQRENLQTSID-------LMARSYSADLRNLILYLLSVHQKR----TVVD 176
R ++ + +I+ + R ++ + + L+ + K+ VV
Sbjct: 259 GGHMERGIIGSHITTVYKAINGRDGMPYCLRRIHNFRVNAMKQLSLADNWKKLMHVNVVQ 318
Query: 177 LMPMIGARYY---TQLDAVQLHGDSLENELSKEMENGRLFRL--LVKLGTI----NERPE 227
L +I R + + L A H LS+ ++N L RL KLG I P
Sbjct: 319 LRDVIQTRQFGDHSLLFAYDYH------PLSETLKNRHLNRLNGSSKLGPIANLPGSGPV 372
Query: 228 LNLDPTWSETGDRYMLKLFRDY-LLHQVQEDGRPWLDMSHIV------------HCLNKL 274
+ WS Y+++L +H R +D S I+ L+ +
Sbjct: 373 VQESLMWS-----YIVQLSSALRAIHSAGMAART-VDPSKIIVFDKTKVMLSSCGILDVI 426
Query: 275 DAGTQEKICLMSRDEQS----VLVVS-----YAELKQCLDQSFHELSSSASLTPKSTLPL 325
+ G+ I L +D+ + VL+ +A ++ + S ++ + K+ + L
Sbjct: 427 NPGSDHTIQLYQQDDLNGLGRVLIALAMGSLHATRRENISNSMSIINQQCTTDLKNIITL 486
Query: 326 YLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
L + Q+ ++ ++MPMIGAR+Y QL+ Q+ D LENELSKE+ENGRLFRLL KL TI
Sbjct: 487 LLQASTQRPHSINEVMPMIGARFYAQLETTQMKNDLLENELSKELENGRLFRLLCKLNTI 546
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
ER E +D +WSETGDRY+LKLFRDYL HQ+ E G+PW+DM+HIV LNKLDAG EKI
Sbjct: 547 TERAEFQMDMSWSETGDRYLLKLFRDYLFHQITETGKPWIDMAHIVTSLNKLDAGVNEKI 606
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPL 487
L+SRD ++VLVVSY +L++CL+ +F EL + P LP+
Sbjct: 607 QLVSRDGENVLVVSYTDLRRCLENAFSELQNRPPSIPNPLLPV 649
>gi|312065687|ref|XP_003135911.1| PAB-dependent Poly(A) specific ribonuclease subunit [Loa loa]
Length = 630
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 154/211 (72%), Gaps = 2/211 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKR--TV 174
QDDL LG++++A+ SL A +REN+ S+ ++ + + DL+N+I LL +R ++
Sbjct: 416 QDDLNGLGRVLIALAMGSLHATRRENISNSMSIINQQCTTDLKNIITLLLQASTQRPHSI 475
Query: 175 VDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
++MPMIGAR+Y QL+ Q+ D LENELSKE+ENGRLFRLL KL TI ER E +D +W
Sbjct: 476 NEVMPMIGARFYAQLETTQMKNDLLENELSKELENGRLFRLLCKLNTITERAEFQMDMSW 535
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
SETGDRY+LKLFRDYL HQ+ E G+PW+DM+HIV LNKLDAG EKI L+SRD ++VLV
Sbjct: 536 SETGDRYLLKLFRDYLFHQITETGKPWIDMAHIVTSLNKLDAGVNEKIQLVSRDGENVLV 595
Query: 295 VSYAELKQCLDQSFHELSSSASLTPKSTLPL 325
VSY +L++CL+ +F EL + P LP+
Sbjct: 596 VSYTDLRRCLENAFSELQNRPPSIPNPLLPV 626
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 260/505 (51%), Gaps = 53/505 (10%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHV-RHKPP 67
QENFGGTTYF+ ++ + + P D V + G ++ G PH+ ++KPP
Sbjct: 149 QENFGGTTYFFTPTTTNSTIADGQSSVPQKDDR---VYVTTNGNFVYHGPLPHIGKYKPP 205
Query: 68 NAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLTALG--K 125
S++ ++ E+ + A P L+P++P V+ + +L L K
Sbjct: 206 RGL-----SYFTPPELKMELLQRQLAIQCRAEPLLYPDIPQNVEYFQ----NLVPLENVK 256
Query: 126 LILAMTCRSLMAVQRENLQTSID-------LMARSYSADLRNLILYLLSVHQKR----TV 174
+ R ++ + +I+ + R ++ + + L+ + K+ V
Sbjct: 257 FVGGHMERGIIGSHITTVYKAINGRDGMPYCLRRIHNFRVNAMKQLSLADNWKKLMHVNV 316
Query: 175 VDLMPMIGARYY---TQLDAVQLHGDSLENELSKEMENGRLFRL--LVKLGTI----NER 225
V L +I R + + L A H LS+ ++N L RL KLG I
Sbjct: 317 VQLRDVIQTRQFGDHSLLFAYDYH------PLSETLKNRHLNRLNGSSKLGPIANLPGSG 370
Query: 226 PELNLDPTWSETGDRYMLKLFRDY-LLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICL 284
P + WS Y+++L +H R +D S I+ +K Q+ +
Sbjct: 371 PVVQESLMWS-----YIVQLSSALRAIHSAGMAART-VDPSKII-VFDKTKQ--QDDLNG 421
Query: 285 MSRDEQSVLVVS-YAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQK-RTVVDLMPM 342
+ R ++ + S +A ++ + S ++ + K+ + L L + Q+ ++ ++MPM
Sbjct: 422 LGRVLIALAMGSLHATRRENISNSMSIINQQCTTDLKNIITLLLQASTQRPHSINEVMPM 481
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDR 402
IGAR+Y QL+ Q+ D LENELSKE+ENGRLFRLL KL TI ER E +D +WSETGDR
Sbjct: 482 IGARFYAQLETTQMKNDLLENELSKELENGRLFRLLCKLNTITERAEFQMDMSWSETGDR 541
Query: 403 YMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAEL 462
Y+LKLFRDYL HQ+ E G+PW+DM+HIV LNKLDAG EKI L+SRD ++VLVVSY +L
Sbjct: 542 YLLKLFRDYLFHQITETGKPWIDMAHIVTSLNKLDAGVNEKIQLVSRDGENVLVVSYTDL 601
Query: 463 KQCLDQSFHELSSSASLTPKSTLPL 487
++CL+ +F EL + P LP+
Sbjct: 602 RRCLENAFSELQNRPPSIPNPLLPV 626
>gi|170591552|ref|XP_001900534.1| PABP1-DEPENDENT POLY [Brugia malayi]
gi|158592146|gb|EDP30748.1| PABP1-DEPENDENT POLY, putative [Brugia malayi]
Length = 630
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 157/211 (74%), Gaps = 2/211 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKR--TV 174
QDDL LG++++A+ SL AV+REN+ SI ++++ + DL+N+I LL +R ++
Sbjct: 416 QDDLNGLGRVLIALAMGSLHAVRRENISNSISIISQQCTTDLKNIITLLLQASTQRPHSI 475
Query: 175 VDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
++MPMIGAR+Y QL+ Q+ D LENELSKE+ENGRLFRLL KL TI ER E +D +W
Sbjct: 476 NEVMPMIGARFYAQLETTQMKNDLLENELSKELENGRLFRLLCKLNTITERAEFQMDVSW 535
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
SETGDRY+LKLFRDYL HQ+ E G+PW+DM+HIV LNKLDAG EKI L+SRD ++VLV
Sbjct: 536 SETGDRYLLKLFRDYLFHQITETGKPWIDMAHIVTSLNKLDAGVNEKIQLVSRDGENVLV 595
Query: 295 VSYAELKQCLDQSFHELSSSASLTPKSTLPL 325
VSY +L++CL+ +F EL + P + LP+
Sbjct: 596 VSYTDLRRCLENAFSELQNRPPSIPNTLLPV 626
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 121/159 (76%)
Query: 329 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 388
S + ++ ++MPMIGAR+Y QL+ Q+ D LENELSKE+ENGRLFRLL KL TI ER
Sbjct: 468 STQRPHSINEVMPMIGARFYAQLETTQMKNDLLENELSKELENGRLFRLLCKLNTITERA 527
Query: 389 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 448
E +D +WSETGDRY+LKLFRDYL HQ+ E G+PW+DM+HIV LNKLDAG EKI L+S
Sbjct: 528 EFQMDVSWSETGDRYLLKLFRDYLFHQITETGKPWIDMAHIVTSLNKLDAGVNEKIQLVS 587
Query: 449 RDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPL 487
RD ++VLVVSY +L++CL+ +F EL + P + LP+
Sbjct: 588 RDGENVLVVSYTDLRRCLENAFSELQNRPPSIPNTLLPV 626
>gi|355709196|gb|AES03511.1| PAN3 poly specific ribonuclease subunit-like protein [Mustela
putorius furo]
Length = 367
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 136/166 (81%), Gaps = 1/166 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 202 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 261
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 262 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 321
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 281
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EK
Sbjct: 322 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEK 367
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/122 (68%), Positives = 100/122 (81%), Gaps = 1/122 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 246 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 305
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 306 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 365
Query: 442 EK 443
EK
Sbjct: 366 EK 367
>gi|402590578|gb|EJW84508.1| hypothetical protein WUBG_04581 [Wuchereria bancrofti]
Length = 238
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 157/211 (74%), Gaps = 2/211 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKR--TV 174
QDDL LG++++A+ SL AV+REN+ SI ++++ + DL+N+I LL +R ++
Sbjct: 24 QDDLNGLGRVLIALAMGSLHAVRRENISNSISIISQQCTTDLKNIITLLLQASTQRPHSI 83
Query: 175 VDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
++MPMIGAR+Y QL+ Q+ D LENELSKE+ENGRLFRLL KL TI ER E +D +W
Sbjct: 84 NEVMPMIGARFYAQLETTQMKNDLLENELSKELENGRLFRLLCKLNTITERAEFQMDVSW 143
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
SETGDRY+LKLFRDYL HQ+ E G+PW+DM+HIV LNKLDAG EKI L+SRD ++VLV
Sbjct: 144 SETGDRYLLKLFRDYLFHQITETGKPWIDMAHIVTSLNKLDAGVNEKIQLVSRDGENVLV 203
Query: 295 VSYAELKQCLDQSFHELSSSASLTPKSTLPL 325
VSY +L++CL+ +F EL + P + LP+
Sbjct: 204 VSYTDLRRCLENAFSELQNRPPSIPNTLLPV 234
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 121/159 (76%)
Query: 329 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 388
S + ++ ++MPMIGAR+Y QL+ Q+ D LENELSKE+ENGRLFRLL KL TI ER
Sbjct: 76 STQRPHSINEVMPMIGARFYAQLETTQMKNDLLENELSKELENGRLFRLLCKLNTITERA 135
Query: 389 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 448
E +D +WSETGDRY+LKLFRDYL HQ+ E G+PW+DM+HIV LNKLDAG EKI L+S
Sbjct: 136 EFQMDVSWSETGDRYLLKLFRDYLFHQITETGKPWIDMAHIVTSLNKLDAGVNEKIQLVS 195
Query: 449 RDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPL 487
RD ++VLVVSY +L++CL+ +F EL + P + LP+
Sbjct: 196 RDGENVLVVSYTDLRRCLENAFSELQNRPPSIPNTLLPV 234
>gi|241616952|ref|XP_002408091.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3, putative
[Ixodes scapularis]
gi|215502928|gb|EEC12422.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3, putative
[Ixodes scapularis]
Length = 548
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 106/162 (65%), Positives = 138/162 (85%), Gaps = 1/162 (0%)
Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-R 172
H Q+DL +LGKL+LA+ C ++ A+QRENLQ S++L++R+YSADLRNLILYLLS +
Sbjct: 373 HYQQEDLVSLGKLVLALACNTMAAIQRENLQQSMELVSRNYSADLRNLILYLLSSPPRTH 432
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
++ D+MPMIGAR+YTQLDA Q+ D +ENEL+KE+ENGRLFR+L+KLGTI+ERPE +LD
Sbjct: 433 SINDIMPMIGARFYTQLDAAQMRSDVIENELAKEVENGRLFRMLIKLGTISERPEFHLDS 492
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKL 274
+WSETGDRYMLKLFRDYL HQV +D RPW+D++H+V LNK+
Sbjct: 493 SWSETGDRYMLKLFRDYLFHQVTKDSRPWIDVAHVVQALNKV 534
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 108/137 (78%), Gaps = 2/137 (1%)
Query: 301 KQCLDQSFHELSSSASLTPKSTLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGD 359
++ L QS +S + S ++ + LYLLS + ++ D+MPMIGAR+YTQLDA Q+ D
Sbjct: 399 RENLQQSMELVSRNYSADLRNLI-LYLLSSPPRTHSINDIMPMIGARFYTQLDAAQMRSD 457
Query: 360 SLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQED 419
+ENEL+KE+ENGRLFR+L+KLGTI+ERPE +LD +WSETGDRYMLKLFRDYL HQV +D
Sbjct: 458 VIENELAKEVENGRLFRMLIKLGTISERPEFHLDSSWSETGDRYMLKLFRDYLFHQVTKD 517
Query: 420 GRPWLDMSHIVHCLNKL 436
RPW+D++H+V LNK+
Sbjct: 518 SRPWIDVAHVVQALNKV 534
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 45/110 (40%), Gaps = 43/110 (39%)
Query: 10 ENFGGTTYFY---QAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKP 66
E+ GGTTYFY +A SS E G P Y ++PG P H
Sbjct: 129 ESLGGTTYFYHHDEANSSTEE----------------GQPVMVPEYQVYPGNPAH----- 167
Query: 67 PNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
+I H+ +LTL NPE P+LP EVD YH+L
Sbjct: 168 -------------------DILHRQSLTLGQRNPEANPDLPTEVDTYHNL 198
>gi|196005029|ref|XP_002112381.1| hypothetical protein TRIADDRAFT_24936 [Trichoplax adhaerens]
gi|190584422|gb|EDV24491.1| hypothetical protein TRIADDRAFT_24936 [Trichoplax adhaerens]
Length = 465
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 157/207 (75%), Gaps = 8/207 (3%)
Query: 119 DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS--------VHQ 170
DLT+LG+L+LA+ CRSL A+ EN S+D +A +YS+DLR+LI LL+ VH+
Sbjct: 253 DLTSLGRLLLALACRSLAALDPENYSQSLDFVANNYSSDLRDLIFGLLTCQQHMPQVVHK 312
Query: 171 KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
++V D+MP+IGAR+YT ++ + D LE EL E+EN RL RLL+KLG +N+RPE L
Sbjct: 313 IKSVNDVMPLIGARFYTHINDLYFENDILEVELENELENDRLVRLLLKLGIVNDRPEFFL 372
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSETGDRY+LKLFRDY+ HQV++DG PW+DM+H++ CLNKLD G+Q++ICL SRDE+
Sbjct: 373 DGDWSETGDRYLLKLFRDYIFHQVKQDGSPWIDMAHMIQCLNKLDVGSQDRICLSSRDEK 432
Query: 291 SVLVVSYAELKQCLDQSFHELSSSASL 317
SVLVVSY +L+ C +++ +E+ +A +
Sbjct: 433 SVLVVSYKDLRDCFERTINEVFVAAGI 459
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 119/150 (79%)
Query: 330 VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPE 389
VH+ ++V D+MP+IGAR+YT ++ + D LE EL E+EN RL RLL+KLG +N+RPE
Sbjct: 310 VHKIKSVNDVMPLIGARFYTHINDLYFENDILEVELENELENDRLVRLLLKLGIVNDRPE 369
Query: 390 LNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSR 449
LD WSETGDRY+LKLFRDY+ HQV++DG PW+DM+H++ CLNKLD G+Q++ICL SR
Sbjct: 370 FFLDGDWSETGDRYLLKLFRDYIFHQVKQDGSPWIDMAHMIQCLNKLDVGSQDRICLSSR 429
Query: 450 DEQSVLVVSYAELKQCLDQSFHELSSSASL 479
DE+SVLVVSY +L+ C +++ +E+ +A +
Sbjct: 430 DEKSVLVVSYKDLRDCFERTINEVFVAAGI 459
>gi|117306363|gb|AAI26641.1| PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
[Bos taurus]
gi|296481821|tpg|DAA23936.1| TPA: PAB-dependent poly(A)-specific ribonuclease subunit 3 [Bos
taurus]
Length = 469
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/159 (64%), Positives = 131/159 (82%), Gaps = 1/159 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 308 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 367
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 368 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 427
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKL 274
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNK+
Sbjct: 428 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKV 466
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/115 (67%), Positives = 95/115 (82%), Gaps = 1/115 (0%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 352 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 411
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKL 436
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNK+
Sbjct: 412 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKV 466
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 9 QENFGGTTYFYQ----APSSG----TEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPP 60
+E GGTTYFY AP SG A A G ++ P Y ++P T P
Sbjct: 73 KETVGGTTYFYTDTTPAPLSGMRSFKNYHRTACRAEGQ------IIEVFPNYHIYPPTAP 126
Query: 61 HVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
HV + P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 127 HVAYMQPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 177
>gi|320170118|gb|EFW47017.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Capsaspora
owczarzaki ATCC 30864]
Length = 974
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 153/206 (74%), Gaps = 3/206 (1%)
Query: 114 HDLQDDLTALGKLILAMTCRSL-MAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK- 171
H Q+DLT+LG+L+LA+ CRS+ + RE++ + + R+Y D+ + +LL V++
Sbjct: 766 HYQQEDLTSLGRLLLAVCCRSVSVLASRESISQGLTYVNRNYHQDVAQVFAHLLGVNRNP 825
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R+V +LMP+IG+R++T+L+ + + LENEL+KE+ENGRLFRL+ K+ INER L L
Sbjct: 826 IRSVSELMPLIGSRFFTELECSAMQHELLENELAKELENGRLFRLMAKMCFINERDGLLL 885
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D +WSETGDRY+LKLFRD++ HQ + G PW+D+SH+V LNKLDAG EKI L SRDEQ
Sbjct: 886 DTSWSETGDRYLLKLFRDFVFHQALDTGEPWIDLSHVVQSLNKLDAGFPEKIALSSRDEQ 945
Query: 291 SVLVVSYAELKQCLDQSFHELSSSAS 316
S+LVVSY +LK+CLD +F EL ++ S
Sbjct: 946 SMLVVSYKDLKRCLDTAFQELLAATS 971
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/155 (58%), Positives = 121/155 (78%), Gaps = 2/155 (1%)
Query: 326 YLLSVHQK--RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
+LL V++ R+V +LMP+IG+R++T+L+ + + LENEL+KE+ENGRLFRL+ K+
Sbjct: 817 HLLGVNRNPIRSVSELMPLIGSRFFTELECSAMQHELLENELAKELENGRLFRLMAKMCF 876
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
INER L LD +WSETGDRY+LKLFRD++ HQ + G PW+D+SH+V LNKLDAG EK
Sbjct: 877 INERDGLLLDTSWSETGDRYLLKLFRDFVFHQALDTGEPWIDLSHVVQSLNKLDAGFPEK 936
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
I L SRDEQS+LVVSY +LK+CLD +F EL ++ S
Sbjct: 937 IALSSRDEQSMLVVSYKDLKRCLDTAFQELLAATS 971
>gi|405973500|gb|EKC38208.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Crassostrea
gigas]
Length = 145
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/138 (75%), Positives = 119/138 (86%)
Query: 178 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSET 237
MPMIGAR+YTQLD+ QL D +ENEL+KE+ENGRLFRLL KLGTINERPE NLD WSET
Sbjct: 1 MPMIGARFYTQLDSAQLRSDVIENELTKEVENGRLFRLLAKLGTINERPEYNLDMQWSET 60
Query: 238 GDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 297
GDRYMLKLFRDYL HQV + G PW+DM+HIV CLNKLD+G+ E+ICL SRDEQSVLVVSY
Sbjct: 61 GDRYMLKLFRDYLFHQVDQTGAPWIDMAHIVQCLNKLDSGSPERICLTSRDEQSVLVVSY 120
Query: 298 AELKQCLDQSFHELSSSA 315
AELKQ +++F EL SS+
Sbjct: 121 AELKQNYERAFSELLSSS 138
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/138 (75%), Positives = 119/138 (86%)
Query: 340 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSET 399
MPMIGAR+YTQLD+ QL D +ENEL+KE+ENGRLFRLL KLGTINERPE NLD WSET
Sbjct: 1 MPMIGARFYTQLDSAQLRSDVIENELTKEVENGRLFRLLAKLGTINERPEYNLDMQWSET 60
Query: 400 GDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 459
GDRYMLKLFRDYL HQV + G PW+DM+HIV CLNKLD+G+ E+ICL SRDEQSVLVVSY
Sbjct: 61 GDRYMLKLFRDYLFHQVDQTGAPWIDMAHIVQCLNKLDSGSPERICLTSRDEQSVLVVSY 120
Query: 460 AELKQCLDQSFHELSSSA 477
AELKQ +++F EL SS+
Sbjct: 121 AELKQNYERAFSELLSSS 138
>gi|328870350|gb|EGG18725.1| hypothetical protein DFA_04221 [Dictyostelium fasciculatum]
Length = 667
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 140/198 (70%), Gaps = 4/198 (2%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKR----T 173
+DL G+L+L++ CRS +A NL SI+ ++ YS + +NL+++LLS Q T
Sbjct: 464 EDLVIFGRLLLSLACRSAVASTNNNLSKSIEFISSQYSKEFKNLVIFLLSKPQPNMPPPT 523
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ D++ MI R + + + D LE EL+KE+ENGRLFRL+VKLG INERP +LDP
Sbjct: 524 IDDIVSMIAPRLLQENTYLHSYTDELETELTKEIENGRLFRLMVKLGYINERPSFDLDPR 583
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETGDRY+LKLFRDY+ HQV +DG P LD H++ LNKLD+G EKI LMSRDEQS+L
Sbjct: 584 WSETGDRYLLKLFRDYVFHQVYDDGTPVLDFYHVIDALNKLDSGVNEKIMLMSRDEQSLL 643
Query: 294 VVSYAELKQCLDQSFHEL 311
VVSY +LK+C D +F EL
Sbjct: 644 VVSYKDLKRCTDGAFGEL 661
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 122/180 (67%), Gaps = 5/180 (2%)
Query: 298 AELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKR----TVVDLMPMIGARYYTQLDA 353
A L +S +SS S K+ L ++LLS Q T+ D++ MI R +
Sbjct: 483 ASTNNNLSKSIEFISSQYSKEFKN-LVIFLLSKPQPNMPPPTIDDIVSMIAPRLLQENTY 541
Query: 354 VQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLL 413
+ + D LE EL+KE+ENGRLFRL+VKLG INERP +LDP WSETGDRY+LKLFRDY+
Sbjct: 542 LHSYTDELETELTKEIENGRLFRLMVKLGYINERPSFDLDPRWSETGDRYLLKLFRDYVF 601
Query: 414 HQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
HQV +DG P LD H++ LNKLD+G EKI LMSRDEQS+LVVSY +LK+C D +F EL
Sbjct: 602 HQVYDDGTPVLDFYHVIDALNKLDSGVNEKIMLMSRDEQSLLVVSYKDLKRCTDGAFGEL 661
>gi|392563457|gb|EIW56636.1| hypothetical protein TRAVEDRAFT_21734 [Trametes versicolor
FP-101664 SS1]
Length = 518
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/195 (55%), Positives = 142/195 (72%), Gaps = 2/195 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
QDDLT LG LI+ + S+ ++ N+Q +++ + R+YSADL++++L+LLS RT+
Sbjct: 323 QDDLTMLGALIMQLCTGSMSSMH--NIQKAVESIGRNYSADLKSVVLFLLSKPAHRTIGQ 380
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
L MIG+R T+LD Q D LE EL E+EN RL RLL K G INERPE N + WSE
Sbjct: 381 LFDMIGSRLLTELDETQNAVDRLEGELMTELENARLVRLLCKFGFINERPEHNHETRWSE 440
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 296
TGDRY++KLFRDY+ HQV E GRP +DM+H++ CLNKLDAGT E+I L+SRDEQS LVVS
Sbjct: 441 TGDRYIVKLFRDYVFHQVDEVGRPVVDMTHVLACLNKLDAGTDERIMLVSRDEQSCLVVS 500
Query: 297 YAELKQCLDQSFHEL 311
Y E+K C++ +F EL
Sbjct: 501 YREVKACIESAFTEL 515
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 111/152 (73%)
Query: 322 TLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
++ L+LLS RT+ L MIG+R T+LD Q D LE EL E+EN RL RLL K
Sbjct: 364 SVVLFLLSKPAHRTIGQLFDMIGSRLLTELDETQNAVDRLEGELMTELENARLVRLLCKF 423
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
G INERPE N + WSETGDRY++KLFRDY+ HQV E GRP +DM+H++ CLNKLDAGT
Sbjct: 424 GFINERPEHNHETRWSETGDRYIVKLFRDYVFHQVDEVGRPVVDMTHVLACLNKLDAGTD 483
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
E+I L+SRDEQS LVVSY E+K C++ +F EL
Sbjct: 484 ERIMLVSRDEQSCLVVSYREVKACIESAFTEL 515
>gi|321263035|ref|XP_003196236.1| poly(A)-specific ribonuclease [Cryptococcus gattii WM276]
gi|317462711|gb|ADV24449.1| poly(A)-specific ribonuclease, putative [Cryptococcus gattii WM276]
Length = 684
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 146/203 (71%), Gaps = 5/203 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---RT 173
Q+DL + GKLI+++TC L +D ++R YS+DL NLILYL+S + ++
Sbjct: 478 QEDLLSFGKLIISLTCDFFQPTL--PLSLPLDHISRHYSSDLSNLILYLISKPAQGKVKS 535
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ +++ M+G R +LDAVQ + D LENEL E+ENGR+ RL+ KLG INER E LDP
Sbjct: 536 IDEVIKMMGPRILNELDAVQSYADVLENELGAEVENGRIVRLMTKLGFINERAEFELDPR 595
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WS+TGDRY+LKLFRDY+ H V DG+P LD+SH++ CLNKLDAG E++ L+SRD+QS L
Sbjct: 596 WSDTGDRYILKLFRDYVFHSVGVDGKPILDLSHVLVCLNKLDAGLDERVMLVSRDDQSCL 655
Query: 294 VVSYAELKQCLDQSFHELSSSAS 316
VVSY E+K C++ +F+EL ++ +
Sbjct: 656 VVSYREIKHCIEAAFNELKNAGN 678
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 120/161 (74%), Gaps = 3/161 (1%)
Query: 321 STLPLYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRL 377
S L LYL+S + +++ +++ M+G R +LDAVQ + D LENEL E+ENGR+ RL
Sbjct: 518 SNLILYLISKPAQGKVKSIDEVIKMMGPRILNELDAVQSYADVLENELGAEVENGRIVRL 577
Query: 378 LVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLD 437
+ KLG INER E LDP WS+TGDRY+LKLFRDY+ H V DG+P LD+SH++ CLNKLD
Sbjct: 578 MTKLGFINERAEFELDPRWSDTGDRYILKLFRDYVFHSVGVDGKPILDLSHVLVCLNKLD 637
Query: 438 AGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
AG E++ L+SRD+QS LVVSY E+K C++ +F+EL ++ +
Sbjct: 638 AGLDERVMLVSRDDQSCLVVSYREIKHCIEAAFNELKNAGN 678
>gi|58260258|ref|XP_567539.1| poly(A)-specific ribonuclease [Cryptococcus neoformans var.
neoformans JEC21]
gi|134116300|ref|XP_773104.1| hypothetical protein CNBJ0990 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819181|sp|P0CP51.1|PAN3_CRYNB RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|338819182|sp|P0CP50.1|PAN3_CRYNJ RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|50255725|gb|EAL18457.1| hypothetical protein CNBJ0990 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229589|gb|AAW46022.1| poly(A)-specific ribonuclease, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 684
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 147/203 (72%), Gaps = 5/203 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV---HQKRT 173
Q+DL + GKLI+++TC +L ++ ++R YS+DL NLILYL+S Q ++
Sbjct: 478 QEDLLSFGKLIISLTCDFFQPTLPFSL--PLEHISRHYSSDLSNLILYLISKPAQGQIKS 535
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ +++ M+G R +LDAVQ + D LENEL E+ENGR+ RLL KLG INER E LDP
Sbjct: 536 IDEVVKMMGPRILNELDAVQSYADVLENELGAEVENGRIVRLLTKLGFINERAEFELDPR 595
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WS+TGDRY+LKLFRDY+ H V DG+P LD+SH++ CLNKLDAG E++ L+SRD+QS L
Sbjct: 596 WSDTGDRYILKLFRDYVFHSVGVDGKPILDLSHVLVCLNKLDAGLDERVMLVSRDDQSCL 655
Query: 294 VVSYAELKQCLDQSFHELSSSAS 316
VVSY E+K C++ +F+EL ++ +
Sbjct: 656 VVSYREIKHCIEAAFNELKNAGN 678
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 120/161 (74%), Gaps = 3/161 (1%)
Query: 321 STLPLYLLSV---HQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRL 377
S L LYL+S Q +++ +++ M+G R +LDAVQ + D LENEL E+ENGR+ RL
Sbjct: 518 SNLILYLISKPAQGQIKSIDEVVKMMGPRILNELDAVQSYADVLENELGAEVENGRIVRL 577
Query: 378 LVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLD 437
L KLG INER E LDP WS+TGDRY+LKLFRDY+ H V DG+P LD+SH++ CLNKLD
Sbjct: 578 LTKLGFINERAEFELDPRWSDTGDRYILKLFRDYVFHSVGVDGKPILDLSHVLVCLNKLD 637
Query: 438 AGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
AG E++ L+SRD+QS LVVSY E+K C++ +F+EL ++ +
Sbjct: 638 AGLDERVMLVSRDDQSCLVVSYREIKHCIEAAFNELKNAGN 678
>gi|288559132|sp|P0CD65.1|PAN3_DICDI RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit 3
Length = 746
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 138/201 (68%), Gaps = 2/201 (0%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS--VHQKRTVV 175
+DL G+LIL + CRS + NL SI+ ++ YS +L NLI+YLL+ V +
Sbjct: 544 EDLLLFGRLILTLACRSAQSTTTTNLSKSIEYVSNQYSKELYNLIVYLLTKPVINLPNID 603
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
+++ MI R + + + + D LE ELSKE ENGRLFRL+ KLG INERP ++DP WS
Sbjct: 604 EVVLMISGRLLQENNYLHTYTDDLETELSKEYENGRLFRLVTKLGFINERPLYDMDPRWS 663
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY++KLFRDY+ HQV +DG P LD H+V LNKLD G EKI LMSRDEQS+LVV
Sbjct: 664 ETGDRYLIKLFRDYIFHQVYDDGTPVLDFYHVVETLNKLDCGVDEKILLMSRDEQSLLVV 723
Query: 296 SYAELKQCLDQSFHELSSSAS 316
SY +LK+C+D +F EL S S
Sbjct: 724 SYKDLKKCIDSAFSELVSQKS 744
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 112/159 (70%), Gaps = 2/159 (1%)
Query: 322 TLPLYLLS--VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV 379
L +YLL+ V + +++ MI R + + + + D LE ELSKE ENGRLFRL+
Sbjct: 586 NLIVYLLTKPVINLPNIDEVVLMISGRLLQENNYLHTYTDDLETELSKEYENGRLFRLVT 645
Query: 380 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
KLG INERP ++DP WSETGDRY++KLFRDY+ HQV +DG P LD H+V LNKLD G
Sbjct: 646 KLGFINERPLYDMDPRWSETGDRYLIKLFRDYIFHQVYDDGTPVLDFYHVVETLNKLDCG 705
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI LMSRDEQS+LVVSY +LK+C+D +F EL S S
Sbjct: 706 VDEKILLMSRDEQSLLVVSYKDLKKCIDSAFSELVSQKS 744
>gi|405122628|gb|AFR97394.1| poly(A)-specific ribonuclease [Cryptococcus neoformans var. grubii
H99]
Length = 681
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 146/203 (71%), Gaps = 5/203 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV---HQKRT 173
Q+DL + G+L++++TC L ++ ++R YS+DL NLILYL+S Q ++
Sbjct: 475 QEDLLSFGQLVISLTCDFFQPTL--PLSLPLEHISRHYSSDLSNLILYLISKPAQGQVKS 532
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ +++ M+G R +LDAVQ + D LENEL E+ENGR+ RLL KLG INER E LDP
Sbjct: 533 IDEVVKMMGPRILNELDAVQSYADVLENELGAEVENGRIVRLLTKLGFINERAEFELDPR 592
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WS+TGDRY+LKLFRDY+ H V DG+P LD+SH++ CLNKLDAG E++ L+SRD+QS L
Sbjct: 593 WSDTGDRYILKLFRDYVFHSVGVDGKPILDLSHVLVCLNKLDAGLDERVMLVSRDDQSCL 652
Query: 294 VVSYAELKQCLDQSFHELSSSAS 316
VVSY E+K C++ +F+EL ++ +
Sbjct: 653 VVSYREIKHCIEAAFNELKNAGN 675
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 120/161 (74%), Gaps = 3/161 (1%)
Query: 321 STLPLYLLSV---HQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRL 377
S L LYL+S Q +++ +++ M+G R +LDAVQ + D LENEL E+ENGR+ RL
Sbjct: 515 SNLILYLISKPAQGQVKSIDEVVKMMGPRILNELDAVQSYADVLENELGAEVENGRIVRL 574
Query: 378 LVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLD 437
L KLG INER E LDP WS+TGDRY+LKLFRDY+ H V DG+P LD+SH++ CLNKLD
Sbjct: 575 LTKLGFINERAEFELDPRWSDTGDRYILKLFRDYVFHSVGVDGKPILDLSHVLVCLNKLD 634
Query: 438 AGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
AG E++ L+SRD+QS LVVSY E+K C++ +F+EL ++ +
Sbjct: 635 AGLDERVMLVSRDDQSCLVVSYREIKHCIEAAFNELKNAGN 675
>gi|395327705|gb|EJF60102.1| hypothetical protein DICSQDRAFT_63666 [Dichomitus squalens LYAD-421
SS1]
Length = 498
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 143/204 (70%), Gaps = 4/204 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ-KRTVV 175
QDDLT G L+ + C +L A+ NLQ +ID + R YSADL+++ L+L+S + +
Sbjct: 277 QDDLTMFGALVFMLCCSNLAAMN--NLQKAIDHLGRYYSADLKSVALFLISKGGPHKNIG 334
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
L MIG+R T+LD Q D LENEL E+ENGRL RLL K G INERPE N + WS
Sbjct: 335 QLFDMIGSRLLTELDEAQNGVDRLENELMSELENGRLVRLLCKFGFINERPEHNHETRWS 394
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY++KLFRDY+ HQV E GRP ++++H++ CLNKLDAGT E+I L+SRDEQS LVV
Sbjct: 395 ETGDRYIVKLFRDYVFHQVDELGRPVVNLTHVLTCLNKLDAGTDERIMLVSRDEQSCLVV 454
Query: 296 SYAELKQCLDQSFHELS-SSASLT 318
SY E+K C++ +F S SSA L
Sbjct: 455 SYREVKACIESAFRFASLSSACLV 478
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Query: 322 TLPLYLLSVHQ-KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
++ L+L+S + + L MIG+R T+LD Q D LENEL E+ENGRL RLL K
Sbjct: 318 SVALFLISKGGPHKNIGQLFDMIGSRLLTELDEAQNGVDRLENELMSELENGRLVRLLCK 377
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
G INERPE N + WSETGDRY++KLFRDY+ HQV E GRP ++++H++ CLNKLDAGT
Sbjct: 378 FGFINERPEHNHETRWSETGDRYIVKLFRDYVFHQVDELGRPVVNLTHVLTCLNKLDAGT 437
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS-SSASLT 480
E+I L+SRDEQS LVVSY E+K C++ +F S SSA L
Sbjct: 438 DERIMLVSRDEQSCLVVSYREVKACIESAFRFASLSSACLV 478
>gi|358056066|dbj|GAA97963.1| hypothetical protein E5Q_04643 [Mixia osmundae IAM 14324]
Length = 581
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 140/197 (71%), Gaps = 3/197 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
Q+DL LGKLI+ + C SL AV NL S+D ++R YS D++NL+L+L + R +D
Sbjct: 386 QEDLFDLGKLIVTLGCTSLSAVH--NLPRSLDHLSRQYSNDIKNLVLFLFGKPEPRKNID 443
Query: 177 -LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
++ MIG R L+A Q D LE EL +E+EN RL RLL K G INERPE + DP WS
Sbjct: 444 EVLAMIGPRLLDDLNASQSENDLLETELMRELENARLVRLLCKFGFINERPEFDHDPRWS 503
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY++KLFRDY+ HQV+E G P +D+SH++ CLNKLDAG EK+ L+SRD QS L+V
Sbjct: 504 ETGDRYLIKLFRDYVFHQVEEHGHPVVDLSHVLTCLNKLDAGVDEKMTLVSRDGQSCLIV 563
Query: 296 SYAELKQCLDQSFHELS 312
SY +LKQ ++ +F +L+
Sbjct: 564 SYRDLKQAVNAAFRDLA 580
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 109/154 (70%), Gaps = 1/154 (0%)
Query: 322 TLPLYLLSVHQKRTVVD-LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L L+L + R +D ++ MIG R L+A Q D LE EL +E+EN RL RLL K
Sbjct: 427 NLVLFLFGKPEPRKNIDEVLAMIGPRLLDDLNASQSENDLLETELMRELENARLVRLLCK 486
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
G INERPE + DP WSETGDRY++KLFRDY+ HQV+E G P +D+SH++ CLNKLDAG
Sbjct: 487 FGFINERPEFDHDPRWSETGDRYLIKLFRDYVFHQVEEHGHPVVDLSHVLTCLNKLDAGV 546
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
EK+ L+SRD QS L+VSY +LKQ ++ +F +L+
Sbjct: 547 DEKMTLVSRDGQSCLIVSYRDLKQAVNAAFRDLA 580
>gi|393233518|gb|EJD41089.1| hypothetical protein AURDEDRAFT_115616 [Auricularia delicata
TFB-10046 SS5]
Length = 478
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 142/197 (72%), Gaps = 3/197 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q+DL GK+I + C ++ A NL +I+ + R YS DL+N+ L+L+S +TV
Sbjct: 281 QEDLVQFGKVIFQLACNNVAATN--NLPKAIEALTRHYSPDLKNVALFLISKPSPLKTVG 338
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
L MIG+R T++DA+Q + D LE++L E+ENGRL RLL K G INERPE ++DP WS
Sbjct: 339 QLFDMIGSRLLTEMDAMQDYADQLESDLMSELENGRLVRLLCKFGFINERPEFDMDPRWS 398
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETG+RY +KLFRDY+ HQV E G P L+++H++ CLNKLDAG++E+I L SR+EQ+ LV+
Sbjct: 399 ETGERYPIKLFRDYVFHQVDERGNPHLNLAHVITCLNKLDAGSEERIMLTSREEQNCLVI 458
Query: 296 SYAELKQCLDQSFHELS 312
+Y E+K CL+ +F ELS
Sbjct: 459 TYKEIKACLEAAFGELS 475
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 110/141 (78%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
+TV L MIG+R T++DA+Q + D LE++L E+ENGRL RLL K G INERPE ++D
Sbjct: 335 KTVGQLFDMIGSRLLTEMDAMQDYADQLESDLMSELENGRLVRLLCKFGFINERPEFDMD 394
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
P WSETG+RY +KLFRDY+ HQV E G P L+++H++ CLNKLDAG++E+I L SR+EQ+
Sbjct: 395 PRWSETGERYPIKLFRDYVFHQVDERGNPHLNLAHVITCLNKLDAGSEERIMLTSREEQN 454
Query: 454 VLVVSYAELKQCLDQSFHELS 474
LV++Y E+K CL+ +F ELS
Sbjct: 455 CLVITYKEIKACLEAAFGELS 475
>gi|389738931|gb|EIM80126.1| hypothetical protein STEHIDRAFT_105753 [Stereum hirsutum FP-91666
SS1]
Length = 667
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 139/197 (70%), Gaps = 3/197 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS-VHQKRTVV 175
Q+DL G+LI + C ++ AV NL S++ M++ YSAD++N+ L+ S V + V
Sbjct: 471 QEDLVMFGRLIFGLCCSNMAAVN--NLPKSLETMSKHYSADIKNVALFCFSKVGVHKHVG 528
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
+ MI + +LD +Q + LENEL+ E+EN RLFRLL K G INERPE DP WS
Sbjct: 529 QIFEMINPKLVHELDELQHGVEHLENELASELENARLFRLLCKFGFINERPEFARDPRWS 588
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY++KLFRDY+ HQV E G+P ++M+H++ CLNKLDAGT E+I L+SRDEQSVLVV
Sbjct: 589 ETGDRYIIKLFRDYVFHQVDEHGKPVVNMTHVLTCLNKLDAGTDERIMLVSRDEQSVLVV 648
Query: 296 SYAELKQCLDQSFHELS 312
SY E+K +D +F +L+
Sbjct: 649 SYKEIKTYVDAAFMDLA 665
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 114/171 (66%)
Query: 304 LDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLEN 363
L +S +S S K+ V + V + MI + +LD +Q + LEN
Sbjct: 495 LPKSLETMSKHYSADIKNVALFCFSKVGVHKHVGQIFEMINPKLVHELDELQHGVEHLEN 554
Query: 364 ELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPW 423
EL+ E+EN RLFRLL K G INERPE DP WSETGDRY++KLFRDY+ HQV E G+P
Sbjct: 555 ELASELENARLFRLLCKFGFINERPEFARDPRWSETGDRYIIKLFRDYVFHQVDEHGKPV 614
Query: 424 LDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
++M+H++ CLNKLDAGT E+I L+SRDEQSVLVVSY E+K +D +F +L+
Sbjct: 615 VNMTHVLTCLNKLDAGTDERIMLVSRDEQSVLVVSYKEIKTYVDAAFMDLA 665
>gi|308501963|ref|XP_003113166.1| hypothetical protein CRE_25543 [Caenorhabditis remanei]
gi|308265467|gb|EFP09420.1| hypothetical protein CRE_25543 [Caenorhabditis remanei]
Length = 642
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 140/194 (72%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDL 177
+DL G +++A+ A +++ Q S ++ ++S DLRN+I +L + +RT+ ++
Sbjct: 440 EDLNMFGNVVVALATGRANAWRKDLYQNSKKIIEDNFSIDLRNVIGFLHNNGSRRTINEI 499
Query: 178 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSET 237
MPMIG R++T ++ +Q D LE ELS+EMENGRLFRLL K+ T+ ER E +D WSET
Sbjct: 500 MPMIGGRFFTVMENMQAKSDVLEGELSREMENGRLFRLLSKMNTVLERVENGVDDGWSET 559
Query: 238 GDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 297
GDR+MLKLFRDY+ HQV + G+PWLD++HI+ CLNKLD G+ EKI ++SR+ + ++V Y
Sbjct: 560 GDRFMLKLFRDYVFHQVTDQGKPWLDLAHIIQCLNKLDCGSPEKIEMVSRNGDTQIIVDY 619
Query: 298 AELKQCLDQSFHEL 311
+ LK+CLD+SF EL
Sbjct: 620 STLKRCLDKSFREL 633
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 114/148 (77%)
Query: 326 YLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 385
+L + +RT+ ++MPMIG R++T ++ +Q D LE ELS+EMENGRLFRLL K+ T+
Sbjct: 486 FLHNNGSRRTINEIMPMIGGRFFTVMENMQAKSDVLEGELSREMENGRLFRLLSKMNTVL 545
Query: 386 ERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKIC 445
ER E +D WSETGDR+MLKLFRDY+ HQV + G+PWLD++HI+ CLNKLD G+ EKI
Sbjct: 546 ERVENGVDDGWSETGDRFMLKLFRDYVFHQVTDQGKPWLDLAHIIQCLNKLDCGSPEKIE 605
Query: 446 LMSRDEQSVLVVSYAELKQCLDQSFHEL 473
++SR+ + ++V Y+ LK+CLD+SF EL
Sbjct: 606 MVSRNGDTQIIVDYSTLKRCLDKSFREL 633
>gi|426193414|gb|EKV43347.1| hypothetical protein AGABI2DRAFT_210001 [Agaricus bisporus var.
bisporus H97]
Length = 632
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 143/205 (69%), Gaps = 3/205 (1%)
Query: 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS---VHQKR 172
LQ+DLT G+L+ +++C ++ A Q S+D M R Y DL+++ LYL+S VH+ +
Sbjct: 421 LQEDLTLFGRLVFSLSCGTIHAWTAPQFQKSLDWMTRWYQPDLKSVALYLISKPGVHKLK 480
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
T+ LM MI + +++ L D L+ +L E+EN RL RLL K G INERPE L+P
Sbjct: 481 TIDHLMEMIRPKVQAEMEEALLATDRLQQDLLSELENARLVRLLCKFGFINERPEFALEP 540
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
WSETGDRY++KLFRDY+ HQV E G P ++MSH++ CLNKLDAG++EK+ L+SRD+ S
Sbjct: 541 RWSETGDRYIIKLFRDYVFHQVDEHGNPIVNMSHVLTCLNKLDAGSEEKVMLVSRDDTSC 600
Query: 293 LVVSYAELKQCLDQSFHELSSSASL 317
LVVSY E+K C++ +F +L+ +++
Sbjct: 601 LVVSYKEIKACMEGAFSDLARPSTM 625
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 116/161 (72%), Gaps = 3/161 (1%)
Query: 322 TLPLYLLS---VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLL 378
++ LYL+S VH+ +T+ LM MI + +++ L D L+ +L E+EN RL RLL
Sbjct: 465 SVALYLISKPGVHKLKTIDHLMEMIRPKVQAEMEEALLATDRLQQDLLSELENARLVRLL 524
Query: 379 VKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDA 438
K G INERPE L+P WSETGDRY++KLFRDY+ HQV E G P ++MSH++ CLNKLDA
Sbjct: 525 CKFGFINERPEFALEPRWSETGDRYIIKLFRDYVFHQVDEHGNPIVNMSHVLTCLNKLDA 584
Query: 439 GTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASL 479
G++EK+ L+SRD+ S LVVSY E+K C++ +F +L+ +++
Sbjct: 585 GSEEKVMLVSRDDTSCLVVSYKEIKACMEGAFSDLARPSTM 625
>gi|336379223|gb|EGO20379.1| hypothetical protein SERLADRAFT_477907 [Serpula lacrymans var.
lacrymans S7.9]
Length = 339
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 141/198 (71%), Gaps = 4/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV-HQKRTVV 175
Q+DL G+L+ A+ C +L A+ L +++ + R YS+D++N+ LYL+S +T+
Sbjct: 140 QEDLVMFGRLLFALCCNNLAAMN--TLSKAVETLTRGYSSDIKNVALYLISKPGPHKTIS 197
Query: 176 DLMPMIGA-RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
L+ MIG R ++D VQ D LE+EL+ E+ENGRL RLL K G INERPE P W
Sbjct: 198 QLIDMIGKNRLMAEMDEVQGSADRLESELTSELENGRLVRLLCKFGFINERPEFPRQPRW 257
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
SETGDRY++KLFRDY+ HQV E+G P +++SH++ CLNKLD GT+E+I L+SRDEQS LV
Sbjct: 258 SETGDRYIIKLFRDYVFHQVDENGNPVVNLSHVLTCLNKLDCGTEERIMLVSRDEQSCLV 317
Query: 295 VSYAELKQCLDQSFHELS 312
VSY E+K C++ +F +L+
Sbjct: 318 VSYKEVKSCIEGAFSDLA 335
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 113/154 (73%), Gaps = 2/154 (1%)
Query: 323 LPLYLLSV-HQKRTVVDLMPMIGA-RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
+ LYL+S +T+ L+ MIG R ++D VQ D LE+EL+ E+ENGRL RLL K
Sbjct: 182 VALYLISKPGPHKTISQLIDMIGKNRLMAEMDEVQGSADRLESELTSELENGRLVRLLCK 241
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
G INERPE P WSETGDRY++KLFRDY+ HQV E+G P +++SH++ CLNKLD GT
Sbjct: 242 FGFINERPEFPRQPRWSETGDRYIIKLFRDYVFHQVDENGNPVVNLSHVLTCLNKLDCGT 301
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+E+I L+SRDEQS LVVSY E+K C++ +F +L+
Sbjct: 302 EERIMLVSRDEQSCLVVSYKEVKSCIEGAFSDLA 335
>gi|336366541|gb|EGN94888.1| hypothetical protein SERLA73DRAFT_171264 [Serpula lacrymans var.
lacrymans S7.3]
Length = 475
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 141/198 (71%), Gaps = 4/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV-HQKRTVV 175
Q+DL G+L+ A+ C +L A+ L +++ + R YS+D++N+ LYL+S +T+
Sbjct: 276 QEDLVMFGRLLFALCCNNLAAMN--TLSKAVETLTRGYSSDIKNVALYLISKPGPHKTIS 333
Query: 176 DLMPMIGA-RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
L+ MIG R ++D VQ D LE+EL+ E+ENGRL RLL K G INERPE P W
Sbjct: 334 QLIDMIGKNRLMAEMDEVQGSADRLESELTSELENGRLVRLLCKFGFINERPEFPRQPRW 393
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
SETGDRY++KLFRDY+ HQV E+G P +++SH++ CLNKLD GT+E+I L+SRDEQS LV
Sbjct: 394 SETGDRYIIKLFRDYVFHQVDENGNPVVNLSHVLTCLNKLDCGTEERIMLVSRDEQSCLV 453
Query: 295 VSYAELKQCLDQSFHELS 312
VSY E+K C++ +F +L+
Sbjct: 454 VSYKEVKSCIEGAFSDLA 471
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 112/152 (73%), Gaps = 2/152 (1%)
Query: 325 LYLLSV-HQKRTVVDLMPMIGA-RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG 382
LYL+S +T+ L+ MIG R ++D VQ D LE+EL+ E+ENGRL RLL K G
Sbjct: 320 LYLISKPGPHKTISQLIDMIGKNRLMAEMDEVQGSADRLESELTSELENGRLVRLLCKFG 379
Query: 383 TINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQE 442
INERPE P WSETGDRY++KLFRDY+ HQV E+G P +++SH++ CLNKLD GT+E
Sbjct: 380 FINERPEFPRQPRWSETGDRYIIKLFRDYVFHQVDENGNPVVNLSHVLTCLNKLDCGTEE 439
Query: 443 KICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+I L+SRDEQS LVVSY E+K C++ +F +L+
Sbjct: 440 RIMLVSRDEQSCLVVSYKEVKSCIEGAFSDLA 471
>gi|409076171|gb|EKM76544.1| hypothetical protein AGABI1DRAFT_102196 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 601
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 137/196 (69%), Gaps = 3/196 (1%)
Query: 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS---VHQKR 172
LQ+DLT G+L+ +++C ++ A Q S+D M R Y DL+++ LYL+S VH+ +
Sbjct: 405 LQEDLTLFGRLVFSLSCGTIHAWTAPQFQKSLDWMTRWYQPDLKSVALYLISKPGVHKLK 464
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
T+ LM MI + +++ L D L+ +L E+EN RL RLL K G INERPE L+P
Sbjct: 465 TIDHLMEMIRPKVQAEMEEALLATDRLQQDLLSELENARLVRLLCKFGFINERPEFALEP 524
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
WSETGDRY++KLFRDY+ HQV E G P ++MSH++ CLNKLDAG++EK+ L+SRD+ S
Sbjct: 525 RWSETGDRYIIKLFRDYVFHQVDEHGNPIVNMSHVLTCLNKLDAGSEEKVMLVSRDDTSC 584
Query: 293 LVVSYAELKQCLDQSF 308
LVVSY E+K C++ +F
Sbjct: 585 LVVSYKEIKACMEGAF 600
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 110/152 (72%), Gaps = 3/152 (1%)
Query: 322 TLPLYLLS---VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLL 378
++ LYL+S VH+ +T+ LM MI + +++ L D L+ +L E+EN RL RLL
Sbjct: 449 SVALYLISKPGVHKLKTIDHLMEMIRPKVQAEMEEALLATDRLQQDLLSELENARLVRLL 508
Query: 379 VKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDA 438
K G INERPE L+P WSETGDRY++KLFRDY+ HQV E G P ++MSH++ CLNKLDA
Sbjct: 509 CKFGFINERPEFALEPRWSETGDRYIIKLFRDYVFHQVDEHGNPIVNMSHVLTCLNKLDA 568
Query: 439 GTQEKICLMSRDEQSVLVVSYAELKQCLDQSF 470
G++EK+ L+SRD+ S LVVSY E+K C++ +F
Sbjct: 569 GSEEKVMLVSRDDTSCLVVSYKEIKACMEGAF 600
>gi|71997640|ref|NP_499177.3| Protein PANL-3 [Caenorhabditis elegans]
gi|68845696|sp|P34653.3|YOT7_CAEEL RecName: Full=Uncharacterized protein ZK632.7
gi|54110841|emb|CAA80184.3| Protein PANL-3 [Caenorhabditis elegans]
Length = 632
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 135/194 (69%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDL 177
+DL G LI+A+ +++ Q + +YS DLRN+I +L + ++T+ ++
Sbjct: 430 EDLNMFGNLIVALATGRANGWRKDLYQQLKKFIEDTYSMDLRNVIGFLHNNSTRKTINEI 489
Query: 178 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSET 237
MPMIG R++T ++ +Q D LE ELS+EMENGRLFRL+ K+ T+ ER E D WSET
Sbjct: 490 MPMIGGRFFTVMENMQAKTDVLEAELSREMENGRLFRLVAKMNTVLERVEHGTDDAWSET 549
Query: 238 GDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 297
GDR+MLKLFRDY+ HQV + G+ WLDM+HIV CLNKLD G+QEKI ++SR + +++ Y
Sbjct: 550 GDRFMLKLFRDYVFHQVTDQGKAWLDMAHIVQCLNKLDCGSQEKIEMVSRSGDTQIIIDY 609
Query: 298 AELKQCLDQSFHEL 311
A LK+CLD+SF +L
Sbjct: 610 ATLKRCLDKSFRDL 623
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 112/148 (75%)
Query: 326 YLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 385
+L + ++T+ ++MPMIG R++T ++ +Q D LE ELS+EMENGRLFRL+ K+ T+
Sbjct: 476 FLHNNSTRKTINEIMPMIGGRFFTVMENMQAKTDVLEAELSREMENGRLFRLVAKMNTVL 535
Query: 386 ERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKIC 445
ER E D WSETGDR+MLKLFRDY+ HQV + G+ WLDM+HIV CLNKLD G+QEKI
Sbjct: 536 ERVEHGTDDAWSETGDRFMLKLFRDYVFHQVTDQGKAWLDMAHIVQCLNKLDCGSQEKIE 595
Query: 446 LMSRDEQSVLVVSYAELKQCLDQSFHEL 473
++SR + +++ YA LK+CLD+SF +L
Sbjct: 596 MVSRSGDTQIIIDYATLKRCLDKSFRDL 623
>gi|322703622|gb|EFY95228.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Metarhizium anisopliae ARSEF 23]
Length = 661
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 136/202 (67%), Gaps = 4/202 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ---KRT 173
QDD G+ IL++ + A Q NL+ SI+LMARSYS +LR+ I++LL+ Q ++T
Sbjct: 455 QDDFMQFGRTILSLATNTPPA-QLTNLKASIELMARSYSVELRDTIIWLLTPAQPPSQKT 513
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + + I T LD Q D L +EL +E+ENGR+ RLL+KLG INER EL D
Sbjct: 514 IEEFIRGIAGHIVTTLDQSQHQSDDLNSELYRELENGRIARLLLKLGCINERQELEGDRA 573
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RYMLKLFRDY+ HQV G P LDM H++ CLN+LDAGT E+ICL SRDEQ+
Sbjct: 574 WSENGERYMLKLFRDYVFHQVDASGNPVLDMGHMLRCLNRLDAGTDERICLTSRDEQTSF 633
Query: 294 VVSYAELKQCLDQSFHELSSSA 315
+VSY ELK+ L +F EL ++
Sbjct: 634 IVSYKELKKQLGNAFGELQKTS 655
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 116/177 (65%), Gaps = 4/177 (2%)
Query: 304 LDQSFHELSSSASLTPKSTLPLYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDS 360
L S ++ S S+ + T+ ++LL+ Q ++T+ + + I T LD Q D
Sbjct: 480 LKASIELMARSYSVELRDTI-IWLLTPAQPPSQKTIEEFIRGIAGHIVTTLDQSQHQSDD 538
Query: 361 LENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDG 420
L +EL +E+ENGR+ RLL+KLG INER EL D WSE G+RYMLKLFRDY+ HQV G
Sbjct: 539 LNSELYRELENGRIARLLLKLGCINERQELEGDRAWSENGERYMLKLFRDYVFHQVDASG 598
Query: 421 RPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
P LDM H++ CLN+LDAGT E+ICL SRDEQ+ +VSY ELK+ L +F EL ++
Sbjct: 599 NPVLDMGHMLRCLNRLDAGTDERICLTSRDEQTSFIVSYKELKKQLGNAFGELQKTS 655
>gi|330842987|ref|XP_003293447.1| hypothetical protein DICPUDRAFT_42055 [Dictyostelium purpureum]
gi|325076215|gb|EGC30020.1| hypothetical protein DICPUDRAFT_42055 [Dictyostelium purpureum]
Length = 448
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 131/188 (69%), Gaps = 2/188 (1%)
Query: 131 TCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS--VHQKRTVVDLMPMIGARYYTQ 188
CRS ++ +NL SI+ ++ +YS DL NLI+YLL+ V + +++ MI R +
Sbjct: 258 ACRSAASITAQNLSNSIEYVSNTYSKDLYNLIVYLLTKPVINLPNIDEVVTMISGRLLQE 317
Query: 189 LDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRD 248
+ + + D LE EL KE ENGRLFRL+ KLG INERP ++DP WSETGDRY++KLFRD
Sbjct: 318 NNYLHTYTDDLETELGKEYENGRLFRLVTKLGFINERPLYDMDPRWSETGDRYLIKLFRD 377
Query: 249 YLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSF 308
Y+ HQV +DG P LD H+V LNKLD G EKI LMSRDEQS+LVVSY +LK+C++ +F
Sbjct: 378 YIFHQVYDDGTPVLDFYHVVETLNKLDCGVDEKILLMSRDEQSLLVVSYKDLKKCIELAF 437
Query: 309 HELSSSAS 316
EL S S
Sbjct: 438 SELVSQKS 445
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 111/159 (69%), Gaps = 2/159 (1%)
Query: 322 TLPLYLLS--VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV 379
L +YLL+ V + +++ MI R + + + + D LE EL KE ENGRLFRL+
Sbjct: 287 NLIVYLLTKPVINLPNIDEVVTMISGRLLQENNYLHTYTDDLETELGKEYENGRLFRLVT 346
Query: 380 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
KLG INERP ++DP WSETGDRY++KLFRDY+ HQV +DG P LD H+V LNKLD G
Sbjct: 347 KLGFINERPLYDMDPRWSETGDRYLIKLFRDYIFHQVYDDGTPVLDFYHVVETLNKLDCG 406
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI LMSRDEQS+LVVSY +LK+C++ +F EL S S
Sbjct: 407 VDEKILLMSRDEQSLLVVSYKDLKKCIELAFSELVSQKS 445
>gi|297693764|ref|XP_002824173.1| PREDICTED: LOW QUALITY PROTEIN: PAB-dependent poly(A)-specific
ribonuclease subunit 3 [Pongo abelii]
Length = 887
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 148/203 (72%), Gaps = 5/203 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743
Query: 176 DLMPMIGARYYT-QLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
D+MP + + + D +E +L+KE++NGRLFRLL KLGTINER + P W
Sbjct: 744 DIMPHDWCSIFILNWMLLTMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERVFRRI-PLW 802
Query: 235 SETGDRYMLKLFRDYLLHQVQED-GRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
SETGDRY+LKLFRD+L +V E P +D+SHI+ CLN+ DAG EKI L+SRDE+SVL
Sbjct: 803 SETGDRYLLKLFRDHLFSRVTESRCSPGIDLSHIISCLNQ-DAGVPEKISLISRDEKSVL 861
Query: 294 VVSYAELKQCLDQSFHELSSSAS 316
VV+Y++LK+C + +F EL ++A+
Sbjct: 862 VVTYSDLKRCFENTFQELIAAAN 884
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 112/159 (70%), Gaps = 5/159 (3%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYT-QLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L LYLL+ + R+V D+MP + + + D +E +L+KE++NGRLFRLL K
Sbjct: 728 LILYLLTDQNRMRSVNDIMPHDWCSIFILNWMLLTMRNDVIEEDLAKEVQNGRLFRLLAK 787
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQED-GRPWLDMSHIVHCLNKLDAG 439
LGTINER + P WSETGDRY+LKLFRD+L +V E P +D+SHI+ CLN+ DAG
Sbjct: 788 LGTINERVFRRI-PLWSETGDRYLLKLFRDHLFSRVTESRCSPGIDLSHIISCLNQ-DAG 845
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 846 VPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 884
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 395 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 437
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 438 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH 480
>gi|449544108|gb|EMD35082.1| hypothetical protein CERSUDRAFT_116581 [Ceriporiopsis subvermispora
B]
Length = 466
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 136/197 (69%), Gaps = 3/197 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ-KRTVV 175
Q+DL G+L++ + C + + N +++L AR YSADL+ + ++L+ + ++ +
Sbjct: 270 QEDLVMFGQLLMQLACGATSVIH--NPPKAMELFARFYSADLQKVTMFLIGTPEPRKNIG 327
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
+ M+G+R ++D +Q D LE EL E+ENGRL RLL K G INERPE + WS
Sbjct: 328 QVFDMVGSRLLAEMDEMQTAADRLEGELMSELENGRLVRLLCKFGFINERPEFARESRWS 387
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY++KLFRDY+ HQV E G P ++++H++ CLNKLDAGT E+I L+SRDEQS LVV
Sbjct: 388 ETGDRYIIKLFRDYVFHQVDEQGNPVVNLTHVLTCLNKLDAGTDERIMLISRDEQSCLVV 447
Query: 296 SYAELKQCLDQSFHELS 312
SY E+K C++ +F ELS
Sbjct: 448 SYKEIKACIESAFSELS 464
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 104/142 (73%)
Query: 333 KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 392
++ + + M+G+R ++D +Q D LE EL E+ENGRL RLL K G INERPE
Sbjct: 323 RKNIGQVFDMVGSRLLAEMDEMQTAADRLEGELMSELENGRLVRLLCKFGFINERPEFAR 382
Query: 393 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 452
+ WSETGDRY++KLFRDY+ HQV E G P ++++H++ CLNKLDAGT E+I L+SRDEQ
Sbjct: 383 ESRWSETGDRYIIKLFRDYVFHQVDEQGNPVVNLTHVLTCLNKLDAGTDERIMLISRDEQ 442
Query: 453 SVLVVSYAELKQCLDQSFHELS 474
S LVVSY E+K C++ +F ELS
Sbjct: 443 SCLVVSYKEIKACIESAFSELS 464
>gi|409043232|gb|EKM52715.1| hypothetical protein PHACADRAFT_261316 [Phanerochaete carnosa
HHB-10118-sp]
Length = 626
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 142/201 (70%), Gaps = 11/201 (5%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS----VHQKR 172
Q+DL G+LIL++ C +L AV NLQ S++ + R+Y ++RN+I+YL+ + R
Sbjct: 430 QEDLVMFGRLILSLCCNNLGAVN--NLQKSLENVGRNYPQEIRNIIVYLMQKPSPLKTIR 487
Query: 173 TVVDLM-PMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 231
V D+M P + + L+AV D LE++L E+ENGR+ RLL K G I+ERPE D
Sbjct: 488 QVFDMMKPQMLQEFDESLNAV----DQLESDLMSELENGRIVRLLCKFGFIDERPEFARD 543
Query: 232 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 291
P WSETGDRY++KLFRDY+ HQV ++G+P +++SH++ CLNKLDAG E+I L+SRDEQS
Sbjct: 544 PRWSETGDRYIVKLFRDYVFHQVDQNGQPVVNISHVLTCLNKLDAGVDERIMLVSRDEQS 603
Query: 292 VLVVSYAELKQCLDQSFHELS 312
LVVSY E+K C++ +F ELS
Sbjct: 604 CLVVSYREIKLCMESAFSELS 624
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 105/142 (73%), Gaps = 5/142 (3%)
Query: 334 RTVVDLM-PMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 392
R V D+M P + + L+AV D LE++L E+ENGR+ RLL K G I+ERPE
Sbjct: 487 RQVFDMMKPQMLQEFDESLNAV----DQLESDLMSELENGRIVRLLCKFGFIDERPEFAR 542
Query: 393 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 452
DP WSETGDRY++KLFRDY+ HQV ++G+P +++SH++ CLNKLDAG E+I L+SRDEQ
Sbjct: 543 DPRWSETGDRYIVKLFRDYVFHQVDQNGQPVVNISHVLTCLNKLDAGVDERIMLVSRDEQ 602
Query: 453 SVLVVSYAELKQCLDQSFHELS 474
S LVVSY E+K C++ +F ELS
Sbjct: 603 SCLVVSYREIKLCMESAFSELS 624
>gi|170097021|ref|XP_001879730.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645133|gb|EDR09381.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 410
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 133/193 (68%), Gaps = 1/193 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ-KRTVV 175
Q+DLT G+L+ A+ C ++ A + Q S++L+ R YSAD++N+ L+L+S R V
Sbjct: 217 QEDLTMFGRLVFALCCNNVSAATSAHFQKSLELIGRLYSADVKNVALFLISKGGPHRNVD 276
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
L+ MI + + + D LE+EL E+EN RL RLL K G INERPE +P W+
Sbjct: 277 QLLDMIRGKVMQEQEEALNATDRLEHELQSELENARLVRLLCKFGFINERPEFAREPRWA 336
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY++KLFRDY+ HQ+ E G P L+MSH++ CLNKLDAGT E+I L++RDEQ+ LVV
Sbjct: 337 ETGDRYIIKLFRDYVFHQMDEQGNPVLNMSHVLTCLNKLDAGTDERIMLVARDEQNCLVV 396
Query: 296 SYAELKQCLDQSF 308
SY E+K C+D +F
Sbjct: 397 SYKEIKACIDGAF 409
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 97/137 (70%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
R V L+ MI + + + D LE+EL E+EN RL RLL K G INERPE +
Sbjct: 273 RNVDQLLDMIRGKVMQEQEEALNATDRLEHELQSELENARLVRLLCKFGFINERPEFARE 332
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
P W+ETGDRY++KLFRDY+ HQ+ E G P L+MSH++ CLNKLDAGT E+I L++RDEQ+
Sbjct: 333 PRWAETGDRYIIKLFRDYVFHQMDEQGNPVLNMSHVLTCLNKLDAGTDERIMLVARDEQN 392
Query: 454 VLVVSYAELKQCLDQSF 470
LVVSY E+K C+D +F
Sbjct: 393 CLVVSYKEIKACIDGAF 409
>gi|341877835|gb|EGT33770.1| hypothetical protein CAEBREN_06531 [Caenorhabditis brenneri]
Length = 592
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 134/197 (68%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDL 177
+DL G +I+A+ +++ Q S + +S DLRN+I +L + ++T+ ++
Sbjct: 391 EDLNMFGNVIVALATGRANGYRKDLYQNSKKFIEEHFSIDLRNVIGFLHNNGTRKTINEV 450
Query: 178 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSET 237
MPMIG R++T ++ +Q D E EL++EMENGRLFRL+ K+ T+ ER E D W+ET
Sbjct: 451 MPMIGGRFFTVMENMQAKCDVYEAELTREMENGRLFRLVAKMNTVLERVEHGSDEGWAET 510
Query: 238 GDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 297
GDR+MLKLFRDY+ HQV + G+ WLDM+HIV CLNKLD G+ EKI ++SR + +++ Y
Sbjct: 511 GDRFMLKLFRDYVFHQVTDQGKAWLDMAHIVQCLNKLDCGSPEKIEMVSRSGDTQIIIDY 570
Query: 298 AELKQCLDQSFHELSSS 314
A LK+CLD+SF EL S
Sbjct: 571 ATLKRCLDKSFRELLGS 587
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/144 (54%), Positives = 108/144 (75%)
Query: 333 KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 392
++T+ ++MPMIG R++T ++ +Q D E EL++EMENGRLFRL+ K+ T+ ER E
Sbjct: 444 RKTINEVMPMIGGRFFTVMENMQAKCDVYEAELTREMENGRLFRLVAKMNTVLERVEHGS 503
Query: 393 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 452
D W+ETGDR+MLKLFRDY+ HQV + G+ WLDM+HIV CLNKLD G+ EKI ++SR
Sbjct: 504 DEGWAETGDRFMLKLFRDYVFHQVTDQGKAWLDMAHIVQCLNKLDCGSPEKIEMVSRSGD 563
Query: 453 SVLVVSYAELKQCLDQSFHELSSS 476
+ +++ YA LK+CLD+SF EL S
Sbjct: 564 TQIIIDYATLKRCLDKSFRELLGS 587
>gi|392587439|gb|EIW76773.1| hypothetical protein CONPUDRAFT_110415 [Coniophora puteana
RWD-64-598 SS2]
Length = 612
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 139/198 (70%), Gaps = 4/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV-HQKRTVV 175
Q+D G+LI A+ C + A+ +L +++ ++R YS D++++ LYL+S + +
Sbjct: 415 QEDFIMFGRLIFALCCGTTTAIS--SLAKAVEALSRYYSNDIKSIALYLVSKPGNPKNIA 472
Query: 176 DLMPMIG-ARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
++ ++G R ++D + D +E +L E+ENGRLFRL+ KLG INERPE +P W
Sbjct: 473 QVLDLVGRPRLVREMDELHTAVDRVEGDLMSELENGRLFRLMCKLGFINERPEFAREPRW 532
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
SETGDRY++KLFRDY+ HQV E+G P L+MSH++ CLNKLD G +E+I L+SRDEQS LV
Sbjct: 533 SETGDRYIIKLFRDYVFHQVDENGNPVLNMSHVLSCLNKLDIGVEERIMLVSRDEQSCLV 592
Query: 295 VSYAELKQCLDQSFHELS 312
VSY E+K C+D +F++L+
Sbjct: 593 VSYKEVKACVDSTFNDLA 610
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Query: 322 TLPLYLLSV-HQKRTVVDLMPMIG-ARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV 379
++ LYL+S + + ++ ++G R ++D + D +E +L E+ENGRLFRL+
Sbjct: 456 SIALYLVSKPGNPKNIAQVLDLVGRPRLVREMDELHTAVDRVEGDLMSELENGRLFRLMC 515
Query: 380 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
KLG INERPE +P WSETGDRY++KLFRDY+ HQV E+G P L+MSH++ CLNKLD G
Sbjct: 516 KLGFINERPEFAREPRWSETGDRYIIKLFRDYVFHQVDENGNPVLNMSHVLSCLNKLDIG 575
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+E+I L+SRDEQS LVVSY E+K C+D +F++L+
Sbjct: 576 VEERIMLVSRDEQSCLVVSYKEVKACVDSTFNDLA 610
>gi|169854950|ref|XP_001834146.1| hypothetical protein CC1G_09103 [Coprinopsis cinerea okayama7#130]
gi|116504747|gb|EAU87642.1| hypothetical protein CC1G_09103 [Coprinopsis cinerea okayama7#130]
Length = 677
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 132/195 (67%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
Q+DLT G+LI A+ C S A + Q S+D + R Y ++++L L+L+S +++
Sbjct: 469 QEDLTQFGRLIFALCCGSTNASSGPHFQKSVDHLLRVYGQEIKSLALWLISKQTMKSIDQ 528
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
++ I R + + L D LE EL E+EN RL RL+ KLG INERPE +P WSE
Sbjct: 529 VLDSIRHRVLLEQEEALLAVDRLEVELQSELENARLVRLMTKLGFINERPEFAREPRWSE 588
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 296
TGDRY++KLFRDY+ HQV E G P LDMSH++ CLNKLDAGT EK+ L++RDEQS LVVS
Sbjct: 589 TGDRYIIKLFRDYVFHQVDEHGNPVLDMSHVLTCLNKLDAGTDEKLMLVARDEQSCLVVS 648
Query: 297 YAELKQCLDQSFHEL 311
Y E+K C++ +F +L
Sbjct: 649 YKEVKNCIEGAFGDL 663
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 107/152 (70%)
Query: 322 TLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
+L L+L+S +++ ++ I R + + L D LE EL E+EN RL RL+ KL
Sbjct: 512 SLALWLISKQTMKSIDQVLDSIRHRVLLEQEEALLAVDRLEVELQSELENARLVRLMTKL 571
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
G INERPE +P WSETGDRY++KLFRDY+ HQV E G P LDMSH++ CLNKLDAGT
Sbjct: 572 GFINERPEFAREPRWSETGDRYIIKLFRDYVFHQVDEHGNPVLDMSHVLTCLNKLDAGTD 631
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
EK+ L++RDEQS LVVSY E+K C++ +F +L
Sbjct: 632 EKLMLVARDEQSCLVVSYKEVKNCIEGAFGDL 663
>gi|430812262|emb|CCJ30290.1| unnamed protein product [Pneumocystis jirovecii]
Length = 627
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 138/197 (70%), Gaps = 3/197 (1%)
Query: 119 DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLM 178
D T LG+LIL + C SL A+ EN++ S D + + YS + ++++ YL ++ +++ L+
Sbjct: 429 DFTLLGQLILILACNSLTAI--ENIKESFDYVIKHYSKNFQDVVFYLFK-NELKSIDKLV 485
Query: 179 PMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETG 238
++ + ++ + D+LE+EL +E+ENGRL RLL K G INERPE + D WSETG
Sbjct: 486 VLVSSHIIDSFNSSLCYNDTLESELCRELENGRLVRLLCKFGFINERPEFDHDELWSETG 545
Query: 239 DRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYA 298
DRY++KL RDY+ HQV E+G P +DM+H++ CLNKLDAG EKI L+SRDEQ+ L+VSY
Sbjct: 546 DRYLIKLLRDYVFHQVDENGNPVVDMAHVITCLNKLDAGVDEKIMLVSRDEQNCLIVSYK 605
Query: 299 ELKQCLDQSFHELSSSA 315
ELK C+ +F +L+ ++
Sbjct: 606 ELKNCIQSAFLDLTKNS 622
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 110/153 (71%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
++ L ++ +++ L+ ++ + ++ + D+LE+EL +E+ENGRL RLL K G I
Sbjct: 470 VFYLFKNELKSIDKLVVLVSSHIIDSFNSSLCYNDTLESELCRELENGRLVRLLCKFGFI 529
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERPE + D WSETGDRY++KL RDY+ HQV E+G P +DM+H++ CLNKLDAG EKI
Sbjct: 530 NERPEFDHDELWSETGDRYLIKLLRDYVFHQVDENGNPVVDMAHVITCLNKLDAGVDEKI 589
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
L+SRDEQ+ L+VSY ELK C+ +F +L+ ++
Sbjct: 590 MLVSRDEQNCLIVSYKELKNCIQSAFLDLTKNS 622
>gi|322694160|gb|EFY85997.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Metarhizium acridum CQMa 102]
Length = 659
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 134/202 (66%), Gaps = 4/202 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ---KRT 173
QDD G+ IL++ + A Q NL+ SI+ MARSYS +LR+ I++LL+ Q ++T
Sbjct: 453 QDDFMQFGRTILSLATNTPPA-QLTNLKASIESMARSYSVELRDTIIWLLTPAQPPLQKT 511
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + + I T LD Q D L +EL +E+ENGR+ RLL+KLG INER EL D
Sbjct: 512 IEEFIRGIAGHIVTTLDQSQHQSDYLNSELYRELENGRIARLLLKLGCINERQELEGDRA 571
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RYMLKLFRDY+ HQV G P LDM H++ CLN+LDAGT E ICL SRDEQ+
Sbjct: 572 WSENGERYMLKLFRDYVFHQVDGSGNPVLDMGHMLRCLNRLDAGTDESICLTSRDEQTSF 631
Query: 294 VVSYAELKQCLDQSFHELSSSA 315
+VSY ELK+ L +F EL ++
Sbjct: 632 IVSYRELKKQLGNAFGELQKTS 653
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 115/177 (64%), Gaps = 4/177 (2%)
Query: 304 LDQSFHELSSSASLTPKSTLPLYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDS 360
L S ++ S S+ + T+ ++LL+ Q ++T+ + + I T LD Q D
Sbjct: 478 LKASIESMARSYSVELRDTI-IWLLTPAQPPLQKTIEEFIRGIAGHIVTTLDQSQHQSDY 536
Query: 361 LENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDG 420
L +EL +E+ENGR+ RLL+KLG INER EL D WSE G+RYMLKLFRDY+ HQV G
Sbjct: 537 LNSELYRELENGRIARLLLKLGCINERQELEGDRAWSENGERYMLKLFRDYVFHQVDGSG 596
Query: 421 RPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
P LDM H++ CLN+LDAGT E ICL SRDEQ+ +VSY ELK+ L +F EL ++
Sbjct: 597 NPVLDMGHMLRCLNRLDAGTDESICLTSRDEQTSFIVSYRELKKQLGNAFGELQKTS 653
>gi|268573362|ref|XP_002641658.1| Hypothetical protein CBG09986 [Caenorhabditis briggsae]
Length = 660
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 135/194 (69%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDL 177
+DL G +I+++ A +++ S L+ ++S DLRN+I +L + ++T+ ++
Sbjct: 439 EDLNMFGNIIVSLATGRANAWRKDLYPQSKKLIDENFSIDLRNVIGFLHNNGSRKTINEI 498
Query: 178 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSET 237
MPMIG R++T ++ +Q D LE ELS+EMENGRL RLL K+ T+ ER E + WSET
Sbjct: 499 MPMIGGRFFTVMENMQAKTDVLEGELSREMENGRLLRLLAKMNTVLERVENGTEEGWSET 558
Query: 238 GDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 297
GDR+MLKLFRDY+ HQV + GR WLDM+HIV CLNKLD GT EKI +++R + +++ Y
Sbjct: 559 GDRFMLKLFRDYVFHQVTDQGRAWLDMAHIVQCLNKLDCGTLEKIEMVARGGDTQIIIDY 618
Query: 298 AELKQCLDQSFHEL 311
A LK+CL++S+ EL
Sbjct: 619 ATLKKCLEKSYREL 632
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 124/177 (70%), Gaps = 8/177 (4%)
Query: 297 YAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQL 356
Y + K+ +D++F S+ ++ + +L + ++T+ ++MPMIG R++T ++ +Q
Sbjct: 464 YPQSKKLIDENF-------SIDLRNVIG-FLHNNGSRKTINEIMPMIGGRFFTVMENMQA 515
Query: 357 HGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQV 416
D LE ELS+EMENGRL RLL K+ T+ ER E + WSETGDR+MLKLFRDY+ HQV
Sbjct: 516 KTDVLEGELSREMENGRLLRLLAKMNTVLERVENGTEEGWSETGDRFMLKLFRDYVFHQV 575
Query: 417 QEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
+ GR WLDM+HIV CLNKLD GT EKI +++R + +++ YA LK+CL++S+ EL
Sbjct: 576 TDQGRAWLDMAHIVQCLNKLDCGTLEKIEMVARGGDTQIIIDYATLKKCLEKSYREL 632
>gi|328768884|gb|EGF78929.1| hypothetical protein BATDEDRAFT_17258 [Batrachochytrium
dendrobatidis JAM81]
Length = 664
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL-SVHQKRTVV 175
Q+DL GKLI+++ SL A+Q N+Q +D + + +S DL +++YLL + +++
Sbjct: 463 QEDLRNFGKLIVSLAVGSLPALQ--NIQKCLDHIRKHFSPDLTTVVMYLLGNTPAIKSID 520
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
++ +I +R ++D+ + D LE++LS+E+EN RL RL+ KLG INERPE +LDPTW+
Sbjct: 521 GILQLIASRLLDEMDSAFRYNDRLEDDLSRELENARLVRLMSKLGFINERPEYDLDPTWA 580
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGD Y+LKLFRDY+ HQV ++G P LD+ H++ LNKLD G EKI L SRDE+S LV
Sbjct: 581 ETGDVYLLKLFRDYIFHQVDQNGAPLLDLGHVIQTLNKLDVGVDEKIMLTSRDEKSCLVA 640
Query: 296 SYAELKQCLDQSFHEL 311
SY +LKQC+D +F E+
Sbjct: 641 SYRDLKQCIDTTFREM 656
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 120/175 (68%), Gaps = 6/175 (3%)
Query: 300 LKQCLDQSFHELSSSASLTPKSTLPLYLL-SVHQKRTVVDLMPMIGARYYTQLDAVQLHG 358
+++CLD S + T+ +YLL + +++ ++ +I +R ++D+ +
Sbjct: 487 IQKCLDHIRKHFSPDLT-----TVVMYLLGNTPAIKSIDGILQLIASRLLDEMDSAFRYN 541
Query: 359 DSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQE 418
D LE++LS+E+EN RL RL+ KLG INERPE +LDPTW+ETGD Y+LKLFRDY+ HQV +
Sbjct: 542 DRLEDDLSRELENARLVRLMSKLGFINERPEYDLDPTWAETGDVYLLKLFRDYIFHQVDQ 601
Query: 419 DGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
+G P LD+ H++ LNKLD G EKI L SRDE+S LV SY +LKQC+D +F E+
Sbjct: 602 NGAPLLDLGHVIQTLNKLDVGVDEKIMLTSRDEKSCLVASYRDLKQCIDTTFREM 656
>gi|302677320|ref|XP_003028343.1| hypothetical protein SCHCODRAFT_17317 [Schizophyllum commune H4-8]
gi|300102031|gb|EFI93440.1| hypothetical protein SCHCODRAFT_17317 [Schizophyllum commune H4-8]
Length = 389
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 130/193 (67%), Gaps = 1/193 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ-KRTVV 175
Q+DL G+L+ A+ + N S++LM R+YSAD++N+ LYL+S RT+
Sbjct: 196 QEDLHMFGRLVFALCTLNPSGASSGNFSKSLELMGRNYSADMKNVALYLISKSGPHRTIG 255
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
L +I ++ ++D + D+LE+EL E+EN RL RL+ G I ERPE DP WS
Sbjct: 256 QLFDIINSKVVAEMDDALIATDTLEHELRGELENARLVRLMAMFGFITERPEFARDPRWS 315
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY++KLFRDY+ HQV E G P + MSH++ C+NKLDAG E++ L++RDEQS LVV
Sbjct: 316 ETGDRYIIKLFRDYVFHQVDEHGNPVISMSHVLTCMNKLDAGADERVMLVARDEQSCLVV 375
Query: 296 SYAELKQCLDQSF 308
+Y E+KQC++ +F
Sbjct: 376 TYKEIKQCMESAF 388
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
Query: 323 LPLYLLSVHQ-KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
+ LYL+S RT+ L +I ++ ++D + D+LE+EL E+EN RL RL+
Sbjct: 240 VALYLISKSGPHRTIGQLFDIINSKVVAEMDDALIATDTLEHELRGELENARLVRLMAMF 299
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
G I ERPE DP WSETGDRY++KLFRDY+ HQV E G P + MSH++ C+NKLDAG
Sbjct: 300 GFITERPEFARDPRWSETGDRYIIKLFRDYVFHQVDEHGNPVISMSHVLTCMNKLDAGAD 359
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSF 470
E++ L++RDEQS LVV+Y E+KQC++ +F
Sbjct: 360 ERVMLVARDEQSCLVVTYKEIKQCMESAF 388
>gi|402220190|gb|EJU00262.1| hypothetical protein DACRYDRAFT_23226 [Dacryopinax sp. DJM-731 SS1]
Length = 658
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 136/201 (67%), Gaps = 4/201 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS-VHQKRTVV 175
Q+D GKL+L + C S A NL S+D++++ YS DL LILYL+S + +
Sbjct: 459 QNDYMNFGKLLLELACNSTAAAT--NLPKSMDMVSKRYSPDLTKLILYLISPAGPPKNLD 516
Query: 176 DLMPMIGAR-YYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
L IG+R +LD V + DSLE EL E+EN R+ RL+ KLG INERPE + DP W
Sbjct: 517 KLFEYIGSRRVLEELDTVSNYSDSLEGELMSELENARVVRLMSKLGFINERPEFDHDPRW 576
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
SETGDRY++KLFRDY+ HQV G P +++SH++ CLNKLDAG E++ L+SRDEQS LV
Sbjct: 577 SETGDRYIIKLFRDYVFHQVDIHGNPVVNLSHVLVCLNKLDAGVDERVMLVSRDEQSCLV 636
Query: 295 VSYAELKQCLDQSFHELSSSA 315
VSY ++K ++ +F +LS ++
Sbjct: 637 VSYKDIKSAIETAFSDLSRAS 657
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 111/159 (69%), Gaps = 2/159 (1%)
Query: 321 STLPLYLLS-VHQKRTVVDLMPMIGAR-YYTQLDAVQLHGDSLENELSKEMENGRLFRLL 378
+ L LYL+S + + L IG+R +LD V + DSLE EL E+EN R+ RL+
Sbjct: 499 TKLILYLISPAGPPKNLDKLFEYIGSRRVLEELDTVSNYSDSLEGELMSELENARVVRLM 558
Query: 379 VKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDA 438
KLG INERPE + DP WSETGDRY++KLFRDY+ HQV G P +++SH++ CLNKLDA
Sbjct: 559 SKLGFINERPEFDHDPRWSETGDRYIIKLFRDYVFHQVDIHGNPVVNLSHVLVCLNKLDA 618
Query: 439 GTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
G E++ L+SRDEQS LVVSY ++K ++ +F +LS ++
Sbjct: 619 GVDERVMLVSRDEQSCLVVSYKDIKSAIETAFSDLSRAS 657
>gi|400600901|gb|EJP68569.1| Zinc finger CCCH type domain containing protein [Beauveria bassiana
ARSEF 2860]
Length = 641
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 133/201 (66%), Gaps = 4/201 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ---KRT 173
QDD G+ IL + +L V N+ S++ M+R+YSA+LR+ I++L + Q ++T
Sbjct: 436 QDDFVQFGRSILCLATGTL-PVHLNNITASLEQMSRTYSAELRDTIIWLFTPAQTPAQKT 494
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + + + T LD Q D L EL +E+ENGR+ RLL+KLG INERPE + D
Sbjct: 495 IDEFIRGVAGHIVTTLDQSQHQADELNTELYRELENGRVARLLMKLGAINERPEFDGDRA 554
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RYMLKLFRD++ HQV + P LDM H++ LNKLDAGT EKICL SRDEQ+V
Sbjct: 555 WSENGERYMLKLFRDHVFHQVDSNNNPVLDMGHMLRNLNKLDAGTDEKICLTSRDEQTVF 614
Query: 294 VVSYAELKQCLDQSFHELSSS 314
+VSY ELK+ L +F++L S
Sbjct: 615 IVSYKELKKQLGSAFNDLQKS 635
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 114/173 (65%), Gaps = 4/173 (2%)
Query: 307 SFHELSSSASLTPKSTLPLYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDSLEN 363
S ++S + S + T+ ++L + Q ++T+ + + + T LD Q D L
Sbjct: 464 SLEQMSRTYSAELRDTI-IWLFTPAQTPAQKTIDEFIRGVAGHIVTTLDQSQHQADELNT 522
Query: 364 ELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPW 423
EL +E+ENGR+ RLL+KLG INERPE + D WSE G+RYMLKLFRD++ HQV + P
Sbjct: 523 ELYRELENGRVARLLMKLGAINERPEFDGDRAWSENGERYMLKLFRDHVFHQVDSNNNPV 582
Query: 424 LDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSS 476
LDM H++ LNKLDAGT EKICL SRDEQ+V +VSY ELK+ L +F++L S
Sbjct: 583 LDMGHMLRNLNKLDAGTDEKICLTSRDEQTVFIVSYKELKKQLGSAFNDLQKS 635
>gi|71013618|ref|XP_758648.1| hypothetical protein UM02501.1 [Ustilago maydis 521]
gi|46098306|gb|EAK83539.1| hypothetical protein UM02501.1 [Ustilago maydis 521]
Length = 866
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 139/210 (66%), Gaps = 16/210 (7%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS--------- 167
Q+D+ LG LI+++ S+ A ++ +S+ A YSA+L+N++ +L++
Sbjct: 656 QEDMVNLGALIVSIGLNSISATN--DIASSLATFAGRYSAELKNVVAWLVAQTPAPYESV 713
Query: 168 -----VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 222
V R V +L+ ++G+ ++D+ + D +EN L KE+ENGRL RLL K G I
Sbjct: 714 GGDDVVEVARNVTELIKVLGSHCADEMDSALNYTDLMENSLMKELENGRLVRLLCKFGFI 773
Query: 223 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 282
NERPE + DP W+ETGDRY++KLFRD++ H V E GRP +D+SHI+ LNKLDAGT EKI
Sbjct: 774 NERPEFDHDPRWAETGDRYVIKLFRDHVFHSVDEAGRPVVDLSHILTNLNKLDAGTDEKI 833
Query: 283 CLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
L SRDEQS LVVSY E+K C++ +F +LS
Sbjct: 834 MLTSRDEQSCLVVSYREIKNCIESAFQDLS 863
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 106/145 (73%)
Query: 330 VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPE 389
V R V +L+ ++G+ ++D+ + D +EN L KE+ENGRL RLL K G INERPE
Sbjct: 719 VEVARNVTELIKVLGSHCADEMDSALNYTDLMENSLMKELENGRLVRLLCKFGFINERPE 778
Query: 390 LNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSR 449
+ DP W+ETGDRY++KLFRD++ H V E GRP +D+SHI+ LNKLDAGT EKI L SR
Sbjct: 779 FDHDPRWAETGDRYVIKLFRDHVFHSVDEAGRPVVDLSHILTNLNKLDAGTDEKIMLTSR 838
Query: 450 DEQSVLVVSYAELKQCLDQSFHELS 474
DEQS LVVSY E+K C++ +F +LS
Sbjct: 839 DEQSCLVVSYREIKNCIESAFQDLS 863
>gi|401887615|gb|EJT51596.1| poly(A)-specific ribonuclease [Trichosporon asahii var. asahii CBS
2479]
gi|406699748|gb|EKD02946.1| poly(A)-specific ribonuclease [Trichosporon asahii var. asahii CBS
8904]
Length = 624
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 141/195 (72%), Gaps = 5/195 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q+DL G+LILA+ + Q ++ +S++++ R+YS DL+NL+ YLL +T+
Sbjct: 431 QEDLLNFGQLILALCSDYVQPGQ--HIASSLEIIGRTYSPDLKNLVAYLLGKPTALKTID 488
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
+++ + G R +LDA+Q + D LE++L E+ENGR+ R+L+KLG INERPE ++DP WS
Sbjct: 489 EVLRLAGPRILNELDALQSYNDVLESDLGAEIENGRIARMLIKLGFINERPEFDMDPQWS 548
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG--TQEKICLMSRDEQSVL 293
E+GDRY+LKLFRDY+ HQV D +P LD+SH++ LNKLDAG ++EK+ L+SRD QS L
Sbjct: 549 ESGDRYVLKLFRDYVFHQVGPDRKPVLDLSHVLTTLNKLDAGARSREKVMLVSRDSQSCL 608
Query: 294 VVSYAELKQCLDQSF 308
VV Y ++ +C++ ++
Sbjct: 609 VVEYRDIYKCIESAY 623
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 107/139 (76%), Gaps = 2/139 (1%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
+T+ +++ + G R +LDA+Q + D LE++L E+ENGR+ R+L+KLG INERPE ++D
Sbjct: 485 KTIDEVLRLAGPRILNELDALQSYNDVLESDLGAEIENGRIARMLIKLGFINERPEFDMD 544
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG--TQEKICLMSRDE 451
P WSE+GDRY+LKLFRDY+ HQV D +P LD+SH++ LNKLDAG ++EK+ L+SRD
Sbjct: 545 PQWSESGDRYVLKLFRDYVFHQVGPDRKPVLDLSHVLTTLNKLDAGARSREKVMLVSRDS 604
Query: 452 QSVLVVSYAELKQCLDQSF 470
QS LVV Y ++ +C++ ++
Sbjct: 605 QSCLVVEYRDIYKCIESAY 623
>gi|168052362|ref|XP_001778619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669937|gb|EDQ56514.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1227
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 131/207 (63%), Gaps = 14/207 (6%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT--- 173
++DL G+LILA+ C S S++ M YSADL + LL+ +++
Sbjct: 1001 REDLAGCGRLILALACGS-------TANASLEFMGSHYSADLVRITQALLASSPEKSEGA 1053
Query: 174 ----VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
+ L + R + +++ V + D NELSKE ENGRL R+LVKLG INERPE +
Sbjct: 1054 GICSIRQLCSALADRMFNEIENVHMQNDENLNELSKETENGRLLRILVKLGMINERPEHD 1113
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
+DP WSE GDRY+LKLFRD + HQ E+G P +D H+V CLNKLDAG EK+ L+SRDE
Sbjct: 1114 MDPAWSEIGDRYLLKLFRDSVFHQTSEEGTPVIDWGHVVECLNKLDAGVPEKLILLSRDE 1173
Query: 290 QSVLVVSYAELKQCLDQSFHELSSSAS 316
+S+L+ SYA+LK+CL+ + EL AS
Sbjct: 1174 RSMLIASYADLKRCLENVYQELLVRAS 1200
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 78/144 (54%), Positives = 103/144 (71%)
Query: 335 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 394
++ L + R + +++ V + D NELSKE ENGRL R+LVKLG INERPE ++DP
Sbjct: 1057 SIRQLCSALADRMFNEIENVHMQNDENLNELSKETENGRLLRILVKLGMINERPEHDMDP 1116
Query: 395 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 454
WSE GDRY+LKLFRD + HQ E+G P +D H+V CLNKLDAG EK+ L+SRDE+S+
Sbjct: 1117 AWSEIGDRYLLKLFRDSVFHQTSEEGTPVIDWGHVVECLNKLDAGVPEKLILLSRDERSM 1176
Query: 455 LVVSYAELKQCLDQSFHELSSSAS 478
L+ SYA+LK+CL+ + EL AS
Sbjct: 1177 LIASYADLKRCLENVYQELLVRAS 1200
>gi|353234458|emb|CCA66483.1| related to Pab1 dependent poly(A)-specific ribonuclease PAN3
[Piriformospora indica DSM 11827]
Length = 582
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 138/203 (67%), Gaps = 8/203 (3%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL-----SVHQK 171
Q+D+ A G+L+LA+ CR+ A N +++ ++R YS +L+N I +LL + H
Sbjct: 379 QEDMIAFGRLMLALCCRN--ANIGINYAKTLEFISRVYSQELKNAIHFLLQPPPLATHGT 436
Query: 172 RTVV-DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
++ + IG R ++DA+QL DSLE +L+ E+ENGRL RLL K G INERPE
Sbjct: 437 PKIIGQVFDFIGGRLLQEMDAMQLRSDSLEAQLACELENGRLVRLLSKFGFINERPEFAR 496
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSETGD+Y++KLFRD + H V E GRP + +SH++ LNKLD G++EK+ L+SRDEQ
Sbjct: 497 DFRWSETGDKYIVKLFRDLVFHAVDEHGRPVVSLSHVLMHLNKLDCGSEEKLMLVSRDEQ 556
Query: 291 SVLVVSYAELKQCLDQSFHELSS 313
S LVVSY E+K+C++ +F EL S
Sbjct: 557 SCLVVSYKEIKRCVESAFRELVS 579
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 103/142 (72%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
+ + + IG R ++DA+QL DSLE +L+ E+ENGRL RLL K G INERPE D
Sbjct: 438 KIIGQVFDFIGGRLLQEMDAMQLRSDSLEAQLACELENGRLVRLLSKFGFINERPEFARD 497
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSETGD+Y++KLFRD + H V E GRP + +SH++ LNKLD G++EK+ L+SRDEQS
Sbjct: 498 FRWSETGDKYIVKLFRDLVFHAVDEHGRPVVSLSHVLMHLNKLDCGSEEKLMLVSRDEQS 557
Query: 454 VLVVSYAELKQCLDQSFHELSS 475
LVVSY E+K+C++ +F EL S
Sbjct: 558 CLVVSYKEIKRCVESAFRELVS 579
>gi|443897442|dbj|GAC74783.1| poly(a) ribonuclease subunit [Pseudozyma antarctica T-34]
Length = 871
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 152/259 (58%), Gaps = 21/259 (8%)
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLTALGKLIL 128
A ++ S + R I + +++ NP+ P L+ DDL LG LI+
Sbjct: 616 ARCIEASKVLRTAKNRVRINCCSVFDVIAFNPDETPSEALQAQQL----DDLVNLGALIV 671
Query: 129 AMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL---------------SVHQKRT 173
+ S+ A ++ +S+ + YSA+L+N++ +L+ + R+
Sbjct: 672 GLGLNSVSATN--DIASSLAIFGGRYSAELKNVLAWLVGQASSPHDGGAADDSTAEVARS 729
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V +L+ ++G ++D+ + D +EN L KE+ENGRL RLL K G INERPE + DP
Sbjct: 730 VGELVKVLGTHCADEMDSALNYTDLMENSLMKELENGRLVRLLCKFGFINERPEFDHDPR 789
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
W+ETGDRY++KLFRD++ H V E GRP +D+SHI+ LNKLDAGT EKI L SRDE S L
Sbjct: 790 WAETGDRYVIKLFRDHVFHAVDEAGRPVVDLSHILTNLNKLDAGTDEKIMLTSRDEHSCL 849
Query: 294 VVSYAELKQCLDQSFHELS 312
VVSY E+K C++ +F +LS
Sbjct: 850 VVSYREIKNCIEAAFQDLS 868
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 104/141 (73%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
R+V +L+ ++G ++D+ + D +EN L KE+ENGRL RLL K G INERPE + D
Sbjct: 728 RSVGELVKVLGTHCADEMDSALNYTDLMENSLMKELENGRLVRLLCKFGFINERPEFDHD 787
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
P W+ETGDRY++KLFRD++ H V E GRP +D+SHI+ LNKLDAGT EKI L SRDE S
Sbjct: 788 PRWAETGDRYVIKLFRDHVFHAVDEAGRPVVDLSHILTNLNKLDAGTDEKIMLTSRDEHS 847
Query: 454 VLVVSYAELKQCLDQSFHELS 474
LVVSY E+K C++ +F +LS
Sbjct: 848 CLVVSYREIKNCIEAAFQDLS 868
>gi|392577977|gb|EIW71105.1| hypothetical protein TREMEDRAFT_37565 [Tremella mesenterica DSM
1558]
Length = 438
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 136/207 (65%), Gaps = 3/207 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
++DL G LIL +TC L +D +AR Y+AD + I L++ Q R + +
Sbjct: 227 EEDLVMFGMLILTLTCEFFSP--GVPLAAPLDWIARHYTADFKLFISALVN-RQLRHIDE 283
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
++ IG R +LDA + D LE++L E+ENGRL RL+ KL +NER E DP WSE
Sbjct: 284 VIREIGPRILNELDASFRYNDQLESDLGGEVENGRLVRLMTKLSFVNERKEFERDPRWSE 343
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 296
TGDRY+LKLFRD++ H DG P LD+SH++ CLNKLDAGT+E++ L+SRDEQS LVVS
Sbjct: 344 TGDRYILKLFRDHVFHSTGTDGTPVLDLSHVLTCLNKLDAGTEERVMLVSRDEQSCLVVS 403
Query: 297 YAELKQCLDQSFHELSSSASLTPKSTL 323
Y ELK C++ +++EL ++S+ TL
Sbjct: 404 YRELKACVEGTYNELRLASSIISNPTL 430
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 110/155 (70%)
Query: 331 HQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL 390
Q R + +++ IG R +LDA + D LE++L E+ENGRL RL+ KL +NER E
Sbjct: 276 RQLRHIDEVIREIGPRILNELDASFRYNDQLESDLGGEVENGRLVRLMTKLSFVNERKEF 335
Query: 391 NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD 450
DP WSETGDRY+LKLFRD++ H DG P LD+SH++ CLNKLDAGT+E++ L+SRD
Sbjct: 336 ERDPRWSETGDRYILKLFRDHVFHSTGTDGTPVLDLSHVLTCLNKLDAGTEERVMLVSRD 395
Query: 451 EQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTL 485
EQS LVVSY ELK C++ +++EL ++S+ TL
Sbjct: 396 EQSCLVVSYRELKACVEGTYNELRLASSIISNPTL 430
>gi|403416514|emb|CCM03214.1| predicted protein [Fibroporia radiculosa]
Length = 1522
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 123/178 (69%), Gaps = 2/178 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
Q+DL KL+LA+ C +L A+ N+Q +I+ + R YSADL+ + L+L++ + +
Sbjct: 409 QEDLFMFAKLLLALCCSNLAAIN--NVQKAIETIGRHYSADLKAVALFLVTPAPNKAINQ 466
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
L MIG R T++ +Q D LE+EL E+EN RL RLL K G INERPE +P WSE
Sbjct: 467 LFDMIGNRVPTEMIEMQNAVDRLESELMSELENARLVRLLCKFGFINERPEFAREPRWSE 526
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
TGDRY++KLFRDY+ HQV E G P +++SH+ CLNKLDAGT E+I L++RDEQS LV
Sbjct: 527 TGDRYIIKLFRDYVFHQVDEQGNPVVNLSHVFTCLNKLDAGTDERIMLVARDEQSCLV 584
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 93/132 (70%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
L+L++ + + L MIG R T++ +Q D LE+EL E+EN RL RLL K G I
Sbjct: 453 LFLVTPAPNKAINQLFDMIGNRVPTEMIEMQNAVDRLESELMSELENARLVRLLCKFGFI 512
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERPE +P WSETGDRY++KLFRDY+ HQV E G P +++SH+ CLNKLDAGT E+I
Sbjct: 513 NERPEFAREPRWSETGDRYIIKLFRDYVFHQVDEQGNPVVNLSHVFTCLNKLDAGTDERI 572
Query: 445 CLMSRDEQSVLV 456
L++RDEQS LV
Sbjct: 573 MLVARDEQSCLV 584
>gi|168046403|ref|XP_001775663.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672936|gb|EDQ59466.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1438
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 133/210 (63%), Gaps = 14/210 (6%)
Query: 109 EVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV 168
EV ++DL G+L+LA+ C S S++ M YS ++ + +LL+
Sbjct: 1079 EVHRRTATKEDLAGCGRLVLALACGS-------TANASLEFMGSHYSNEIVRVTQHLLAS 1131
Query: 169 HQKRT-------VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 221
+++ + L + R +++++ V + D + ELSKE ENGRL R+LVKLG
Sbjct: 1132 SPEKSEGVGFSNIRQLHSFLADRMFSEIENVHMQNDEIMTELSKEAENGRLLRILVKLGM 1191
Query: 222 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 281
+NERPE ++DP WSE GDRY+LKLFRD++ HQ E+G P +D H++ CLNKLDAG EK
Sbjct: 1192 MNERPETDMDPGWSENGDRYLLKLFRDFVFHQTSEEGTPVIDWGHVIECLNKLDAGVPEK 1251
Query: 282 ICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
+ L+SRDE+S+L+ SYA+LK+CL+ + EL
Sbjct: 1252 LILLSRDERSMLIASYADLKRCLENVYQEL 1281
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 102/138 (73%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 395
+ L + R +++++ V + D + ELSKE ENGRL R+LVKLG +NERPE ++DP
Sbjct: 1144 IRQLHSFLADRMFSEIENVHMQNDEIMTELSKEAENGRLLRILVKLGMMNERPETDMDPG 1203
Query: 396 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 455
WSE GDRY+LKLFRD++ HQ E+G P +D H++ CLNKLDAG EK+ L+SRDE+S+L
Sbjct: 1204 WSENGDRYLLKLFRDFVFHQTSEEGTPVIDWGHVIECLNKLDAGVPEKLILLSRDERSML 1263
Query: 456 VVSYAELKQCLDQSFHEL 473
+ SYA+LK+CL+ + EL
Sbjct: 1264 IASYADLKRCLENVYQEL 1281
>gi|388583854|gb|EIM24155.1| hypothetical protein WALSEDRAFT_14124 [Wallemia sebi CBS 633.66]
Length = 416
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 131/197 (66%), Gaps = 6/197 (3%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q+DL ++G L+L++ + AV N +I+ +R Y DL+ ++L+LL +T
Sbjct: 220 QEDLVSVGTLLLSLALGNSKAVT-SNPTKAIEYFSRQYGPDLQRIVLWLLGNRSPLKTAE 278
Query: 176 DLMPMIG----ARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 231
+L MI +D+ D L+NELSKE+ENGRL RLL K INER E + D
Sbjct: 279 ELWSMITKINPGIVAEVIDSSLTANDRLDNELSKEVENGRLVRLLCKFNFINERAEFDFD 338
Query: 232 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 291
P WSETGDRY++KLFRDY+ HQV E+G+P LDMSH++ CLNKLDAG E I L+SRDEQS
Sbjct: 339 PRWSETGDRYIIKLFRDYVFHQVDENGKPVLDMSHVLVCLNKLDAGVDESIMLISRDEQS 398
Query: 292 VLVVSYAELKQCLDQSF 308
LVVSY E+KQC++ +F
Sbjct: 399 CLVVSYKEVKQCVESAF 415
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 94/120 (78%)
Query: 351 LDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRD 410
+D+ D L+NELSKE+ENGRL RLL K INER E + DP WSETGDRY++KLFRD
Sbjct: 296 IDSSLTANDRLDNELSKEVENGRLVRLLCKFNFINERAEFDFDPRWSETGDRYIIKLFRD 355
Query: 411 YLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSF 470
Y+ HQV E+G+P LDMSH++ CLNKLDAG E I L+SRDEQS LVVSY E+KQC++ +F
Sbjct: 356 YVFHQVDENGKPVLDMSHVLVCLNKLDAGVDESIMLISRDEQSCLVVSYKEVKQCVESAF 415
>gi|388858359|emb|CCF48088.1| related to Pab1 dependent poly(A)-specific ribonuclease PAN3
[Ustilago hordei]
Length = 908
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 133/207 (64%), Gaps = 14/207 (6%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL----------- 166
+DL LG LI+ + S+ A ++ S+ + A YSA+L+N++ +L+
Sbjct: 701 EDLVNLGALIVGIGLNSISATN--DIAASLAMFAGRYSAELKNVVAWLVGQSPAPRDANE 758
Query: 167 -SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINER 225
+ RTV +L+ +G ++D+ + D +EN L KE+EN RL RLL K G INER
Sbjct: 759 ETSQVPRTVNELVKTLGIHCSDEMDSALNYTDLMENSLMKELENARLVRLLCKFGFINER 818
Query: 226 PELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLM 285
PE + DP W+ETGDRY++KLFRD++ H V E GRP +D+SHI+ LNKLDAGT EKI L
Sbjct: 819 PEFDHDPRWAETGDRYVIKLFRDHVFHSVDEAGRPVVDLSHILTNLNKLDAGTDEKIMLT 878
Query: 286 SRDEQSVLVVSYAELKQCLDQSFHELS 312
SRDE S LVVSY E+K C++ +F +LS
Sbjct: 879 SRDEHSCLVVSYREIKNCIESAFQDLS 905
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 102/141 (72%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
RTV +L+ +G ++D+ + D +EN L KE+EN RL RLL K G INERPE + D
Sbjct: 765 RTVNELVKTLGIHCSDEMDSALNYTDLMENSLMKELENARLVRLLCKFGFINERPEFDHD 824
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
P W+ETGDRY++KLFRD++ H V E GRP +D+SHI+ LNKLDAGT EKI L SRDE S
Sbjct: 825 PRWAETGDRYVIKLFRDHVFHSVDEAGRPVVDLSHILTNLNKLDAGTDEKIMLTSRDEHS 884
Query: 454 VLVVSYAELKQCLDQSFHELS 474
LVVSY E+K C++ +F +LS
Sbjct: 885 CLVVSYREIKNCIESAFQDLS 905
>gi|358385011|gb|EHK22608.1| hypothetical protein TRIVIDRAFT_179930 [Trichoderma virens Gv29-8]
Length = 592
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 133/202 (65%), Gaps = 4/202 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS---VHQKRT 173
Q+DL G+ +L + +L +Q NL +++ M+R+YS ++R+ I +LL+ ++
Sbjct: 386 QEDLLHFGRTLLCLATGTL-PLQLTNLNAAMEQMSRTYSTEMRDTITWLLTPTPAPAHKS 444
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + + I + D Q D+L +EL +E+ENGR+ RL++KLGTINER E D
Sbjct: 445 IDEFIQGIATHIVSAFDQSQHRADALNSELFRELENGRIARLMMKLGTINERQEFEGDRA 504
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RYMLKLFRDY+ HQV +G P +D+ H++ CLNKLDAG E+ICL SRDEQ+
Sbjct: 505 WSENGERYMLKLFRDYVFHQVDSNGNPVMDIGHMIRCLNKLDAGVDERICLTSRDEQTSF 564
Query: 294 VVSYAELKQCLDQSFHELSSSA 315
VVSY ELK+ L +F+EL +A
Sbjct: 565 VVSYKELKKQLANAFNELIKTA 586
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 100/144 (69%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
+++ + + I + D Q D+L +EL +E+ENGR+ RL++KLGTINER E D
Sbjct: 443 KSIDEFIQGIATHIVSAFDQSQHRADALNSELFRELENGRIARLMMKLGTINERQEFEGD 502
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RYMLKLFRDY+ HQV +G P +D+ H++ CLNKLDAG E+ICL SRDEQ+
Sbjct: 503 RAWSENGERYMLKLFRDYVFHQVDSNGNPVMDIGHMIRCLNKLDAGVDERICLTSRDEQT 562
Query: 454 VLVVSYAELKQCLDQSFHELSSSA 477
VVSY ELK+ L +F+EL +A
Sbjct: 563 SFVVSYKELKKQLANAFNELIKTA 586
>gi|390596469|gb|EIN05871.1| hypothetical protein PUNSTDRAFT_106925 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 701
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 128/197 (64%), Gaps = 1/197 (0%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV-HQKRTVV 175
Q+DL G+LI ++ + N+ D +AR Y D++NL+LYL S + +
Sbjct: 503 QEDLQMFGRLIYSLCLGTSNLGNFANVSKVFDGIARQYGQDVKNLLLYLTSKPGPHKNIT 562
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
+ MIG + +LD Q D LE EL E+ENGRL RLL K G INERPE +P WS
Sbjct: 563 HCLDMIGGKAVRELDEAQGAVDRLEAELMSELENGRLVRLLCKFGFINERPEFAHEPRWS 622
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY++KLFRDY+ HQV E GR ++M H++ CLNKLDA ++E+I L+S DEQS LVV
Sbjct: 623 ETGDRYIIKLFRDYVFHQVDEQGRAVVNMGHVLTCLNKLDASSEERILLVSPDEQSCLVV 682
Query: 296 SYAELKQCLDQSFHELS 312
++ ++K C++ +F EL+
Sbjct: 683 TFKDVKLCMESAFSELA 699
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 100/141 (70%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
+ + + MIG + +LD Q D LE EL E+ENGRL RLL K G INERPE +
Sbjct: 559 KNITHCLDMIGGKAVRELDEAQGAVDRLEAELMSELENGRLVRLLCKFGFINERPEFAHE 618
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
P WSETGDRY++KLFRDY+ HQV E GR ++M H++ CLNKLDA ++E+I L+S DEQS
Sbjct: 619 PRWSETGDRYIIKLFRDYVFHQVDEQGRAVVNMGHVLTCLNKLDASSEERILLVSPDEQS 678
Query: 454 VLVVSYAELKQCLDQSFHELS 474
LVV++ ++K C++ +F EL+
Sbjct: 679 CLVVTFKDVKLCMESAFSELA 699
>gi|440634708|gb|ELR04627.1| hypothetical protein GMDG_06909 [Geomyces destructans 20631-21]
Length = 640
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 133/204 (65%), Gaps = 5/204 (2%)
Query: 119 DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS---VHQKRTVV 175
DL GKLILA+ +L+ Q N++ +++ + R YSA++R+ +L+LL+ R++
Sbjct: 435 DLQLFGKLILAIGTNNLLTQQ--NMKVAVEQLGRIYSAEIRDTVLWLLTPAVAPATRSID 492
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
+ + I + + LD+ D L +ELS+E+ENGRL RLL+KLGTINER E D WS
Sbjct: 493 EFLCGISSHVVSSLDSAFHQADRLASELSRELENGRLARLLMKLGTINERQEYEGDRNWS 552
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
E G+RYMLKLFRDY+ HQV G P LD+ H++ CLNKLDAG EKI L SRD+Q+ VV
Sbjct: 553 ENGERYMLKLFRDYVFHQVDAVGNPVLDIGHMIRCLNKLDAGVDEKILLTSRDDQTSFVV 612
Query: 296 SYAELKQCLDQSFHELSSSASLTP 319
+Y ELK+ + +F +L A P
Sbjct: 613 TYKELKKQVAAAFGDLMKPAGTKP 636
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 99/148 (66%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
R++ + + I + + LD+ D L +ELS+E+ENGRL RLL+KLGTINER E D
Sbjct: 489 RSIDEFLCGISSHVVSSLDSAFHQADRLASELSRELENGRLARLLMKLGTINERQEYEGD 548
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RYMLKLFRDY+ HQV G P LD+ H++ CLNKLDAG EKI L SRD+Q+
Sbjct: 549 RNWSENGERYMLKLFRDYVFHQVDAVGNPVLDIGHMIRCLNKLDAGVDEKILLTSRDDQT 608
Query: 454 VLVVSYAELKQCLDQSFHELSSSASLTP 481
VV+Y ELK+ + +F +L A P
Sbjct: 609 SFVVTYKELKKQVAAAFGDLMKPAGTKP 636
>gi|358393464|gb|EHK42865.1| hypothetical protein TRIATDRAFT_266433 [Trichoderma atroviride IMI
206040]
Length = 589
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 140/209 (66%), Gaps = 5/209 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK----R 172
QDDL G+ +L + + M +Q N+ +I+ M+R+YS +L++ I++LL+ Q +
Sbjct: 381 QDDLVHFGRTLLCLATNT-MPMQMTNMNAAIEQMSRNYSTELKDTIMWLLTPAQPPAHPK 439
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
++ D +P I T +D + ++L +E+ KE+EN RL RL++KLGTI++RPE D
Sbjct: 440 SIGDFIPGIANHIVTTMDQIDHSYNNLRSEMFKELENSRLLRLMLKLGTIDDRPEYENDR 499
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
WS+ G+RYMLKLFRDY+ HQV +G P DM H++ CLN+LDAGT+E I L SRDEQ+
Sbjct: 500 AWSDFGERYMLKLFRDYVFHQVDGNGNPVFDMGHMIRCLNRLDAGTEENIRLTSRDEQTS 559
Query: 293 LVVSYAELKQCLDQSFHELSSSASLTPKS 321
++VSY ++K+ + +F +L ++S T +S
Sbjct: 560 IIVSYKDVKKQVLAAFGDLYKASSKTGRS 588
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 122/184 (66%), Gaps = 5/184 (2%)
Query: 304 LDQSFHELSSSASLTPKSTLPLYLLSVHQK----RTVVDLMPMIGARYYTQLDAVQLHGD 359
++ + ++S + S K T+ ++LL+ Q +++ D +P I T +D + +
Sbjct: 406 MNAAIEQMSRNYSTELKDTI-MWLLTPAQPPAHPKSIGDFIPGIANHIVTTMDQIDHSYN 464
Query: 360 SLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQED 419
+L +E+ KE+EN RL RL++KLGTI++RPE D WS+ G+RYMLKLFRDY+ HQV +
Sbjct: 465 NLRSEMFKELENSRLLRLMLKLGTIDDRPEYENDRAWSDFGERYMLKLFRDYVFHQVDGN 524
Query: 420 GRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASL 479
G P DM H++ CLN+LDAGT+E I L SRDEQ+ ++VSY ++K+ + +F +L ++S
Sbjct: 525 GNPVFDMGHMIRCLNRLDAGTEENIRLTSRDEQTSIIVSYKDVKKQVLAAFGDLYKASSK 584
Query: 480 TPKS 483
T +S
Sbjct: 585 TGRS 588
>gi|195169556|ref|XP_002025587.1| GL20783 [Drosophila persimilis]
gi|194109080|gb|EDW31123.1| GL20783 [Drosophila persimilis]
Length = 793
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 104/240 (43%), Positives = 140/240 (58%), Gaps = 60/240 (25%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 583 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 641
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 642 TTNNRRSVTDLMPMIGARFYTQLDALQSQIDMQEDELAKEMENGRLYRILVKLNSINERP 701
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKIC--- 283
E+ + G W+ + + + LNKLDAG+ E++
Sbjct: 702 EM------AALG----------------------WITHT-LYNTLNKLDAGSIERVSXXX 732
Query: 284 ---------------------------LMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
VL+VSYAELK CL+ +F EL SSA+
Sbjct: 733 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLIVSYAELKNCLENAFSELMSSAA 792
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 95/184 (51%), Gaps = 59/184 (32%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 638 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSQIDMQEDELAKEMENGRLYRILVKLNSI 697
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERPE+ + G W+ + + + LNKLDAG+ E++
Sbjct: 698 NERPEM------AALG----------------------WITHT-LYNTLNKLDAGSIERV 728
Query: 445 C------------------------------LMSRDEQSVLVVSYAELKQCLDQSFHELS 474
VL+VSYAELK CL+ +F EL
Sbjct: 729 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLIVSYAELKNCLENAFSELM 788
Query: 475 SSAS 478
SSA+
Sbjct: 789 SSAA 792
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 56/124 (45%), Gaps = 18/124 (14%)
Query: 9 QENFGGTTYFY-------QAPSSGTEVPGAAGPAPGDDLSAP-----GVLSSPPGYTMH- 55
QEN GGT YFY P + V A PA S P G + S YT H
Sbjct: 269 QENVGGTIYFYPTANAQGNQPVVNSVVVDATHPAHHGVSSVPTMSSVGGVPSALMYTGHV 328
Query: 56 -PGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDN 112
PG +V P T S+F++ + +RA+I +N ++ ++ A LP EVDN
Sbjct: 329 YPGPASNVITMQPK--THLESAFFIPDEMRADILARNEISNLIMDAAEAAQHALPHEVDN 386
Query: 113 YHDL 116
YH L
Sbjct: 387 YHAL 390
>gi|343427718|emb|CBQ71245.1| related to Pab1 dependent poly(A)-specific ribonuclease PAN3
[Sporisorium reilianum SRZ2]
Length = 872
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 136/208 (65%), Gaps = 15/208 (7%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL----------- 166
+DL LG LI+++ + A + ++ +S+ + A YSA+L+N++ +L+
Sbjct: 664 EDLVNLGALIVSVGLNNFSAPK--DMASSLAVFAGRYSAELKNVVAWLVGQTAAPHEATA 721
Query: 167 --SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINE 224
+ R V +L+ ++G+ ++D+ + D +EN L KE+ENGRL RLL K G INE
Sbjct: 722 EDAAEVTRNVGELVKVLGSHCADEMDSALNYTDLMENSLMKELENGRLVRLLCKFGFINE 781
Query: 225 RPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICL 284
RPE + D W+ETGDRY++KLFRD++ H V E GRP +D+SHI+ LNKLDAGT EKI L
Sbjct: 782 RPEFDHDLRWAETGDRYVIKLFRDHVFHSVDEAGRPVVDLSHILTNLNKLDAGTDEKIML 841
Query: 285 MSRDEQSVLVVSYAELKQCLDQSFHELS 312
SRDE S LVVSY E+K C++ +F +LS
Sbjct: 842 TSRDEHSCLVVSYREIKNCIENAFQDLS 869
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/141 (55%), Positives = 103/141 (73%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
R V +L+ ++G+ ++D+ + D +EN L KE+ENGRL RLL K G INERPE + D
Sbjct: 729 RNVGELVKVLGSHCADEMDSALNYTDLMENSLMKELENGRLVRLLCKFGFINERPEFDHD 788
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
W+ETGDRY++KLFRD++ H V E GRP +D+SHI+ LNKLDAGT EKI L SRDE S
Sbjct: 789 LRWAETGDRYVIKLFRDHVFHSVDEAGRPVVDLSHILTNLNKLDAGTDEKIMLTSRDEHS 848
Query: 454 VLVVSYAELKQCLDQSFHELS 474
LVVSY E+K C++ +F +LS
Sbjct: 849 CLVVSYREIKNCIENAFQDLS 869
>gi|310794010|gb|EFQ29471.1| hypothetical protein GLRG_04615 [Glomerella graminicola M1.001]
Length = 498
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 131/199 (65%), Gaps = 5/199 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS----VHQKR 172
Q+DL GKLIL++ + Q NL+ S++ M+R YS +L + +L+LL+ +
Sbjct: 284 QEDLIQFGKLILSLATNT-PPHQLTNLKGSMEQMSRVYSKELTDTVLWLLTPAPAGATPK 342
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
+ + + I LDA D++++EL +E+ENGRL RL+ KLGT+NER E + D
Sbjct: 343 GIEEFVRGIAVHMVATLDASLQEADTMKSELFRELENGRLVRLMAKLGTVNERQEFDGDR 402
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
WSE G+RYMLKLFRDY+ HQV +G P +DM HI+ CLN+LDAG+ ++ICL SRDEQ+
Sbjct: 403 AWSENGERYMLKLFRDYVFHQVDANGNPVVDMGHIIRCLNRLDAGSDDRICLTSRDEQTS 462
Query: 293 LVVSYAELKQCLDQSFHEL 311
VVSY +LK+ L +F EL
Sbjct: 463 FVVSYKDLKKQLSNAFGEL 481
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 98/140 (70%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
+ + + + I LDA D++++EL +E+ENGRL RL+ KLGT+NER E + D
Sbjct: 342 KGIEEFVRGIAVHMVATLDASLQEADTMKSELFRELENGRLVRLMAKLGTVNERQEFDGD 401
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RYMLKLFRDY+ HQV +G P +DM HI+ CLN+LDAG+ ++ICL SRDEQ+
Sbjct: 402 RAWSENGERYMLKLFRDYVFHQVDANGNPVVDMGHIIRCLNRLDAGSDDRICLTSRDEQT 461
Query: 454 VLVVSYAELKQCLDQSFHEL 473
VVSY +LK+ L +F EL
Sbjct: 462 SFVVSYKDLKKQLSNAFGEL 481
>gi|429847941|gb|ELA23486.1| pab-dependent poly -specific ribonuclease subunit pan3
[Colletotrichum gloeosporioides Nara gc5]
Length = 449
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 130/203 (64%), Gaps = 8/203 (3%)
Query: 117 QDDLTALGKLILAMTCRSL----MAVQRENLQTSIDLMARSYSADLRNLILYLLS----V 168
Q+DL GKLIL++ +L +Q L+ I+ M R+YS ++ + +L+LL+
Sbjct: 230 QEDLIHFGKLILSLAINTLPNQLTNLQASQLKGPIEQMGRTYSKEITDTVLWLLTPAPPG 289
Query: 169 HQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL 228
+ + + + I LDA D+L++EL +E+ENGRL RL+ KLG +NER E
Sbjct: 290 ATPKGIEEFVRGIAVHMVATLDASLHEADTLKSELFRELENGRLVRLMAKLGAVNERQEF 349
Query: 229 NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD 288
+ D WSE G+RYMLKLFRDY+ HQV +G P +DM HI+ CLN+LDAG+ ++ICL SRD
Sbjct: 350 DGDRAWSENGERYMLKLFRDYVFHQVDANGNPVVDMGHIIRCLNRLDAGSDDRICLTSRD 409
Query: 289 EQSVLVVSYAELKQCLDQSFHEL 311
EQ+ VVSY ELK+ L +F EL
Sbjct: 410 EQTSFVVSYKELKKQLGNAFGEL 432
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 97/140 (69%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
+ + + + I LDA D+L++EL +E+ENGRL RL+ KLG +NER E + D
Sbjct: 293 KGIEEFVRGIAVHMVATLDASLHEADTLKSELFRELENGRLVRLMAKLGAVNERQEFDGD 352
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RYMLKLFRDY+ HQV +G P +DM HI+ CLN+LDAG+ ++ICL SRDEQ+
Sbjct: 353 RAWSENGERYMLKLFRDYVFHQVDANGNPVVDMGHIIRCLNRLDAGSDDRICLTSRDEQT 412
Query: 454 VLVVSYAELKQCLDQSFHEL 473
VVSY ELK+ L +F EL
Sbjct: 413 SFVVSYKELKKQLGNAFGEL 432
>gi|380491284|emb|CCF35427.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Colletotrichum higginsianum]
Length = 250
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 131/199 (65%), Gaps = 5/199 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS----VHQKR 172
Q+DL GKLIL++ + Q NL+ S++ M+R YS ++ + +L+LL+ +
Sbjct: 36 QEDLIQFGKLILSLATNT-PPNQLTNLKGSMEQMSRVYSKEITDTVLWLLTPAPAGATPK 94
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
+ + + I LDA D++++EL +E+ENGRL RL+ KLGTINER E + D
Sbjct: 95 GIEEFIRGIAVHMVATLDASLQEADTMKSELFRELENGRLVRLMAKLGTINERQEFDGDR 154
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
WSE G+RYMLKLFRDY+ HQV +G P +DM HI+ CLN+LDAG+ ++ICL SRDEQ+
Sbjct: 155 AWSENGERYMLKLFRDYVFHQVDANGNPVVDMGHIIRCLNRLDAGSDDRICLTSRDEQTS 214
Query: 293 LVVSYAELKQCLDQSFHEL 311
VVSY +LK+ L +F EL
Sbjct: 215 FVVSYKDLKKQLGNAFGEL 233
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 98/140 (70%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
+ + + + I LDA D++++EL +E+ENGRL RL+ KLGTINER E + D
Sbjct: 94 KGIEEFIRGIAVHMVATLDASLQEADTMKSELFRELENGRLVRLMAKLGTINERQEFDGD 153
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RYMLKLFRDY+ HQV +G P +DM HI+ CLN+LDAG+ ++ICL SRDEQ+
Sbjct: 154 RAWSENGERYMLKLFRDYVFHQVDANGNPVVDMGHIIRCLNRLDAGSDDRICLTSRDEQT 213
Query: 454 VLVVSYAELKQCLDQSFHEL 473
VVSY +LK+ L +F EL
Sbjct: 214 SFVVSYKDLKKQLGNAFGEL 233
>gi|345563730|gb|EGX46715.1| hypothetical protein AOL_s00097g463 [Arthrobotrys oligospora ATCC
24927]
Length = 864
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 124/186 (66%), Gaps = 5/186 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL---SVHQKRT 173
Q+D A G++ILA+ C + A N Q S+D ++R+YS +L+N +LY+ + RT
Sbjct: 496 QEDYLAFGRVILAIACNNPHAAL--NAQKSMDYVSRTYSPELKNFLLYVFNGPASGGPRT 553
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ +L+ MI + D+ D+LE +L E+ENGRL RLL K G INERPE D
Sbjct: 554 MEELLGMISFQLVQNFDSSLHQNDTLEAQLGGELENGRLVRLLCKFGFINERPEFAHDQA 613
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETGDRY++KLFRDY+ HQV E G P +D+ H++ LNKLDAGT E+I L+SRDEQ+ L
Sbjct: 614 WSETGDRYLIKLFRDYVFHQVDEAGNPVIDIVHVLSSLNKLDAGTDERIMLVSRDEQNCL 673
Query: 294 VVSYAE 299
+VS+ E
Sbjct: 674 IVSFRE 679
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 90/128 (70%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
RT+ +L+ MI + D+ D+LE +L E+ENGRL RLL K G INERPE D
Sbjct: 552 RTMEELLGMISFQLVQNFDSSLHQNDTLEAQLGGELENGRLVRLLCKFGFINERPEFAHD 611
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSETGDRY++KLFRDY+ HQV E G P +D+ H++ LNKLDAGT E+I L+SRDEQ+
Sbjct: 612 QAWSETGDRYLIKLFRDYVFHQVDEAGNPVIDIVHVLSSLNKLDAGTDERIMLVSRDEQN 671
Query: 454 VLVVSYAE 461
L+VS+ E
Sbjct: 672 CLIVSFRE 679
>gi|393219461|gb|EJD04948.1| hypothetical protein FOMMEDRAFT_18642 [Fomitiporia mediterranea
MF3/22]
Length = 473
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 129/197 (65%), Gaps = 3/197 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS-VHQKRTVV 175
Q+DL +LI+++ C + +A N+ ++D + R Y +++++I YL+ + +
Sbjct: 276 QEDLVMFARLIMSLACNNPLATS--NVHRALDHVHRHYPGNIKDVIHYLMKDPGPMKNIR 333
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
L + ++LDA D LE EL E+EN RL RLL K G INERPE + DP WS
Sbjct: 334 GLFDTFAGKLVSELDAAHASVDKLEGELMGELENARLVRLLCKFGFINERPEFDRDPRWS 393
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY++KLFRDY+ H V E G P +++ H++ LNKLDAG++E++ L+SRDEQS LVV
Sbjct: 394 ETGDRYIIKLFRDYVFHSVDESGNPVVNLGHVLTNLNKLDAGSEERLMLVSRDEQSCLVV 453
Query: 296 SYAELKQCLDQSFHELS 312
SY E+K C++ +F +LS
Sbjct: 454 SYKEVKNCIEAAFSDLS 470
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 98/141 (69%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
+ + L + ++LDA D LE EL E+EN RL RLL K G INERPE + D
Sbjct: 330 KNIRGLFDTFAGKLVSELDAAHASVDKLEGELMGELENARLVRLLCKFGFINERPEFDRD 389
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
P WSETGDRY++KLFRDY+ H V E G P +++ H++ LNKLDAG++E++ L+SRDEQS
Sbjct: 390 PRWSETGDRYIIKLFRDYVFHSVDESGNPVVNLGHVLTNLNKLDAGSEERLMLVSRDEQS 449
Query: 454 VLVVSYAELKQCLDQSFHELS 474
LVVSY E+K C++ +F +LS
Sbjct: 450 CLVVSYKEVKNCIEAAFSDLS 470
>gi|407919167|gb|EKG12422.1| Zinc finger CCCH-type protein [Macrophomina phaseolina MS6]
Length = 652
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 136/218 (62%), Gaps = 16/218 (7%)
Query: 108 LEVDNYHDLQD----DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLIL 163
L DN +Q+ D LG+LI+ T S ++ N+Q ++D+++RSYS DL + +
Sbjct: 431 LNFDNIRSIQELQQEDFQQLGRLII--TIASNNSINPVNVQKALDILSRSYSKDLMDCVS 488
Query: 164 YLLSVHQK----------RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLF 213
+LLS + + + I + LD D+L + L +E+ENGRL
Sbjct: 489 WLLSPPPSQGMQSPGVPSKDITTFIRSISDKMAILLDNTFHAEDTLNSNLGRELENGRLV 548
Query: 214 RLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNK 273
RL+ KL INERPE +P WSETG+RY LKLFRDY+ HQV G P +D+ H+++CLNK
Sbjct: 549 RLMAKLNFINERPEFENNPQWSETGERYYLKLFRDYVFHQVDGSGHPVVDLGHVINCLNK 608
Query: 274 LDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
LD G+ EKI L+SRDEQ+VLVVSY E+K+ ++Q+F+EL
Sbjct: 609 LDVGSDEKISLVSRDEQNVLVVSYREVKRGVEQTFNEL 646
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 100/140 (71%), Gaps = 7/140 (5%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
R++ D M ++ LD D+L + L +E+ENGRL RL+ KL INERPE +
Sbjct: 514 RSISDKMAIL-------LDNTFHAEDTLNSNLGRELENGRLVRLMAKLNFINERPEFENN 566
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
P WSETG+RY LKLFRDY+ HQV G P +D+ H+++CLNKLD G+ EKI L+SRDEQ+
Sbjct: 567 PQWSETGERYYLKLFRDYVFHQVDGSGHPVVDLGHVINCLNKLDVGSDEKISLVSRDEQN 626
Query: 454 VLVVSYAELKQCLDQSFHEL 473
VLVVSY E+K+ ++Q+F+EL
Sbjct: 627 VLVVSYREVKRGVEQTFNEL 646
>gi|21749646|dbj|BAC03632.1| unnamed protein product [Homo sapiens]
Length = 126
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/123 (65%), Positives = 102/123 (82%)
Query: 194 LHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQ 253
+ D +E +L+KE++NGRLFRLL KLGTINE PE DPTWSETGDRY+LKLFRD+L HQ
Sbjct: 1 MRNDVIEEDLAKEVQNGRLFRLLAKLGTINEGPEFQKDPTWSETGDRYLLKLFRDHLFHQ 60
Query: 254 VQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSS 313
V E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV+Y++LK+C + +F EL +
Sbjct: 61 VTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIA 120
Query: 314 SAS 316
+A+
Sbjct: 121 AAN 123
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/123 (65%), Positives = 102/123 (82%)
Query: 356 LHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQ 415
+ D +E +L+KE++NGRLFRLL KLGTINE PE DPTWSETGDRY+LKLFRD+L HQ
Sbjct: 1 MRNDVIEEDLAKEVQNGRLFRLLAKLGTINEGPEFQKDPTWSETGDRYLLKLFRDHLFHQ 60
Query: 416 VQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSS 475
V E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV+Y++LK+C + +F EL +
Sbjct: 61 VTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIA 120
Query: 476 SAS 478
+A+
Sbjct: 121 AAN 123
>gi|403163330|ref|XP_003323414.2| hypothetical protein PGTG_04951 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164011|gb|EFP78995.2| hypothetical protein PGTG_04951 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 741
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 148/247 (59%), Gaps = 14/247 (5%)
Query: 71 TVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQ-DDLTALGKLILA 129
T+D + ++ R I L + +P PE DLQ +DL LG LI +
Sbjct: 503 TIDPTKIILTGTNRVRINACGILDVTEYSPNQSPE---------DLQVEDLRDLGCLICS 553
Query: 130 MTCRSL-MAVQRENLQTSIDLMARSYSADLRNLILYLLSVH---QKRTVVDLMPMIGARY 185
+ S+ + +L ++ + + YSA+L ++ YLL+ ++ L+ M+ +R
Sbjct: 554 LASSSICIKTDNNSLTKGVEYVKQFYSAELSEVVAYLLAPALDGHTISIEGLLRMLWSRS 613
Query: 186 YTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKL 245
++ V H D LE LS+E+ENGRL RL+VKLG INERPE + DP WSET +RY+LKL
Sbjct: 614 LDEMTKVFNHNDLLEESLSRELENGRLVRLMVKLGFINERPEFDHDPNWSETSERYLLKL 673
Query: 246 FRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLD 305
FRDY+ HQV +P D+SH++ CLNKLD + EK+ L+SRD+Q+ +V+YAE+++ +D
Sbjct: 674 FRDYVFHQVDSQAKPVTDLSHVLMCLNKLDTSSDEKLTLISRDDQTCAIVTYAEIRRIMD 733
Query: 306 QSFHELS 312
+F +LS
Sbjct: 734 SAFRDLS 740
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 102/140 (72%)
Query: 335 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 394
++ L+ M+ +R ++ V H D LE LS+E+ENGRL RL+VKLG INERPE + DP
Sbjct: 601 SIEGLLRMLWSRSLDEMTKVFNHNDLLEESLSRELENGRLVRLMVKLGFINERPEFDHDP 660
Query: 395 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 454
WSET +RY+LKLFRDY+ HQV +P D+SH++ CLNKLD + EK+ L+SRD+Q+
Sbjct: 661 NWSETSERYLLKLFRDYVFHQVDSQAKPVTDLSHVLMCLNKLDTSSDEKLTLISRDDQTC 720
Query: 455 LVVSYAELKQCLDQSFHELS 474
+V+YAE+++ +D +F +LS
Sbjct: 721 AIVTYAEIRRIMDSAFRDLS 740
>gi|255941636|ref|XP_002561587.1| Pc16g12880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586210|emb|CAP93958.1| Pc16g12880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 610
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 133/215 (61%), Gaps = 9/215 (4%)
Query: 108 LEVDNYHDLQD----DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLIL 163
++ DN + D DL G+LI+ + + N +++ R+YS+ L+N +
Sbjct: 394 VQFDNQRTVADLQRQDLVNFGQLIVTLGANTPTVAH--NPTKAMEHFTRAYSSQLKNSVF 451
Query: 164 YLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG 220
+LL+ QK RT+ + I ++ + D+ D L ++L++E+ENGR+ RLL KLG
Sbjct: 452 WLLNGLQKDQERTIDTFIAGISSQLMSTFDSALHLDDQLNSDLARELENGRIARLLSKLG 511
Query: 221 TINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQE 280
INERPE LDP WSE+G+RY LKLFRDY+ H V G P +D+ H++ CLNKLDAGT E
Sbjct: 512 FINERPEYELDPRWSESGERYFLKLFRDYVFHSVDSQGDPVVDLGHVLTCLNKLDAGTDE 571
Query: 281 KICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 315
KI L+SRD+QS +VSY E+K+ L+ SF L A
Sbjct: 572 KIHLVSRDDQSSFIVSYKEVKKALESSFQALMKPA 606
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 101/146 (69%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+RT+ + I ++ + D+ D L ++L++E+ENGR+ RLL KLG INERPE
Sbjct: 461 QERTIDTFIAGISSQLMSTFDSALHLDDQLNSDLARELENGRIARLLSKLGFINERPEYE 520
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
LDP WSE+G+RY LKLFRDY+ H V G P +D+ H++ CLNKLDAGT EKI L+SRD+
Sbjct: 521 LDPRWSESGERYFLKLFRDYVFHSVDSQGDPVVDLGHVLTCLNKLDAGTDEKIHLVSRDD 580
Query: 452 QSVLVVSYAELKQCLDQSFHELSSSA 477
QS +VSY E+K+ L+ SF L A
Sbjct: 581 QSSFIVSYKEVKKALESSFQALMKPA 606
>gi|346977240|gb|EGY20692.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Verticillium dahliae VdLs.17]
Length = 631
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 129/199 (64%), Gaps = 4/199 (2%)
Query: 117 QDDLTALGKLILAMTCRS-LMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---R 172
Q+DLT +G+L+L++ + A+ N+ + M +S L + +++L+ Q +
Sbjct: 422 QEDLTQVGRLMLSLASNTPANAITANNINIIMQQMGNMFSEPLVSSLMWLVYPSQNGETK 481
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
T+ + I ++ +D + D+L + L E+ENGRLFRLL +LGTINER E + D
Sbjct: 482 TIETFISKISSQVMANMDMMLHQNDALTSNLYSEIENGRLFRLLCRLGTINERQEFDGDR 541
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
WSE G+RYMLKLFRDY+ HQV +G+P +D+ HIV LNKLDAG+ EKICL SRDEQSV
Sbjct: 542 QWSENGERYMLKLFRDYVFHQVDANGQPVVDLGHIVRSLNKLDAGSDEKICLTSRDEQSV 601
Query: 293 LVVSYAELKQCLDQSFHEL 311
VVSY ELK+ + +F +L
Sbjct: 602 FVVSYKELKKQIGSAFGDL 620
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 100/142 (70%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+ +T+ + I ++ +D + D+L + L E+ENGRLFRLL +LGTINER E +
Sbjct: 479 ETKTIETFISKISSQVMANMDMMLHQNDALTSNLYSEIENGRLFRLLCRLGTINERQEFD 538
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RYMLKLFRDY+ HQV +G+P +D+ HIV LNKLDAG+ EKICL SRDE
Sbjct: 539 GDRQWSENGERYMLKLFRDYVFHQVDANGQPVVDLGHIVRSLNKLDAGSDEKICLTSRDE 598
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QSV VVSY ELK+ + +F +L
Sbjct: 599 QSVFVVSYKELKKQIGSAFGDL 620
>gi|340519593|gb|EGR49831.1| predicted protein [Trichoderma reesei QM6a]
Length = 648
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 124/194 (63%), Gaps = 2/194 (1%)
Query: 123 LGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD-LMPMI 181
G+ +L + S Q N+ +++ M R+YS ++R+ I +LL+ +D + I
Sbjct: 450 FGRTMLCLAT-STPPQQLTNVSAAMEQMNRTYSPEMRDTITWLLTPPAPHKSIDEFIQGI 508
Query: 182 GARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRY 241
+ D Q D+L +EL +E+ENGR+ RLL+KLGTINER E D WSE G+RY
Sbjct: 509 ATHIVSAFDQSQHRADTLNSELFRELENGRIARLLMKLGTINERQEFENDRAWSENGERY 568
Query: 242 MLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELK 301
MLKLFRDY+ HQV +G P +D+ H++ CLNKLDAG E+ICL SRDEQ+ VVSY ELK
Sbjct: 569 MLKLFRDYVFHQVDSNGNPVIDVGHMLRCLNKLDAGIDERICLTSRDEQTSFVVSYKELK 628
Query: 302 QCLDQSFHELSSSA 315
+ L +F+EL +A
Sbjct: 629 KQLLSAFNELMKAA 642
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 100/144 (69%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
+++ + + I + D Q D+L +EL +E+ENGR+ RLL+KLGTINER E D
Sbjct: 499 KSIDEFIQGIATHIVSAFDQSQHRADTLNSELFRELENGRIARLLMKLGTINERQEFEND 558
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RYMLKLFRDY+ HQV +G P +D+ H++ CLNKLDAG E+ICL SRDEQ+
Sbjct: 559 RAWSENGERYMLKLFRDYVFHQVDSNGNPVIDVGHMLRCLNKLDAGIDERICLTSRDEQT 618
Query: 454 VLVVSYAELKQCLDQSFHELSSSA 477
VVSY ELK+ L +F+EL +A
Sbjct: 619 SFVVSYKELKKQLLSAFNELMKAA 642
>gi|384252549|gb|EIE26025.1| hypothetical protein COCSUDRAFT_61018 [Coccomyxa subellipsoidea
C-169]
Length = 555
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 126/202 (62%), Gaps = 20/202 (9%)
Query: 111 DNYHDLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH 169
+ H LQ +DLTA+G+L+L + C S+D +A +S L I LL+
Sbjct: 355 EELHALQREDLTAVGRLLLVLAC--------AGAPPSLDYVAAGFSQGLTRTISALLASS 406
Query: 170 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
Q G+ + + + + L E+ K E+GRL R+LV+L ++ ERP+ +
Sbjct: 407 Q-----------GSSFASWQQVAAVMSEQLVAEVWKGAEDGRLLRVLVRLSSVLERPDSD 455
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
DP W+ETGDRY+LKLFRD++LHQV+EDG P LD H+V CLNKLDAG EKI LMSRDE
Sbjct: 456 SDPQWAETGDRYLLKLFRDFVLHQVREDGSPMLDWGHVVECLNKLDAGVPEKITLMSRDE 515
Query: 290 QSVLVVSYAELKQCLDQSFHEL 311
S+LVVSYA+LK+CL+ + EL
Sbjct: 516 ASLLVVSYADLKRCLEGALGEL 537
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 96/130 (73%)
Query: 344 GARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRY 403
G+ + + + + L E+ K E+GRL R+LV+L ++ ERP+ + DP W+ETGDRY
Sbjct: 408 GSSFASWQQVAAVMSEQLVAEVWKGAEDGRLLRVLVRLSSVLERPDSDSDPQWAETGDRY 467
Query: 404 MLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELK 463
+LKLFRD++LHQV+EDG P LD H+V CLNKLDAG EKI LMSRDE S+LVVSYA+LK
Sbjct: 468 LLKLFRDFVLHQVREDGSPMLDWGHVVECLNKLDAGVPEKITLMSRDEASLLVVSYADLK 527
Query: 464 QCLDQSFHEL 473
+CL+ + EL
Sbjct: 528 RCLEGALGEL 537
>gi|225561487|gb|EEH09767.1| PAB-dependent poly(A)-specific ribonuclease subunit pan3
[Ajellomyces capsulatus G186AR]
Length = 655
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 115 DLQD-DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ R+Y+ L+N I +LLS QK
Sbjct: 450 DLQSQDLVNFGQLIITLGANSPSVMH--NPTKAMEHFTRAYTPQLKNSIFWLLSALQKDQ 507
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++LS+E+ENGRL RLL KL INERPE +
Sbjct: 508 ERNIDLFVTGISSQLISTFDSALHLDDELTSDLSRELENGRLVRLLTKLNFINERPEYDH 567
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
DP W+E G+RY+LKLFRDY+ HQ+ P +D+ H++ CLNKLDAGT+EK+ L+SRDEQ
Sbjct: 568 DPQWAENGERYVLKLFRDYVFHQIDAQNLPVVDLGHVLTCLNKLDAGTEEKVTLVSRDEQ 627
Query: 291 SVLVVSYAELKQCLDQSFHELS 312
S +VSY ELK+ ++ SF L+
Sbjct: 628 SCFIVSYKELKKAVESSFQALT 649
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 104/153 (67%), Gaps = 3/153 (1%)
Query: 325 LYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
+LLS QK R + + I ++ + D+ D L ++LS+E+ENGRL RLL KL
Sbjct: 497 FWLLSALQKDQERNIDLFVTGISSQLISTFDSALHLDDELTSDLSRELENGRLVRLLTKL 556
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
INERPE + DP W+E G+RY+LKLFRDY+ HQ+ P +D+ H++ CLNKLDAGT+
Sbjct: 557 NFINERPEYDHDPQWAENGERYVLKLFRDYVFHQIDAQNLPVVDLGHVLTCLNKLDAGTE 616
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
EK+ L+SRDEQS +VSY ELK+ ++ SF L+
Sbjct: 617 EKVTLVSRDEQSCFIVSYKELKKAVESSFQALT 649
>gi|325090924|gb|EGC44234.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Ajellomyces capsulatus H88]
Length = 655
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 115 DLQD-DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ R+Y+ L+N I +LLS QK
Sbjct: 450 DLQSQDLVNFGQLIITLGANSPSVMH--NPTKAMEHFTRAYTPQLKNSIFWLLSALQKDQ 507
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++LS+E+ENGRL RLL KL INERPE +
Sbjct: 508 ERNIDLFVTGISSQLISTFDSALHLDDELTSDLSRELENGRLVRLLTKLNFINERPEYDH 567
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
DP W+E G+RY+LKLFRDY+ HQ+ P +D+ H++ CLNKLDAGT+EK+ L+SRDEQ
Sbjct: 568 DPQWAENGERYVLKLFRDYVFHQIDAQNLPVVDLGHVLTCLNKLDAGTEEKVTLVSRDEQ 627
Query: 291 SVLVVSYAELKQCLDQSFHELS 312
S +VSY ELK+ ++ SF L+
Sbjct: 628 SCFIVSYKELKKAVESSFQALT 649
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 104/153 (67%), Gaps = 3/153 (1%)
Query: 325 LYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
+LLS QK R + + I ++ + D+ D L ++LS+E+ENGRL RLL KL
Sbjct: 497 FWLLSALQKDQERNIDLFVTGISSQLISTFDSALHLDDELTSDLSRELENGRLVRLLTKL 556
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
INERPE + DP W+E G+RY+LKLFRDY+ HQ+ P +D+ H++ CLNKLDAGT+
Sbjct: 557 NFINERPEYDHDPQWAENGERYVLKLFRDYVFHQIDAQNLPVVDLGHVLTCLNKLDAGTE 616
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
EK+ L+SRDEQS +VSY ELK+ ++ SF L+
Sbjct: 617 EKVTLVSRDEQSCFIVSYKELKKAVESSFQALT 649
>gi|158563980|sp|Q6MY57.2|PAN3_ASPFU RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
pan3; AltName: Full=PAB1P-dependent poly(A)-nuclease
Length = 662
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 127/205 (61%), Gaps = 6/205 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ R+YS L+N + +LL+ QK
Sbjct: 456 DLQRQDLVNFGQLIVTLGANSPTVMH--NPTKAMEHFTRAYSPQLKNSVFWLLNGMQKDQ 513
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 514 DRNIDVFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMAKLNFVNERPEYEH 573
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT+EKI L+SRDEQ
Sbjct: 574 DRQWSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVITCLNKLDAGTEEKITLISRDEQ 633
Query: 291 SVLVVSYAELKQCLDQSFHELSSSA 315
S +VSY ELK+ L+ SF L A
Sbjct: 634 SCFIVSYKELKKALESSFQALMKPA 658
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 102/156 (65%), Gaps = 3/156 (1%)
Query: 325 LYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
+LL+ QK R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL
Sbjct: 503 FWLLNGMQKDQDRNIDVFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMAKL 562
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
+NERPE D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT+
Sbjct: 563 NFVNERPEYEHDRQWSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVITCLNKLDAGTE 622
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
EKI L+SRDEQS +VSY ELK+ L+ SF L A
Sbjct: 623 EKITLISRDEQSCFIVSYKELKKALESSFQALMKPA 658
>gi|154282729|ref|XP_001542160.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410340|gb|EDN05728.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 547
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 115 DLQD-DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ R+Y+ L+N I +LLS QK
Sbjct: 342 DLQSQDLVNFGQLIITLGANSPSVMH--NPTKAMEHFTRAYTPQLKNSIFWLLSALQKDQ 399
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++LS+E+ENGRL RLL KL INERPE +
Sbjct: 400 ERNIDLFVTGISSQLISTFDSALHLDDELTSDLSRELENGRLVRLLTKLNFINERPEYDH 459
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
DP W+E G+RY+LKLFRDY+ HQ+ P +D+ H++ CLNKLDAGT+EK+ L+SRDEQ
Sbjct: 460 DPQWAENGERYVLKLFRDYVFHQIDAQNIPVVDLGHVLTCLNKLDAGTEEKVTLVSRDEQ 519
Query: 291 SVLVVSYAELKQCLDQSFHELS 312
S +VSY ELK+ ++ SF L+
Sbjct: 520 SCFIVSYKELKKAVESSFQALT 541
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 104/153 (67%), Gaps = 3/153 (1%)
Query: 325 LYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
+LLS QK R + + I ++ + D+ D L ++LS+E+ENGRL RLL KL
Sbjct: 389 FWLLSALQKDQERNIDLFVTGISSQLISTFDSALHLDDELTSDLSRELENGRLVRLLTKL 448
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
INERPE + DP W+E G+RY+LKLFRDY+ HQ+ P +D+ H++ CLNKLDAGT+
Sbjct: 449 NFINERPEYDHDPQWAENGERYVLKLFRDYVFHQIDAQNIPVVDLGHVLTCLNKLDAGTE 508
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
EK+ L+SRDEQS +VSY ELK+ ++ SF L+
Sbjct: 509 EKVTLVSRDEQSCFIVSYKELKKAVESSFQALT 541
>gi|326432188|gb|EGD77758.1| hypothetical protein PTSG_08847 [Salpingoeca sp. ATCC 50818]
Length = 594
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 147 IDLMARSYSADLRNLILYLLS---VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
++ + + YSADL N + YLLS ++++V DLMP+IG+RYY ++D Q LE+EL
Sbjct: 421 LERVKQVYSADLYNTLRYLLSPSPASRRKSVHDLMPLIGSRYYKKIDREQATSAVLESEL 480
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
SKE+ NG LFR++ KL + +RP DP + E G+RYMLKLF+ Y+ HQV ++G P+LD
Sbjct: 481 SKELYNGHLFRIMTKLMMVTDRP--TKDPRFREGGERYMLKLFKHYVFHQVTKEGEPFLD 538
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
++H+V CL KLDA + E++CLMS+D ++++VV+YA+L + L +F EL ++AS
Sbjct: 539 LAHVVQCLAKLDAASPERVCLMSQDGKNIIVVTYADLHRSLHGAFQELVNAAS 591
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/428 (32%), Positives = 218/428 (50%), Gaps = 44/428 (10%)
Query: 60 PHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQ-- 117
PH HK S++ SE++R E+ + SA + P LPLEVDNYH L
Sbjct: 199 PHAAHK-----LRKTDSYFSSEDLRKELLSQRCALEFSAVSD--PNLPLEVDNYHTLMPL 251
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDL 177
+ + + K + A+ + AV E+ QT + LR L+ Y LS + V
Sbjct: 252 EPMVNVSK-VFALPTIAYRAVSSEDGQTHM----------LRRLVGYQLSESEAMNPVRA 300
Query: 178 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSET 237
+ + + AV+ + E S + G F T+ +R L S
Sbjct: 301 WQKVA---HVGIAAVKEAFTTKEFGDSSLVFAGEFFP---NATTLEQR---YLSTVASRP 351
Query: 238 GDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCL--NKLDAGTQEKICLMSRDEQSVLVV 295
D ++L F L ++ L V C+ +K+ ++++ + Q VL
Sbjct: 352 FDEHILWDFTIQLTSAIRAAHASNL----AVRCVRESKVLVTARQRLIVTGVGVQDVLAF 407
Query: 296 SYAELKQCLDQS--FHELSSSASLTPKSTLPLYLLS---VHQKRTVVDLMPMIGARYYTQ 350
A +D++ + S +TL YLLS ++++V DLMP+IG+RYY +
Sbjct: 408 D-ANPPVDMDEAKMLERVKQVYSADLYNTL-RYLLSPSPASRRKSVHDLMPLIGSRYYKK 465
Query: 351 LDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRD 410
+D Q LE+ELSKE+ NG LFR++ KL + +RP DP + E G+RYMLKLF+
Sbjct: 466 IDREQATSAVLESELSKELYNGHLFRIMTKLMMVTDRP--TKDPRFREGGERYMLKLFKH 523
Query: 411 YLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSF 470
Y+ HQV ++G P+LD++H+V CL KLDA + E++CLMS+D ++++VV+YA+L + L +F
Sbjct: 524 YVFHQVTKEGEPFLDLAHVVQCLAKLDAASPERVCLMSQDGKNIIVVTYADLHRSLHGAF 583
Query: 471 HELSSSAS 478
EL ++AS
Sbjct: 584 QELVNAAS 591
>gi|389646275|ref|XP_003720769.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Magnaporthe oryzae 70-15]
gi|121794012|sp|Q2KFH6.1|PAN3_MAGO7 RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|86196665|gb|EAQ71303.1| hypothetical protein MGCH7_ch7g710 [Magnaporthe oryzae 70-15]
gi|351638161|gb|EHA46026.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Magnaporthe oryzae 70-15]
gi|440467484|gb|ELQ36704.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Magnaporthe oryzae Y34]
gi|440483314|gb|ELQ63727.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Magnaporthe oryzae P131]
Length = 680
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 130/198 (65%), Gaps = 5/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ---KRT 173
++D A GKLI+++ + NL +I+ M R++S+ L++++L+LL+ Q ++T
Sbjct: 456 EEDFVAFGKLIVSLATNT--PPTGLNLGKAIEQMGRNHSSTLKDMVLWLLNPPQASGQKT 513
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V +L+ I T DA Q D L +EL +E+ENGR+ RLL+KL TINER E + D
Sbjct: 514 VKNLVAGINEHVMTAFDAQQRQSDMLYSELYREVENGRVLRLLMKLATINERTEYDKDAG 573
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE GDRYMLKLFRDY+ HQV GRP LD H++ CL+KLD GT+E+I L SRD ++
Sbjct: 574 WSENGDRYMLKLFRDYVFHQVDAQGRPVLDPGHMLRCLSKLDVGTEERIKLTSRDCETDF 633
Query: 294 VVSYAELKQCLDQSFHEL 311
+V+Y +LK + +F EL
Sbjct: 634 LVTYKDLKGAVQSAFGEL 651
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 112/173 (64%), Gaps = 4/173 (2%)
Query: 304 LDQSFHELSSSASLTPKSTLPLYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDS 360
L ++ ++ + S T K + L+LL+ Q ++TV +L+ I T DA Q D
Sbjct: 480 LGKAIEQMGRNHSSTLKDMV-LWLLNPPQASGQKTVKNLVAGINEHVMTAFDAQQRQSDM 538
Query: 361 LENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDG 420
L +EL +E+ENGR+ RLL+KL TINER E + D WSE GDRYMLKLFRDY+ HQV G
Sbjct: 539 LYSELYREVENGRVLRLLMKLATINERTEYDKDAGWSENGDRYMLKLFRDYVFHQVDAQG 598
Query: 421 RPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
RP LD H++ CL+KLD GT+E+I L SRD ++ +V+Y +LK + +F EL
Sbjct: 599 RPVLDPGHMLRCLSKLDVGTEERIKLTSRDCETDFLVTYKDLKGAVQSAFGEL 651
>gi|313217651|emb|CBY38699.1| unnamed protein product [Oikopleura dioica]
Length = 517
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 135/201 (67%), Gaps = 12/201 (5%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYL------LSVHQ 170
Q DLT+LG +IL +T +++ + + +D +++ YS DL +LI L + V++
Sbjct: 315 QRDLTSLGYIILCLTSNNIIKGHHDQIGKVLDFVSKKYSKDLHSLISQLVMGGAGMPVNR 374
Query: 171 K-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
+ R + DLMP+IGAR+YT +D + GD +EN+LS +ENGRLFRL+ KLG +++R E
Sbjct: 375 RIRNINDLMPLIGARFYTMVDDALVRGDEIENQLSLTLENGRLFRLICKLG-VSDRGEYG 433
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
ETGDRY+LKLFR+YL HQV +G P++D+ H++ CLNKLD+ + E+ + SRD
Sbjct: 434 ----QYETGDRYLLKLFRNYLYHQVGPNGTPFMDLFHVISCLNKLDSASSERFVMNSRDN 489
Query: 290 QSVLVVSYAELKQCLDQSFHE 310
++VLVVSYA++ L + F E
Sbjct: 490 ENVLVVSYADIHYALQKCFQE 510
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 100/139 (71%), Gaps = 5/139 (3%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
R + DLMP+IGAR+YT +D + GD +EN+LS +ENGRLFRL+ KLG +++R E
Sbjct: 377 RNINDLMPLIGARFYTMVDDALVRGDEIENQLSLTLENGRLFRLICKLG-VSDRGEYG-- 433
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
ETGDRY+LKLFR+YL HQV +G P++D+ H++ CLNKLD+ + E+ + SRD ++
Sbjct: 434 --QYETGDRYLLKLFRNYLYHQVGPNGTPFMDLFHVISCLNKLDSASSERFVMNSRDNEN 491
Query: 454 VLVVSYAELKQCLDQSFHE 472
VLVVSYA++ L + F E
Sbjct: 492 VLVVSYADIHYALQKCFQE 510
>gi|158512688|sp|A1D1Y5.2|PAN3_NEOFI RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
Length = 661
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 126/201 (62%), Gaps = 6/201 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ R+YS L+N + +LL+ QK
Sbjct: 455 DLQRQDLVNFGQLIVTLGANSPTVMH--NPTKAMEHFTRAYSPQLKNSVFWLLNGMQKDQ 512
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 513 DRNIDIFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFVNERPEYEH 572
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT+EKI L+SRDEQ
Sbjct: 573 DRQWSENGERYFLKIFRDYVFHQVDVQGDPVVDLGHVISCLNKLDAGTEEKITLISRDEQ 632
Query: 291 SVLVVSYAELKQCLDQSFHEL 311
S +VSY ELK+ L+ SF L
Sbjct: 633 SCFIVSYKELKKALESSFQAL 653
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 101/152 (66%), Gaps = 3/152 (1%)
Query: 325 LYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
+LL+ QK R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL
Sbjct: 502 FWLLNGMQKDQDRNIDIFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKL 561
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
+NERPE D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT+
Sbjct: 562 NFVNERPEYEHDRQWSENGERYFLKIFRDYVFHQVDVQGDPVVDLGHVISCLNKLDAGTE 621
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
EKI L+SRDEQS +VSY ELK+ L+ SF L
Sbjct: 622 EKITLISRDEQSCFIVSYKELKKALESSFQAL 653
>gi|425770493|gb|EKV08963.1| Poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Penicillium digitatum Pd1]
gi|425771859|gb|EKV10291.1| Poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Penicillium digitatum PHI26]
Length = 556
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + + N +++ RSYS L+N + +LL+ QK
Sbjct: 350 DLQRQDLVNFGQLIVTLGANSPIVIH--NPTKAMEHFTRSYSPQLKNSVFWLLNGQQKDQ 407
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
RT+ + I ++ + D+ D L +L +E+ENGR+ RLL KLG INERPE L
Sbjct: 408 ERTIDTFITGISSQLMSTFDSALHLDDQLNYDLGRELENGRIVRLLSKLGLINERPEYEL 467
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE+G+RY LKLFRDY+ H V G +D+ H++ CLNKLDAG EKI L+SRDEQ
Sbjct: 468 DQRWSESGERYFLKLFRDYVFHSVDSQGEAVVDLGHVLTCLNKLDAGIDEKIHLVSRDEQ 527
Query: 291 SVLVVSYAELKQCLDQSFHELSSSA 315
S +VSY E+K+ L+ SF L A
Sbjct: 528 SSFIVSYKEVKKALESSFQALMKPA 552
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 100/156 (64%), Gaps = 3/156 (1%)
Query: 325 LYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
+LL+ QK RT+ + I ++ + D+ D L +L +E+ENGR+ RLL KL
Sbjct: 397 FWLLNGQQKDQERTIDTFITGISSQLMSTFDSALHLDDQLNYDLGRELENGRIVRLLSKL 456
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
G INERPE LD WSE+G+RY LKLFRDY+ H V G +D+ H++ CLNKLDAG
Sbjct: 457 GLINERPEYELDQRWSESGERYFLKLFRDYVFHSVDSQGEAVVDLGHVLTCLNKLDAGID 516
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
EKI L+SRDEQS +VSY E+K+ L+ SF L A
Sbjct: 517 EKIHLVSRDEQSSFIVSYKEVKKALESSFQALMKPA 552
>gi|119495062|ref|XP_001264325.1| hypothetical protein NFIA_011100 [Neosartorya fischeri NRRL 181]
gi|119412487|gb|EAW22428.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 575
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 127/205 (61%), Gaps = 6/205 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ R+YS L+N + +LL+ QK
Sbjct: 369 DLQRQDLVNFGQLIVTLGANSPTVMH--NPTKAMEHFTRAYSPQLKNSVFWLLNGMQKDQ 426
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 427 DRNIDIFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFVNERPEYEH 486
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT+EKI L+SRDEQ
Sbjct: 487 DRQWSENGERYFLKIFRDYVFHQVDVQGDPVVDLGHVISCLNKLDAGTEEKITLISRDEQ 546
Query: 291 SVLVVSYAELKQCLDQSFHELSSSA 315
S +VSY ELK+ L+ SF L A
Sbjct: 547 SCFIVSYKELKKALESSFQALMKPA 571
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 97/146 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 426 QDRNIDIFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFVNERPEYE 485
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT+EKI L+SRDE
Sbjct: 486 HDRQWSENGERYFLKIFRDYVFHQVDVQGDPVVDLGHVISCLNKLDAGTEEKITLISRDE 545
Query: 452 QSVLVVSYAELKQCLDQSFHELSSSA 477
QS +VSY ELK+ L+ SF L A
Sbjct: 546 QSCFIVSYKELKKALESSFQALMKPA 571
>gi|398406883|ref|XP_003854907.1| hypothetical protein MYCGRDRAFT_37506, partial [Zymoseptoria
tritici IPO323]
gi|339474791|gb|EGP89883.1| hypothetical protein MYCGRDRAFT_37506 [Zymoseptoria tritici IPO323]
Length = 482
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 135/221 (61%), Gaps = 20/221 (9%)
Query: 114 HDLQD-DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKR 172
H+LQ DL LG+LIL + R++ A Q NL +++L++RSYS LR+ I +LL
Sbjct: 260 HELQRADLRDLGRLILGIATRNMSAHQ--NLPKALELVSRSYSERLRSCIAWLLKTTAHS 317
Query: 173 T---VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
T + L+ I + + LD+ D + + L +E+ENGRL RLL KL I ERP+
Sbjct: 318 TEYNINSLLTSIADKVVSTLDSALHQEDDITSNLMQELENGRLVRLLTKLNVILERPDTT 377
Query: 230 LDPT--------------WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLD 275
PT WSETG+RY LKLFRDY+ HQV +GRP LD+ HI+ CLNKLD
Sbjct: 378 STPTASSNPALLNQPSAAWSETGERYYLKLFRDYVFHQVDHEGRPVLDLGHIITCLNKLD 437
Query: 276 AGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
AG EK L+SRDEQS+ + SY E+K+ + ++ E+S +++
Sbjct: 438 AGIDEKFQLVSRDEQSIFITSYKEVKRGFEAAWSEISKASN 478
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 97/157 (61%), Gaps = 14/157 (8%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 395
+ L+ I + + LD+ D + + L +E+ENGRL RLL KL I ERP+ PT
Sbjct: 322 INSLLTSIADKVVSTLDSALHQEDDITSNLMQELENGRLVRLLTKLNVILERPDTTSTPT 381
Query: 396 --------------WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
WSETG+RY LKLFRDY+ HQV +GRP LD+ HI+ CLNKLDAG
Sbjct: 382 ASSNPALLNQPSAAWSETGERYYLKLFRDYVFHQVDHEGRPVLDLGHIITCLNKLDAGID 441
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EK L+SRDEQS+ + SY E+K+ + ++ E+S +++
Sbjct: 442 EKFQLVSRDEQSIFITSYKEVKRGFEAAWSEISKASN 478
>gi|296411625|ref|XP_002835530.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629316|emb|CAZ79687.1| unnamed protein product [Tuber melanosporum]
Length = 522
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
Q+DL LG+L+L++ + A+Q Q S++ + R YS LR+ I YL + K + +
Sbjct: 316 QEDLIQLGRLMLSIAFNTPSAIQYP--QKSMEYIGRHYSIQLRDSIYYLYTGSTK-NIDE 372
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
+ I + + D+ + DSLE+ LS+E+ENGRL RLL K G INERPE + DP WSE
Sbjct: 373 YVKSIANQAFQNFDSALHYEDSLESALSRELENGRLVRLLCKFGFINERPEYDHDPRWSE 432
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 296
TGDRY LKLFRDY+ H V E P +DM+H++ CLNKLDAG EKI L+SRD + VV+
Sbjct: 433 TGDRYYLKLFRDYVFHSVDESNNPVVDMAHVLTCLNKLDAGVDEKIMLVSRDSMNCFVVT 492
Query: 297 YAELK 301
Y E +
Sbjct: 493 YKEAR 497
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 92/139 (66%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+Y L + + + + I + + D+ + DSLE+ LS+E+ENGRL RLL K G I
Sbjct: 359 IYYLYTGSTKNIDEYVKSIANQAFQNFDSALHYEDSLESALSRELENGRLVRLLCKFGFI 418
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERPE + DP WSETGDRY LKLFRDY+ H V E P +DM+H++ CLNKLDAG EKI
Sbjct: 419 NERPEYDHDPRWSETGDRYYLKLFRDYVFHSVDESNNPVVDMAHVLTCLNKLDAGVDEKI 478
Query: 445 CLMSRDEQSVLVVSYAELK 463
L+SRD + VV+Y E +
Sbjct: 479 MLVSRDSMNCFVVTYKEAR 497
>gi|46130648|ref|XP_389104.1| hypothetical protein FG08928.1 [Gibberella zeae PH-1]
Length = 579
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 129/198 (65%), Gaps = 4/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ---KRT 173
Q+D G+L+L +T + + V N Q S++ M+R+YS ++R+ IL+LL+ Q ++
Sbjct: 373 QEDFIQFGRLLLCLTT-NTLPVHLTNYQMSLEQMSRAYSVEIRDTILWLLTPQQPPAQKG 431
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + + I R D D ++ +E+ENGR RL++KL TINERPE D T
Sbjct: 432 IEEFVRGIAGRITFTFDQNLQALDKANTDVMREIENGRAARLMMKLATINERPEFEGDRT 491
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
W+E G+RYMLKLFRDY+ HQV +G+P LDM H++ C+NKLD G+ E+ICL SRDEQ+
Sbjct: 492 WAENGERYMLKLFRDYVFHQVDNNGKPVLDMGHMLRCMNKLDIGSDERICLTSRDEQTSF 551
Query: 294 VVSYAELKQCLDQSFHEL 311
+VSY ELK+ L +F EL
Sbjct: 552 LVSYKELKKMLANTFGEL 569
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 110/170 (64%), Gaps = 4/170 (2%)
Query: 307 SFHELSSSASLTPKSTLPLYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDSLEN 363
S ++S + S+ + T+ L+LL+ Q ++ + + + I R D D
Sbjct: 401 SLEQMSRAYSVEIRDTI-LWLLTPQQPPAQKGIEEFVRGIAGRITFTFDQNLQALDKANT 459
Query: 364 ELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPW 423
++ +E+ENGR RL++KL TINERPE D TW+E G+RYMLKLFRDY+ HQV +G+P
Sbjct: 460 DVMREIENGRAARLMMKLATINERPEFEGDRTWAENGERYMLKLFRDYVFHQVDNNGKPV 519
Query: 424 LDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
LDM H++ C+NKLD G+ E+ICL SRDEQ+ +VSY ELK+ L +F EL
Sbjct: 520 LDMGHMLRCMNKLDIGSDERICLTSRDEQTSFLVSYKELKKMLANTFGEL 569
>gi|261194280|ref|XP_002623545.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Ajellomyces dermatitidis SLH14081]
gi|239588559|gb|EEQ71202.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Ajellomyces dermatitidis SLH14081]
gi|239612790|gb|EEQ89777.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Ajellomyces dermatitidis ER-3]
Length = 655
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 127/197 (64%), Gaps = 5/197 (2%)
Query: 119 DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS---VHQKRTVV 175
DL G+LI+ + S V N +++ +R+Y+ L+N I +LL + Q+R++
Sbjct: 455 DLVNFGQLIVTLGANSPSVVH--NPTKAMEHFSRAYTPQLKNSIFWLLGALQMDQERSID 512
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
+ I ++ + D+ D L ++LS+E+EN RL RLL KL INERPE DP W+
Sbjct: 513 LFVTGISSQLISTFDSALHLDDELTSDLSRELENARLVRLLTKLNFINERPEYEHDPQWA 572
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
E G+RY+LKLFRDY+ HQV P +D++H++ CLNKLDAGT+EK+ L+SRDEQS +V
Sbjct: 573 ENGERYVLKLFRDYVFHQVDAQNAPVVDLAHVLTCLNKLDAGTEEKVTLISRDEQSCFIV 632
Query: 296 SYAELKQCLDQSFHELS 312
SY ELK+ ++ SF L+
Sbjct: 633 SYKELKKAVESSFQALT 649
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 103/150 (68%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
L L + Q+R++ + I ++ + D+ D L ++LS+E+EN RL RLL KL I
Sbjct: 500 LGALQMDQERSIDLFVTGISSQLISTFDSALHLDDELTSDLSRELENARLVRLLTKLNFI 559
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERPE DP W+E G+RY+LKLFRDY+ HQV P +D++H++ CLNKLDAGT+EK+
Sbjct: 560 NERPEYEHDPQWAENGERYVLKLFRDYVFHQVDAQNAPVVDLAHVLTCLNKLDAGTEEKV 619
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
L+SRDEQS +VSY ELK+ ++ SF L+
Sbjct: 620 TLISRDEQSCFIVSYKELKKAVESSFQALT 649
>gi|240274593|gb|EER38109.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Ajellomyces capsulatus H143]
Length = 316
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 115 DLQD-DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ R+Y+ L+N I +LLS QK
Sbjct: 111 DLQSQDLVNFGQLIITLGANSPSVMH--NPTKAMEHFTRAYTPQLKNSIFWLLSALQKDQ 168
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++LS+E+ENGRL RLL KL INERPE +
Sbjct: 169 ERNIDLFVTGISSQLISTFDSALHLDDELTSDLSRELENGRLVRLLTKLNFINERPEYDH 228
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
DP W+E G+RY+LKLFRDY+ HQ+ P +D+ H++ CLNKLDAGT+EK+ L+SRDEQ
Sbjct: 229 DPQWAENGERYVLKLFRDYVFHQIDAQNLPVVDLGHVLTCLNKLDAGTEEKVTLVSRDEQ 288
Query: 291 SVLVVSYAELKQCLDQSFHELS 312
S +VSY ELK+ ++ SF L+
Sbjct: 289 SCFIVSYKELKKAVESSFQALT 310
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 104/153 (67%), Gaps = 3/153 (1%)
Query: 325 LYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
+LLS QK R + + I ++ + D+ D L ++LS+E+ENGRL RLL KL
Sbjct: 158 FWLLSALQKDQERNIDLFVTGISSQLISTFDSALHLDDELTSDLSRELENGRLVRLLTKL 217
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
INERPE + DP W+E G+RY+LKLFRDY+ HQ+ P +D+ H++ CLNKLDAGT+
Sbjct: 218 NFINERPEYDHDPQWAENGERYVLKLFRDYVFHQIDAQNLPVVDLGHVLTCLNKLDAGTE 277
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
EK+ L+SRDEQS +VSY ELK+ ++ SF L+
Sbjct: 278 EKVTLVSRDEQSCFIVSYKELKKAVESSFQALT 310
>gi|44890028|emb|CAF32146.1| hypothetical protein, conserved [Aspergillus fumigatus]
Length = 517
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 127/205 (61%), Gaps = 6/205 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ R+YS L+N + +LL+ QK
Sbjct: 311 DLQRQDLVNFGQLIVTLGANSPTVMH--NPTKAMEHFTRAYSPQLKNSVFWLLNGMQKDQ 368
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 369 DRNIDVFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMAKLNFVNERPEYEH 428
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT+EKI L+SRDEQ
Sbjct: 429 DRQWSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVITCLNKLDAGTEEKITLISRDEQ 488
Query: 291 SVLVVSYAELKQCLDQSFHELSSSA 315
S +VSY ELK+ L+ SF L A
Sbjct: 489 SCFIVSYKELKKALESSFQALMKPA 513
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 97/146 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 368 QDRNIDVFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMAKLNFVNERPEYE 427
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT+EKI L+SRDE
Sbjct: 428 HDRQWSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVITCLNKLDAGTEEKITLISRDE 487
Query: 452 QSVLVVSYAELKQCLDQSFHELSSSA 477
QS +VSY ELK+ L+ SF L A
Sbjct: 488 QSCFIVSYKELKKALESSFQALMKPA 513
>gi|313240061|emb|CBY32416.1| unnamed protein product [Oikopleura dioica]
Length = 623
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 133/197 (67%), Gaps = 12/197 (6%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYL------LSVHQ 170
Q DLT+LG +IL +T +++ + + +D +++ YS DL +LI L + V++
Sbjct: 422 QRDLTSLGYIILCLTSNNIIKGHHDQIGKVLDFVSKKYSKDLHSLISQLVMGGAGMPVNR 481
Query: 171 K-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
+ R + DLMP+IGAR+YT +D + GD +EN+LS +ENGRLFRL+ KLG +++R E
Sbjct: 482 RIRNINDLMPLIGARFYTMVDDALVRGDEIENQLSLTLENGRLFRLICKLG-VSDRGEYG 540
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
ETGDRY+LKLFR+YL HQV +G P++D+ H++ CLNKLD+ + E+ + SRD
Sbjct: 541 ----QYETGDRYLLKLFRNYLYHQVGPNGTPFMDLFHVISCLNKLDSASSERFVMNSRDN 596
Query: 290 QSVLVVSYAELKQCLDQ 306
++VLVVSYA++ L +
Sbjct: 597 ENVLVVSYADIHYALQK 613
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 5/135 (3%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
R + DLMP+IGAR+YT +D + GD +EN+LS +ENGRLFRL+ KLG +++R E
Sbjct: 484 RNINDLMPLIGARFYTMVDDALVRGDEIENQLSLTLENGRLFRLICKLG-VSDRGEYG-- 540
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
ETGDRY+LKLFR+YL HQV +G P++D+ H++ CLNKLD+ + E+ + SRD ++
Sbjct: 541 --QYETGDRYLLKLFRNYLYHQVGPNGTPFMDLFHVISCLNKLDSASSERFVMNSRDNEN 598
Query: 454 VLVVSYAELKQCLDQ 468
VLVVSYA++ L +
Sbjct: 599 VLVVSYADIHYALQK 613
>gi|327351952|gb|EGE80809.1| Pabp1-dependent poly(A)-specific ribonuclease subunit pan3
[Ajellomyces dermatitidis ATCC 18188]
Length = 801
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 127/197 (64%), Gaps = 5/197 (2%)
Query: 119 DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS---VHQKRTVV 175
DL G+LI+ + S V N +++ +R+Y+ L+N I +LL + Q+R++
Sbjct: 601 DLVNFGQLIVTLGANSPSVVH--NPTKAMEHFSRAYTPQLKNSIFWLLGALQMDQERSID 658
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
+ I ++ + D+ D L ++LS+E+EN RL RLL KL INERPE DP W+
Sbjct: 659 LFVTGISSQLISTFDSALHLDDELTSDLSRELENARLVRLLTKLNFINERPEYEHDPQWA 718
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
E G+RY+LKLFRDY+ HQV P +D++H++ CLNKLDAGT+EK+ L+SRDEQS +V
Sbjct: 719 ENGERYVLKLFRDYVFHQVDAQNAPVVDLAHVLTCLNKLDAGTEEKVTLISRDEQSCFIV 778
Query: 296 SYAELKQCLDQSFHELS 312
SY ELK+ ++ SF L+
Sbjct: 779 SYKELKKAVESSFQALT 795
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 103/150 (68%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
L L + Q+R++ + I ++ + D+ D L ++LS+E+EN RL RLL KL I
Sbjct: 646 LGALQMDQERSIDLFVTGISSQLISTFDSALHLDDELTSDLSRELENARLVRLLTKLNFI 705
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERPE DP W+E G+RY+LKLFRDY+ HQV P +D++H++ CLNKLDAGT+EK+
Sbjct: 706 NERPEYEHDPQWAENGERYVLKLFRDYVFHQVDAQNAPVVDLAHVLTCLNKLDAGTEEKV 765
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
L+SRDEQS +VSY ELK+ ++ SF L+
Sbjct: 766 TLISRDEQSCFIVSYKELKKAVESSFQALT 795
>gi|313233488|emb|CBY09660.1| unnamed protein product [Oikopleura dioica]
Length = 597
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 133/197 (67%), Gaps = 12/197 (6%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYL------LSVHQ 170
Q DLT+LG +IL +T +++ + + +D +++ YS DL +LI L + V++
Sbjct: 396 QRDLTSLGYIILCLTSNNIIKGHHDQIGKVLDFVSKKYSKDLHSLISQLVMGGAGMPVNR 455
Query: 171 K-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
+ R + DLMP+IGAR+YT +D + GD +EN+LS +ENGRLFRL+ KLG +++R E
Sbjct: 456 RIRNINDLMPLIGARFYTMVDDALVRGDEIENQLSLTLENGRLFRLICKLG-VSDRGEYG 514
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
ETGDRY+LKLFR+YL HQV +G P++D+ H++ CLNKLD+ + E+ + SRD
Sbjct: 515 ----QYETGDRYLLKLFRNYLYHQVGPNGTPFMDLFHVISCLNKLDSASSERFVMNSRDN 570
Query: 290 QSVLVVSYAELKQCLDQ 306
++VLVVSYA++ L +
Sbjct: 571 ENVLVVSYADIHYALQK 587
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 5/135 (3%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
R + DLMP+IGAR+YT +D + GD +EN+LS +ENGRLFRL+ KLG +++R E
Sbjct: 458 RNINDLMPLIGARFYTMVDDALVRGDEIENQLSLTLENGRLFRLICKLG-VSDRGEYG-- 514
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
ETGDRY+LKLFR+YL HQV +G P++D+ H++ CLNKLD+ + E+ + SRD ++
Sbjct: 515 --QYETGDRYLLKLFRNYLYHQVGPNGTPFMDLFHVISCLNKLDSASSERFVMNSRDNEN 572
Query: 454 VLVVSYAELKQCLDQ 468
VLVVSYA++ L +
Sbjct: 573 VLVVSYADIHYALQK 587
>gi|408391560|gb|EKJ70934.1| hypothetical protein FPSE_08902 [Fusarium pseudograminearum CS3096]
Length = 583
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 128/198 (64%), Gaps = 4/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ---KRT 173
Q+D G+L+L +T + + V N Q S++ M+R+YS ++R+ IL+LL+ Q ++
Sbjct: 377 QEDFIQFGRLLLCLTT-NTLPVHLTNYQVSLEQMSRAYSVEIRDTILWLLTPQQPPAQKG 435
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + + I R D D ++ +E+ENGR RL++KL TINERPE D
Sbjct: 436 IEEFVRGIAGRITFTFDQNLQALDKANTDVMREIENGRAARLMMKLATINERPEFEGDRA 495
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
W+E G+RYMLKLFRDY+ HQV +G+P LDM H++ C+NKLD G+ E+ICL SRDEQ+
Sbjct: 496 WAENGERYMLKLFRDYVFHQVDNNGKPVLDMGHMLRCMNKLDIGSDERICLTSRDEQTSF 555
Query: 294 VVSYAELKQCLDQSFHEL 311
+VSY ELK+ L +F EL
Sbjct: 556 LVSYKELKKMLANTFGEL 573
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 109/170 (64%), Gaps = 4/170 (2%)
Query: 307 SFHELSSSASLTPKSTLPLYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDSLEN 363
S ++S + S+ + T+ L+LL+ Q ++ + + + I R D D
Sbjct: 405 SLEQMSRAYSVEIRDTI-LWLLTPQQPPAQKGIEEFVRGIAGRITFTFDQNLQALDKANT 463
Query: 364 ELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPW 423
++ +E+ENGR RL++KL TINERPE D W+E G+RYMLKLFRDY+ HQV +G+P
Sbjct: 464 DVMREIENGRAARLMMKLATINERPEFEGDRAWAENGERYMLKLFRDYVFHQVDNNGKPV 523
Query: 424 LDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
LDM H++ C+NKLD G+ E+ICL SRDEQ+ +VSY ELK+ L +F EL
Sbjct: 524 LDMGHMLRCMNKLDIGSDERICLTSRDEQTSFLVSYKELKKMLANTFGEL 573
>gi|406861448|gb|EKD14502.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 813
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 127/199 (63%), Gaps = 4/199 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQREN-LQTSIDLMARSYSADLRNLILYLLSVHQKRTVV 175
Q+D G+LILA+ S V L+ +++ + R+YS + R+ + +LL+
Sbjct: 607 QEDFILFGRLILAIATNSSNLVSSNTPLKGAMESLKRNYSPEFRDTVEWLLTPAVAPGTK 666
Query: 176 DL---MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
DL + I + D D+ + LS+E+ENGRLFRL+ KLGTINERPE D
Sbjct: 667 DLNEFIRGISGQILASYDNALHSEDTTLSTLSQELENGRLFRLVAKLGTINERPEYEGDV 726
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
WSE G+RY+LKLFRDY+ HQV ++G+P +D+ H++ CLNKLDAG+ EKI L+SRD+Q
Sbjct: 727 KWSEVGERYILKLFRDYVFHQVNQEGKPVVDLGHMLECLNKLDAGSAEKIKLVSRDDQDC 786
Query: 293 LVVSYAELKQCLDQSFHEL 311
++V Y ELK+ +D +F EL
Sbjct: 787 MIVGYKELKKQVDAAFGEL 805
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 91/115 (79%)
Query: 359 DSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQE 418
D+ + LS+E+ENGRLFRL+ KLGTINERPE D WSE G+RY+LKLFRDY+ HQV +
Sbjct: 691 DTTLSTLSQELENGRLFRLVAKLGTINERPEYEGDVKWSEVGERYILKLFRDYVFHQVNQ 750
Query: 419 DGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
+G+P +D+ H++ CLNKLDAG+ EKI L+SRD+Q ++V Y ELK+ +D +F EL
Sbjct: 751 EGKPVVDLGHMLECLNKLDAGSAEKIKLVSRDDQDCMIVGYKELKKQVDAAFGEL 805
>gi|302919229|ref|XP_003052818.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733758|gb|EEU47105.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 579
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 135/202 (66%), Gaps = 4/202 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ---KRT 173
Q+D G+L+L +T S + + NL+ S++ M+R+YS ++R+ IL+LL+ Q ++
Sbjct: 372 QEDFIQFGRLLLCLTT-STLPIHLTNLKISMEQMSRTYSVEMRDTILWLLTPQQPPAQKG 430
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + + I R + D D + ++ +E+ENGR+ RL++KL TINER E N D
Sbjct: 431 IDEFVRGIAGRITSTFDMNLQALDKVNADVMREVENGRVARLMMKLATINERYEFNGDQN 490
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RY+LKLFRDY+ HQV +G P LDM H++ CL+KL+ GT+E+ICL SRDEQ+
Sbjct: 491 WSENGERYILKLFRDYVFHQVDSNGNPVLDMGHMLRCLSKLEVGTEERICLTSRDEQTSF 550
Query: 294 VVSYAELKQCLDQSFHELSSSA 315
+VSY ELK+ L SF EL+ ++
Sbjct: 551 LVSYRELKKMLTTSFGELAKAS 572
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 116/177 (65%), Gaps = 4/177 (2%)
Query: 304 LDQSFHELSSSASLTPKSTLPLYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDS 360
L S ++S + S+ + T+ L+LL+ Q ++ + + + I R + D D
Sbjct: 397 LKISMEQMSRTYSVEMRDTI-LWLLTPQQPPAQKGIDEFVRGIAGRITSTFDMNLQALDK 455
Query: 361 LENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDG 420
+ ++ +E+ENGR+ RL++KL TINER E N D WSE G+RY+LKLFRDY+ HQV +G
Sbjct: 456 VNADVMREVENGRVARLMMKLATINERYEFNGDQNWSENGERYILKLFRDYVFHQVDSNG 515
Query: 421 RPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
P LDM H++ CL+KL+ GT+E+ICL SRDEQ+ +VSY ELK+ L SF EL+ ++
Sbjct: 516 NPVLDMGHMLRCLSKLEVGTEERICLTSRDEQTSFLVSYRELKKMLTTSFGELAKAS 572
>gi|158564105|sp|Q0D0A1.2|PAN3_ASPTN RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
pan3; AltName: Full=PAB1P-dependent poly(A)-nuclease
Length = 653
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 126/201 (62%), Gaps = 6/201 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL + G+LI+ + S + N +++ R+YS ++N + +LL+ QK
Sbjct: 447 DLQHQDLVSFGQLIVTLGANSPSVMH--NPTKAMEHFTRAYSPQMKNSVFWLLNSMQKDQ 504
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
T+ + I ++ + D+ D L ++LS+E+ENGRL RL+ KL INERPE
Sbjct: 505 DHTIDIFITGISSQLMSTFDSALHMDDQLTSDLSRELENGRLVRLMTKLNFINERPEYEH 564
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAG+ EKI L+SRDEQ
Sbjct: 565 DRQWSENGERYFLKIFRDYVFHQVDAHGDPVVDLGHVLACLNKLDAGSDEKITLVSRDEQ 624
Query: 291 SVLVVSYAELKQCLDQSFHEL 311
S +VSY E+K+ L+ SF L
Sbjct: 625 SCFIVSYKEIKKALESSFQAL 645
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 100/152 (65%), Gaps = 3/152 (1%)
Query: 325 LYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
+LL+ QK T+ + I ++ + D+ D L ++LS+E+ENGRL RL+ KL
Sbjct: 494 FWLLNSMQKDQDHTIDIFITGISSQLMSTFDSALHMDDQLTSDLSRELENGRLVRLMTKL 553
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
INERPE D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAG+
Sbjct: 554 NFINERPEYEHDRQWSENGERYFLKIFRDYVFHQVDAHGDPVVDLGHVLACLNKLDAGSD 613
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
EKI L+SRDEQS +VSY E+K+ L+ SF L
Sbjct: 614 EKITLVSRDEQSCFIVSYKEIKKALESSFQAL 645
>gi|378730774|gb|EHY57233.1| poly(A)-specific ribonuclease [Exophiala dermatitidis NIH/UT8656]
Length = 640
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 126/197 (63%), Gaps = 4/197 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV--HQKRTV 174
+ DL G +IL++ + A N S+DL R + +L+N +++L S +Q++T+
Sbjct: 438 RQDLVNFGLVILSVGSGTGDA--GANFARSMDLFKRFFKPELQNAVVWLYSAMQNQEKTI 495
Query: 175 VDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
+ MI + T +A D+L +EL++E+EN RL RL+ KL INERPE D W
Sbjct: 496 DQFITMISNQMITAFNAALHTDDALYSELAREVENARLVRLMAKLNFINERPEYEHDRAW 555
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
+E G+RY L+LFRDY+ HQV RP +D+ H++ CLNKLDAGT E+I L+SRDEQS +
Sbjct: 556 AENGERYYLQLFRDYVFHQVDAQNRPVVDLGHVITCLNKLDAGTDERITLISRDEQSCFI 615
Query: 295 VSYAELKQCLDQSFHEL 311
VSY ELK+ ++ +F +L
Sbjct: 616 VSYRELKKGVESAFQDL 632
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 101/149 (67%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
LY +Q++T+ + MI + T +A D+L +EL++E+EN RL RL+ KL I
Sbjct: 484 LYSAMQNQEKTIDQFITMISNQMITAFNAALHTDDALYSELAREVENARLVRLMAKLNFI 543
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERPE D W+E G+RY L+LFRDY+ HQV RP +D+ H++ CLNKLDAGT E+I
Sbjct: 544 NERPEYEHDRAWAENGERYYLQLFRDYVFHQVDAQNRPVVDLGHVITCLNKLDAGTDERI 603
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
L+SRDEQS +VSY ELK+ ++ +F +L
Sbjct: 604 TLISRDEQSCFIVSYRELKKGVESAFQDL 632
>gi|209882843|ref|XP_002142857.1| PAB-dependent poly(A)-specific ribonuclease subunit 3
[Cryptosporidium muris RN66]
gi|209558463|gb|EEA08508.1| PAB-dependent poly(A)-specific ribonuclease subunit 3, putative
[Cryptosporidium muris RN66]
Length = 686
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 127/205 (61%), Gaps = 5/205 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQT-SIDLMARSYSADLRNLILYLLS---VHQKR 172
+ DL ALG +ILA+ C SL + N I L SYS DL+ L+L LLS +H+
Sbjct: 476 KQDLVALGYIILALCCGSLTIINDLNHAVEQIFLKCSSYSNDLKKLVLILLSKPALHKNN 535
Query: 173 -TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 231
V L M+ AR Q++ D+LENE KE++NGRLFRLL K+ TI +R +LN
Sbjct: 536 LDVFILANMLAARMIPQIEHSLKLTDALENEFKKEIDNGRLFRLLTKINTIADRNQLNSI 595
Query: 232 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 291
W+ETGDRY KLFR+YL Q GRP +DM HI L K+D GT E + LMS D S
Sbjct: 596 HKWNETGDRYTCKLFREYLFQQTDSQGRPIIDMGHIFDALAKVDIGTSETVTLMSSDGSS 655
Query: 292 VLVVSYAELKQCLDQSFHELSSSAS 316
+L+VS+A++K +D+SF E+ ++A+
Sbjct: 656 ILLVSFADIKNSIDKSFCEIVAAAT 680
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 114/184 (61%), Gaps = 6/184 (3%)
Query: 299 ELKQCLDQSFHELSSSASLTPKSTLPLYLLS---VHQKR-TVVDLMPMIGARYYTQLDAV 354
+L ++Q F + SS ++ K L L LLS +H+ V L M+ AR Q++
Sbjct: 499 DLNHAVEQIFLKCSSYSNDLKK--LVLILLSKPALHKNNLDVFILANMLAARMIPQIEHS 556
Query: 355 QLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLH 414
D+LENE KE++NGRLFRLL K+ TI +R +LN W+ETGDRY KLFR+YL
Sbjct: 557 LKLTDALENEFKKEIDNGRLFRLLTKINTIADRNQLNSIHKWNETGDRYTCKLFREYLFQ 616
Query: 415 QVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
Q GRP +DM HI L K+D GT E + LMS D S+L+VS+A++K +D+SF E+
Sbjct: 617 QTDSQGRPIIDMGHIFDALAKVDIGTSETVTLMSSDGSSILLVSFADIKNSIDKSFCEIV 676
Query: 475 SSAS 478
++A+
Sbjct: 677 AAAT 680
>gi|70996092|ref|XP_752801.1| poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Aspergillus fumigatus Af293]
gi|66850436|gb|EAL90763.1| poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Aspergillus fumigatus Af293]
gi|159131555|gb|EDP56668.1| poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Aspergillus fumigatus A1163]
Length = 466
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 127/205 (61%), Gaps = 6/205 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ R+YS L+N + +LL+ QK
Sbjct: 260 DLQRQDLVNFGQLIVTLGANSPTVMH--NPTKAMEHFTRAYSPQLKNSVFWLLNGMQKDQ 317
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 318 DRNIDVFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMAKLNFVNERPEYEH 377
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT+EKI L+SRDEQ
Sbjct: 378 DRQWSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVITCLNKLDAGTEEKITLISRDEQ 437
Query: 291 SVLVVSYAELKQCLDQSFHELSSSA 315
S +VSY ELK+ L+ SF L A
Sbjct: 438 SCFIVSYKELKKALESSFQALMKPA 462
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 97/146 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 317 QDRNIDVFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMAKLNFVNERPEYE 376
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT+EKI L+SRDE
Sbjct: 377 HDRQWSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVITCLNKLDAGTEEKITLISRDE 436
Query: 452 QSVLVVSYAELKQCLDQSFHELSSSA 477
QS +VSY ELK+ L+ SF L A
Sbjct: 437 QSCFIVSYKELKKALESSFQALMKPA 462
>gi|402084866|gb|EJT79884.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 658
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 144/248 (58%), Gaps = 15/248 (6%)
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVS-ANPELFPELPLEVDNYHDLQDDLTALGKLI 127
A VD S ++E R + L +V+ P+ EL Q+D A GK+I
Sbjct: 405 ARCVDLSKIILTEKNRIRLSACGILDVVNFETPKPLAEL---------QQEDFVAFGKVI 455
Query: 128 LAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ---KRTVVDLMPMIGAR 184
+++ +L NL T+++ M R++S L+ +L+LL+ Q ++V +L+ I
Sbjct: 456 VSLATHTLPISL--NLATAVEQMGRNHSMALKETVLWLLNPPQAGASKSVDNLLTGINHH 513
Query: 185 YYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLK 244
T D Q D+L +EL +E+ENGR RL++KLG +NER E DP WSE GDRYM+K
Sbjct: 514 LATAFDQKQRQSDALYSELYREVENGRAARLMLKLGVVNERLEFEGDPRWSENGDRYMIK 573
Query: 245 LFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCL 304
LFRD++ HQV G+P LDM H++ CL KLDAG E+I L SRD + +VSY +L + +
Sbjct: 574 LFRDFVFHQVDAQGQPVLDMGHMLRCLAKLDAGVDERIRLTSRDSDTDFIVSYKDLGRAI 633
Query: 305 DQSFHELS 312
+ +F +L+
Sbjct: 634 NSAFSDLA 641
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 110/174 (63%), Gaps = 4/174 (2%)
Query: 304 LDQSFHELSSSASLTPKSTLPLYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDS 360
L + ++ + S+ K T+ L+LL+ Q ++V +L+ I T D Q D+
Sbjct: 469 LATAVEQMGRNHSMALKETV-LWLLNPPQAGASKSVDNLLTGINHHLATAFDQKQRQSDA 527
Query: 361 LENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDG 420
L +EL +E+ENGR RL++KLG +NER E DP WSE GDRYM+KLFRD++ HQV G
Sbjct: 528 LYSELYREVENGRAARLMLKLGVVNERLEFEGDPRWSENGDRYMIKLFRDFVFHQVDAQG 587
Query: 421 RPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+P LDM H++ CL KLDAG E+I L SRD + +VSY +L + ++ +F +L+
Sbjct: 588 QPVLDMGHMLRCLAKLDAGVDERIRLTSRDSDTDFIVSYKDLGRAINSAFSDLA 641
>gi|313212548|emb|CBY36510.1| unnamed protein product [Oikopleura dioica]
Length = 542
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 139/222 (62%), Gaps = 9/222 (4%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQR--ENLQTSIDLMARSYSADLRNLILYLLSVHQKRTV 174
QDDL LG+L+LA+ C S Q + + +L+ +S+SADL LI YLL
Sbjct: 309 QDDLFHLGRLLLALCCNSTQPFQGDVQVINQCAELVRKSFSADLFKLISYLLKPSSTGKS 368
Query: 175 VD-LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPE----LN 229
VD LMPMIGAR+YTQ D+ L GD +E EL KE+ENGRLFRL+ K+ + +P L
Sbjct: 369 VDALMPMIGARFYTQFDSSLLWGDMIEGELEKELENGRLFRLISKMSMVQCQPPAGAVLG 428
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
+ +WSE+G+R +++LFR+YL Q + G P+L +SH++ LNKLD G+ EKI L S D+
Sbjct: 429 QEQSWSESGERRLVRLFRNYLFRQRTDQGNPFLSISHVISSLNKLDVGSDEKIILNSNDD 488
Query: 290 QSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVH 331
++V++ +Y ++K +++ L + + +P S P ++H
Sbjct: 489 RTVILATYNDIKSAINKPLACLFN--NFSPWSAKPETASNIH 528
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 100/148 (67%), Gaps = 5/148 (3%)
Query: 326 YLLSVHQKRTVVD-LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
YLL VD LMPMIGAR+YTQ D+ L GD +E EL KE+ENGRLFRL+ K+ +
Sbjct: 358 YLLKPSSTGKSVDALMPMIGARFYTQFDSSLLWGDMIEGELEKELENGRLFRLISKMSMV 417
Query: 385 NERPE----LNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
+P L + +WSE+G+R +++LFR+YL Q + G P+L +SH++ LNKLD G+
Sbjct: 418 QCQPPAGAVLGQEQSWSESGERRLVRLFRNYLFRQRTDQGNPFLSISHVISSLNKLDVGS 477
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQ 468
EKI L S D+++V++ +Y ++K +++
Sbjct: 478 DEKIILNSNDDRTVILATYNDIKSAINK 505
>gi|317025708|ref|XP_001389642.2| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Aspergillus niger CBS 513.88]
Length = 642
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---RT 173
+ DL G+LI+ + + N +++ R+Y+A L+N + +LL+ QK R
Sbjct: 437 RQDLVNFGQLIVTLGANQPNVMH--NPTKAMEHFTRAYTAQLKNSVFWLLNGLQKDQERN 494
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + I + + D+ D L ++LS+E+ENGRL RL+ KL +NERPE D
Sbjct: 495 IDIFITGISSTLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFVNERPEYEHDRQ 554
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDEQS
Sbjct: 555 WSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVLMCLNKLDAGTDEKITLISRDEQSCF 614
Query: 294 VVSYAELKQCLDQSFHEL 311
VVSY ELK+ L+ SF L
Sbjct: 615 VVSYKELKKALESSFQAL 632
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+R + + I + + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 491 QERNIDIFITGISSTLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFVNERPEYE 550
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDE
Sbjct: 551 HDRQWSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVLMCLNKLDAGTDEKITLISRDE 610
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ELK+ L+ SF L
Sbjct: 611 QSCFVVSYKELKKALESSFQAL 632
>gi|134055762|emb|CAK37287.1| unnamed protein product [Aspergillus niger]
Length = 612
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---RT 173
+ DL G+LI+ + + N +++ R+Y+A L+N + +LL+ QK R
Sbjct: 407 RQDLVNFGQLIVTLGANQPNVMH--NPTKAMEHFTRAYTAQLKNSVFWLLNGLQKDQERN 464
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + I + + D+ D L ++LS+E+ENGRL RL+ KL +NERPE D
Sbjct: 465 IDIFITGISSTLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFVNERPEYEHDRQ 524
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDEQS
Sbjct: 525 WSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVLMCLNKLDAGTDEKITLISRDEQSCF 584
Query: 294 VVSYAELKQCLDQSFHEL 311
VVSY ELK+ L+ SF L
Sbjct: 585 VVSYKELKKALESSFQAL 602
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+R + + I + + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 461 QERNIDIFITGISSTLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFVNERPEYE 520
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDE
Sbjct: 521 HDRQWSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVLMCLNKLDAGTDEKITLISRDE 580
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ELK+ L+ SF L
Sbjct: 581 QSCFVVSYKELKKALESSFQAL 602
>gi|358370070|dbj|GAA86682.1| PAB-dependent poly(A)-specific ribonuclease subunit pan3
[Aspergillus kawachii IFO 4308]
Length = 554
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---RT 173
+ DL G+LI+ + + N +++ R+Y+A L+N + +LL+ QK R
Sbjct: 349 RQDLVNFGQLIVTLGANQPNVMH--NPTKAMEHFTRAYTAQLKNSVFWLLNGLQKDQERN 406
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + I + + D+ D L ++LS+E+ENGRL RL+ KL INERPE D
Sbjct: 407 IDIFITGISSTLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFINERPEYEHDRQ 466
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDEQS
Sbjct: 467 WSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVLMCLNKLDAGTDEKITLISRDEQSCF 526
Query: 294 VVSYAELKQCLDQSFHEL 311
VVSY ELK+ L+ SF L
Sbjct: 527 VVSYKELKKALESSFQAL 544
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+R + + I + + D+ D L ++LS+E+ENGRL RL+ KL INERPE
Sbjct: 403 QERNIDIFITGISSTLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFINERPEYE 462
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDE
Sbjct: 463 HDRQWSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVLMCLNKLDAGTDEKITLISRDE 522
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ELK+ L+ SF L
Sbjct: 523 QSCFVVSYKELKKALESSFQAL 544
>gi|442570257|sp|Q1E2S2.3|PAN3_COCIM RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|392870408|gb|EAS32206.2| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Coccidioides immitis RS]
Length = 657
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 124/203 (61%), Gaps = 10/203 (4%)
Query: 115 DLQ-DDLTALGKLILAMTCRS--LMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK 171
DLQ DL G+LIL + S LM N + + RSYSA L N + +LLS QK
Sbjct: 452 DLQHQDLVNFGQLILTLGANSPSLM----HNPTKATEHFNRSYSAQLNNSVYWLLSGMQK 507
Query: 172 ---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL 228
RT+ + I ++ + D+ D L ++LS+E+EN RL RLL KL INERPE
Sbjct: 508 DQERTIDIFISGISSQLMSTFDSSLHLDDQLISDLSRELENARLVRLLTKLNFINERPEY 567
Query: 229 NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD 288
D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAGT EK+ L+SRD
Sbjct: 568 EHDRQWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGTDEKVTLISRD 627
Query: 289 EQSVLVVSYAELKQCLDQSFHEL 311
EQS +VSY ELK+ ++ SF L
Sbjct: 628 EQSCFIVSYKELKKAVEASFQAL 650
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+RT+ + I ++ + D+ D L ++LS+E+EN RL RLL KL INERPE
Sbjct: 509 QERTIDIFISGISSQLMSTFDSSLHLDDQLISDLSRELENARLVRLLTKLNFINERPEYE 568
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAGT EK+ L+SRDE
Sbjct: 569 HDRQWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGTDEKVTLISRDE 628
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS +VSY ELK+ ++ SF L
Sbjct: 629 QSCFIVSYKELKKAVEASFQAL 650
>gi|119186187|ref|XP_001243700.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 599
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 124/203 (61%), Gaps = 10/203 (4%)
Query: 115 DLQ-DDLTALGKLILAMTCRS--LMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK 171
DLQ DL G+LIL + S LM N + + RSYSA L N + +LLS QK
Sbjct: 394 DLQHQDLVNFGQLILTLGANSPSLM----HNPTKATEHFNRSYSAQLNNSVYWLLSGMQK 449
Query: 172 ---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL 228
RT+ + I ++ + D+ D L ++LS+E+EN RL RLL KL INERPE
Sbjct: 450 DQERTIDIFISGISSQLMSTFDSSLHLDDQLISDLSRELENARLVRLLTKLNFINERPEY 509
Query: 229 NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD 288
D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAGT EK+ L+SRD
Sbjct: 510 EHDRQWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGTDEKVTLISRD 569
Query: 289 EQSVLVVSYAELKQCLDQSFHEL 311
EQS +VSY ELK+ ++ SF L
Sbjct: 570 EQSCFIVSYKELKKAVEASFQAL 592
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+RT+ + I ++ + D+ D L ++LS+E+EN RL RLL KL INERPE
Sbjct: 451 QERTIDIFISGISSQLMSTFDSSLHLDDQLISDLSRELENARLVRLLTKLNFINERPEYE 510
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAGT EK+ L+SRDE
Sbjct: 511 HDRQWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGTDEKVTLISRDE 570
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS +VSY ELK+ ++ SF L
Sbjct: 571 QSCFIVSYKELKKAVEASFQAL 592
>gi|350638641|gb|EHA26997.1| hypothetical protein ASPNIDRAFT_130872 [Aspergillus niger ATCC
1015]
Length = 613
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---RT 173
+ DL G+LI+ + + N +++ R+Y+A L+N + +LL+ QK R
Sbjct: 414 RQDLVNFGQLIVTLGANQPNVMH--NPTKAMEHFTRAYTAQLKNSVFWLLNGLQKDQERN 471
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + I + + D+ D L ++LS+E+ENGRL RL+ KL +NERPE D
Sbjct: 472 IDIFITGISSTLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFVNERPEYEHDRQ 531
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDEQS
Sbjct: 532 WSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVLMCLNKLDAGTDEKITLISRDEQSCF 591
Query: 294 VVSYAELKQCLDQSFHEL 311
VVSY ELK+ L+ SF L
Sbjct: 592 VVSYKELKKALESSFQAL 609
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+R + + I + + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 468 QERNIDIFITGISSTLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFVNERPEYE 527
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDE
Sbjct: 528 HDRQWSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVLMCLNKLDAGTDEKITLISRDE 587
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ELK+ L+ SF L
Sbjct: 588 QSCFVVSYKELKKALESSFQAL 609
>gi|115492183|ref|XP_001210719.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197579|gb|EAU39279.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 557
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 126/201 (62%), Gaps = 6/201 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL + G+LI+ + S + N +++ R+YS ++N + +LL+ QK
Sbjct: 351 DLQHQDLVSFGQLIVTLGANSPSVMH--NPTKAMEHFTRAYSPQMKNSVFWLLNSMQKDQ 408
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
T+ + I ++ + D+ D L ++LS+E+ENGRL RL+ KL INERPE
Sbjct: 409 DHTIDIFITGISSQLMSTFDSALHMDDQLTSDLSRELENGRLVRLMTKLNFINERPEYEH 468
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAG+ EKI L+SRDEQ
Sbjct: 469 DRQWSENGERYFLKIFRDYVFHQVDAHGDPVVDLGHVLACLNKLDAGSDEKITLVSRDEQ 528
Query: 291 SVLVVSYAELKQCLDQSFHEL 311
S +VSY E+K+ L+ SF L
Sbjct: 529 SCFIVSYKEIKKALESSFQAL 549
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 100/152 (65%), Gaps = 3/152 (1%)
Query: 325 LYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
+LL+ QK T+ + I ++ + D+ D L ++LS+E+ENGRL RL+ KL
Sbjct: 398 FWLLNSMQKDQDHTIDIFITGISSQLMSTFDSALHMDDQLTSDLSRELENGRLVRLMTKL 457
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
INERPE D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAG+
Sbjct: 458 NFINERPEYEHDRQWSENGERYFLKIFRDYVFHQVDAHGDPVVDLGHVLACLNKLDAGSD 517
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
EKI L+SRDEQS +VSY E+K+ L+ SF L
Sbjct: 518 EKITLVSRDEQSCFIVSYKEIKKALESSFQAL 549
>gi|158513220|sp|A2QAQ3.2|PAN3_ASPNC RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
pan3; AltName: Full=PAB1P-dependent poly(A)-nuclease
Length = 664
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---RT 173
+ DL G+LI+ + + N +++ R+Y+A L+N + +LL+ QK R
Sbjct: 459 RQDLVNFGQLIVTLGANQPNVMH--NPTKAMEHFTRAYTAQLKNSVFWLLNGLQKDQERN 516
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + I + + D+ D L ++LS+E+ENGRL RL+ KL +NERPE D
Sbjct: 517 IDIFITGISSTLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFVNERPEYEHDRQ 576
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDEQS
Sbjct: 577 WSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVLMCLNKLDAGTDEKITLISRDEQSCF 636
Query: 294 VVSYAELKQCLDQSFHEL 311
VVSY ELK+ L+ SF L
Sbjct: 637 VVSYKELKKALESSFQAL 654
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+R + + I + + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 513 QERNIDIFITGISSTLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFVNERPEYE 572
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDE
Sbjct: 573 HDRQWSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVLMCLNKLDAGTDEKITLISRDE 632
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ELK+ L+ SF L
Sbjct: 633 QSCFVVSYKELKKALESSFQAL 654
>gi|303317962|ref|XP_003068983.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108664|gb|EER26838.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 658
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 124/203 (61%), Gaps = 10/203 (4%)
Query: 115 DLQ-DDLTALGKLILAMTCRS--LMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK 171
DLQ DL G+LIL + S LM N + + RSYSA L N + +LLS QK
Sbjct: 453 DLQHQDLVNFGQLILTLGANSPSLM----HNPTKATEHFNRSYSAQLNNSVYWLLSGMQK 508
Query: 172 ---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL 228
RT+ + I ++ + D+ D L ++LS+E+EN RL RLL KL INERPE
Sbjct: 509 DQERTIDIFISGISSQLMSTFDSSLHLDDQLISDLSRELENARLVRLLSKLNFINERPEY 568
Query: 229 NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD 288
D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAGT EK+ L+SRD
Sbjct: 569 EHDRQWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGTDEKVTLISRD 628
Query: 289 EQSVLVVSYAELKQCLDQSFHEL 311
EQS +VSY ELK+ ++ SF L
Sbjct: 629 EQSCFIVSYKELKKAVEASFQAL 651
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+RT+ + I ++ + D+ D L ++LS+E+EN RL RLL KL INERPE
Sbjct: 510 QERTIDIFISGISSQLMSTFDSSLHLDDQLISDLSRELENARLVRLLSKLNFINERPEYE 569
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAGT EK+ L+SRDE
Sbjct: 570 HDRQWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGTDEKVTLISRDE 629
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS +VSY ELK+ ++ SF L
Sbjct: 630 QSCFIVSYKELKKAVEASFQAL 651
>gi|242773719|ref|XP_002478296.1| poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Talaromyces stipitatus ATCC 10500]
gi|218721915|gb|EED21333.1| poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Talaromyces stipitatus ATCC 10500]
Length = 653
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 126/202 (62%), Gaps = 6/202 (2%)
Query: 114 HDLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK- 171
DLQ DL G+L+L + + + N +++ R+YS L+N + +LL+ QK
Sbjct: 446 QDLQLQDLVNFGQLMLNLGVSAAGTIGSPN--KAMEHFTRAYSPQLKNSVFWLLNGLQKD 503
Query: 172 --RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
R++ + I ++ + D+ D L ++LS+E+ENGRL RL+ K+ +NERPE
Sbjct: 504 QERSIDIFISGISSQLISTFDSALQMDDQLTSDLSRELENGRLVRLMTKMNFVNERPEYE 563
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
D WSE G+RY LKLFRDY+ HQV +D+ H+++CLNKLDAGT+EK+ L+SRDE
Sbjct: 564 HDRQWSENGERYFLKLFRDYVFHQVDAQNNAVVDLGHVLNCLNKLDAGTEEKVTLISRDE 623
Query: 290 QSVLVVSYAELKQCLDQSFHEL 311
QS VVSY ELK+ L+ SF L
Sbjct: 624 QSCFVVSYKELKKALESSFQAL 645
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 97/142 (68%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+R++ + I ++ + D+ D L ++LS+E+ENGRL RL+ K+ +NERPE
Sbjct: 504 QERSIDIFISGISSQLISTFDSALQMDDQLTSDLSRELENGRLVRLMTKMNFVNERPEYE 563
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LKLFRDY+ HQV +D+ H+++CLNKLDAGT+EK+ L+SRDE
Sbjct: 564 HDRQWSENGERYFLKLFRDYVFHQVDAQNNAVVDLGHVLNCLNKLDAGTEEKVTLISRDE 623
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ELK+ L+ SF L
Sbjct: 624 QSCFVVSYKELKKALESSFQAL 645
>gi|320036875|gb|EFW18813.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Coccidioides posadasii str. Silveira]
Length = 658
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 124/203 (61%), Gaps = 10/203 (4%)
Query: 115 DLQ-DDLTALGKLILAMTCRS--LMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK 171
DLQ DL G+LIL + S LM N + + RSYSA L N + +LLS QK
Sbjct: 453 DLQHQDLVNFGQLILTLGANSPSLM----HNPTKATEHFNRSYSAQLNNSVYWLLSGMQK 508
Query: 172 ---RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL 228
RT+ + I ++ + D+ D L ++LS+E+EN RL RLL KL INERPE
Sbjct: 509 DQERTIDIFISGISSQLMSTFDSSLHLDDQLISDLSRELENARLVRLLSKLNFINERPEY 568
Query: 229 NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD 288
D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAGT EK+ L+SRD
Sbjct: 569 EHDRQWSENGERYFLKLFRDYVFHQVDAQNVPVVDLGHVLTCLNKLDAGTDEKVTLISRD 628
Query: 289 EQSVLVVSYAELKQCLDQSFHEL 311
EQS +VSY ELK+ ++ SF L
Sbjct: 629 EQSCFIVSYKELKKAVEASFQAL 651
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+RT+ + I ++ + D+ D L ++LS+E+EN RL RLL KL INERPE
Sbjct: 510 QERTIDIFISGISSQLMSTFDSSLHLDDQLISDLSRELENARLVRLLSKLNFINERPEYE 569
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAGT EK+ L+SRDE
Sbjct: 570 HDRQWSENGERYFLKLFRDYVFHQVDAQNVPVVDLGHVLTCLNKLDAGTDEKVTLISRDE 629
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS +VSY ELK+ ++ SF L
Sbjct: 630 QSCFIVSYKELKKAVEASFQAL 651
>gi|357529488|sp|Q5BFB1.3|PAN3_EMENI RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
pan3; AltName: Full=PAB1P-dependent poly(A)-nuclease
Length = 661
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LIL + + N +++ R+YS L+N +++LL QK
Sbjct: 455 DLQRQDLVNFGQLILTLGANQPNVIH--NPSKAMEHFTRAYSPQLKNTVMWLLGGMQKDQ 512
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + L+ I ++ + D+ D L ++L +E+ENGRL RLL KL INERPE
Sbjct: 513 ERNIDILINGISSQLMSTFDSALHLDDQLTSDLGRELENGRLVRLLTKLNFINERPEHEH 572
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+R+ LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT E+I L+SRDEQ
Sbjct: 573 DRQWSENGERFYLKIFRDYVFHQVDASGDPVVDLGHVLTCLNKLDAGTDERITLVSRDEQ 632
Query: 291 SVLVVSYAELKQCLDQSFHEL 311
+ VVSY ELK+ L+ SF L
Sbjct: 633 TCFVVSYKELKKGLESSFQAL 653
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 96/142 (67%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+R + L+ I ++ + D+ D L ++L +E+ENGRL RLL KL INERPE
Sbjct: 512 QERNIDILINGISSQLMSTFDSALHLDDQLTSDLGRELENGRLVRLLTKLNFINERPEHE 571
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+R+ LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT E+I L+SRDE
Sbjct: 572 HDRQWSENGERFYLKIFRDYVFHQVDASGDPVVDLGHVLTCLNKLDAGTDERITLVSRDE 631
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
Q+ VVSY ELK+ L+ SF L
Sbjct: 632 QTCFVVSYKELKKGLESSFQAL 653
>gi|317156800|ref|XP_001826024.2| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Aspergillus oryzae RIB40]
Length = 643
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 123/198 (62%), Gaps = 5/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---RT 173
+ DL G+LI+ + + + N +++ R+YS L+N + +LL+ QK R
Sbjct: 440 RQDLVNFGQLIVTLGANTPSVMH--NPTKAMEHFTRAYSPQLKNSVFWLLNGLQKDQDRN 497
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE D
Sbjct: 498 IDIFITGISSQLMSTFDSALHLDDELTSDLSRELENGRLVRLVTKLNFVNERPEYEHDRQ 557
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDEQS
Sbjct: 558 WSENGERYFLKMFRDYVFHQVDAQGDPVVDLGHVLSCLNKLDAGTDEKITLVSRDEQSCF 617
Query: 294 VVSYAELKQCLDQSFHEL 311
VVSY ++K+ L+ SF L
Sbjct: 618 VVSYKDIKKALESSFQAL 635
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 494 QDRNIDIFITGISSQLMSTFDSALHLDDELTSDLSRELENGRLVRLVTKLNFVNERPEYE 553
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDE
Sbjct: 554 HDRQWSENGERYFLKMFRDYVFHQVDAQGDPVVDLGHVLSCLNKLDAGTDEKITLVSRDE 613
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ++K+ L+ SF L
Sbjct: 614 QSCFVVSYKDIKKALESSFQAL 635
>gi|391873749|gb|EIT82757.1| poly(A) ribonuclease subunit [Aspergillus oryzae 3.042]
Length = 666
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 123/198 (62%), Gaps = 5/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---RT 173
+ DL G+LI+ + + + N +++ R+YS L+N + +LL+ QK R
Sbjct: 463 RQDLVNFGQLIVTLGANTPSVMH--NPTKAMEHFTRAYSPQLKNSVFWLLNGLQKDQDRN 520
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE D
Sbjct: 521 IDIFITGISSQLMSTFDSALHLDDELTSDLSRELENGRLVRLVTKLNFVNERPEYEHDRQ 580
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDEQS
Sbjct: 581 WSENGERYFLKMFRDYVFHQVDAQGDPVVDLGHVLSCLNKLDAGTDEKITLVSRDEQSCF 640
Query: 294 VVSYAELKQCLDQSFHEL 311
VVSY ++K+ L+ SF L
Sbjct: 641 VVSYKDIKKALESSFQAL 658
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 517 QDRNIDIFITGISSQLMSTFDSALHLDDELTSDLSRELENGRLVRLVTKLNFVNERPEYE 576
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDE
Sbjct: 577 HDRQWSENGERYFLKMFRDYVFHQVDAQGDPVVDLGHVLSCLNKLDAGTDEKITLVSRDE 636
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ++K+ L+ SF L
Sbjct: 637 QSCFVVSYKDIKKALESSFQAL 658
>gi|238492867|ref|XP_002377670.1| poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Aspergillus flavus NRRL3357]
gi|220696164|gb|EED52506.1| poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Aspergillus flavus NRRL3357]
Length = 619
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 123/198 (62%), Gaps = 5/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---RT 173
+ DL G+LI+ + + + N +++ R+YS L+N + +LL+ QK R
Sbjct: 416 RQDLVNFGQLIVTLGANTPSVMH--NPTKAMEHFTRAYSPQLKNSVFWLLNGLQKDQDRN 473
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE D
Sbjct: 474 IDIFITGISSQLMSTFDSALHLDDELTSDLSRELENGRLVRLVTKLNFVNERPEYEHDRQ 533
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDEQS
Sbjct: 534 WSENGERYFLKMFRDYVFHQVDAQGDPVVDLGHVLSCLNKLDAGTDEKITLVSRDEQSCF 593
Query: 294 VVSYAELKQCLDQSFHEL 311
VVSY ++K+ L+ SF L
Sbjct: 594 VVSYKDIKKALESSFQAL 611
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 470 QDRNIDIFITGISSQLMSTFDSALHLDDELTSDLSRELENGRLVRLVTKLNFVNERPEYE 529
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDE
Sbjct: 530 HDRQWSENGERYFLKMFRDYVFHQVDAQGDPVVDLGHVLSCLNKLDAGTDEKITLVSRDE 589
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ++K+ L+ SF L
Sbjct: 590 QSCFVVSYKDIKKALESSFQAL 611
>gi|158564287|sp|Q2U0M4.2|PAN3_ASPOR RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
pan3; AltName: Full=PAB1P-dependent poly(A)-nuclease
Length = 662
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 123/198 (62%), Gaps = 5/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---RT 173
+ DL G+LI+ + + + N +++ R+YS L+N + +LL+ QK R
Sbjct: 459 RQDLVNFGQLIVTLGANTPSVMH--NPTKAMEHFTRAYSPQLKNSVFWLLNGLQKDQDRN 516
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE D
Sbjct: 517 IDIFITGISSQLMSTFDSALHLDDELTSDLSRELENGRLVRLVTKLNFVNERPEYEHDRQ 576
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDEQS
Sbjct: 577 WSENGERYFLKMFRDYVFHQVDAQGDPVVDLGHVLSCLNKLDAGTDEKITLVSRDEQSCF 636
Query: 294 VVSYAELKQCLDQSFHEL 311
VVSY ++K+ L+ SF L
Sbjct: 637 VVSYKDIKKALESSFQAL 654
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 513 QDRNIDIFITGISSQLMSTFDSALHLDDELTSDLSRELENGRLVRLVTKLNFVNERPEYE 572
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDE
Sbjct: 573 HDRQWSENGERYFLKMFRDYVFHQVDAQGDPVVDLGHVLSCLNKLDAGTDEKITLVSRDE 632
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ++K+ L+ SF L
Sbjct: 633 QSCFVVSYKDIKKALESSFQAL 654
>gi|83774768|dbj|BAE64891.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 577
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 123/198 (62%), Gaps = 5/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---RT 173
+ DL G+LI+ + + + N +++ R+YS L+N + +LL+ QK R
Sbjct: 374 RQDLVNFGQLIVTLGANTPSVMH--NPTKAMEHFTRAYSPQLKNSVFWLLNGLQKDQDRN 431
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE D
Sbjct: 432 IDIFITGISSQLMSTFDSALHLDDELTSDLSRELENGRLVRLVTKLNFVNERPEYEHDRQ 491
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDEQS
Sbjct: 492 WSENGERYFLKMFRDYVFHQVDAQGDPVVDLGHVLSCLNKLDAGTDEKITLVSRDEQSCF 551
Query: 294 VVSYAELKQCLDQSFHEL 311
VVSY ++K+ L+ SF L
Sbjct: 552 VVSYKDIKKALESSFQAL 569
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 428 QDRNIDIFITGISSQLMSTFDSALHLDDELTSDLSRELENGRLVRLVTKLNFVNERPEYE 487
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT EKI L+SRDE
Sbjct: 488 HDRQWSENGERYFLKMFRDYVFHQVDAQGDPVVDLGHVLSCLNKLDAGTDEKITLVSRDE 547
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ++K+ L+ SF L
Sbjct: 548 QSCFVVSYKDIKKALESSFQAL 569
>gi|67516975|ref|XP_658373.1| hypothetical protein AN0769.2 [Aspergillus nidulans FGSC A4]
gi|40746255|gb|EAA65411.1| hypothetical protein AN0769.2 [Aspergillus nidulans FGSC A4]
Length = 625
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LIL + + N +++ R+YS L+N +++LL QK
Sbjct: 419 DLQRQDLVNFGQLILTLGANQPNVIH--NPSKAMEHFTRAYSPQLKNTVMWLLGGMQKDQ 476
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + L+ I ++ + D+ D L ++L +E+ENGRL RLL KL INERPE
Sbjct: 477 ERNIDILINGISSQLMSTFDSALHLDDQLTSDLGRELENGRLVRLLTKLNFINERPEHEH 536
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+R+ LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT E+I L+SRDEQ
Sbjct: 537 DRQWSENGERFYLKIFRDYVFHQVDASGDPVVDLGHVLTCLNKLDAGTDERITLVSRDEQ 596
Query: 291 SVLVVSYAELKQCLDQSFHEL 311
+ VVSY ELK+ L+ SF L
Sbjct: 597 TCFVVSYKELKKGLESSFQAL 617
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 96/142 (67%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+R + L+ I ++ + D+ D L ++L +E+ENGRL RLL KL INERPE
Sbjct: 476 QERNIDILINGISSQLMSTFDSALHLDDQLTSDLGRELENGRLVRLLTKLNFINERPEHE 535
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+R+ LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT E+I L+SRDE
Sbjct: 536 HDRQWSENGERFYLKIFRDYVFHQVDASGDPVVDLGHVLTCLNKLDAGTDERITLVSRDE 595
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
Q+ VVSY ELK+ L+ SF L
Sbjct: 596 QTCFVVSYKELKKGLESSFQAL 617
>gi|258578253|ref|XP_002543308.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903574|gb|EEP77975.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 644
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 119/196 (60%), Gaps = 5/196 (2%)
Query: 119 DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---RTVV 175
DL + G+LIL + S +++ R YSA L N + +LL+ QK RT+
Sbjct: 444 DLVSFGQLILTLGANSPSVTHSST--KAMEHFNRVYSAQLNNSVFWLLNGMQKDQERTID 501
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
+ I ++ + D+ D L +++S+E+EN RL RLL KL INERPE D WS
Sbjct: 502 IFISGISSQLISTFDSSLHLDDQLTSDISRELENARLVRLLTKLNFINERPEYEHDRQWS 561
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
E G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAGT EKI L+SRDEQS +V
Sbjct: 562 ENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGTDEKITLISRDEQSCFIV 621
Query: 296 SYAELKQCLDQSFHEL 311
+Y ELK+ ++ SF L
Sbjct: 622 TYKELKKAVEASFQAL 637
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 95/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+RT+ + I ++ + D+ D L +++S+E+EN RL RLL KL INERPE
Sbjct: 496 QERTIDIFISGISSQLISTFDSSLHLDDQLTSDISRELENARLVRLLTKLNFINERPEYE 555
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAGT EKI L+SRDE
Sbjct: 556 HDRQWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGTDEKITLISRDE 615
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS +V+Y ELK+ ++ SF L
Sbjct: 616 QSCFIVTYKELKKAVEASFQAL 637
>gi|358336073|dbj|GAA54635.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Clonorchis
sinensis]
Length = 774
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 124/198 (62%), Gaps = 2/198 (1%)
Query: 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTV 174
D D LGKL++ C + A+Q TS +L+ R+Y ++ L+ L+S Q V
Sbjct: 519 DQAGDFVQLGKLLVGAACGTAEAIQTSQRVTSFNLLQRTYRPEMVTLLRGLIS-GQITGV 577
Query: 175 VDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN-LDPT 233
LM Y QL V H D LE +L ME RLFRL+ KL +I ER + N +P
Sbjct: 578 DQLMRATSPYVYDQLTTVSDHSDFLERQLFLGMECDRLFRLICKLQSIVERNDRNGTNPD 637
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETGDRYMLKLFRD++ HQ + G P+LD+SHI+ LNK++A + E++CL+SRD Q+V+
Sbjct: 638 WSETGDRYMLKLFRDFVFHQTDQLGAPYLDLSHIITTLNKVEASSHERLCLVSRDSQNVI 697
Query: 294 VVSYAELKQCLDQSFHEL 311
+++YA++KQ LD SF L
Sbjct: 698 LMTYADIKQWLDSSFSHL 715
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 134/255 (52%), Gaps = 33/255 (12%)
Query: 230 LDPT--WSETGDRYMLKLF--RDYLLHQVQEDGRPWL------DMSHIVHCLNKLDAGTQ 279
LDPT + G R + F +D L HQ Q+ P L D + L GT
Sbjct: 483 LDPTKVLIQDGTRLRINCFGLKDILFHQSQD---PNLAEDQAGDFVQLGKLLVGAACGTA 539
Query: 280 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDL 339
E I + S V S+ L++ + P+ L L Q V L
Sbjct: 540 EAI------QTSQRVTSFNLLQR-------------TYRPEMVTLLRGLISGQITGVDQL 580
Query: 340 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN-LDPTWSE 398
M Y QL V H D LE +L ME RLFRL+ KL +I ER + N +P WSE
Sbjct: 581 MRATSPYVYDQLTTVSDHSDFLERQLFLGMECDRLFRLICKLQSIVERNDRNGTNPDWSE 640
Query: 399 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 458
TGDRYMLKLFRD++ HQ + G P+LD+SHI+ LNK++A + E++CL+SRD Q+V++++
Sbjct: 641 TGDRYMLKLFRDFVFHQTDQLGAPYLDLSHIITTLNKVEASSHERLCLVSRDSQNVILMT 700
Query: 459 YAELKQCLDQSFHEL 473
YA++KQ LD SF L
Sbjct: 701 YADIKQWLDSSFSHL 715
>gi|295664208|ref|XP_002792656.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226278770|gb|EEH34336.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 659
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 123/202 (60%), Gaps = 6/202 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ AR+Y+ L+N + +LL QK
Sbjct: 454 DLQHQDLVNFGQLIVTLGANSPSVIH--NPTKAMEHFARAYTPQLKNSVFWLLGALQKDQ 511
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++L +E+EN RL RLL KL INERPE
Sbjct: 512 ERNIDIFVTGISSQLISTFDSALHLDDQLTSDLCRELENARLVRLLTKLNFINERPEYEH 571
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG+ EK+ L+SRDEQ
Sbjct: 572 DRQWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGSDEKVTLISRDEQ 631
Query: 291 SVLVVSYAELKQCLDQSFHELS 312
S +VSY ELK+ ++ SF L+
Sbjct: 632 SCFIVSYKELKKAVESSFQALT 653
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 96/150 (64%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
L L Q+R + + I ++ + D+ D L ++L +E+EN RL RLL KL I
Sbjct: 504 LGALQKDQERNIDIFVTGISSQLISTFDSALHLDDQLTSDLCRELENARLVRLLTKLNFI 563
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERPE D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG+ EK+
Sbjct: 564 NERPEYEHDRQWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGSDEKV 623
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
L+SRDEQS +VSY ELK+ ++ SF L+
Sbjct: 624 TLISRDEQSCFIVSYKELKKAVESSFQALT 653
>gi|121701127|ref|XP_001268828.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
gi|119396971|gb|EAW07402.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
Length = 756
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ R+YS ++N + +LL+ QK
Sbjct: 550 DLQRQDLVNFGQLIVTLGANSPTVMH--NPTKAMEHFTRAYSPQMKNSVFWLLNGLQKDQ 607
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 608 DRNIDIFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNLVNERPEYEH 667
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+RY LK+FRDY+ HQV G +D+ H++ CLNKLDAG+ EKI L+SRDEQ
Sbjct: 668 DRQWSENGERYFLKIFRDYVFHQVDAQGDAVVDLGHVLSCLNKLDAGSDEKITLVSRDEQ 727
Query: 291 SVLVVSYAELKQCLDQSFHEL 311
S +VSY ELK+ L+ SF L
Sbjct: 728 SCFIVSYKELKKALESSFQAL 748
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 94/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 607 QDRNIDIFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNLVNERPEYE 666
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G +D+ H++ CLNKLDAG+ EKI L+SRDE
Sbjct: 667 HDRQWSENGERYFLKIFRDYVFHQVDAQGDAVVDLGHVLSCLNKLDAGSDEKITLVSRDE 726
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS +VSY ELK+ L+ SF L
Sbjct: 727 QSCFIVSYKELKKALESSFQAL 748
>gi|158512694|sp|A1CP31.2|PAN3_ASPCL RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
pan3; AltName: Full=PAB1P-dependent poly(A)-nuclease
Length = 659
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ R+YS ++N + +LL+ QK
Sbjct: 453 DLQRQDLVNFGQLIVTLGANSPTVMH--NPTKAMEHFTRAYSPQMKNSVFWLLNGLQKDQ 510
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 511 DRNIDIFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNLVNERPEYEH 570
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+RY LK+FRDY+ HQV G +D+ H++ CLNKLDAG+ EKI L+SRDEQ
Sbjct: 571 DRQWSENGERYFLKIFRDYVFHQVDAQGDAVVDLGHVLSCLNKLDAGSDEKITLVSRDEQ 630
Query: 291 SVLVVSYAELKQCLDQSFHEL 311
S +VSY ELK+ L+ SF L
Sbjct: 631 SCFIVSYKELKKALESSFQAL 651
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 94/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q R + + I ++ + D+ D L ++LS+E+ENGRL RL+ KL +NERPE
Sbjct: 510 QDRNIDIFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNLVNERPEYE 569
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LK+FRDY+ HQV G +D+ H++ CLNKLDAG+ EKI L+SRDE
Sbjct: 570 HDRQWSENGERYFLKIFRDYVFHQVDAQGDAVVDLGHVLSCLNKLDAGSDEKITLVSRDE 629
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS +VSY ELK+ L+ SF L
Sbjct: 630 QSCFIVSYKELKKALESSFQAL 651
>gi|225677619|gb|EEH15903.1| pabp1-dependent poly(a)-specific ribonuclease subunit pan3
[Paracoccidioides brasiliensis Pb03]
Length = 736
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 123/201 (61%), Gaps = 6/201 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N +++ AR+Y+ L+N + +LL QK
Sbjct: 485 DLQHQDLVNFGQLIVTLGANSPSVIH--NPTKAMEHFARAYTPQLKNSVFWLLGALQKDQ 542
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + + I ++ + D+ D L ++L +E+EN RL RLL KL INERPE
Sbjct: 543 ERNIDIFVTGISSQLISTFDSALHLDDQLTSDLCRELENARLVRLLTKLNFINERPEYEH 602
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG++EK+ L+SRDEQ
Sbjct: 603 DRQWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGSEEKVTLISRDEQ 662
Query: 291 SVLVVSYAELKQCLDQSFHEL 311
S +VSY ELK+ ++ SF L
Sbjct: 663 SCFIVSYKELKKAVESSFQAL 683
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+R + + I ++ + D+ D L ++L +E+EN RL RLL KL INERPE
Sbjct: 542 QERNIDIFVTGISSQLISTFDSALHLDDQLTSDLCRELENARLVRLLTKLNFINERPEYE 601
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG++EK+ L+SRDE
Sbjct: 602 HDRQWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGSEEKVTLISRDE 661
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS +VSY ELK+ ++ SF L
Sbjct: 662 QSCFIVSYKELKKAVESSFQAL 683
>gi|259488953|tpe|CBF88822.1| TPA: poly(A)-binding protein-dependent poly(A) ribonuclease,
putative (AFU_orthologue; AFUA_1G14310) [Aspergillus
nidulans FGSC A4]
Length = 447
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LIL + + N +++ R+YS L+N +++LL QK
Sbjct: 241 DLQRQDLVNFGQLILTLGANQPNVIH--NPSKAMEHFTRAYSPQLKNTVMWLLGGMQKDQ 298
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R + L+ I ++ + D+ D L ++L +E+ENGRL RLL KL INERPE
Sbjct: 299 ERNIDILINGISSQLMSTFDSALHLDDQLTSDLGRELENGRLVRLLTKLNFINERPEHEH 358
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+R+ LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT E+I L+SRDEQ
Sbjct: 359 DRQWSENGERFYLKIFRDYVFHQVDASGDPVVDLGHVLTCLNKLDAGTDERITLVSRDEQ 418
Query: 291 SVLVVSYAELKQCLDQSFHEL 311
+ VVSY ELK+ L+ SF L
Sbjct: 419 TCFVVSYKELKKGLESSFQAL 439
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 96/142 (67%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+R + L+ I ++ + D+ D L ++L +E+ENGRL RLL KL INERPE
Sbjct: 298 QERNIDILINGISSQLMSTFDSALHLDDQLTSDLGRELENGRLVRLLTKLNFINERPEHE 357
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+R+ LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT E+I L+SRDE
Sbjct: 358 HDRQWSENGERFYLKIFRDYVFHQVDASGDPVVDLGHVLTCLNKLDAGTDERITLVSRDE 417
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
Q+ VVSY ELK+ L+ SF L
Sbjct: 418 QTCFVVSYKELKKGLESSFQAL 439
>gi|154305659|ref|XP_001553231.1| hypothetical protein BC1G_07644 [Botryotinia fuckeliana B05.10]
gi|347835585|emb|CCD50157.1| similar to PAB-dependent poly(A)-specific ribonuclease subunit pan3
[Botryotinia fuckeliana]
Length = 690
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 125/200 (62%), Gaps = 6/200 (3%)
Query: 118 DDLTALGKLILAMTCRSLMAVQREN---LQTSIDLMARSYSADLRNLILYLLSVHQKRTV 174
+DL G L+L++ + + N LQT+ID ++R YSA+L + I++LL+
Sbjct: 484 EDLHLFGILMLSLATVNASITPQTNPQVLQTNIDSLSRIYSAELVDTIMWLLTTPSSPET 543
Query: 175 VDLMPMI---GARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 231
DL I R T D+ D L ++L +E+EN RL RL+ KLG INERPE +
Sbjct: 544 KDLQTFIRGISGRMATAFDSSLQANDELTSDLGRELENARLVRLMAKLGNINERPEYENN 603
Query: 232 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 291
P WSETG++Y LKLFRDY+ H V +GRP DM+ I+ CLNKLDAG+ EKI L SRD ++
Sbjct: 604 PQWSETGNQYTLKLFRDYVFHSVDPEGRPVTDMAWIIKCLNKLDAGSDEKIQLTSRDGEN 663
Query: 292 VLVVSYAELKQCLDQSFHEL 311
+VS+ E+K+ ++ ++ +L
Sbjct: 664 CFIVSFKEIKKQVNTAWGDL 683
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 97/152 (63%), Gaps = 3/152 (1%)
Query: 325 LYLLSVHQKRTVVDLMPMI---GARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
++LL+ DL I R T D+ D L ++L +E+EN RL RL+ KL
Sbjct: 532 MWLLTTPSSPETKDLQTFIRGISGRMATAFDSSLQANDELTSDLGRELENARLVRLMAKL 591
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
G INERPE +P WSETG++Y LKLFRDY+ H V +GRP DM+ I+ CLNKLDAG+
Sbjct: 592 GNINERPEYENNPQWSETGNQYTLKLFRDYVFHSVDPEGRPVTDMAWIIKCLNKLDAGSD 651
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
EKI L SRD ++ +VS+ E+K+ ++ ++ +L
Sbjct: 652 EKIQLTSRDGENCFIVSFKEIKKQVNTAWGDL 683
>gi|384487422|gb|EIE79602.1| hypothetical protein RO3G_04307 [Rhizopus delemar RA 99-880]
Length = 550
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 106/149 (71%), Gaps = 5/149 (3%)
Query: 170 QKRTVVDLMPMI-----GARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINE 224
QK+ ++DL +I ++ D D LE +L +E+ENGR+ +L+ K+G INE
Sbjct: 399 QKQDLIDLGELIITLACHSQTIGNKDEAVARNDELERQLGRELENGRIVKLISKMGFINE 458
Query: 225 RPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICL 284
RPE ++DP+WSETGDRY++KLFRDY+ HQV E G+P +DM H++ CL KLDAG EKI L
Sbjct: 459 RPEFDMDPSWSETGDRYLIKLFRDYVFHQVDEHGQPVIDMVHVLTCLKKLDAGVDEKIML 518
Query: 285 MSRDEQSVLVVSYAELKQCLDQSFHELSS 313
MSRDEQS LVVS+ E+K C+ +F +L+S
Sbjct: 519 MSRDEQSCLVVSFKEIKNCITSAFTDLNS 547
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 106/149 (71%), Gaps = 5/149 (3%)
Query: 332 QKRTVVDLMPMI-----GARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINE 386
QK+ ++DL +I ++ D D LE +L +E+ENGR+ +L+ K+G INE
Sbjct: 399 QKQDLIDLGELIITLACHSQTIGNKDEAVARNDELERQLGRELENGRIVKLISKMGFINE 458
Query: 387 RPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICL 446
RPE ++DP+WSETGDRY++KLFRDY+ HQV E G+P +DM H++ CL KLDAG EKI L
Sbjct: 459 RPEFDMDPSWSETGDRYLIKLFRDYVFHQVDEHGQPVIDMVHVLTCLKKLDAGVDEKIML 518
Query: 447 MSRDEQSVLVVSYAELKQCLDQSFHELSS 475
MSRDEQS LVVS+ E+K C+ +F +L+S
Sbjct: 519 MSRDEQSCLVVSFKEIKNCITSAFTDLNS 547
>gi|212531687|ref|XP_002146000.1| poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Talaromyces marneffei ATCC 18224]
gi|210071364|gb|EEA25453.1| poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Talaromyces marneffei ATCC 18224]
Length = 648
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/202 (43%), Positives = 125/202 (61%), Gaps = 6/202 (2%)
Query: 114 HDLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK- 171
DLQ DL G+L+L + + A+ + +++ R YS L+N + +LL+ QK
Sbjct: 441 QDLQLQDLVNFGQLMLNLGVSAAGALGSPS--KAMEHFTRVYSPQLKNSVFWLLNGLQKD 498
Query: 172 --RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
R++ + I A+ + D+ D L ++LS+E+EN RL RL+ KL INERPE
Sbjct: 499 QERSIDIFISGISAQLISTFDSALQMDDQLTSDLSRELENARLVRLITKLNFINERPEYE 558
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
D WSE G+RY LKLFRDY+ HQV +D+ H+++CLNKLDAG++EK+ L+SRDE
Sbjct: 559 HDRQWSENGERYFLKLFRDYVFHQVDAQNNAVVDLGHVLNCLNKLDAGSEEKVTLISRDE 618
Query: 290 QSVLVVSYAELKQCLDQSFHEL 311
QS VVSY ELK+ L+ SF L
Sbjct: 619 QSCFVVSYKELKKALESSFQAL 640
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 96/142 (67%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+R++ + I A+ + D+ D L ++LS+E+EN RL RL+ KL INERPE
Sbjct: 499 QERSIDIFISGISAQLISTFDSALQMDDQLTSDLSRELENARLVRLITKLNFINERPEYE 558
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LKLFRDY+ HQV +D+ H+++CLNKLDAG++EK+ L+SRDE
Sbjct: 559 HDRQWSENGERYFLKLFRDYVFHQVDAQNNAVVDLGHVLNCLNKLDAGSEEKVTLISRDE 618
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ELK+ L+ SF L
Sbjct: 619 QSCFVVSYKELKKALESSFQAL 640
>gi|428177649|gb|EKX46528.1| hypothetical protein GUITHDRAFT_162975 [Guillardia theta CCMP2712]
Length = 600
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 115/181 (63%), Gaps = 7/181 (3%)
Query: 138 VQRENLQTSIDLMARSYSADLRNLILYLLSV-----HQKRTVVDLMPMIGARYYTQLDAV 192
+Q NL TS+D ++ Y ADL++ I+YL++ ++ I R Q+D
Sbjct: 352 LQAHNLSTSVDYISAHYPADLKDFIVYLITQPAGPGQVPTSIFSACARISGRLLEQVDFT 411
Query: 193 QLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL--DPTWSETGDRYMLKLFRDYL 250
H D+ EL+KE++NGRLFRLLVKL I ERP+ +WSETGDRY+LKLF DY+
Sbjct: 412 YQHIDTCYTELTKEIQNGRLFRLLVKLNMIIERPQPGTPAAASWSETGDRYLLKLFMDYV 471
Query: 251 LHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHE 310
HQ + G P +D +V LNKLD G EKI LMS DE ++LVVSYA+LK C+++SFHE
Sbjct: 472 FHQRDDGGNPVVDWGAVVQRLNKLDVGVSEKILLMSPDENTILVVSYADLKGCVERSFHE 531
Query: 311 L 311
L
Sbjct: 532 L 532
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 91/133 (68%), Gaps = 2/133 (1%)
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL--DPTWSETG 400
I R Q+D H D+ EL+KE++NGRLFRLLVKL I ERP+ +WSETG
Sbjct: 400 ISGRLLEQVDFTYQHIDTCYTELTKEIQNGRLFRLLVKLNMIIERPQPGTPAAASWSETG 459
Query: 401 DRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYA 460
DRY+LKLF DY+ HQ + G P +D +V LNKLD G EKI LMS DE ++LVVSYA
Sbjct: 460 DRYLLKLFMDYVFHQRDDGGNPVVDWGAVVQRLNKLDVGVSEKILLMSPDENTILVVSYA 519
Query: 461 ELKQCLDQSFHEL 473
+LK C+++SFHEL
Sbjct: 520 DLKGCVERSFHEL 532
>gi|342886029|gb|EGU85972.1| hypothetical protein FOXB_03481 [Fusarium oxysporum Fo5176]
Length = 588
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 115/173 (66%), Gaps = 3/173 (1%)
Query: 142 NLQTSIDLMARSYSADLRNLILYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDS 198
N S++ ++R YS +LR+ +L+LL+ Q ++ + + + I R + D D
Sbjct: 406 NFNMSLEQLSRVYSVELRDTVLWLLTPQQPPAQKGIEEFVRGIAGRITSTFDQNLQAYDK 465
Query: 199 LENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDG 258
++ +E+ENGR+ RL++KL T+NER + N D WSE G+RYMLKLFRDY+ HQV +G
Sbjct: 466 ARADVMREVENGRVARLMMKLATVNERYDFNGDQNWSENGERYMLKLFRDYVFHQVDSNG 525
Query: 259 RPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
P LDM H++ C++KLD GT+E+ICL SRDEQ+ +VSY ELK+ L S+ EL
Sbjct: 526 NPVLDMGHMLRCMSKLDIGTEERICLTSRDEQTSFLVSYKELKKMLANSYGEL 578
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
Query: 304 LDQSFHELSSSASLTPKSTLPLYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDS 360
+ S +LS S+ + T+ L+LL+ Q ++ + + + I R + D D
Sbjct: 407 FNMSLEQLSRVYSVELRDTV-LWLLTPQQPPAQKGIEEFVRGIAGRITSTFDQNLQAYDK 465
Query: 361 LENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDG 420
++ +E+ENGR+ RL++KL T+NER + N D WSE G+RYMLKLFRDY+ HQV +G
Sbjct: 466 ARADVMREVENGRVARLMMKLATVNERYDFNGDQNWSENGERYMLKLFRDYVFHQVDSNG 525
Query: 421 RPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
P LDM H++ C++KLD GT+E+ICL SRDEQ+ +VSY ELK+ L S+ EL
Sbjct: 526 NPVLDMGHMLRCMSKLDIGTEERICLTSRDEQTSFLVSYKELKKMLANSYGEL 578
>gi|452846166|gb|EME48099.1| hypothetical protein DOTSEDRAFT_167686 [Dothistroma septosporum
NZE10]
Length = 687
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 136/228 (59%), Gaps = 30/228 (13%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS--------- 167
++DL LG+LIL + R+ MA Q N+ +++ ++RSYS LR+ I +LLS
Sbjct: 458 RNDLRDLGRLILGVATRNAMAHQ--NMNKALEQVSRSYSERLRSCIGWLLSPPAAVDATS 515
Query: 168 -----VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 222
+ + + L+ I + T +D+ D + + L +E+ENGRL RLL KL I
Sbjct: 516 TTAPTISLEYNISALLTSISDKILTVVDSTLHLEDGITSNLMRELENGRLVRLLAKLNVI 575
Query: 223 NERPELNLDP--------------TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIV 268
ERP+ P +WSETG+RY LKLFRD++ HQV +GRP LD+ HI+
Sbjct: 576 LERPDTGSAPDATINPALLNQPSTSWSETGERYYLKLFRDFVFHQVDPEGRPVLDLGHII 635
Query: 269 HCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
CLNKLDAG EKI L+SRDEQS+ ++SY E+K+ + ++ E+S +++
Sbjct: 636 TCLNKLDAGIDEKIELISRDEQSMFIISYKEIKRGFEAAWGEISKASN 683
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 99/157 (63%), Gaps = 14/157 (8%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP- 394
+ L+ I + T +D+ D + + L +E+ENGRL RLL KL I ERP+ P
Sbjct: 527 ISALLTSISDKILTVVDSTLHLEDGITSNLMRELENGRLVRLLAKLNVILERPDTGSAPD 586
Query: 395 -------------TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
+WSETG+RY LKLFRD++ HQV +GRP LD+ HI+ CLNKLDAG
Sbjct: 587 ATINPALLNQPSTSWSETGERYYLKLFRDFVFHQVDPEGRPVLDLGHIITCLNKLDAGID 646
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDEQS+ ++SY E+K+ + ++ E+S +++
Sbjct: 647 EKIELISRDEQSMFIISYKEIKRGFEAAWGEISKASN 683
>gi|67623197|ref|XP_667881.1| PABP1-dependent poly A-specific ribonuclease subunit PAN3;
PABP-dependent poly(A) nuclease 3 [Cryptosporidium
hominis TU502]
gi|54659046|gb|EAL37644.1| PABP1-dependent poly A-specific ribonuclease subunit PAN3;
PABP-dependent poly(A) nuclease 3 [Cryptosporidium
hominis]
Length = 763
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 126/207 (60%), Gaps = 5/207 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQT-SIDLMARSYSADLRNLILYLLSV----HQK 171
+ DL ALG +ILA+ C SL + N I L + YS DL+ L+L LLS
Sbjct: 551 KQDLVALGYIILALCCGSLTIINDLNHAVEQIFLKSSLYSNDLKKLVLILLSKPALNKNN 610
Query: 172 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 231
V L M+ AR Q++ D+LENE KE++NGRLFRLL K+ TI +R +LN
Sbjct: 611 LDVFILANMLAARMIPQIEHSLKLTDALENEFRKEIDNGRLFRLLTKINTIADRTQLNAI 670
Query: 232 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 291
W+ETGDRY+ KLFR+YL Q GRP +DM HI+ L K+D GT E I LMS D S
Sbjct: 671 HKWNETGDRYICKLFREYLFQQTDSQGRPVVDMGHILDSLAKVDVGTSETITLMSSDGSS 730
Query: 292 VLVVSYAELKQCLDQSFHELSSSASLT 318
+L+VS+A++K +++SF E+ ++ + +
Sbjct: 731 ILLVSFADIKHSIEKSFCEIIAATTTS 757
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 96/145 (66%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 395
V L M+ AR Q++ D+LENE KE++NGRLFRLL K+ TI +R +LN
Sbjct: 613 VFILANMLAARMIPQIEHSLKLTDALENEFRKEIDNGRLFRLLTKINTIADRTQLNAIHK 672
Query: 396 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 455
W+ETGDRY+ KLFR+YL Q GRP +DM HI+ L K+D GT E I LMS D S+L
Sbjct: 673 WNETGDRYICKLFREYLFQQTDSQGRPVVDMGHILDSLAKVDVGTSETITLMSSDGSSIL 732
Query: 456 VVSYAELKQCLDQSFHELSSSASLT 480
+VS+A++K +++SF E+ ++ + +
Sbjct: 733 LVSFADIKHSIEKSFCEIIAATTTS 757
>gi|66358692|ref|XP_626524.1| Ser/Thr protein kinase [Cryptosporidium parvum Iowa II]
gi|46227769|gb|EAK88689.1| Ser/Thr protein kinase [Cryptosporidium parvum Iowa II]
Length = 773
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 125/205 (60%), Gaps = 5/205 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQT-SIDLMARSYSADLRNLILYLLSV----HQK 171
+ DL ALG +ILA+ C SL + N I L + YS DL+ L+L LLS
Sbjct: 561 KQDLVALGYIILALCCGSLTIINDLNHAVEQIFLKSSLYSNDLKKLVLILLSKPALNKNN 620
Query: 172 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 231
V L M+ AR Q++ D+LENE KE++NGRLFRLL K+ TI +R +LN
Sbjct: 621 LDVFILANMLAARMIPQIEHSLKLTDALENEFRKEIDNGRLFRLLTKINTIADRTQLNAI 680
Query: 232 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 291
W+ETGDRY+ KLFR+YL Q GRP +DM HI+ L K+D GT E I LMS D S
Sbjct: 681 HKWNETGDRYICKLFREYLFQQTDSQGRPVIDMGHILDSLAKVDVGTSETITLMSSDGSS 740
Query: 292 VLVVSYAELKQCLDQSFHELSSSAS 316
+L+VS+A++K +++SF E+ ++ +
Sbjct: 741 ILLVSFADIKHSIEKSFCEIIAATT 765
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 95/143 (66%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 395
V L M+ AR Q++ D+LENE KE++NGRLFRLL K+ TI +R +LN
Sbjct: 623 VFILANMLAARMIPQIEHSLKLTDALENEFRKEIDNGRLFRLLTKINTIADRTQLNAIHK 682
Query: 396 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 455
W+ETGDRY+ KLFR+YL Q GRP +DM HI+ L K+D GT E I LMS D S+L
Sbjct: 683 WNETGDRYICKLFREYLFQQTDSQGRPVIDMGHILDSLAKVDVGTSETITLMSSDGSSIL 742
Query: 456 VVSYAELKQCLDQSFHELSSSAS 478
+VS+A++K +++SF E+ ++ +
Sbjct: 743 LVSFADIKHSIEKSFCEIIAATT 765
>gi|452986525|gb|EME86281.1| hypothetical protein MYCFIDRAFT_40108 [Pseudocercospora fijiensis
CIRAD86]
Length = 539
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 128/213 (60%), Gaps = 16/213 (7%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS--------- 167
+ DL LG+LIL + RS A Q N S++L+++SYS LR + +L++
Sbjct: 324 RKDLQDLGRLILCIAARSPSAHQ--NTHKSLELVSKSYSERLRICLAWLVAPPPLPQDVQ 381
Query: 168 -----VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 222
+ V L+ I + + D+ + D++ L E+ENGRL RLL KL I
Sbjct: 382 TQPSAKAAEYNVEALLTNIADKVVSCFDSALHYEDAVTTNLMGELENGRLVRLLTKLNVI 441
Query: 223 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 282
ERP+ + WSETG+RY LKLFRD++ HQV +GRP LD+ HI+ CLNKLDAG EKI
Sbjct: 442 LERPDTSPSAAWSETGERYYLKLFRDFVFHQVDHEGRPVLDLGHIITCLNKLDAGIDEKI 501
Query: 283 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 315
L+SRDEQSV +VSY E+K+ + ++ E++ A
Sbjct: 502 QLISRDEQSVFIVSYKEVKRGFEAAWSEITKHA 534
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 95/142 (66%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 395
V L+ I + + D+ + D++ L E+ENGRL RLL KL I ERP+ +
Sbjct: 393 VEALLTNIADKVVSCFDSALHYEDAVTTNLMGELENGRLVRLLTKLNVILERPDTSPSAA 452
Query: 396 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 455
WSETG+RY LKLFRD++ HQV +GRP LD+ HI+ CLNKLDAG EKI L+SRDEQSV
Sbjct: 453 WSETGERYYLKLFRDFVFHQVDHEGRPVLDLGHIITCLNKLDAGIDEKIQLISRDEQSVF 512
Query: 456 VVSYAELKQCLDQSFHELSSSA 477
+VSY E+K+ + ++ E++ A
Sbjct: 513 IVSYKEVKRGFEAAWSEITKHA 534
>gi|330931794|ref|XP_003303540.1| hypothetical protein PTT_15784 [Pyrenophora teres f. teres 0-1]
gi|311320404|gb|EFQ88362.1| hypothetical protein PTT_15784 [Pyrenophora teres f. teres 0-1]
Length = 860
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 136/230 (59%), Gaps = 30/230 (13%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ------- 170
DD LG+LIL + + A +Q SID + RSY+A L+ + +LL+
Sbjct: 634 DDFVQLGRLILCIANNNPTA--HLQMQKSIDYITRSYTARLKECVQWLLNPQPASGSPSS 691
Query: 171 -------KRTVVDLMPMIGARYYTQLDAVQLHG-DSLENELSKEMENGRLFRLLVKLGTI 222
++ + + I ++ + D+ +LH D+L L +E+E+ RL RLL+KL I
Sbjct: 692 PTSPVPMQKDIDTFLAGIADQFASVFDS-ELHAQDTLIVNLGRELESSRLVRLLIKLSMI 750
Query: 223 NERPEL------------NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHC 270
NERPEL N W+ETG+RY LKLFRDY+ HQV ++G P D++H++ C
Sbjct: 751 NERPELDASQNMPGNAGANSSTVWAETGERYYLKLFRDYVFHQVDQNGHPVTDLAHVLDC 810
Query: 271 LNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPK 320
LNKLDAGT EKI L+SRDEQ+VL+VSY E+K+ L+ +F +L + ++ K
Sbjct: 811 LNKLDAGTDEKIPLISRDEQNVLIVSYREVKRALESAFQDLVRAGRVSGK 860
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 107/163 (65%), Gaps = 14/163 (8%)
Query: 333 KRTVVDLMPMIGARYYTQLDAVQLHG-DSLENELSKEMENGRLFRLLVKLGTINERPEL- 390
++ + + I ++ + D+ +LH D+L L +E+E+ RL RLL+KL INERPEL
Sbjct: 699 QKDIDTFLAGIADQFASVFDS-ELHAQDTLIVNLGRELESSRLVRLLIKLSMINERPELD 757
Query: 391 -----------NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
N W+ETG+RY LKLFRDY+ HQV ++G P D++H++ CLNKLDAG
Sbjct: 758 ASQNMPGNAGANSSTVWAETGERYYLKLFRDYVFHQVDQNGHPVTDLAHVLDCLNKLDAG 817
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPK 482
T EKI L+SRDEQ+VL+VSY E+K+ L+ +F +L + ++ K
Sbjct: 818 TDEKIPLISRDEQNVLIVSYREVKRALESAFQDLVRAGRVSGK 860
>gi|212531685|ref|XP_002145999.1| poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Talaromyces marneffei ATCC 18224]
gi|210071363|gb|EEA25452.1| poly(A)-binding protein-dependent poly(A) ribonuclease, putative
[Talaromyces marneffei ATCC 18224]
Length = 457
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 125/201 (62%), Gaps = 6/201 (2%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+L+L + + A+ + +++ R YS L+N + +LL+ QK
Sbjct: 251 DLQLQDLVNFGQLMLNLGVSAAGALGSPS--KAMEHFTRVYSPQLKNSVFWLLNGLQKDQ 308
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R++ + I A+ + D+ D L ++LS+E+EN RL RL+ KL INERPE
Sbjct: 309 ERSIDIFISGISAQLISTFDSALQMDDQLTSDLSRELENARLVRLITKLNFINERPEYEH 368
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
D WSE G+RY LKLFRDY+ HQV +D+ H+++CLNKLDAG++EK+ L+SRDEQ
Sbjct: 369 DRQWSENGERYFLKLFRDYVFHQVDAQNNAVVDLGHVLNCLNKLDAGSEEKVTLISRDEQ 428
Query: 291 SVLVVSYAELKQCLDQSFHEL 311
S VVSY ELK+ L+ SF L
Sbjct: 429 SCFVVSYKELKKALESSFQAL 449
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 96/142 (67%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q+R++ + I A+ + D+ D L ++LS+E+EN RL RL+ KL INERPE
Sbjct: 308 QERSIDIFISGISAQLISTFDSALQMDDQLTSDLSRELENARLVRLITKLNFINERPEYE 367
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D WSE G+RY LKLFRDY+ HQV +D+ H+++CLNKLDAG++EK+ L+SRDE
Sbjct: 368 HDRQWSENGERYFLKLFRDYVFHQVDAQNNAVVDLGHVLNCLNKLDAGSEEKVTLISRDE 427
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
QS VVSY ELK+ L+ SF L
Sbjct: 428 QSCFVVSYKELKKALESSFQAL 449
>gi|451845432|gb|EMD58745.1| hypothetical protein COCSADRAFT_103428 [Cochliobolus sativus
ND90Pr]
Length = 844
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 131/221 (59%), Gaps = 30/221 (13%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ------- 170
DD LG+LIL + + A +Q S+D + RSY+A L+ + +LL+
Sbjct: 621 DDFVQLGRLILCIANNNPTA--HLQMQKSMDYITRSYTARLKECVQWLLNPQPPAGTPSS 678
Query: 171 -------KRTVVDLMPMIGARYYTQLDAVQLHG-DSLENELSKEMENGRLFRLLVKLGTI 222
++ + + I ++ + D+ +LH DSL L KE+E+ RL RLL+KL I
Sbjct: 679 PTSPAPLQKDIDTFLGGIADQFASVFDS-ELHAQDSLTVHLGKELESSRLVRLLIKLNMI 737
Query: 223 NERPEL------------NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHC 270
NERPEL N W+ETG+RY LKLFRDY+ HQV +G P D++HI+ C
Sbjct: 738 NERPELDASQNMPGNSGANPSSVWAETGERYYLKLFRDYVFHQVDANGHPVTDLAHILDC 797
Query: 271 LNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
LNKLDAGT E+I L+SRDEQ+VL+VSY E+K+ L+ +F +L
Sbjct: 798 LNKLDAGTDERIGLISRDEQNVLIVSYREVKRALESAFQDL 838
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 116/190 (61%), Gaps = 22/190 (11%)
Query: 298 AELKQCLDQSFH-ELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQL 356
A LK+C+ + + + +P S PL ++ + + I ++ + D+ +L
Sbjct: 657 ARLKECVQWLLNPQPPAGTPSSPTSPAPL-------QKDIDTFLGGIADQFASVFDS-EL 708
Query: 357 HG-DSLENELSKEMENGRLFRLLVKLGTINERPEL------------NLDPTWSETGDRY 403
H DSL L KE+E+ RL RLL+KL INERPEL N W+ETG+RY
Sbjct: 709 HAQDSLTVHLGKELESSRLVRLLIKLNMINERPELDASQNMPGNSGANPSSVWAETGERY 768
Query: 404 MLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELK 463
LKLFRDY+ HQV +G P D++HI+ CLNKLDAGT E+I L+SRDEQ+VL+VSY E+K
Sbjct: 769 YLKLFRDYVFHQVDANGHPVTDLAHILDCLNKLDAGTDERIGLISRDEQNVLIVSYREVK 828
Query: 464 QCLDQSFHEL 473
+ L+ +F +L
Sbjct: 829 RALESAFQDL 838
>gi|396489182|ref|XP_003843041.1| similar to pabp1-dependent poly(a)-specific ribonuclease subunit
pan3 [Leptosphaeria maculans JN3]
gi|312219619|emb|CBX99562.1| similar to pabp1-dependent poly(a)-specific ribonuclease subunit
pan3 [Leptosphaeria maculans JN3]
Length = 851
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 131/221 (59%), Gaps = 30/221 (13%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH-------- 169
DD LG+LIL + + A +Q S++ + RSY+A L+ I +LLS
Sbjct: 625 DDFVQLGRLILCIANNNASA--HLQMQKSMEYVTRSYTARLKECIQWLLSPQPVQGTPSS 682
Query: 170 ------QKRTVVDLMPMIGARYYTQLDAVQLHG-DSLENELSKEMENGRLFRLLVKLGTI 222
+ + + I ++ + D+ +LH D+L N L +E+E+ RL RLL+KL I
Sbjct: 683 PSTPTPMVKDIDTFLAGIADQFASVFDS-ELHAHDTLTNTLGRELESSRLVRLLIKLNMI 741
Query: 223 NERPELNLD------------PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHC 270
NERPEL+ W+ETG+RY LKLFRDY+ HQV +G P D++H++ C
Sbjct: 742 NERPELDASQHVPGSTASGASSVWAETGERYYLKLFRDYVFHQVDANGHPVTDLAHVLDC 801
Query: 271 LNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
LNKLDAGT EKI L+SRDEQ+VL+VSY E+K+ L+ SF +L
Sbjct: 802 LNKLDAGTDEKIALISRDEQNVLIVSYREVKRGLESSFQDL 842
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/144 (50%), Positives = 99/144 (68%), Gaps = 14/144 (9%)
Query: 343 IGARYYTQLDAVQLHG-DSLENELSKEMENGRLFRLLVKLGTINERPELNLD-------- 393
I ++ + D+ +LH D+L N L +E+E+ RL RLL+KL INERPEL+
Sbjct: 700 IADQFASVFDS-ELHAHDTLTNTLGRELESSRLVRLLIKLNMINERPELDASQHVPGSTA 758
Query: 394 ----PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSR 449
W+ETG+RY LKLFRDY+ HQV +G P D++H++ CLNKLDAGT EKI L+SR
Sbjct: 759 SGASSVWAETGERYYLKLFRDYVFHQVDANGHPVTDLAHVLDCLNKLDAGTDEKIALISR 818
Query: 450 DEQSVLVVSYAELKQCLDQSFHEL 473
DEQ+VL+VSY E+K+ L+ SF +L
Sbjct: 819 DEQNVLIVSYREVKRGLESSFQDL 842
>gi|328850240|gb|EGF99407.1| hypothetical protein MELLADRAFT_40296 [Melampsora larici-populina
98AG31]
Length = 493
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 122/190 (64%), Gaps = 6/190 (3%)
Query: 117 QDDLTALGKLILAM-TCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL---SVHQK- 171
+ DL LGKLI ++ + + L +I+ M + +S+DL +I YLL S Q
Sbjct: 278 EQDLIDLGKLICSIGSSIDCSSPNGHVLVQAIEYMQQFFSSDLHEVIKYLLKPPSSEQSM 337
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
R++ M +I ++ ++ V H D +E L +E+ENGRL RL+ K G INERPE +
Sbjct: 338 SRSIEGFMQLIWSKTLDEVTNVFNHNDLMEEYLMRELENGRLVRLMAKFGFINERPEFDH 397
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
DP WSET +RY+LKLFRDY+ HQV G+P D+SH++ CLNKLDAG EKI L+SRDEQ
Sbjct: 398 DPNWSETSERYVLKLFRDYVFHQVDAQGKPVTDLSHVLTCLNKLDAGLDEKIMLVSRDEQ 457
Query: 291 SVLVVSYAEL 300
+ +VSYAE+
Sbjct: 458 TCAIVSYAEV 467
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 105/171 (61%), Gaps = 7/171 (4%)
Query: 292 VLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQL 351
VLV + ++Q HE+ P S + R++ M +I ++ ++
Sbjct: 304 VLVQAIEYMQQFFSSDLHEVIKYLLKPPSSEQSM-------SRSIEGFMQLIWSKTLDEV 356
Query: 352 DAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDY 411
V H D +E L +E+ENGRL RL+ K G INERPE + DP WSET +RY+LKLFRDY
Sbjct: 357 TNVFNHNDLMEEYLMRELENGRLVRLMAKFGFINERPEFDHDPNWSETSERYVLKLFRDY 416
Query: 412 LLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAEL 462
+ HQV G+P D+SH++ CLNKLDAG EKI L+SRDEQ+ +VSYAE+
Sbjct: 417 VFHQVDAQGKPVTDLSHVLTCLNKLDAGLDEKIMLVSRDEQTCAIVSYAEV 467
>gi|452002345|gb|EMD94803.1| hypothetical protein COCHEDRAFT_1091591 [Cochliobolus
heterostrophus C5]
Length = 844
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 131/221 (59%), Gaps = 30/221 (13%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ------- 170
DD LG+LIL + + A +Q S+D + RSY+A L+ + +LL+
Sbjct: 621 DDFVQLGRLILCIANSNPTA--HLQMQKSMDYITRSYTARLKECVQWLLNPQPPAGTPSS 678
Query: 171 -------KRTVVDLMPMIGARYYTQLDAVQLHG-DSLENELSKEMENGRLFRLLVKLGTI 222
++ + + I ++ + D+ +LH DSL L +E+E+ RL RLL+KL I
Sbjct: 679 PTSPAPLQKDIDTFLGGIADQFASVFDS-ELHAQDSLTVHLGRELESSRLVRLLIKLNMI 737
Query: 223 NERPEL------------NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHC 270
NERPEL N W+ETG+RY LKLFRDY+ HQV +G P D++HI+ C
Sbjct: 738 NERPELDASQNMPGNSGTNPSSVWAETGERYYLKLFRDYVFHQVDANGHPVTDLAHILDC 797
Query: 271 LNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
LNKLDAGT E+I L+SRDEQ+VL+VSY E+K+ L+ +F +L
Sbjct: 798 LNKLDAGTDERIGLISRDEQNVLIVSYREVKRALESAFQDL 838
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 116/190 (61%), Gaps = 22/190 (11%)
Query: 298 AELKQCLDQSFH-ELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQL 356
A LK+C+ + + + +P S PL ++ + + I ++ + D+ +L
Sbjct: 657 ARLKECVQWLLNPQPPAGTPSSPTSPAPL-------QKDIDTFLGGIADQFASVFDS-EL 708
Query: 357 HG-DSLENELSKEMENGRLFRLLVKLGTINERPEL------------NLDPTWSETGDRY 403
H DSL L +E+E+ RL RLL+KL INERPEL N W+ETG+RY
Sbjct: 709 HAQDSLTVHLGRELESSRLVRLLIKLNMINERPELDASQNMPGNSGTNPSSVWAETGERY 768
Query: 404 MLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELK 463
LKLFRDY+ HQV +G P D++HI+ CLNKLDAGT E+I L+SRDEQ+VL+VSY E+K
Sbjct: 769 YLKLFRDYVFHQVDANGHPVTDLAHILDCLNKLDAGTDERIGLISRDEQNVLIVSYREVK 828
Query: 464 QCLDQSFHEL 473
+ L+ +F +L
Sbjct: 829 RALESAFQDL 838
>gi|315043416|ref|XP_003171084.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Arthroderma gypseum CBS 118893]
gi|311344873|gb|EFR04076.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Arthroderma gypseum CBS 118893]
Length = 664
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 15/208 (7%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV----- 168
DLQ +D+ G+L+L + SL N +++ +R+YSA L N + +LL
Sbjct: 457 DLQSNDMVNFGQLMLTLGASSLA----HNPTKALEHFSRAYSAQLYNSVFWLLGAGPSKD 512
Query: 169 -----HQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 223
RT+ + I ++ + D+ D L ++LS+E+EN RL RLL KL I
Sbjct: 513 PQNQAATDRTIDVFITGISSQLISTFDSSLHVDDELTHDLSRELENARLVRLLTKLNFIT 572
Query: 224 ERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKIC 283
ERPE + D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG++EK+
Sbjct: 573 ERPEYDHDRHWSENGERYFLKLFRDYVFHQVDGQNAPVVDLGHVLTCLNKLDAGSEEKVT 632
Query: 284 LMSRDEQSVLVVSYAELKQCLDQSFHEL 311
L+SRDEQS VVSY ELK+ ++ SF L
Sbjct: 633 LISRDEQSCFVVSYKELKKGVEMSFQAL 660
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 94/140 (67%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
RT+ + I ++ + D+ D L ++LS+E+EN RL RLL KL I ERPE + D
Sbjct: 521 RTIDVFITGISSQLISTFDSSLHVDDELTHDLSRELENARLVRLLTKLNFITERPEYDHD 580
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG++EK+ L+SRDEQS
Sbjct: 581 RHWSENGERYFLKLFRDYVFHQVDGQNAPVVDLGHVLTCLNKLDAGSEEKVTLISRDEQS 640
Query: 454 VLVVSYAELKQCLDQSFHEL 473
VVSY ELK+ ++ SF L
Sbjct: 641 CFVVSYKELKKGVEMSFQAL 660
>gi|189208688|ref|XP_001940677.1| PABP-dependent poly(A) nuclease 3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976770|gb|EDU43396.1| PABP-dependent poly(A) nuclease 3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 854
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 132/221 (59%), Gaps = 30/221 (13%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ------- 170
DD LG+LIL + + A +Q SID + RSY+A L+ + +LL+
Sbjct: 628 DDFIQLGRLILCIANNNPTA--HLQMQKSIDYITRSYTARLKECVQWLLNPQPSSGSPSS 685
Query: 171 -------KRTVVDLMPMIGARYYTQLDAVQLHG-DSLENELSKEMENGRLFRLLVKLGTI 222
++ + + I ++ + D+ +LH D+L L +E+E+ RL RLL+KL I
Sbjct: 686 PTSPVPMQKDIDTFLAGIADQFASVFDS-ELHAQDTLIVNLGRELESSRLVRLLIKLSMI 744
Query: 223 NERPELNLD------------PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHC 270
NERPEL+ W+ETG+RY LKLFRDY+ HQV ++G P D++H++ C
Sbjct: 745 NERPELDASQNMPGNAGASSSTVWAETGERYYLKLFRDYVFHQVDQNGHPVTDLAHVLDC 804
Query: 271 LNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
LNKLDAGT EKI L+SRDEQ+VL+VSY E+K+ L+ +F +L
Sbjct: 805 LNKLDAGTDEKIPLISRDEQNVLIVSYREVKRALESAFQDL 845
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 103/154 (66%), Gaps = 14/154 (9%)
Query: 333 KRTVVDLMPMIGARYYTQLDAVQLHG-DSLENELSKEMENGRLFRLLVKLGTINERPELN 391
++ + + I ++ + D+ +LH D+L L +E+E+ RL RLL+KL INERPEL+
Sbjct: 693 QKDIDTFLAGIADQFASVFDS-ELHAQDTLIVNLGRELESSRLVRLLIKLSMINERPELD 751
Query: 392 LD------------PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
W+ETG+RY LKLFRDY+ HQV ++G P D++H++ CLNKLDAG
Sbjct: 752 ASQNMPGNAGASSSTVWAETGERYYLKLFRDYVFHQVDQNGHPVTDLAHVLDCLNKLDAG 811
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
T EKI L+SRDEQ+VL+VSY E+K+ L+ +F +L
Sbjct: 812 TDEKIPLISRDEQNVLIVSYREVKRALESAFQDL 845
>gi|116193793|ref|XP_001222709.1| hypothetical protein CHGG_06614 [Chaetomium globosum CBS 148.51]
gi|88182527|gb|EAQ89995.1| hypothetical protein CHGG_06614 [Chaetomium globosum CBS 148.51]
Length = 671
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 126/201 (62%), Gaps = 4/201 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH---QKRT 173
Q+DL GKLILA+ + A N+Q ++D + YSA+L++ + +L++ + ++
Sbjct: 296 QEDLVKFGKLILALATGAPPA-HLNNIQVALDSLVTKYSANLKDAVAWLIAPSNPGESKS 354
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + + I D GD + L++E+ENGR+ R ++KL TI ER E +
Sbjct: 355 IENFISGIATHMTAFFDLALQDGDEKQFHLARELENGRIARSMMKLMTIIERAEPGGAQS 414
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETG+RY LKLFRDY+ H+V+ DG+P L + H++ CL+KLDAG E + L SRD ++V
Sbjct: 415 WSETGERYQLKLFRDYVFHRVEADGKPNLAVGHMLSCLSKLDAGIDEMVVLTSRDNETVF 474
Query: 294 VVSYAELKQCLDQSFHELSSS 314
V+SY ELKQ D++F+EL +
Sbjct: 475 VLSYRELKQMFDRAFNELGGT 495
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 94/145 (64%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+ +++ + + I D GD + L++E+ENGR+ R ++KL TI ER E
Sbjct: 351 ESKSIENFISGIATHMTAFFDLALQDGDEKQFHLARELENGRIARSMMKLMTIIERAEPG 410
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
+WSETG+RY LKLFRDY+ H+V+ DG+P L + H++ CL+KLDAG E + L SRD
Sbjct: 411 GAQSWSETGERYQLKLFRDYVFHRVEADGKPNLAVGHMLSCLSKLDAGIDEMVVLTSRDN 470
Query: 452 QSVLVVSYAELKQCLDQSFHELSSS 476
++V V+SY ELKQ D++F+EL +
Sbjct: 471 ETVFVLSYRELKQMFDRAFNELGGT 495
>gi|50548705|ref|XP_501822.1| YALI0C14256p [Yarrowia lipolytica]
gi|74604416|sp|Q6CBZ0.1|PAN3_YARLI RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|49647689|emb|CAG82133.1| YALI0C14256p [Yarrowia lipolytica CLIB122]
Length = 670
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 129/201 (64%), Gaps = 16/201 (7%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT--- 173
Q DL LG L+L + C S+ A + N++ S+ + ++L+ ++ YLLS + +T
Sbjct: 479 QQDLRNLGLLVLCLACNSVEATK--NVEQSLTRL----DSELQEIVQYLLSSNTSKTASR 532
Query: 174 -VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP--ELNL 230
+ L P++ A + L+ DSLE+EL +E+ENGRL RL+ KL I ERP + +
Sbjct: 533 VLASLTPLLTATFNESLNT----NDSLEHELRRELENGRLVRLMAKLNFITERPGPDPEM 588
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
WSETGDRY++KLFRDY+ HQ E G+P +D+ H+V LNKLDAG E+I L+SR+ Q
Sbjct: 589 SQQWSETGDRYLIKLFRDYVFHQQDEMGKPVMDLGHVVRTLNKLDAGIDERITLISRNGQ 648
Query: 291 SVLVVSYAELKQCLDQSFHEL 311
+ L+VS+ +LKQC++ + +L
Sbjct: 649 NCLIVSFKDLKQCIESALRDL 669
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 103/154 (66%), Gaps = 10/154 (6%)
Query: 326 YLLSVHQKRT----VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
YLLS + +T + L P++ A + L+ DSLE+EL +E+ENGRL RL+ KL
Sbjct: 520 YLLSSNTSKTASRVLASLTPLLTATFNESLNT----NDSLEHELRRELENGRLVRLMAKL 575
Query: 382 GTINERP--ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
I ERP + + WSETGDRY++KLFRDY+ HQ E G+P +D+ H+V LNKLDAG
Sbjct: 576 NFITERPGPDPEMSQQWSETGDRYLIKLFRDYVFHQQDEMGKPVMDLGHVVRTLNKLDAG 635
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
E+I L+SR+ Q+ L+VS+ +LKQC++ + +L
Sbjct: 636 IDERITLISRNGQNCLIVSFKDLKQCIESALRDL 669
>gi|327294918|ref|XP_003232154.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Trichophyton rubrum CBS 118892]
gi|326465326|gb|EGD90779.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Trichophyton rubrum CBS 118892]
Length = 679
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 125/223 (56%), Gaps = 30/223 (13%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH---- 169
DLQ +D+ + G+LIL + SL N +++ +R+YSA L N +L+LL
Sbjct: 457 DLQSNDMVSFGQLILTLGASSLA----HNPTKALEHFSRAYSAQLYNSVLWLLGAGPSKD 512
Query: 170 ---------------------QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEME 208
RT+ + I + + D+ D L ++LS+E+E
Sbjct: 513 PQGQAQAANQSQNANSNSNQGSDRTIDVFITGISTQLISTFDSSLHVDDELTHDLSRELE 572
Query: 209 NGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIV 268
N RL RLL KL I ERPE + D WSE G+RY LKLFRDY+ HQV P +D+ H++
Sbjct: 573 NARLVRLLTKLNFITERPEYDHDRHWSENGERYFLKLFRDYVFHQVDSQNAPVVDLGHVL 632
Query: 269 HCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
CLNKLDAG++EK+ L+SRDEQS VVSY ELK+ ++ SF L
Sbjct: 633 TCLNKLDAGSEEKVTLISRDEQSCFVVSYKELKKGVEMSFQAL 675
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 93/140 (66%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
RT+ + I + + D+ D L ++LS+E+EN RL RLL KL I ERPE + D
Sbjct: 536 RTIDVFITGISTQLISTFDSSLHVDDELTHDLSRELENARLVRLLTKLNFITERPEYDHD 595
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG++EK+ L+SRDEQS
Sbjct: 596 RHWSENGERYFLKLFRDYVFHQVDSQNAPVVDLGHVLTCLNKLDAGSEEKVTLISRDEQS 655
Query: 454 VLVVSYAELKQCLDQSFHEL 473
VVSY ELK+ ++ SF L
Sbjct: 656 CFVVSYKELKKGVEMSFQAL 675
>gi|296808561|ref|XP_002844619.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Arthroderma otae CBS 113480]
gi|238844102|gb|EEQ33764.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Arthroderma otae CBS 113480]
Length = 544
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 14/207 (6%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH---- 169
DLQ +D+ + G+LIL + SL N +++ +R+YS L N + +LL
Sbjct: 338 DLQSNDMVSFGQLILTLGASSLA----HNPTKALEHFSRAYSPQLYNSVFWLLGAGPSKD 393
Query: 170 -----QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINE 224
R++ + I ++ + D+ D L +LS+E+EN RL RLL KL I E
Sbjct: 394 PQHPPTDRSIDVFITGISSQLISTFDSSLHVDDELTYDLSRELENARLVRLLTKLNFITE 453
Query: 225 RPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICL 284
RPE + D WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG+ EK+ L
Sbjct: 454 RPEYDHDRHWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGSDEKVTL 513
Query: 285 MSRDEQSVLVVSYAELKQCLDQSFHEL 311
+SRDEQS VVSY ELK+ ++ SF L
Sbjct: 514 ISRDEQSCFVVSYKELKKGVEMSFQAL 540
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 92/140 (65%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
R++ + I ++ + D+ D L +LS+E+EN RL RLL KL I ERPE + D
Sbjct: 401 RSIDVFITGISSQLISTFDSSLHVDDELTYDLSRELENARLVRLLTKLNFITERPEYDHD 460
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG+ EK+ L+SRDEQS
Sbjct: 461 RHWSENGERYFLKLFRDYVFHQVDAQNAPVVDLGHVLTCLNKLDAGSDEKVTLISRDEQS 520
Query: 454 VLVVSYAELKQCLDQSFHEL 473
VVSY ELK+ ++ SF L
Sbjct: 521 CFVVSYKELKKGVEMSFQAL 540
>gi|158564257|sp|Q2H401.2|PAN3_CHAGB RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
Length = 648
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 125/198 (63%), Gaps = 4/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH---QKRT 173
Q+DL GKLILA+ + A N+Q ++D + YSA+L++ + +L++ + ++
Sbjct: 439 QEDLVKFGKLILALATGAPPA-HLNNIQVALDSLVTKYSANLKDAVAWLIAPSNPGESKS 497
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + + I D GD + L++E+ENGR+ R ++KL TI ER E +
Sbjct: 498 IENFISGIATHMTAFFDLALQDGDEKQFHLARELENGRIARSMMKLMTIIERAEPGGAQS 557
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETG+RY LKLFRDY+ H+V+ DG+P L + H++ CL+KLDAG E + L SRD ++V
Sbjct: 558 WSETGERYQLKLFRDYVFHRVEADGKPNLAVGHMLSCLSKLDAGIDEMVVLTSRDNETVF 617
Query: 294 VVSYAELKQCLDQSFHEL 311
V+SY ELKQ D++F+EL
Sbjct: 618 VLSYRELKQMFDRAFNEL 635
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 93/142 (65%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+ +++ + + I D GD + L++E+ENGR+ R ++KL TI ER E
Sbjct: 494 ESKSIENFISGIATHMTAFFDLALQDGDEKQFHLARELENGRIARSMMKLMTIIERAEPG 553
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
+WSETG+RY LKLFRDY+ H+V+ DG+P L + H++ CL+KLDAG E + L SRD
Sbjct: 554 GAQSWSETGERYQLKLFRDYVFHRVEADGKPNLAVGHMLSCLSKLDAGIDEMVVLTSRDN 613
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
++V V+SY ELKQ D++F+EL
Sbjct: 614 ETVFVLSYRELKQMFDRAFNEL 635
>gi|367021902|ref|XP_003660236.1| hypothetical protein MYCTH_2298287 [Myceliophthora thermophila ATCC
42464]
gi|347007503|gb|AEO54991.1| hypothetical protein MYCTH_2298287 [Myceliophthora thermophila ATCC
42464]
Length = 636
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 123/198 (62%), Gaps = 4/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV---HQKRT 173
Q+DL GKLIL++T +L A N+ +++ + YSA+L++ + +L++ + ++
Sbjct: 427 QEDLVKFGKLILSLTTNTLPA-HLNNIPAALESLGAKYSANLKDAVAWLVTPPNPGEPKS 485
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ + I T D D + L++E+ENGR R+++KL TI ER EL
Sbjct: 486 IEHFISGIATHMTTFFDLALQDNDEKQFHLARELENGRAARIMMKLMTIVERGELGGAQA 545
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETGDRY LKLFRDY+ H+V DG+P L + H++ CLNKLDA E + L SRD ++V
Sbjct: 546 WSETGDRYQLKLFRDYVFHRVDADGKPNLSIGHMLSCLNKLDAAIDEMVVLTSRDNETVF 605
Query: 294 VVSYAELKQCLDQSFHEL 311
V++Y ELKQ D++F+EL
Sbjct: 606 VLTYRELKQMFDRAFNEL 623
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 90/142 (63%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+ +++ + I T D D + L++E+ENGR R+++KL TI ER EL
Sbjct: 482 EPKSIEHFISGIATHMTTFFDLALQDNDEKQFHLARELENGRAARIMMKLMTIVERGELG 541
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
WSETGDRY LKLFRDY+ H+V DG+P L + H++ CLNKLDA E + L SRD
Sbjct: 542 GAQAWSETGDRYQLKLFRDYVFHRVDADGKPNLSIGHMLSCLNKLDAAIDEMVVLTSRDN 601
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
++V V++Y ELKQ D++F+EL
Sbjct: 602 ETVFVLTYRELKQMFDRAFNEL 623
>gi|340975578|gb|EGS22693.1| pab-dependent poly(A)-specific ribonuclease subunit pan3-like
protein [Chaetomium thermophilum var. thermophilum DSM
1495]
Length = 566
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 127/201 (63%), Gaps = 3/201 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL--SVHQKRTV 174
Q+D GKLIL++ +L A N+ +++ + YSA+L++ + +LL S + +T+
Sbjct: 358 QEDFVKFGKLILSLATGTLPA-HLNNIPAALETLGNKYSANLKSAVNWLLDTSSGETKTI 416
Query: 175 VDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
M I ++ T D D L++E+ENGR+ R L+KL TI ER + + P+W
Sbjct: 417 EHFMTGIASQMTTFFDLALQDNDEKLFHLAREVENGRIARSLMKLLTILERGDYDGVPSW 476
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
SETGDRY LKLFRDY+ H+V DG+P L + H++ C++KL+AG E I L SRD ++V V
Sbjct: 477 SETGDRYQLKLFRDYVFHRVDADGKPNLSIGHMLTCMSKLEAGVDENILLTSRDNETVFV 536
Query: 295 VSYAELKQCLDQSFHELSSSA 315
+SY EL+Q D++F+EL ++
Sbjct: 537 LSYRELRQMYDRAFNELVKAS 557
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 97/149 (65%)
Query: 329 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 388
S + +T+ M I ++ T D D L++E+ENGR+ R L+KL TI ER
Sbjct: 409 SSGETKTIEHFMTGIASQMTTFFDLALQDNDEKLFHLAREVENGRIARSLMKLLTILERG 468
Query: 389 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 448
+ + P+WSETGDRY LKLFRDY+ H+V DG+P L + H++ C++KL+AG E I L S
Sbjct: 469 DYDGVPSWSETGDRYQLKLFRDYVFHRVDADGKPNLSIGHMLTCMSKLEAGVDENILLTS 528
Query: 449 RDEQSVLVVSYAELKQCLDQSFHELSSSA 477
RD ++V V+SY EL+Q D++F+EL ++
Sbjct: 529 RDNETVFVLSYRELRQMYDRAFNELVKAS 557
>gi|158564136|sp|Q0V0I4.2|PAN3_PHANO RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
Length = 669
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 131/221 (59%), Gaps = 30/221 (13%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS---------- 167
DD LG++IL + + A +Q S+D + R+Y+A L+ I +LL+
Sbjct: 443 DDFVQLGRMILCIANNNTTA--HLQMQKSMDHVTRNYTARLKECIQWLLNPQPPLGTPSS 500
Query: 168 ----VHQKRTVVDLMPMIGARYYTQLDAVQLHG-DSLENELSKEMENGRLFRLLVKLGTI 222
+ + + + I + + D+ +LH D+L N L +E+E+ R+ RLLVKL +
Sbjct: 501 PTTPAPGSKDIDNFLGGISDQLASVFDS-ELHAQDTLTNTLGRELESSRIVRLLVKLNMV 559
Query: 223 NERPEL------------NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHC 270
NERPEL N W+ETG+RY LKLFRDY+ HQV +G P D++H++ C
Sbjct: 560 NERPELDASQQMSGGNTSNPSSVWAETGERYYLKLFRDYVFHQVDANGHPVTDLAHVLDC 619
Query: 271 LNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
LNKLDAGT EKI L+SRDEQ+VL+VS+ E+K+ L+ +F +L
Sbjct: 620 LNKLDAGTDEKIALISRDEQNVLIVSFREVKRGLEIAFQDL 660
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 93/132 (70%), Gaps = 13/132 (9%)
Query: 355 QLHG-DSLENELSKEMENGRLFRLLVKLGTINERPEL------------NLDPTWSETGD 401
+LH D+L N L +E+E+ R+ RLLVKL +NERPEL N W+ETG+
Sbjct: 529 ELHAQDTLTNTLGRELESSRIVRLLVKLNMVNERPELDASQQMSGGNTSNPSSVWAETGE 588
Query: 402 RYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAE 461
RY LKLFRDY+ HQV +G P D++H++ CLNKLDAGT EKI L+SRDEQ+VL+VS+ E
Sbjct: 589 RYYLKLFRDYVFHQVDANGHPVTDLAHVLDCLNKLDAGTDEKIALISRDEQNVLIVSFRE 648
Query: 462 LKQCLDQSFHEL 473
+K+ L+ +F +L
Sbjct: 649 VKRGLEIAFQDL 660
>gi|302499672|ref|XP_003011831.1| hypothetical protein ARB_01810 [Arthroderma benhamiae CBS 112371]
gi|291175385|gb|EFE31191.1| hypothetical protein ARB_01810 [Arthroderma benhamiae CBS 112371]
Length = 593
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 125/227 (55%), Gaps = 34/227 (14%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH---- 169
DLQ +D+ + G+LIL + SL N +++ +R+YSA L N +L+LL
Sbjct: 318 DLQSNDMVSFGQLILTLGASSLA----HNPTKALEHFSRAYSAQLYNSVLWLLGAGPSKE 373
Query: 170 -------------------------QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELS 204
RT+ + I + + D+ D L ++LS
Sbjct: 374 PQGQLQPANQSQNHNANANQNANQGSDRTIDVFITGISTQLISTFDSSLHVDDELTHDLS 433
Query: 205 KEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDM 264
+E+EN RL RLL KL I ERPE + D WSE G+RY LKLFRDY+ HQV P +D+
Sbjct: 434 RELENARLVRLLTKLNFITERPEYDHDRHWSENGERYFLKLFRDYVFHQVDSQNAPVVDL 493
Query: 265 SHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
H++ CLNKLDAG++EK+ L+SRDEQS VVSY ELK+ ++ SF L
Sbjct: 494 GHVLTCLNKLDAGSEEKVTLISRDEQSCFVVSYKELKKGVEMSFQAL 540
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 93/140 (66%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
RT+ + I + + D+ D L ++LS+E+EN RL RLL KL I ERPE + D
Sbjct: 401 RTIDVFITGISTQLISTFDSSLHVDDELTHDLSRELENARLVRLLTKLNFITERPEYDHD 460
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG++EK+ L+SRDEQS
Sbjct: 461 RHWSENGERYFLKLFRDYVFHQVDSQNAPVVDLGHVLTCLNKLDAGSEEKVTLISRDEQS 520
Query: 454 VLVVSYAELKQCLDQSFHEL 473
VVSY ELK+ ++ SF L
Sbjct: 521 CFVVSYKELKKGVEMSFQAL 540
>gi|326481893|gb|EGE05903.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Trichophyton equinum CBS 127.97]
Length = 644
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 125/231 (54%), Gaps = 38/231 (16%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH---- 169
DLQ +D+ + G+LIL + SL N +++ +R+YSA L N +L+LL
Sbjct: 414 DLQGNDMVSFGQLILTLGASSLA----HNPTKALEHFSRAYSAQLYNSVLWLLGAGPSKE 469
Query: 170 -----------------------------QKRTVVDLMPMIGARYYTQLDAVQLHGDSLE 200
RT+ + I + + D+ D L
Sbjct: 470 PQGQPQPANASQNPNPNANANANQNANQVSDRTIDVFITGISTQLISTFDSSLHVDDELT 529
Query: 201 NELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRP 260
++LS+E+EN RL RLL KL I ERPE + D WSE G+RY LKLFRDY+ HQV P
Sbjct: 530 HDLSRELENARLVRLLTKLNFITERPEYDHDRHWSENGERYFLKLFRDYVFHQVDSQNAP 589
Query: 261 WLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
+D+ H++ CLNKLDAG++EK+ L+SRDEQS VVSY ELK+ ++ SF L
Sbjct: 590 VVDLGHVLTCLNKLDAGSEEKVTLISRDEQSCFVVSYKELKKGVEMSFQAL 640
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 93/140 (66%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
RT+ + I + + D+ D L ++LS+E+EN RL RLL KL I ERPE + D
Sbjct: 501 RTIDVFITGISTQLISTFDSSLHVDDELTHDLSRELENARLVRLLTKLNFITERPEYDHD 560
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG++EK+ L+SRDEQS
Sbjct: 561 RHWSENGERYFLKLFRDYVFHQVDSQNAPVVDLGHVLTCLNKLDAGSEEKVTLISRDEQS 620
Query: 454 VLVVSYAELKQCLDQSFHEL 473
VVSY ELK+ ++ SF L
Sbjct: 621 CFVVSYKELKKGVEMSFQAL 640
>gi|302655549|ref|XP_003019561.1| hypothetical protein TRV_06435 [Trichophyton verrucosum HKI 0517]
gi|291183293|gb|EFE38916.1| hypothetical protein TRV_06435 [Trichophyton verrucosum HKI 0517]
Length = 798
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 125/227 (55%), Gaps = 34/227 (14%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH---- 169
DLQ +D+ + G+LIL + SL N +++ +R+YSA L N +L+LL
Sbjct: 525 DLQSNDMVSFGQLILTLGASSLA----HNPTKALEHFSRAYSAQLYNSVLWLLGAGPSKE 580
Query: 170 -------------------------QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELS 204
RT+ + I + + D+ D L ++LS
Sbjct: 581 PQGQLQPANQSQNPNANANPNANQGSDRTIDVFITGISTQLISTFDSSLHVDDELTHDLS 640
Query: 205 KEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDM 264
+E+EN RL RLL KL I ERPE + D WSE G+RY LKLFRDY+ HQV P +D+
Sbjct: 641 RELENARLVRLLTKLNFITERPEYDHDRHWSENGERYFLKLFRDYVFHQVDSQNAPVVDL 700
Query: 265 SHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
H++ CLNKLDAG++EK+ L+SRDEQS VVSY ELK+ ++ SF L
Sbjct: 701 GHVLTCLNKLDAGSEEKVTLISRDEQSCFVVSYKELKKGVEMSFQAL 747
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 93/140 (66%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
RT+ + I + + D+ D L ++LS+E+EN RL RLL KL I ERPE + D
Sbjct: 608 RTIDVFITGISTQLISTFDSSLHVDDELTHDLSRELENARLVRLLTKLNFITERPEYDHD 667
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG++EK+ L+SRDEQS
Sbjct: 668 RHWSENGERYFLKLFRDYVFHQVDSQNAPVVDLGHVLTCLNKLDAGSEEKVTLISRDEQS 727
Query: 454 VLVVSYAELKQCLDQSFHEL 473
VVSY ELK+ ++ SF L
Sbjct: 728 CFVVSYKELKKGVEMSFQAL 747
>gi|326473411|gb|EGD97420.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Trichophyton tonsurans CBS 112818]
Length = 687
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 125/231 (54%), Gaps = 38/231 (16%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH---- 169
DLQ +D+ + G+LIL + SL N +++ +R+YSA L N +L+LL
Sbjct: 457 DLQSNDMVSFGQLILTLGASSLA----HNPTKALEHFSRAYSAQLYNSVLWLLGAGPSKE 512
Query: 170 -----------------------------QKRTVVDLMPMIGARYYTQLDAVQLHGDSLE 200
RT+ + I + + D+ D L
Sbjct: 513 PQGQPQPANASQNPNPNANANANQNANQVSDRTIDVFITGISTQLISTFDSSLHVDDELT 572
Query: 201 NELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRP 260
++LS+E+EN RL RLL KL I ERPE + D WSE G+RY LKLFRDY+ HQV P
Sbjct: 573 HDLSRELENARLVRLLTKLNFITERPEYDHDRHWSENGERYFLKLFRDYVFHQVDSQNAP 632
Query: 261 WLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
+D+ H++ CLNKLDAG++EK+ L+SRDEQS VVSY ELK+ ++ SF L
Sbjct: 633 VVDLGHVLTCLNKLDAGSEEKVTLISRDEQSCFVVSYKELKKGVEMSFQAL 683
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 93/140 (66%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 393
RT+ + I + + D+ D L ++LS+E+EN RL RLL KL I ERPE + D
Sbjct: 544 RTIDVFITGISTQLISTFDSSLHVDDELTHDLSRELENARLVRLLTKLNFITERPEYDHD 603
Query: 394 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 453
WSE G+RY LKLFRDY+ HQV P +D+ H++ CLNKLDAG++EK+ L+SRDEQS
Sbjct: 604 RHWSENGERYFLKLFRDYVFHQVDSQNAPVVDLGHVLTCLNKLDAGSEEKVTLISRDEQS 663
Query: 454 VLVVSYAELKQCLDQSFHEL 473
VVSY ELK+ ++ SF L
Sbjct: 664 CFVVSYKELKKGVEMSFQAL 683
>gi|156031096|ref|XP_001584873.1| hypothetical protein SS1G_14156 [Sclerotinia sclerotiorum 1980]
gi|154700547|gb|EDO00286.1| hypothetical protein SS1G_14156 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 842
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 129/200 (64%), Gaps = 6/200 (3%)
Query: 118 DDLTALGKLILAM-TCRSLMAVQR--ENLQTSIDLMARSYSADLRNLILYLL---SVHQK 171
+DL G L+L++ T + + Q + L+T+++ ++R YS +L + I +LL S +
Sbjct: 636 EDLCLFGVLMLSLATVNATITPQTTAQVLKTNLEGLSRFYSVELIDTIRWLLTTPSTTEP 695
Query: 172 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 231
+ + M I R T LD+ D + +EL +E+ENGRL RL+ KLG INERPE + +
Sbjct: 696 KDLETFMRGISGRMTTALDSSLQAHDEITSELYRELENGRLVRLMAKLGNINERPEYDTN 755
Query: 232 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 291
WSE G+RY+LKLFRDY+ H V DGRP DM+ I+ CLNKLDAG+ EKI L SRD ++
Sbjct: 756 VQWSEVGERYILKLFRDYVFHPVDADGRPVTDMAWILKCLNKLDAGSDEKIQLTSRDGEN 815
Query: 292 VLVVSYAELKQCLDQSFHEL 311
+VS+ ++K+ ++ ++ +L
Sbjct: 816 CFIVSFKDIKKQVNAAWGDL 835
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 97/145 (66%)
Query: 329 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 388
S + + + M I R T LD+ D + +EL +E+ENGRL RL+ KLG INERP
Sbjct: 691 STTEPKDLETFMRGISGRMTTALDSSLQAHDEITSELYRELENGRLVRLMAKLGNINERP 750
Query: 389 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 448
E + + WSE G+RY+LKLFRDY+ H V DGRP DM+ I+ CLNKLDAG+ EKI L S
Sbjct: 751 EYDTNVQWSEVGERYILKLFRDYVFHPVDADGRPVTDMAWILKCLNKLDAGSDEKIQLTS 810
Query: 449 RDEQSVLVVSYAELKQCLDQSFHEL 473
RD ++ +VS+ ++K+ ++ ++ +L
Sbjct: 811 RDGENCFIVSFKDIKKQVNAAWGDL 835
>gi|256082862|ref|XP_002577671.1| hypothetical protein [Schistosoma mansoni]
gi|353231930|emb|CCD79285.1| hypothetical protein Smp_064020.5 [Schistosoma mansoni]
Length = 677
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDL 177
DD LGKL++ + C ++ AVQ +S +L+ R+Y +L LI L+S Q L
Sbjct: 452 DDFIQLGKLMIGVACGTVAAVQASQRASSFNLLQRAYRPELVTLIRSLVS-GQISGADQL 510
Query: 178 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSET 237
M + L + H D LE++L E+E RLFRL+ KL +I ER + P WSET
Sbjct: 511 MRATAPFAFDHLTRLYDHSDLLESQLLLELECDRLFRLICKLQSIVERCDQGTSPEWSET 570
Query: 238 GDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 297
GDRYMLKLFRD++ HQ G P+LD++HI+ LNK++A + E++CL+SRD Q+V++V+Y
Sbjct: 571 GDRYMLKLFRDFVFHQSDPLGAPYLDLAHIITTLNKVEAASPERLCLVSRDSQNVIIVTY 630
Query: 298 AELKQCLDQSFHEL 311
A++KQ LD SF L
Sbjct: 631 ADIKQWLDTSFSYL 644
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 87/117 (74%)
Query: 357 HGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQV 416
H D LE++L E+E RLFRL+ KL +I ER + P WSETGDRYMLKLFRD++ HQ
Sbjct: 528 HSDLLESQLLLELECDRLFRLICKLQSIVERCDQGTSPEWSETGDRYMLKLFRDFVFHQS 587
Query: 417 QEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
G P+LD++HI+ LNK++A + E++CL+SRD Q+V++V+YA++KQ LD SF L
Sbjct: 588 DPLGAPYLDLAHIITTLNKVEAASPERLCLVSRDSQNVIIVTYADIKQWLDTSFSYL 644
>gi|256082858|ref|XP_002577669.1| hypothetical protein [Schistosoma mansoni]
gi|353231932|emb|CCD79287.1| hypothetical protein Smp_064020.2 [Schistosoma mansoni]
Length = 710
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDL 177
DD LGKL++ + C ++ AVQ +S +L+ R+Y +L LI L+S Q L
Sbjct: 485 DDFIQLGKLMIGVACGTVAAVQASQRASSFNLLQRAYRPELVTLIRSLVS-GQISGADQL 543
Query: 178 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSET 237
M + L + H D LE++L E+E RLFRL+ KL +I ER + P WSET
Sbjct: 544 MRATAPFAFDHLTRLYDHSDLLESQLLLELECDRLFRLICKLQSIVERCDQGTSPEWSET 603
Query: 238 GDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 297
GDRYMLKLFRD++ HQ G P+LD++HI+ LNK++A + E++CL+SRD Q+V++V+Y
Sbjct: 604 GDRYMLKLFRDFVFHQSDPLGAPYLDLAHIITTLNKVEAASPERLCLVSRDSQNVIIVTY 663
Query: 298 AELKQCLDQSFHEL 311
A++KQ LD SF L
Sbjct: 664 ADIKQWLDTSFSYL 677
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 87/117 (74%)
Query: 357 HGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQV 416
H D LE++L E+E RLFRL+ KL +I ER + P WSETGDRYMLKLFRD++ HQ
Sbjct: 561 HSDLLESQLLLELECDRLFRLICKLQSIVERCDQGTSPEWSETGDRYMLKLFRDFVFHQS 620
Query: 417 QEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
G P+LD++HI+ LNK++A + E++CL+SRD Q+V++V+YA++KQ LD SF L
Sbjct: 621 DPLGAPYLDLAHIITTLNKVEAASPERLCLVSRDSQNVIIVTYADIKQWLDTSFSYL 677
>gi|169599326|ref|XP_001793086.1| hypothetical protein SNOG_02480 [Phaeosphaeria nodorum SN15]
gi|160704581|gb|EAT90692.2| hypothetical protein SNOG_02480 [Phaeosphaeria nodorum SN15]
Length = 467
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 131/221 (59%), Gaps = 30/221 (13%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH-------- 169
DD LG++IL + + A +Q S+D + R+Y+A L+ I +LL+
Sbjct: 241 DDFVQLGRMILCIANNNTTA--HLQMQKSMDHVTRNYTARLKECIQWLLNPQPPLGTPSS 298
Query: 170 ------QKRTVVDLMPMIGARYYTQLDAVQLHG-DSLENELSKEMENGRLFRLLVKLGTI 222
+ + + + I + + D+ +LH D+L N L +E+E+ R+ RLLVKL +
Sbjct: 299 PTTPAPGSKDIDNFLGGISDQLASVFDS-ELHAQDTLTNTLGRELESSRIVRLLVKLNMV 357
Query: 223 NERPEL------------NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHC 270
NERPEL N W+ETG+RY LKLFRDY+ HQV +G P D++H++ C
Sbjct: 358 NERPELDASQQMSGGNTSNPSSVWAETGERYYLKLFRDYVFHQVDANGHPVTDLAHVLDC 417
Query: 271 LNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
LNKLDAGT EKI L+SRDEQ+VL+VS+ E+K+ L+ +F +L
Sbjct: 418 LNKLDAGTDEKIALISRDEQNVLIVSFREVKRGLEIAFQDL 458
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 93/132 (70%), Gaps = 13/132 (9%)
Query: 355 QLHG-DSLENELSKEMENGRLFRLLVKLGTINERPEL------------NLDPTWSETGD 401
+LH D+L N L +E+E+ R+ RLLVKL +NERPEL N W+ETG+
Sbjct: 327 ELHAQDTLTNTLGRELESSRIVRLLVKLNMVNERPELDASQQMSGGNTSNPSSVWAETGE 386
Query: 402 RYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAE 461
RY LKLFRDY+ HQV +G P D++H++ CLNKLDAGT EKI L+SRDEQ+VL+VS+ E
Sbjct: 387 RYYLKLFRDYVFHQVDANGHPVTDLAHVLDCLNKLDAGTDEKIALISRDEQNVLIVSFRE 446
Query: 462 LKQCLDQSFHEL 473
+K+ L+ +F +L
Sbjct: 447 VKRGLEIAFQDL 458
>gi|256082860|ref|XP_002577670.1| hypothetical protein [Schistosoma mansoni]
gi|353231931|emb|CCD79286.1| hypothetical protein Smp_064020.4 [Schistosoma mansoni]
Length = 771
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDL 177
DD LGKL++ + C ++ AVQ +S +L+ R+Y +L LI L+S Q L
Sbjct: 546 DDFIQLGKLMIGVACGTVAAVQASQRASSFNLLQRAYRPELVTLIRSLVS-GQISGADQL 604
Query: 178 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSET 237
M + L + H D LE++L E+E RLFRL+ KL +I ER + P WSET
Sbjct: 605 MRATAPFAFDHLTRLYDHSDLLESQLLLELECDRLFRLICKLQSIVERCDQGTSPEWSET 664
Query: 238 GDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 297
GDRYMLKLFRD++ HQ G P+LD++HI+ LNK++A + E++CL+SRD Q+V++V+Y
Sbjct: 665 GDRYMLKLFRDFVFHQSDPLGAPYLDLAHIITTLNKVEAASPERLCLVSRDSQNVIIVTY 724
Query: 298 AELKQCLDQSFHEL 311
A++KQ LD SF L
Sbjct: 725 ADIKQWLDTSFSYL 738
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 87/117 (74%)
Query: 357 HGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQV 416
H D LE++L E+E RLFRL+ KL +I ER + P WSETGDRYMLKLFRD++ HQ
Sbjct: 622 HSDLLESQLLLELECDRLFRLICKLQSIVERCDQGTSPEWSETGDRYMLKLFRDFVFHQS 681
Query: 417 QEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
G P+LD++HI+ LNK++A + E++CL+SRD Q+V++V+YA++KQ LD SF L
Sbjct: 682 DPLGAPYLDLAHIITTLNKVEAASPERLCLVSRDSQNVIIVTYADIKQWLDTSFSYL 738
>gi|367041892|ref|XP_003651326.1| hypothetical protein THITE_2111447 [Thielavia terrestris NRRL 8126]
gi|346998588|gb|AEO64990.1| hypothetical protein THITE_2111447 [Thielavia terrestris NRRL 8126]
Length = 648
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 126/198 (63%), Gaps = 4/198 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV---HQKRT 173
Q+DL G+L+L++ + A N+Q ++D + YSA+LR+ + +L++ + ++
Sbjct: 439 QEDLVKFGRLVLSLATGAPPA-HLNNIQAALDSLGAKYSANLRDAVAWLIAPPNPGESKS 497
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ +L+ + T D D + L+KE+ENGR+ R ++KL T+ ER +L
Sbjct: 498 IDNLISGVATHMTTFFDLSLQDNDEKQFHLAKELENGRVARSVMKLMTVVERGDLGGTQA 557
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETGDRY LKLFRDY+ H+V+ DG+P L + H++ C++KL+AG E + L SRD ++V
Sbjct: 558 WSETGDRYQLKLFRDYVFHRVEADGKPNLSIGHMLTCMSKLEAGVDEMVALTSRDNETVF 617
Query: 294 VVSYAELKQCLDQSFHEL 311
V++Y ELK+ D+SF+EL
Sbjct: 618 VLTYRELKKMFDRSFNEL 635
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 94/142 (66%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+ +++ +L+ + T D D + L+KE+ENGR+ R ++KL T+ ER +L
Sbjct: 494 ESKSIDNLISGVATHMTTFFDLSLQDNDEKQFHLAKELENGRVARSVMKLMTVVERGDLG 553
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
WSETGDRY LKLFRDY+ H+V+ DG+P L + H++ C++KL+AG E + L SRD
Sbjct: 554 GTQAWSETGDRYQLKLFRDYVFHRVEADGKPNLSIGHMLTCMSKLEAGVDEMVALTSRDN 613
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
++V V++Y ELK+ D+SF+EL
Sbjct: 614 ETVFVLTYRELKKMFDRSFNEL 635
>gi|255071087|ref|XP_002507625.1| predicted protein [Micromonas sp. RCC299]
gi|226522900|gb|ACO68883.1| predicted protein [Micromonas sp. RCC299]
Length = 651
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 126/200 (63%), Gaps = 15/200 (7%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTS--IDLMARSYSADLRNLILYLLS--VHQKR 172
+DDL A+G + + C S+ NL ++ + + +R S L +I+ L+S +
Sbjct: 452 RDDLRAVGISMANILCGSV------NLSSADALAIASRRCSPMLNRVIMGLVSGGIADSS 505
Query: 173 TVVD-LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 231
T L+P+I + L + D L++EL+KE+ENGRL RLL+KL INERP+ ++D
Sbjct: 506 TFSQMLVPII----FDSLKFERALCDQLKSELAKELENGRLLRLLIKLTFINERPDGDMD 561
Query: 232 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 291
P W+ETGDRY+LKLFRD++ HQ DG D H+ CLNKLD G EK+ L+SRDE S
Sbjct: 562 PNWAETGDRYILKLFRDFVFHQHDNDGNSITDWGHVFECLNKLDTGVAEKVLLVSRDEMS 621
Query: 292 VLVVSYAELKQCLDQSFHEL 311
+LV SYA++K+C + ++ EL
Sbjct: 622 MLVASYADIKRCTEVAYAEL 641
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 88/115 (76%)
Query: 359 DSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQE 418
D L++EL+KE+ENGRL RLL+KL INERP+ ++DP W+ETGDRY+LKLFRD++ HQ
Sbjct: 527 DQLKSELAKELENGRLLRLLIKLTFINERPDGDMDPNWAETGDRYILKLFRDFVFHQHDN 586
Query: 419 DGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
DG D H+ CLNKLD G EK+ L+SRDE S+LV SYA++K+C + ++ EL
Sbjct: 587 DGNSITDWGHVFECLNKLDTGVAEKVLLVSRDEMSMLVASYADIKRCTEVAYAEL 641
>gi|164661085|ref|XP_001731665.1| hypothetical protein MGL_0933 [Malassezia globosa CBS 7966]
gi|159105566|gb|EDP44451.1| hypothetical protein MGL_0933 [Malassezia globosa CBS 7966]
Length = 589
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 128/199 (64%), Gaps = 5/199 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKR-TVV 175
+DDLTALG+L+L C ++ A L S D R+YSA+L + + L VH + ++
Sbjct: 395 RDDLTALGRLLLCTGCNNVAAAA--TLSESFDAFQRTYSAELVHFVHKL--VHGEHLSIT 450
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D + + ++ + H D LE L +E+ENGRL RLL KL T+++RPE + +
Sbjct: 451 DTLHELTPYLADEVGSALYHTDLLEAALMRELENGRLVRLLCKLNTVDQRPEYEREGPSN 510
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETG+RY+L+LFRD + H V E G P LD+SH++ LNKLDAG E++ LMSRDE + ++V
Sbjct: 511 ETGERYVLRLFRDMVFHAVDERGHPTLDLSHVLVHLNKLDAGVDERLLLMSRDELNCVIV 570
Query: 296 SYAELKQCLDQSFHELSSS 314
SYA++K+ ++ +F +L+ S
Sbjct: 571 SYADIKRYVETAFLDLTRS 589
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 88/120 (73%)
Query: 357 HGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQV 416
H D LE L +E+ENGRL RLL KL T+++RPE + +ETG+RY+L+LFRD + H V
Sbjct: 470 HTDLLEAALMRELENGRLVRLLCKLNTVDQRPEYEREGPSNETGERYVLRLFRDMVFHAV 529
Query: 417 QEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSS 476
E G P LD+SH++ LNKLDAG E++ LMSRDE + ++VSYA++K+ ++ +F +L+ S
Sbjct: 530 DERGHPTLDLSHVLVHLNKLDAGVDERLLLMSRDELNCVIVSYADIKRYVETAFLDLTRS 589
>gi|256082864|ref|XP_002577672.1| hypothetical protein [Schistosoma mansoni]
gi|353231929|emb|CCD79284.1| hypothetical protein Smp_064020.6 [Schistosoma mansoni]
Length = 505
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDL 177
DD LGKL++ + C ++ AVQ +S +L+ R+Y +L LI L+S Q L
Sbjct: 280 DDFIQLGKLMIGVACGTVAAVQASQRASSFNLLQRAYRPELVTLIRSLVS-GQISGADQL 338
Query: 178 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSET 237
M + L + H D LE++L E+E RLFRL+ KL +I ER + P WSET
Sbjct: 339 MRATAPFAFDHLTRLYDHSDLLESQLLLELECDRLFRLICKLQSIVERCDQGTSPEWSET 398
Query: 238 GDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 297
GDRYMLKLFRD++ HQ G P+LD++HI+ LNK++A + E++CL+SRD Q+V++V+Y
Sbjct: 399 GDRYMLKLFRDFVFHQSDPLGAPYLDLAHIITTLNKVEAASPERLCLVSRDSQNVIIVTY 458
Query: 298 AELKQCLDQSFHEL 311
A++KQ LD SF L
Sbjct: 459 ADIKQWLDTSFSYL 472
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 87/117 (74%)
Query: 357 HGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQV 416
H D LE++L E+E RLFRL+ KL +I ER + P WSETGDRYMLKLFRD++ HQ
Sbjct: 356 HSDLLESQLLLELECDRLFRLICKLQSIVERCDQGTSPEWSETGDRYMLKLFRDFVFHQS 415
Query: 417 QEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
G P+LD++HI+ LNK++A + E++CL+SRD Q+V++V+YA++KQ LD SF L
Sbjct: 416 DPLGAPYLDLAHIITTLNKVEAASPERLCLVSRDSQNVIIVTYADIKQWLDTSFSYL 472
>gi|26324814|dbj|BAC26161.1| unnamed protein product [Mus musculus]
Length = 107
Score = 155 bits (393), Expect = 4e-35, Method: Composition-based stats.
Identities = 68/99 (68%), Positives = 84/99 (84%)
Query: 218 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 277
KLGTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 2 KLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAG 61
Query: 278 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 62 VPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 100
Score = 155 bits (393), Expect = 4e-35, Method: Composition-based stats.
Identities = 68/99 (68%), Positives = 84/99 (84%)
Query: 380 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
KLGTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 2 KLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAG 61
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 62 VPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 100
>gi|449296197|gb|EMC92217.1| hypothetical protein BAUCODRAFT_151644 [Baudoinia compniacensis
UAMH 10762]
Length = 637
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 127/238 (53%), Gaps = 42/238 (17%)
Query: 119 DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS----------- 167
DL LG+LIL + R+ A Q ++ S+ ++R+YS R + +LL+
Sbjct: 398 DLEDLGRLILGVAARNPTAHQ--SVDKSLQFISRTYSERFRLCLAWLLTPPSQSASHSPL 455
Query: 168 ------------VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRL 215
+ + L+ I + LD+ + D L N L +E+ENGRL RL
Sbjct: 456 SPTTTPPSDQAPSASEHNINSLLTNIADKVVATLDSTLHYEDELTNNLMRELENGRLVRL 515
Query: 216 LVKLGTINERPELNLDP-----------------TWSETGDRYMLKLFRDYLLHQVQEDG 258
L KL I ERPE WSETG+RY LKLFRDY+ HQ+ +G
Sbjct: 516 LTKLNVILERPETTTTGPTTGPTNTSTTSSNNSNAWSETGERYYLKLFRDYVFHQIDHEG 575
Query: 259 RPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RP LD+ HIV CLNKLD G +E++ L+SRDEQ+V VVSY E+K+ + ++ E+S +A+
Sbjct: 576 RPVLDLGHIVTCLNKLDVGVEERVQLVSRDEQNVFVVSYREVKRGFEAAWGEISKAAA 633
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 115/204 (56%), Gaps = 21/204 (10%)
Query: 296 SYAE-LKQCLDQSFHELSSSAS---LTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQL 351
+Y+E + CL S SAS L+P +T P + + L+ I + L
Sbjct: 430 TYSERFRLCLAWLLTPPSQSASHSPLSPTTTPPSDQAPSASEHNINSLLTNIADKVVATL 489
Query: 352 DAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP----------------- 394
D+ + D L N L +E+ENGRL RLL KL I ERPE
Sbjct: 490 DSTLHYEDELTNNLMRELENGRLVRLLTKLNVILERPETTTTGPTTGPTNTSTTSSNNSN 549
Query: 395 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 454
WSETG+RY LKLFRDY+ HQ+ +GRP LD+ HIV CLNKLD G +E++ L+SRDEQ+V
Sbjct: 550 AWSETGERYYLKLFRDYVFHQIDHEGRPVLDLGHIVTCLNKLDVGVEERVQLVSRDEQNV 609
Query: 455 LVVSYAELKQCLDQSFHELSSSAS 478
VVSY E+K+ + ++ E+S +A+
Sbjct: 610 FVVSYREVKRGFEAAWGEISKAAA 633
>gi|303273702|ref|XP_003056204.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462288|gb|EEH59580.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 597
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 113/195 (57%), Gaps = 5/195 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
+DDL A+G+L+ + C + + + +++ + +L +S +
Sbjct: 404 RDDLIAVGQLLAVLACGPSQVTSSDVIALAQKFCSKALGQVISDLAFGHISDSKM----- 458
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
L ++ + L A ++ D E KE+ENGRL R+L KL +NERP LD W+E
Sbjct: 459 LSQLLAPAAFDALHAERIINDQFRVEFVKEVENGRLLRILTKLAFVNERPSGRLDTNWAE 518
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 296
TGDRY+LKLFRDYL HQ EDG P LD H+ LNK+D G EK+ L+SRDE S+LVVS
Sbjct: 519 TGDRYILKLFRDYLFHQDNEDGSPILDWGHVFDSLNKVDIGVPEKVILLSRDELSMLVVS 578
Query: 297 YAELKQCLDQSFHEL 311
YA++K C+ ++ +L
Sbjct: 579 YADIKACIAGAYADL 593
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 89/135 (65%)
Query: 339 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 398
L ++ + L A ++ D E KE+ENGRL R+L KL +NERP LD W+E
Sbjct: 459 LSQLLAPAAFDALHAERIINDQFRVEFVKEVENGRLLRILTKLAFVNERPSGRLDTNWAE 518
Query: 399 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 458
TGDRY+LKLFRDYL HQ EDG P LD H+ LNK+D G EK+ L+SRDE S+LVVS
Sbjct: 519 TGDRYILKLFRDYLFHQDNEDGSPILDWGHVFDSLNKVDIGVPEKVILLSRDELSMLVVS 578
Query: 459 YAELKQCLDQSFHEL 473
YA++K C+ ++ +L
Sbjct: 579 YADIKACIAGAYADL 593
>gi|320581741|gb|EFW95960.1| Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex
[Ogataea parapolymorpha DL-1]
Length = 625
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 124/195 (63%), Gaps = 3/195 (1%)
Query: 119 DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLM 178
D+ +G LI + +SL+ + +NL + + S L++++ L+ + ++ L
Sbjct: 434 DIQGMGILIYDLA-KSLVFAKVQNLSAEEGIPKLTVSDKLKDVLKKLIG--NEVSLGQLQ 490
Query: 179 PMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETG 238
+I + ++ VQ D +E LS+E+EN RL RL KL I +RPE D +WSETG
Sbjct: 491 QLIAPEILSVVNGVQDSADYMEACLSREIENARLVRLFAKLDFICDRPEFVKDGSWSETG 550
Query: 239 DRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYA 298
+RY +KLFRDY+ HQV E+G+P LD++H ++CLNKLDAG++E I L+S DE S L+VSY
Sbjct: 551 ERYPIKLFRDYVFHQVDENGKPVLDLTHAINCLNKLDAGSKETILLVSPDEMSCLIVSYE 610
Query: 299 ELKQCLDQSFHELSS 313
LK+ +++SF +L S
Sbjct: 611 TLKELVEKSFRQLRS 625
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 121/197 (61%), Gaps = 6/197 (3%)
Query: 284 LMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQK-----RTVVD 338
L +RD Q + ++ Y K + LS+ + PK T+ L V +K ++
Sbjct: 430 LQARDIQGMGILIYDLAKSLVFAKVQNLSAEEGI-PKLTVSDKLKDVLKKLIGNEVSLGQ 488
Query: 339 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 398
L +I + ++ VQ D +E LS+E+EN RL RL KL I +RPE D +WSE
Sbjct: 489 LQQLIAPEILSVVNGVQDSADYMEACLSREIENARLVRLFAKLDFICDRPEFVKDGSWSE 548
Query: 399 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 458
TG+RY +KLFRDY+ HQV E+G+P LD++H ++CLNKLDAG++E I L+S DE S L+VS
Sbjct: 549 TGERYPIKLFRDYVFHQVDENGKPVLDLTHAINCLNKLDAGSKETILLVSPDEMSCLIVS 608
Query: 459 YAELKQCLDQSFHELSS 475
Y LK+ +++SF +L S
Sbjct: 609 YETLKELVEKSFRQLRS 625
>gi|453086982|gb|EMF15023.1| hypothetical protein SEPMUDRAFT_123412 [Mycosphaerella populorum
SO2202]
Length = 685
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 130/222 (58%), Gaps = 31/222 (13%)
Query: 119 DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL------------ 166
DL LG+LIL++ R+ +A ++ +++L++RSY+ R+ I +LL
Sbjct: 457 DLRDLGRLILSIAARNQLA--HKDAAKALELISRSYTERFRSCIAWLLAPPPLQQDGDGS 514
Query: 167 ---SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 223
S + + L+ I + D + D + +LS+E+ENGR+ RLL KL I
Sbjct: 515 VASSTTGEYSANALLTSIADKVIDIYDKGLHYEDEMTAQLSRELENGRVLRLLTKLAVIL 574
Query: 224 ERPELNL--------------DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVH 269
ERP++++ WSETG+RY LKLFRDY+ HQ+ +GRP +D+ HI+
Sbjct: 575 ERPDISITGNTRGNPALLNQPSAAWSETGERYYLKLFRDYVFHQIDAEGRPVIDLGHILT 634
Query: 270 CLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
CLNK+DAG EKI L+SRDE+S+ VVSY E+K+ ++ ++ E+
Sbjct: 635 CLNKVDAGIDEKIQLISRDEESLFVVSYKEVKRGIESAWMEI 676
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 89/129 (68%), Gaps = 14/129 (10%)
Query: 359 DSLENELSKEMENGRLFRLLVKLGTINERPELNL--------------DPTWSETGDRYM 404
D + +LS+E+ENGR+ RLL KL I ERP++++ WSETG+RY
Sbjct: 548 DEMTAQLSRELENGRVLRLLTKLAVILERPDISITGNTRGNPALLNQPSAAWSETGERYY 607
Query: 405 LKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQ 464
LKLFRDY+ HQ+ +GRP +D+ HI+ CLNK+DAG EKI L+SRDE+S+ VVSY E+K+
Sbjct: 608 LKLFRDYVFHQIDAEGRPVIDLGHILTCLNKVDAGIDEKIQLISRDEESLFVVSYKEVKR 667
Query: 465 CLDQSFHEL 473
++ ++ E+
Sbjct: 668 GIESAWMEI 676
>gi|170041592|ref|XP_001848541.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167865147|gb|EDS28530.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 93
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 78/89 (87%)
Query: 228 LNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSR 287
LNLD TWSETGDRYMLKLFRDYL H V EDGRPWL+ SHIV CLNKLDAGT EK+ LMSR
Sbjct: 3 LNLDVTWSETGDRYMLKLFRDYLFHTVTEDGRPWLNQSHIVQCLNKLDAGTLEKVQLMSR 62
Query: 288 DEQSVLVVSYAELKQCLDQSFHELSSSAS 316
DEQSVLVV+YAELK CL+Q+F EL ++A+
Sbjct: 63 DEQSVLVVTYAELKHCLEQAFSELVAAAT 91
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 78/89 (87%)
Query: 390 LNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSR 449
LNLD TWSETGDRYMLKLFRDYL H V EDGRPWL+ SHIV CLNKLDAGT EK+ LMSR
Sbjct: 3 LNLDVTWSETGDRYMLKLFRDYLFHTVTEDGRPWLNQSHIVQCLNKLDAGTLEKVQLMSR 62
Query: 450 DEQSVLVVSYAELKQCLDQSFHELSSSAS 478
DEQSVLVV+YAELK CL+Q+F EL ++A+
Sbjct: 63 DEQSVLVVTYAELKHCLEQAFSELVAAAT 91
>gi|219130066|ref|XP_002185195.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403374|gb|EEC43327.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 520
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 114 HDLQDDLTALGKLILAMTCRSLM--AVQRENLQTSIDLMARSYSADLRNLILYLL-SVHQ 170
HD++D LG+LIL++ + + + E + + +A++YS DL NL + L+ S Q
Sbjct: 311 HDVRD----LGRLILSLASGTEITHSTDMETVGSCEQFLAQNYSPDLHNLAMTLIRSTPQ 366
Query: 171 KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
+++D+ ++ R + + DA D +E LS E ++ R+ R+L+KL +NERPE
Sbjct: 367 PPSILDVSRVVAQRAFDEQDAAYQSFDRMERALSAEYDSSRMLRILLKLSYVNERPEFGP 426
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
+ W+++GD Y L LFRDY+ HQ G P +D+ H++ LNKLD +EKI L SRD +
Sbjct: 427 NRRWAQSGDCYALTLFRDYVFHQADGGGYPVMDLGHVISALNKLDGADEEKIVLSSRDGK 486
Query: 291 SVLVVSYAELKQCLDQSFHELSSSA 315
S++V SYAE+ +CL+ +F EL A
Sbjct: 487 SLMVASYAEIARCLENAFQELCVGA 511
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 94/151 (62%)
Query: 327 LLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINE 386
+ S Q +++D+ ++ R + + DA D +E LS E ++ R+ R+L+KL +NE
Sbjct: 361 IRSTPQPPSILDVSRVVAQRAFDEQDAAYQSFDRMERALSAEYDSSRMLRILLKLSYVNE 420
Query: 387 RPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICL 446
RPE + W+++GD Y L LFRDY+ HQ G P +D+ H++ LNKLD +EKI L
Sbjct: 421 RPEFGPNRRWAQSGDCYALTLFRDYVFHQADGGGYPVMDLGHVISALNKLDGADEEKIVL 480
Query: 447 MSRDEQSVLVVSYAELKQCLDQSFHELSSSA 477
SRD +S++V SYAE+ +CL+ +F EL A
Sbjct: 481 SSRDGKSLMVASYAEIARCLENAFQELCVGA 511
>gi|406603733|emb|CCH44758.1| PAB-dependent poly(A)-specific ribonuclease subunit 3
[Wickerhamomyces ciferrii]
Length = 696
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 115/173 (66%), Gaps = 6/173 (3%)
Query: 141 ENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLE 200
E++ ++ID+ D ++ + YLL+ + +I + + L+ +Q GD E
Sbjct: 530 EDIISNIDI-----DEDFKSALKYLLN-ESNPNIESFQKIISKKLFESLNQIQEQGDYYE 583
Query: 201 NELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRP 260
++L++E+ENGRL RLL KL I ERPE +PTW+++G+RY +KLFR+Y+ +QV + G+P
Sbjct: 584 SQLTRELENGRLVRLLTKLNFILERPEYQSNPTWAQSGERYPIKLFREYVFNQVDDRGKP 643
Query: 261 WLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSS 313
LD++ ++ LNKLDAG EK L+S DEQ+ ++VSY E++ +++SF ELS+
Sbjct: 644 VLDLAFVLKTLNKLDAGIDEKFLLVSHDEQTCMIVSYKEMRDLIERSFRELSN 696
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 326 YLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 385
YLL+ + +I + + L+ +Q GD E++L++E+ENGRL RLL KL I
Sbjct: 548 YLLN-ESNPNIESFQKIISKKLFESLNQIQEQGDYYESQLTRELENGRLVRLLTKLNFIL 606
Query: 386 ERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKIC 445
ERPE +PTW+++G+RY +KLFR+Y+ +QV + G+P LD++ ++ LNKLDAG EK
Sbjct: 607 ERPEYQSNPTWAQSGERYPIKLFREYVFNQVDDRGKPVLDLAFVLKTLNKLDAGIDEKFL 666
Query: 446 LMSRDEQSVLVVSYAELKQCLDQSFHELSS 475
L+S DEQ+ ++VSY E++ +++SF ELS+
Sbjct: 667 LVSHDEQTCMIVSYKEMRDLIERSFRELSN 696
>gi|224007483|ref|XP_002292701.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971563|gb|EED89897.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 447
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 125/213 (58%), Gaps = 18/213 (8%)
Query: 118 DDLTALGKLILAMTCRSLMAVQ---RENLQTS--------IDLMARSYSADLRNLILYLL 166
+D+ ALG L+L+MT + + V R N Q + + ++YS DL +LI LL
Sbjct: 231 EDMRALGCLLLSMTTGTEVTVNDVYRNNSQQQQLMILGQYLGFVRQNYSRDLHSLIESLL 290
Query: 167 SVHQK----RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 222
+ R V M + R + ++D D + LS E+GR RL++KL +
Sbjct: 291 NPSMPPPGIRAVATNMAV---RAFEEMDGAHSCIDEMHGSLSGIYESGRALRLMLKLAFV 347
Query: 223 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 282
NERPE +D WSE+GD Y+LKLFRD++ HQ G P +D+ H+V LNKLDA +EKI
Sbjct: 348 NERPEFGIDKNWSESGDCYILKLFRDFVFHQADGAGYPAMDLGHVVSSLNKLDAADEEKI 407
Query: 283 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSA 315
L SRD ++VLVVS+A++ CL++++ EL S+A
Sbjct: 408 VLTSRDGKNVLVVSFADVAWCLEKAYQELCSNA 440
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 90/135 (66%)
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDR 402
+ R + ++D D + LS E+GR RL++KL +NERPE +D WSE+GD
Sbjct: 306 MAVRAFEEMDGAHSCIDEMHGSLSGIYESGRALRLMLKLAFVNERPEFGIDKNWSESGDC 365
Query: 403 YMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAEL 462
Y+LKLFRD++ HQ G P +D+ H+V LNKLDA +EKI L SRD ++VLVVS+A++
Sbjct: 366 YILKLFRDFVFHQADGAGYPAMDLGHVVSSLNKLDAADEEKIVLTSRDGKNVLVVSFADV 425
Query: 463 KQCLDQSFHELSSSA 477
CL++++ EL S+A
Sbjct: 426 AWCLEKAYQELCSNA 440
>gi|385303498|gb|EIF47567.1| essential subunit of the pan2p-pan3p poly -ribonuclease complex
[Dekkera bruxellensis AWRI1499]
Length = 467
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 135/245 (55%), Gaps = 12/245 (4%)
Query: 70 ATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLTALGKLILA 129
A+ H+ F N++A+ + L + E E + DL LG+LIL
Sbjct: 229 ASKAHNQFQNGNNLKADGTKMDTSELTQSKEEKAAHXSAE------QKRDLVRLGELILN 282
Query: 130 MTCRSLMAVQRENLQ--TSIDLMAR-SYSADLRNLILYLLSVHQKRTVVDLMPMIGARYY 186
+ +S + ++ Q T +++ R +S + ++ Y+LS + + +L I
Sbjct: 283 L-AKSTVFIKETEAQSMTREEVIGRLQFSXRFKAVLKYILS--EGSSWEELQASISPEIL 339
Query: 187 TQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLF 246
D Q D +E L++E+EN RL RL KL I+ERPE D +WSETG RY +KLF
Sbjct: 340 KIADGFQKSCDYMEANLTREVENARLVRLFAKLBVISERPEFLKDGSWSETGKRYPVKLF 399
Query: 247 RDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQ 306
+D++ HQV E G P +D++HI++CLNKLDAG E + L+S DE + LV SY +LK+ +D
Sbjct: 400 KDFVFHQVDEXGHPVVDLTHIINCLNKLDAGVDENLLLVSPDEMTCLVTSYKQLKELVDN 459
Query: 307 SFHEL 311
SF E+
Sbjct: 460 SFREV 464
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 85/122 (69%)
Query: 352 DAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDY 411
D Q D +E L++E+EN RL RL KL I+ERPE D +WSETG RY +KLF+D+
Sbjct: 343 DGFQKSCDYMEANLTREVENARLVRLFAKLBVISERPEFLKDGSWSETGKRYPVKLFKDF 402
Query: 412 LLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFH 471
+ HQV E G P +D++HI++CLNKLDAG E + L+S DE + LV SY +LK+ +D SF
Sbjct: 403 VFHQVDEXGHPVVDLTHIINCLNKLDAGVDENLLLVSPDEMTCLVTSYKQLKELVDNSFR 462
Query: 472 EL 473
E+
Sbjct: 463 EV 464
>gi|307110911|gb|EFN59146.1| hypothetical protein CHLNCDRAFT_33873 [Chlorella variabilis]
Length = 161
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 90/129 (69%)
Query: 188 QLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFR 247
+LD+ + D L E+ +E +NGRL RLL+KL I +RPEL D W+ETGDRY+LKLFR
Sbjct: 3 ELDSAAAYSDGLLGEVQREADNGRLLRLLMKLCYICDRPELGGDTQWAETGDRYLLKLFR 62
Query: 248 DYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQS 307
D L HQV E+G P LD LNK+DAG EK+ LMSRDE S+LVVSYA++++C+
Sbjct: 63 DLLFHQVDEEGAPLLDWGLAAEALNKVDAGVPEKVLLMSRDEMSMLVVSYADVRRCIATC 122
Query: 308 FHELSSSAS 316
+ EL S AS
Sbjct: 123 YDELRSRAS 131
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 90/129 (69%)
Query: 350 QLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFR 409
+LD+ + D L E+ +E +NGRL RLL+KL I +RPEL D W+ETGDRY+LKLFR
Sbjct: 3 ELDSAAAYSDGLLGEVQREADNGRLLRLLMKLCYICDRPELGGDTQWAETGDRYLLKLFR 62
Query: 410 DYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQS 469
D L HQV E+G P LD LNK+DAG EK+ LMSRDE S+LVVSYA++++C+
Sbjct: 63 DLLFHQVDEEGAPLLDWGLAAEALNKVDAGVPEKVLLMSRDEMSMLVVSYADVRRCIATC 122
Query: 470 FHELSSSAS 478
+ EL S AS
Sbjct: 123 YDELRSRAS 131
>gi|397563737|gb|EJK43924.1| hypothetical protein THAOC_37583 [Thalassiosira oceanica]
Length = 640
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 97/144 (67%), Gaps = 2/144 (1%)
Query: 181 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDR 240
+ +R + +LD+ D++ L+ E+GR RL++KL +NERPE +D WSE+GD
Sbjct: 499 MASRVFEELDSAHESVDAMNMTLTGIFESGRALRLVLKLAFVNERPEFGIDKNWSESGDC 558
Query: 241 YMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAEL 300
Y+LKLFRDY+ HQ E+G P +D+ H++ LNKLDA +EKI L SRD ++VLVVS+A++
Sbjct: 559 YILKLFRDYVFHQCDENGNPVMDVGHVIASLNKLDAADEEKIVLTSRDGENVLVVSFADV 618
Query: 301 KQCLDQSFHELSSSASLTPKSTLP 324
CL++S+ EL S + P T P
Sbjct: 619 AWCLEKSYQELISRS--VPVPTFP 640
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 97/144 (67%), Gaps = 2/144 (1%)
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDR 402
+ +R + +LD+ D++ L+ E+GR RL++KL +NERPE +D WSE+GD
Sbjct: 499 MASRVFEELDSAHESVDAMNMTLTGIFESGRALRLVLKLAFVNERPEFGIDKNWSESGDC 558
Query: 403 YMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAEL 462
Y+LKLFRDY+ HQ E+G P +D+ H++ LNKLDA +EKI L SRD ++VLVVS+A++
Sbjct: 559 YILKLFRDYVFHQCDENGNPVMDVGHVIASLNKLDAADEEKIVLTSRDGENVLVVSFADV 618
Query: 463 KQCLDQSFHELSSSASLTPKSTLP 486
CL++S+ EL S + P T P
Sbjct: 619 AWCLEKSYQELISRS--VPVPTFP 640
>gi|363753954|ref|XP_003647193.1| hypothetical protein Ecym_5640 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890829|gb|AET40376.1| hypothetical protein Ecym_5640 [Eremothecium cymbalariae
DBVPG#7215]
Length = 625
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
Q D ALG ++L++T + L ++ ID + +N++ YLL Q +++ +
Sbjct: 437 QRDYKALGTVLLSLTHKMLGTKDQQLELMEIDPV-------FKNVLSYLL-CDQHKSIQE 488
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
+ + + + + Q + + +E +LS+E+ENGRLFR++ KL I R E ++D WSE
Sbjct: 489 FTALFSYKMLSVIGSFQNYSEFIEQQLSRELENGRLFRIMCKLNFIFGRMESSVDINWSE 548
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 296
+GD++ + LF DY+ HQV E+G+ +D++H++ CLNKLD G EKI L++ DE + +V+S
Sbjct: 549 SGDKFPIILFYDYVFHQVDENGKSIMDLTHVLRCLNKLDTGVSEKIILVTPDEMNCIVIS 608
Query: 297 YAELKQCLDQSFHELS 312
Y ELK +D +F ++
Sbjct: 609 YKELKDSIDSTFRSMT 624
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 99/149 (66%), Gaps = 1/149 (0%)
Query: 326 YLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 385
YLL Q +++ + + + + + + Q + + +E +LS+E+ENGRLFR++ KL I
Sbjct: 477 YLL-CDQHKSIQEFTALFSYKMLSVIGSFQNYSEFIEQQLSRELENGRLFRIMCKLNFIF 535
Query: 386 ERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKIC 445
R E ++D WSE+GD++ + LF DY+ HQV E+G+ +D++H++ CLNKLD G EKI
Sbjct: 536 GRMESSVDINWSESGDKFPIILFYDYVFHQVDENGKSIMDLTHVLRCLNKLDTGVSEKII 595
Query: 446 LMSRDEQSVLVVSYAELKQCLDQSFHELS 474
L++ DE + +V+SY ELK +D +F ++
Sbjct: 596 LVTPDEMNCIVISYKELKDSIDSTFRSMT 624
>gi|380093775|emb|CCC08739.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 653
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL---SVHQKRT 173
Q+D G++ILA+ + + N+ ++ MA YS L+ ++ +L+ + + +T
Sbjct: 444 QEDFVKFGRIILALATNT-PTLNFNNIDAALATMAPRYSTQLKGVLEWLIKPSAPGETKT 502
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V L+ + + V D E L +E+ENGR+ RL+ KL +NER + +
Sbjct: 503 VETLLGGMTTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGDSCGVHS 562
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETG+R +LKLFRDY+ HQV DG+ LD +H + CL+KLDA ++E+I L SRD +V
Sbjct: 563 WSETGERLLLKLFRDYVFHQVDADGKARLDTNHYLSCLSKLDASSEEQILLTSRDNATVF 622
Query: 294 VVSYAELKQCLDQSFHELSSSA 315
VVSY ++Q LD+++ EL +
Sbjct: 623 VVSYRSIRQMLDRAYGELGKES 644
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 91/146 (62%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+ +TV L+ + + V D E L +E+ENGR+ RL+ KL +NER +
Sbjct: 499 ETKTVETLLGGMTTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGDSC 558
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
+WSETG+R +LKLFRDY+ HQV DG+ LD +H + CL+KLDA ++E+I L SRD
Sbjct: 559 GVHSWSETGERLLLKLFRDYVFHQVDADGKARLDTNHYLSCLSKLDASSEEQILLTSRDN 618
Query: 452 QSVLVVSYAELKQCLDQSFHELSSSA 477
+V VVSY ++Q LD+++ EL +
Sbjct: 619 ATVFVVSYRSIRQMLDRAYGELGKES 644
>gi|45185858|ref|NP_983574.1| ACR172Wp [Ashbya gossypii ATCC 10895]
gi|74694845|sp|Q75BU9.1|PAN3_ASHGO RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|44981648|gb|AAS51398.1| ACR172Wp [Ashbya gossypii ATCC 10895]
Length = 612
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
Q D +A+G L++ + R M R+ S+D+ + ++ YLLS +K+T+ +
Sbjct: 424 QADYSAVGALLMDLAQR--MLGTRDQPLDSMDI-----DPLFKRVLAYLLS-DEKKTIAE 475
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
+ + + + Q + + +E LS+E+ENGRLFRL+ KL I R E ++D WSE
Sbjct: 476 FTALFSHKMLDIISSSQTYSEYIEQHLSRELENGRLFRLMCKLNFIFGRMESSMDIHWSE 535
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 296
GD++ + LF DY+ HQV E+G+ +D++H++ CLNKLD G EKI L++ DE + +++S
Sbjct: 536 AGDKFPIILFYDYVFHQVDENGKSVMDLTHVLRCLNKLDTGVSEKIILVTPDEMNCIIIS 595
Query: 297 YAELKQCLDQSFHELS 312
Y ELK +D +F ++
Sbjct: 596 YKELKDSIDSTFRSMT 611
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 326 YLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 385
YLLS +K+T+ + + + + + Q + + +E LS+E+ENGRLFRL+ KL I
Sbjct: 464 YLLS-DEKKTIAEFTALFSHKMLDIISSSQTYSEYIEQHLSRELENGRLFRLMCKLNFIF 522
Query: 386 ERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKIC 445
R E ++D WSE GD++ + LF DY+ HQV E+G+ +D++H++ CLNKLD G EKI
Sbjct: 523 GRMESSMDIHWSEAGDKFPIILFYDYVFHQVDENGKSVMDLTHVLRCLNKLDTGVSEKII 582
Query: 446 LMSRDEQSVLVVSYAELKQCLDQSFHELS 474
L++ DE + +++SY ELK +D +F ++
Sbjct: 583 LVTPDEMNCIIISYKELKDSIDSTFRSMT 611
>gi|336264610|ref|XP_003347081.1| hypothetical protein SMAC_05379 [Sordaria macrospora k-hell]
Length = 525
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL---SVHQKRT 173
Q+D G++ILA+ + + N+ ++ MA YS L+ ++ +L+ + + +T
Sbjct: 316 QEDFVKFGRIILALATNT-PTLNFNNIDAALATMAPRYSTQLKGVLEWLIKPSAPGETKT 374
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V L+ + + V D E L +E+ENGR+ RL+ KL +NER + +
Sbjct: 375 VETLLGGMTTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGDSCGVHS 434
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETG+R +LKLFRDY+ HQV DG+ LD +H + CL+KLDA ++E+I L SRD +V
Sbjct: 435 WSETGERLLLKLFRDYVFHQVDADGKARLDTNHYLSCLSKLDASSEEQILLTSRDNATVF 494
Query: 294 VVSYAELKQCLDQSFHELSSSA 315
VVSY ++Q LD+++ EL +
Sbjct: 495 VVSYRSIRQMLDRAYGELGKES 516
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 91/146 (62%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+ +TV L+ + + V D E L +E+ENGR+ RL+ KL +NER +
Sbjct: 371 ETKTVETLLGGMTTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGDSC 430
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
+WSETG+R +LKLFRDY+ HQV DG+ LD +H + CL+KLDA ++E+I L SRD
Sbjct: 431 GVHSWSETGERLLLKLFRDYVFHQVDADGKARLDTNHYLSCLSKLDASSEEQILLTSRDN 490
Query: 452 QSVLVVSYAELKQCLDQSFHELSSSA 477
+V VVSY ++Q LD+++ EL +
Sbjct: 491 ATVFVVSYRSIRQMLDRAYGELGKES 516
>gi|336463586|gb|EGO51826.1| PAB-dependent poly(A)-specific ribonuclease subunit pan-3
[Neurospora tetrasperma FGSC 2508]
Length = 656
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 118/202 (58%), Gaps = 4/202 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL---SVHQKRT 173
Q+D G++ILA+ + + N+ ++ + YS LR ++ +L+ + + +T
Sbjct: 447 QEDFVKFGRIILALATNT-PTLNFNNIDAALATIVPRYSTQLRGVLEWLIKPSAPGETKT 505
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V L+ I + V D E L +E+ENGR+ RL+ KL +NER +
Sbjct: 506 VETLLGGITTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGDSCGVHN 565
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETG+R +LKLFRDY+ HQV DG+ LD +H ++CL+KLDA ++E+I L SRD +V
Sbjct: 566 WSETGERLLLKLFRDYVFHQVDADGKARLDTNHYLNCLSKLDASSEEQILLTSRDNATVF 625
Query: 294 VVSYAELKQCLDQSFHELSSSA 315
VVSY ++Q LD+++ EL +
Sbjct: 626 VVSYRSIRQMLDRAYGELGKES 647
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 91/146 (62%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+ +TV L+ I + V D E L +E+ENGR+ RL+ KL +NER +
Sbjct: 502 ETKTVETLLGGITTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGDSC 561
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
WSETG+R +LKLFRDY+ HQV DG+ LD +H ++CL+KLDA ++E+I L SRD
Sbjct: 562 GVHNWSETGERLLLKLFRDYVFHQVDADGKARLDTNHYLNCLSKLDASSEEQILLTSRDN 621
Query: 452 QSVLVVSYAELKQCLDQSFHELSSSA 477
+V VVSY ++Q LD+++ EL +
Sbjct: 622 ATVFVVSYRSIRQMLDRAYGELGKES 647
>gi|158563946|sp|Q7SDP4.2|PAN3_NEUCR RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
pan-3; AltName: Full=PAB1P-dependent poly(A)-nuclease
Length = 656
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 118/202 (58%), Gaps = 4/202 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL---SVHQKRT 173
Q+D G++ILA+ + + N+ ++ + YS LR ++ +L+ + + +T
Sbjct: 447 QEDFVKFGRIILALATNT-PTLNFNNIDAALATIVPRYSTQLRGVLEWLIKPSAPGETKT 505
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V L+ I + V D E L +E+ENGR+ RL+ KL +NER +
Sbjct: 506 VETLLGGITTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGDSCGVHN 565
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETG+R +LKLFRDY+ HQV DG+ LD +H ++CL+KLDA ++E+I L SRD +V
Sbjct: 566 WSETGERLLLKLFRDYVFHQVDADGKARLDTNHYLNCLSKLDASSEEQILLTSRDNATVF 625
Query: 294 VVSYAELKQCLDQSFHELSSSA 315
VVSY ++Q LD+++ EL +
Sbjct: 626 VVSYRSIRQMLDRAYGELGKES 647
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 91/146 (62%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+ +TV L+ I + V D E L +E+ENGR+ RL+ KL +NER +
Sbjct: 502 ETKTVETLLGGITTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGDSC 561
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
WSETG+R +LKLFRDY+ HQV DG+ LD +H ++CL+KLDA ++E+I L SRD
Sbjct: 562 GVHNWSETGERLLLKLFRDYVFHQVDADGKARLDTNHYLNCLSKLDASSEEQILLTSRDN 621
Query: 452 QSVLVVSYAELKQCLDQSFHELSSSA 477
+V VVSY ++Q LD+++ EL +
Sbjct: 622 ATVFVVSYRSIRQMLDRAYGELGKES 647
>gi|164429559|ref|XP_964113.2| hypothetical protein NCU01929 [Neurospora crassa OR74A]
gi|157073528|gb|EAA34877.2| predicted protein [Neurospora crassa OR74A]
Length = 550
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 118/202 (58%), Gaps = 4/202 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL---SVHQKRT 173
Q+D G++ILA+ + + N+ ++ + YS LR ++ +L+ + + +T
Sbjct: 341 QEDFVKFGRIILALATNT-PTLNFNNIDAALATIVPRYSTQLRGVLEWLIKPSAPGETKT 399
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V L+ I + V D E L +E+ENGR+ RL+ KL +NER +
Sbjct: 400 VETLLGGITTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGDSCGVHN 459
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETG+R +LKLFRDY+ HQV DG+ LD +H ++CL+KLDA ++E+I L SRD +V
Sbjct: 460 WSETGERLLLKLFRDYVFHQVDADGKARLDTNHYLNCLSKLDASSEEQILLTSRDNATVF 519
Query: 294 VVSYAELKQCLDQSFHELSSSA 315
VVSY ++Q LD+++ EL +
Sbjct: 520 VVSYRSIRQMLDRAYGELGKES 541
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 91/146 (62%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+ +TV L+ I + V D E L +E+ENGR+ RL+ KL +NER +
Sbjct: 396 ETKTVETLLGGITTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGDSC 455
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
WSETG+R +LKLFRDY+ HQV DG+ LD +H ++CL+KLDA ++E+I L SRD
Sbjct: 456 GVHNWSETGERLLLKLFRDYVFHQVDADGKARLDTNHYLNCLSKLDASSEEQILLTSRDN 515
Query: 452 QSVLVVSYAELKQCLDQSFHELSSSA 477
+V VVSY ++Q LD+++ EL +
Sbjct: 516 ATVFVVSYRSIRQMLDRAYGELGKES 541
>gi|374106780|gb|AEY95689.1| FACR172Wp [Ashbya gossypii FDAG1]
Length = 612
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 119/196 (60%), Gaps = 8/196 (4%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
Q D +A+G L++ + R M R+ S+D+ + ++ YLLS +K+T+ +
Sbjct: 424 QADYSAVGALLMDLAQR--MLGTRDQPLDSMDI-----DPLFKRVLAYLLS-DEKKTIAE 475
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
+ + + + Q + + +E LS+E+ENGRLFRL+ KL I R E ++D WSE
Sbjct: 476 FTALFSHKMLDIISSSQTYSEYIEQHLSRELENGRLFRLMCKLNFIFGRMESSMDIHWSE 535
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 296
GD++ + LF DY+ HQV E+G+ +D++H++ CLNKLD G EKI L++ DE + +++S
Sbjct: 536 AGDKFPIILFYDYVFHQVDENGKSVMDLTHVLRCLNKLDTGVSEKIILVTPDEMNCIIIS 595
Query: 297 YAELKQCLDQSFHELS 312
Y ELK +D +F ++
Sbjct: 596 YKELKDSIDSTFRSMT 611
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 326 YLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 385
YLLS +K+T+ + + + + + Q + + +E LS+E+ENGRLFRL+ KL I
Sbjct: 464 YLLS-DEKKTIAEFTALFSHKMLDIISSSQTYSEYIEQHLSRELENGRLFRLMCKLNFIF 522
Query: 386 ERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKIC 445
R E ++D WSE GD++ + LF DY+ HQV E+G+ +D++H++ CLNKLD G EKI
Sbjct: 523 GRMESSMDIHWSEAGDKFPIILFYDYVFHQVDENGKSVMDLTHVLRCLNKLDTGVSEKII 582
Query: 446 LMSRDEQSVLVVSYAELKQCLDQSFHELS 474
L++ DE + +++SY ELK +D +F ++
Sbjct: 583 LVTPDEMNCIIISYKELKDSIDSTFRSMT 611
>gi|171676175|ref|XP_001903041.1| hypothetical protein [Podospora anserina S mat+]
gi|170936153|emb|CAP60813.1| unnamed protein product [Podospora anserina S mat+]
Length = 647
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 118/199 (59%), Gaps = 6/199 (3%)
Query: 118 DDLTALGKLILAM-TCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS----VHQKR 172
+DL GK+IL + T +Q N + ++D + + YS LR+ + +LLS Q
Sbjct: 441 EDLVKFGKVILCLATGMPPNLLQSSNTKAALDSLVK-YSRSLRDALQFLLSPVAPNGQPH 499
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
T+ + MI + Q + D + L++E+ENGR+ R ++KL I ER +L
Sbjct: 500 TIAHFLTMIAPQLVQQANNTLRENDEQQYWLAREIENGRIARNVMKLSVILERGDLGSQS 559
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
WSE GDR+ LKLFRDY+ H+V G+P L + H++ C++KLDAG E+I L SRD ++V
Sbjct: 560 NWSEVGDRFQLKLFRDYVFHRVDASGKPDLGLGHMLSCMSKLDAGVDEQIMLTSRDNETV 619
Query: 293 LVVSYAELKQCLDQSFHEL 311
V++Y EL+ +++F+EL
Sbjct: 620 FVITYRELRGMFERAFNEL 638
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 89/142 (62%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
Q T+ + MI + Q + D + L++E+ENGR+ R ++KL I ER +L
Sbjct: 497 QPHTIAHFLTMIAPQLVQQANNTLRENDEQQYWLAREIENGRIARNVMKLSVILERGDLG 556
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
WSE GDR+ LKLFRDY+ H+V G+P L + H++ C++KLDAG E+I L SRD
Sbjct: 557 SQSNWSEVGDRFQLKLFRDYVFHRVDASGKPDLGLGHMLSCMSKLDAGVDEQIMLTSRDN 616
Query: 452 QSVLVVSYAELKQCLDQSFHEL 473
++V V++Y EL+ +++F+EL
Sbjct: 617 ETVFVITYRELRGMFERAFNEL 638
>gi|254568688|ref|XP_002491454.1| Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex
[Komagataella pastoris GS115]
gi|238031251|emb|CAY69174.1| Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex
[Komagataella pastoris GS115]
gi|328352036|emb|CCA38435.1| PAB-dependent poly(A)-specific ribonuclease subunit pan3
[Komagataella pastoris CBS 7435]
Length = 614
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 118/196 (60%), Gaps = 3/196 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMAR-SYSADLRNLILYLLSVHQKRTVV 175
+ DL L KL+ ++ S+ + +T ++ +S D + + YL+S +
Sbjct: 415 KKDLELLAKLLYDLSITSIYGSVSFDDKTQDQIIDHLKFSDDYKATLKYLISA--DFNLK 472
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
++ I R +D +Q D +E++LS E+EN RL RL+ KL ++ RPE DP WS
Sbjct: 473 EIQTRIAPRLLDVIDGLQNSNDFIESQLSTELENARLVRLMSKLSFLHGRPEHEGDPNWS 532
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
E+ Y L LF DY+ HQV E G P +D++H++ CLNKLDAG +E+I L+S+DE++ +++
Sbjct: 533 ESSANYPLTLFVDYVYHQVDERGYPVVDLAHVITCLNKLDAGIEERILLVSKDEKNCIII 592
Query: 296 SYAELKQCLDQSFHEL 311
SY ELK +++ F+EL
Sbjct: 593 SYKELKTLIEEGFNEL 608
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 101/154 (65%), Gaps = 3/154 (1%)
Query: 320 KSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV 379
K+TL YL+S + ++ I R +D +Q D +E++LS E+EN RL RL+
Sbjct: 458 KATLK-YLISA--DFNLKEIQTRIAPRLLDVIDGLQNSNDFIESQLSTELENARLVRLMS 514
Query: 380 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
KL ++ RPE DP WSE+ Y L LF DY+ HQV E G P +D++H++ CLNKLDAG
Sbjct: 515 KLSFLHGRPEHEGDPNWSESSANYPLTLFVDYVYHQVDERGYPVVDLAHVITCLNKLDAG 574
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
+E+I L+S+DE++ +++SY ELK +++ F+EL
Sbjct: 575 IEERILLVSKDEKNCIIISYKELKTLIEEGFNEL 608
>gi|365984165|ref|XP_003668915.1| hypothetical protein NDAI_0C00120 [Naumovozyma dairenensis CBS 421]
gi|343767683|emb|CCD23672.1| hypothetical protein NDAI_0C00120 [Naumovozyma dairenensis CBS 421]
Length = 730
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q+D + LG + ++C+ N++ DL + + ++ YLL K + +
Sbjct: 536 QNDFSQLGIFLQKLSCKINGVDNTSNVEKIDDL---NVDDQFKTVLKYLLDKSNKNKNIK 592
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
+L + + + L++ Q + + E LSKE+EN RLFRL+ KL I R E +D WS
Sbjct: 593 ELSQLFIDKILSNLESFQGYAEFTEATLSKELENARLFRLICKLNFIFGRIESRIDINWS 652
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
E+G+++ + LF DY+ HQ+ +G+P +D++H++ CLNKLDAG QEKI L++ DE + +V+
Sbjct: 653 ESGEKFPIILFYDYVFHQLDSNGKPIMDLTHVLRCLNKLDAGIQEKIVLVTPDELNCIVI 712
Query: 296 SYAELKQCLDQSFHELS 312
+Y EL+ +D +F LS
Sbjct: 713 TYKELRDLIDSTFRSLS 729
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 100/155 (64%)
Query: 320 KSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV 379
K+ L L ++ + + +L + + + L++ Q + + E LSKE+EN RLFRL+
Sbjct: 575 KTVLKYLLDKSNKNKNIKELSQLFIDKILSNLESFQGYAEFTEATLSKELENARLFRLIC 634
Query: 380 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
KL I R E +D WSE+G+++ + LF DY+ HQ+ +G+P +D++H++ CLNKLDAG
Sbjct: 635 KLNFIFGRIESRIDINWSESGEKFPIILFYDYVFHQLDSNGKPIMDLTHVLRCLNKLDAG 694
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
QEKI L++ DE + +V++Y EL+ +D +F LS
Sbjct: 695 IQEKIVLVTPDELNCIVITYKELRDLIDSTFRSLS 729
>gi|410077843|ref|XP_003956503.1| hypothetical protein KAFR_0C03770 [Kazachstania africana CBS 2517]
gi|372463087|emb|CCF57368.1| hypothetical protein KAFR_0C03770 [Kazachstania africana CBS 2517]
Length = 637
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 124/210 (59%), Gaps = 9/210 (4%)
Query: 112 NYHD-LQDDLTALGKLILAM----TCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
N HD Q D LG + + S +EN+ T S L++++ YLL
Sbjct: 430 NIHDNQQTDFFNLGTFLFQLAKNINSESSFENSKENI-TEEKTEKLSVDDQLKSVLKYLL 488
Query: 167 S--VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINE 224
+ +H K +V+DL + + Y+ DA++ + + EN LS+E+EN RLFRL+ KL I
Sbjct: 489 NDKIHDK-SVMDLSKLFIDKIYSTFDALKTYSEFSENVLSRELENSRLFRLICKLNFIFG 547
Query: 225 RPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICL 284
R E +D WSE+G+++ + LF D++ HQV E+G+ +D++H++ CLNKLD G EK+ L
Sbjct: 548 RIESRIDINWSESGEKFPIILFYDFVFHQVDENGKSVMDLTHVLRCLNKLDVGVSEKLVL 607
Query: 285 MSRDEQSVLVVSYAELKQCLDQSFHELSSS 314
++ DE + +++SY ELK ++ +F L+ S
Sbjct: 608 VTPDEMNCIIISYKELKDLIESTFRSLTQS 637
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 103/153 (67%), Gaps = 3/153 (1%)
Query: 326 YLLS--VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YLL+ +H K +V+DL + + Y+ DA++ + + EN LS+E+EN RLFRL+ KL
Sbjct: 486 YLLNDKIHDK-SVMDLSKLFIDKIYSTFDALKTYSEFSENVLSRELENSRLFRLICKLNF 544
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G+++ + LF D++ HQV E+G+ +D++H++ CLNKLD G EK
Sbjct: 545 IFGRIESRIDINWSESGEKFPIILFYDFVFHQVDENGKSVMDLTHVLRCLNKLDVGVSEK 604
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELSSS 476
+ L++ DE + +++SY ELK ++ +F L+ S
Sbjct: 605 LVLVTPDEMNCIIISYKELKDLIESTFRSLTQS 637
>gi|350297190|gb|EGZ78167.1| PAB-dependent poly(A)-specific ribonuclease subunit pan-3
[Neurospora tetrasperma FGSC 2509]
Length = 656
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 118/202 (58%), Gaps = 4/202 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL---SVHQKRT 173
Q+D G++ILA+ + + N+ ++ + YS LR ++ +L+ + + +T
Sbjct: 447 QEDFVKFGRIILALATNT-PTLNFNNIDAALATIVPRYSTQLRGVLEWLIKPSAPGETKT 505
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
V L+ + + V D E L +E+ENGR+ RL+ KL +NER +
Sbjct: 506 VETLLGGMTTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGDSCGVHN 565
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
WSETG+R +LKLFRDY+ HQV DG+ LD +H ++CL+KLDA ++E+I L SRD +V
Sbjct: 566 WSETGERLLLKLFRDYVFHQVDADGKARLDTNHYLNCLSKLDASSEEQILLTSRDNATVF 625
Query: 294 VVSYAELKQCLDQSFHELSSSA 315
VVSY ++Q LD+++ EL +
Sbjct: 626 VVSYRSIRQMLDRAYGELGKES 647
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 91/146 (62%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+ +TV L+ + + V D E L +E+ENGR+ RL+ KL +NER +
Sbjct: 502 ETKTVETLLGGMTTHLANFANFVMQESDEKEFHLMRELENGRIARLMFKLSVVNERGDSC 561
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
WSETG+R +LKLFRDY+ HQV DG+ LD +H ++CL+KLDA ++E+I L SRD
Sbjct: 562 GVHNWSETGERLLLKLFRDYVFHQVDADGKARLDTNHYLNCLSKLDASSEEQILLTSRDN 621
Query: 452 QSVLVVSYAELKQCLDQSFHELSSSA 477
+V VVSY ++Q LD+++ EL +
Sbjct: 622 ATVFVVSYRSIRQMLDRAYGELGKES 647
>gi|401624859|gb|EJS42898.1| pan3p [Saccharomyces arboricola H-6]
Length = 682
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 105/156 (67%), Gaps = 1/156 (0%)
Query: 158 LRNLILYLLSVHQ-KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLL 216
++++ YLLS K+ V DL+ + + L++ Q + + +E+ LSKE+ENGRLFRL+
Sbjct: 526 FKDILKYLLSDDDAKKNVHDLISHFYDKMFMVLESSQTYTEYMESVLSKELENGRLFRLI 585
Query: 217 VKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDA 276
KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDA
Sbjct: 586 NKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDA 645
Query: 277 GTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
G QEK+ L++ DE + +++SY ELK +D +F ++
Sbjct: 646 GIQEKLMLVTPDELNCIIISYKELKDLIDSTFRSIT 681
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
Query: 326 YLLSVHQ-KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
YLLS K+ V DL+ + + L++ Q + + +E+ LSKE+ENGRLFRL+ KL I
Sbjct: 532 YLLSDDDAKKNVHDLISHFYDKMFMVLESSQTYTEYMESVLSKELENGRLFRLINKLNCI 591
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK+
Sbjct: 592 FGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEKL 651
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
L++ DE + +++SY ELK +D +F ++
Sbjct: 652 MLVTPDELNCIIISYKELKDLIDSTFRSIT 681
>gi|255711933|ref|XP_002552249.1| KLTH0C00484p [Lachancea thermotolerans]
gi|238933628|emb|CAR21811.1| KLTH0C00484p [Lachancea thermotolerans CBS 6340]
Length = 614
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 116/204 (56%), Gaps = 7/204 (3%)
Query: 109 EVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV 168
+ D + Q D LG L+ R L A + T I+ + D + ++ YLL
Sbjct: 417 DTDATKEQQKDFVDLGTLL-----RDLAAKSTGSQDTDIESLV--VDNDFKQVLNYLLEP 469
Query: 169 HQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL 228
+T+ +LM + + L ++Q + + E+ L++E+EN RLFRL+ KL I R E
Sbjct: 470 KSLKTLPELMALFSHKILPVLSSLQTYAEYTESILARELENARLFRLMCKLNFIFGRMES 529
Query: 229 NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD 288
+D WSE+G+++ + LF DY+ HQ E G+P +D++H++ CLNKLDAG EK+ L++ D
Sbjct: 530 RIDINWSESGEKFPIILFYDYVFHQSDESGKPVMDLTHVLRCLNKLDAGIGEKLMLVTPD 589
Query: 289 EQSVLVVSYAELKQCLDQSFHELS 312
E + + SY ELK +D +F LS
Sbjct: 590 EMNCFITSYKELKDLIDSTFRALS 613
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 95/149 (63%)
Query: 326 YLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 385
YLL +T+ +LM + + L ++Q + + E+ L++E+EN RLFRL+ KL I
Sbjct: 465 YLLEPKSLKTLPELMALFSHKILPVLSSLQTYAEYTESILARELENARLFRLMCKLNFIF 524
Query: 386 ERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKIC 445
R E +D WSE+G+++ + LF DY+ HQ E G+P +D++H++ CLNKLDAG EK+
Sbjct: 525 GRMESRIDINWSESGEKFPIILFYDYVFHQSDESGKPVMDLTHVLRCLNKLDAGIGEKLM 584
Query: 446 LMSRDEQSVLVVSYAELKQCLDQSFHELS 474
L++ DE + + SY ELK +D +F LS
Sbjct: 585 LVTPDEMNCFITSYKELKDLIDSTFRALS 613
>gi|167525910|ref|XP_001747289.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774124|gb|EDQ87756.1| predicted protein [Monosiga brevicollis MX1]
Length = 414
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 98/151 (64%), Gaps = 14/151 (9%)
Query: 172 RTVVDLMPMIGARYYTQLDAVQLHG----------DSLENELSKEMENGRLFRLLVKLGT 221
+T +LMPM+G R++ LD Q + D LE++L+KEM NG LFRLL KL T
Sbjct: 257 KTAAELMPMVGTRFFGMLDQQQKYAPALERMRCYVDVLESDLAKEMYNGHLFRLLSKLNT 316
Query: 222 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQE-DGRPWLDMSHIVHCLNKLDAGTQE 280
+ +RPE W E+GD YML+LF+ Y+ HQ Q G P++D++H+V CL+KLDA + E
Sbjct: 317 VVDRPE---QAQWQESGDTYMLRLFKHYMFHQAQPVSGAPFVDLAHVVQCLSKLDAQSPE 373
Query: 281 KICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
I L + D ++V++ SYAEL + LD +F +L
Sbjct: 374 IIALTTVDAKNVMLASYAELAKALDLNFTQL 404
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 98/151 (64%), Gaps = 14/151 (9%)
Query: 334 RTVVDLMPMIGARYYTQLDAVQLHG----------DSLENELSKEMENGRLFRLLVKLGT 383
+T +LMPM+G R++ LD Q + D LE++L+KEM NG LFRLL KL T
Sbjct: 257 KTAAELMPMVGTRFFGMLDQQQKYAPALERMRCYVDVLESDLAKEMYNGHLFRLLSKLNT 316
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQE-DGRPWLDMSHIVHCLNKLDAGTQE 442
+ +RPE W E+GD YML+LF+ Y+ HQ Q G P++D++H+V CL+KLDA + E
Sbjct: 317 VVDRPE---QAQWQESGDTYMLRLFKHYMFHQAQPVSGAPFVDLAHVVQCLSKLDAQSPE 373
Query: 443 KICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
I L + D ++V++ SYAEL + LD +F +L
Sbjct: 374 IIALTTVDAKNVMLASYAELAKALDLNFTQL 404
>gi|190409796|gb|EDV13061.1| Pab1p-dependent poly(A) ribonuclease 76 kDa subunit [Saccharomyces
cerevisiae RM11-1a]
gi|323332802|gb|EGA74207.1| Pan3p [Saccharomyces cerevisiae AWRI796]
Length = 679
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 110/169 (65%), Gaps = 3/169 (1%)
Query: 146 SIDLMARSYSADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
SID M R ++++ YL+S + K+ + DL + + L++ Q + + +E+ L
Sbjct: 511 SIDDM-RQIDDKFKDVLKYLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVL 569
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
S+E+ENGRLFRL+ KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D
Sbjct: 570 SRELENGRLFRLINKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMD 629
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++H++ CLNKLDAG QEK+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 630 LTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSIT 678
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Query: 326 YLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YL+S + K+ + DL + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL
Sbjct: 528 YLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLINKLNC 587
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK
Sbjct: 588 IFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEK 647
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 648 LMLVTPDELNCIIISYKELKDLIESTFRSIT 678
>gi|365764635|gb|EHN06157.1| Pan3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 679
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 110/169 (65%), Gaps = 3/169 (1%)
Query: 146 SIDLMARSYSADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
SID M R ++++ YL+S + K+ + DL + + L++ Q + + +E+ L
Sbjct: 511 SIDDM-RQIDDKFKDVLKYLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVL 569
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
S+E+ENGRLFRL+ KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D
Sbjct: 570 SRELENGRLFRLINKLNCIFGRIESRIDKNWSESGTKFPIILFYDYVFHQVDSNGKPIMD 629
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++H++ CLNKLDAG QEK+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 630 LTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFPSIT 678
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Query: 326 YLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YL+S + K+ + DL + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL
Sbjct: 528 YLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLINKLNC 587
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK
Sbjct: 588 IFGRIESRIDKNWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEK 647
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 648 LMLVTPDELNCIIISYKELKDLIESTFPSIT 678
>gi|256271540|gb|EEU06583.1| Pan3p [Saccharomyces cerevisiae JAY291]
Length = 679
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 110/169 (65%), Gaps = 3/169 (1%)
Query: 146 SIDLMARSYSADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
SID M R ++++ YL+S + K+ + DL + + L++ Q + + +E+ L
Sbjct: 511 SIDDM-RQIDDKFKDVLKYLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVL 569
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
S+E+ENGRLFRL+ KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D
Sbjct: 570 SRELENGRLFRLINKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMD 629
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++H++ CLNKLDAG QEK+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 630 LTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSIT 678
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Query: 326 YLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YL+S + K+ + DL + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL
Sbjct: 528 YLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLINKLNC 587
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK
Sbjct: 588 IFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEK 647
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 648 LMLVTPDELNCIIISYKELKDLIESTFRSIT 678
>gi|207343454|gb|EDZ70908.1| YKL025Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 620
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 110/169 (65%), Gaps = 3/169 (1%)
Query: 146 SIDLMARSYSADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
SID M R ++++ YL+S + K+ + DL + + L++ Q + + +E+ L
Sbjct: 452 SIDDM-RQIDDKFKDVLKYLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVL 510
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
S+E+ENGRLFRL+ KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D
Sbjct: 511 SRELENGRLFRLINKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMD 570
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++H++ CLNKLDAG QEK+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 571 LTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSIT 619
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Query: 326 YLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YL+S + K+ + DL + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL
Sbjct: 469 YLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLINKLNC 528
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK
Sbjct: 529 IFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEK 588
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 589 LMLVTPDELNCIIISYKELKDLIESTFRSIT 619
>gi|6322827|ref|NP_012900.1| Pan3p [Saccharomyces cerevisiae S288c]
gi|549662|sp|P36102.1|PAN3_YEAST RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|486021|emb|CAA81860.1| PAN3 [Saccharomyces cerevisiae]
gi|285813232|tpg|DAA09129.1| TPA: Pan3p [Saccharomyces cerevisiae S288c]
gi|392298111|gb|EIW09209.1| Pan3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 679
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 111/169 (65%), Gaps = 3/169 (1%)
Query: 146 SIDLMARSYSADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
SID M R ++++ YL+S + K+++ DL + + L++ Q + + +E+ L
Sbjct: 511 SIDDM-RQIDDKFKDVLKYLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVL 569
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
S+E+ENGRLFRL+ KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D
Sbjct: 570 SRELENGRLFRLVNKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMD 629
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++H++ CLNKLDAG QEK+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 630 LTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSIT 678
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
Query: 326 YLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YL+S + K+++ DL + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL
Sbjct: 528 YLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLVNKLNC 587
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK
Sbjct: 588 IFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEK 647
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 648 LMLVTPDELNCIIISYKELKDLIESTFRSIT 678
>gi|151941518|gb|EDN59881.1| Pab1p-dependent poly(A) ribonuclease (PAN) 76 kDa subunit
[Saccharomyces cerevisiae YJM789]
Length = 679
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 111/169 (65%), Gaps = 3/169 (1%)
Query: 146 SIDLMARSYSADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
SID M R ++++ YL+S + K+++ DL + + L++ Q + + +E+ L
Sbjct: 511 SIDDM-RQIDDKFKDVLKYLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVL 569
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
S+E+ENGRLFRL+ KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D
Sbjct: 570 SRELENGRLFRLVNKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMD 629
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++H++ CLNKLDAG QEK+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 630 LTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSIT 678
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
Query: 326 YLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YL+S + K+++ DL + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL
Sbjct: 528 YLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLVNKLNC 587
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK
Sbjct: 588 IFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEK 647
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 648 LMLVTPDELNCIIISYKELKDLIESTFRSIT 678
>gi|349579535|dbj|GAA24697.1| K7_Pan3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 679
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 111/169 (65%), Gaps = 3/169 (1%)
Query: 146 SIDLMARSYSADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
SID M R ++++ YL+S + K+++ DL + + L++ Q + + +E+ L
Sbjct: 511 SIDDM-RQIDDKFKDVLKYLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVL 569
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
S+E+ENGRLFRL+ KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D
Sbjct: 570 SRELENGRLFRLVNKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMD 629
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++H++ CLNKLDAG QEK+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 630 LTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSIT 678
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
Query: 326 YLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YL+S + K+++ DL + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL
Sbjct: 528 YLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLVNKLNC 587
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK
Sbjct: 588 IFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEK 647
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 648 LMLVTPDELNCIIISYKELKDLIESTFRSIT 678
>gi|323308193|gb|EGA61442.1| Pan3p [Saccharomyces cerevisiae FostersO]
Length = 679
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 110/169 (65%), Gaps = 3/169 (1%)
Query: 146 SIDLMARSYSADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
SID M R ++++ YL+S + K+ + DL + + L++ Q + + +E+ L
Sbjct: 511 SIDDM-RQIDDKFKDVLKYLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVL 569
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
S+E+ENGRLFRL+ KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D
Sbjct: 570 SRELENGRLFRLINKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMD 629
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++H++ CLNKLDAG QEK+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 630 LTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSIT 678
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Query: 326 YLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YL+S + K+ + DL + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL
Sbjct: 528 YLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLINKLNC 587
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK
Sbjct: 588 IFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEK 647
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 648 LMLVTPDELNCIIISYKELKDLIESTFRSIT 678
>gi|156840008|ref|XP_001643689.1| hypothetical protein Kpol_1057p18 [Vanderwaltozyma polyspora DSM
70294]
gi|156114310|gb|EDO15831.1| hypothetical protein Kpol_1057p18 [Vanderwaltozyma polyspora DSM
70294]
Length = 188
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 98/155 (63%)
Query: 320 KSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV 379
KS L L + K+ + +L + + + LDA Q + E LSKE+ENGRLFRL+
Sbjct: 33 KSVLNYLLDEDNDKKNIKELCSLFYDKLFDTLDAAQSLTEHTEGVLSKELENGRLFRLMC 92
Query: 380 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
KL I R E +D WSETG+++ + LF DY+ HQV E G+ +D++H++ CLNKLDAG
Sbjct: 93 KLNCIFGRMESRVDIKWSETGEKFPIILFYDYVFHQVDETGKAVMDLTHVLRCLNKLDAG 152
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
EKI L++ DE + +++SY ELK +D +F L+
Sbjct: 153 VHEKIMLVTPDEMNCIIISYKELKDLVDSTFRTLT 187
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
Query: 158 LRNLILYLLSV-HQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLL 216
++++ YLL + K+ + +L + + + LDA Q + E LSKE+ENGRLFRL+
Sbjct: 32 FKSVLNYLLDEDNDKKNIKELCSLFYDKLFDTLDAAQSLTEHTEGVLSKELENGRLFRLM 91
Query: 217 VKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDA 276
KL I R E +D WSETG+++ + LF DY+ HQV E G+ +D++H++ CLNKLDA
Sbjct: 92 CKLNCIFGRMESRVDIKWSETGEKFPIILFYDYVFHQVDETGKAVMDLTHVLRCLNKLDA 151
Query: 277 GTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
G EKI L++ DE + +++SY ELK +D +F L+
Sbjct: 152 GVHEKIMLVTPDEMNCIIISYKELKDLVDSTFRTLT 187
>gi|299473543|emb|CBN77938.1| Poly(A) ribonuclease subunit [Ectocarpus siliculosus]
Length = 673
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
+ D+ LG LILA+ CR + V S+ A+ Y+ +L NL L+S + +V +
Sbjct: 363 RQDMVDLGSLILALACRHPVTVASRG--ESLAFTAQHYTPELHNLAASLVS-KKPPSVFE 419
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
+ ++ + +L+ L+ E +NGRL RLL+KLGT+NERP+ WSE
Sbjct: 420 VCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSE 479
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 296
TG+RY+LKLFRDYL HQV DG P +D H+ L+ LDAG +EKI L SRD +S+LVVS
Sbjct: 480 TGERYILKLFRDYLFHQVDADGEPVMDFGHVYQSLSLLDAGNEEKILLTSRDRRSLLVVS 539
Query: 297 YAELKQCLDQSFHEL 311
+A++K+CL+++F E+
Sbjct: 540 FADVKRCLEEAFAEV 554
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 87/114 (76%)
Query: 360 SLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQED 419
+L+ L+ E +NGRL RLL+KLGT+NERP+ WSETG+RY+LKLFRDYL HQV D
Sbjct: 441 ALQGHLASEYDNGRLLRLLLKLGTLNERPDQGGVGEWSETGERYILKLFRDYLFHQVDAD 500
Query: 420 GRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
G P +D H+ L+ LDAG +EKI L SRD +S+LVVS+A++K+CL+++F E+
Sbjct: 501 GEPVMDFGHVYQSLSLLDAGNEEKILLTSRDRRSLLVVSFADVKRCLEEAFAEV 554
>gi|367007354|ref|XP_003688407.1| hypothetical protein TPHA_0N01920 [Tetrapisispora phaffii CBS 4417]
gi|357526715|emb|CCE65973.1| hypothetical protein TPHA_0N01920 [Tetrapisispora phaffii CBS 4417]
Length = 780
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 105/161 (65%), Gaps = 1/161 (0%)
Query: 153 SYSADLRNLILYLLS-VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGR 211
S + + ++ YLL + K+ + +L + + + LD+ Q + E+ LSKE+ENGR
Sbjct: 619 SVDENFKEVLKYLLDDSNTKKNIKELSHIFSDKLFELLDSSQSLTEYTESVLSKELENGR 678
Query: 212 LFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCL 271
LFRL+ KL I R E +D WS++G+++ + LF DY+ HQV E G+P++D++HI+ CL
Sbjct: 679 LFRLICKLNCIFGRMESRVDINWSDSGEKFPIILFYDYVFHQVDETGKPFVDLTHILRCL 738
Query: 272 NKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
NKLD+G EKI L++ DE + +++SY ELK ++ +F L+
Sbjct: 739 NKLDSGVAEKIMLVTPDEMNCIIISYKELKDLVETTFRSLT 779
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 100/155 (64%)
Query: 320 KSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV 379
K L L + K+ + +L + + + LD+ Q + E+ LSKE+ENGRLFRL+
Sbjct: 625 KEVLKYLLDDSNTKKNIKELSHIFSDKLFELLDSSQSLTEYTESVLSKELENGRLFRLIC 684
Query: 380 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
KL I R E +D WS++G+++ + LF DY+ HQV E G+P++D++HI+ CLNKLD+G
Sbjct: 685 KLNCIFGRMESRVDINWSDSGEKFPIILFYDYVFHQVDETGKPFVDLTHILRCLNKLDSG 744
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
EKI L++ DE + +++SY ELK ++ +F L+
Sbjct: 745 VAEKIMLVTPDEMNCIIISYKELKDLVETTFRSLT 779
>gi|259147808|emb|CAY81058.1| Pan3p [Saccharomyces cerevisiae EC1118]
Length = 679
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 110/169 (65%), Gaps = 3/169 (1%)
Query: 146 SIDLMARSYSADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
SID M R ++++ YL+S + K+ + DL + + L++ Q + + +E+ L
Sbjct: 511 SIDDM-RQIDDKFKDVLKYLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVL 569
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
S+E+ENGRLFR++ KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D
Sbjct: 570 SRELENGRLFRMINKLNCIFGRIESRIDKNWSESGTKFPIILFYDYVFHQVDSNGKPIMD 629
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++H++ CLNKLDAG QEK+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 630 LTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFPSIT 678
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Query: 326 YLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YL+S + K+ + DL + + L++ Q + + +E+ LS+E+ENGRLFR++ KL
Sbjct: 528 YLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRMINKLNC 587
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK
Sbjct: 588 IFGRIESRIDKNWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEK 647
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 648 LMLVTPDELNCIIISYKELKDLIESTFPSIT 678
>gi|323304110|gb|EGA57888.1| Pan3p [Saccharomyces cerevisiae FostersB]
Length = 679
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 109/169 (64%), Gaps = 3/169 (1%)
Query: 146 SIDLMARSYSADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
SID M R ++++ YL+S + K+ + DL + + L++ Q + + +E+ L
Sbjct: 511 SIDXM-RQIDDKXKDVLKYLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVL 569
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
S+E+ENGRLFRL KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D
Sbjct: 570 SRELENGRLFRLXNKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMD 629
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++H++ CLNKLDAG QEK+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 630 LTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSIT 678
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 100/151 (66%), Gaps = 2/151 (1%)
Query: 326 YLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YL+S + K+ + DL + + L++ Q + + +E+ LS+E+ENGRLFRL KL
Sbjct: 528 YLISDNGDSKKNIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLXNKLNC 587
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK
Sbjct: 588 IFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEK 647
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 648 LMLVTPDELNCIIISYKELKDLIESTFRSIT 678
>gi|300175158|emb|CBK20469.2| unnamed protein product [Blastocystis hominis]
Length = 562
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 114 HDLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKR 172
DLQ DL LG L++ + CR + I +A YS ++ LLS
Sbjct: 334 QDLQAKDLYQLGSLLVVLGCR--------GVPPDIKTLAVHYSEKFVKVVQLLLSAQSPA 385
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
+VV + A+ L++ D+ N+L KE NGR RLL KL +NERP+
Sbjct: 386 SVV--LEQCTAQIVKTLNSSLSTCDTYYNDLRKEYANGRYMRLLTKLAFVNERPDEKGGY 443
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
+WS+TGDRY+L+LFRD++ HQ E+GR +D H++ L KLD G E I L S D ++V
Sbjct: 444 SWSDTGDRYILRLFRDFVFHQKDEEGRAVVDFGHVIDSLAKLDVGDPETIPLCSPDGKTV 503
Query: 293 LVVSYAELKQCLDQSFHELSSS 314
LV SY ++++CL+ + EL ++
Sbjct: 504 LVCSYGDVRRCLENVYSELMAA 525
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 79/118 (66%)
Query: 359 DSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQE 418
D+ N+L KE NGR RLL KL +NERP+ +WS+TGDRY+L+LFRD++ HQ E
Sbjct: 408 DTYYNDLRKEYANGRYMRLLTKLAFVNERPDEKGGYSWSDTGDRYILRLFRDFVFHQKDE 467
Query: 419 DGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSS 476
+GR +D H++ L KLD G E I L S D ++VLV SY ++++CL+ + EL ++
Sbjct: 468 EGRAVVDFGHVIDSLAKLDVGDPETIPLCSPDGKTVLVCSYGDVRRCLENVYSELMAA 525
>gi|323354113|gb|EGA85959.1| Pan3p [Saccharomyces cerevisiae VL3]
Length = 679
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 109/169 (64%), Gaps = 3/169 (1%)
Query: 146 SIDLMARSYSADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
SID M R ++++ YL+S + K+ + DL + + L++ Q + + +E+ L
Sbjct: 511 SIDDM-RQIDDKFKDVLKYLISDNGDSKKXIHDLTSHFYDKMFMVLESSQTYTEYMESVL 569
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
S+E+ENGRLFRL KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D
Sbjct: 570 SRELENGRLFRLXNKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMD 629
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++H++ CLNKLDAG QEK+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 630 LTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSIT 678
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 100/151 (66%), Gaps = 2/151 (1%)
Query: 326 YLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YL+S + K+ + DL + + L++ Q + + +E+ LS+E+ENGRLFRL KL
Sbjct: 528 YLISDNGDSKKXIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLXNKLNC 587
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK
Sbjct: 588 IFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEK 647
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 648 LMLVTPDELNCIIISYKELKDLIESTFRSIT 678
>gi|403216933|emb|CCK71428.1| hypothetical protein KNAG_0H00120 [Kazachstania naganishii CBS
8797]
Length = 673
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 119/203 (58%), Gaps = 5/203 (2%)
Query: 111 DNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL-SVH 169
D + + D LG L++ ++ + NLQT ID + + ++ YL + +
Sbjct: 475 DMHTERNKDFEQLGNLLIRLSS-CINNGTEGNLQT-IDSLP--VDDKFKKVLTYLKDTAN 530
Query: 170 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
Q + + DL + + +T D+++ + + E L++E+EN RLFRL+ K+ I R E
Sbjct: 531 QNKNISDLSSLFIDKIFTVFDSMKTYAEYTEKILARELENARLFRLMCKMNCIFGRTESR 590
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
+D WSE+G+++ + LF D++ HQ+ E G+ +D++HI+ CLNKLDAG QEKI L + D
Sbjct: 591 IDINWSESGEKFPIILFYDFVFHQMDESGKAIVDLTHILRCLNKLDAGAQEKIMLATSDN 650
Query: 290 QSVLVVSYAELKQCLDQSFHELS 312
+ +++SY ELK +D +F ++
Sbjct: 651 MNCIIISYKELKDLIDSTFRSMT 673
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 95/146 (65%)
Query: 329 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 388
+ +Q + + DL + + +T D+++ + + E L++E+EN RLFRL+ K+ I R
Sbjct: 528 TANQNKNISDLSSLFIDKIFTVFDSMKTYAEYTEKILARELENARLFRLMCKMNCIFGRT 587
Query: 389 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 448
E +D WSE+G+++ + LF D++ HQ+ E G+ +D++HI+ CLNKLDAG QEKI L +
Sbjct: 588 ESRIDINWSESGEKFPIILFYDFVFHQMDESGKAIVDLTHILRCLNKLDAGAQEKIMLAT 647
Query: 449 RDEQSVLVVSYAELKQCLDQSFHELS 474
D + +++SY ELK +D +F ++
Sbjct: 648 SDNMNCIIISYKELKDLIDSTFRSMT 673
>gi|294656752|ref|XP_459065.2| DEHA2D13530p [Debaryomyces hansenii CBS767]
gi|218511746|sp|Q6BRV5.2|PAN3_DEBHA RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|199431714|emb|CAG87233.2| DEHA2D13530p [Debaryomyces hansenii CBS767]
Length = 660
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 114/205 (55%), Gaps = 7/205 (3%)
Query: 114 HDLQD-DLTALGKLILAMTCRSLMAVQRENLQTS-IDLMARSYSADLRNLILYLLSVHQK 171
H+LQ D+ GKLIL + L R + I L+ S + + + LL+
Sbjct: 455 HELQQADIKKFGKLILDLAALCLPNNARNHEPKDLISLLKTSTTVNFSGEFINLLTELNM 514
Query: 172 RTVVDLMPM----IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPE 227
T DL + R Q D +E++LS E+EN R+FRL+ KL I +RPE
Sbjct: 515 NTS-DLQEFNRNHLSRRILNFCSNAQDSQDFMESQLSTELENARVFRLITKLNFIIDRPE 573
Query: 228 LNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSR 287
+ DP W E G++Y++KLFRDY+ Q E G+P D+S ++ LNKLDAG EK L+++
Sbjct: 574 YDNDPNWQENGNKYIIKLFRDYIFFQYDEFGKPVCDLSRVLTNLNKLDAGIDEKFLLVNK 633
Query: 288 DEQSVLVVSYAELKQCLDQSFHELS 312
DE++ ++VSY E++ +D +F L+
Sbjct: 634 DEKNCIIVSYKEIRDIIDSAFRTLT 658
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 83/116 (71%)
Query: 359 DSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQE 418
D +E++LS E+EN R+FRL+ KL I +RPE + DP W E G++Y++KLFRDY+ Q E
Sbjct: 543 DFMESQLSTELENARVFRLITKLNFIIDRPEYDNDPNWQENGNKYIIKLFRDYIFFQYDE 602
Query: 419 DGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
G+P D+S ++ LNKLDAG EK L+++DE++ ++VSY E++ +D +F L+
Sbjct: 603 FGKPVCDLSRVLTNLNKLDAGIDEKFLLVNKDEKNCIIVSYKEIRDIIDSAFRTLT 658
>gi|300123219|emb|CBK24492.2| unnamed protein product [Blastocystis hominis]
Length = 254
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 112/202 (55%), Gaps = 10/202 (4%)
Query: 114 HDLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKR 172
DLQ DL LG L++ + CR + I +A YS ++ LLS
Sbjct: 25 QDLQAKDLYQLGSLLVVLGCRGAVF-------PDIKTLAVHYSEKFVKVVQLLLSAQSPA 77
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
+VV + A+ L++ D+ N+L KE NGR RLL KL +NERP+
Sbjct: 78 SVV--LEQCTAQIVKTLNSSLSTCDTYYNDLRKEYANGRYMRLLTKLAFVNERPDEKGGY 135
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
+WS+TGDRY+L+LFRD++ HQ E+GR +D H++ L KLD G E I L S D ++V
Sbjct: 136 SWSDTGDRYILRLFRDFVFHQKDEEGRAVVDFGHVIDSLAKLDVGDPETIPLCSPDGKTV 195
Query: 293 LVVSYAELKQCLDQSFHELSSS 314
LV SY ++++CL+ + EL ++
Sbjct: 196 LVCSYGDVRRCLENVYSELMAA 217
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 79/118 (66%)
Query: 359 DSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQE 418
D+ N+L KE NGR RLL KL +NERP+ +WS+TGDRY+L+LFRD++ HQ E
Sbjct: 100 DTYYNDLRKEYANGRYMRLLTKLAFVNERPDEKGGYSWSDTGDRYILRLFRDFVFHQKDE 159
Query: 419 DGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSS 476
+GR +D H++ L KLD G E I L S D ++VLV SY ++++CL+ + EL ++
Sbjct: 160 EGRAVVDFGHVIDSLAKLDVGDPETIPLCSPDGKTVLVCSYGDVRRCLENVYSELMAA 217
>gi|254580940|ref|XP_002496455.1| ZYRO0D00484p [Zygosaccharomyces rouxii]
gi|238939347|emb|CAR27522.1| ZYRO0D00484p [Zygosaccharomyces rouxii]
Length = 626
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 116/195 (59%), Gaps = 5/195 (2%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
Q+ LG L++ + + + + S+D + ++++ YLLS + ++V +
Sbjct: 435 QESFGKLGNLLIELATK--LGPEGGAQTESVDNLV--VDEKFKDVLKYLLS-DKPKSVTE 489
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
L M + ++ +++ + + E LSKE+ENGRLFRL+ KL I R E +D WSE
Sbjct: 490 LTCMFHDKIFSVINSSLTYAEYTEGVLSKELENGRLFRLICKLNFIYGRMEHRIDVNWSE 549
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVS 296
+GD++ + LF DY+ HQV G+ +D++H++ CLNKLDAG EKI L++ DE + ++VS
Sbjct: 550 SGDKFPILLFYDYVFHQVDATGKNIMDLTHVLRCLNKLDAGVLEKIALVTPDEMNCIIVS 609
Query: 297 YAELKQCLDQSFHEL 311
Y EL+ +D +F L
Sbjct: 610 YKELRDLIDTTFRIL 624
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
Query: 326 YLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 385
YLLS + ++V +L M + ++ +++ + + E LSKE+ENGRLFRL+ KL I
Sbjct: 478 YLLS-DKPKSVTELTCMFHDKIFSVINSSLTYAEYTEGVLSKELENGRLFRLICKLNFIY 536
Query: 386 ERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKIC 445
R E +D WSE+GD++ + LF DY+ HQV G+ +D++H++ CLNKLDAG EKI
Sbjct: 537 GRMEHRIDVNWSESGDKFPILLFYDYVFHQVDATGKNIMDLTHVLRCLNKLDAGVLEKIA 596
Query: 446 LMSRDEQSVLVVSYAELKQCLDQSFHEL 473
L++ DE + ++VSY EL+ +D +F L
Sbjct: 597 LVTPDEMNCIIVSYKELRDLIDTTFRIL 624
>gi|365759661|gb|EHN01438.1| Pan3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 680
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 96/143 (67%)
Query: 170 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
+K+++ L + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL I R E
Sbjct: 537 EKKSIHGLTSHFFDKMFMVLESSQTYTEYMESVLSRELENGRLFRLINKLNCIFGRIESR 596
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
+D WSE+G ++ + LF DY+ HQV G+P +D++H++ CLNKLDAG QEK+ L++ DE
Sbjct: 597 IDINWSESGTKFPIILFYDYIFHQVDSTGKPIMDLTHVLRCLNKLDAGIQEKLMLVTPDE 656
Query: 290 QSVLVVSYAELKQCLDQSFHELS 312
+ +++SY ELK +D +F ++
Sbjct: 657 LNCIIISYKELKDLIDSTFRSIT 679
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 96/143 (67%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+K+++ L + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL I R E
Sbjct: 537 EKKSIHGLTSHFFDKMFMVLESSQTYTEYMESVLSRELENGRLFRLINKLNCIFGRIESR 596
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
+D WSE+G ++ + LF DY+ HQV G+P +D++H++ CLNKLDAG QEK+ L++ DE
Sbjct: 597 IDINWSESGTKFPIILFYDYIFHQVDSTGKPIMDLTHVLRCLNKLDAGIQEKLMLVTPDE 656
Query: 452 QSVLVVSYAELKQCLDQSFHELS 474
+ +++SY ELK +D +F ++
Sbjct: 657 LNCIIISYKELKDLIDSTFRSIT 679
>gi|401842180|gb|EJT44436.1| PAN3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 680
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 96/143 (67%)
Query: 170 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
+K+++ L + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL I R E
Sbjct: 537 EKKSIHGLTSHFFDKMFMVLESSQTYTEYMESVLSRELENGRLFRLINKLNCIFGRIESR 596
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
+D WSE+G ++ + LF DY+ HQV G+P +D++H++ CLNKLDAG QEK+ L++ DE
Sbjct: 597 IDINWSESGTKFPIILFYDYIFHQVDSTGKPIMDLTHVLRCLNKLDAGIQEKLMLVTPDE 656
Query: 290 QSVLVVSYAELKQCLDQSFHELS 312
+ +++SY ELK +D +F ++
Sbjct: 657 LNCIIISYKELKDLIDSTFRSIT 679
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 96/143 (67%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+K+++ L + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL I R E
Sbjct: 537 EKKSIHGLTSHFFDKMFMVLESSQTYTEYMESVLSRELENGRLFRLINKLNCIFGRIESR 596
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
+D WSE+G ++ + LF DY+ HQV G+P +D++H++ CLNKLDAG QEK+ L++ DE
Sbjct: 597 IDINWSESGTKFPIILFYDYIFHQVDSTGKPIMDLTHVLRCLNKLDAGIQEKLMLVTPDE 656
Query: 452 QSVLVVSYAELKQCLDQSFHELS 474
+ +++SY ELK +D +F ++
Sbjct: 657 LNCIIISYKELKDLIDSTFRSIT 679
>gi|367011208|ref|XP_003680105.1| hypothetical protein TDEL_0B07650 [Torulaspora delbrueckii]
gi|359747763|emb|CCE90894.1| hypothetical protein TDEL_0B07650 [Torulaspora delbrueckii]
Length = 665
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 119/210 (56%), Gaps = 12/210 (5%)
Query: 108 LEVDNYHDL----QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLIL 163
L + +HDL Q+D LG L+ R L + N SID + S ++++
Sbjct: 462 LRYNEHHDLHAEQQEDYKKLGNLL-----RDLASKIGPNKDPSIDDLVVEES--FKSVLK 514
Query: 164 YLL-SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 222
YLL + + + L + + Y+ +D+ + + E LS+E+ENGRLFRL+ KL I
Sbjct: 515 YLLDEENSNKDIRTLTMLFYEKLYSCVDSSLSYTEYTEGVLSRELENGRLFRLMCKLNCI 574
Query: 223 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 282
R E +D WSE+G ++ + LF D++ HQV G+ LD++H++ CLNKLDAG EKI
Sbjct: 575 YGRMESRIDVDWSESGGKFPIVLFYDFVFHQVDASGKNILDLTHVLRCLNKLDAGVSEKI 634
Query: 283 CLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
L + DE + +++SY ELK +D +F L+
Sbjct: 635 VLATPDEMNCIIISYKELKDLIDYTFRSLA 664
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 94/155 (60%)
Query: 320 KSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV 379
KS L L + + + L + + Y+ +D+ + + E LS+E+ENGRLFRL+
Sbjct: 510 KSVLKYLLDEENSNKDIRTLTMLFYEKLYSCVDSSLSYTEYTEGVLSRELENGRLFRLMC 569
Query: 380 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
KL I R E +D WSE+G ++ + LF D++ HQV G+ LD++H++ CLNKLDAG
Sbjct: 570 KLNCIYGRMESRIDVDWSESGGKFPIVLFYDFVFHQVDASGKNILDLTHVLRCLNKLDAG 629
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
EKI L + DE + +++SY ELK +D +F L+
Sbjct: 630 VSEKIVLATPDEMNCIIISYKELKDLIDYTFRSLA 664
>gi|366996502|ref|XP_003678014.1| hypothetical protein NCAS_0H03580 [Naumovozyma castellii CBS 4309]
gi|342303884|emb|CCC71668.1| hypothetical protein NCAS_0H03580 [Naumovozyma castellii CBS 4309]
Length = 645
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 129/230 (56%), Gaps = 16/230 (6%)
Query: 84 RAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENL 143
R ++ A+ ++ AN EL D + Q D LG+L+ + + N
Sbjct: 430 RIKLSGCGAIDVLGANEEL--------DLHSKQQMDFENLGQLLFKLASKI-----GNNA 476
Query: 144 QTSIDLMARSYSADLRNLILYLLS-VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENE 202
ID + S + ++ YLL+ + ++T+ +L + + + +++ Q + + E
Sbjct: 477 NAKIDEL--SVDDQFKTVLQYLLNDTNDRKTINELSQLFIDKILSNVESSQGYAEYTEGI 534
Query: 203 LSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWL 262
LS+E+ENGRLFRL+ KL I + E +D WSE+G+++ + LF D++ HQV E G+ +
Sbjct: 535 LSRELENGRLFRLICKLNFIFGKIESRVDINWSESGEKFPIILFYDFVFHQVDETGKSVM 594
Query: 263 DMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
D++H++ CLNKLDAG EK+ L + DE + +++SY ELK +D +F ++
Sbjct: 595 DLTHVLRCLNKLDAGAPEKLILATPDEMNCIIISYKELKDLIDTTFRSMT 644
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 99/155 (63%)
Query: 320 KSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV 379
K+ L L + ++T+ +L + + + +++ Q + + E LS+E+ENGRLFRL+
Sbjct: 490 KTVLQYLLNDTNDRKTINELSQLFIDKILSNVESSQGYAEYTEGILSRELENGRLFRLIC 549
Query: 380 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
KL I + E +D WSE+G+++ + LF D++ HQV E G+ +D++H++ CLNKLDAG
Sbjct: 550 KLNFIFGKIESRVDINWSESGEKFPIILFYDFVFHQVDETGKSVMDLTHVLRCLNKLDAG 609
Query: 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
EK+ L + DE + +++SY ELK +D +F ++
Sbjct: 610 APEKLILATPDEMNCIIISYKELKDLIDTTFRSMT 644
>gi|444313461|ref|XP_004177388.1| hypothetical protein TBLA_0A00670 [Tetrapisispora blattae CBS 6284]
gi|387510427|emb|CCH57869.1| hypothetical protein TBLA_0A00670 [Tetrapisispora blattae CBS 6284]
Length = 757
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 87/128 (67%)
Query: 184 RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYML 243
+ + L+ Q H + +EN L+KE+EN RLFRL+ KL I R E +D WSE+G+++ +
Sbjct: 629 KIFEYLNVSQKHIEYIENILAKELENARLFRLICKLNCIFGRLESRIDINWSESGEKFPI 688
Query: 244 KLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQC 303
LF DY+ HQV G+ +D++H++ CLNKLDAG +EKI L++ DE + +++SY ELK
Sbjct: 689 ILFYDYVFHQVNNTGKSVMDLTHVIRCLNKLDAGVKEKIMLVTPDEMNCIIISYKELKNL 748
Query: 304 LDQSFHEL 311
+D +F +
Sbjct: 749 IDMTFRSM 756
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 87/128 (67%)
Query: 346 RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYML 405
+ + L+ Q H + +EN L+KE+EN RLFRL+ KL I R E +D WSE+G+++ +
Sbjct: 629 KIFEYLNVSQKHIEYIENILAKELENARLFRLICKLNCIFGRLESRIDINWSESGEKFPI 688
Query: 406 KLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQC 465
LF DY+ HQV G+ +D++H++ CLNKLDAG +EKI L++ DE + +++SY ELK
Sbjct: 689 ILFYDYVFHQVNNTGKSVMDLTHVIRCLNKLDAGVKEKIMLVTPDEMNCIIISYKELKNL 748
Query: 466 LDQSFHEL 473
+D +F +
Sbjct: 749 IDMTFRSM 756
>gi|443921832|gb|ELU41373.1| protein tyrosine kinase domain-containing protein [Rhizoctonia
solani AG-1 IA]
Length = 669
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 118/189 (62%), Gaps = 23/189 (12%)
Query: 131 TCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIG-ARYYTQL 189
T + +V ++NL S ++R +S LR +++L++ +T+ L I A ++
Sbjct: 432 TNNNANSVNQQNL-ASAQALSR-FSPLLRQTVVWLVTPAVGKTIEHLFKEISPAIIGAEM 489
Query: 190 DAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDY 249
DA+ D+LE+ELS+E+ENGRL RL + DP W+ETGDRY++KLFRD+
Sbjct: 490 DAMLDQADTLESELSRELENGRLVRLF------------DHDPRWAETGDRYIIKLFRDH 537
Query: 250 LLHQVQEDGRPWLDMSHIVHCLNK--------LDAGTQEKICLMSRDEQSVLVVSYAELK 301
+ HQV G+P L+++H++ L+K LDAG++E++ L+SRDE++ LVVSY E+K
Sbjct: 538 VFHQVDARGKPVLNLTHVLVNLSKVSKLSLQDLDAGSEERLMLVSRDERNCLVVSYKEIK 597
Query: 302 QCLDQSFHE 310
C++ ++ +
Sbjct: 598 TCIENAYRK 606
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 94/139 (67%), Gaps = 24/139 (17%)
Query: 342 MIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGD 401
+IGA ++DA+ D+LE+ELS+E+ENGRL RL + DP W+ETGD
Sbjct: 484 IIGA----EMDAMLDQADTLESELSRELENGRLVRLF------------DHDPRWAETGD 527
Query: 402 RYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNK--------LDAGTQEKICLMSRDEQS 453
RY++KLFRD++ HQV G+P L+++H++ L+K LDAG++E++ L+SRDE++
Sbjct: 528 RYIIKLFRDHVFHQVDARGKPVLNLTHVLVNLSKVSKLSLQDLDAGSEERLMLVSRDERN 587
Query: 454 VLVVSYAELKQCLDQSFHE 472
LVVSY E+K C++ ++ +
Sbjct: 588 CLVVSYKEIKTCIENAYRK 606
>gi|50293581|ref|XP_449202.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608572|sp|Q6FKP2.1|PAN3_CANGA RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|49528515|emb|CAG62172.1| unnamed protein product [Candida glabrata]
Length = 717
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 103/166 (62%), Gaps = 11/166 (6%)
Query: 155 SADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAV-------QLHGDSLENELSKEM 207
S L+NLI L + Q V++ +I Y LD V Q + + EN LS+E+
Sbjct: 554 SEKLKNLIKSL-AFEQLHDYVNVATII--EKYIGLDVVFKVMEAQQTYSEYAENVLSREL 610
Query: 208 ENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQED-GRPWLDMSH 266
ENGRLFRL+ KL I R E LD WSE GD++++ LF DY+ HQ+ + G+P D++H
Sbjct: 611 ENGRLFRLICKLNFIFGRVENRLDINWSEPGDKFVIVLFYDYVFHQIDPNTGKPVTDLTH 670
Query: 267 IVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++ CLNKLDAG +E I L++ DE + VVSY ++K+ +D++F ++
Sbjct: 671 VLRCLNKLDAGVEENILLVTPDELNTAVVSYKKVKELVDKTFRAMT 716
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Query: 348 YTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKL 407
+ ++A Q + + EN LS+E+ENGRLFRL+ KL I R E LD WSE GD++++ L
Sbjct: 589 FKVMEAQQTYSEYAENVLSRELENGRLFRLICKLNFIFGRVENRLDINWSEPGDKFVIVL 648
Query: 408 FRDYLLHQVQED-GRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCL 466
F DY+ HQ+ + G+P D++H++ CLNKLDAG +E I L++ DE + VVSY ++K+ +
Sbjct: 649 FYDYVFHQIDPNTGKPVTDLTHVLRCLNKLDAGVEENILLVTPDELNTAVVSYKKVKELV 708
Query: 467 DQSFHELS 474
D++F ++
Sbjct: 709 DKTFRAMT 716
>gi|150864054|ref|XP_001382738.2| hypothetical protein PICST_76360 [Scheffersomyces stipitis CBS
6054]
gi|158513697|sp|A3LQL9.2|PAN3_PICST RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|149385310|gb|ABN64709.2| component of Pab1p-stimulated poly(A) ribonuclease [Scheffersomyces
stipitis CBS 6054]
Length = 630
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 119/202 (58%), Gaps = 9/202 (4%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSI-DLMARSYSADLRNLILYLLSVHQKRTVV 175
++D+ LG+++L+++ ++ R N + + S + + + +L+V + TV
Sbjct: 430 REDIKKLGRILLSLSTLTIPNTLRNNDTGELLRHLKTSSTISFSDEFIQVLTVLNEDTVE 489
Query: 176 DLMPMIGARY-----YTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
+ RY ++ ++ ++ D +E++++ E+EN RLFRLL KL I +RPE
Sbjct: 490 FDLDRFSQRYLTTRLFSTINNLEDSTDFMESQITTELENARLFRLLTKLNFIIDRPEAK- 548
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
W+E ++Y++KLFRDY+ Q E G+P +D+S ++ LNKLDAG EK L+SRDE+
Sbjct: 549 --DWTENSNKYIIKLFRDYIFFQHDEYGKPVVDLSRVLTNLNKLDAGIDEKFLLVSRDEK 606
Query: 291 SVLVVSYAELKQCLDQSFHELS 312
+ ++VSY E++ +D F L+
Sbjct: 607 NCIIVSYKEIRDTIDSVFRNLT 628
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 88/132 (66%), Gaps = 3/132 (2%)
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDR 402
+ R ++ ++ ++ D +E++++ E+EN RLFRLL KL I +RPE W+E ++
Sbjct: 500 LTTRLFSTINNLEDSTDFMESQITTELENARLFRLLTKLNFIIDRPEAK---DWTENSNK 556
Query: 403 YMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAEL 462
Y++KLFRDY+ Q E G+P +D+S ++ LNKLDAG EK L+SRDE++ ++VSY E+
Sbjct: 557 YIIKLFRDYIFFQHDEYGKPVVDLSRVLTNLNKLDAGIDEKFLLVSRDEKNCIIVSYKEI 616
Query: 463 KQCLDQSFHELS 474
+ +D F L+
Sbjct: 617 RDTIDSVFRNLT 628
>gi|50308627|ref|XP_454316.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690163|sp|Q6CP23.1|PAN3_KLULA RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|49643451|emb|CAG99403.1| KLLA0E08097p [Kluyveromyces lactis]
Length = 656
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 103/165 (62%), Gaps = 3/165 (1%)
Query: 151 ARSYSAD--LRNLILYLL-SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEM 207
+SY D + I YL + + + + D + + + ++++Q + + LE +LS+E+
Sbjct: 491 VKSYHIDPLFKKCIQYLQDTSNNNKNIEDFTKLFSHKVLSVVNSLQYNSEYLEQQLSREL 550
Query: 208 ENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHI 267
EN RLFRL+ KL I R E +D W+E+G+++ + LF DY+ HQ + G+ +D++H+
Sbjct: 551 ENARLFRLMCKLNAIYGRLESRIDINWAESGEKFPIILFFDYVFHQKDDTGKNVMDLTHV 610
Query: 268 VHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
+ CLNKLDAG E++ L++ DE + +++SY ELK +D +F L+
Sbjct: 611 LRCLNKLDAGVSERLMLVTPDEMNCIIISYKELKDLIDSTFRALT 655
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 94/144 (65%)
Query: 331 HQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL 390
+ + + D + + + ++++Q + + LE +LS+E+EN RLFRL+ KL I R E
Sbjct: 512 NNNKNIEDFTKLFSHKVLSVVNSLQYNSEYLEQQLSRELENARLFRLMCKLNAIYGRLES 571
Query: 391 NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD 450
+D W+E+G+++ + LF DY+ HQ + G+ +D++H++ CLNKLDAG E++ L++ D
Sbjct: 572 RIDINWAESGEKFPIILFFDYVFHQKDDTGKNVMDLTHVLRCLNKLDAGVSERLMLVTPD 631
Query: 451 EQSVLVVSYAELKQCLDQSFHELS 474
E + +++SY ELK +D +F L+
Sbjct: 632 EMNCIIISYKELKDLIDSTFRALT 655
>gi|302419875|ref|XP_003007768.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Verticillium albo-atrum VaMs.102]
gi|261353419|gb|EEY15847.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Verticillium albo-atrum VaMs.102]
Length = 438
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 99/165 (60%), Gaps = 4/165 (2%)
Query: 117 QDDLTALGKLILAMTCRS-LMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK---R 172
Q+DLT +G+L++++ + ++ N+ + M +S L N +++L+ Q +
Sbjct: 245 QEDLTQVGRLMISLASNTPANSITANNVNIIMQQMGNMFSEPLVNSLMWLVYPSQNGETK 304
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
T+ + I ++ LD + D+L + L E+ENGRLFRLL +LGTINER E + D
Sbjct: 305 TIETFLSKISSQIMANLDMMLHQNDALTSNLYSEIENGRLFRLLCRLGTINERQEFDGDR 364
Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 277
WSE G+RYMLKLFRDY+ HQV +G+P +D+ HI + + D+
Sbjct: 365 QWSENGERYMLKLFRDYVFHQVDANGQPVVDLGHIAWTIMRADSA 409
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%)
Query: 332 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELN 391
+ +T+ + I ++ LD + D+L + L E+ENGRLFRLL +LGTINER E +
Sbjct: 302 ETKTIETFLSKISSQIMANLDMMLHQNDALTSNLYSEIENGRLFRLLCRLGTINERQEFD 361
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 439
D WSE G+RYMLKLFRDY+ HQV +G+P +D+ HI + + D+
Sbjct: 362 GDRQWSENGERYMLKLFRDYVFHQVDANGQPVVDLGHIAWTIMRADSA 409
>gi|223590121|sp|A5DCP8.2|PAN3_PICGU RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|190345130|gb|EDK36955.2| hypothetical protein PGUG_01053 [Meyerozyma guilliermondii ATCC
6260]
Length = 620
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 106 LPLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILY- 164
LP ++N Q+D+ + +L++ +T VQ + + ++ + A +++L
Sbjct: 414 LPTYMENLQ--QEDIRNMARLMVDLTTVMNPVVQNDIFKLKSSGLSTDFVAAVQDLSNTD 471
Query: 165 -LLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 223
L S +K + L+ ++ D ++ D LE++LS E+EN RL RL+ K+ I
Sbjct: 472 DLESYIRKHLAIRLLDVV--------DMLEDSNDYLESQLSTELENARLVRLMTKINFIV 523
Query: 224 ERPELNLDPT-----WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 278
+RPE + + T W+E G +Y+LKLFRD++ Q E G+P D+S ++ LNKLDAG
Sbjct: 524 DRPEWDNEATAAAAGWTENGPKYLLKLFRDFVFFQTDEMGKPVTDLSRVLVTLNKLDAGI 583
Query: 279 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
EK L+SRDE++ +VVSY E++ L+ F ++
Sbjct: 584 DEKFLLVSRDEKTCIVVSYKEIRDLLESVFRTIT 617
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 85/129 (65%), Gaps = 5/129 (3%)
Query: 351 LDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT-----WSETGDRYML 405
+D ++ D LE++LS E+EN RL RL+ K+ I +RPE + + T W+E G +Y+L
Sbjct: 489 VDMLEDSNDYLESQLSTELENARLVRLMTKINFIVDRPEWDNEATAAAAGWTENGPKYLL 548
Query: 406 KLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQC 465
KLFRD++ Q E G+P D+S ++ LNKLDAG EK L+SRDE++ +VVSY E++
Sbjct: 549 KLFRDFVFFQTDEMGKPVTDLSRVLVTLNKLDAGIDEKFLLVSRDEKTCIVVSYKEIRDL 608
Query: 466 LDQSFHELS 474
L+ F ++
Sbjct: 609 LESVFRTIT 617
>gi|448088351|ref|XP_004196525.1| Piso0_003747 [Millerozyma farinosa CBS 7064]
gi|448092490|ref|XP_004197556.1| Piso0_003747 [Millerozyma farinosa CBS 7064]
gi|359377947|emb|CCE84206.1| Piso0_003747 [Millerozyma farinosa CBS 7064]
gi|359378978|emb|CCE83175.1| Piso0_003747 [Millerozyma farinosa CBS 7064]
Length = 665
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 8/203 (3%)
Query: 117 QDDLTALGKLILAMTCRSL-MAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVV 175
Q D+ G++IL + +L + ++ + QT I + S + + +++S+ T
Sbjct: 464 QQDIVKFGEIILDLAALTLPVGLRSGDKQTVITNLQNSSTVQFSDE--FIVSLRALVTAT 521
Query: 176 -DLMPMIGARYYTQL----DAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
DL + +L + ++ D +E++LS E+EN RL RL KL I +RPE
Sbjct: 522 NDLHAFVKEHLSLKLLSFANNLEDSSDFMESQLSTELENARLVRLCAKLNFIIDRPEFEN 581
Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
DP W + G ++++KLFRDY+ Q E G P D+S ++ LNKLDA E+ L++RDE+
Sbjct: 582 DPEWQQNGPKHIIKLFRDYIFFQYDEFGNPVCDLSRVLTNLNKLDAAIDEQFLLVTRDER 641
Query: 291 SVLVVSYAELKQCLDQSFHELSS 313
+ ++VSY E++ +D F L+S
Sbjct: 642 NCIIVSYKEIRDIIDSVFRSLTS 664
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 77/117 (65%)
Query: 359 DSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQE 418
D +E++LS E+EN RL RL KL I +RPE DP W + G ++++KLFRDY+ Q E
Sbjct: 548 DFMESQLSTELENARLVRLCAKLNFIIDRPEFENDPEWQQNGPKHIIKLFRDYIFFQYDE 607
Query: 419 DGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSS 475
G P D+S ++ LNKLDA E+ L++RDE++ ++VSY E++ +D F L+S
Sbjct: 608 FGNPVCDLSRVLTNLNKLDAAIDEQFLLVTRDERNCIIVSYKEIRDIIDSVFRSLTS 664
>gi|146423497|ref|XP_001487676.1| hypothetical protein PGUG_01053 [Meyerozyma guilliermondii ATCC
6260]
Length = 620
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 121/214 (56%), Gaps = 17/214 (7%)
Query: 106 LPLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILY- 164
LP ++N Q+D+ + +L++ +T VQ + + ++ + A +++L
Sbjct: 414 LPTYMENLQ--QEDIRNMARLMVDLTTVMNPVVQNDIFKLKSSGLSTDFVAAVQDLSNTD 471
Query: 165 -LLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 223
L S +K + L+ ++ D ++ D LE++LS E+EN RL RL+ K+ I
Sbjct: 472 DLESYIRKHLAIRLLDVV--------DMLEDLNDYLESQLSTELENARLVRLMTKINFIV 523
Query: 224 ERPELNLDPT-----WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 278
+RPE + + T W+E G +Y+LKLFRD++ Q E G+P D+S ++ LNKLDAG
Sbjct: 524 DRPEWDNEATAAAAGWTENGPKYLLKLFRDFVFFQTDEMGKPVTDLSRVLVTLNKLDAGI 583
Query: 279 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
EK L+SRDE++ +VVSY E++ L+ F ++
Sbjct: 584 DEKFLLVSRDEKTCIVVSYKEIRDLLESVFRTIT 617
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 85/129 (65%), Gaps = 5/129 (3%)
Query: 351 LDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT-----WSETGDRYML 405
+D ++ D LE++LS E+EN RL RL+ K+ I +RPE + + T W+E G +Y+L
Sbjct: 489 VDMLEDLNDYLESQLSTELENARLVRLMTKINFIVDRPEWDNEATAAAAGWTENGPKYLL 548
Query: 406 KLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQC 465
KLFRD++ Q E G+P D+S ++ LNKLDAG EK L+SRDE++ +VVSY E++
Sbjct: 549 KLFRDFVFFQTDEMGKPVTDLSRVLVTLNKLDAGIDEKFLLVSRDEKTCIVVSYKEIRDL 608
Query: 466 LDQSFHELS 474
L+ F ++
Sbjct: 609 LESVFRTIT 617
>gi|213406457|ref|XP_002174000.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Schizosaccharomyces japonicus yFS275]
gi|212002047|gb|EEB07707.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Schizosaccharomyces japonicus yFS275]
Length = 572
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 110/193 (56%), Gaps = 6/193 (3%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS-VHQKRTVVD 176
DD+ + GK+++A+ ++ E+L T+ + ++YS D I++L+S H+ + + +
Sbjct: 378 DDIKSFGKMMVALCTGNV----DEDLTTAATNIRKNYSHDFWKAIIFLISETHENKDMTN 433
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
M +I + ++ E LS ME+ R+ R+L KL + E P ++P
Sbjct: 434 FMNLIAPQLMQIVNNSFAKTQKTEACLSGLMEHNRIVRILFKLIHVLENPNAAVNPRSLT 493
Query: 237 TGDRYML-KLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
R L +LFRD++ HQV E G P LD+ H++ CL+KL AG+ ++I L+SRDE+ +
Sbjct: 494 KEKRVQLSQLFRDFVFHQVDESGSPVLDLQHVLTCLSKLVAGSNKRIVLVSRDEREFTPI 553
Query: 296 SYAELKQCLDQSF 308
SY ELK C++ +F
Sbjct: 554 SYDELKTCIESAF 566
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 325 LYLLS-VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
++L+S H+ + + + M +I + ++ E LS ME+ R+ R+L KL
Sbjct: 419 IFLISETHENKDMTNFMNLIAPQLMQIVNNSFAKTQKTEACLSGLMEHNRIVRILFKLIH 478
Query: 384 INERPELNLDPTWSETGDRYML-KLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQE 442
+ E P ++P R L +LFRD++ HQV E G P LD+ H++ CL+KL AG+ +
Sbjct: 479 VLENPNAAVNPRSLTKEKRVQLSQLFRDFVFHQVDESGSPVLDLQHVLTCLSKLVAGSNK 538
Query: 443 KICLMSRDEQSVLVVSYAELKQCLDQSF 470
+I L+SRDE+ +SY ELK C++ +F
Sbjct: 539 RIVLVSRDEREFTPISYDELKTCIESAF 566
>gi|323447505|gb|EGB03423.1| hypothetical protein AURANDRAFT_72726 [Aureococcus anophagefferens]
Length = 580
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 106/200 (53%), Gaps = 8/200 (4%)
Query: 118 DDLTALGKLILAMTCRSL----MAVQRE--NLQTSIDLMARSYSADLRNLILYLLSVHQK 171
DD+ ALG ++LA+ R+L Q E Q + R YS ++ LI LL+ +
Sbjct: 360 DDVIALGHVMLALATRALSDGSCTPQNELARYQYAYYKGTRVYSREIYALISELLT--KP 417
Query: 172 RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLD 231
TV L M+ R + +LDA D E S E+ GRL R+++ + + E
Sbjct: 418 PTVFALCDMLSGRAFDELDATYQCVDCYEGLASAEVGAGRLLRVMLHVSSALYGSEKQAG 477
Query: 232 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQS 291
WSE+G+RY+L LF DY+ HQV G L+ H++ L KLDA EKI L+SRD ++
Sbjct: 478 SVWSESGERYLLLLFMDYVFHQVDGSGLSILNYGHVIASLVKLDASDPEKILLVSRDGRT 537
Query: 292 VLVVSYAELKQCLDQSFHEL 311
+L SY E++Q L Q + L
Sbjct: 538 ILASSYLEVRQALSQVYASL 557
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 77/139 (55%)
Query: 335 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 394
TV L M+ R + +LDA D E S E+ GRL R+++ + + E
Sbjct: 419 TVFALCDMLSGRAFDELDATYQCVDCYEGLASAEVGAGRLLRVMLHVSSALYGSEKQAGS 478
Query: 395 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 454
WSE+G+RY+L LF DY+ HQV G L+ H++ L KLDA EKI L+SRD +++
Sbjct: 479 VWSESGERYLLLLFMDYVFHQVDGSGLSILNYGHVIASLVKLDASDPEKILLVSRDGRTI 538
Query: 455 LVVSYAELKQCLDQSFHEL 473
L SY E++Q L Q + L
Sbjct: 539 LASSYLEVRQALSQVYASL 557
>gi|452825135|gb|EME32133.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 isoform 2
[Galdieria sulphuraria]
Length = 563
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 154 YSADLRNLILYLLSVHQKRT----VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMEN 209
YS D+ +++ +L+ H RT + + ++ + V LH D+LE EL + + +
Sbjct: 399 YSHDILHILSFLVD-HYNRTLPVSITQICSIVAPQIIYDYGHVWLHADTLEAELDRRLNS 457
Query: 210 GRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVH 269
RLF+L+ G + + + + WSET D+++L+LF DY+ H + + +LD+SH++
Sbjct: 458 SRLFQLISLFGFVLDWDDSSTISQWSETEDKFVLRLFYDYMFHPYDNENKCFLDISHVIE 517
Query: 270 CLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHE 310
CLN++D G++E + L S+D +S+LVVSYA+++ L ++ E
Sbjct: 518 CLNRVDVGSEELMLLASKDSKSLLVVSYADIRCSLVKALSE 558
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 325 LYLLSVHQKRT----VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L L H RT + + ++ + V LH D+LE EL + + + RLF+L+
Sbjct: 407 LSFLVDHYNRTLPVSITQICSIVAPQIIYDYGHVWLHADTLEAELDRRLNSSRLFQLISL 466
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
G + + + + WSET D+++L+LF DY+ H + + +LD+SH++ CLN++D G+
Sbjct: 467 FGFVLDWDDSSTISQWSETEDKFVLRLFYDYMFHPYDNENKCFLDISHVIECLNRVDVGS 526
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHE 472
+E + L S+D +S+LVVSYA+++ L ++ E
Sbjct: 527 EELMLLASKDSKSLLVVSYADIRCSLVKALSE 558
>gi|407850260|gb|EKG04712.1| hypothetical protein TCSYLVIO_004228 [Trypanosoma cruzi]
Length = 505
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 10/203 (4%)
Query: 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVV 175
++ D+ ALG ++ ++ R+L A + L + ++++ L L + +
Sbjct: 293 MKQDIQALGIMLFQLSTRNLAARVDDTLNQPMPGFSKTF------LTLVKACLEGAPDIR 346
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
DL +G R ++ + H D L + +KE+ NGRL RL+VKL + E LN P S
Sbjct: 347 DLCCALGERMSMEVAHQEGHADYLVTQCAKEIHNGRLMRLMVKLNFVLE--SLNDVPEHS 404
Query: 236 -ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE-QSVL 293
E +RY L+LF Y+ +QV E+ R LD H+ H LNKLD G++E + L+ D+ ++L
Sbjct: 405 TEAHNRYALRLFSQYVFNQVDENHRIRLDWGHVFHSLNKLDCGSEELVQLIGNDDGNTIL 464
Query: 294 VVSYAELKQCLDQSFHELSSSAS 316
V+SY +L+ L+ +F +L SAS
Sbjct: 465 VISYHDLRASLESAFEQLQLSAS 487
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 395
+ DL +G R ++ + H D L + +KE+ NGRL RL+VKL + E LN P
Sbjct: 345 IRDLCCALGERMSMEVAHQEGHADYLVTQCAKEIHNGRLMRLMVKLNFVLE--SLNDVPE 402
Query: 396 WS-ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE-QS 453
S E +RY L+LF Y+ +QV E+ R LD H+ H LNKLD G++E + L+ D+ +
Sbjct: 403 HSTEAHNRYALRLFSQYVFNQVDENHRIRLDWGHVFHSLNKLDCGSEELVQLIGNDDGNT 462
Query: 454 VLVVSYAELKQCLDQSFHELSSSAS 478
+LV+SY +L+ L+ +F +L SAS
Sbjct: 463 ILVISYHDLRASLESAFEQLQLSAS 487
>gi|344229522|gb|EGV61407.1| hypothetical protein CANTEDRAFT_114886 [Candida tenuis ATCC 10573]
Length = 632
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 181 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDR 240
+ R ++ +Q D +E++L+ E+EN RLFRL+ K+ I + P L W E
Sbjct: 504 LSKRSIKMINDLQKSQDYIESQLTNEVENARLFRLISKINFIVDSPHL----LWKENEKV 559
Query: 241 YMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAEL 300
++KLF DY+ HQ E RP +D+S ++ LNKLD G +E+ L+SRDE+ ++VSY EL
Sbjct: 560 NLIKLFNDYIFHQHDESNRPIIDLSRVLIKLNKLDCGIEERFMLVSRDEKLSILVSYKEL 619
Query: 301 KQCLDQSFHELS 312
+ +D F EL+
Sbjct: 620 RDIIDSCFRELA 631
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDR 402
+ R ++ +Q D +E++L+ E+EN RLFRL+ K+ I + P L W E
Sbjct: 504 LSKRSIKMINDLQKSQDYIESQLTNEVENARLFRLISKINFIVDSPHL----LWKENEKV 559
Query: 403 YMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAEL 462
++KLF DY+ HQ E RP +D+S ++ LNKLD G +E+ L+SRDE+ ++VSY EL
Sbjct: 560 NLIKLFNDYIFHQHDESNRPIIDLSRVLIKLNKLDCGIEERFMLVSRDEKLSILVSYKEL 619
Query: 463 KQCLDQSFHELS 474
+ +D F EL+
Sbjct: 620 RDIIDSCFRELA 631
>gi|71405399|ref|XP_805322.1| hypothetical protein Tc00.1047053504643.49 [Trypanosoma cruzi
strain CL Brener]
gi|70868684|gb|EAN83471.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 503
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 113/206 (54%), Gaps = 16/206 (7%)
Query: 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVV 175
++ D+ ALG ++ ++ R+L A + L + ++++ L + +
Sbjct: 293 MKQDIQALGIMLFQLSTRNLAARVDDTLNQPMPGFSKTF------WTLVKACLEGAPDIR 346
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG----TINERPELNLD 231
DL +G R ++ + H D L + +KE+ NGRL RL+VKL ++N+ PE +
Sbjct: 347 DLCCALGERMSMEVAHQEGHADYLVTQCAKEIHNGRLMRLMVKLNFVLESLNDVPEHS-- 404
Query: 232 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE-Q 290
+E +RY L+LF Y+ +QV E+ R LD H+ H LNKLD G++E + L+ D+
Sbjct: 405 ---TEAHNRYALRLFSQYVFNQVDENHRIRLDWGHVFHSLNKLDCGSEELVQLIGNDDGN 461
Query: 291 SVLVVSYAELKQCLDQSFHELSSSAS 316
++LV+SY +L+ L+ +F +L SAS
Sbjct: 462 TILVISYHDLRASLESAFEQLQLSAS 487
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG----TINERPELN 391
+ DL +G R ++ + H D L + +KE+ NGRL RL+VKL ++N+ PE +
Sbjct: 345 IRDLCCALGERMSMEVAHQEGHADYLVTQCAKEIHNGRLMRLMVKLNFVLESLNDVPEHS 404
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
+E +RY L+LF Y+ +QV E+ R LD H+ H LNKLD G++E + L+ D+
Sbjct: 405 -----TEAHNRYALRLFSQYVFNQVDENHRIRLDWGHVFHSLNKLDCGSEELVQLIGNDD 459
Query: 452 -QSVLVVSYAELKQCLDQSFHELSSSAS 478
++LV+SY +L+ L+ +F +L SAS
Sbjct: 460 GNTILVISYHDLRASLESAFEQLQLSAS 487
>gi|344229521|gb|EGV61406.1| hypothetical protein CANTEDRAFT_114886 [Candida tenuis ATCC 10573]
Length = 455
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 181 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDR 240
+ R ++ +Q D +E++L+ E+EN RLFRL+ K+ I + P L W E
Sbjct: 327 LSKRSIKMINDLQKSQDYIESQLTNEVENARLFRLISKINFIVDSPHL----LWKENEKV 382
Query: 241 YMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAEL 300
++KLF DY+ HQ E RP +D+S ++ LNKLD G +E+ L+SRDE+ ++VSY EL
Sbjct: 383 NLIKLFNDYIFHQHDESNRPIIDLSRVLIKLNKLDCGIEERFMLVSRDEKLSILVSYKEL 442
Query: 301 KQCLDQSFHELS 312
+ +D F EL+
Sbjct: 443 RDIIDSCFRELA 454
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDR 402
+ R ++ +Q D +E++L+ E+EN RLFRL+ K+ I + P L W E
Sbjct: 327 LSKRSIKMINDLQKSQDYIESQLTNEVENARLFRLISKINFIVDSPHL----LWKENEKV 382
Query: 403 YMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAEL 462
++KLF DY+ HQ E RP +D+S ++ LNKLD G +E+ L+SRDE+ ++VSY EL
Sbjct: 383 NLIKLFNDYIFHQHDESNRPIIDLSRVLIKLNKLDCGIEERFMLVSRDEKLSILVSYKEL 442
Query: 463 KQCLDQSFHELS 474
+ +D F EL+
Sbjct: 443 RDIIDSCFRELA 454
>gi|260946958|ref|XP_002617776.1| hypothetical protein CLUG_01235 [Clavispora lusitaniae ATCC 42720]
gi|238847648|gb|EEQ37112.1| hypothetical protein CLUG_01235 [Clavispora lusitaniae ATCC 42720]
Length = 665
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 119 DLTALGKLILAMTCRSLMAVQRE-NLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDL 177
D+ GK+IL + +L A R +++ ID ++RS S L L V
Sbjct: 469 DVIRFGKIILDLAATTLPAGLRNGSIEEMIDNLSRSSSISFSGEFLETLRVLNSAESEFS 528
Query: 178 MPMIGARYYTQ-----LDAVQLHGDSLENELSKEMENGRLFRLLVK----LGTINERPEL 228
+ RY +Q ++ +Q D E +LS E+EN RLFRL+ K L ++ E+
Sbjct: 529 LINFYTRYLSQRALKLINGLQDSTDYYEGQLSSELENARLFRLMTKIDYLLSQSDKEDEV 588
Query: 229 NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD 288
N G+ +++KLFRD++ E G+P +D+S ++ LNKLD G EKI L+SR+
Sbjct: 589 N--------GNLFVIKLFRDFVFQTTDETGKPKVDLSRVLVNLNKLDVGVDEKILLVSRE 640
Query: 289 EQSVLVVSYAELKQCLDQSFHEL 311
E S L+VSY E+K +DQ+F +
Sbjct: 641 EDSCLMVSYKEIKDIMDQTFRNI 663
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 82/137 (59%), Gaps = 17/137 (12%)
Query: 346 RYYTQ-----LDAVQLHGDSLENELSKEMENGRLFRLLVK----LGTINERPELNLDPTW 396
RY +Q ++ +Q D E +LS E+EN RLFRL+ K L ++ E+N
Sbjct: 535 RYLSQRALKLINGLQDSTDYYEGQLSSELENARLFRLMTKIDYLLSQSDKEDEVN----- 589
Query: 397 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 456
G+ +++KLFRD++ E G+P +D+S ++ LNKLD G EKI L+SR+E S L+
Sbjct: 590 ---GNLFVIKLFRDFVFQTTDETGKPKVDLSRVLVNLNKLDVGVDEKILLVSREEDSCLM 646
Query: 457 VSYAELKQCLDQSFHEL 473
VSY E+K +DQ+F +
Sbjct: 647 VSYKEIKDIMDQTFRNI 663
>gi|154342985|ref|XP_001567438.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064770|emb|CAM42876.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 481
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 105/205 (51%), Gaps = 10/205 (4%)
Query: 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVV 175
++ D+ ALG ++ + R+L V+ E L +S LI L H
Sbjct: 270 MKQDIQALGFILFQLASRNL-NVKLETFTNKQPLPG--FSQSFWELIKTCLEGHADS--A 324
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP-ELNLDPTW 234
L +G R ++ + H D L ++ KEM NGR+ RLL+KL E P E++ +
Sbjct: 325 QLCHALGERMSMEVGHQEGHTDFLMSQCQKEMHNGRVMRLLIKLSFALESPAEVH---EY 381
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD-EQSVL 293
+ RY+L+LF +L +QV E R +D H+ HCLNKLD G+ E I L+ D +VL
Sbjct: 382 TSENQRYVLRLFNQFLFNQVDEQNRVNVDWGHVYHCLNKLDIGSDETIQLIGTDTSNTVL 441
Query: 294 VVSYAELKQCLDQSFHELSSSASLT 318
VVSYA+L+ LD F + A +T
Sbjct: 442 VVSYADLRAMLDSVFDRVQQVAQMT 466
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP-ELNLDPTWSETGD 401
+G R ++ + H D L ++ KEM NGR+ RLL+KL E P E++ ++
Sbjct: 330 LGERMSMEVGHQEGHTDFLMSQCQKEMHNGRVMRLLIKLSFALESPAEVH---EYTSENQ 386
Query: 402 RYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD-EQSVLVVSYA 460
RY+L+LF +L +QV E R +D H+ HCLNKLD G+ E I L+ D +VLVVSYA
Sbjct: 387 RYVLRLFNQFLFNQVDEQNRVNVDWGHVYHCLNKLDIGSDETIQLIGTDTSNTVLVVSYA 446
Query: 461 ELKQCLDQSFHELSSSASLT 480
+L+ LD F + A +T
Sbjct: 447 DLRAMLDSVFDRVQQVAQMT 466
>gi|157873770|ref|XP_001685388.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68128460|emb|CAJ08574.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 481
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 105/205 (51%), Gaps = 10/205 (4%)
Query: 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVV 175
++ D+ ALG ++ + R+L V+ E L +S LI L H
Sbjct: 270 MKQDIQALGFILFQLASRNL-NVKLETFTNKQPLPG--FSQSFWELIKTCLEGHADS--A 324
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP-ELNLDPTW 234
L +G R ++ + H D L ++ KEM NGR+ RLL+KL E P E++ +
Sbjct: 325 QLCHALGERMSMEVGHQEGHTDFLMSQCQKEMHNGRVMRLLIKLSFALESPAEVH---EY 381
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD-EQSVL 293
+ RY+L+LF +L +QV E R +D H+ HCLNKLD G+ E I L+ D +VL
Sbjct: 382 TSENQRYVLRLFNQFLFNQVDEQNRVNVDWGHVYHCLNKLDIGSDETIQLIGTDTSNTVL 441
Query: 294 VVSYAELKQCLDQSFHELSSSASLT 318
VVSYA+L+ LD F + + +T
Sbjct: 442 VVSYADLRAMLDSVFDRVQQVSQMT 466
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP-ELNLDPTWSETGD 401
+G R ++ + H D L ++ KEM NGR+ RLL+KL E P E++ ++
Sbjct: 330 LGERMSMEVGHQEGHTDFLMSQCQKEMHNGRVMRLLIKLSFALESPAEVH---EYTSENQ 386
Query: 402 RYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD-EQSVLVVSYA 460
RY+L+LF +L +QV E R +D H+ HCLNKLD G+ E I L+ D +VLVVSYA
Sbjct: 387 RYVLRLFNQFLFNQVDEQNRVNVDWGHVYHCLNKLDIGSDETIQLIGTDTSNTVLVVSYA 446
Query: 461 ELKQCLDQSFHELSSSASLT 480
+L+ LD F + + +T
Sbjct: 447 DLRAMLDSVFDRVQQVSQMT 466
>gi|407410886|gb|EKF33163.1| hypothetical protein MOQ_002974 [Trypanosoma cruzi marinkellei]
Length = 505
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 114/206 (55%), Gaps = 16/206 (7%)
Query: 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVV 175
++ D+ ALG ++L ++ R+L A + L + ++++ L + +
Sbjct: 293 MKQDIQALGIMLLQLSTRNLAARLDDILNQPLPGFSKTF------WTLVKACLEGAPDIR 346
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG----TINERPELNLD 231
DL +G R ++ + H D L + +KE+ NGRL RL+VKL ++++ PE +
Sbjct: 347 DLCCALGERMSMEVAHQEGHADYLVTQCAKEIHNGRLMRLMVKLNFVLESLHDVPEHS-- 404
Query: 232 PTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE-Q 290
+E +RY L+LF Y+ +QV E+ R LD H+ H LNKLD G++E + L+ D+
Sbjct: 405 ---TEAHNRYALRLFSQYVFNQVDENHRVRLDWGHVFHSLNKLDCGSEELVQLIGNDDGN 461
Query: 291 SVLVVSYAELKQCLDQSFHELSSSAS 316
++LV+SY +L+ L+ +F +L SAS
Sbjct: 462 TILVISYHDLRASLESAFEQLQLSAS 487
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG----TINERPELN 391
+ DL +G R ++ + H D L + +KE+ NGRL RL+VKL ++++ PE +
Sbjct: 345 IRDLCCALGERMSMEVAHQEGHADYLVTQCAKEIHNGRLMRLMVKLNFVLESLHDVPEHS 404
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
+E +RY L+LF Y+ +QV E+ R LD H+ H LNKLD G++E + L+ D+
Sbjct: 405 -----TEAHNRYALRLFSQYVFNQVDENHRVRLDWGHVFHSLNKLDCGSEELVQLIGNDD 459
Query: 452 -QSVLVVSYAELKQCLDQSFHELSSSAS 478
++LV+SY +L+ L+ +F +L SAS
Sbjct: 460 GNTILVISYHDLRASLESAFEQLQLSAS 487
>gi|146096288|ref|XP_001467758.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134072124|emb|CAM70823.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 481
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 105/205 (51%), Gaps = 10/205 (4%)
Query: 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVV 175
++ D+ ALG ++ + R+L V+ E L +S LI L H
Sbjct: 270 MKQDIQALGFILFQLASRNL-NVKLETFTNKQPLPG--FSQSFWELIKTCLEGHADS--A 324
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP-ELNLDPTW 234
L +G R ++ + H D L ++ KEM NGR+ RLL+KL E P E++ +
Sbjct: 325 QLCHALGERMSMEVGHQEGHTDFLMSQCQKEMHNGRVMRLLIKLSFALESPAEVH---EY 381
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD-EQSVL 293
+ RY+L+LF +L +QV E R +D H+ HCLNKLD G+ E I L+ D +VL
Sbjct: 382 TSENQRYVLRLFNQFLFNQVDEQNRVNVDWGHVYHCLNKLDIGSDETIQLIGTDTSNTVL 441
Query: 294 VVSYAELKQCLDQSFHELSSSASLT 318
VVSYA+L+ LD F + + +T
Sbjct: 442 VVSYADLRAMLDSVFDRVQQVSQMT 466
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP-ELNLDPTWSETGD 401
+G R ++ + H D L ++ KEM NGR+ RLL+KL E P E++ ++
Sbjct: 330 LGERMSMEVGHQEGHTDFLMSQCQKEMHNGRVMRLLIKLSFALESPAEVH---EYTSENQ 386
Query: 402 RYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD-EQSVLVVSYA 460
RY+L+LF +L +QV E R +D H+ HCLNKLD G+ E I L+ D +VLVVSYA
Sbjct: 387 RYVLRLFNQFLFNQVDEQNRVNVDWGHVYHCLNKLDIGSDETIQLIGTDTSNTVLVVSYA 446
Query: 461 ELKQCLDQSFHELSSSASLT 480
+L+ LD F + + +T
Sbjct: 447 DLRAMLDSVFDRVQQVSQMT 466
>gi|398020662|ref|XP_003863494.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501727|emb|CBZ36808.1| hypothetical protein, conserved [Leishmania donovani]
Length = 481
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 105/205 (51%), Gaps = 10/205 (4%)
Query: 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVV 175
++ D+ ALG ++ + R+L A + E L +S LI L H
Sbjct: 270 MKQDIQALGFILFQLASRNLNA-KLETFTNKQPLPG--FSQSFWELIKTCLEGHADS--A 324
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP-ELNLDPTW 234
L +G R ++ + H D L ++ KEM NGR+ RLL+KL E P E++ +
Sbjct: 325 QLCHALGERMSMEVGHQEGHTDFLMSQCQKEMHNGRVMRLLIKLSFALESPAEVH---EY 381
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD-EQSVL 293
+ RY+L+LF +L +QV E R +D H+ HCLNKLD G+ E I L+ D +VL
Sbjct: 382 TSENQRYVLRLFNQFLFNQVDEQNRVNVDWGHVYHCLNKLDIGSDETIQLIGTDTSNTVL 441
Query: 294 VVSYAELKQCLDQSFHELSSSASLT 318
VVSYA+L+ LD F + + +T
Sbjct: 442 VVSYADLRAMLDSVFDRVQQVSQMT 466
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP-ELNLDPTWSETGD 401
+G R ++ + H D L ++ KEM NGR+ RLL+KL E P E++ ++
Sbjct: 330 LGERMSMEVGHQEGHTDFLMSQCQKEMHNGRVMRLLIKLSFALESPAEVH---EYTSENQ 386
Query: 402 RYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD-EQSVLVVSYA 460
RY+L+LF +L +QV E R +D H+ HCLNKLD G+ E I L+ D +VLVVSYA
Sbjct: 387 RYVLRLFNQFLFNQVDEQNRVNVDWGHVYHCLNKLDIGSDETIQLIGTDTSNTVLVVSYA 446
Query: 461 ELKQCLDQSFHELSSSASLT 480
+L+ LD F + + +T
Sbjct: 447 DLRAMLDSVFDRVQQVSQMT 466
>gi|401426863|ref|XP_003877915.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494162|emb|CBZ29459.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 481
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 10/205 (4%)
Query: 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVV 175
++ D+ ALG ++ + R+L V+ E L +S LI L H
Sbjct: 270 MKQDIQALGFILFQLASRNL-NVKLETFTNKQPLPG--FSQSFWELIKTCLEGHADS--A 324
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP-ELNLDPTW 234
L +G R ++ + H D L ++ KEM NGR+ RLL+KL E P E++ +
Sbjct: 325 QLCHALGERMSMEVGHQEGHTDFLMSQCQKEMHNGRVMRLLIKLSFALESPAEVH---EY 381
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD-EQSVL 293
+ RY+L+LF +L +QV E R +D H+ HCLNKLD G E I L+ D +VL
Sbjct: 382 TSENQRYVLRLFNQFLFNQVDEQNRVNVDWGHVYHCLNKLDIGADETIQLIGTDTSNTVL 441
Query: 294 VVSYAELKQCLDQSFHELSSSASLT 318
VVSYA+L+ LD F + + +T
Sbjct: 442 VVSYADLRAMLDSVFDRVQQVSQMT 466
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 80/140 (57%), Gaps = 5/140 (3%)
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP-ELNLDPTWSETGD 401
+G R ++ + H D L ++ KEM NGR+ RLL+KL E P E++ ++
Sbjct: 330 LGERMSMEVGHQEGHTDFLMSQCQKEMHNGRVMRLLIKLSFALESPAEVH---EYTSENQ 386
Query: 402 RYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD-EQSVLVVSYA 460
RY+L+LF +L +QV E R +D H+ HCLNKLD G E I L+ D +VLVVSYA
Sbjct: 387 RYVLRLFNQFLFNQVDEQNRVNVDWGHVYHCLNKLDIGADETIQLIGTDTSNTVLVVSYA 446
Query: 461 ELKQCLDQSFHELSSSASLT 480
+L+ LD F + + +T
Sbjct: 447 DLRAMLDSVFDRVQQVSQMT 466
>gi|313239803|emb|CBY14673.1| unnamed protein product [Oikopleura dioica]
Length = 142
Score = 99.0 bits (245), Expect = 5e-18, Method: Composition-based stats.
Identities = 48/130 (36%), Positives = 83/130 (63%), Gaps = 6/130 (4%)
Query: 206 EMENGRLFRLLVKLGTINERPE----LNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPW 261
E+ENGRLFRL+ K+ + +P L + +WSE+G+R +++LFR+YL Q + G P+
Sbjct: 1 ELENGRLFRLISKMSMVQCQPPAGAVLGQEQSWSESGERRLVRLFRNYLFRQRTDQGNPF 60
Query: 262 LDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKS 321
L +SH++ LNKLD G+ EKI L S D+++V++ +Y ++K +++ L + + +P S
Sbjct: 61 LSISHVISSLNKLDVGSDEKIILNSNDDRTVILATYNDIKSAINKPLACLFN--NFSPWS 118
Query: 322 TLPLYLLSVH 331
P ++H
Sbjct: 119 AKPETASNIH 128
Score = 98.2 bits (243), Expect = 9e-18, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Query: 368 EMENGRLFRLLVKLGTINERPE----LNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPW 423
E+ENGRLFRL+ K+ + +P L + +WSE+G+R +++LFR+YL Q + G P+
Sbjct: 1 ELENGRLFRLISKMSMVQCQPPAGAVLGQEQSWSESGERRLVRLFRNYLFRQRTDQGNPF 60
Query: 424 LDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQ 468
L +SH++ LNKLD G+ EKI L S D+++V++ +Y ++K +++
Sbjct: 61 LSISHVISSLNKLDVGSDEKIILNSNDDRTVILATYNDIKSAINK 105
>gi|449016702|dbj|BAM80104.1| similar to PABP1-dependent poly A-specific ribonuclease subunit
PAN3 [Cyanidioschyzon merolae strain 10D]
Length = 542
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 7/172 (4%)
Query: 142 NLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLEN 201
+L +I+ + YSAD+ + L + Q + ++ R ++ + HGD+LE
Sbjct: 369 SLGAAIETIRALYSADVEKFLQMLANPAQISSDA-WNQILVTRVWSPYEHALNHGDALET 427
Query: 202 ELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPW 261
+++ +G LF + KL + ER ++ DP WSE GDRY+LKLFRD + H
Sbjct: 428 IAQEQLTDGDLFVVASKLAAVTERADVVGDPQWSEVGDRYLLKLFRDRVFHGTD------ 481
Query: 262 LDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSS 313
LD+ I L +L+A T+E + L SRD +S L+V+YAEL + L+ + +L+
Sbjct: 482 LDLERIRDELRRLNARTEEHMLLHSRDGRSRLIVTYAELARFLETALQDLAG 533
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 6/119 (5%)
Query: 357 HGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQV 416
HGD+LE +++ +G LF + KL + ER ++ DP WSE GDRY+LKLFRD + H
Sbjct: 421 HGDALETIAQEQLTDGDLFVVASKLAAVTERADVVGDPQWSEVGDRYLLKLFRDRVFHGT 480
Query: 417 QEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSS 475
LD+ I L +L+A T+E + L SRD +S L+V+YAEL + L+ + +L+
Sbjct: 481 D------LDLERIRDELRRLNARTEEHMLLHSRDGRSRLIVTYAELARFLETALQDLAG 533
>gi|384501426|gb|EIE91917.1| hypothetical protein RO3G_16628 [Rhizopus delemar RA 99-880]
Length = 458
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 74/157 (47%), Gaps = 55/157 (35%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
Q+DL GKL++++ C SL ++ NL S + + R YS+DL+N ILYLL +R
Sbjct: 357 QEDLLNFGKLLISLACNSLQSIL--NLSQSFEYITRFYSSDLKNTILYLLRFINER---- 410
Query: 177 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSE 236
PE + DP WSE
Sbjct: 411 -------------------------------------------------PEFSEDPRWSE 421
Query: 237 TGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNK 273
TGDRY++KLFR++L HQV E G P +DM H++ CLNK
Sbjct: 422 TGDRYIIKLFREFLFHQVNEVGIPVVDMGHVISCLNK 458
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 377 LLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNK 435
+L L INERPE + DP WSETGDRY++KLFR++L HQV E G P +DM H++ CLNK
Sbjct: 400 ILYLLRFINERPEFSEDPRWSETGDRYIIKLFREFLFHQVNEVGIPVVDMGHVISCLNK 458
>gi|340059608|emb|CCC53998.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 559
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 13/156 (8%)
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINER----PELN 229
+V+L +G R ++ + + D L ++ ++E NGRL RL++KL + E P+L+
Sbjct: 399 MVNLCRALGERMSMEVAHQEGYADYLISQCTREAHNGRLMRLMIKLNFVLESLHSVPDLS 458
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
SE +RY L+LF Y+ +QV E RP LD H+ H LNKLD G++E + L+ D+
Sbjct: 459 -----SEAHNRYALRLFSQYVFNQVDERDRPRLDWGHVFHSLNKLDCGSEELVQLIGNDD 513
Query: 290 QS-VLVVSYAELKQCLDQSFHELSSS---ASLTPKS 321
S +LV+SY +L+ L+ +F +L S A L P S
Sbjct: 514 NSTILVISYHDLRTILENAFEQLQLSVNDADLQPFS 549
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 13/156 (8%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINER----PELN 391
+V+L +G R ++ + + D L ++ ++E NGRL RL++KL + E P+L+
Sbjct: 399 MVNLCRALGERMSMEVAHQEGYADYLISQCTREAHNGRLMRLMIKLNFVLESLHSVPDLS 458
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
SE +RY L+LF Y+ +QV E RP LD H+ H LNKLD G++E + L+ D+
Sbjct: 459 -----SEAHNRYALRLFSQYVFNQVDERDRPRLDWGHVFHSLNKLDCGSEELVQLIGNDD 513
Query: 452 QS-VLVVSYAELKQCLDQSFHELSSS---ASLTPKS 483
S +LV+SY +L+ L+ +F +L S A L P S
Sbjct: 514 NSTILVISYHDLRTILENAFEQLQLSVNDADLQPFS 549
>gi|261335447|emb|CBH18441.1| PAN3 [Trypanosoma brucei gambiense DAL972]
Length = 512
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 85/143 (59%), Gaps = 10/143 (6%)
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG----TINERPELN 229
VV L +G R ++ + H D L ++ KE NGR+ RL++KL ++++ PE +
Sbjct: 352 VVTLCRALGERMSMEVAHQEGHADRLISQCGKEAHNGRIMRLMIKLNFVLESLHDFPEHS 411
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
+E +RY L+LF Y+ +QV E R LD H+ H LNKLD G++E + L+ DE
Sbjct: 412 -----AEANNRYALRLFSQYVFNQVDERHRTRLDWGHVFHSLNKLDCGSEELVQLIGNDE 466
Query: 290 -QSVLVVSYAELKQCLDQSFHEL 311
++LV+SY +L+ L+++F +L
Sbjct: 467 SNTILVISYRDLRDTLERAFEQL 489
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 85/143 (59%), Gaps = 10/143 (6%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG----TINERPELN 391
VV L +G R ++ + H D L ++ KE NGR+ RL++KL ++++ PE +
Sbjct: 352 VVTLCRALGERMSMEVAHQEGHADRLISQCGKEAHNGRIMRLMIKLNFVLESLHDFPEHS 411
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
+E +RY L+LF Y+ +QV E R LD H+ H LNKLD G++E + L+ DE
Sbjct: 412 -----AEANNRYALRLFSQYVFNQVDERHRTRLDWGHVFHSLNKLDCGSEELVQLIGNDE 466
Query: 452 -QSVLVVSYAELKQCLDQSFHEL 473
++LV+SY +L+ L+++F +L
Sbjct: 467 SNTILVISYRDLRDTLERAFEQL 489
>gi|74025774|ref|XP_829453.1| Pab1p-dependent poly(A) ribonuclease subunit [Trypanosoma brucei]
gi|70834839|gb|EAN80341.1| Pab1p-dependent poly(A) ribonuclease subunit, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 512
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 85/143 (59%), Gaps = 10/143 (6%)
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG----TINERPELN 229
VV L +G R ++ + H D L ++ KE NGR+ RL++KL ++++ PE +
Sbjct: 352 VVTLCRALGERMSMEVAHQEGHADRLISQCGKEAHNGRIMRLMIKLNFVLESLHDFPEHS 411
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
+E +RY L+LF Y+ +QV E R LD H+ H LNKLD G++E + L+ DE
Sbjct: 412 -----AEANNRYALRLFSQYVFNQVDERHRTRLDWGHVFHSLNKLDCGSEELVQLIGNDE 466
Query: 290 -QSVLVVSYAELKQCLDQSFHEL 311
++LV+SY +L+ L+++F +L
Sbjct: 467 SNTILVISYRDLRDTLERAFEQL 489
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 85/143 (59%), Gaps = 10/143 (6%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG----TINERPELN 391
VV L +G R ++ + H D L ++ KE NGR+ RL++KL ++++ PE +
Sbjct: 352 VVTLCRALGERMSMEVAHQEGHADRLISQCGKEAHNGRIMRLMIKLNFVLESLHDFPEHS 411
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
+E +RY L+LF Y+ +QV E R LD H+ H LNKLD G++E + L+ DE
Sbjct: 412 -----AEANNRYALRLFSQYVFNQVDERHRTRLDWGHVFHSLNKLDCGSEELVQLIGNDE 466
Query: 452 -QSVLVVSYAELKQCLDQSFHEL 473
++LV+SY +L+ L+++F +L
Sbjct: 467 SNTILVISYRDLRDTLERAFEQL 489
>gi|342186432|emb|CCC95918.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 505
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 10/147 (6%)
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG----TINERPELN 229
VV L +G R ++ + + D L ++ +KE+ NGR+ RL++KL +++E PE
Sbjct: 345 VVYLCHALGERMSMEVAHQEGNADYLVSQCAKEVHNGRIMRLMIKLNFVMESLHEIPE-- 402
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
SE RY L+LF Y+ +QV E R LD H+ H LNKLD G++E + L+ DE
Sbjct: 403 ---NSSEAHSRYALRLFSQYVFNQVDERHRARLDWGHVFHSLNKLDCGSEELVQLIGNDE 459
Query: 290 -QSVLVVSYAELKQCLDQSFHELSSSA 315
++LV+SY +L+ L+ +F +L SA
Sbjct: 460 SNTILVISYHDLRTTLETTFEQLQLSA 486
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 10/147 (6%)
Query: 336 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG----TINERPELN 391
VV L +G R ++ + + D L ++ +KE+ NGR+ RL++KL +++E PE
Sbjct: 345 VVYLCHALGERMSMEVAHQEGNADYLVSQCAKEVHNGRIMRLMIKLNFVMESLHEIPE-- 402
Query: 392 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
SE RY L+LF Y+ +QV E R LD H+ H LNKLD G++E + L+ DE
Sbjct: 403 ---NSSEAHSRYALRLFSQYVFNQVDERHRARLDWGHVFHSLNKLDCGSEELVQLIGNDE 459
Query: 452 -QSVLVVSYAELKQCLDQSFHELSSSA 477
++LV+SY +L+ L+ +F +L SA
Sbjct: 460 SNTILVISYHDLRTTLETTFEQLQLSA 486
>gi|56755703|gb|AAW26030.1| SJCHGC02522 protein [Schistosoma japonicum]
Length = 108
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 55/70 (78%)
Query: 242 MLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELK 301
MLKLFRD++ HQ G P+LD++HIV LNK++A + E++CL+SRD Q+V++V+YA++K
Sbjct: 1 MLKLFRDFVFHQSDPLGAPYLDLTHIVTTLNKVEAASPERLCLVSRDSQNVIIVTYADIK 60
Query: 302 QCLDQSFHEL 311
Q LD SF L
Sbjct: 61 QWLDSSFSYL 70
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 55/70 (78%)
Query: 404 MLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELK 463
MLKLFRD++ HQ G P+LD++HIV LNK++A + E++CL+SRD Q+V++V+YA++K
Sbjct: 1 MLKLFRDFVFHQSDPLGAPYLDLTHIVTTLNKVEAASPERLCLVSRDSQNVIIVTYADIK 60
Query: 464 QCLDQSFHEL 473
Q LD SF L
Sbjct: 61 QWLDSSFSYL 70
>gi|422294289|gb|EKU21589.1| PAB-dependent poly(A)-specific ribonuclease subunit 3
[Nannochloropsis gaditana CCMP526]
Length = 625
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 4/132 (3%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDL 177
+DL LG+LIL + R+L Q +L ++ + + YS +L L L L S +V +L
Sbjct: 493 EDLAMLGRLILTLATRTLPTPQ--SLGAALAQVRQQYSPELHALSLQLCSKPGLLSVFEL 550
Query: 178 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL--NLDPTWS 235
+P++ +LD D LE LS E E+GRLFRL +KL + R E DP W+
Sbjct: 551 VPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWN 610
Query: 236 ETGDRYMLKLFR 247
ETG RY+LKLF+
Sbjct: 611 ETGTRYILKLFK 622
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 293 LVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLD 352
L + A+++Q H LS L L S +V +L+P++ +LD
Sbjct: 516 LGAALAQVRQQYSPELHALS------------LQLCSKPGLLSVFELVPLLSRYALDELD 563
Query: 353 AVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL--NLDPTWSETGDRYMLKLFR 409
D LE LS E E+GRLFRL +KL + R E DP W+ETG RY+LKLF+
Sbjct: 564 RQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFK 622
>gi|344300822|gb|EGW31143.1| hypothetical protein SPAPADRAFT_63057 [Spathaspora passalidarum
NRRL Y-27907]
Length = 495
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 104/206 (50%), Gaps = 19/206 (9%)
Query: 111 DNYHDLQDDLTALGKLILAMTCRSL-MAVQRENLQTSIDLMARSYSADLRNLILYLLSVH 169
D D DD+ +GK++L ++ +L + ++ N+ + + S +L I L+
Sbjct: 303 DEDQDPLDDIHNIGKVLLELSTLTLPINMRSGNIYQT---LKSRISEELIESIRELVDAD 359
Query: 170 QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI---NERP 226
Q + + ++ + ++ +Q D +E +L+ E+EN RLFRL+ K+ + P
Sbjct: 360 QTFELTAFQSKLSSQTFNVINKLQHANDFMEAQLTSELENARLFRLMTKINYVMSSTNSP 419
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
EL + +KLF D++ + E G+ +D+S ++ LNKLD G EK+ L+S
Sbjct: 420 ELKI------------IKLFHDHVFNCYDERGKRVVDLSKVLVNLNKLDCGIDEKVLLVS 467
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELS 312
D+ ++ S+ E++ +D F +S
Sbjct: 468 NDDNECIIASFKEIRDIIDSQFRVIS 493
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 15/151 (9%)
Query: 327 LLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI-- 384
L+ Q + + ++ + ++ +Q D +E +L+ E+EN RLFRL+ K+ +
Sbjct: 355 LVDADQTFELTAFQSKLSSQTFNVINKLQHANDFMEAQLTSELENARLFRLMTKINYVMS 414
Query: 385 -NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
PEL + +KLF D++ + E G+ +D+S ++ LNKLD G EK
Sbjct: 415 STNSPELKI------------IKLFHDHVFNCYDERGKRVVDLSKVLVNLNKLDCGIDEK 462
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L+S D+ ++ S+ E++ +D F +S
Sbjct: 463 VLLVSNDDNECIIASFKEIRDIIDSQFRVIS 493
>gi|429242978|ref|NP_594234.2| poly(A)-specific ribonuclease complex subunit Pan3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|380865406|sp|O13865.2|PAN3L_SCHPO RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
pan3-like; AltName: Full=PAB1P-dependent
poly(A)-nuclease
gi|347834166|emb|CAB11083.2| poly(A)-specific ribonuclease complex subunit Pan3 (predicted)
[Schizosaccharomyces pombe]
Length = 681
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 17/173 (9%)
Query: 153 SYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRL 212
S A L LI L+ + R + L+P + + ++V L D E L++++EN RL
Sbjct: 500 STDASLVELIEVLIFNEELR-IQTLLPTMLSYMVNNYESVLLMEDVYETYLAEQVENDRL 558
Query: 213 FRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLH-QVQEDG------------- 258
RLL+KL +++RPE DP WS +G ++++LFR Y+ Q +D
Sbjct: 559 LRLLLKLEFLDDRPEYVDDPDWSASGVYFVIRLFRKYMFQVQTIDDASKKPTLQSTTTPP 618
Query: 259 RPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
R L+ +H++ CLNKLDAGT E+I L DE + +++S+ E+K ++ +F EL
Sbjct: 619 RKLLNKAHLLSCLNKLDAGTDEQILL--EDEFTRIIMSFKEVKTTINTAFMEL 669
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 93/161 (57%), Gaps = 16/161 (9%)
Query: 327 LLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINE 386
+L +++ + L+P + + ++V L D E L++++EN RL RLL+KL +++
Sbjct: 511 VLIFNEELRIQTLLPTMLSYMVNNYESVLLMEDVYETYLAEQVENDRLLRLLLKLEFLDD 570
Query: 387 RPELNLDPTWSETGDRYMLKLFRDYLLH-QVQEDG-------------RPWLDMSHIVHC 432
RPE DP WS +G ++++LFR Y+ Q +D R L+ +H++ C
Sbjct: 571 RPEYVDDPDWSASGVYFVIRLFRKYMFQVQTIDDASKKPTLQSTTTPPRKLLNKAHLLSC 630
Query: 433 LNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
LNKLDAGT E+I L DE + +++S+ E+K ++ +F EL
Sbjct: 631 LNKLDAGTDEQILL--EDEFTRIIMSFKEVKTTINTAFMEL 669
>gi|302836616|ref|XP_002949868.1| hypothetical protein VOLCADRAFT_47929 [Volvox carteri f.
nagariensis]
gi|300264777|gb|EFJ48971.1| hypothetical protein VOLCADRAFT_47929 [Volvox carteri f.
nagariensis]
Length = 73
Score = 81.6 bits (200), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/77 (55%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 202 ELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQED-GRP 260
ELSKE +NGRL RLL KL + ERP D TW ETGDRY+LKLFRD++ H D G P
Sbjct: 1 ELSKEADNGRLLRLLAKLNFVTERP----DSTWPETGDRYVLKLFRDFVFHAAAPDTGAP 56
Query: 261 WLDMSHIVHCLNKLDAG 277
LD +V LNK+ G
Sbjct: 57 LLDWGLLVEALNKVMPG 73
Score = 81.6 bits (200), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/77 (55%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 364 ELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQED-GRP 422
ELSKE +NGRL RLL KL + ERP D TW ETGDRY+LKLFRD++ H D G P
Sbjct: 1 ELSKEADNGRLLRLLAKLNFVTERP----DSTWPETGDRYVLKLFRDFVFHAAAPDTGAP 56
Query: 423 WLDMSHIVHCLNKLDAG 439
LD +V LNK+ G
Sbjct: 57 LLDWGLLVEALNKVMPG 73
>gi|19112926|ref|NP_596134.1| serine/threonine protein kinase, PAN complex subunit, Ppk26
[Schizosaccharomyces pombe 972h-]
gi|74698429|sp|Q9UST1.1|PAN3_SCHPO RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
pan3; AltName: Full=PAB1P-dependent poly(A)-nuclease;
AltName: Full=Protein kinase domain-containing protein
ppk26
gi|6048303|emb|CAB58166.1| serine/threonine protein kinase, PAN complex subunit, Ppk26
[Schizosaccharomyces pombe]
Length = 589
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 117 QDDLTALGKLILAM-TCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS-VHQKRTV 174
+ D LG +I + T R+ M ++ ++ + +YS + +LY +S V + + +
Sbjct: 395 KQDFVDLGVVIANLATGRTDM-----DMSSAARAIYSTYSREFYKAVLYFVSEVPEDKNL 449
Query: 175 VDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
+ ++ + + + + +E ++S ++GR F +L K+ I + + +
Sbjct: 450 ELFLQNHIESFFPIMSSPYVECEKMERKISDAFQHGRFFNILCKIMFIIDNNRASREYPI 509
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
+ + ++ L RDYL HQ+ ED P +D+ +++ L KLDAG + I L+SRDE +
Sbjct: 510 AREKEISLIYLLRDYLFHQIDEDECPVIDLYQVLNRLGKLDAGINQAIALISRDELDCVS 569
Query: 295 VSYAELKQCLDQSF 308
VSY ELK LD +
Sbjct: 570 VSYGELKAWLDNVY 583
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%)
Query: 347 YYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLK 406
++ + + + + +E ++S ++GR F +L K+ I + + + + + ++
Sbjct: 460 FFPIMSSPYVECEKMERKISDAFQHGRFFNILCKIMFIIDNNRASREYPIAREKEISLIY 519
Query: 407 LFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCL 466
L RDYL HQ+ ED P +D+ +++ L KLDAG + I L+SRDE + VSY ELK L
Sbjct: 520 LLRDYLFHQIDEDECPVIDLYQVLNRLGKLDAGINQAIALISRDELDCVSVSYGELKAWL 579
Query: 467 DQSF 470
D +
Sbjct: 580 DNVY 583
>gi|422294290|gb|EKU21590.1| hypothetical protein NGA_0369010, partial [Nannochloropsis gaditana
CCMP526]
Length = 363
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 247 RDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQ 306
+DY+ HQ E GRP LD+ H+VH LN+LD+G EKI LMSRD ++++VS+ ++K+CL+
Sbjct: 28 QDYVYHQEDEGGRPVLDLGHVVHSLNRLDSGDPEKILLMSRDGHTMIIVSFQDVKRCLEA 87
Query: 307 S---FHELSSSASLTPK 320
+ + E+++ A+ TP+
Sbjct: 88 AWLEYCEIANPAAATPE 104
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 409 RDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQ 468
+DY+ HQ E GRP LD+ H+VH LN+LD+G EKI LMSRD ++++VS+ ++K+CL+
Sbjct: 28 QDYVYHQEDEGGRPVLDLGHVVHSLNRLDSGDPEKILLMSRDGHTMIIVSFQDVKRCLEA 87
Query: 469 S---FHELSSSASLTPK 482
+ + E+++ A+ TP+
Sbjct: 88 AWLEYCEIANPAAATPE 104
>gi|241956101|ref|XP_002420771.1| poly(A)-nuclease subunit, putative; poly(A)-specific ribonuclease
subunit, putative [Candida dubliniensis CD36]
gi|223644113|emb|CAX41856.1| poly(A)-nuclease subunit, putative [Candida dubliniensis CD36]
Length = 693
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 14/195 (7%)
Query: 119 DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARS-YSADLRNLILYLLSVHQKRTVVDL 177
D+ +GK+++ + L A R++ L A + S D+ N + L + DL
Sbjct: 505 DIQKVGKVLMELAILLLPANMRQSNNVYNSLKASTNLSEDIVNNLRELNDLDTASEEFDL 564
Query: 178 MPM---IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTW 234
+ + ++ +D++Q D +E +L+ E+EN RLFRL+ KL L
Sbjct: 565 SEFSKRLTPKMFSIIDSLQNSSDFIEGQLTSELENARLFRLMTKLNY--------LIHDN 616
Query: 235 SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLV 294
S T + ++KLF +Y+ + + + ++++ ++ LNKLD G EKI L++ DE ++
Sbjct: 617 SNTENDKIIKLFLNYVYNCYDSNNKKVINLNKVLTNLNKLDCGIDEKILLVNNDE--CII 674
Query: 295 VSYAELKQCLDQSFH 309
+SY ELK+ +D F
Sbjct: 675 ISYKELKEIIDTKFR 689
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 10/126 (7%)
Query: 346 RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYML 405
+ ++ +D++Q D +E +L+ E+EN RLFRL+ KL L S T + ++
Sbjct: 574 KMFSIIDSLQNSSDFIEGQLTSELENARLFRLMTKLNY--------LIHDNSNTENDKII 625
Query: 406 KLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQC 465
KLF +Y+ + + + ++++ ++ LNKLD G EKI L++ DE +++SY ELK+
Sbjct: 626 KLFLNYVYNCYDSNNKKVINLNKVLTNLNKLDCGIDEKILLVNNDE--CIIISYKELKEI 683
Query: 466 LDQSFH 471
+D F
Sbjct: 684 IDTKFR 689
>gi|312383567|gb|EFR28609.1| hypothetical protein AND_03271 [Anopheles darlingi]
Length = 342
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLIL 163
PL V N H Q+DLTALGKLILA+ CRSL +VQRE LQTSI+L+ R YS+DLRN+IL
Sbjct: 287 PLTVVN-HRQQEDLTALGKLILALACRSLQSVQREQLQTSIELVTRHYSSDLRNIIL 342
>gi|213404746|ref|XP_002173145.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Schizosaccharomyces japonicus yFS275]
gi|212001192|gb|EEB06852.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Schizosaccharomyces japonicus yFS275]
Length = 682
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Query: 162 ILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 221
+L +L K T L+P+I + L D E+ +++ +E+ RL RLL KL
Sbjct: 523 LLQVLMNDPKVTARKLVPIIFPHSLENYERSLLLEDYYESLMARYLEDDRLLRLLCKLEF 582
Query: 222 INERPELNLDPTWSETGDRYMLKLFRDYLLH-QVQEDGRPWLDMSHIVHCLNKLDAGTQE 280
+++RPE D W +G Y + LFR YL +V DG +D +H++ CLNKLD GT+E
Sbjct: 583 LDDRPEHADDTAWGMSGMYYPIILFRKYLARLRVDSDGTKSMDYAHMLACLNKLDVGTEE 642
Query: 281 KICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
+ L DE S ++VSY ELK + +F +L AS
Sbjct: 643 NVFL--EDEFSRILVSYKELKNLIRMAFLDLEKRAS 676
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 3/147 (2%)
Query: 333 KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 392
K T L+P+I + L D E+ +++ +E+ RL RLL KL +++RPE
Sbjct: 532 KVTARKLVPIIFPHSLENYERSLLLEDYYESLMARYLEDDRLLRLLCKLEFLDDRPEHAD 591
Query: 393 DPTWSETGDRYMLKLFRDYLLH-QVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451
D W +G Y + LFR YL +V DG +D +H++ CLNKLD GT+E + L DE
Sbjct: 592 DTAWGMSGMYYPIILFRKYLARLRVDSDGTKSMDYAHMLACLNKLDVGTEENVFL--EDE 649
Query: 452 QSVLVVSYAELKQCLDQSFHELSSSAS 478
S ++VSY ELK + +F +L AS
Sbjct: 650 FSRILVSYKELKNLIRMAFLDLEKRAS 676
>gi|149238125|ref|XP_001524939.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|158514330|sp|A5E2Y4.1|PAN3_LODEL RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|146451536|gb|EDK45792.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 794
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 22/168 (13%)
Query: 145 TSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELS 204
T L+ YS D+ IL +S H + T ++ +Q D +E +LS
Sbjct: 646 TDPSLLQEPYSFDMDQFILQYISSH---------------FMTLMNKLQNSHDWVELQLS 690
Query: 205 KEMENGRLFRLLVKLG-TINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
E+EN RLFRL+ K+ I+E P +L+ ++K+F++ L + V +G+ ++
Sbjct: 691 TELENARLFRLMTKINFIISEMPTYDLN----SQNRLKIIKVFQENLFNSVGPNGKKVVN 746
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
M ++ LNKLD G EK L+S E +++++ E+K+ +D F L
Sbjct: 747 MDRVLVNLNKLDCGIDEKTLLISDKE--CMIITFKEIKELIDTQFRLL 792
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 78/136 (57%), Gaps = 7/136 (5%)
Query: 339 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG-TINERPELNLDPTWS 397
++ I + + T ++ +Q D +E +LS E+EN RLFRL+ K+ I+E P +L+
Sbjct: 663 ILQYISSHFMTLMNKLQNSHDWVELQLSTELENARLFRLMTKINFIISEMPTYDLN---- 718
Query: 398 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 457
++K+F++ L + V +G+ ++M ++ LNKLD G EK L+S E +++
Sbjct: 719 SQNRLKIIKVFQENLFNSVGPNGKKVVNMDRVLVNLNKLDCGIDEKTLLISDKE--CMII 776
Query: 458 SYAELKQCLDQSFHEL 473
++ E+K+ +D F L
Sbjct: 777 TFKEIKELIDTQFRLL 792
>gi|68467841|ref|XP_722079.1| hypothetical protein CaO19.11493 [Candida albicans SC5314]
gi|68468158|ref|XP_721918.1| hypothetical protein CaO19.4010 [Candida albicans SC5314]
gi|74656627|sp|Q5AK10.1|PAN3_CANAL RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit
PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease
gi|46443861|gb|EAL03140.1| hypothetical protein CaO19.4010 [Candida albicans SC5314]
gi|46444027|gb|EAL03305.1| hypothetical protein CaO19.11493 [Candida albicans SC5314]
Length = 698
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 10/125 (8%)
Query: 184 RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYML 243
+ + +D++Q D +E +L+ E+EN RLFRL+ KL L S + + ++
Sbjct: 579 KMFNIIDSLQNSSDFIEGQLTSELENARLFRLMTKLNY--------LIHDNSNSENDKII 630
Query: 244 KLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQC 303
KLF +Y+ + + + ++++ ++ LNKLD G EKI L++ DE +++SY ELK+
Sbjct: 631 KLFLNYVYNCYDSNNKKVINLNKVLINLNKLDCGIDEKILLVNNDE--CIIISYKELKEI 688
Query: 304 LDQSF 308
+D F
Sbjct: 689 IDTKF 693
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 10/125 (8%)
Query: 346 RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYML 405
+ + +D++Q D +E +L+ E+EN RLFRL+ KL L S + + ++
Sbjct: 579 KMFNIIDSLQNSSDFIEGQLTSELENARLFRLMTKLNY--------LIHDNSNSENDKII 630
Query: 406 KLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQC 465
KLF +Y+ + + + ++++ ++ LNKLD G EKI L++ DE +++SY ELK+
Sbjct: 631 KLFLNYVYNCYDSNNKKVINLNKVLINLNKLDCGIDEKILLVNNDE--CIIISYKELKEI 688
Query: 466 LDQSF 470
+D F
Sbjct: 689 IDTKF 693
>gi|238882890|gb|EEQ46528.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 697
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 184 RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYML 243
+ + +D++Q D +E +L+ E+EN RLFRL+ KL + D + SE ++
Sbjct: 578 KMFNIIDSLQNSSDFIEGQLTSELENARLFRLMTKLNYLIH------DNSNSENDK--II 629
Query: 244 KLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQC 303
KLF +Y+ + + + ++++ ++ LNKLD G EKI L++ DE +++SY ELK+
Sbjct: 630 KLFLNYVYNCYDSNNKKVINLNKVLINLNKLDCGIDEKILLVNNDE--CIIISYKELKEI 687
Query: 304 LDQSF 308
+D F
Sbjct: 688 IDTKF 692
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 346 RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYML 405
+ + +D++Q D +E +L+ E+EN RLFRL+ KL + D + SE ++
Sbjct: 578 KMFNIIDSLQNSSDFIEGQLTSELENARLFRLMTKLNYLIH------DNSNSENDK--II 629
Query: 406 KLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQC 465
KLF +Y+ + + + ++++ ++ LNKLD G EKI L++ DE +++SY ELK+
Sbjct: 630 KLFLNYVYNCYDSNNKKVINLNKVLINLNKLDCGIDEKILLVNNDE--CIIISYKELKEI 687
Query: 466 LDQSF 470
+D F
Sbjct: 688 IDTKF 692
>gi|391325133|ref|XP_003737094.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit
3-like [Metaseiulus occidentalis]
Length = 213
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 20/137 (14%)
Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV----KLGTINERPEL 228
T+ ++ +G R + + Q LE EL+KE++NGRLFR+L K+G +E+
Sbjct: 70 TMNKIIASLGTRVFEYMTLCQTQKGILETELAKEIDNGRLFRVLYRFFDKVGKYDEQ--- 126
Query: 229 NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD 288
+S T L++F++YLL + M +V LNKLDAG +EKI L S
Sbjct: 127 -----FSGTDGAQALQMFKNYLLSRKT--------MYEVVSGLNKLDAGVREKIRLESFA 173
Query: 289 EQSVLVVSYAELKQCLD 305
E +V VSYAEL+Q ++
Sbjct: 174 ESTVKFVSYAELRQIME 190
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 20/137 (14%)
Query: 335 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV----KLGTINERPEL 390
T+ ++ +G R + + Q LE EL+KE++NGRLFR+L K+G +E+
Sbjct: 70 TMNKIIASLGTRVFEYMTLCQTQKGILETELAKEIDNGRLFRVLYRFFDKVGKYDEQ--- 126
Query: 391 NLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRD 450
+S T L++F++YLL + M +V LNKLDAG +EKI L S
Sbjct: 127 -----FSGTDGAQALQMFKNYLLSRKT--------MYEVVSGLNKLDAGVREKIRLESFA 173
Query: 451 EQSVLVVSYAELKQCLD 467
E +V VSYAEL+Q ++
Sbjct: 174 ESTVKFVSYAELRQIME 190
>gi|255723427|ref|XP_002546647.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240130778|gb|EER30341.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 740
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 181 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDR 240
+ + T ++ ++ D +E++L E+EN RLFRL+ KL + + D T TG+
Sbjct: 610 LSGKMLTVINNLEDSNDFMESQLGSELENARLFRLMTKLNYLIYD---DSDKTGVATGNN 666
Query: 241 YMLKLFRDYLLHQV---QEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 297
+L+LF +YL + + L+++ ++ LNKLD G EK+ L+++DE +++SY
Sbjct: 667 KILRLFLNYLYNSYDSSNNKNKKVLNLNKVLINLNKLDCGIDEKLLLINKDE--CIIISY 724
Query: 298 AELKQCLDQSF 308
ELK+ +D F
Sbjct: 725 KELKEIIDNKF 735
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 343 IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDR 402
+ + T ++ ++ D +E++L E+EN RLFRL+ KL + + D T TG+
Sbjct: 610 LSGKMLTVINNLEDSNDFMESQLGSELENARLFRLMTKLNYLIYD---DSDKTGVATGNN 666
Query: 403 YMLKLFRDYLLHQV---QEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 459
+L+LF +YL + + L+++ ++ LNKLD G EK+ L+++DE +++SY
Sbjct: 667 KILRLFLNYLYNSYDSSNNKNKKVLNLNKVLINLNKLDCGIDEKLLLINKDE--CIIISY 724
Query: 460 AELKQCLDQSF 470
ELK+ +D F
Sbjct: 725 KELKEIIDNKF 735
>gi|448532998|ref|XP_003870528.1| Pan3 protein [Candida orthopsilosis Co 90-125]
gi|380354883|emb|CCG24399.1| Pan3 protein [Candida orthopsilosis]
Length = 791
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 76/132 (57%), Gaps = 6/132 (4%)
Query: 184 RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL---NLDP-TWSETGD 239
+ ++ ++++Q D E++L+ E+EN RLFRLL K+ + + NL+ + ++
Sbjct: 660 KTFSTVNSIQNSSDYFESQLTSELENSRLFRLLTKINFVVNTTTIGDNNLNKLSLNDANQ 719
Query: 240 RYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAE 299
+++LF+ L +G +++ ++ LNKLD G EK+ L++ +E ++VSY E
Sbjct: 720 IKIIQLFQQNLFQFYDPNGARVINLHKVLVNLNKLDCGVDEKLLLVNENE--CIIVSYKE 777
Query: 300 LKQCLDQSFHEL 311
+K+ +D F +L
Sbjct: 778 VKEIIDCQFRQL 789
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 76/132 (57%), Gaps = 6/132 (4%)
Query: 346 RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL---NLDP-TWSETGD 401
+ ++ ++++Q D E++L+ E+EN RLFRLL K+ + + NL+ + ++
Sbjct: 660 KTFSTVNSIQNSSDYFESQLTSELENSRLFRLLTKINFVVNTTTIGDNNLNKLSLNDANQ 719
Query: 402 RYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAE 461
+++LF+ L +G +++ ++ LNKLD G EK+ L++ +E ++VSY E
Sbjct: 720 IKIIQLFQQNLFQFYDPNGARVINLHKVLVNLNKLDCGVDEKLLLVNENE--CIIVSYKE 777
Query: 462 LKQCLDQSFHEL 473
+K+ +D F +L
Sbjct: 778 VKEIIDCQFRQL 789
>gi|354543398|emb|CCE40117.1| hypothetical protein CPAR2_101550 [Candida parapsilosis]
Length = 805
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 184 RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG-----TINERPELNLDPTWSETG 238
+ ++ +++++ D E++L+ E+EN RLFRLL K+ T + LN + ++
Sbjct: 674 KTFSTVNSLENSTDYFESQLTSELENARLFRLLTKINFIVNTTTGDENHLNKQ-SLNDAN 732
Query: 239 DRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYA 298
+++LF+ L +G +++ ++ LNKLD G EK+ L+ +E ++VSY
Sbjct: 733 QIKVIQLFQQNLFQYYDSNGARVINLHKVLVNLNKLDCGVDEKLLLVKENE--CIIVSYK 790
Query: 299 ELKQCLDQSFHEL 311
E+K+ +D F +L
Sbjct: 791 EVKEIVDSQFRQL 803
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 346 RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLG-----TINERPELNLDPTWSETG 400
+ ++ +++++ D E++L+ E+EN RLFRLL K+ T + LN + ++
Sbjct: 674 KTFSTVNSLENSTDYFESQLTSELENARLFRLLTKINFIVNTTTGDENHLNKQ-SLNDAN 732
Query: 401 DRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYA 460
+++LF+ L +G +++ ++ LNKLD G EK+ L+ +E ++VSY
Sbjct: 733 QIKVIQLFQQNLFQYYDSNGARVINLHKVLVNLNKLDCGVDEKLLLVKENE--CIIVSYK 790
Query: 461 ELKQCLDQSFHEL 473
E+K+ +D F +L
Sbjct: 791 EVKEIVDSQFRQL 803
>gi|226295234|gb|EEH50654.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
[Paracoccidioides brasiliensis Pb18]
Length = 625
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LI+ + S + N ++ AR+Y+ L+N + +LL QK
Sbjct: 485 DLQHQDLVNFGQLIVTLGANSPSVIH--NPTKVMEHFARAYTPQLKNSVFWLLGALQKDQ 542
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPE 227
R + + I ++ + D+ D L ++L +E+EN RL RLL KL INERPE
Sbjct: 543 ERNIDIFVTGISSQLISTFDSALHLDDQLTSDLCRELENARLVRLLTKLNFINERPE 599
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
L L Q+R + + I ++ + D+ D L ++L +E+EN RL RLL KL I
Sbjct: 535 LGALQKDQERNIDIFVTGISSQLISTFDSALHLDDQLTSDLCRELENARLVRLLTKLNFI 594
Query: 385 NERPE 389
NERPE
Sbjct: 595 NERPE 599
>gi|452825134|gb|EME32132.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 isoform 1
[Galdieria sulphuraria]
Length = 503
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 154 YSADLRNLILYLLSVHQKRT----VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMEN 209
YS D+ +++ +L+ H RT + + ++ + V LH D+LE EL + + +
Sbjct: 383 YSHDILHILSFLVD-HYNRTLPVSITQICSIVAPQIIYDYGHVWLHADTLEAELDRRLNS 441
Query: 210 GRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSH 266
RLF+L+ G + + + + WSET D+++L+LF DY+ H + R + SH
Sbjct: 442 SRLFQLISLFGFVLDWDDSSTISQWSETEDKFVLRLFYDYMFHPYDNEVRRFFLHSH 498
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 325 LYLLSVHQKRT----VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L L H RT + + ++ + V LH D+LE EL + + + RLF+L+
Sbjct: 391 LSFLVDHYNRTLPVSITQICSIVAPQIIYDYGHVWLHADTLEAELDRRLNSSRLFQLISL 450
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSH 428
G + + + + WSET D+++L+LF DY+ H + R + SH
Sbjct: 451 FGFVLDWDDSSTISQWSETEDKFVLRLFYDYMFHPYDNEVRRFFLHSH 498
>gi|207028254|ref|NP_001128699.1| PAN3 poly(A) specific ribonuclease subunit homolog [Xenopus laevis]
gi|197245589|gb|AAI68516.1| Unknown (protein for MGC:179832) [Xenopus laevis]
Length = 631
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLIL 163
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLIL
Sbjct: 585 QADLISLGKVVLALACNSLAGIQRENLQKAMELVNINYSSDLKNLIL 631
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 20/106 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+ GGTTYFY D AP P Y ++P T PH+ + P
Sbjct: 298 KATVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHIAYMQPK 340
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH 114
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 341 A---NAPSFFMADELRQELINRHLITMAQIDQADMPGVPAEVDSYH 383
>gi|294886883|ref|XP_002771901.1| hypothetical protein Pmar_PMAR023014 [Perkinsus marinus ATCC 50983]
gi|239875701|gb|EER03717.1| hypothetical protein Pmar_PMAR023014 [Perkinsus marinus ATCC 50983]
Length = 538
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 102/255 (40%), Gaps = 62/255 (24%)
Query: 119 DLTALGKLILAM-TCRSLMAV---QRENLQTSIDLMAR-SYSADLRNLILYLLSVHQKRT 173
DL LG+LIL+M T RS A+ + + + MA +YS DL++L LL+ + +
Sbjct: 219 DLICLGRLILSMATGRSDNALKIPEEMDASNGVGFMANPTYSDDLKSLAQILLTQVKDLS 278
Query: 174 VVDLMPMIGARY----YTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN------ 223
+ +Y + + D L NE E++N R+ +LL+KL TI
Sbjct: 279 NYPTSEQLAFKYCNHIVNKFETSLFTTDMLLNEFKLEVDNSRMLKLLIKLCTIAYCYPMN 338
Query: 224 -----------------------------------------ERPELNLDPTWSETGDRYM 242
ERP + + +R +
Sbjct: 339 YSGSLPSRAYQQSTASSSETAVLGRNANRGAQPNNGDAKRLERPSWAKNMNAQQMDERQL 398
Query: 243 LKLFRDYLLHQVQEDGRPWLDM-----SHIVHCLNKLDAGT-QEKICLMSRDEQSVLVVS 296
+ +F +YL QV P M H++ L K D GT E I L S+D ++ +
Sbjct: 399 VNMFMEYLFGQVVPGTSPPASMVANNLQHVLDGLAKADVGTLHETITLGSKDGADCVLAT 458
Query: 297 YAELKQCLDQSFHEL 311
+ ++K+ +D SF +L
Sbjct: 459 FGDIKRSVDGSFRDL 473
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 53/168 (31%)
Query: 359 DSLENELSKEMENGRLFRLLVKLGTIN--------------------------------- 385
D L NE E++N R+ +LL+KL TI
Sbjct: 306 DMLLNEFKLEVDNSRMLKLLIKLCTIAYCYPMNYSGSLPSRAYQQSTASSSETAVLGRNA 365
Query: 386 --------------ERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDM----- 426
ERP + + +R ++ +F +YL QV P M
Sbjct: 366 NRGAQPNNGDAKRLERPSWAKNMNAQQMDERQLVNMFMEYLFGQVVPGTSPPASMVANNL 425
Query: 427 SHIVHCLNKLDAGT-QEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
H++ L K D GT E I L S+D ++ ++ ++K+ +D SF +L
Sbjct: 426 QHVLDGLAKADVGTLHETITLGSKDGADCVLATFGDIKRSVDGSFRDL 473
>gi|290978766|ref|XP_002672106.1| predicted protein [Naegleria gruberi]
gi|284085680|gb|EFC39362.1| predicted protein [Naegleria gruberi]
Length = 356
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 117 QDDLTALGKLILAMTC--RSLM-AVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
++D G L++ + C R L A ++ + + ++ YS +L + + LL
Sbjct: 245 KEDFKHFGILLVELMCTFRELSDAPHALSVLNNSESISCKYSTELVDFVKTLL--QDDID 302
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPE 227
+ L+ I RY +L + + D++ENEL+KE+ENGRLFRLLVKL + + E
Sbjct: 303 LNKLISNIALRYVDELSTMYNYVDTIENELAKELENGRLFRLLVKLNFVAQHEE 356
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 339 LMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPE 389
L+ I RY +L + + D++ENEL+KE+ENGRLFRLLVKL + + E
Sbjct: 306 LISNIALRYVDELSTMYNYVDTIENELAKELENGRLFRLLVKLNFVAQHEE 356
>gi|221041352|dbj|BAH12353.1| unnamed protein product [Homo sapiens]
Length = 687
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 20/107 (18%)
Query: 9 QENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
+E GGTTYFY D AP P Y ++P T PHV + P
Sbjct: 395 KETVGGTTYFYT-----------------DTTPAPLTGMVFPNYHIYPPTAPHVAYMQPK 437
Query: 69 AATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHD 115
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH
Sbjct: 438 A---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHS 481
>gi|324499811|gb|ADY39929.1| Histone-lysine N-methyltransferase trr [Ascaris suum]
Length = 2347
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 11/57 (19%)
Query: 28 VPGAAGPAPGDDLSAPGVLSSPPGYT-------MHPGTPPHVRHKPPNAATVDHSSF 77
VPG PAPGD +S PG + +PP YT ++PG PP ++ PPN ++ H+SF
Sbjct: 1164 VPGQ--PAPGDVMS-PGAVRAPPPYTQMGGANNVYPGRPPMQQYIPPN-GSIGHASF 1216
>gi|313214614|emb|CBY40934.1| unnamed protein product [Oikopleura dioica]
Length = 373
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQR--ENLQTSIDLMARSYSADLRNLILYLLSVHQKRTV 174
QDDL LG+L+LA+ C S Q + + +L+ +S+SADL LI YLL
Sbjct: 309 QDDLFHLGRLLLALCCNSTQPFQGDVQVINQCAELVRKSFSADLFKLISYLLKPSSTGKS 368
Query: 175 VDLM 178
VD +
Sbjct: 369 VDAL 372
>gi|433543065|ref|ZP_20499479.1| hypothetical protein D478_05085 [Brevibacillus agri BAB-2500]
gi|432185604|gb|ELK43091.1| hypothetical protein D478_05085 [Brevibacillus agri BAB-2500]
Length = 1235
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 22 PSSGTEVPGAAGPAPG-DDLSAPGVLSSP--PGYTMHPGTPPHVRHKPPNAA 70
PS+G + G A PAPG SAPG S+P PG P PH + +PP AA
Sbjct: 710 PSAGQKDEGTAQPAPGLVTPSAPGTASTPSAPGAATTPSPGPHSQPQPPAAA 761
>gi|399047858|ref|ZP_10739697.1| DNA segregation ATPase, FtsK/SpoIIIE family [Brevibacillus sp.
CF112]
gi|398054166|gb|EJL46301.1| DNA segregation ATPase, FtsK/SpoIIIE family [Brevibacillus sp.
CF112]
Length = 1231
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 22 PSSGTEVPGAAGPAPG-DDLSAPGVLSSP--PGYTMHPGTPPHVRHKPPNAA 70
PS+G + G A PAPG SAPG S+P PG P PH + +PP AA
Sbjct: 706 PSAGQKDEGTAQPAPGLVTPSAPGTASTPSAPGAATTPSPGPHSQPQPPAAA 757
>gi|270000731|gb|EEZ97178.1| hypothetical protein TcasGA2_TC004365 [Tribolium castaneum]
Length = 1585
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 24/131 (18%)
Query: 248 DYLLHQVQEDGRPW--LDMSHIVHCLNKLDAGTQEKI------------------CLMSR 287
++LLH++Q + L + I+ L +L G E I CL +R
Sbjct: 1026 EFLLHELQHECHKSESLVLEPILMVLTQLSPGCNETINTQVLKYLCYIDVCMKSSCLRTR 1085
Query: 288 D---EQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIG 344
D S+ ++ + CLD+SF +S + ++ + L L +L + Q + D +P+
Sbjct: 1086 DLAARASIALIGEHSFQMCLDESFGRISGNLTMNERHGLLLQILHIVQSKD-FDKLPITT 1144
Query: 345 ARYYTQLDAVQ 355
+R Y LD ++
Sbjct: 1145 SRDYKNLDLLK 1155
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,739,326,055
Number of Sequences: 23463169
Number of extensions: 329242806
Number of successful extensions: 934691
Number of sequences better than 100.0: 427
Number of HSP's better than 100.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 932955
Number of HSP's gapped (non-prelim): 1142
length of query: 487
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 340
effective length of database: 8,910,109,524
effective search space: 3029437238160
effective search space used: 3029437238160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)