Query psy1282
Match_columns 487
No_of_seqs 220 out of 283
Neff 4.0
Searched_HMMs 46136
Date Fri Aug 16 20:40:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1282.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1282hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3741|consensus 100.0 2.5E-81 5.5E-86 658.1 24.5 194 116-309 455-650 (655)
2 KOG3741|consensus 100.0 3.3E-60 7.1E-65 499.0 10.6 177 287-471 472-650 (655)
3 KOG0591|consensus 75.7 20 0.00043 38.1 9.6 105 116-223 207-336 (375)
4 cd06632 STKc_MEKK1_plant Catal 74.2 9 0.00019 35.3 6.2 64 115-178 180-253 (258)
5 cd08217 STKc_Nek2 Catalytic do 72.5 12 0.00026 34.4 6.7 63 116-179 189-261 (265)
6 cd06619 PKc_MKK5 Catalytic dom 72.1 6 0.00013 37.8 4.7 91 116-211 172-279 (279)
7 smart00220 S_TKc Serine/Threon 71.8 14 0.00031 33.0 6.8 64 116-179 165-240 (244)
8 cd05068 PTKc_Frk_like Catalyti 71.5 15 0.00032 34.4 7.1 66 115-181 182-258 (261)
9 cd06623 PKc_MAPKK_plant_like C 71.3 13 0.00029 34.3 6.7 64 116-179 179-255 (264)
10 cd05116 PTKc_Syk Catalytic dom 70.3 14 0.0003 34.7 6.6 66 116-182 177-253 (257)
11 cd05112 PTKc_Itk Catalytic dom 69.1 18 0.00038 33.6 7.0 65 116-181 180-255 (256)
12 cd05058 PTKc_Met_Ron Catalytic 69.0 24 0.00053 32.9 7.9 67 116-182 181-257 (262)
13 cd08528 STKc_Nek10 Catalytic d 66.6 21 0.00046 33.5 7.1 65 116-181 192-267 (269)
14 cd06608 STKc_myosinIII_like Ca 66.3 15 0.00033 34.0 6.0 63 116-179 197-271 (275)
15 cd05050 PTKc_Musk Catalytic do 65.8 25 0.00055 33.5 7.5 64 116-180 211-285 (288)
16 KOG1989|consensus 65.6 6.5 0.00014 45.5 3.9 73 105-181 222-308 (738)
17 cd06605 PKc_MAPKK Catalytic do 64.8 22 0.00048 33.1 6.8 64 115-178 177-255 (265)
18 cd05075 PTKc_Axl Catalytic dom 64.6 30 0.00065 32.4 7.6 66 115-181 192-268 (272)
19 cd08218 STKc_Nek1 Catalytic do 64.1 18 0.00039 33.6 6.0 63 116-179 180-252 (256)
20 cd08530 STKc_CNK2-like Catalyt 64.0 19 0.00042 33.1 6.1 64 116-179 180-252 (256)
21 cd05091 PTKc_Ror2 Catalytic do 63.8 27 0.00059 33.1 7.3 66 116-181 205-280 (283)
22 cd06612 STKc_MST1_2 Catalytic 63.3 17 0.00037 33.6 5.7 64 115-179 177-252 (256)
23 cd07837 STKc_CdkB_plant Cataly 63.2 23 0.00049 33.8 6.6 64 115-178 190-289 (295)
24 cd07861 STKc_CDK1_euk Catalyti 63.1 23 0.00049 33.5 6.6 63 116-178 181-280 (285)
25 cd07839 STKc_CDK5 Catalytic do 63.0 27 0.00058 33.1 7.1 65 115-179 178-280 (284)
26 PF00069 Pkinase: Protein kina 63.0 18 0.00039 33.4 5.7 66 114-179 176-256 (260)
27 cd05070 PTKc_Fyn_Yrk Catalytic 62.7 27 0.00059 32.7 7.0 65 116-181 182-257 (260)
28 cd08224 STKc_Nek6_Nek7 Catalyt 62.7 28 0.0006 32.4 7.0 67 116-182 185-263 (267)
29 PF07714 Pkinase_Tyr: Protein 62.3 40 0.00086 32.1 8.1 66 114-180 182-258 (259)
30 cd05059 PTKc_Tec_like Catalyti 62.2 27 0.00059 32.7 6.9 65 116-181 180-255 (256)
31 cd05052 PTKc_Abl Catalytic dom 61.9 36 0.00079 32.0 7.7 65 117-182 185-260 (263)
32 cd06613 STKc_MAP4K3_like Catal 61.8 19 0.00041 33.4 5.7 62 116-178 183-258 (262)
33 cd08223 STKc_Nek4 Catalytic do 61.6 27 0.00058 32.4 6.7 62 116-178 181-252 (257)
34 cd05039 PTKc_Csk_like Catalyti 61.6 35 0.00076 31.8 7.5 65 116-181 178-253 (256)
35 cd05085 PTKc_Fer Catalytic dom 61.6 31 0.00068 31.9 7.1 65 116-181 173-248 (250)
36 cd05045 PTKc_RET Catalytic dom 61.4 35 0.00075 32.7 7.6 66 115-181 207-283 (290)
37 cd00192 PTKc Catalytic domain 61.1 27 0.00059 31.9 6.5 65 116-181 186-261 (262)
38 PHA02988 hypothetical protein; 60.9 31 0.00067 33.5 7.2 67 115-182 200-277 (283)
39 cd06617 PKc_MKK3_6 Catalytic d 60.7 17 0.00037 34.3 5.2 64 116-179 186-260 (283)
40 cd06649 PKc_MEK2 Catalytic dom 60.7 24 0.00053 35.0 6.6 27 153-179 272-300 (331)
41 cd05583 STKc_MSK_N N-terminal 60.5 11 0.00024 36.0 4.0 76 114-189 185-272 (288)
42 cd06628 STKc_MAPKKK_Byr2_like 60.3 25 0.00055 32.8 6.3 64 116-179 191-263 (267)
43 cd05072 PTKc_Lyn Catalytic dom 60.3 34 0.00073 32.0 7.1 65 116-181 183-258 (261)
44 cd05067 PTKc_Lck_Blk Catalytic 59.8 31 0.00068 32.2 6.9 65 116-181 182-257 (260)
45 cd08215 STKc_Nek Catalytic dom 59.6 25 0.00054 32.1 6.0 63 116-179 182-254 (258)
46 cd05069 PTKc_Yes Catalytic dom 59.5 41 0.00089 31.6 7.6 65 116-181 182-257 (260)
47 cd05060 PTKc_Syk_like Catalyti 58.1 40 0.00087 31.5 7.2 66 116-182 177-253 (257)
48 cd08229 STKc_Nek7 Catalytic do 58.1 35 0.00076 31.9 6.8 66 116-181 185-262 (267)
49 cd05094 PTKc_TrkC Catalytic do 58.0 40 0.00086 32.4 7.4 66 115-181 203-279 (291)
50 cd06606 STKc_MAPKKK Catalytic 57.9 29 0.00062 31.6 6.0 65 115-179 181-256 (260)
51 cd08221 STKc_Nek9 Catalytic do 57.8 31 0.00066 32.1 6.4 64 116-180 180-253 (256)
52 cd05044 PTKc_c-ros Catalytic d 57.6 24 0.00051 33.1 5.6 65 116-181 192-267 (269)
53 cd05036 PTKc_ALK_LTK Catalytic 57.5 41 0.00088 32.0 7.3 66 115-181 199-275 (277)
54 cd06625 STKc_MEKK3_like Cataly 57.4 32 0.00069 32.0 6.4 64 116-179 186-259 (263)
55 cd05078 PTK_Jak2_Jak3_rpt1 Pse 57.3 37 0.00081 31.9 6.9 66 115-181 183-257 (258)
56 cd06643 STKc_SLK Catalytic dom 57.2 27 0.00058 33.2 6.0 63 116-178 187-260 (282)
57 cd07835 STKc_CDK1_like Catalyt 57.1 36 0.00078 32.2 6.8 65 114-178 177-278 (283)
58 cd06627 STKc_Cdc7_like Catalyt 56.8 29 0.00064 31.8 6.0 64 115-178 177-249 (254)
59 cd08220 STKc_Nek8 Catalytic do 56.8 30 0.00065 31.9 6.1 63 116-179 180-252 (256)
60 cd05611 STKc_Rim15_like Cataly 56.5 22 0.00047 33.2 5.2 72 115-187 171-255 (260)
61 cd05035 PTKc_Axl_like Catalyti 56.4 40 0.00087 31.4 6.9 66 115-181 193-269 (273)
62 cd06634 STKc_TAO2 Catalytic do 56.0 48 0.001 32.4 7.7 63 116-179 193-266 (308)
63 cd06629 STKc_MAPKKK_Bck1_like 56.0 31 0.00067 32.4 6.1 64 116-179 191-268 (272)
64 cd05071 PTKc_Src Catalytic dom 55.8 54 0.0012 31.0 7.7 67 115-182 181-258 (262)
65 cd06635 STKc_TAO1 Catalytic do 55.7 60 0.0013 31.8 8.3 63 116-179 203-276 (317)
66 cd05090 PTKc_Ror1 Catalytic do 55.6 43 0.00094 31.8 7.1 66 115-181 204-280 (283)
67 smart00750 KIND kinase non-cat 55.3 51 0.0011 29.0 7.1 65 117-181 84-166 (176)
68 smart00219 TyrKc Tyrosine kina 55.2 39 0.00085 31.0 6.6 65 115-180 182-257 (258)
69 cd05148 PTKc_Srm_Brk Catalytic 55.1 52 0.0011 30.6 7.5 66 115-181 182-258 (261)
70 cd06609 STKc_MST3_like Catalyt 55.0 36 0.00077 32.2 6.4 64 115-179 176-250 (274)
71 cd07873 STKc_PCTAIRE1 Catalyti 54.9 45 0.00098 32.2 7.2 63 115-178 183-284 (301)
72 PTZ00283 serine/threonine prot 54.7 50 0.0011 35.7 8.2 65 115-180 223-297 (496)
73 cd05083 PTKc_Chk Catalytic dom 54.3 49 0.0011 30.8 7.2 65 116-181 176-251 (254)
74 cd05048 PTKc_Ror Catalytic Dom 54.2 53 0.0012 31.1 7.5 65 116-181 205-280 (283)
75 cd05093 PTKc_TrkB Catalytic do 54.1 51 0.0011 31.6 7.4 66 115-181 200-276 (288)
76 cd05089 PTKc_Tie1 Catalytic do 53.9 49 0.0011 32.0 7.3 65 116-181 197-272 (297)
77 cd05062 PTKc_IGF-1R Catalytic 53.8 53 0.0012 31.1 7.4 66 115-181 199-275 (277)
78 cd05122 PKc_STE Catalytic doma 53.7 33 0.00072 31.0 5.7 63 115-178 175-249 (253)
79 cd08529 STKc_FA2-like Catalyti 53.3 32 0.0007 31.7 5.7 63 116-179 180-252 (256)
80 cd07831 STKc_MOK Catalytic dom 52.6 45 0.00097 31.4 6.6 66 113-179 175-278 (282)
81 cd05074 PTKc_Tyro3 Catalytic d 52.6 57 0.0012 30.6 7.3 66 115-181 193-269 (273)
82 cd05043 PTK_Ryk Pseudokinase d 52.5 62 0.0014 30.6 7.6 68 115-183 197-275 (280)
83 cd05049 PTKc_Trk Catalytic dom 52.4 54 0.0012 30.9 7.2 65 116-181 203-278 (280)
84 cd05084 PTKc_Fes Catalytic dom 52.2 63 0.0014 30.0 7.5 66 115-181 174-250 (252)
85 cd07847 STKc_CDKL1_4 Catalytic 51.5 42 0.00091 31.6 6.2 64 116-179 180-282 (286)
86 cd06614 STKc_PAK Catalytic dom 51.3 36 0.00078 32.4 5.8 62 116-178 195-268 (286)
87 cd05082 PTKc_Csk Catalytic dom 51.1 57 0.0012 30.4 7.0 65 115-180 177-252 (256)
88 cd08222 STKc_Nek11 Catalytic d 51.0 48 0.001 31.0 6.5 62 116-178 184-255 (260)
89 cd05032 PTKc_InsR_like Catalyt 50.9 51 0.0011 31.0 6.7 65 116-181 200-275 (277)
90 cd05051 PTKc_DDR Catalytic dom 50.5 51 0.0011 31.4 6.7 66 115-181 210-294 (296)
91 cd05055 PTKc_PDGFR Catalytic d 50.5 69 0.0015 31.3 7.8 67 116-183 222-300 (302)
92 cd05113 PTKc_Btk_Bmx Catalytic 50.2 65 0.0014 30.3 7.3 64 116-180 180-254 (256)
93 cd07860 STKc_CDK2_3 Catalytic 50.1 56 0.0012 30.9 6.9 64 115-178 179-279 (284)
94 cd06631 STKc_YSK4 Catalytic do 49.6 53 0.0011 30.7 6.6 64 115-178 186-260 (265)
95 cd05101 PTKc_FGFR2 Catalytic d 49.2 67 0.0015 31.1 7.4 66 115-181 217-293 (304)
96 cd05104 PTKc_Kit Catalytic dom 48.9 47 0.001 34.0 6.6 67 116-182 295-372 (375)
97 cd05098 PTKc_FGFR1 Catalytic d 48.8 96 0.0021 30.1 8.4 67 116-183 221-298 (307)
98 PTZ00024 cyclin-dependent prot 48.6 54 0.0012 32.3 6.7 65 114-178 211-311 (335)
99 cd06636 STKc_MAP4K4_6 Catalyti 48.3 40 0.00088 31.9 5.6 64 116-179 205-278 (282)
100 cd07848 STKc_CDKL5 Catalytic d 48.2 54 0.0012 31.2 6.5 63 116-178 180-282 (287)
101 cd05034 PTKc_Src_like Catalyti 48.2 79 0.0017 29.4 7.5 66 115-181 182-258 (261)
102 cd08225 STKc_Nek5 Catalytic do 48.2 54 0.0012 30.2 6.3 63 116-179 181-253 (257)
103 cd05102 PTKc_VEGFR3 Catalytic 48.1 52 0.0011 32.4 6.6 68 115-182 254-332 (338)
104 cd06618 PKc_MKK7 Catalytic dom 48.1 47 0.001 32.0 6.1 63 116-178 197-271 (296)
105 cd05118 STKc_CMGC Catalytic do 48.0 66 0.0014 30.2 7.0 64 115-178 177-278 (283)
106 cd05041 PTKc_Fes_like Catalyti 48.0 68 0.0015 29.7 7.0 65 116-181 174-249 (251)
107 PTZ00267 NIMA-related protein 48.0 1.4E+02 0.0031 31.8 10.2 63 116-179 250-322 (478)
108 cd07869 STKc_PFTAIRE1 Catalyti 47.7 66 0.0014 31.2 7.1 22 115-136 182-203 (303)
109 PLN00009 cyclin-dependent kina 47.5 59 0.0013 31.1 6.7 71 116-189 183-290 (294)
110 cd06611 STKc_SLK_like Catalyti 47.2 48 0.001 31.4 5.9 63 116-178 187-260 (280)
111 cd08216 PK_STRAD Pseudokinase 47.2 41 0.00089 32.5 5.6 71 116-189 189-301 (314)
112 cd05061 PTKc_InsR Catalytic do 47.1 78 0.0017 30.4 7.4 65 116-181 200-275 (288)
113 cd05092 PTKc_TrkA Catalytic do 46.7 62 0.0014 30.9 6.7 65 116-181 203-278 (280)
114 cd06610 STKc_OSR1_SPAK Catalyt 46.7 40 0.00087 31.2 5.2 64 115-178 185-262 (267)
115 cd05114 PTKc_Tec_Rlk Catalytic 46.6 69 0.0015 29.9 6.8 65 116-181 180-255 (256)
116 cd08228 STKc_Nek6 Catalytic do 46.5 84 0.0018 29.4 7.4 66 116-181 185-262 (267)
117 cd07845 STKc_CDK10 Catalytic d 46.4 62 0.0013 31.4 6.7 64 114-178 186-288 (309)
118 cd05609 STKc_MAST Catalytic do 45.9 31 0.00068 33.4 4.6 72 114-186 193-276 (305)
119 cd07851 STKc_p38 Catalytic dom 45.3 59 0.0013 32.4 6.5 64 115-178 194-296 (343)
120 cd06615 PKc_MEK Catalytic doma 45.2 50 0.0011 32.3 5.9 21 116-136 177-197 (308)
121 cd05115 PTKc_Zap-70 Catalytic 45.2 73 0.0016 30.1 6.8 69 115-184 176-255 (257)
122 cd07880 STKc_p38gamma_MAPK12 C 44.7 68 0.0015 32.1 6.8 23 114-136 193-215 (343)
123 cd05106 PTKc_CSF-1R Catalytic 44.6 70 0.0015 32.8 7.1 67 116-182 293-370 (374)
124 cd05099 PTKc_FGFR4 Catalytic d 43.9 88 0.0019 30.6 7.4 65 116-181 215-290 (314)
125 cd05073 PTKc_Hck Catalytic dom 43.6 76 0.0017 29.8 6.6 65 116-181 182-257 (260)
126 cd05046 PTK_CCK4 Pseudokinase 43.5 86 0.0019 29.5 7.0 66 116-182 197-274 (275)
127 cd05596 STKc_ROCK Catalytic do 43.1 30 0.00066 35.3 4.2 63 115-178 225-302 (370)
128 cd05574 STKc_phototropin_like 42.9 69 0.0015 31.1 6.4 59 115-173 210-278 (316)
129 PTZ00266 NIMA-related protein 42.6 53 0.0012 39.6 6.5 64 115-178 221-293 (1021)
130 cd06644 STKc_STK10_LOK Catalyt 42.6 69 0.0015 30.7 6.3 62 116-178 194-267 (292)
131 cd07862 STKc_CDK6 Catalytic do 42.5 71 0.0015 30.4 6.3 63 116-178 188-285 (290)
132 cd06642 STKc_STK25-YSK1 Cataly 42.5 72 0.0016 30.2 6.4 64 115-179 179-252 (277)
133 cd06616 PKc_MKK4 Catalytic dom 42.3 63 0.0014 30.8 5.9 65 114-178 187-265 (288)
134 cd05080 PTKc_Tyk2_rpt2 Catalyt 42.2 44 0.00095 31.8 4.9 66 116-181 189-278 (283)
135 cd06624 STKc_ASK Catalytic dom 41.9 73 0.0016 30.0 6.3 64 115-178 189-263 (268)
136 cd08219 STKc_Nek3 Catalytic do 41.8 49 0.0011 30.8 5.0 63 116-179 179-251 (255)
137 cd06630 STKc_MEKK1 Catalytic d 41.8 43 0.00094 31.2 4.7 63 116-178 187-262 (268)
138 cd07832 STKc_CCRK Catalytic do 41.8 94 0.002 29.3 7.0 64 115-178 179-280 (286)
139 cd06659 STKc_PAK6 Catalytic do 41.2 86 0.0019 30.5 6.8 63 116-179 196-270 (297)
140 cd07863 STKc_CDK4 Catalytic do 41.1 77 0.0017 30.0 6.3 64 115-178 185-283 (288)
141 cd05600 STKc_Sid2p_Dbf2p Catal 40.8 38 0.00082 33.5 4.3 64 115-179 176-256 (333)
142 cd05077 PTK_Jak1_rpt1 Pseudoki 40.7 82 0.0018 29.9 6.5 67 114-181 186-261 (262)
143 cd06648 STKc_PAK_II Catalytic 40.7 75 0.0016 30.6 6.3 62 116-178 194-267 (285)
144 cd06637 STKc_TNIK Catalytic do 40.6 81 0.0018 29.6 6.3 63 116-178 195-267 (272)
145 cd07846 STKc_CDKL2_3 Catalytic 40.5 85 0.0018 29.7 6.5 20 116-135 180-199 (286)
146 cd05054 PTKc_VEGFR Catalytic d 40.5 92 0.002 31.3 7.1 68 116-183 254-332 (337)
147 cd07872 STKc_PCTAIRE2 Catalyti 40.3 98 0.0021 30.1 7.1 23 114-136 182-204 (309)
148 cd05040 PTKc_Ack_like Catalyti 39.7 1E+02 0.0023 28.5 6.9 65 116-181 179-255 (257)
149 cd05088 PTKc_Tie2 Catalytic do 39.7 81 0.0017 30.7 6.4 67 115-182 201-278 (303)
150 PLN00034 mitogen-activated pro 39.6 69 0.0015 32.1 6.0 64 116-179 252-327 (353)
151 cd05100 PTKc_FGFR3 Catalytic d 39.4 1.1E+02 0.0023 30.3 7.3 65 116-181 215-290 (334)
152 KOG0575|consensus 39.3 60 0.0013 37.0 6.0 64 114-178 195-267 (592)
153 cd06658 STKc_PAK5 Catalytic do 39.2 97 0.0021 30.1 6.8 63 116-179 197-271 (292)
154 cd06607 STKc_TAO Catalytic dom 39.0 83 0.0018 30.6 6.3 62 117-179 194-266 (307)
155 cd07871 STKc_PCTAIRE3 Catalyti 38.9 98 0.0021 29.8 6.8 22 115-136 182-203 (288)
156 cd06633 STKc_TAO3 Catalytic do 38.8 85 0.0018 30.8 6.4 63 116-179 199-272 (313)
157 cd07864 STKc_CDK12 Catalytic d 38.6 96 0.0021 29.6 6.6 23 114-136 195-217 (302)
158 cd05097 PTKc_DDR_like Catalyti 38.5 1E+02 0.0022 29.7 6.7 66 115-181 209-293 (295)
159 cd06621 PKc_MAPKK_Pek1_like Ca 38.4 92 0.002 29.9 6.4 64 116-179 182-265 (287)
160 cd06622 PKc_MAPKK_PBS2_like Ca 38.1 89 0.0019 29.7 6.3 64 116-179 186-261 (286)
161 cd06640 STKc_MST4 Catalytic do 38.0 87 0.0019 29.8 6.2 63 115-178 179-251 (277)
162 cd05056 PTKc_FAK Catalytic dom 37.9 1.2E+02 0.0027 28.4 7.2 67 115-182 186-263 (270)
163 cd07836 STKc_Pho85 Catalytic d 37.7 1.1E+02 0.0024 28.8 6.8 22 115-136 179-200 (284)
164 cd06639 STKc_myosinIIIB Cataly 37.3 80 0.0017 30.2 5.8 64 115-179 211-286 (291)
165 KOG0589|consensus 37.1 45 0.00098 36.5 4.5 64 116-180 185-258 (426)
166 PF13405 EF-hand_6: EF-hand do 37.0 17 0.00036 24.7 0.8 25 249-273 4-28 (31)
167 cd07854 STKc_MAPK4_6 Catalytic 36.3 1E+02 0.0023 30.7 6.7 23 114-136 196-218 (342)
168 cd07865 STKc_CDK9 Catalytic do 36.2 1.1E+02 0.0024 29.2 6.6 20 116-135 203-222 (310)
169 cd05579 STKc_MAST_like Catalyt 36.1 41 0.00089 30.9 3.5 70 116-186 180-260 (265)
170 cd06917 STKc_NAK1_like Catalyt 36.1 69 0.0015 30.2 5.1 64 114-178 179-253 (277)
171 cd05086 PTKc_Aatyk2 Catalytic 35.9 1.2E+02 0.0026 28.7 6.8 66 116-182 187-267 (268)
172 cd05033 PTKc_EphR Catalytic do 35.9 1.4E+02 0.0031 28.0 7.2 66 116-182 187-263 (266)
173 cd05053 PTKc_FGFR Catalytic do 35.7 88 0.0019 29.8 5.8 66 115-181 212-288 (293)
174 cd07833 STKc_CDKL Catalytic do 35.5 1E+02 0.0022 29.1 6.2 22 114-135 179-200 (288)
175 KOG0583|consensus 34.1 94 0.002 32.8 6.2 65 113-178 199-273 (370)
176 cd06654 STKc_PAK1 Catalytic do 33.9 1E+02 0.0022 29.9 6.1 63 116-179 195-269 (296)
177 cd07838 STKc_CDK4_6_like Catal 33.7 1E+02 0.0022 29.0 5.8 21 116-136 185-205 (287)
178 KOG0581|consensus 33.7 56 0.0012 35.2 4.4 62 118-179 258-334 (364)
179 cd06641 STKc_MST3 Catalytic do 33.7 1.5E+02 0.0031 28.3 6.9 63 116-179 180-252 (277)
180 cd05042 PTKc_Aatyk Catalytic d 33.7 1.5E+02 0.0032 27.9 6.9 67 115-182 187-268 (269)
181 cd05109 PTKc_HER2 Catalytic do 33.6 1.9E+02 0.0042 27.4 7.7 65 116-180 190-264 (279)
182 cd05064 PTKc_EphR_A10 Catalyti 33.6 2E+02 0.0043 27.2 7.8 65 116-181 187-262 (266)
183 cd06655 STKc_PAK2 Catalytic do 33.5 1.3E+02 0.0028 29.3 6.7 62 116-178 194-267 (296)
184 cd07859 STKc_TDY_MAPK_plant Ca 33.3 1.3E+02 0.0028 29.3 6.7 22 115-136 186-207 (338)
185 cd05622 STKc_ROCK1 Catalytic d 33.2 46 0.00099 34.1 3.6 64 115-179 225-303 (371)
186 COG2266 GTP:adenosylcobinamide 33.0 26 0.00057 34.2 1.7 28 419-451 25-52 (177)
187 cd05612 STKc_PRKX_like Catalyt 32.9 1.3E+02 0.0029 29.1 6.6 55 115-170 176-237 (291)
188 cd05595 STKc_PKB_beta Catalyti 32.7 91 0.002 30.9 5.6 55 115-170 173-234 (323)
189 cd05065 PTKc_EphR_B Catalytic 32.4 1.6E+02 0.0036 27.6 7.0 65 116-181 190-265 (269)
190 cd06645 STKc_MAP4K3 Catalytic 32.0 1.1E+02 0.0023 28.7 5.7 63 116-179 188-264 (267)
191 cd05631 STKc_GRK4 Catalytic do 31.6 19 0.00042 34.6 0.6 55 116-170 180-244 (285)
192 cd05580 STKc_PKA Catalytic dom 31.5 1.1E+02 0.0023 29.4 5.7 54 116-170 177-237 (290)
193 cd07866 STKc_BUR1 Catalytic do 31.4 1.4E+02 0.0029 28.6 6.3 21 116-136 206-226 (311)
194 cd05079 PTKc_Jak1_rpt2 Catalyt 31.4 1.2E+02 0.0026 28.9 6.0 66 116-181 191-280 (284)
195 PF00447 HSF_DNA-bind: HSF-typ 31.3 19 0.0004 31.0 0.4 28 378-405 3-30 (103)
196 cd06638 STKc_myosinIIIA Cataly 31.1 1.1E+02 0.0023 29.1 5.5 64 116-179 208-282 (286)
197 cd07840 STKc_CDK9_like Catalyt 31.0 1.9E+02 0.0041 27.1 7.1 22 115-136 180-201 (287)
198 cd05589 STKc_PKN Catalytic dom 30.7 1.2E+02 0.0026 29.9 6.0 54 116-170 180-240 (324)
199 cd05047 PTKc_Tie Catalytic dom 30.4 2.2E+02 0.0047 26.9 7.5 66 115-181 189-265 (270)
200 cd06646 STKc_MAP4K5 Catalytic 30.2 61 0.0013 30.4 3.7 64 116-179 188-264 (267)
201 cd07841 STKc_CDK7 Catalytic do 29.8 1.6E+02 0.0034 28.2 6.5 21 115-135 181-201 (298)
202 cd05607 STKc_GRK7 Catalytic do 29.7 36 0.00079 32.6 2.2 63 115-177 172-247 (277)
203 PTZ00036 glycogen synthase kin 29.7 1.6E+02 0.0034 31.2 7.0 64 115-178 249-349 (440)
204 PHA02882 putative serine/threo 29.7 2.1E+02 0.0045 27.8 7.4 65 116-180 212-292 (294)
205 cd08226 PK_STRAD_beta Pseudoki 29.6 1.4E+02 0.003 29.5 6.3 21 116-136 189-209 (328)
206 cd07849 STKc_ERK1_2_like Catal 29.3 1.4E+02 0.0031 29.5 6.3 22 115-136 188-209 (336)
207 cd05103 PTKc_VEGFR2 Catalytic 29.1 1.8E+02 0.004 29.0 7.1 66 116-181 260-336 (343)
208 COG2266 GTP:adenosylcobinamide 29.1 35 0.00075 33.4 1.9 28 257-289 25-52 (177)
209 cd00180 PKc Catalytic domain o 29.1 86 0.0019 26.8 4.2 40 115-179 172-213 (215)
210 cd05573 STKc_ROCK_NDR_like Cat 28.7 49 0.0011 32.6 2.9 62 116-178 209-283 (350)
211 cd07879 STKc_p38delta_MAPK13 C 28.6 1.7E+02 0.0037 29.2 6.7 22 115-136 193-214 (342)
212 cd05096 PTKc_DDR1 Catalytic do 28.4 1.9E+02 0.0041 28.0 6.8 66 115-181 218-302 (304)
213 cd07829 STKc_CDK_like Catalyti 28.3 1.9E+02 0.004 27.1 6.6 22 115-136 177-198 (282)
214 cd07844 STKc_PCTAIRE_like Cata 28.2 2E+02 0.0043 27.4 6.9 21 116-136 183-203 (291)
215 cd07842 STKc_CDK8_like Catalyt 28.2 1.4E+02 0.003 28.7 5.8 22 115-136 194-215 (316)
216 PF00009 GTP_EFTU: Elongation 28.1 1.4E+02 0.003 27.6 5.6 89 248-346 95-185 (188)
217 cd06653 STKc_MEKK3_like_1 Cata 27.8 1.6E+02 0.0034 27.7 6.0 62 116-177 188-258 (264)
218 cd06620 PKc_MAPKK_Byr1_like Ca 27.7 1.7E+02 0.0037 27.9 6.3 65 116-180 181-266 (284)
219 cd05076 PTK_Tyk2_rpt1 Pseudoki 27.6 1.9E+02 0.004 27.8 6.6 65 115-180 199-272 (274)
220 cd07855 STKc_ERK5 Catalytic do 27.6 1.6E+02 0.0034 29.2 6.2 62 115-177 190-291 (334)
221 cd07834 STKc_MAPK Catalytic do 27.5 1.9E+02 0.0041 28.3 6.7 22 115-136 185-206 (330)
222 cd05110 PTKc_HER4 Catalytic do 27.4 2.8E+02 0.0061 26.9 7.9 65 116-181 190-265 (303)
223 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 27.2 1.4E+02 0.0031 28.3 5.6 66 116-181 190-280 (284)
224 cd06651 STKc_MEKK3 Catalytic d 27.1 1.5E+02 0.0032 27.9 5.7 63 116-178 188-259 (266)
225 cd05063 PTKc_EphR_A2 Catalytic 26.7 3.1E+02 0.0067 25.6 7.8 65 116-181 189-264 (268)
226 cd07853 STKc_NLK Catalytic dom 26.6 1.9E+02 0.0041 29.2 6.7 22 115-136 183-204 (372)
227 cd05066 PTKc_EphR_A Catalytic 26.5 2.9E+02 0.0063 26.0 7.6 66 115-181 187-263 (267)
228 cd05581 STKc_PDK1 Catalytic do 26.2 1.9E+02 0.004 27.0 6.2 59 115-174 200-267 (280)
229 cd05107 PTKc_PDGFR_beta Cataly 26.0 2.6E+02 0.0056 29.5 7.8 68 115-182 319-397 (401)
230 cd07874 STKc_JNK3 Catalytic do 25.8 1.9E+02 0.0041 28.9 6.5 21 116-136 197-217 (355)
231 cd05620 STKc_nPKC_delta Cataly 25.8 1.4E+02 0.003 29.5 5.5 58 116-174 175-241 (316)
232 cd05571 STKc_PKB Catalytic dom 25.7 81 0.0018 31.2 3.8 54 116-170 174-234 (323)
233 PRK11409 antitoxin YefM; Provi 25.2 2E+02 0.0043 24.4 5.5 31 278-308 23-53 (83)
234 PF00447 HSF_DNA-bind: HSF-typ 25.2 23 0.0005 30.4 -0.1 28 216-243 3-30 (103)
235 cd05619 STKc_nPKC_theta Cataly 25.1 1.6E+02 0.0034 29.2 5.8 59 116-175 175-242 (316)
236 cd05591 STKc_nPKC_epsilon Cata 25.1 1.2E+02 0.0026 29.9 4.9 54 116-170 175-235 (321)
237 cd07878 STKc_p38beta_MAPK11 Ca 25.0 1.9E+02 0.0041 28.6 6.3 22 115-136 194-215 (343)
238 cd05111 PTK_HER3 Pseudokinase 24.8 3E+02 0.0065 26.3 7.4 65 116-181 190-265 (279)
239 cd05601 STKc_CRIK Catalytic do 24.6 38 0.00083 33.3 1.3 61 116-177 188-260 (330)
240 cd07870 STKc_PFTAIRE2 Catalyti 24.5 2.7E+02 0.0058 26.6 7.0 21 116-136 183-203 (291)
241 KOG1165|consensus 24.4 1.5E+02 0.0033 32.4 5.7 82 116-248 215-298 (449)
242 cd05038 PTKc_Jak_rpt2 Catalyti 24.2 1.7E+02 0.0037 27.4 5.5 66 116-181 191-280 (284)
243 PHA03369 capsid maturational p 24.2 1.7E+02 0.0037 33.8 6.2 40 74-128 441-486 (663)
244 cd06657 STKc_PAK4 Catalytic do 24.1 2.6E+02 0.0057 27.2 7.0 63 116-179 195-269 (292)
245 cd07858 STKc_TEY_MAPK_plant Ca 24.0 1.4E+02 0.0031 29.6 5.3 66 114-179 186-290 (337)
246 PF13986 DUF4224: Domain of un 24.0 38 0.00083 26.0 0.9 21 247-267 26-46 (47)
247 COG4136 ABC-type uncharacteriz 23.9 20 0.00043 35.1 -0.8 31 401-431 166-196 (213)
248 cd07877 STKc_p38alpha_MAPK14 C 23.7 2.2E+02 0.0048 28.5 6.5 22 115-136 196-217 (345)
249 cd05593 STKc_PKB_gamma Catalyt 23.7 1.1E+02 0.0024 30.5 4.3 54 116-170 174-234 (328)
250 PHA03390 pk1 serine/threonine- 23.6 1E+02 0.0022 29.5 3.9 63 116-178 185-260 (267)
251 KOG0616|consensus 23.3 1.5E+02 0.0033 31.8 5.3 53 116-169 220-279 (355)
252 cd08227 PK_STRAD_alpha Pseudok 23.1 2E+02 0.0044 28.3 6.1 26 153-178 278-305 (327)
253 cd07876 STKc_JNK2 Catalytic do 22.9 2.1E+02 0.0046 28.6 6.3 21 116-136 201-221 (359)
254 cd05095 PTKc_DDR2 Catalytic do 22.9 2.5E+02 0.0055 27.0 6.6 65 116-181 211-294 (296)
255 cd05628 STKc_NDR1 Catalytic do 22.8 1.9E+02 0.0042 29.1 6.0 62 116-178 215-291 (363)
256 PRK11409 antitoxin YefM; Provi 22.8 1.6E+02 0.0035 24.9 4.6 31 440-470 23-53 (83)
257 cd05108 PTKc_EGFR Catalytic do 22.6 3.8E+02 0.0083 26.2 7.8 65 116-181 190-265 (316)
258 PTZ00263 protein kinase A cata 22.4 1.4E+02 0.003 29.7 4.8 55 115-170 193-254 (329)
259 smart00415 HSF heat shock fact 22.4 28 0.0006 30.3 -0.1 29 377-405 5-33 (105)
260 cd07852 STKc_MAPK15 Catalytic 22.3 2.6E+02 0.0056 27.6 6.6 20 116-135 192-211 (337)
261 cd05057 PTKc_EGFR_like Catalyt 22.2 3.7E+02 0.008 25.5 7.4 67 115-181 189-265 (279)
262 cd07856 STKc_Sty1_Hog1 Catalyt 22.2 2.8E+02 0.006 27.6 6.9 22 115-136 184-205 (328)
263 cd06626 STKc_MEKK4 Catalytic d 22.0 2.6E+02 0.0056 25.9 6.2 64 115-178 184-259 (264)
264 PF13986 DUF4224: Domain of un 22.0 46 0.001 25.6 1.0 19 411-429 28-46 (47)
265 COG4820 EutJ Ethanolamine util 21.9 78 0.0017 32.3 2.8 55 409-484 39-104 (277)
266 COG4136 ABC-type uncharacteriz 21.8 20 0.00044 35.1 -1.1 31 239-269 166-196 (213)
267 cd06652 STKc_MEKK2 Catalytic d 21.6 2.4E+02 0.0051 26.5 6.0 63 116-178 188-259 (265)
268 cd05585 STKc_YPK1_like Catalyt 21.6 51 0.0011 32.4 1.5 54 116-170 172-232 (312)
269 PF14377 DUF4414: Domain of un 21.5 40 0.00088 29.6 0.7 16 79-94 9-24 (108)
270 cd05590 STKc_nPKC_eta Catalyti 21.5 1.5E+02 0.0032 29.4 4.7 54 116-170 175-235 (320)
271 cd05629 STKc_NDR_like_fungal C 21.3 85 0.0018 31.8 3.1 62 116-178 227-303 (377)
272 cd05037 PTK_Jak_rpt1 Pseudokin 21.0 3.1E+02 0.0066 25.3 6.5 67 114-181 183-258 (259)
273 cd06650 PKc_MEK1 Catalytic dom 20.7 2.8E+02 0.0061 27.7 6.6 26 153-178 270-297 (333)
274 cd05608 STKc_GRK1 Catalytic do 20.7 2.2E+02 0.0048 27.3 5.6 55 116-170 176-240 (280)
275 cd05630 STKc_GRK6 Catalytic do 20.6 1.4E+02 0.003 28.8 4.2 55 116-170 180-244 (285)
276 cd07843 STKc_CDC2L1 Catalytic 20.3 3.2E+02 0.0069 26.1 6.6 21 115-135 185-205 (293)
277 cd05584 STKc_p70S6K Catalytic 20.3 1.6E+02 0.0034 29.1 4.7 54 116-170 179-239 (323)
278 cd05570 STKc_PKC Catalytic dom 20.3 2.2E+02 0.0048 28.1 5.7 54 116-170 175-235 (318)
279 cd05123 STKc_AGC Catalytic dom 20.3 2.5E+02 0.0053 25.8 5.6 59 115-174 171-238 (250)
280 cd05599 STKc_NDR_like Catalyti 20.2 1.3E+02 0.0029 30.0 4.1 61 116-177 218-293 (364)
281 cd07867 STKc_CDC2L6 Catalytic 20.0 2.3E+02 0.0051 27.3 5.7 22 115-136 194-215 (317)
No 1
>KOG3741|consensus
Probab=100.00 E-value=2.5e-81 Score=658.13 Aligned_cols=194 Identities=54% Similarity=0.954 Sum_probs=190.2
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHH-HHHHhhhcCHHHHHHHHHHhccCCc-CCHHHHHHHHHHHHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTS-IDLMARSYSADLRNLILYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQ 193 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~s-l~~~~~~yS~dl~~~i~~Lls~~~~-k~i~~l~~~I~~r~~~~~d~~~ 193 (487)
||+|+++||.||++|||++.++.++++.+++ ++.+.++||.||+++|.||.+...+ |+|++|||||++|||++|+++|
T Consensus 455 Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~~~yS~D~rn~v~yl~s~~~~~ksI~~llp~~~~~ff~vmes~q 534 (655)
T KOG3741|consen 455 QQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRITTTYSTDLRNVVEYLESLNFREKSIQDLLPMIGSRFFTVMESVQ 534 (655)
T ss_pred hhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhhhhhhHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999999888887888877 9999999999999999999998876 9999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhhchHHHHHHhhcccccCCCCCCCCCCCcccchhHHHhhhhhcccccCCCCCcccChHHHHHHhhh
Q psy1282 194 LHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNK 273 (487)
Q Consensus 194 ~~~D~lE~eLs~ElENGRLfRLL~KL~fI~eRpE~~~D~~WSEtGdRYlLKLFRDYVFHQVDe~G~PvlDL~HVl~cLNK 273 (487)
..+|++|.+|+||+||||||||++|||||+||||+..|+.|||+||||+|||||||||||||+||+||+|++|||+||||
T Consensus 535 ~~~d~mE~~Ls~emENGRLfRll~Kln~I~dR~e~~~D~~WSesG~~fmi~LFRDYlFHqvtedg~p~lDlaHvl~CLNK 614 (655)
T KOG3741|consen 535 LKTDVMETELSREMENGRLFRLLLKLNFIDDRPEYVDDPDWSESGDRFMIKLFRDYLFHQVTEDGKPWLDLAHVLQCLNK 614 (655)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHhhhccCcccccCCcchhccceehHHHHHHhhheEeccCCChhhhHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcceEEEeecCCCeEEEEeHHHHHHHHHHHHH
Q psy1282 274 LDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFH 309 (487)
Q Consensus 274 LDaG~dEKI~LvSRDE~sclVVSYkELK~~id~aF~ 309 (487)
||||++|||+||||||.+||||||||||+|||++||
T Consensus 615 LDAG~~EkI~LvSrDE~t~IIvSY~ELK~~le~t~~ 650 (655)
T KOG3741|consen 615 LDAGIQEKILLVSRDELTCIIVSYKELKTILEKTFR 650 (655)
T ss_pred ccccchhheeEeccCCCcEEEEEHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999998
No 2
>KOG3741|consensus
Probab=100.00 E-value=3.3e-60 Score=498.96 Aligned_cols=177 Identities=52% Similarity=0.884 Sum_probs=162.0
Q ss_pred cCCCeEEEEeHHHH-HHHHHHHHHHHhhccCCCCCCCcceEeecCCCc-CCHHHHhhhHHHHHHHHHhHHHhhhhhhHHH
Q psy1282 287 RDEQSVLVVSYAEL-KQCLDQSFHELSSSASLTPKSTLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENE 364 (487)
Q Consensus 287 RDE~sclVVSYkEL-K~~id~aF~eL~~~s~ss~k~n~~~~Lls~~~~-k~i~~l~~~i~~r~~~~~d~~~~~~D~le~~ 364 (487)
+-|++.---+|++. ++.|... ++.+.++++.||.+...+ |+|.+|||||++|||+++++.|..+|++|.+
T Consensus 472 ~~~ns~~~d~~~~s~~~~I~~~--------yS~D~rn~v~yl~s~~~~~ksI~~llp~~~~~ff~vmes~q~~~d~mE~~ 543 (655)
T KOG3741|consen 472 GTENSNRTDSTQSSHLTRITTT--------YSTDLRNVVEYLESLNFREKSIQDLLPMIGSRFFTVMESVQLKTDVMETE 543 (655)
T ss_pred cccccccccchHHHHHHHhhhh--------hhHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 44444455556665 5555444 466677999999985444 9999999999999999999999999999999
Q ss_pred HHHHhhhchHHHHHHhhcccccCCCCCCCCCCCcccCchHHHhhhhhcccccCCCCCccccHhHHHHhccccCCCCcceE
Q psy1282 365 LSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444 (487)
Q Consensus 365 L~~ElENgRL~RLl~KL~~I~eRpe~~~d~~WsEtGdry~lkLFrDyvFHQvd~~G~pvlDl~HVl~cLNKLDaG~~Eki 444 (487)
|+||+||||||||++|||||+||||+..|+.|||+||||+|||||||||||||++|+||||++|||+||||||||++|||
T Consensus 544 Ls~emENGRLfRll~Kln~I~dR~e~~~D~~WSesG~~fmi~LFRDYlFHqvtedg~p~lDlaHvl~CLNKLDAG~~EkI 623 (655)
T KOG3741|consen 544 LSREMENGRLFRLLLKLNFIDDRPEYVDDPDWSESGDRFMIKLFRDYLFHQVTEDGKPWLDLAHVLQCLNKLDAGIQEKI 623 (655)
T ss_pred HHHHHhcchHHHHHHHHhhhccCcccccCCcchhccceehHHHHHHhhheEeccCCChhhhHHHHHHHhhhccccchhhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeecCCCeEEEEehHHHHHHHHHHHH
Q psy1282 445 CLMSRDEQSVLVVSYAELKQCLDQSFH 471 (487)
Q Consensus 445 ~LvSrDe~~~lvvSY~elK~~id~aF~ 471 (487)
+||||||.+||||||||||+|||++|+
T Consensus 624 ~LvSrDE~t~IIvSY~ELK~~le~t~~ 650 (655)
T KOG3741|consen 624 LLVSRDELTCIIVSYKELKTILEKTFR 650 (655)
T ss_pred eEeccCCCcEEEEEHHHHHHHHHHhhc
Confidence 999999999999999999999999999
No 3
>KOG0591|consensus
Probab=75.68 E-value=20 Score=38.06 Aligned_cols=105 Identities=27% Similarity=0.336 Sum_probs=64.1
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHH---HHHHH------HhhhcCHHHHHHHHHHhccCC--cCCHHHHHHHH---
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQ---TSIDL------MARSYSADLRNLILYLLSVHQ--KRTVVDLMPMI--- 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~---~sl~~------~~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I--- 181 (487)
-.-|+-+||.||..+|....|- ..+|+- +-++. -...||.++..+|...+...+ ++++-.++.-|
T Consensus 207 ~kSDiWslGCllyEMcaL~~PF-~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~ 285 (375)
T KOG0591|consen 207 FKSDIWSLGCLLYEMCALQSPF-YGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSE 285 (375)
T ss_pred cchhHHHHHHHHHHHHhcCCCc-ccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHH
Confidence 3569999999999999887552 223432 22221 113799999999999998664 35433333322
Q ss_pred -----------HHHHHHHHHHHHhhhhhHHHHHHHHhhhchHHHHHHhhcccc
Q psy1282 182 -----------GARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTIN 223 (487)
Q Consensus 182 -----------~~r~~~~~d~~~~~~D~lE~eLs~ElENGRLfRLL~KL~fI~ 223 (487)
+++.++- ++-+.-...+-+....|.| |||-|++--++.-.
T Consensus 286 l~~~s~~~~~~~~~l~~~-Enel~~~e~~ls~~~~E~e-~~l~qr~e~~~~~~ 336 (375)
T KOG0591|consen 286 LDGESFQLHRFGARLFED-ENELGVHEELLSTMFTEQE-GYLQQRLEVTGVFT 336 (375)
T ss_pred hcccchhHhHHHHhhhhh-hhhhhhHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Confidence 3333332 3333333444455566788 89988887776544
No 4
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=74.20 E-value=9 Score=35.34 Aligned_cols=64 Identities=22% Similarity=0.287 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHH--------HHhhhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSID--------LMARSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~--------~~~~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
+.+-|+-+||.++..|+++..+-........... .+...++.++++++..+++..+ +.++.+++
T Consensus 180 ~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 253 (258)
T cd06632 180 GLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELL 253 (258)
T ss_pred CchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHh
Confidence 4678999999999999998765211111111111 1223578999999999997654 57887764
No 5
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=72.49 E-value=12 Score=34.41 Aligned_cols=63 Identities=22% Similarity=0.306 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHH--------HhhhcCHHHHHHHHHHhccC--CcCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDL--------MARSYSADLRNLILYLLSVH--QKRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~--------~~~~yS~dl~~~i~~Lls~~--~~k~i~~l~~ 179 (487)
++.|+-+||.+++.+.++..+-.. .+...-.+. +...++.++++++..++... .+.++.+++.
T Consensus 189 ~~~Dv~slG~il~~l~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 189 EKSDIWSLGCLIYELCALSPPFTA-RNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred chhHHHHHHHHHHHHHHCCCcccC-cCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 679999999999999998754211 111221122 22368899999999999755 3688888754
No 6
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=72.06 E-value=6 Score=37.75 Aligned_cols=91 Identities=12% Similarity=0.208 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhh--hc----cHHHHHHHH---------hhhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQ--RE----NLQTSIDLM---------ARSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~--~~----n~~~sl~~~---------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+-|+-+||.++..++++..+-.. .. ........+ ...+|.++++++..++...+ +.++++++
T Consensus 172 ~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil 251 (279)
T cd06619 172 IHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLM 251 (279)
T ss_pred CcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHh
Confidence 568999999999999998754211 00 001111111 12488999999999997654 68888865
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHhhhch
Q psy1282 179 PMIGARYYTQLDAVQLHGDSLENELSKEMENGR 211 (487)
Q Consensus 179 ~~I~~r~~~~~d~~~~~~D~lE~eLs~ElENGR 211 (487)
.. .++...+ ....+...-...|++|-||
T Consensus 252 ~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~ 279 (279)
T cd06619 252 DH---PFIVQYN--DGNAEVVSMWVCRALEERR 279 (279)
T ss_pred cC---ccccccc--CccHHHHHHHHHHHHhccC
Confidence 43 3443332 3455777778999999887
No 7
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=71.83 E-value=14 Score=32.98 Aligned_cols=64 Identities=16% Similarity=0.185 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhhh----------cCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARS----------YSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~~----------yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..+.++..+-....+....++.+... ++.++.+++..++...+ +.++.+++.
T Consensus 165 ~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 165 KAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 57899999999999999865421112334444433321 88999999999998553 678887654
No 8
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=71.48 E-value=15 Score=34.43 Aligned_cols=66 Identities=11% Similarity=0.153 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
+.+-|+-+||.+++.|++ +..+- ...+....+..+.+ .++.++++++..++...+ +.+++++...+
T Consensus 182 ~~~~Di~slG~~l~el~t~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l 258 (261)
T cd05068 182 SIKSDVWSFGILLTEIVTYGRMPY-PGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKL 258 (261)
T ss_pred CchhhHHHHHHHHHHHHhcCCCCC-CCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 367899999999999998 65432 11223333333333 368999999999997654 68898876655
No 9
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=71.27 E-value=13 Score=34.31 Aligned_cols=64 Identities=14% Similarity=0.267 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhc--cHHHHHHHHh--------hh-cCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRE--NLQTSIDLMA--------RS-YSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~--n~~~sl~~~~--------~~-yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.+++.+.++..+-.... ...+.+..+. .. ||.+++++|..++...+ +.++.+++.
T Consensus 179 ~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 179 YAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred chhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 67899999999999999875421111 2222222222 23 88999999999998654 688887654
No 10
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=70.32 E-value=14 Score=34.71 Aligned_cols=66 Identities=6% Similarity=0.040 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
.+-|+-+||.++.++.+ +..+- ...+.....+.+.+ .++.+++++|..++...+ ++++++++..+.
T Consensus 177 ~~~Di~slG~~l~el~t~g~~p~-~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 177 SKSDVWSFGVLMWEAFSYGQKPY-KGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLR 253 (257)
T ss_pred chhHHHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHh
Confidence 58999999999999987 65431 11222333333332 478999999999997653 799988876654
No 11
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=69.12 E-value=18 Score=33.65 Aligned_cols=65 Identities=11% Similarity=0.127 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+.|+-+||.++..|.+ +..+- ...+....++.+. +.++.++++++.+++...+ ++++.+++..+
T Consensus 180 ~~~Dv~slG~~l~el~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 180 SKSDVWSFGVLMWEVFSEGKTPY-ENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred hHHHHHHHHHHHHHHHcCCCCCC-CcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 46899999999999987 55432 1122222233222 2378999999999997653 68998887654
No 12
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=68.97 E-value=24 Score=32.86 Aligned_cols=67 Identities=13% Similarity=0.143 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
.+-|+-+||.++.+|.++..+.....+.......+. ..++..+++++..++...+ +.++.+++..+.
T Consensus 181 ~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~ 257 (262)
T cd05058 181 TKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIE 257 (262)
T ss_pred hHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 578999999999999985332221222222222222 2357899999999997653 689988766553
No 13
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=66.58 E-value=21 Score=33.48 Aligned_cols=65 Identities=18% Similarity=0.263 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH-h--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM-A--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~-~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+-|+-+||.++..|+++..+-. ..+...-++.+ . ..++.+++++|..++...+ +.++.++..++
T Consensus 192 ~~~Dv~slG~ll~~l~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~ 267 (269)
T cd08528 192 EKADVWAFGCILYQMCTLQPPFY-STNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMI 267 (269)
T ss_pred hHHHHHHHHHHHHHHHhCCCccc-ccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHh
Confidence 67899999999999999875421 11222111111 1 2588999999999997554 68998876655
No 14
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=66.33 E-value=15 Score=34.04 Aligned_cols=63 Identities=11% Similarity=0.125 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh----------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA----------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..++++..+-. ..+....+..+. ..|+.+++++|..++...+ +.++.+++.
T Consensus 197 ~~~Dv~slG~il~~l~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 197 ARSDVWSLGITAIELADGKPPLC-DMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ccccHHHhHHHHHHHHhCCCCcc-ccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 45799999999999999876521 111111111111 1388999999999997654 688888753
No 15
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=65.82 E-value=25 Score=33.52 Aligned_cols=64 Identities=13% Similarity=0.105 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccC--CcCCHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVH--QKRTVVDLMPM 180 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~ 180 (487)
.+-|+-+||.+++.|++ +..+ ....+....+..+. ..++.++++++.+++... .+.+..++...
T Consensus 211 ~~~Dv~slG~il~el~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~ 285 (288)
T cd05050 211 TESDVWAYGVVLWEIFSYGMQP-YYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRI 285 (288)
T ss_pred chhHHHHHHHHHHHHHhCCCCC-CCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 57899999999999987 4322 11112223222222 246899999999999765 36888886554
No 16
>KOG1989|consensus
Probab=65.57 E-value=6.5 Score=45.50 Aligned_cols=73 Identities=23% Similarity=0.353 Sum_probs=52.1
Q ss_pred CCchhhhhhh----hhHHHHHHHHHHHHHHhcCCch-------hhhhccHHHHHHHHh-hhcCHHHHHHHHHHhccCC--
Q psy1282 105 ELPLEVDNYH----DLQDDLTALGKLILAMTCRSLM-------AVQRENLQTSIDLMA-RSYSADLRNLILYLLSVHQ-- 170 (487)
Q Consensus 105 ~lP~~vd~yh----~QqeDl~~lG~LiLaLA~~~~~-------a~~~~n~~~sl~~~~-~~yS~dl~~~i~~Lls~~~-- 170 (487)
-=|+-+|=|- ..+.|+-+||.||--||-.+.+ |+...|+ .+-- .+||..|+++|.++|.+.+
T Consensus 222 RsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y----~~P~~p~ys~~l~~LI~~mL~~nP~~ 297 (738)
T KOG1989|consen 222 RSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNY----SFPPFPNYSDRLKDLIRTMLQPNPDE 297 (738)
T ss_pred cChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccc----cCCCCccHHHHHHHHHHHHhccCccc
Confidence 4566677775 3899999999999999977654 1211111 1111 4799999999999998875
Q ss_pred cCCHHHHHHHH
Q psy1282 171 KRTVVDLMPMI 181 (487)
Q Consensus 171 ~k~i~~l~~~I 181 (487)
+.+|-+++..|
T Consensus 298 RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 298 RPNIYQVLEEI 308 (738)
T ss_pred CCCHHHHHHHH
Confidence 68998866544
No 17
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=64.81 E-value=22 Score=33.09 Aligned_cols=64 Identities=11% Similarity=0.291 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhh----ccHHHHHHHHh--------h-hcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQR----ENLQTSIDLMA--------R-SYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~----~n~~~sl~~~~--------~-~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
..+-|+-+||.+++.++++..+-... .+....++.+. . .+|.+++++|..++...+ +.++.+++
T Consensus 177 ~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll 255 (265)
T cd06605 177 SVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELL 255 (265)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHh
Confidence 36789999999999999987542111 12222222111 1 289999999999997554 68888764
No 18
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=64.65 E-value=30 Score=32.45 Aligned_cols=66 Identities=9% Similarity=0.052 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
+.+-|+-+||.++..+++ +..+- .........+.+. ..++.+++++|...+...+ +.+++++...+
T Consensus 192 ~~~~Di~slG~il~el~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 268 (272)
T cd05075 192 TTKSDVWSFGVTMWEIATRGQTPY-PGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCEL 268 (272)
T ss_pred ChHHHHHHHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 478999999999999998 44331 1112222233333 2477899999999997664 68988876554
No 19
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=64.08 E-value=18 Score=33.59 Aligned_cols=63 Identities=24% Similarity=0.350 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHH-HH-------hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSID-LM-------ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~-~~-------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+.|+-+||.++..|+++..+.. ..+...... .+ ...++.+++++|..++...+ +.++.+++.
T Consensus 180 ~~~Dv~slG~i~~~l~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 180 NKSDIWALGCVLYEMCTLKHAFE-AGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CccchhHHHHHHHHHHcCCCCcc-CCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 46899999999999999875432 122222111 11 23578999999999997654 688888754
No 20
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=63.99 E-value=19 Score=33.09 Aligned_cols=64 Identities=23% Similarity=0.342 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhcc--HHHHHHH-----HhhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQREN--LQTSIDL-----MARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n--~~~sl~~-----~~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+.+||.+++.|.++..+-...+. +...+.. +...++.++++++..+++..+ +.++.+++.
T Consensus 180 ~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 180 YKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 578999999999999988754211111 1111110 112478999999999997653 688877653
No 21
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=63.77 E-value=27 Score=33.12 Aligned_cols=66 Identities=14% Similarity=0.169 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
-+-|+-+||.++++|.+.........+....++.+. ..++.++.+++...+...+ +++++++...+
T Consensus 205 ~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l 280 (283)
T cd05091 205 IDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRL 280 (283)
T ss_pred cchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHh
Confidence 468999999999999873322222222333334333 2488899999999997664 68998876544
No 22
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=63.26 E-value=17 Score=33.56 Aligned_cols=64 Identities=13% Similarity=0.205 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH----------hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM----------ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~----------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
+++-|+-+||.+++.|+++..+-.. ......+..+ ...|+.+++++|..++...+ +.++.+++.
T Consensus 177 ~~~~Di~s~G~il~~l~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 177 NNKADIWSLGITAIEMAEGKPPYSD-IHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCC-cchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 3788999999999999998754211 1111111111 12578999999999997554 688887653
No 23
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=63.16 E-value=23 Score=33.79 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHH----------------------------------HHHHHhhhcCHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQT----------------------------------SIDLMARSYSADLRN 160 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~----------------------------------sl~~~~~~yS~dl~~ 160 (487)
..+-|+-+||.++..|+++..+-........ .+......++.++++
T Consensus 190 ~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (295)
T cd07837 190 STPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLD 269 (295)
T ss_pred CchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHH
Confidence 3578999999999999998753211111111 111222357889999
Q ss_pred HHHHHhccCC--cCCHHHHH
Q psy1282 161 LILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 161 ~i~~Lls~~~--~k~i~~l~ 178 (487)
+|.-++...+ +.++.+++
T Consensus 270 ~i~~~l~~~P~~R~~~~eil 289 (295)
T cd07837 270 LLQKMLRYDPAKRISAKAAL 289 (295)
T ss_pred HHHHHccCChhhcCCHHHHh
Confidence 9999997654 57777764
No 24
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=63.15 E-value=23 Score=33.49 Aligned_cols=63 Identities=11% Similarity=0.184 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHH-----------------------------------HHHHHhhhcCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQT-----------------------------------SIDLMARSYSADLRN 160 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~-----------------------------------sl~~~~~~yS~dl~~ 160 (487)
.+-|+-+||.++..|+|+.++-........ .+......+|+++++
T Consensus 181 ~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (285)
T cd07861 181 TPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLD 260 (285)
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHH
Confidence 568999999999999998643110000000 001112357899999
Q ss_pred HHHHHhccCC--cCCHHHHH
Q psy1282 161 LILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 161 ~i~~Lls~~~--~k~i~~l~ 178 (487)
+|..++...+ +.++++++
T Consensus 261 li~~~l~~dP~~Rpt~~~ll 280 (285)
T cd07861 261 LLEKMLIYDPAKRISAKKAL 280 (285)
T ss_pred HHHHHhcCChhhCCCHHHHh
Confidence 9999997654 67887765
No 25
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=63.00 E-value=27 Score=33.09 Aligned_cols=65 Identities=9% Similarity=0.128 Sum_probs=41.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHH------------------------------------HHHhhhcCHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSI------------------------------------DLMARSYSADL 158 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl------------------------------------~~~~~~yS~dl 158 (487)
+.+-|+-+||.++..|+++..+.....+....+ ......+|.++
T Consensus 178 ~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (284)
T cd07839 178 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTG 257 (284)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHH
Confidence 457899999999999998754421111111111 11223578899
Q ss_pred HHHHHHHhccCC--cCCHHHHHH
Q psy1282 159 RNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 159 ~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
+++|..++...+ +.++++++.
T Consensus 258 ~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 258 RDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHHHHHHhcCChhhcCCHHHHhc
Confidence 999999998654 577777643
No 26
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=63.00 E-value=18 Score=33.40 Aligned_cols=66 Identities=21% Similarity=0.331 Sum_probs=42.5
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchhhhh--ccHHHHHH-HHh-----hhc-----CHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLMAVQR--ENLQTSID-LMA-----RSY-----SADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~a~~~--~n~~~sl~-~~~-----~~y-----S~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
...+-|+-+||.++..++++..+-... .+....+. ... ... +.++.++|..+++..+ +.++++++
T Consensus 176 ~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~ 255 (260)
T PF00069_consen 176 YTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELL 255 (260)
T ss_dssp BSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHH
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHh
Confidence 457889999999999999987542111 01111111 111 111 3799999999998775 68888765
Q ss_pred H
Q psy1282 179 P 179 (487)
Q Consensus 179 ~ 179 (487)
.
T Consensus 256 ~ 256 (260)
T PF00069_consen 256 K 256 (260)
T ss_dssp T
T ss_pred c
Confidence 3
No 27
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=62.72 E-value=27 Score=32.69 Aligned_cols=65 Identities=15% Similarity=0.246 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccC--CcCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVH--QKRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I 181 (487)
-+-|+-+||.++..|.+ +.++- ...+....++.+.+ .++.++++++..++... .+.+++++...+
T Consensus 182 ~~~Di~slG~~l~~l~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 257 (260)
T cd05070 182 IKSDVWSFGILLTELVTKGRVPY-PGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFL 257 (260)
T ss_pred chhhhHHHHHHHHHHHhcCCCCC-CCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 47899999999999998 55432 12233334444433 37899999999999765 367888765443
No 28
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=62.67 E-value=28 Score=32.39 Aligned_cols=67 Identities=18% Similarity=0.291 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHHHHhcCCchhh-hhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAV-QRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~-~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
.+.|+-+||.++..|.++..+-. ...+.....+.+. ..++.+++++|..++...+ +.++.+++.++.
T Consensus 185 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~ 263 (267)
T cd08224 185 FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAK 263 (267)
T ss_pred chhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHH
Confidence 46799999999999998764421 1112222222221 2688899999999997653 789988776653
No 29
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=62.29 E-value=40 Score=32.06 Aligned_cols=66 Identities=12% Similarity=0.174 Sum_probs=44.1
Q ss_pred hhhHHHHHHHHHHHHHHhcC-CchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHH
Q psy1282 114 HDLQDDLTALGKLILAMTCR-SLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPM 180 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~-~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~ 180 (487)
.+.+-|+-+||-+|+.+.++ ..+- ...+....++.+. ..++.++.++|...++..+ ++++.+++..
T Consensus 182 ~~~ksDVysfG~~l~ei~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~ 258 (259)
T PF07714_consen 182 YTKKSDVYSFGMLLYEILTLGKFPF-SDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQE 258 (259)
T ss_dssp ESHHHHHHHHHHHHHHHHTTSSGTT-TTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHH
T ss_pred ccccccccccccccccccccccccc-cccccccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhc
Confidence 35899999999999999994 4332 2223333344443 2578999999999998664 6888887653
No 30
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=62.19 E-value=27 Score=32.66 Aligned_cols=65 Identities=8% Similarity=0.171 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccC--CcCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVH--QKRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I 181 (487)
-+-|+-+||.++..+++ +..+- ...+.....+.+. ..+|.++++++..++... .+.++.+++..+
T Consensus 180 ~~~Di~slG~il~~l~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 180 SKSDVWSFGVLMWEVFSEGKMPY-ERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred chhhHHHHHHHHHHHhccCCCCC-CCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 46899999999999998 44431 1111122222222 247999999999999755 378998887654
No 31
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=61.94 E-value=36 Score=31.98 Aligned_cols=65 Identities=11% Similarity=0.172 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccC--CcCCHHHHHHHHH
Q psy1282 117 QDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVH--QKRTVVDLMPMIG 182 (487)
Q Consensus 117 qeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I~ 182 (487)
+-|+-+||.++..|++ +..+- ...+..+..+.+. ..++.+++++|...+... .+.++.++..++.
T Consensus 185 ~~Dv~slG~il~el~t~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~ 260 (263)
T cd05052 185 KSDVWAFGVLLWEIATYGMSPY-PGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFE 260 (263)
T ss_pred hhHHHHHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 5799999999999997 55432 1122222222222 246889999999999765 3689998876653
No 32
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=61.79 E-value=19 Score=33.42 Aligned_cols=62 Identities=16% Similarity=0.161 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH------------hhhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM------------ARSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~------------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+-|+-+||.++..++++..+-... +..+....+ ...++.++++++..++...+ +.++.+++
T Consensus 183 ~~~Di~slG~~l~~~~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 258 (262)
T cd06613 183 GKCDIWALGITAIELAELQPPMFDL-HPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLL 258 (262)
T ss_pred chhhhHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 4579999999999999987542111 111111111 12478899999999997654 67887764
No 33
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=61.63 E-value=27 Score=32.38 Aligned_cols=62 Identities=23% Similarity=0.347 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHH--------HhhhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDL--------MARSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~--------~~~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+-|+-+||.+++.|+++..+-. ..+....... +...+++++.++|..++...+ +.++.+++
T Consensus 181 ~~~Dv~slG~il~~l~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 252 (257)
T cd08223 181 YKSDVWALGCCVYEMATLKHAFN-AKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSIL 252 (257)
T ss_pred chhhhHHHHHHHHHHHcCCCCCC-CCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 56899999999999999865421 1222221111 123588999999999998764 67887764
No 34
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=61.62 E-value=35 Score=31.77 Aligned_cols=65 Identities=11% Similarity=0.178 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccC--CcCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVH--QKRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I 181 (487)
.+-|+-+||.++.++++ +.++- ...+...-.+.+. ..++++++++|..++... .+.++.+++.++
T Consensus 178 ~~~Di~slG~il~~l~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 253 (256)
T cd05039 178 TKSDVWSFGILLWEIYSFGRVPY-PRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQL 253 (256)
T ss_pred cHHHHHHHHHHHHHHHhcCCCCC-CCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHH
Confidence 57899999999999986 55431 1122222222222 247899999999999755 368888877665
No 35
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=61.55 E-value=31 Score=31.88 Aligned_cols=65 Identities=9% Similarity=0.082 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
-+.|+-+||.+++.+.+ +..+ ....+.......+. ..++.++.+++..+++..+ +.++.++...+
T Consensus 173 ~~~Di~slG~ll~~~~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 173 SESDVWSYGILLWETFSLGVCP-YPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred chhHHHHHHHHHHHHhcCCCCC-CCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 46899999999999887 5543 11122222222222 2367999999999997653 68999886655
No 36
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=61.42 E-value=35 Score=32.70 Aligned_cols=66 Identities=17% Similarity=0.213 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
..+-|+-+||.++..|++ +.++- ...+...-.+.+. ..++.++++++...+...+ +.++.+++..+
T Consensus 207 ~~~~Di~slG~~l~el~t~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l 283 (290)
T cd05045 207 TTQSDVWSFGVLLWEIVTLGGNPY-PGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKEL 283 (290)
T ss_pred chHhHHHHHHHHHHHHHhcCCCCC-CCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence 467899999999999998 65431 1122233233332 2488999999999997664 68888865544
No 37
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=61.09 E-value=27 Score=31.94 Aligned_cols=65 Identities=12% Similarity=0.191 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHHHHhcC-CchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCR-SLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~-~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+-|+-+||.++..|.++ ..+- .........+.+. ..+|.++.+++..++...+ +.++.+++..+
T Consensus 186 ~~~Di~slG~il~~l~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 186 SKSDVWSFGVLLWEIFTLGATPY-PGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred hhhccHHHHHHHHHHHhcCCCCC-CCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 567999999999999874 4321 1112222233332 3578999999999997653 68888876543
No 38
>PHA02988 hypothetical protein; Provisional
Probab=60.91 E-value=31 Score=33.52 Aligned_cols=67 Identities=10% Similarity=0.228 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
+.+-|+-+||.++..|.++..+- ...+.....+.+. ..++.++++++..++...+ ++++++++..+.
T Consensus 200 ~~k~Di~SlGvil~el~~g~~Pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 200 TIKDDIYSLGVVLWEIFTGKIPF-ENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred cchhhhhHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 46889999999999999987552 1122233333331 1578999999999997664 689999876653
No 39
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=60.67 E-value=17 Score=34.33 Aligned_cols=64 Identities=13% Similarity=0.266 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhh-hccHH---HHHHHH-----hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQ-RENLQ---TSIDLM-----ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~-~~n~~---~sl~~~-----~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..++++..+-.. ..... ..+... ...||.+++++|..++...+ +.++++++.
T Consensus 186 ~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 186 VKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 457999999999999998754211 11111 111111 12589999999999997664 688887643
No 40
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=60.65 E-value=24 Score=34.96 Aligned_cols=27 Identities=15% Similarity=0.268 Sum_probs=22.3
Q ss_pred hcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 153 SYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 153 ~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.||.+++++|..++...+ +.++++++.
T Consensus 272 ~~~~~l~~li~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 272 VFTPDFQEFVNKCLIKNPAERADLKMLMN 300 (331)
T ss_pred cccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 489999999999997654 799998754
No 41
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=60.54 E-value=11 Score=35.97 Aligned_cols=76 Identities=20% Similarity=0.243 Sum_probs=45.3
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchhhhh--ccHHHHH-HHH-h------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLMAVQR--ENLQTSI-DLM-A------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~a~~~--~n~~~sl-~~~-~------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
+..+-|+-+||.++..|+++..+-... .+....+ ..+ . ..++.+++++|..+++..+ +.++.++...+
T Consensus 185 ~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l 264 (288)
T cd05583 185 HDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIK 264 (288)
T ss_pred CcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHh
Confidence 346789999999999999987542110 1111111 111 1 2478999999999998664 45555444444
Q ss_pred HHHHHHHH
Q psy1282 182 GARYYTQL 189 (487)
Q Consensus 182 ~~r~~~~~ 189 (487)
...++..+
T Consensus 265 ~~~~~~~~ 272 (288)
T cd05583 265 NHPFFQGI 272 (288)
T ss_pred cCcccccC
Confidence 44444433
No 42
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=60.35 E-value=25 Score=32.84 Aligned_cols=64 Identities=16% Similarity=0.259 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHH-------HhhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDL-------MARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~-------~~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+.|+-+||.++..|.++..+--...+....... +...++.+++++|..++...+ +.++.+++.
T Consensus 191 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 191 RKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred chhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 4689999999999999987542111111211111 113578999999999998664 678777643
No 43
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=60.26 E-value=34 Score=31.99 Aligned_cols=65 Identities=11% Similarity=0.180 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+-|+-+||.++..|.+ +..+-. ..+.......+.+ .++.++++++..++...+ +.+++++..++
T Consensus 183 ~~~Di~slG~~l~~l~t~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 258 (261)
T cd05072 183 IKSDVWSFGILLYEIVTYGKIPYP-GMSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVL 258 (261)
T ss_pred hhhhhhhhHHHHHHHHccCCCCCC-CCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 46899999999999997 654421 1122222222222 478999999999997654 68888876554
No 44
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=59.82 E-value=31 Score=32.25 Aligned_cols=65 Identities=12% Similarity=0.163 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
..-|+-+||.++..+++ +.++- ...+..+..+.+. ..++.+++++|..++...+ +.+++++...+
T Consensus 182 ~~~Di~slG~~l~el~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 257 (260)
T cd05067 182 IKSDVWSFGILLTEIVTYGRIPY-PGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVL 257 (260)
T ss_pred cccchHHHHHHHHHHHhCCCCCC-CCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHh
Confidence 57899999999999998 66542 1112222222222 2367899999999997654 68888776544
No 45
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=59.62 E-value=25 Score=32.11 Aligned_cols=63 Identities=22% Similarity=0.322 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.+++.+.++..+-. ..+..+....+. ..++.++++++..++...+ +.++.+++.
T Consensus 182 ~~~Dv~slG~~~~~l~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 182 YKSDIWSLGCVLYELCTLKHPFE-GENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ccccHHHHHHHHHHHHcCCCCCC-CCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 56899999999999998875421 122333333222 2588999999999997654 688887653
No 46
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=59.48 E-value=41 Score=31.58 Aligned_cols=65 Identities=11% Similarity=0.180 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
-+-|+-+||.++..|.+ +.++- ...+-...++.+.+ .++.++++++..++...+ +.+++++...+
T Consensus 182 ~~~Di~slG~~l~el~t~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 257 (260)
T cd05069 182 IKSDVWSFGILLTELVTKGRVPY-PGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFL 257 (260)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 47899999999999998 55431 11222223333332 367899999999997654 68888776654
No 47
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=58.13 E-value=40 Score=31.49 Aligned_cols=66 Identities=9% Similarity=0.101 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
.+-|+-+||.++..+++ +..+- ...+..+..+.+. ..++..++++|...+...+ +.++.++...+.
T Consensus 177 ~~~Di~slG~~l~~~~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~ 253 (257)
T cd05060 177 SKSDVWSYGVTLWEAFSYGAKPY-GEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFR 253 (257)
T ss_pred ccchHHHHHHHHHHHHcCCCCCc-ccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 57899999999999997 66542 1112222222222 2578999999999998654 689988876653
No 48
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=58.07 E-value=35 Score=31.90 Aligned_cols=66 Identities=18% Similarity=0.283 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhh-hccHHHHHHHHh---------hhcCHHHHHHHHHHhccC--CcCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQ-RENLQTSIDLMA---------RSYSADLRNLILYLLSVH--QKRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~-~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I 181 (487)
.+-|+-+||.++..|.++..+-.. ..+.......+. ..++.+++++|..++... .+.+++++..++
T Consensus 185 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~ 262 (267)
T cd08229 185 FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVA 262 (267)
T ss_pred chhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHH
Confidence 568999999999999998755211 111222222221 247899999999998754 478998876654
No 49
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=58.05 E-value=40 Score=32.40 Aligned_cols=66 Identities=8% Similarity=0.160 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
+.+-|+-+||.++..|+| +..+- ...+....++.+. ..++.++.+++...+...+ +.++.++..++
T Consensus 203 ~~~~Di~slG~il~el~t~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l 279 (291)
T cd05094 203 TTESDVWSFGVILWEIFTYGKQPW-FQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKIL 279 (291)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 357899999999999997 66541 1122222333222 2478899999999998654 68888876554
No 50
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=57.87 E-value=29 Score=31.57 Aligned_cols=65 Identities=14% Similarity=0.163 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH---------hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM---------ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~---------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
..+-|+-+||.+++.|.++..+-...++....+..+ ....+.+++++|..++...+ +.++.+++.
T Consensus 181 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 181 GRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 467899999999999999764421111111111111 12468999999999997654 678887653
No 51
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=57.80 E-value=31 Score=32.07 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccC--CcCCHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVH--QKRTVVDLMPM 180 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~ 180 (487)
.+-|+-+||.++..+.++..+.- ..+.......+. ..++.++++++..++... .+.++.+++..
T Consensus 180 ~~~Dv~slG~i~~~l~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 180 FKSDIWALGCVLYELLTLKRTFD-ATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred CcchhHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 46799999999999999865421 122222222221 247899999999999754 36888887653
No 52
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=57.58 E-value=24 Score=33.09 Aligned_cols=65 Identities=12% Similarity=0.135 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
-+-|+-+||.++..+.+ +..+-. ..+..+....+. ..++.+++++|..++...+ +.+++++...+
T Consensus 192 ~~~Dv~slG~il~ellt~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 267 (269)
T cd05044 192 TQSDVWSFGVLMWEILTLGQQPYP-ALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEIL 267 (269)
T ss_pred cchhHHHHHHHHHHHHHcCCCCCc-ccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHH
Confidence 46799999999999987 654311 111122222221 3578999999999997653 68888876554
No 53
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=57.50 E-value=41 Score=32.01 Aligned_cols=66 Identities=8% Similarity=0.163 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccC--CcCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVH--QKRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I 181 (487)
+.+-|+-+||.++..|.+ +..+ ....+..+-++.+. ..++.++.+++..++... .+.++.+++..+
T Consensus 199 ~~~~DiwslG~il~el~~~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l 275 (277)
T cd05036 199 TSKTDVWSFGVLLWEIFSLGYMP-YPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERI 275 (277)
T ss_pred CchhHHHHHHHHHHHHHcCCCCC-CCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHh
Confidence 367899999999999886 5443 11122222233332 247899999999999765 478999887654
No 54
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=57.38 E-value=32 Score=32.02 Aligned_cols=64 Identities=14% Similarity=0.212 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHH--------HhhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDL--------MARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~--------~~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..+.++..+-...+........ +...++.+++++|..++...+ +.++.+++.
T Consensus 186 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 186 RKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred chhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 6789999999999999987652111122211111 113589999999999997653 678888754
No 55
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=57.27 E-value=37 Score=31.90 Aligned_cols=66 Identities=12% Similarity=0.135 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHHHHHhcCC-chhhhhccHHHHHHHHh------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRS-LMAVQRENLQTSIDLMA------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~-~~a~~~~n~~~sl~~~~------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
+.+-|+-+||.++..|+++. ++.. ............ ...+.++++++..++...+ +.++++++..+
T Consensus 183 ~~~~DiwslG~~l~~l~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 183 SLAADKWSFGTTLWEIFSGGDKPLS-ALDSQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred CchhhHHHHHHHHHHHHcCCCCChh-hccHHHHHHHHHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 46789999999999999984 3211 111111111111 2467899999999998654 68998877654
No 56
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=57.20 E-value=27 Score=33.22 Aligned_cols=63 Identities=13% Similarity=0.249 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+-|+-+||.+++.|+++..+--............. ..|+.+++++|..++...+ +.++.+++
T Consensus 187 ~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 260 (282)
T cd06643 187 YKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLL 260 (282)
T ss_pred ccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 578999999999999998765211111122222111 2488999999999997654 67777654
No 57
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=57.05 E-value=36 Score=32.22 Aligned_cols=65 Identities=11% Similarity=0.146 Sum_probs=42.6
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchhhhhccHH---H--------------------------------HHHHHhhhcCHHH
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQ---T--------------------------------SIDLMARSYSADL 158 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~---~--------------------------------sl~~~~~~yS~dl 158 (487)
++.+-|+-+||.++..|.++.++-...+... + ........+|.++
T Consensus 177 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (283)
T cd07835 177 YSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDG 256 (283)
T ss_pred cCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHH
Confidence 3467999999999999999875311000000 0 1111234678999
Q ss_pred HHHHHHHhccCC--cCCHHHHH
Q psy1282 159 RNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 159 ~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.++|..++...+ +.++.+++
T Consensus 257 ~~li~~~l~~~P~~Rpt~~~il 278 (283)
T cd07835 257 LDLLSKMLVYDPAKRISAKAAL 278 (283)
T ss_pred HHHHHHHhcCChhhCcCHHHHh
Confidence 999999998664 57777764
No 58
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=56.83 E-value=29 Score=31.75 Aligned_cols=64 Identities=11% Similarity=0.235 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH-------hhhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM-------ARSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~-------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.++.|+-+||.++..|+++..+-....+...-.... ...++.++++++..++...+ +.++.+++
T Consensus 177 ~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l 249 (254)
T cd06627 177 STASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLL 249 (254)
T ss_pred CcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHh
Confidence 478999999999999999875421111111111111 12578999999999997664 57777654
No 59
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=56.79 E-value=30 Score=31.92 Aligned_cols=63 Identities=27% Similarity=0.466 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHH-HHHHHHh-------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQ-TSIDLMA-------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~-~sl~~~~-------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..|+++..+- ...+.. ....... ..++.++++++..++...+ +.++.+++.
T Consensus 180 ~~~Dv~slG~~l~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 180 QKSDIWALGCVLYELASLKRAF-EAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred cccchHHHHHHHHHHHhCCCCc-ccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 5789999999999999875432 112222 2222222 2478999999999997654 688888653
No 60
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=56.51 E-value=22 Score=33.22 Aligned_cols=72 Identities=17% Similarity=0.155 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH-----------hhhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM-----------ARSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~-----------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
..+-|+-+||.++..|.++..+-. ..+.....+.+ ...++.+++++|..++...+ +.+..++...+
T Consensus 171 ~~~~Dv~slG~il~~l~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 171 DKMSDWWSLGCVIFEFLFGYPPFH-AETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred cchhhhHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 467899999999999999876521 11222222211 12478999999999998664 34333333345
Q ss_pred HHHHHH
Q psy1282 182 GARYYT 187 (487)
Q Consensus 182 ~~r~~~ 187 (487)
...+|.
T Consensus 250 ~~~~~~ 255 (260)
T cd05611 250 SHPFFK 255 (260)
T ss_pred cChHhh
Confidence 555554
No 61
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=56.45 E-value=40 Score=31.44 Aligned_cols=66 Identities=12% Similarity=0.141 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
+.+-|+-+||.++.++.+ +..+- ...+..+-++.+. ..++.++++++..++...+ +.++.++...+
T Consensus 193 ~~~~Dv~SlG~il~el~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l 269 (273)
T cd05035 193 TSKSDVWAFGVTMWEIATRGQTPY-PGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVL 269 (273)
T ss_pred CcccchHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 467999999999999987 44331 1111122223222 2588999999999997653 68888876654
No 62
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=56.01 E-value=48 Score=32.36 Aligned_cols=63 Identities=17% Similarity=0.142 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH---------hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM---------ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~---------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..|+++..+-.. .+....+..+ ...+|..++++|..++...+ +.++.+++.
T Consensus 193 ~~~Di~slG~il~el~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 193 GKVDVWSLGITCIELAERKPPLFN-MNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred cccchHHHHHHHHHHHcCCCCCcc-ccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 357999999999999998754211 1111111111 12588999999999997553 678887654
No 63
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=56.00 E-value=31 Score=32.44 Aligned_cols=64 Identities=16% Similarity=0.215 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHH------------HhhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDL------------MARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~------------~~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.+++.|.++..+-...++.....+. +...++.+++++|..++...+ +.++++++.
T Consensus 191 ~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 191 AKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred ccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 4579999999999999987553212222222221 112468899999999997664 577777643
No 64
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=55.84 E-value=54 Score=30.99 Aligned_cols=67 Identities=13% Similarity=0.175 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
..+-|+-+||.++..|.+ +..+ ....+....++.+. ..++.++.+++..++...+ +.++.+++..+-
T Consensus 181 ~~~~DvwslG~~l~ellt~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 181 TIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258 (262)
T ss_pred CchhhHHHHHHHHHHHHcCCCCC-CCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 468999999999999998 4433 11111222222221 2478999999999997653 688888777653
No 65
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=55.71 E-value=60 Score=31.85 Aligned_cols=63 Identities=19% Similarity=0.186 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..|+++..+-.. .+....+..+. ..++..++++|..++...+ +.++.+++.
T Consensus 203 ~~~Dv~slGvil~el~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 276 (317)
T cd06635 203 GKVDVWSLGITCIELAERKPPLFN-MNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLK 276 (317)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHh
Confidence 456999999999999999865221 11111122111 2478899999999997553 688887654
No 66
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=55.60 E-value=43 Score=31.83 Aligned_cols=66 Identities=9% Similarity=0.090 Sum_probs=44.4
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.-+-|+-+||.++..|++ +..+- ...+....++.+. ..++.++++++.+++...+ +.++.++...+
T Consensus 204 ~~~~Dv~slG~il~el~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l 280 (283)
T cd05090 204 SSDSDIWSFGVVLWEIFSFGLQPY-YGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL 280 (283)
T ss_pred CchhhhHHHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHh
Confidence 357899999999999997 54331 1112222233322 2478999999999997654 68888876554
No 67
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=55.30 E-value=51 Score=29.03 Aligned_cols=65 Identities=15% Similarity=0.153 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHhcCCchhhhhcc----HHHHHHHHh----------hhcCH--HHHHHHHHHhccCC--cCCHHHHH
Q psy1282 117 QDDLTALGKLILAMTCRSLMAVQREN----LQTSIDLMA----------RSYSA--DLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 117 qeDl~~lG~LiLaLA~~~~~a~~~~n----~~~sl~~~~----------~~yS~--dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
+-|+-+||.++..|+++..+-..... +...+..+. ..++. +++++|...+...+ +.++.+++
T Consensus 84 ~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll 163 (176)
T smart00750 84 KADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYL 163 (176)
T ss_pred hhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHH
Confidence 57999999999999998765321111 111111111 12333 68889988887654 68888876
Q ss_pred HHH
Q psy1282 179 PMI 181 (487)
Q Consensus 179 ~~I 181 (487)
...
T Consensus 164 ~~~ 166 (176)
T smart00750 164 AHC 166 (176)
T ss_pred HHH
Confidence 554
No 68
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=55.25 E-value=39 Score=31.02 Aligned_cols=65 Identities=11% Similarity=0.203 Sum_probs=43.7
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPM 180 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~ 180 (487)
+.+-|+-+||.++..|.+ +..+ ....+....++.+. ..++.++++++..++...+ +.++.++...
T Consensus 182 ~~~~Di~slG~i~~~l~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 182 TSKSDVWSFGVLLWEIFTLGESP-YPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred CcchhHHHHHHHHHHHHhCCCCC-CCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 467899999999999987 4332 11122222222222 2478999999999998664 6888877543
No 69
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=55.13 E-value=52 Score=30.61 Aligned_cols=66 Identities=12% Similarity=0.176 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccC--CcCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVH--QKRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I 181 (487)
+.+-|+-+||.++..|++ +..+- ...+....++.+. ..+++++.+++..++... .+.++.++...+
T Consensus 182 ~~~~DiwslG~~l~~l~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L 258 (261)
T cd05148 182 STKSDVWSFGILLYEMFTYGQVPY-PGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREEL 258 (261)
T ss_pred CchhhHHHHHHHHHHHHcCCCCCC-CcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 357899999999999997 44431 1122222222222 247899999999999755 368888876544
No 70
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=55.03 E-value=36 Score=32.17 Aligned_cols=64 Identities=13% Similarity=0.203 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh--------hh-cCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA--------RS-YSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~--------~~-yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
+.+-|+-+||.+++.+.++..+-.. .+....+..+. .. |+.++.+++..++...+ +.++.+++.
T Consensus 176 ~~~sDv~slG~il~~l~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 176 DEKADIWSLGITAIELAKGEPPLSD-LHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred CchhhHHHHHHHHHHHHhCCCCccc-CchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3689999999999999998765211 11111111111 12 89999999999997653 678877643
No 71
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=54.90 E-value=45 Score=32.21 Aligned_cols=63 Identities=16% Similarity=0.183 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHH-------------------------------------HHHHHhhhcCHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQT-------------------------------------SIDLMARSYSAD 157 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~-------------------------------------sl~~~~~~yS~d 157 (487)
..+-|+-+||.++..|+++.++-- ..+... .+......+|++
T Consensus 183 ~~~~Dv~slG~~l~el~tg~~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (301)
T cd07873 183 STQIDMWGVGCIFYEMSTGRPLFP-GSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSD 261 (301)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHH
Confidence 357899999999999999875411 011110 111122357889
Q ss_pred HHHHHHHHhccCC--cCCHHHHH
Q psy1282 158 LRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 158 l~~~i~~Lls~~~--~k~i~~l~ 178 (487)
++++|..++...+ +.++.+++
T Consensus 262 ~~~li~~ml~~dp~~R~t~~eil 284 (301)
T cd07873 262 GAELLSKLLQFEGRKRISAEEAM 284 (301)
T ss_pred HHHHHHHHhcCCcccCcCHHHHh
Confidence 9999999998764 57777754
No 72
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=54.71 E-value=50 Score=35.69 Aligned_cols=65 Identities=20% Similarity=0.308 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH--------hhhcCHHHHHHHHHHhccCC--cCCHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM--------ARSYSADLRNLILYLLSVHQ--KRTVVDLMPM 180 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~--------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~ 180 (487)
+.+-|+-+||.++..|.++..+- ...+....+..+ ...+++++++++..++...+ +.+..+++..
T Consensus 223 s~k~DVwSlGvilyeLltG~~Pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 223 SKKADMFSLGVLLYELLTLKRPF-DGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CcHHHHHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 36799999999999999987542 123333333322 23589999999999998764 6888887543
No 73
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=54.29 E-value=49 Score=30.82 Aligned_cols=65 Identities=12% Similarity=0.136 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+.|+-+||.++..|.+ +..+- ...+.....+.+. ..++.++++++..++...+ +.+++++...+
T Consensus 176 ~~~Dv~slG~~l~el~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 251 (254)
T cd05083 176 SKSDVWSYGVLLWEVFSYGRAPY-PKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKL 251 (254)
T ss_pred chhhHHHHHHHHHHHHhCCCCCC-ccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 67899999999999986 55431 1122233333332 2478899999999998654 68888876554
No 74
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=54.22 E-value=53 Score=31.05 Aligned_cols=65 Identities=11% Similarity=0.127 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+-|+-+||.++.+|.+ +..+ ....+.....+.+. ..++.++.+++...++..+ +.++.++...+
T Consensus 205 ~~sDv~slG~il~el~~~g~~p-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l 280 (283)
T cd05048 205 TESDIWSFGVVLWEIFSYGLQP-YYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRL 280 (283)
T ss_pred hhhhHHHHHHHHHHHHcCCCCC-CCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 67899999999999986 5432 11112222222222 3589999999999998764 68998876654
No 75
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=54.05 E-value=51 Score=31.62 Aligned_cols=66 Identities=11% Similarity=0.196 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
..+-|+-+||.++..|++ +..+-. ..+....++.+. +.++.++++++.-++...+ +.++.++...+
T Consensus 200 ~~~sDiwslG~il~~l~t~g~~p~~-~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l 276 (288)
T cd05093 200 TTESDVWSLGVVLWEIFTYGKQPWY-QLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLL 276 (288)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 467999999999999998 554311 112222222222 3588999999999998654 68888864443
No 76
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=53.92 E-value=49 Score=31.96 Aligned_cols=65 Identities=8% Similarity=0.106 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
-+-|+-+||.++..|++ +..+ ....+.....+.+. ..+|.++++++..++...+ +.++++++..+
T Consensus 197 ~~~DvwSlG~il~el~t~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 272 (297)
T cd05089 197 TKSDVWSFGVLLWEIVSLGGTP-YCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQL 272 (297)
T ss_pred chhhHHHHHHHHHHHHcCCCCC-CCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 57899999999999986 6543 11122222222222 2588999999999997764 68888865443
No 77
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=53.79 E-value=53 Score=31.13 Aligned_cols=66 Identities=9% Similarity=0.155 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
+.+-|+-+||.++..|++ +..+ ....+....++.+. ...+.++++++..++...+ +.++.+++.++
T Consensus 199 ~~~~Di~slG~~l~el~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l 275 (277)
T cd05062 199 TTYSDVWSFGVVLWEIATLAEQP-YQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 275 (277)
T ss_pred CchhHHHHHHHHHHHHHcCCCCC-CCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHh
Confidence 357899999999999998 3432 21223333333322 2467889999999997654 68998887654
No 78
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=53.73 E-value=33 Score=31.02 Aligned_cols=63 Identities=14% Similarity=0.194 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh----------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA----------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
+++-|+-+||.+++.++++..+-- ..+....+.... ..|+.++.++|..++...+ +.++.+++
T Consensus 175 ~~~~Dv~slG~il~~l~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l 249 (253)
T cd05122 175 DYKADIWSLGITAIELAEGKPPYS-ELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLL 249 (253)
T ss_pred CccccHHHHHHHHHHHHhCCCCCC-CCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 477999999999999999875421 111222222222 1248999999999998654 67887765
No 79
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=53.34 E-value=32 Score=31.71 Aligned_cols=63 Identities=21% Similarity=0.183 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH--------hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM--------ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~--------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..|+++..+-. ..+....+..+ ...|+.++++++..++...+ +.+..+++.
T Consensus 180 ~~~Di~slG~il~~l~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 180 EKSDVWALGVVLYECCTGKHPFD-ANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CccchHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 57899999999999999875521 12222211111 12678999999999997553 577776543
No 80
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=52.61 E-value=45 Score=31.38 Aligned_cols=66 Identities=18% Similarity=0.148 Sum_probs=42.7
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCchhhhhccHH------------------------------------HHHHHHhhhcCH
Q psy1282 113 YHDLQDDLTALGKLILAMTCRSLMAVQRENLQ------------------------------------TSIDLMARSYSA 156 (487)
Q Consensus 113 yh~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~------------------------------------~sl~~~~~~yS~ 156 (487)
+...+-|+-+||.+++.|+++.++-. ..+.. ..+......+|.
T Consensus 175 ~~~~~~Di~slGv~l~el~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (282)
T cd07831 175 YYGPKMDIWAVGCVFFEILSLFPLFP-GTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASA 253 (282)
T ss_pred CCCcchhHHHHHHHHHHHHcCCcCCC-CCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccH
Confidence 34568999999999999998754311 01110 011122235788
Q ss_pred HHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 157 DLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 157 dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
+++++|.-++...+ +.++.+++.
T Consensus 254 ~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 254 EGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred HHHHHHHHHhccCcccccCHHHHhh
Confidence 99999999998664 677777643
No 81
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=52.59 E-value=57 Score=30.62 Aligned_cols=66 Identities=11% Similarity=0.076 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
+.+-|+-+||.++.+|++ +..+- ...+...-...+. ..++.++.+++...++..+ +.++.+++..+
T Consensus 193 ~~~sDi~slG~il~el~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l 269 (273)
T cd05074 193 TTHSDVWAFGVTMWEIMTRGQTPY-AGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQL 269 (273)
T ss_pred chhhhhHHHHHHHHHHhhCCCCCC-CCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 467899999999999998 44331 1111111111111 2477899999999997654 68888876655
No 82
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=52.46 E-value=62 Score=30.62 Aligned_cols=68 Identities=7% Similarity=0.091 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIGA 183 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~~ 183 (487)
..+-|+-+||.++..+++ +..+- ...+...-...+. ..+++++++++...+...+ +.+..++...+..
T Consensus 197 ~~~~Di~slG~~l~el~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 275 (280)
T cd05043 197 SSASDVWSFGVLLWELMTLGQTPY-VEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTD 275 (280)
T ss_pred CchhhHHHhHHHHHHHhcCCCCCc-CcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 467999999999999997 65432 1112222122222 2467899999999997653 6899888766543
No 83
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=52.44 E-value=54 Score=30.87 Aligned_cols=65 Identities=9% Similarity=0.164 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+-|+-+||.++.++.+ +..+-. ..+....++.+. ..++.++++++.-++...+ +.++.+++..+
T Consensus 203 ~~~Di~slG~il~e~~~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l 278 (280)
T cd05049 203 TESDVWSFGVVLWEIFTYGKQPWY-GLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERL 278 (280)
T ss_pred hhhhHHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHh
Confidence 56899999999999997 665421 112222233322 2578999999999997654 68999887665
No 84
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=52.19 E-value=63 Score=29.99 Aligned_cols=66 Identities=8% Similarity=0.070 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
..+-|+-+||.++..+.+ +..+-. ..+.......+. ..++.++++++..++...+ +.+++++..++
T Consensus 174 ~~~~Dv~slG~il~e~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 250 (252)
T cd05084 174 SSESDVWSFGILLWEAFSLGAVPYA-NLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250 (252)
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCcc-ccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 356899999999999886 554321 111112222221 2478999999999997653 78999887654
No 85
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=51.48 E-value=42 Score=31.64 Aligned_cols=64 Identities=9% Similarity=0.104 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHH-------------------------------------HHHHhhhcCHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTS-------------------------------------IDLMARSYSADL 158 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~s-------------------------------------l~~~~~~yS~dl 158 (487)
.+-|+-+||.++..|+++..+-....+.... ++.....+|.++
T Consensus 180 ~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (286)
T cd07847 180 PPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPA 259 (286)
T ss_pred chhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHH
Confidence 5789999999999999987531100111100 011123568889
Q ss_pred HHHHHHHhccCC--cCCHHHHHH
Q psy1282 159 RNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 159 ~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
+++|..++...+ +.++.+++.
T Consensus 260 ~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 260 LSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HHHHHHHhcCCccccCCHHHHhc
Confidence 999999997553 678877643
No 86
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=51.32 E-value=36 Score=32.44 Aligned_cols=62 Identities=16% Similarity=0.258 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh----------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA----------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+.|+-+||.+++.|+++..+-. ..+....+..+. ..++.+++++|..+++..+ +.+..+++
T Consensus 195 ~~~Dv~slGvil~~l~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il 268 (286)
T cd06614 195 PKVDIWSLGIMCIEMAEGEPPYL-REPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELL 268 (286)
T ss_pred CccccHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 56899999999999999875421 111111111111 1378999999999998765 57777653
No 87
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=51.08 E-value=57 Score=30.42 Aligned_cols=65 Identities=9% Similarity=0.148 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPM 180 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~ 180 (487)
+++-|+-+||.++..|++ +.++- ...+.......+. ..++.++++++..++...+ +.++.++...
T Consensus 177 ~~~~Dv~slG~i~~~l~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 177 STKSDVWSFGILLWEIYSFGRVPY-PRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred CchhhhHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 367999999999999997 55432 1123333333332 2467899999999997653 6888886544
No 88
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=51.00 E-value=48 Score=30.96 Aligned_cols=62 Identities=16% Similarity=0.387 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH--------hhhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM--------ARSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~--------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+.|+-+||.++..|+++..+- ...+..+....+ ...++.++.++|..++...+ +.++.+++
T Consensus 184 ~~~Dv~slG~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 255 (260)
T cd08222 184 SKSDIWSLGCILYEMCCLAHAF-EGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEIL 255 (260)
T ss_pred chhhHHHHHHHHHHHHhCCCCC-CCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 4689999999999999987542 111222212221 12588999999999997654 57777764
No 89
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=50.86 E-value=51 Score=31.01 Aligned_cols=65 Identities=11% Similarity=0.197 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+-|+-+||.++..|++ +..+- ...+..+.++.+. ..++.++++++..++...+ +.++.+++..+
T Consensus 200 ~~~Di~slG~il~el~t~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 275 (277)
T cd05032 200 TKSDVWSFGVVLWEMATLAEQPY-QGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSL 275 (277)
T ss_pred cccchHHHHHHHHHhhccCCCCC-ccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHh
Confidence 56799999999999998 55431 1112222233332 2478999999999998654 68998876654
No 90
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=50.51 E-value=51 Score=31.42 Aligned_cols=66 Identities=14% Similarity=0.123 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHHHHHhcC--CchhhhhccHHHHHHHHh---------------hhcCHHHHHHHHHHhccC--CcCCHH
Q psy1282 115 DLQDDLTALGKLILAMTCR--SLMAVQRENLQTSIDLMA---------------RSYSADLRNLILYLLSVH--QKRTVV 175 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~--~~~a~~~~n~~~sl~~~~---------------~~yS~dl~~~i~~Lls~~--~~k~i~ 175 (487)
..+-|+-+||.++..|++. ..+... .+....++.+. ..++.++++++..++... .+.++.
T Consensus 210 ~~~~Dv~slG~~l~el~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~ 288 (296)
T cd05051 210 TTKSDVWAFGVTLWEILTLCREQPYEH-LTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFR 288 (296)
T ss_pred CccchhhhhHHHHHHHHhcCCCCCCCC-cChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHH
Confidence 4568999999999999873 222111 11111111111 246799999999999765 378999
Q ss_pred HHHHHH
Q psy1282 176 DLMPMI 181 (487)
Q Consensus 176 ~l~~~I 181 (487)
++.+.+
T Consensus 289 el~~~L 294 (296)
T cd05051 289 EIHLFL 294 (296)
T ss_pred HHHHHh
Confidence 887655
No 91
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=50.49 E-value=69 Score=31.28 Aligned_cols=67 Identities=13% Similarity=0.218 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHH-HHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQT-SIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIGA 183 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~-sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~~ 183 (487)
.+-|+-+||.++..+++ +..+- ...+... ..+.+. ...+.++++++..+++..+ +.++.+++..+..
T Consensus 222 ~~~DiwslGvil~el~t~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 222 FESDVWSYGILLWEIFSLGSNPY-PGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred cHhHHHHHHHHHHHHHhCCCCCc-CCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 46899999999999987 54431 1111111 111221 1468999999999997653 7999998877653
No 92
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=50.18 E-value=65 Score=30.30 Aligned_cols=64 Identities=14% Similarity=0.180 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPM 180 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~ 180 (487)
.+-|+-+||.++..|.+ +..+- ...+.....+.+. ..+|.++++++...+...+ ++++.+++..
T Consensus 180 ~~~Di~slG~~l~~l~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 180 SKSDVWAFGVLMWEVYSLGKMPY-ERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred chhHHHHHHHHHHHHhcCCCCCc-CcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 56899999999999987 55431 1112222222222 2478999999999997653 7899887654
No 93
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=50.08 E-value=56 Score=30.93 Aligned_cols=64 Identities=14% Similarity=0.210 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHH-----------------------------------HHHHHHhhhcCHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQ-----------------------------------TSIDLMARSYSADLR 159 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~-----------------------------------~sl~~~~~~yS~dl~ 159 (487)
+.+-|+-+||.+++.|.++..+-...+... +.++.+...++.+++
T Consensus 179 ~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (284)
T cd07860 179 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGR 258 (284)
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHH
Confidence 457999999999999999864311100000 111122235788999
Q ss_pred HHHHHHhccCC--cCCHHHHH
Q psy1282 160 NLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 160 ~~i~~Lls~~~--~k~i~~l~ 178 (487)
++|.-++...+ +.++.+++
T Consensus 259 ~li~~~l~~~P~~Rpt~~~~l 279 (284)
T cd07860 259 DLLSQMLHYDPNKRISAKAAL 279 (284)
T ss_pred HHHHHhcCCCcccCCCHHHHh
Confidence 99999997543 67777764
No 94
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=49.64 E-value=53 Score=30.74 Aligned_cols=64 Identities=16% Similarity=0.244 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHH---------HHhhhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSID---------LMARSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~---------~~~~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
..+-|+-+||.++..|+++..+-...++...... .+...|+.+++++|..++...+ +.++.+++
T Consensus 186 ~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l 260 (265)
T cd06631 186 GRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLL 260 (265)
T ss_pred cchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 3679999999999999998865321122211111 1223589999999999997653 67777654
No 95
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=49.18 E-value=67 Score=31.05 Aligned_cols=66 Identities=12% Similarity=0.123 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
..+-|+-+||.+++.|++ +..+ ....+...-.+.+. ..++.+++++|.-.+.+.+ +.++.+++..+
T Consensus 217 ~~~~Di~slG~~l~el~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l 293 (304)
T cd05101 217 THQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDL 293 (304)
T ss_pred CchhhHHHHHHHHHHHHcCCCCC-cccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence 367899999999999987 4332 11112233233332 2468999999999997653 68888887765
No 96
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=48.91 E-value=47 Score=33.98 Aligned_cols=67 Identities=9% Similarity=0.122 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
.+-|+-+||.+++.+.+ +..+-............+.. ..+.++++++..++...+ +.++.+++.++-
T Consensus 295 ~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~ 372 (375)
T cd05104 295 FESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIE 372 (375)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 56799999999999886 54331111111122222222 357899999999998764 689998876653
No 97
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=48.82 E-value=96 Score=30.14 Aligned_cols=67 Identities=12% Similarity=0.122 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIGA 183 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~~ 183 (487)
-+.|+-+||.++..|++ +..+- ...+.....+.+. ...+.+++++|..++...+ +.++.+++..+-.
T Consensus 221 ~~~DvwslG~~l~el~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~ 298 (307)
T cd05098 221 HQSDVWSFGVLLWEIFTLGGSPY-PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 298 (307)
T ss_pred cHHHHHHHHHHHHHHHcCCCCCC-CcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 56899999999999987 44331 1122222222222 1367899999999997653 6888887666533
No 98
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=48.64 E-value=54 Score=32.30 Aligned_cols=65 Identities=11% Similarity=0.175 Sum_probs=42.0
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchhhhhccHH---HH-------------------------------HHHHhhhcCHHHH
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQ---TS-------------------------------IDLMARSYSADLR 159 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~---~s-------------------------------l~~~~~~yS~dl~ 159 (487)
.+.+-|+-+||.+++.|+++.++-...++.. .. ...+...+|.++.
T Consensus 211 ~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (335)
T PTZ00024 211 YHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAI 290 (335)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHH
Confidence 3578999999999999999865321111111 00 1111235688999
Q ss_pred HHHHHHhccCC--cCCHHHHH
Q psy1282 160 NLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 160 ~~i~~Lls~~~--~k~i~~l~ 178 (487)
++|.-++...+ +.++++++
T Consensus 291 ~li~~~l~~~P~~R~s~~~~l 311 (335)
T PTZ00024 291 DLLQSLLKLNPLERISAKEAL 311 (335)
T ss_pred HHHHHHcCCCchhccCHHHHh
Confidence 99999997654 57777764
No 99
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=48.32 E-value=40 Score=31.93 Aligned_cols=64 Identities=13% Similarity=0.160 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH--------hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM--------ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~--------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..|.++..+-............. ...||.+++++|...++..+ +.+..+++.
T Consensus 205 ~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 205 YRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred cccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 46799999999999999976521111111111111 12489999999999997654 688887653
No 100
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=48.21 E-value=54 Score=31.19 Aligned_cols=63 Identities=13% Similarity=0.116 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHH--HH------------------------------------HHhhhcCHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTS--ID------------------------------------LMARSYSAD 157 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~s--l~------------------------------------~~~~~yS~d 157 (487)
.+-|+-+||.++..|+++.++-....+.... +. .....+|.+
T Consensus 180 ~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 259 (287)
T cd07848 180 KAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGV 259 (287)
T ss_pred CchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHH
Confidence 4679999999999999987541100011100 00 001236888
Q ss_pred HHHHHHHHhccCC--cCCHHHHH
Q psy1282 158 LRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 158 l~~~i~~Lls~~~--~k~i~~l~ 178 (487)
++++|..++...+ +.++.+++
T Consensus 260 ~~dll~~~L~~~P~~R~s~~~~l 282 (287)
T cd07848 260 LLDLMKNLLKLNPTDRYLTEQCL 282 (287)
T ss_pred HHHHHHHHccCCcccCCCHHHHh
Confidence 9999999998765 57777764
No 101
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=48.19 E-value=79 Score=29.41 Aligned_cols=66 Identities=14% Similarity=0.228 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
+.+-|+-+||.+++.|.+ +..+- ...+....++.+.+ .++.++++++..++...+ +.+.+++...+
T Consensus 182 ~~~~Di~slG~il~~l~t~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l 258 (261)
T cd05034 182 TIKSDVWSFGILLTEIVTYGRVPY-PGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFL 258 (261)
T ss_pred CchhHHHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHH
Confidence 367899999999999998 65442 11122233333332 256899999999997664 67888765443
No 102
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=48.18 E-value=54 Score=30.25 Aligned_cols=63 Identities=21% Similarity=0.320 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.+++.+.++..+-. ..+..+.+.... ..++.+++++|..++...+ +.++++++.
T Consensus 181 ~~~Dv~slG~il~~l~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 181 NKTDIWSLGCVLYELCTLKHPFE-GNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred chhhHHHHHHHHHHHHhCCCCCC-CccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 57899999999999998875521 122222222211 2478899999999997553 678887643
No 103
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=48.14 E-value=52 Score=32.42 Aligned_cols=68 Identities=12% Similarity=0.148 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
..+-|+-+||.++..+.+ +..+--...........+. ..+++++++++..++...+ +.++.+++..+.
T Consensus 254 ~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~ 332 (338)
T cd05102 254 TTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILG 332 (338)
T ss_pred CcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 356799999999999875 5443110001111111221 2578999999999998664 689998877654
No 104
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=48.12 E-value=47 Score=31.98 Aligned_cols=63 Identities=11% Similarity=0.212 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh----------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA----------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+-|+-+||.++..|.++..+-.........+..+. ..|+.++++++..++...+ ++++++++
T Consensus 197 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il 271 (296)
T cd06618 197 IRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELL 271 (296)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 467999999999999998765211001111121111 1378999999999997654 68887764
No 105
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=48.01 E-value=66 Score=30.17 Aligned_cols=64 Identities=11% Similarity=0.167 Sum_probs=41.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHH---H---------------------------------HHHHHhhhcCHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQ---T---------------------------------SIDLMARSYSADL 158 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~---~---------------------------------sl~~~~~~yS~dl 158 (487)
..+-|+-+||.+++.|+++..+-...++.. . .+..+...+|.++
T Consensus 177 ~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (283)
T cd05118 177 STPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQA 256 (283)
T ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHH
Confidence 367899999999999999864311111111 0 0111233578899
Q ss_pred HHHHHHHhccCC--cCCHHHHH
Q psy1282 159 RNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 159 ~~~i~~Lls~~~--~k~i~~l~ 178 (487)
+++|..++...+ +.++.+++
T Consensus 257 ~~~i~~~l~~~P~~Rp~~~~ll 278 (283)
T cd05118 257 LDLLSQMLHYDPHKRITAEQAL 278 (283)
T ss_pred HHHHHHHhccCcccCcCHHHHh
Confidence 999999997653 67777754
No 106
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=48.00 E-value=68 Score=29.66 Aligned_cols=65 Identities=9% Similarity=0.120 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+-|+-+||.++..|.+ +..+- ...+.....+.+. ..++.++.+++..++...+ +.++.+++..+
T Consensus 174 ~~~Di~slG~i~~~l~t~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l 249 (251)
T cd05041 174 SESDVWSYGILLWETFSLGDTPY-PGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNEL 249 (251)
T ss_pred cchhHHHHHHHHHHHHhccCCCC-ccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHh
Confidence 56799999999999998 44321 1111122122221 2467899999999996553 68888876544
No 107
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=47.95 E-value=1.4e+02 Score=31.81 Aligned_cols=63 Identities=16% Similarity=0.174 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..|.++..+-. ..+....+..+. ..+|.+++++|..++...+ +.+..+++.
T Consensus 250 ~~~Dv~slG~~l~el~tg~~Pf~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 250 KKADMWSLGVILYELLTLHRPFK-GPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred cHHhHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 56899999999999999875421 112222222221 2578999999999998764 688877654
No 108
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=47.65 E-value=66 Score=31.17 Aligned_cols=22 Identities=14% Similarity=0.092 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
...-|+-+||.++..|++|..+
T Consensus 182 ~~~~DiwslG~il~~l~~g~~p 203 (303)
T cd07869 182 STCLDMWGVGCIFVEMIQGVAA 203 (303)
T ss_pred CcHHHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999998654
No 109
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=47.48 E-value=59 Score=31.12 Aligned_cols=71 Identities=13% Similarity=0.176 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhcc---HHHHH--------------------------------HHHhhhcCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQREN---LQTSI--------------------------------DLMARSYSADLRN 160 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n---~~~sl--------------------------------~~~~~~yS~dl~~ 160 (487)
.+-|+-+||.+++.|+++..+--..+. +.+.+ ......+|.++++
T Consensus 183 ~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (294)
T PLN00009 183 TPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVD 262 (294)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHH
Confidence 468999999999999998654210011 11111 1112357899999
Q ss_pred HHHHHhccCC--cCCHHHHHHHHHHHHHHHH
Q psy1282 161 LILYLLSVHQ--KRTVVDLMPMIGARYYTQL 189 (487)
Q Consensus 161 ~i~~Lls~~~--~k~i~~l~~~I~~r~~~~~ 189 (487)
+|..++...+ +.++.+++. ..+|..+
T Consensus 263 ~i~~~l~~~P~~Rps~~~~l~---~~~~~~~ 290 (294)
T PLN00009 263 LLSKMLRLDPSKRITARAALE---HEYFKDL 290 (294)
T ss_pred HHHHHccCChhhCcCHHHHhc---CchHhHH
Confidence 9999997654 577776543 3444443
No 110
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=47.25 E-value=48 Score=31.42 Aligned_cols=63 Identities=11% Similarity=0.258 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+-|+-+||.++..++++.++-...+.......... ..+|.++.++|..++...+ +.++.+++
T Consensus 187 ~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 260 (280)
T cd06611 187 YKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELL 260 (280)
T ss_pred ccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 468999999999999999765321111111111111 2478999999999997654 67887653
No 111
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=47.21 E-value=41 Score=32.54 Aligned_cols=71 Identities=11% Similarity=0.216 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHH----------------------------------------HHhhhcC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSID----------------------------------------LMARSYS 155 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~----------------------------------------~~~~~yS 155 (487)
..-|+-+||.+++.++++..+-....+....++ ...+.+|
T Consensus 189 ~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (314)
T cd08216 189 EKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFS 268 (314)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHH
Confidence 458999999999999988654211011111111 1123567
Q ss_pred HHHHHHHHHHhccC--CcCCHHHHHHHHHHHHHHHH
Q psy1282 156 ADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQL 189 (487)
Q Consensus 156 ~dl~~~i~~Lls~~--~~k~i~~l~~~I~~r~~~~~ 189 (487)
.++++++..++... .+.++++++. ..+|..+
T Consensus 269 ~~~~~li~~~l~~~P~~Rpt~~~ll~---~p~~~~~ 301 (314)
T cd08216 269 EHFHQFVELCLQRDPESRPSASQLLN---HSFFKQC 301 (314)
T ss_pred HHHHHHHHHHhhcCCCcCcCHHHHhc---CchHhhh
Confidence 89999999998654 3688887643 4444433
No 112
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=47.05 E-value=78 Score=30.37 Aligned_cols=65 Identities=9% Similarity=0.218 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHHHHHhcC-CchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCR-SLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~-~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+.|+-+||.++..+++. ..+ ....+..+.++.+. ...+.++++++..++...+ +.++.+++..+
T Consensus 200 ~~~DvwslG~~l~el~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l 275 (288)
T cd05061 200 TSSDMWSFGVVLWEITSLAEQP-YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 275 (288)
T ss_pred hHhHHHHHHHHHHHHHhCCCCC-CCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 578999999999999973 332 11112233333322 1357899999999998764 67888765544
No 113
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=46.68 E-value=62 Score=30.87 Aligned_cols=65 Identities=9% Similarity=0.150 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
-+-|+-+||.++..|.+ +.++-.. .+....++.+. ..++++++++|..++...+ +.+++++...+
T Consensus 203 ~~~Di~slG~il~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l 278 (280)
T cd05092 203 TESDIWSFGVVLWEIFTYGKQPWYQ-LSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRL 278 (280)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCcc-CCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 56799999999999987 6554211 11111122221 3578999999999997553 78998876654
No 114
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=46.66 E-value=40 Score=31.23 Aligned_cols=64 Identities=16% Similarity=0.288 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh------------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA------------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~------------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
..+.|+-+||.+++.|+++..+--.......-.+.+. ..+++++++++...+...+ +.++.+++
T Consensus 185 ~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll 262 (267)
T cd06610 185 DFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELL 262 (267)
T ss_pred CcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 3567999999999999998764211111111111111 2578899999999887543 67777764
No 115
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=46.57 E-value=69 Score=29.91 Aligned_cols=65 Identities=12% Similarity=0.224 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
-+-|+-+||-++..|.+ +..+- ...+..+.++.+.+ .++.++++++...+...+ +.++.+++..+
T Consensus 180 ~~~Di~s~G~~l~el~~~g~~p~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 180 SKSDVWSFGVLMWEVFTEGKMPF-EKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred hhhhhHHHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 57899999999999998 55432 12233333333332 367889999999997664 68998887654
No 116
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=46.48 E-value=84 Score=29.36 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhh-hccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQ-RENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~-~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+.|+-+||.++..|+++..+-.. ..+.....+.+. ..++.++++++...+...+ +.++.++...+
T Consensus 185 ~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~ 262 (267)
T cd08228 185 FKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIA 262 (267)
T ss_pred chhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHH
Confidence 568999999999999988754211 111122222221 2578899999999997653 68998876543
No 117
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=46.43 E-value=62 Score=31.37 Aligned_cols=64 Identities=14% Similarity=0.109 Sum_probs=41.3
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHH-------------------------------------HHhhhcCH
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSID-------------------------------------LMARSYSA 156 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~-------------------------------------~~~~~yS~ 156 (487)
+..+-|+-+||.++..|+++.++-.. .+....+. .....+|.
T Consensus 186 ~~~~~DvwslG~il~el~~g~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (309)
T cd07845 186 YTTAIDMWAVGCILAELLAHKPLLPG-KSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSE 264 (309)
T ss_pred cCchHHHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCH
Confidence 35789999999999999998753211 11111111 01123688
Q ss_pred HHHHHHHHHhccCC--cCCHHHHH
Q psy1282 157 DLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 157 dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
+++++|..++...+ +.++++++
T Consensus 265 ~~~~li~~ml~~dp~~R~t~~~il 288 (309)
T cd07845 265 AGLRLLNFLLMYDPKKRATAEEAL 288 (309)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHh
Confidence 99999999998664 57777654
No 118
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=45.93 E-value=31 Score=33.45 Aligned_cols=72 Identities=14% Similarity=0.170 Sum_probs=44.8
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh----------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA----------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
+..+-|+-+||.+++.|+++..+-. ..+..+.+.... ..++.+++++|..++...+ +.+..+...++
T Consensus 193 ~~~~~Di~slG~vl~el~~g~~pf~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 193 YGKPVDWWAMGIILYEFLVGCVPFF-GDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 3477899999999999999876522 112222222221 1478999999999998764 44433333334
Q ss_pred HHHHH
Q psy1282 182 GARYY 186 (487)
Q Consensus 182 ~~r~~ 186 (487)
...++
T Consensus 272 ~~~~~ 276 (305)
T cd05609 272 QHRFF 276 (305)
T ss_pred hCccc
Confidence 44443
No 119
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=45.33 E-value=59 Score=32.44 Aligned_cols=64 Identities=8% Similarity=0.140 Sum_probs=41.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHH---HHHH----------------------------------HHhhhcCHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQ---TSID----------------------------------LMARSYSAD 157 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~---~sl~----------------------------------~~~~~yS~d 157 (487)
..+.|+-+||.++..|+++..+-...++.. .-++ .+...+|++
T Consensus 194 ~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 273 (343)
T cd07851 194 NQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPL 273 (343)
T ss_pred CchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHH
Confidence 468999999999999999875311111110 0000 111247999
Q ss_pred HHHHHHHHhccCC--cCCHHHHH
Q psy1282 158 LRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 158 l~~~i~~Lls~~~--~k~i~~l~ 178 (487)
++++|..++...+ +.++.+++
T Consensus 274 l~dli~~~l~~~P~~Rpt~~ell 296 (343)
T cd07851 274 AIDLLEKMLVLDPDKRITAAEAL 296 (343)
T ss_pred HHHHHHHhCCCChhhCCCHHHHh
Confidence 9999999997654 57887764
No 120
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=45.23 E-value=50 Score=32.27 Aligned_cols=21 Identities=24% Similarity=0.340 Sum_probs=18.4
Q ss_pred hHHHHHHHHHHHHHHhcCCch
Q psy1282 116 LQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~ 136 (487)
.+.|+-+||.++++++++..+
T Consensus 177 ~~~DiwslG~~l~~l~~g~~p 197 (308)
T cd06615 177 VQSDIWSLGLSLVEMAIGRYP 197 (308)
T ss_pred ccchHHHHHHHHHHHHhCCCC
Confidence 568999999999999998754
No 121
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=45.19 E-value=73 Score=30.10 Aligned_cols=69 Identities=4% Similarity=0.042 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccC--CcCCHHHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVH--QKRTVVDLMPMIGA 183 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I~~ 183 (487)
+.+-|+-+||.++..|.+ +..+- ...+....+..+.+ .++.++++++.-.+... .+.++.++...|..
T Consensus 176 ~~~~Di~slG~~l~el~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 176 SSRSDVWSYGITMWEAFSYGQKPY-KKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CchhhHHHHHHHHHHHhcCCCCCc-CcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 357899999999999875 65431 11122233333332 46899999999888755 36888888776654
Q ss_pred H
Q psy1282 184 R 184 (487)
Q Consensus 184 r 184 (487)
-
T Consensus 255 ~ 255 (257)
T cd05115 255 Y 255 (257)
T ss_pred h
Confidence 3
No 122
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=44.68 E-value=68 Score=32.10 Aligned_cols=23 Identities=13% Similarity=0.150 Sum_probs=19.7
Q ss_pred hhhHHHHHHHHHHHHHHhcCCch
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
..++-|+-+||.++..|.++..+
T Consensus 193 ~~~~~Di~slG~ll~~l~~g~~p 215 (343)
T cd07880 193 YTQTVDIWSVGCIMAEMLTGKPL 215 (343)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCC
Confidence 35789999999999999998754
No 123
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=44.58 E-value=70 Score=32.76 Aligned_cols=67 Identities=9% Similarity=0.080 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
.+.|+-+||.++..|++ +..+--....-......+. ..++.++++++..++...+ +.++.++..++-
T Consensus 293 ~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~ 370 (374)
T cd05106 293 VQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQ 370 (374)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 57899999999999985 6543211001111111221 1358999999999998654 689999877653
No 124
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=43.89 E-value=88 Score=30.56 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+.|+-+||.++..+++ +..+ ....+.....+.+.. .++.+++++|..++...+ +.++.+++..+
T Consensus 215 ~~~DiwslG~~l~el~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 290 (314)
T cd05099 215 HQSDVWSFGILMWEIFTLGGSP-YPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEAL 290 (314)
T ss_pred ccchhhHHHHHHHHHHhCCCCC-CCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 56899999999999998 4322 111223333333332 357899999999997654 68888876554
No 125
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=43.55 E-value=76 Score=29.76 Aligned_cols=65 Identities=11% Similarity=0.205 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+-|+-+||.++..+.+ +..+-. ..+.......+. ..++.++.+++..++...+ +.+++++..+|
T Consensus 182 ~~~Di~slG~~l~~l~t~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L 257 (260)
T cd05073 182 IKSDVWSFGILLMEIVTYGRIPYP-GMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 257 (260)
T ss_pred ccccchHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 46799999999999998 654321 111222222222 2477899999999997654 68888877665
No 126
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=43.51 E-value=86 Score=29.53 Aligned_cols=66 Identities=14% Similarity=0.245 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHHHHHhcC-CchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCR-SLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~-~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
.+-|+-+||.++..+.++ ..+ ....+..+.+..+. ..++..+++++..++...+ +.++.+++..+.
T Consensus 197 ~~~Di~slG~~l~~l~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 197 TKSDVWSFGVLMWEVFTQGELP-FYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred chhhHHHHHHHHHHHHhCCCCC-ccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 457999999999999884 322 11111122222221 2477899999999997654 689998877653
No 127
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=43.08 E-value=30 Score=35.26 Aligned_cols=63 Identities=14% Similarity=0.169 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-----------hhcCHHHHHHHHHHhccCC----cCCHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-----------RSYSADLRNLILYLLSVHQ----KRTVVDLM 178 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-----------~~yS~dl~~~i~~Lls~~~----~k~i~~l~ 178 (487)
..+-|+-+||.++..|+++..+-. ..+....+..+. ..+|.+++++|..+|...+ +.++++++
T Consensus 225 ~~~~DiwSlGvilyelltG~~Pf~-~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell 302 (370)
T cd05596 225 GRECDWWSVGVFLYEMLVGDTPFY-ADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIK 302 (370)
T ss_pred CCceeeeehhHHHHHHHhCCCCcC-CCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHh
Confidence 357899999999999999976521 223322223221 1489999999999997543 34777653
No 128
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=42.86 E-value=69 Score=31.07 Aligned_cols=59 Identities=20% Similarity=0.170 Sum_probs=38.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCC
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRT 173 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~ 173 (487)
.++-|+-+||.+++.|.++..+-...++...-.+.+.+ .++.+++++|..++...+ +.+
T Consensus 210 ~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 210 GSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred CchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCC
Confidence 46789999999999999988652111111111111211 258999999999997654 455
No 129
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=42.58 E-value=53 Score=39.64 Aligned_cols=64 Identities=22% Similarity=0.294 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
..+-|+-+||.+|+.|+|+..+-....+..+.+..+. ..+|.++.++|..+|...+ ++++.+++
T Consensus 221 s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL 293 (1021)
T PTZ00266 221 DDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCL 293 (1021)
T ss_pred CchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHh
Confidence 4567999999999999998765322234444444443 2479999999999998664 57877764
No 130
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=42.56 E-value=69 Score=30.72 Aligned_cols=62 Identities=16% Similarity=0.272 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHH-HHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTS-IDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~s-l~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+.|+-+||.++..|.++..+-. ..+..+. ..... ..+|.++.++|..++...+ +.++.+++
T Consensus 194 ~~~Dv~slG~il~el~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 267 (292)
T cd06644 194 YKADIWSLGITLIEMAQIEPPHH-ELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLL 267 (292)
T ss_pred chhhhHhHHHHHHHHhcCCCCCc-cccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 56899999999999999986521 1121111 11111 2478899999999997653 57777653
No 131
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=42.51 E-value=71 Score=30.41 Aligned_cols=63 Identities=14% Similarity=0.163 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhc---cHHHHH------------------------------HHHhhhcCHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRE---NLQTSI------------------------------DLMARSYSADLRNLI 162 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~---n~~~sl------------------------------~~~~~~yS~dl~~~i 162 (487)
.+-|+-+||.++..|+++.++-.... .+.+.+ +.+...++.+++++|
T Consensus 188 ~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 267 (290)
T cd07862 188 TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLL 267 (290)
T ss_pred CccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHH
Confidence 56799999999999998875411111 111111 112234678888899
Q ss_pred HHHhccCC--cCCHHHHH
Q psy1282 163 LYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 163 ~~Lls~~~--~k~i~~l~ 178 (487)
..++...+ +.++.+++
T Consensus 268 ~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 268 LKCLTFNPAKRISAYSAL 285 (290)
T ss_pred HHHhccCchhcCCHHHHh
Confidence 99887664 57777654
No 132
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=42.47 E-value=72 Score=30.22 Aligned_cols=64 Identities=16% Similarity=0.225 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH--------hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM--------ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~--------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
+-+-|+-+||.++..++++..+-.. .+.......+ ...++.++.++|..++...+ +.++.+++.
T Consensus 179 ~~~~Dv~slG~il~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 179 DFKADIWSLGITAIELAKGEPPNSD-LHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred chhhhHHHHHHHHHHHHhCCCCCcc-cchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 3578999999999999998765211 1111111111 12478899999999997654 688888755
No 133
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=42.34 E-value=63 Score=30.75 Aligned_cols=65 Identities=15% Similarity=0.260 Sum_probs=43.2
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh------------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA------------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~------------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+.+-|+-+||.++..+.++..+-.........+..+. ..+|.++++++..++...+ +.+.++++
T Consensus 187 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~ 265 (288)
T cd06616 187 YDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELL 265 (288)
T ss_pred CcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 34678999999999999998765211111111111110 1388999999999998664 68888753
No 134
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=42.19 E-value=44 Score=31.82 Aligned_cols=66 Identities=12% Similarity=0.240 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhh-hccH-------------HHHHHHH--------hhhcCHHHHHHHHHHhccCC--c
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQ-RENL-------------QTSIDLM--------ARSYSADLRNLILYLLSVHQ--K 171 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~-~~n~-------------~~sl~~~--------~~~yS~dl~~~i~~Lls~~~--~ 171 (487)
-+-|+-+||.++..|.++..+... +... ....+.+ ...++.++++++...+...+ +
T Consensus 189 ~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 268 (283)
T cd05080 189 YASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFR 268 (283)
T ss_pred cccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhC
Confidence 457999999999999998644211 0000 0111111 12467899999999998654 6
Q ss_pred CCHHHHHHHH
Q psy1282 172 RTVVDLMPMI 181 (487)
Q Consensus 172 k~i~~l~~~I 181 (487)
.+++++...+
T Consensus 269 ps~~~i~~~l 278 (283)
T cd05080 269 PTFRSLIPIL 278 (283)
T ss_pred CCHHHHHHHH
Confidence 8998876654
No 135
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=41.90 E-value=73 Score=29.96 Aligned_cols=64 Identities=22% Similarity=0.266 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHH---------HHhhhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSID---------LMARSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~---------~~~~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
..+-|+-+||.+++.|+++..+-...+.....+. .+...+++++++++..++...+ +.++.+++
T Consensus 189 ~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll 263 (268)
T cd06624 189 GAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLL 263 (268)
T ss_pred CchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHH
Confidence 3578999999999999998754211111111110 0123578899999999997653 67887764
No 136
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=41.82 E-value=49 Score=30.79 Aligned_cols=63 Identities=17% Similarity=0.270 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH--------hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM--------ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~--------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+.|+-+||.++..+.++..+- ...+.......+ ...+|.+++++|..++...+ +.+..+++.
T Consensus 179 ~~~Dv~slG~i~~~l~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 179 NKSDIWSLGCILYELCTLKHPF-QANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred chhhhhhhchhheehhhccCCC-CCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 4689999999999999887552 122333322222 13478999999999997664 688887654
No 137
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=41.80 E-value=43 Score=31.21 Aligned_cols=63 Identities=19% Similarity=0.252 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhc--c-HHHHHHHH--------hhhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRE--N-LQTSIDLM--------ARSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~--n-~~~sl~~~--------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+-|+-+||.++..|+++..+-...+ + .....+.. ...++.++++++..++...+ +.+..+++
T Consensus 187 ~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll 262 (268)
T cd06630 187 RSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELL 262 (268)
T ss_pred cccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHh
Confidence 56899999999999999875421111 1 11111111 12478999999999997553 57777654
No 138
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=41.78 E-value=94 Score=29.28 Aligned_cols=64 Identities=17% Similarity=0.179 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhcc---HHHH---------------------------------HHHHhhhcCHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQREN---LQTS---------------------------------IDLMARSYSADL 158 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n---~~~s---------------------------------l~~~~~~yS~dl 158 (487)
..+-|+-+||.++..|.++.+.-....+ .... +..+...++.++
T Consensus 179 ~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (286)
T cd07832 179 DPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEA 258 (286)
T ss_pred CchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHH
Confidence 4689999999999999998542110111 1111 111123467888
Q ss_pred HHHHHHHhccCC--cCCHHHHH
Q psy1282 159 RNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 159 ~~~i~~Lls~~~--~k~i~~l~ 178 (487)
+++|+.++...+ +.++.+++
T Consensus 259 ~~li~~~l~~~p~~R~~~~~~l 280 (286)
T cd07832 259 LDLLKGLLVYDPSKRLSAAEAL 280 (286)
T ss_pred HHHHHHHhccChhhCCCHHHHh
Confidence 899999987654 57777654
No 139
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=41.22 E-value=86 Score=30.53 Aligned_cols=63 Identities=16% Similarity=0.248 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh----------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA----------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
-+.|+-+||.+++.|.++..+-.. ......+..+. ..++.++.++|..++...+ +.++.+++.
T Consensus 196 ~~~Dv~slG~il~el~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 196 TEVDIWSLGIMVIEMVDGEPPYFS-DSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 468999999999999998754211 12222233322 2578999999999997553 577777644
No 140
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=41.12 E-value=77 Score=30.05 Aligned_cols=64 Identities=14% Similarity=0.193 Sum_probs=40.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhh---ccHHHHHH------------------------------HHhhhcCHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQR---ENLQTSID------------------------------LMARSYSADLRNL 161 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~---~n~~~sl~------------------------------~~~~~yS~dl~~~ 161 (487)
+.+-|+-+||.++..|+++.++-... +.+.+.++ .+...++.+++++
T Consensus 185 ~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 264 (288)
T cd07863 185 ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQL 264 (288)
T ss_pred CCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHH
Confidence 36789999999999999886532110 11111111 1223578888999
Q ss_pred HHHHhccCC--cCCHHHHH
Q psy1282 162 ILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 162 i~~Lls~~~--~k~i~~l~ 178 (487)
|..++...+ +.++.+++
T Consensus 265 i~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 265 LLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred HHHHhccCcccCCCHHHHh
Confidence 999997654 57776654
No 141
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=40.76 E-value=38 Score=33.49 Aligned_cols=64 Identities=16% Similarity=0.174 Sum_probs=41.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh---------------hhcCHHHHHHHHHHhccCC--cCCHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA---------------RSYSADLRNLILYLLSVHQ--KRTVVDL 177 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~---------------~~yS~dl~~~i~~Lls~~~--~k~i~~l 177 (487)
..+-|+-+||.++..|.++..+- ...+.....+.+. ..+|.+++++|..++...+ +.++.++
T Consensus 176 ~~~~DvwslG~il~ell~g~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~l 254 (333)
T cd05600 176 DFTVDYWSLGCMLYEFLCGFPPF-SGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDI 254 (333)
T ss_pred CCccceecchHHHhhhhhCCCCC-CCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHH
Confidence 36789999999999999987652 1122222222221 1358999999999887554 3577766
Q ss_pred HH
Q psy1282 178 MP 179 (487)
Q Consensus 178 ~~ 179 (487)
+.
T Consensus 255 l~ 256 (333)
T cd05600 255 KN 256 (333)
T ss_pred Hh
Confidence 43
No 142
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=40.73 E-value=82 Score=29.90 Aligned_cols=67 Identities=10% Similarity=0.157 Sum_probs=42.8
Q ss_pred hhhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 114 HDLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
...+-|+-+||.++..+++ +..+- ............. ..++.++++++..++...+ +.++.+++..|
T Consensus 186 ~~~~~DiwslG~~l~el~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 186 LSIAADKWSFGTTLWEICYNGEIPL-KDKTLAEKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CCchhHHHHHHHHHHHHHhCCCCCC-CCcchhHHHHHHhcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 3467899999999999974 44331 1112222222212 2356889999999997654 68888876654
No 143
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=40.71 E-value=75 Score=30.59 Aligned_cols=62 Identities=18% Similarity=0.243 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh----------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA----------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
-+-|+-+||.++..|+++..+-. ..+....+..+. ..++.++.+++..++...+ +.+..+++
T Consensus 194 ~~~Dv~slGv~l~ell~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il 267 (285)
T cd06648 194 TEVDIWSLGIMVIEMVDGEPPYF-NEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELL 267 (285)
T ss_pred CcccHHHHHHHHHHHHhCCCCCc-CCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHc
Confidence 35799999999999999875411 112222222222 1278899999999997654 57777654
No 144
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=40.61 E-value=81 Score=29.56 Aligned_cols=63 Identities=17% Similarity=0.227 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
-+-|+-+||.++..|.++..+-.............. ..++.++++++..++...+ +.++.+++
T Consensus 195 ~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 267 (272)
T cd06637 195 FKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLM 267 (272)
T ss_pred chhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 368999999999999998764211111111111111 2478999999999997543 67777654
No 145
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=40.54 E-value=85 Score=29.66 Aligned_cols=20 Identities=25% Similarity=0.200 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHHHHhcCCc
Q psy1282 116 LQDDLTALGKLILAMTCRSL 135 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~ 135 (487)
-+-|+-+||.++..|.++.+
T Consensus 180 ~~~Dv~slG~~l~el~~g~~ 199 (286)
T cd07846 180 RAVDIWAVGCLVTEMLTGEP 199 (286)
T ss_pred chHhHHHHHHHHHHHHcCCC
Confidence 45899999999999999864
No 146
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=40.46 E-value=92 Score=31.30 Aligned_cols=68 Identities=15% Similarity=0.212 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhh--h-hccHHHHHHHH-----hhhcCHHHHHHHHHHhccCC--cCCHHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAV--Q-RENLQTSIDLM-----ARSYSADLRNLILYLLSVHQ--KRTVVDLMPMIGA 183 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~--~-~~n~~~sl~~~-----~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~~ 183 (487)
.+-|+-+||.++++|.+ +..+-. . .+.+...+..- ...++.++++++..++...+ ++++.+++.++..
T Consensus 254 ~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 254 TQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGD 332 (337)
T ss_pred ccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 46899999999999986 654311 1 01111121110 12478999999999887553 6899998877653
No 147
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=40.32 E-value=98 Score=30.08 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=19.6
Q ss_pred hhhHHHHHHHHHHHHHHhcCCch
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
...+-|+-+||.+++.|+++..+
T Consensus 182 ~~~~~DiwslG~il~el~tg~~p 204 (309)
T cd07872 182 YSTQIDMWGVGCIFFEMASGRPL 204 (309)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCC
Confidence 34689999999999999998754
No 148
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=39.74 E-value=1e+02 Score=28.53 Aligned_cols=65 Identities=12% Similarity=0.106 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
-+-|+-+||.+++.+.+ +..+- ...+..+.+..+. ..++.++.+++...+...+ +.++.++...+
T Consensus 179 ~~~Di~slG~~l~el~t~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 255 (257)
T cd05040 179 HASDVWMFGVTLWEMFTYGEEPW-AGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFL 255 (257)
T ss_pred chhhhHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHh
Confidence 45899999999999987 65431 1111122122111 2467899999999998664 68888876654
No 149
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=39.67 E-value=81 Score=30.74 Aligned_cols=67 Identities=6% Similarity=0.107 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
..+-|+-+||.++..+++ +..+- ...+..+..+.+.. .++.++.++|..++...+ +.++.+++..+.
T Consensus 201 ~~~~Di~slG~il~ellt~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 201 TTNSDVWSYGVLLWEIVSLGGTPY-CGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred cccccchhhhhHHHHHHhcCCCCc-ccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 367899999999999996 55431 11122222222221 368999999999997664 689998777664
No 150
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=39.59 E-value=69 Score=32.10 Aligned_cols=64 Identities=16% Similarity=0.203 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhh--hccHHHHHHHH--------hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQ--RENLQTSIDLM--------ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~--~~n~~~sl~~~--------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.+++.|.++..+-.. .......+..+ ...++.+++++|..++...+ +.++.+++.
T Consensus 252 ~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 252 YAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 478999999999999998754211 11111111111 13578999999999998664 678877654
No 151
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=39.41 E-value=1.1e+02 Score=30.33 Aligned_cols=65 Identities=12% Similarity=0.130 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+.|+-+||.++..|.+ +..+ ....+.......+.+ .++.++++++..++...+ +.++.+++..+
T Consensus 215 ~~~Di~slG~il~el~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 215 HQSDVWSFGVLLWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred chhhhHHHHHHHHHHHhcCCCC-CCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 46899999999999987 4332 111223333333322 467899999999997654 67888765544
No 152
>KOG0575|consensus
Probab=39.34 E-value=60 Score=37.00 Aligned_cols=64 Identities=16% Similarity=0.309 Sum_probs=50.0
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhh-------hcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMAR-------SYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~-------~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
|+=--|+-++|.+|-.|-+|.+| ....+++....-+.. .-|.+-+++|.-||.+.+ +.++++++
T Consensus 195 HsfEvDiWSlGcvmYtLL~G~PP-Fetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL 267 (592)
T KOG0575|consen 195 HSFEVDIWSLGCVMYTLLVGRPP-FETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVL 267 (592)
T ss_pred CCCchhhhhhhhHHHhhhhCCCC-cccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 44667999999999999999876 334556666665552 468899999999999876 68998864
No 153
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=39.20 E-value=97 Score=30.08 Aligned_cols=63 Identities=17% Similarity=0.222 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh----------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA----------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
-+.|+-+||.+++.|.++..+-.. .+....+..+. ..+|.++++++..++...+ +.++.+++.
T Consensus 197 ~~~Dv~slGvil~el~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 197 TEVDIWSLGIMVIEMIDGEPPYFN-EPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 468999999999999998765211 11122222221 1478999999999987654 678777643
No 154
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=39.02 E-value=83 Score=30.56 Aligned_cols=62 Identities=18% Similarity=0.207 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 117 qeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
+-|+-+||.+++.|+++..+-. ..+....+..+. ..+|.+++++|..+++..+ +.++.+++.
T Consensus 194 ~sDv~s~G~il~el~tg~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 194 KVDVWSLGITCIELAERKPPLF-NMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred ccchHHHHHHHHHHHcCCCCCC-CccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 5799999999999999976522 112221111111 2478899999999997654 678887644
No 155
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=38.92 E-value=98 Score=29.82 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
..+-|+-+||.++..|+++..+
T Consensus 182 ~~~~DiwslG~~l~~l~~g~~p 203 (288)
T cd07871 182 STPIDMWGVGCILYEMATGRPM 203 (288)
T ss_pred CcHHHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999998743
No 156
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=38.75 E-value=85 Score=30.82 Aligned_cols=63 Identities=16% Similarity=0.232 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
-+-|+-+||.+++.|+++..+-.. .+....+..+. ..++.++++++..++...+ +.++.+++.
T Consensus 199 ~~sDv~slGvil~el~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 199 GKVDVWSLGITCIELAERKPPLFN-MNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 457999999999999998764211 12111111111 2578899999999997654 678887653
No 157
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=38.57 E-value=96 Score=29.64 Aligned_cols=23 Identities=9% Similarity=0.036 Sum_probs=19.0
Q ss_pred hhhHHHHHHHHHHHHHHhcCCch
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
+...-|+-+||.++..|+++.++
T Consensus 195 ~~~~~Di~slG~~~~el~~g~~~ 217 (302)
T cd07864 195 YGPAIDVWSCGCILGELFTKKPI 217 (302)
T ss_pred CCchhHHHHHHHHHHHHHhCCCC
Confidence 34678999999999999988643
No 158
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=38.54 E-value=1e+02 Score=29.75 Aligned_cols=66 Identities=12% Similarity=0.059 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHHHHHhcC--CchhhhhccHHHHHHHH---------------hhhcCHHHHHHHHHHhccCC--cCCHH
Q psy1282 115 DLQDDLTALGKLILAMTCR--SLMAVQRENLQTSIDLM---------------ARSYSADLRNLILYLLSVHQ--KRTVV 175 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~--~~~a~~~~n~~~sl~~~---------------~~~yS~dl~~~i~~Lls~~~--~k~i~ 175 (487)
..+-|+-+||.+++.|.++ ..+ ....+..+.+..+ ...++.++++++..++...+ +++++
T Consensus 209 ~~~~DvwSlG~~l~el~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~ 287 (295)
T cd05097 209 TTASDVWAFGVTLWEMFTLCKEQP-YSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFN 287 (295)
T ss_pred CchhhHHHHHHHHHHHHHcCCCCC-CcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence 4689999999999999873 222 1111111111111 12367899999999998664 79999
Q ss_pred HHHHHH
Q psy1282 176 DLMPMI 181 (487)
Q Consensus 176 ~l~~~I 181 (487)
++.+.+
T Consensus 288 ~i~~~l 293 (295)
T cd05097 288 KIHHFL 293 (295)
T ss_pred HHHHHH
Confidence 886655
No 159
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=38.36 E-value=92 Score=29.86 Aligned_cols=64 Identities=14% Similarity=0.214 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhh----ccHHHHHHHHh--------------hhcCHHHHHHHHHHhccCC--cCCHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQR----ENLQTSIDLMA--------------RSYSADLRNLILYLLSVHQ--KRTVV 175 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~----~n~~~sl~~~~--------------~~yS~dl~~~i~~Lls~~~--~k~i~ 175 (487)
.+-|+-+||.++..|.++..+--.. ....+....+. ..+++++.++|.+++...+ +.++.
T Consensus 182 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 261 (287)
T cd06621 182 ITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPW 261 (287)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHH
Confidence 4689999999999999987541100 01111122211 1356789999999997553 68887
Q ss_pred HHHH
Q psy1282 176 DLMP 179 (487)
Q Consensus 176 ~l~~ 179 (487)
+++.
T Consensus 262 eil~ 265 (287)
T cd06621 262 DMLE 265 (287)
T ss_pred HHHh
Confidence 7543
No 160
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=38.12 E-value=89 Score=29.68 Aligned_cols=64 Identities=22% Similarity=0.291 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHHHHhcCCchh--hhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMA--VQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a--~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..+.++..+- ....+....+..+. ..++.+++++|..++...+ +.++.+++.
T Consensus 186 ~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 186 VQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred cccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 4679999999999999987552 11112222222211 2489999999999997543 688887654
No 161
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=37.96 E-value=87 Score=29.77 Aligned_cols=63 Identities=16% Similarity=0.200 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
+.+.|+-+||.++..++++..+-.. .+.......+. ..++.++.+++..++...+ +.++.+++
T Consensus 179 ~~~~Dv~slG~il~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 251 (277)
T cd06640 179 DSKADIWSLGITAIELAKGEPPNSD-MHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELL 251 (277)
T ss_pred ccHHHHHHHHHHHHHHHHCCCCCCC-cChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHH
Confidence 4679999999999999999765211 11111122211 2467889999999997654 68888763
No 162
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=37.89 E-value=1.2e+02 Score=28.42 Aligned_cols=67 Identities=9% Similarity=0.055 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
+.+-|+-+||.+++.+.+ +..+-. ..+....+..+. ..++.++++++...+...+ +.++.+++..+.
T Consensus 186 ~~~~Di~slG~il~el~~~g~~pf~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~ 263 (270)
T cd05056 186 TSASDVWMFGVCMWEILMLGVKPFQ-GVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLS 263 (270)
T ss_pred CchhhhHHHHHHHHHHHHcCCCCCC-CCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 467899999999999775 654321 111112222222 2468999999999997664 688888766553
No 163
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=37.67 E-value=1.1e+02 Score=28.84 Aligned_cols=22 Identities=14% Similarity=0.197 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
..+-|+-+||.+++.|+++..+
T Consensus 179 ~~~~Dv~slG~~l~~l~~g~~~ 200 (284)
T cd07836 179 STSIDIWSVGCIMAEMITGRPL 200 (284)
T ss_pred CcHHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999998753
No 164
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=37.28 E-value=80 Score=30.17 Aligned_cols=64 Identities=13% Similarity=0.137 Sum_probs=41.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh----------hhcCHHHHHHHHHHhccC--CcCCHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA----------RSYSADLRNLILYLLSVH--QKRTVVDLMP 179 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~----------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~ 179 (487)
+.+-|+-+||.++..|+++..+-. ..+....+..+. ..++.+++++|..++... .+.++.+++.
T Consensus 211 ~~~~Di~slGvi~~el~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 211 DARCDVWSLGITAIELGDGDPPLF-DMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred CCccchHHHHHHHHHHhhCCCCCC-CCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 356899999999999999875421 111112222221 247788999999988654 3688877643
No 165
>KOG0589|consensus
Probab=37.07 E-value=45 Score=36.49 Aligned_cols=64 Identities=20% Similarity=0.319 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH--------hhhcCHHHHHHHHHHhccCC--cCCHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM--------ARSYSADLRNLILYLLSVHQ--KRTVVDLMPM 180 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~--------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~ 180 (487)
...|+-+||..|-.+||...+ ....|++.-+.-+ ...||.+|+.+|.-++...+ +.++.+++.+
T Consensus 185 ~KSDiWsLGC~~yEm~~lk~a-F~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 185 EKSDIWSLGCCLYEMCTLKPA-FKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccCcchhhcchHHHHHhcccc-cCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 678999999999999998653 2223444322222 24799999999999998775 6999998877
No 166
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=37.04 E-value=17 Score=24.66 Aligned_cols=25 Identities=20% Similarity=0.388 Sum_probs=20.0
Q ss_pred hcccccCCCCCcccChHHHHHHhhh
Q psy1282 249 YLLHQVQEDGRPWLDMSHIVHCLNK 273 (487)
Q Consensus 249 YVFHQVDe~G~PvlDL~HVl~cLNK 273 (487)
.+|++.|.+|.=.|+..-+..+|+|
T Consensus 4 ~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 4 EAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 5788899999989998888888876
No 167
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=36.26 E-value=1e+02 Score=30.68 Aligned_cols=23 Identities=17% Similarity=0.081 Sum_probs=19.3
Q ss_pred hhhHHHHHHHHHHHHHHhcCCch
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
...+-|+-+||.++..|+++..+
T Consensus 196 ~~~~~DiwSlGvil~el~~g~~p 218 (342)
T cd07854 196 YTKAIDMWAAGCIFAEMLTGKPL 218 (342)
T ss_pred cCchhhHHHHHHHHHHHHhCCCC
Confidence 34678999999999999998753
No 168
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=36.23 E-value=1.1e+02 Score=29.15 Aligned_cols=20 Identities=25% Similarity=0.166 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHHHHhcCCc
Q psy1282 116 LQDDLTALGKLILAMTCRSL 135 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~ 135 (487)
-+-|+-+||.++..|.++..
T Consensus 203 ~~~Di~slG~~l~el~t~~~ 222 (310)
T cd07865 203 PPIDMWGAGCIMAEMWTRSP 222 (310)
T ss_pred chhhhHHHHHHHHHHHhCCC
Confidence 46899999999999998864
No 169
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=36.14 E-value=41 Score=30.94 Aligned_cols=70 Identities=13% Similarity=0.093 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhh---------hcCHHHHHHHHHHhccCC--cCCHHHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMAR---------SYSADLRNLILYLLSVHQ--KRTVVDLMPMIGAR 184 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~---------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~~r 184 (487)
.+-|+-+||.++..|.++..+-. ..+.....+.+.. .++.++.+++..++...+ +.++..+...+...
T Consensus 180 ~~~Dv~slG~~~~~l~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~ 258 (265)
T cd05579 180 KTVDWWSLGCILYEFLVGIPPFH-GETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHP 258 (265)
T ss_pred cchhhHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCc
Confidence 57899999999999999865421 1122222222211 238999999999997654 45553333334443
Q ss_pred HH
Q psy1282 185 YY 186 (487)
Q Consensus 185 ~~ 186 (487)
+|
T Consensus 259 ~~ 260 (265)
T cd05579 259 FF 260 (265)
T ss_pred cc
Confidence 33
No 170
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=36.07 E-value=69 Score=30.21 Aligned_cols=64 Identities=20% Similarity=0.247 Sum_probs=42.8
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+++-|+-+||.++..|.++..+-. ..+.......+. ..++.++++++..++...+ +.+..+++
T Consensus 179 ~~~~~Dv~slG~~l~~ll~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il 253 (277)
T cd06917 179 YDTKADIWSLGITIYEMATGNPPYS-DVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELL 253 (277)
T ss_pred cccchhHHHHHHHHHHHHhCCCCCC-CCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHh
Confidence 3578999999999999999876521 111221111111 1388999999999997654 57777653
No 171
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=35.95 E-value=1.2e+02 Score=28.69 Aligned_cols=66 Identities=9% Similarity=0.132 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHHHhcC-CchhhhhccHHHHHHH-------------HhhhcCHHHHHHHHHHhc-cCCcCCHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCR-SLMAVQRENLQTSIDL-------------MARSYSADLRNLILYLLS-VHQKRTVVDLMPM 180 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~-~~~a~~~~n~~~sl~~-------------~~~~yS~dl~~~i~~Lls-~~~~k~i~~l~~~ 180 (487)
.+-|+-+||.+++.|.++ ..+ ....+....+.. +...|++++++++..++. |..++++.+++..
T Consensus 187 ~~~DiwslG~~l~el~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 187 KPSNVWALGVTLWELFENAAQP-YSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCWLSPEKRATAEEVHRL 265 (268)
T ss_pred CcchhHHHHHHHHHHHhCCCCC-CCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHhhCcccCCCHHHHHHH
Confidence 468999999999999754 322 111111111211 112488999998886663 4457999988776
Q ss_pred HH
Q psy1282 181 IG 182 (487)
Q Consensus 181 I~ 182 (487)
++
T Consensus 266 l~ 267 (268)
T cd05086 266 LT 267 (268)
T ss_pred hc
Confidence 53
No 172
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=35.93 E-value=1.4e+02 Score=27.96 Aligned_cols=66 Identities=12% Similarity=0.135 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
.+-|+-+||.++..+.+ +..+-.. .......+.+. ..++.++.+++..++...+ +.++.+++..+.
T Consensus 187 ~~~Dv~slG~~l~~l~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~ 263 (266)
T cd05033 187 SASDVWSFGIVMWEVMSYGERPYWD-MSNQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLD 263 (266)
T ss_pred cccchHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 57899999999999876 5443211 11122222222 2478999999999997654 689988776653
No 173
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=35.73 E-value=88 Score=29.82 Aligned_cols=66 Identities=14% Similarity=0.144 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
..+-|+-+||.+++.|++ +..+ ....+..+..+.+.. .++.++.+++...+...+ +.++.+++..+
T Consensus 212 ~~~~Di~slG~il~el~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l 288 (293)
T cd05053 212 THQSDVWSFGVLLWEIFTLGGSP-YPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDL 288 (293)
T ss_pred CcccceeehhhHHHHHhcCCCCC-CCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 466899999999999987 4332 111223333333332 357899999999998654 68888876554
No 174
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=35.53 E-value=1e+02 Score=29.08 Aligned_cols=22 Identities=14% Similarity=0.063 Sum_probs=18.9
Q ss_pred hhhHHHHHHHHHHHHHHhcCCc
Q psy1282 114 HDLQDDLTALGKLILAMTCRSL 135 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~ 135 (487)
...+-|+-+||.+++.+.++.+
T Consensus 179 ~~~~~Dv~slG~~l~~l~~g~~ 200 (288)
T cd07833 179 YGKPVDVWAIGCIMAELLDGEP 200 (288)
T ss_pred cCchhhHHHHHHHHHHHHhCCC
Confidence 3478999999999999999864
No 175
>KOG0583|consensus
Probab=34.07 E-value=94 Score=32.82 Aligned_cols=65 Identities=20% Similarity=0.364 Sum_probs=49.4
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhh-------hc-CHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 113 YHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMAR-------SY-SADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 113 yh~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~-------~y-S~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
|+--.-|+-++|.+|..|.||..+= ...|.......+.+ .. |.+.+.+|.-+|...+ +.++.+++
T Consensus 199 Y~g~~aDvWS~GViLy~ml~G~~PF-~d~~~~~l~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 199 YSGKAADVWSLGVILYVLLCGRLPF-DDSNVPNLYRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred cCCchhhhhhhHHHHHHHHhCCCCC-CCccHHHHHHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 6667889999999999999998762 23455554444443 34 9999999999998775 68888765
No 176
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=33.86 E-value=1e+02 Score=29.88 Aligned_cols=63 Identities=19% Similarity=0.245 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH----------hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM----------ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~----------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..|.++..+-.. .+....+... ...++..+++++..++...+ +.++.+++.
T Consensus 195 ~~~Dv~s~Gvil~~l~~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 195 PKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ccchHHHHHHHHHHHHhCCCCCCC-CCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 578999999999999998865322 1221111111 12478899999999997553 678777643
No 177
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=33.72 E-value=1e+02 Score=28.96 Aligned_cols=21 Identities=14% Similarity=0.197 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHHHHhcCCch
Q psy1282 116 LQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~ 136 (487)
++.|+-+||.++..|+++.++
T Consensus 185 ~~~Di~s~G~~l~~l~~~~~~ 205 (287)
T cd07838 185 TPVDMWSVGCIFAELFRRRPL 205 (287)
T ss_pred CcchhhhHHHHHHHHHhCCCc
Confidence 678999999999999988643
No 178
>KOG0581|consensus
Probab=33.70 E-value=56 Score=35.20 Aligned_cols=62 Identities=13% Similarity=0.229 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHhcCCchhhh----hccHHHHHHHHhh---------hcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 118 DDLTALGKLILAMTCRSLMAVQ----RENLQTSIDLMAR---------SYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 118 eDl~~lG~LiLaLA~~~~~a~~----~~n~~~sl~~~~~---------~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
-|+-+||-.||++|.|.-+-.. ..+.-+-+..+.. .||+||+..|-..|.+.+ +.+..+|+.
T Consensus 258 sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 258 SDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred cceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 7999999999999999643221 1234455555543 499999999999998875 588888754
No 179
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=33.70 E-value=1.5e+02 Score=28.26 Aligned_cols=63 Identities=16% Similarity=0.194 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
-+.|+-+||.++..++++..+-. ..+.......+. ..++.++.++|..++...+ +.++.++..
T Consensus 180 ~~~Dv~slG~~l~~l~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 180 SKADIWSLGITAIELAKGEPPHS-ELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred chhhHHHHHHHHHHHHcCCCCCC-ccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 46899999999999999876521 111122222221 2478899999999997553 678877654
No 180
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=33.69 E-value=1.5e+02 Score=27.95 Aligned_cols=67 Identities=9% Similarity=0.129 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHH-------------HhhhcCHHHHHHHHHHhc-cCCcCCHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDL-------------MARSYSADLRNLILYLLS-VHQKRTVVDLMP 179 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~-------------~~~~yS~dl~~~i~~Lls-~~~~k~i~~l~~ 179 (487)
..+-|+-+||.+++.|.+ +..+-....+.. .+.. +...++..+++++..+.. +..+++++++..
T Consensus 187 ~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~Rpt~~~v~~ 265 (269)
T cd05042 187 TKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCWLDPETRPTAEEVHE 265 (269)
T ss_pred chhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhccCccCCCCcccccCCHHHHHHHHHHhcCcccccCHHHHHH
Confidence 468999999999999988 443311111111 1111 112578889998887664 445789998877
Q ss_pred HHH
Q psy1282 180 MIG 182 (487)
Q Consensus 180 ~I~ 182 (487)
+++
T Consensus 266 ~l~ 268 (269)
T cd05042 266 LLT 268 (269)
T ss_pred Hhc
Confidence 663
No 181
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=33.60 E-value=1.9e+02 Score=27.37 Aligned_cols=65 Identities=8% Similarity=0.098 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHHHhc-CCchh--hhhccHHHHHHHH-----hhhcCHHHHHHHHHHhccC--CcCCHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMA--VQRENLQTSIDLM-----ARSYSADLRNLILYLLSVH--QKRTVVDLMPM 180 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a--~~~~n~~~sl~~~-----~~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~ 180 (487)
.+-|+-+||.++..|.+ +..+- .....+...+... ...++.++++++...+... .+.++.+++..
T Consensus 190 ~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~ 264 (279)
T cd05109 190 HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264 (279)
T ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 56799999999999876 54331 1111111212111 1247899999999999755 46888887654
No 182
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=33.59 E-value=2e+02 Score=27.22 Aligned_cols=65 Identities=11% Similarity=0.103 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHHh-cCCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMT-CRSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA-~~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+-|+-+||.++..+. ++..+- ...+....++.+.+ .++.++++++...+...+ +++++++...+
T Consensus 187 ~~~Di~slG~~l~ell~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l 262 (266)
T cd05064 187 SASDVWSFGIVMWEVMSYGERPY-WDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSIL 262 (266)
T ss_pred chhHHHHHHHHHHHHhcCCCCCc-CcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHH
Confidence 5789999999999954 465442 11122222333332 467899999998887653 68888876654
No 183
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=33.53 E-value=1.3e+02 Score=29.26 Aligned_cols=62 Identities=18% Similarity=0.263 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh----------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA----------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+-|+-+||.++..|.++..+-...+.... +..+. ..++++++++|..++...+ +.++.+++
T Consensus 194 ~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il 267 (296)
T cd06655 194 PKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELL 267 (296)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHh
Confidence 568999999999999998765321111111 11111 2478899999999986553 57777653
No 184
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=33.26 E-value=1.3e+02 Score=29.33 Aligned_cols=22 Identities=9% Similarity=0.114 Sum_probs=18.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
..+-|+-+||.++..++++..+
T Consensus 186 ~~~~DvwSlGvvl~el~tg~~p 207 (338)
T cd07859 186 TPAIDIWSIGCIFAEVLTGKPL 207 (338)
T ss_pred CchhHHHHHHHHHHHHHcCCCC
Confidence 3578999999999999998643
No 185
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=33.22 E-value=46 Score=34.07 Aligned_cols=64 Identities=16% Similarity=0.200 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-----------hhcCHHHHHHHHHHhccCC----cCCHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-----------RSYSADLRNLILYLLSVHQ----KRTVVDLMP 179 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-----------~~yS~dl~~~i~~Lls~~~----~k~i~~l~~ 179 (487)
..+-|+-+||.++..|+++..+-. ..+.......+. ..+|.+++++|..+|.... +.++.+++.
T Consensus 225 ~~~~DiwSlGvilyell~G~~Pf~-~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 225 GRECDWWSVGVFLYEMLVGDTPFY-ADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 303 (371)
T ss_pred CCccceeehhHHHHHHHhCCCCCC-CCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence 467899999999999999876522 223322222221 1589999999999997443 246666543
No 186
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]
Probab=33.02 E-value=26 Score=34.21 Aligned_cols=28 Identities=29% Similarity=0.468 Sum_probs=25.0
Q ss_pred CCCccccHhHHHHhccccCCCCcceEEeeecCC
Q psy1282 419 DGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 451 (487)
Q Consensus 419 ~G~pvlDl~HVl~cLNKLDaG~~Eki~LvSrDe 451 (487)
.|+|.+| ||+.+|+| .++|-+..+|+.-
T Consensus 25 ~GkpLI~--~v~~al~~---~~d~i~v~isp~t 52 (177)
T COG2266 25 CGKPLID--RVLEALRK---IVDEIIVAISPHT 52 (177)
T ss_pred CCccHHH--HHHHHHHh---hcCcEEEEeCCCC
Confidence 4889876 89999999 9999999999975
No 187
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=32.95 E-value=1.3e+02 Score=29.08 Aligned_cols=55 Identities=25% Similarity=0.184 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~ 170 (487)
+.+-|+-+||.++..|+++..+-. ..+.....+.+. +.+|.+++++|..++...+
T Consensus 176 ~~~~DiwSlG~il~~l~~g~~pf~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp 237 (291)
T cd05612 176 NKAVDWWALGILIYEMLVGYPPFF-DDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDR 237 (291)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCH
Confidence 467899999999999999875421 122222222221 3579999999999998764
No 188
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=32.73 E-value=91 Score=30.90 Aligned_cols=55 Identities=22% Similarity=0.328 Sum_probs=38.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~ 170 (487)
..+-|+-+||.++..|.++..+-. ..+.....+.+. +.+|++++++|..++...+
T Consensus 173 ~~~~DiwSlGvil~ell~g~~Pf~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP 234 (323)
T cd05595 173 GRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDP 234 (323)
T ss_pred CchhchhhhHHHHHHHHhCCCCCC-CCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCH
Confidence 367899999999999999876522 122222222222 3689999999999998764
No 189
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=32.37 E-value=1.6e+02 Score=27.60 Aligned_cols=65 Identities=11% Similarity=0.120 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
.+.|+-+||.++.++.+ +..+-. ..+.....+.+. ..++.++.+++..++...+ +.++++++.++
T Consensus 190 ~~~DvwslG~~l~e~l~~g~~p~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 265 (269)
T cd05065 190 SASDVWSYGIVMWEVMSYGERPYW-DMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTL 265 (269)
T ss_pred chhhhhhhHHHHHHHhcCCCCCCC-CCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 57899999999999654 654321 112222222222 1357899999999997654 68888876554
No 190
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=32.03 E-value=1.1e+02 Score=28.70 Aligned_cols=63 Identities=14% Similarity=0.150 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH------------hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM------------ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~------------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.+++.|+++..+-.. .+....+... ...||.+++++|..++...+ +.++++++.
T Consensus 188 ~~~DvwSlG~il~~l~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 188 QLCDIWAVGITAIELAELQPPMFD-LHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred chhhhHHHHHHHHHHhcCCCCccc-ccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 578999999999999998754211 1111111110 11478899999999997654 678877643
No 191
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=31.62 E-value=19 Score=34.63 Aligned_cols=55 Identities=22% Similarity=0.270 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhc--cHHHHHH-H-------HhhhcCHHHHHHHHHHhccCC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRE--NLQTSID-L-------MARSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~--n~~~sl~-~-------~~~~yS~dl~~~i~~Lls~~~ 170 (487)
-+-|+-+||.++..|+++..+-.... .....+. . ....+|.+++++|..+++..+
T Consensus 180 ~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P 244 (285)
T cd05631 180 FSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNP 244 (285)
T ss_pred cccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCH
Confidence 35699999999999999876521110 0111111 1 113589999999999998764
No 192
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=31.47 E-value=1.1e+02 Score=29.44 Aligned_cols=54 Identities=28% Similarity=0.240 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH-------hhhcCHHHHHHHHHHhccCC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM-------ARSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~-------~~~yS~dl~~~i~~Lls~~~ 170 (487)
.+-|+-+||.++..|.++..+-. ..+.....+.+ ...++.+++++|..++...+
T Consensus 177 ~~~Di~slG~il~~l~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 237 (290)
T cd05580 177 KAVDWWALGILIYEMLAGYPPFF-DDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDL 237 (290)
T ss_pred ccccHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccCCH
Confidence 56899999999999999876521 11111111111 13578999999999997664
No 193
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=31.36 E-value=1.4e+02 Score=28.60 Aligned_cols=21 Identities=19% Similarity=0.234 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHHHHhcCCch
Q psy1282 116 LQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~ 136 (487)
.+-|+-+||.++..|+++.++
T Consensus 206 ~~~Dv~slG~il~el~~g~~~ 226 (311)
T cd07866 206 TAVDIWGIGCVFAEMFTRRPI 226 (311)
T ss_pred chhHhHHHHHHHHHHHhCCCC
Confidence 468999999999999998643
No 194
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=31.36 E-value=1.2e+02 Score=28.90 Aligned_cols=66 Identities=8% Similarity=0.151 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhh--------------hccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--c
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQ--------------RENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--K 171 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~--------------~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~ 171 (487)
-+-|+-+||.++++|+++..+... ..+....++.+. ..+|.++.+++..++...+ +
T Consensus 191 ~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 270 (284)
T cd05079 191 IASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKR 270 (284)
T ss_pred ccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccC
Confidence 467999999999999875432110 011222222222 2478999999999997653 6
Q ss_pred CCHHHHHHHH
Q psy1282 172 RTVVDLMPMI 181 (487)
Q Consensus 172 k~i~~l~~~I 181 (487)
.++++++..+
T Consensus 271 pt~~~il~~l 280 (284)
T cd05079 271 TTFQNLIEGF 280 (284)
T ss_pred cCHHHHHHHH
Confidence 8888876544
No 195
>PF00447 HSF_DNA-bind: HSF-type DNA-binding; InterPro: IPR000232 Heat shock factor (HSF) is a transcriptional activator of heat shock genes []: it binds specifically to heat shock promoter elements, which are palindromic sequences rich with repetitive purine and pyrimidine motifs []. Under normal conditions, HSF is a homo-trimeric cytoplasmic protein, but heat shock activation results in relocalisation to the nucleus []. Each HSF monomer contains one C-terminal and three N-terminal leucine zipper repeats []. Point mutations in these regions result in disruption of cellular localisation, rendering the protein constitutively nuclear []. Two sequences flanking the N-terminal zippers fit the consensus of a bi- partite nuclear localisation signal (NLS). Interaction between the N- and C-terminal zippers may result in a structure that masks the NLS sequences: following activation of HSF, these may then be unmasked, resulting in relocalisation of the protein to the nucleus []. The DNA-binding component of HSF lies to the N terminus of the first NLS region, and is referred to as the HSF domain.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1FBQ_B 1FYL_B 1FBS_A 1FYM_B 3HTS_B 2HTS_A 3HSF_A 1FBU_B 1FYK_A 2LDU_A ....
Probab=31.30 E-value=19 Score=30.99 Aligned_cols=28 Identities=36% Similarity=0.534 Sum_probs=24.3
Q ss_pred HHhhcccccCCCCCCCCCCCcccCchHH
Q psy1282 378 LVKLGTINERPELNLDPTWSETGDRYML 405 (487)
Q Consensus 378 l~KL~~I~eRpe~~~d~~WsEtGdry~l 405 (487)
+.||=-|.+.|++..-..|++.|+.++|
T Consensus 3 ~~kL~~~l~~~~~~~~I~W~~~G~~fiI 30 (103)
T PF00447_consen 3 LSKLYEMLEDPENSDIIRWSPDGDSFII 30 (103)
T ss_dssp HHHHHHHHCTTTTTTTCEECTTSSEEEE
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCEEEE
Confidence 5677778889999888999999999876
No 196
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=31.11 E-value=1.1e+02 Score=29.09 Aligned_cols=64 Identities=16% Similarity=0.224 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHH---------HhhhcCHHHHHHHHHHhccC--CcCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDL---------MARSYSADLRNLILYLLSVH--QKRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~---------~~~~yS~dl~~~i~~Lls~~--~~k~i~~l~~ 179 (487)
.+.|+-+||.++..|+++..+-............ ....++.++++++..++... .+.++.+++.
T Consensus 208 ~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 282 (286)
T cd06638 208 ARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQ 282 (286)
T ss_pred chhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 4689999999999999987542111111111110 01247889999999999754 3688877653
No 197
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=30.98 E-value=1.9e+02 Score=27.11 Aligned_cols=22 Identities=9% Similarity=0.155 Sum_probs=19.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
+.+-|+-+||.++..|.++..+
T Consensus 180 ~~~~Dv~slG~~l~el~t~~~p 201 (287)
T cd07840 180 GPEVDMWSVGCILAELFLGKPI 201 (287)
T ss_pred ChHHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999988643
No 198
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=30.72 E-value=1.2e+02 Score=29.94 Aligned_cols=54 Identities=20% Similarity=0.161 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~ 170 (487)
.+-|+-+||.++..|+++..+-. ..+....++.+. ..+|.++.++|..++...+
T Consensus 180 ~~~DiwslG~il~el~~G~~pf~-~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP 240 (324)
T cd05589 180 RAVDWWGLGVLIYEMLVGESPFP-GDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNP 240 (324)
T ss_pred cccchhhHHHHHHHHHhCCCCCC-CCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence 56899999999999999876521 122233233222 2579999999999998764
No 199
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=30.44 E-value=2.2e+02 Score=26.95 Aligned_cols=66 Identities=6% Similarity=0.112 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
+.+-|+-+||.+++.+.+ +..+ ....+.....+.+.. ..+.++.+++.-.+...+ ++++.+++..+
T Consensus 189 ~~~~Di~slG~il~el~~~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 265 (270)
T cd05047 189 TTNSDVWSYGVLLWEIVSLGGTP-YCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 265 (270)
T ss_pred CchhhHHHHHHHHHHHHcCCCCC-ccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence 357899999999999986 6543 111222222222221 357889999999997654 68888876655
No 200
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=30.18 E-value=61 Score=30.39 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHH----H-----H--hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSID----L-----M--ARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~----~-----~--~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..|+++..+--.......... . . ...+|.+++++|..++...+ +.++++++.
T Consensus 188 ~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 264 (267)
T cd06646 188 QLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLT 264 (267)
T ss_pred chhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhc
Confidence 578999999999999988654211011110000 0 0 12478999999999997654 678887654
No 201
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=29.85 E-value=1.6e+02 Score=28.18 Aligned_cols=21 Identities=14% Similarity=0.204 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCc
Q psy1282 115 DLQDDLTALGKLILAMTCRSL 135 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~ 135 (487)
+.+-|+-+||.++..+.++.+
T Consensus 181 ~~~~Dv~slG~il~e~~~g~~ 201 (298)
T cd07841 181 GVGVDMWSVGCIFAELLLRVP 201 (298)
T ss_pred CcHHHHHHHHHHHHHHHcCCc
Confidence 478999999999999998854
No 202
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=29.74 E-value=36 Score=32.59 Aligned_cols=63 Identities=11% Similarity=0.129 Sum_probs=41.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhh-hc--cHHHHHH--------HHhhhcCHHHHHHHHHHhccCC--cCCHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQ-RE--NLQTSID--------LMARSYSADLRNLILYLLSVHQ--KRTVVDL 177 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~-~~--n~~~sl~--------~~~~~yS~dl~~~i~~Lls~~~--~k~i~~l 177 (487)
+.+-|+-+||.++..|+++..+-.. .. +...... ...+.||.+++++|..++...+ +.+..+.
T Consensus 172 ~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~ 247 (277)
T cd05607 172 SYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREK 247 (277)
T ss_pred CCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccc
Confidence 3678999999999999998765211 11 1111111 1113689999999999998664 5666443
No 203
>PTZ00036 glycogen synthase kinase; Provisional
Probab=29.71 E-value=1.6e+02 Score=31.18 Aligned_cols=64 Identities=19% Similarity=0.225 Sum_probs=40.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhcc---HHHHHHH--------------------------------HhhhcCHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQREN---LQTSIDL--------------------------------MARSYSADLR 159 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n---~~~sl~~--------------------------------~~~~yS~dl~ 159 (487)
..+-|+-+||.++..|++|.++-....+ +...+.. +....|.+++
T Consensus 249 ~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~ 328 (440)
T PTZ00036 249 TTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAI 328 (440)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHH
Confidence 4578999999999999999754211111 1111110 0113578899
Q ss_pred HHHHHHhccCC--cCCHHHHH
Q psy1282 160 NLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 160 ~~i~~Lls~~~--~k~i~~l~ 178 (487)
++|..+|...+ +.++.+++
T Consensus 329 ~li~~~L~~dP~~R~ta~e~l 349 (440)
T PTZ00036 329 NFISQFLKYEPLKRLNPIEAL 349 (440)
T ss_pred HHHHHHCCCChhHCcCHHHHh
Confidence 99999997654 57777653
No 204
>PHA02882 putative serine/threonine kinase; Provisional
Probab=29.69 E-value=2.1e+02 Score=27.85 Aligned_cols=65 Identities=18% Similarity=0.193 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHhcCCchh--h-hhccHH-----HHHHHHh------hhcCHHHHHHHHHHhccC--CcCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMA--V-QRENLQ-----TSIDLMA------RSYSADLRNLILYLLSVH--QKRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a--~-~~~n~~-----~sl~~~~------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~ 179 (487)
.+-|+-+||.+++.|+++..|= . ...++. .-+..+. ...+.++++.+...+.-. .+++.+++..
T Consensus 212 ~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 212 RRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 6789999999999999997662 1 111111 0111111 245677888887777544 3577777655
Q ss_pred H
Q psy1282 180 M 180 (487)
Q Consensus 180 ~ 180 (487)
.
T Consensus 292 ~ 292 (294)
T PHA02882 292 I 292 (294)
T ss_pred h
Confidence 4
No 205
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=29.62 E-value=1.4e+02 Score=29.46 Aligned_cols=21 Identities=10% Similarity=0.229 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHHHHhcCCch
Q psy1282 116 LQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~ 136 (487)
.+-|+-+||.++..|.++..+
T Consensus 189 ~~~DiwslG~~l~el~~g~~p 209 (328)
T cd08226 189 VKSDIYSVGITACELATGRVP 209 (328)
T ss_pred chhhHHHHHHHHHHHHhCCCC
Confidence 567999999999999988754
No 206
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=29.26 E-value=1.4e+02 Score=29.47 Aligned_cols=22 Identities=14% Similarity=0.194 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
..+-|+-+||.++..|+++..+
T Consensus 188 ~~~~DvwslGvil~el~~G~~~ 209 (336)
T cd07849 188 TKAIDIWSVGCILAEMLSNRPL 209 (336)
T ss_pred CcHHHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999998743
No 207
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=29.12 E-value=1.8e+02 Score=29.02 Aligned_cols=66 Identities=11% Similarity=0.082 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
-+.|+-+||.++..+.+ +..+-............+. ..+++++.+++...+...+ +.++.++...+
T Consensus 260 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l 336 (343)
T cd05103 260 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 336 (343)
T ss_pred chhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 46899999999999886 5433110011111111111 1368899999999986553 68999876654
No 208
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]
Probab=29.08 E-value=35 Score=33.37 Aligned_cols=28 Identities=29% Similarity=0.468 Sum_probs=24.4
Q ss_pred CCCcccChHHHHHHhhhccCCCcceEEEeecCC
Q psy1282 257 DGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289 (487)
Q Consensus 257 ~G~PvlDL~HVl~cLNKLDaG~dEKI~LvSRDE 289 (487)
.|+|.+| ||+.+|+| .++|-+..+|+.-
T Consensus 25 ~GkpLI~--~v~~al~~---~~d~i~v~isp~t 52 (177)
T COG2266 25 CGKPLID--RVLEALRK---IVDEIIVAISPHT 52 (177)
T ss_pred CCccHHH--HHHHHHHh---hcCcEEEEeCCCC
Confidence 4788864 89999999 8999999999974
No 209
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=29.06 E-value=86 Score=26.85 Aligned_cols=40 Identities=18% Similarity=0.440 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.++.|+.+||.+++.+ ..+.+++..++...+ +.++.+++.
T Consensus 172 ~~~~D~~~lg~~~~~l-------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~ 213 (215)
T cd00180 172 SEKSDIWSLGVILYEL-------------------------PELKDLIRKMLQKDPEKRPSAKEILE 213 (215)
T ss_pred CchhhhHHHHHHHHHH-------------------------HHHHHHHHHHhhCCcccCcCHHHHhh
Confidence 4788999999999998 567777888886543 577776653
No 210
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=28.75 E-value=49 Score=32.64 Aligned_cols=62 Identities=19% Similarity=0.196 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-----------hhcCHHHHHHHHHHhccCC-cCC-HHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-----------RSYSADLRNLILYLLSVHQ-KRT-VVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-----------~~yS~dl~~~i~~Lls~~~-~k~-i~~l~ 178 (487)
.+-|+-+||.++..|.++..+-.. .+.......+. ..+|++++++|.-|+..+. +.+ +.+++
T Consensus 209 ~~~DiwSlG~il~ell~g~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~dp~~R~~s~~~ll 283 (350)
T cd05573 209 LECDWWSLGVILYEMLYGFPPFYS-DTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLCDPEDRLGSFEEIK 283 (350)
T ss_pred CceeeEecchhhhhhccCCCCCCC-CCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHccChhhcCCCHHHHh
Confidence 577899999999999999865221 12222122111 1369999999999997432 455 77654
No 211
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=28.63 E-value=1.7e+02 Score=29.17 Aligned_cols=22 Identities=14% Similarity=0.238 Sum_probs=19.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
..+-|+-+||.++..|+++..+
T Consensus 193 ~~~~Dv~slGvil~el~~g~~p 214 (342)
T cd07879 193 NQTVDIWSVGCIMAEMLTGKTL 214 (342)
T ss_pred CchHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999998643
No 212
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=28.42 E-value=1.9e+02 Score=27.98 Aligned_cols=66 Identities=14% Similarity=0.118 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHHHHHHhcCC--chhhhhccHHHHHHHHh---------------hhcCHHHHHHHHHHhccCC--cCCHH
Q psy1282 115 DLQDDLTALGKLILAMTCRS--LMAVQRENLQTSIDLMA---------------RSYSADLRNLILYLLSVHQ--KRTVV 175 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~--~~a~~~~n~~~sl~~~~---------------~~yS~dl~~~i~~Lls~~~--~k~i~ 175 (487)
..+-|+-+||.++..|+++. .+ ....+..+.++.+. ..++.++++++...+...+ ++++.
T Consensus 218 ~~~~Dv~slG~~l~el~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~ 296 (304)
T cd05096 218 TTASDVWAFGVTLWEILMLCKEQP-YGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFS 296 (304)
T ss_pred CchhhhHHHHHHHHHHHHccCCCC-CCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHH
Confidence 46789999999999987532 22 11111112221111 1357889999999998654 78998
Q ss_pred HHHHHH
Q psy1282 176 DLMPMI 181 (487)
Q Consensus 176 ~l~~~I 181 (487)
++.+.|
T Consensus 297 ~i~~~l 302 (304)
T cd05096 297 DIHAFL 302 (304)
T ss_pred HHHHHH
Confidence 876554
No 213
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=28.29 E-value=1.9e+02 Score=27.13 Aligned_cols=22 Identities=14% Similarity=0.187 Sum_probs=18.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
+.+-|+-+||.+++.+.++..+
T Consensus 177 ~~~~Dv~slG~~l~~l~~~~~~ 198 (282)
T cd07829 177 STAVDIWSVGCIFAEMITGKPL 198 (282)
T ss_pred CccccHHHHHHHHHHHHhCCCC
Confidence 3568999999999999998643
No 214
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=28.18 E-value=2e+02 Score=27.39 Aligned_cols=21 Identities=14% Similarity=0.200 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHHHHHhcCCch
Q psy1282 116 LQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~ 136 (487)
.+-|+-+||.++..|.++..+
T Consensus 183 ~~~Dv~slG~il~~l~~g~~~ 203 (291)
T cd07844 183 TSLDMWGVGCIFYEMATGRPL 203 (291)
T ss_pred cHHHHHHHHHHHHHHHhCCCC
Confidence 567999999999999988644
No 215
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=28.17 E-value=1.4e+02 Score=28.69 Aligned_cols=22 Identities=14% Similarity=0.134 Sum_probs=18.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
..+-|+-+||.++..|+++..+
T Consensus 194 ~~~~Dv~slG~~l~~l~~~~~~ 215 (316)
T cd07842 194 TKAIDIWAIGCIFAELLTLEPI 215 (316)
T ss_pred CcHHHHHHHHHHHHHHHhcCCC
Confidence 3578999999999999997643
No 216
>PF00009 GTP_EFTU: Elongation factor Tu GTP binding domain; InterPro: IPR000795 Elongation factors belong to a family of proteins that promote the GTP-dependent binding of aminoacyl tRNA to the A site of ribosomes during protein biosynthesis, and catalyse the translocation of the synthesised protein chain from the A to the P site. The proteins are all relatively similar in the vicinity of their C-termini, and are also highly similar to a range of proteins that includes the nodulation Q protein from Rhizobium meliloti (Sinorhizobium meliloti), bacterial tetracycline resistance proteins [] and the omnipotent suppressor protein 2 from yeast. In both prokaryotes and eukaryotes, there are three distinct types of elongation factors, EF-1alpha (EF-Tu), which binds GTP and an aminoacyl-tRNAand delivers the latter to the A site of ribosomes; EF-1beta (EF-Ts), which interacts with EF-1a/EF-Tu to displace GDP and thus allows the regeneration of GTP-EF-1a; and EF-2 (EF-G), which binds GTP and peptidyl-tRNA and translocates the latter from the A site to the P site. In EF-1-alpha, a specific region has been shown [] to be involved in a conformational change mediated by the hydrolysis of GTP to GDP. This region is conserved in both EF-1alpha/EF-Tu as well as EF-2/EF-G and thus seems typical for GTP-dependent proteins which bind non-initiator tRNAs to the ribosome. The GTP-binding protein synthesis factor family also includes the eukaryotic peptide chain release factor GTP-binding subunits [] and prokaryotic peptide chain release factor 3 (RF-3) []; the prokaryotic GTP-binding protein lepA and its homologue in yeast (GUF1) and Caenorhabditis elegans (ZK1236.1); yeast HBS1 []; rat statin S1 []; and the prokaryotic selenocysteine-specific elongation factor selB [].; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 3IZW_C 1DG1_G 2BVN_B 3IZV_C 3MMP_C 1OB2_A 1EFU_A 3FIH_Z 3TR5_A 1TUI_C ....
Probab=28.10 E-value=1.4e+02 Score=27.56 Aligned_cols=89 Identities=15% Similarity=0.202 Sum_probs=52.2
Q ss_pred hhcccccCCC-CCcccChHHHHHHhhhc-cCCCcceEEEeecCCCeEEEEeHHHHHHHHHHHHHHHhhccCCCCCCCcce
Q psy1282 248 DYLLHQVQED-GRPWLDMSHIVHCLNKL-DAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPL 325 (487)
Q Consensus 248 DYVFHQVDe~-G~PvlDL~HVl~cLNKL-DaG~dEKI~LvSRDE~sclVVSYkELK~~id~aF~eL~~~s~ss~k~n~~~ 325 (487)
|.+.--||.+ |-- .+...++..+ ..|.+ -|..+..=..- .+++++.++.....+.+.....+......
T Consensus 95 D~ailvVda~~g~~----~~~~~~l~~~~~~~~p-~ivvlNK~D~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 164 (188)
T PF00009_consen 95 DIAILVVDANDGIQ----PQTEEHLKILRELGIP-IIVVLNKMDLI-----EKELEEIIEEIKEKLLKEYGENGEEIVPV 164 (188)
T ss_dssp SEEEEEEETTTBST----HHHHHHHHHHHHTT-S-EEEEEETCTSS-----HHHHHHHHHHHHHHHHHHTTSTTTSTEEE
T ss_pred ccceeeeecccccc----cccccccccccccccc-eEEeeeeccch-----hhhHHHHHHHHHHHhccccccCccccceE
Confidence 5555566664 422 2222233332 44555 55555543332 77888888877777765553333245677
Q ss_pred EeecCCCcCCHHHHhhhHHHH
Q psy1282 326 YLLSVHQKRTVVDLMPMIGAR 346 (487)
Q Consensus 326 ~Lls~~~~k~i~~l~~~i~~r 346 (487)
..+|.-...++++|+.+|...
T Consensus 165 i~~Sa~~g~gi~~Ll~~l~~~ 185 (188)
T PF00009_consen 165 IPISALTGDGIDELLEALVEL 185 (188)
T ss_dssp EEEBTTTTBTHHHHHHHHHHH
T ss_pred EEEecCCCCCHHHHHHHHHHh
Confidence 778876678999998887654
No 217
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=27.76 E-value=1.6e+02 Score=27.72 Aligned_cols=62 Identities=11% Similarity=0.122 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH--------hhhcCHHHHHHHHHHhccCC-cCCHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM--------ARSYSADLRNLILYLLSVHQ-KRTVVDL 177 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~--------~~~yS~dl~~~i~~Lls~~~-~k~i~~l 177 (487)
.+-|+-+||.++..|+++..+-............. -..+++++++.|..++.... +.+..++
T Consensus 188 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~r~~~~~~ 258 (264)
T cd06653 188 RKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFVEEKRRPTAEFL 258 (264)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhcCcccCccHHHH
Confidence 56799999999999999876532111122111111 12578889999988886543 4555543
No 218
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=27.73 E-value=1.7e+02 Score=27.91 Aligned_cols=65 Identities=17% Similarity=0.245 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhcc----------HHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQREN----------LQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTV 174 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n----------~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i 174 (487)
.+.|+-+||.+++.|.++..+--.... +...+..+. ..++.++.++|..++...+ +.++
T Consensus 181 ~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~ 260 (284)
T cd06620 181 VKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTP 260 (284)
T ss_pred ccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCH
Confidence 578999999999999988765211000 001111111 1277889999999997653 6888
Q ss_pred HHHHHH
Q psy1282 175 VDLMPM 180 (487)
Q Consensus 175 ~~l~~~ 180 (487)
.+++.+
T Consensus 261 ~e~~~~ 266 (284)
T cd06620 261 QQLCAM 266 (284)
T ss_pred HHHhcC
Confidence 877654
No 219
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=27.57 E-value=1.9e+02 Score=27.78 Aligned_cols=65 Identities=11% Similarity=0.117 Sum_probs=40.6
Q ss_pred hhHHHHHHHHHHHHHHh-cCCchhhhhccHHHHHHHHh------hhcCHHHHHHHHHHhccCC--cCCHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMT-CRSLMAVQRENLQTSIDLMA------RSYSADLRNLILYLLSVHQ--KRTVVDLMPM 180 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA-~~~~~a~~~~n~~~sl~~~~------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~ 180 (487)
..+-|+-+||.++++++ ++..+-.. .........+. ..++.+++++|..++...+ +.++.+++..
T Consensus 199 ~~~~Dv~slG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 199 STAADKWSFGTTLLEICFDGEVPLKE-RTPSEKERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCccc-cChHHHHHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 57899999999999985 34332111 11111111111 2366889999999997653 6888876543
No 220
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=27.56 E-value=1.6e+02 Score=29.21 Aligned_cols=62 Identities=18% Similarity=0.175 Sum_probs=40.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccH---------------------------HHHH-----------HHHhhhcCH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENL---------------------------QTSI-----------DLMARSYSA 156 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~---------------------------~~sl-----------~~~~~~yS~ 156 (487)
..+-|+-+||.++..|+++..+-. ..+. ...+ ..+.+.+|.
T Consensus 190 ~~~~Di~slG~~l~el~~g~~pf~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (334)
T cd07855 190 TTAIDMWSVGCIFAEMLGRRQLFP-GKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASP 268 (334)
T ss_pred ccccchHHHHHHHHHHHcCCCccC-CCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCH
Confidence 467899999999999998775411 0110 0000 112245789
Q ss_pred HHHHHHHHHhccCC--cCCHHHH
Q psy1282 157 DLRNLILYLLSVHQ--KRTVVDL 177 (487)
Q Consensus 157 dl~~~i~~Lls~~~--~k~i~~l 177 (487)
+++++|..++...+ +.++.++
T Consensus 269 ~~~~li~~~l~~~P~~Rpt~~~~ 291 (334)
T cd07855 269 EALDLLSQMLQFDPEERITVEQA 291 (334)
T ss_pred HHHHHHHHHccCChhhCcCHHHH
Confidence 99999999997654 5777654
No 221
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=27.55 E-value=1.9e+02 Score=28.28 Aligned_cols=22 Identities=14% Similarity=0.207 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
+.+-|+-+||.++..++++..+
T Consensus 185 ~~~sDi~slG~il~~l~~g~~p 206 (330)
T cd07834 185 TKAIDIWSVGCIFAELLTRKPL 206 (330)
T ss_pred CcchhHHHHHHHHHHHHcCCCC
Confidence 3578999999999999998754
No 222
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=27.38 E-value=2.8e+02 Score=26.91 Aligned_cols=65 Identities=12% Similarity=0.123 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccC--CcCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVH--QKRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I 181 (487)
.+-|+-+||.+++.|.+ +..+- ...+.....+.+.. .++.++.+++...+... .+.++.++...+
T Consensus 190 ~~~DiwslG~~l~el~t~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l 265 (303)
T cd05110 190 HQSDVWSYGVTIWELMTFGGKPY-DGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEF 265 (303)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 67899999999999876 44331 11122222333332 36788999988887654 368888865543
No 223
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=27.23 E-value=1.4e+02 Score=28.30 Aligned_cols=66 Identities=11% Similarity=0.181 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhh-cc--------------HHHHHHHHh--------hhcCHHHHHHHHHHhccCC--
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQR-EN--------------LQTSIDLMA--------RSYSADLRNLILYLLSVHQ-- 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~-~n--------------~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~-- 170 (487)
.+-|+-+||.+++.|.++......+ .. .....+.+. ..++.++.++|...+...+
T Consensus 190 ~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~ 269 (284)
T cd05081 190 VASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQ 269 (284)
T ss_pred hHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhh
Confidence 5789999999999999864221000 00 001112222 2467899999999998664
Q ss_pred cCCHHHHHHHH
Q psy1282 171 KRTVVDLMPMI 181 (487)
Q Consensus 171 ~k~i~~l~~~I 181 (487)
+.++.++...+
T Consensus 270 Rpt~~ei~~~l 280 (284)
T cd05081 270 RPSFSELALQV 280 (284)
T ss_pred CCCHHHHHHHH
Confidence 68888876544
No 224
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=27.13 E-value=1.5e+02 Score=27.91 Aligned_cols=63 Identities=13% Similarity=0.211 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH--------hhhcCHHHHHHHHHHhcc-CCcCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM--------ARSYSADLRNLILYLLSV-HQKRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~--------~~~yS~dl~~~i~~Lls~-~~~k~i~~l~ 178 (487)
-.-|+-+||.++..|+++..+....+......... ...++++++.++.-+... ..+.++++++
T Consensus 188 ~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~p~~Rp~~~eil 259 (266)
T cd06651 188 RKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFLGCIFVEARHRPSAEELL 259 (266)
T ss_pred chhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHHHHhcCChhhCcCHHHHh
Confidence 46799999999999999876532112222111111 124678888887655533 2467877764
No 225
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=26.69 E-value=3.1e+02 Score=25.65 Aligned_cols=65 Identities=9% Similarity=0.158 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccC--CcCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVH--QKRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I 181 (487)
-+-|+-+||-+++.+.+ +..+-.. .+.......+. ..++.++++++...+... .++++.+++..+
T Consensus 189 ~~~Dv~slG~il~ell~~g~~p~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l 264 (268)
T cd05063 189 SASDVWSFGIVMWEVMSFGERPYWD-MSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLL 264 (268)
T ss_pred hHhHHHHHHHHHHHHHhCCCCCCCc-CCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 46799999999999876 6654211 12222222222 136789999999998654 368888876554
No 226
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=26.64 E-value=1.9e+02 Score=29.24 Aligned_cols=22 Identities=14% Similarity=0.270 Sum_probs=18.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
..+-|+-+||.++..|.++..+
T Consensus 183 ~~~~DiwslG~il~el~~g~~p 204 (372)
T cd07853 183 TSAVDIWSVGCIFAELLGRRIL 204 (372)
T ss_pred CcHHHHHhHHHHHHHHHcCCCC
Confidence 3567999999999999998653
No 227
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=26.48 E-value=2.9e+02 Score=25.98 Aligned_cols=66 Identities=12% Similarity=0.162 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I 181 (487)
..+.|+-+||.++..+.+ +..+-.. .+.......+.+ .++.++++++..++...+ +.++.+++..+
T Consensus 187 ~~~~Dv~slG~~l~ell~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 263 (267)
T cd05066 187 TSASDVWSYGIVMWEVMSYGERPYWE-MSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSIL 263 (267)
T ss_pred CchhhhHHHHHHHHHHhcCCCCCccc-CCHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHH
Confidence 367899999999999654 6644211 111112222221 357899999999997654 68888876654
No 228
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=26.17 E-value=1.9e+02 Score=27.01 Aligned_cols=59 Identities=22% Similarity=0.251 Sum_probs=38.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH-------hhhcCHHHHHHHHHHhccCC--cCCH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM-------ARSYSADLRNLILYLLSVHQ--KRTV 174 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~-------~~~yS~dl~~~i~~Lls~~~--~k~i 174 (487)
..+-|+-+||.+++.|.++..+-..... ......+ ...++.++.++|..+++..+ +.+.
T Consensus 200 ~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~ 267 (280)
T cd05581 200 GKSSDLWALGCIIYQMLTGKPPFRGSNE-YLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGV 267 (280)
T ss_pred ChhhhHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence 3679999999999999998754211111 1111111 12467899999999997653 5666
No 229
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=25.95 E-value=2.6e+02 Score=29.46 Aligned_cols=68 Identities=10% Similarity=0.121 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMIG 182 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~ 182 (487)
..+-|+-+||.+++.+.+ +..+-..........+.+.+ .++.++++++..++...+ ++++.+++..+.
T Consensus 319 ~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~ 397 (401)
T cd05107 319 TTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVG 397 (401)
T ss_pred CcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 467899999999999886 43321000111111222222 468999999999997654 689999877764
No 230
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=25.80 E-value=1.9e+02 Score=28.87 Aligned_cols=21 Identities=14% Similarity=0.240 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHHHHhcCCch
Q psy1282 116 LQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~ 136 (487)
.+-|+-+||.++..|+++..+
T Consensus 197 ~~~DiwslG~il~el~~g~~p 217 (355)
T cd07874 197 ENVDIWSVGCIMGEMVRHKIL 217 (355)
T ss_pred chhhHHHHHHHHHHHHhCCCC
Confidence 578999999999999988643
No 231
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=25.79 E-value=1.4e+02 Score=29.54 Aligned_cols=58 Identities=12% Similarity=0.166 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC--cCCH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ--KRTV 174 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~--~k~i 174 (487)
.+-|+-+||.++..|.++..+- ...+..+.++.+. +.+|.+++++|..++...+ +.++
T Consensus 175 ~~~DiwslGvil~el~~g~~Pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~ 241 (316)
T cd05620 175 FSVDWWSFGVLLYEMLIGQSPF-HGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGV 241 (316)
T ss_pred cccchhhhHHHHHHHHhCCCCC-CCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCC
Confidence 4679999999999999987652 1223333333322 2479999999999998764 3444
No 232
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=25.66 E-value=81 Score=31.17 Aligned_cols=54 Identities=22% Similarity=0.335 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~ 170 (487)
.+-|+-+||.++..|+++..+-. ..+.....+.+. ..+|.+++++|..++...+
T Consensus 174 ~~~DiwSlG~il~elltg~~Pf~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP 234 (323)
T cd05571 174 RAVDWWGLGVVMYEMMCGRLPFY-NQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDP 234 (323)
T ss_pred ccccCcccchhhhhhhcCCCCCC-CCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCH
Confidence 56799999999999999876521 223333233222 3589999999999998764
No 233
>PRK11409 antitoxin YefM; Provisional
Probab=25.20 E-value=2e+02 Score=24.37 Aligned_cols=31 Identities=10% Similarity=0.296 Sum_probs=25.8
Q ss_pred CcceEEEeecCCCeEEEEeHHHHHHHHHHHH
Q psy1282 278 TQEKICLMSRDEQSVLVVSYAELKQCLDQSF 308 (487)
Q Consensus 278 ~dEKI~LvSRDE~sclVVSYkELK~~id~aF 308 (487)
..|-|.++.+++.+++++|.+|...+.+..+
T Consensus 23 ~~epv~ITr~g~~~~Vl~S~~~yesl~Etl~ 53 (83)
T PRK11409 23 DHAPILITRQNGEACVLMSLEEYNSLEETAY 53 (83)
T ss_pred cCCcEEEEeCCCCCEEEEeHHHHHHHHHHHH
Confidence 3677888888888999999999999888743
No 234
>PF00447 HSF_DNA-bind: HSF-type DNA-binding; InterPro: IPR000232 Heat shock factor (HSF) is a transcriptional activator of heat shock genes []: it binds specifically to heat shock promoter elements, which are palindromic sequences rich with repetitive purine and pyrimidine motifs []. Under normal conditions, HSF is a homo-trimeric cytoplasmic protein, but heat shock activation results in relocalisation to the nucleus []. Each HSF monomer contains one C-terminal and three N-terminal leucine zipper repeats []. Point mutations in these regions result in disruption of cellular localisation, rendering the protein constitutively nuclear []. Two sequences flanking the N-terminal zippers fit the consensus of a bi- partite nuclear localisation signal (NLS). Interaction between the N- and C-terminal zippers may result in a structure that masks the NLS sequences: following activation of HSF, these may then be unmasked, resulting in relocalisation of the protein to the nucleus []. The DNA-binding component of HSF lies to the N terminus of the first NLS region, and is referred to as the HSF domain.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1FBQ_B 1FYL_B 1FBS_A 1FYM_B 3HTS_B 2HTS_A 3HSF_A 1FBU_B 1FYK_A 2LDU_A ....
Probab=25.19 E-value=23 Score=30.44 Aligned_cols=28 Identities=36% Similarity=0.534 Sum_probs=23.7
Q ss_pred HHhhcccccCCCCCCCCCCCcccchhHH
Q psy1282 216 LVKLGTINERPELNLDPTWSETGDRYML 243 (487)
Q Consensus 216 L~KL~fI~eRpE~~~D~~WSEtGdRYlL 243 (487)
+.||=-|.+.|++..-.+|++.|+.++|
T Consensus 3 ~~kL~~~l~~~~~~~~I~W~~~G~~fiI 30 (103)
T PF00447_consen 3 LSKLYEMLEDPENSDIIRWSPDGDSFII 30 (103)
T ss_dssp HHHHHHHHCTTTTTTTCEECTTSSEEEE
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCEEEE
Confidence 5677777888999888999999999876
No 235
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=25.12 E-value=1.6e+02 Score=29.18 Aligned_cols=59 Identities=12% Similarity=0.144 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC--cCCHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ--KRTVV 175 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~--~k~i~ 175 (487)
.+-|+-+||.++..|+++..+- ...+....++.+. ..+|.+++++|..++...+ +.++.
T Consensus 175 ~~~DvwslG~il~el~~G~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 242 (316)
T cd05619 175 TSVDWWSFGVLLYEMLIGQSPF-HGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGVK 242 (316)
T ss_pred chhhhhhHHHHHHHHHhCCCCC-CCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcCCCh
Confidence 5689999999999999987652 1122222222222 2478999999999998664 34553
No 236
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=25.06 E-value=1.2e+02 Score=29.90 Aligned_cols=54 Identities=15% Similarity=0.142 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhh-------hcCHHHHHHHHHHhccCC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMAR-------SYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~-------~yS~dl~~~i~~Lls~~~ 170 (487)
.+-|+-+||.++..|.++..+- ...+....++.+.+ .+|.+++++|.-++...+
T Consensus 175 ~~~DvwslG~il~el~tg~~Pf-~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp 235 (321)
T cd05591 175 PSVDWWALGVLMYEMMAGQPPF-EADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNP 235 (321)
T ss_pred CccceechhHHHHHHhcCCCCC-CCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCH
Confidence 4679999999999999987652 12233333333322 368999999999998764
No 237
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=24.98 E-value=1.9e+02 Score=28.62 Aligned_cols=22 Identities=9% Similarity=0.182 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
.++-|+-+||.++..|+++..+
T Consensus 194 ~~~~DiwslG~il~el~~g~~p 215 (343)
T cd07878 194 NQTVDIWSVGCIMAELLKGKAL 215 (343)
T ss_pred CchhhhHhHHHHHHHHHHCCCC
Confidence 4678999999999999998643
No 238
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=24.82 E-value=3e+02 Score=26.28 Aligned_cols=65 Identities=14% Similarity=0.122 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccC--CcCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVH--QKRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I 181 (487)
.+-|+-+||.+++.|.+ +..+- .........+.+. ..++.++++++...+... .+.++.+++..+
T Consensus 190 ~~~Dv~slG~il~el~t~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l 265 (279)
T cd05111 190 HQSDVWSYGVTVWEMMSYGAEPY-AGMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEF 265 (279)
T ss_pred chhhHHHHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 56899999999999987 65432 1112222222222 136778899888777654 368999875543
No 239
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=24.57 E-value=38 Score=33.35 Aligned_cols=61 Identities=18% Similarity=0.163 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-----------hhcCHHHHHHHHHHhccCC-cCCHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-----------RSYSADLRNLILYLLSVHQ-KRTVVDL 177 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-----------~~yS~dl~~~i~~Lls~~~-~k~i~~l 177 (487)
.+-|+-+||.++..|+++..+- ...+....+..+. ..+|.+++++|..|+..+. +.+++++
T Consensus 188 ~~~DiwslG~il~el~~g~~Pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~~p~~R~t~~~l 260 (330)
T cd05601 188 VECDWWSLGVIAYEMIYGRSPF-HEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLCGQKERLGYEGL 260 (330)
T ss_pred CcceeecccceeeeeccCCCCC-CCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHccChhhCCCHHHH
Confidence 5679999999999999987652 1122222222221 1479999999999997432 5777664
No 240
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=24.48 E-value=2.7e+02 Score=26.58 Aligned_cols=21 Identities=14% Similarity=0.069 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHHHHhcCCch
Q psy1282 116 LQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~ 136 (487)
-+-|+-+||.++..|+++..+
T Consensus 183 ~~~Dv~slG~~l~~l~~g~~~ 203 (291)
T cd07870 183 SALDIWGAGCIFIEMLQGQPA 203 (291)
T ss_pred cHHHHHHHHHHHHHHHhCCCC
Confidence 467999999999999998754
No 241
>KOG1165|consensus
Probab=24.38 E-value=1.5e+02 Score=32.40 Aligned_cols=82 Identities=22% Similarity=0.384 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHHHHHhcCCch--hhhhccHHHHHHHHhhhcCHHHHHHHHHHhccCCcCCHHHHHHHHHHHHHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLM--AVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQ 193 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~--a~~~~n~~~sl~~~~~~yS~dl~~~i~~Lls~~~~k~i~~l~~~I~~r~~~~~d~~~ 193 (487)
.|+||.+||.+.+-.--|+++ ++..+|..+-.+-|. .+...-.|.+||..+-..|
T Consensus 215 RRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIG---------------e~Kr~T~i~~Lc~g~P~ef-------- 271 (449)
T KOG1165|consen 215 RRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIG---------------ETKRSTPIEVLCEGFPEEF-------- 271 (449)
T ss_pred hhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhc---------------cccccCCHHHHHhcCHHHH--------
Confidence 899999999999999888876 232333333333332 0112357888877765554
Q ss_pred hhhhhHHHHHHHHhhhchHHHHHHhhcccccCCCCCCCCCCCcccchhHHHhhhh
Q psy1282 194 LHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRD 248 (487)
Q Consensus 194 ~~~D~lE~eLs~ElENGRLfRLL~KL~fI~eRpE~~~D~~WSEtGdRYlLKLFRD 248 (487)
++-+|..-.|.| .|-|+++ |+.+||-|
T Consensus 272 ----------------a~Yl~yvR~L~F-~E~PDYd-----------ylr~Lf~d 298 (449)
T KOG1165|consen 272 ----------------ATYLRYVRRLDF-FETPDYD-----------YLRKLFDD 298 (449)
T ss_pred ----------------HHHHHHHHhcCc-ccCCCHH-----------HHHHHHHH
Confidence 334455556666 5667763 89999865
No 242
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=24.25 E-value=1.7e+02 Score=27.44 Aligned_cols=66 Identities=11% Similarity=0.195 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhh-c-------------cHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--c
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQR-E-------------NLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--K 171 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~-~-------------n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~ 171 (487)
...|+-+||.+++.|.++..+.-.. . ......+.+.+ .++.++.+++..++...+ +
T Consensus 191 ~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 270 (284)
T cd05038 191 SASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDR 270 (284)
T ss_pred cccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhC
Confidence 4679999999999999876432110 0 01222222221 356789999999997653 6
Q ss_pred CCHHHHHHHH
Q psy1282 172 RTVVDLMPMI 181 (487)
Q Consensus 172 k~i~~l~~~I 181 (487)
.++.++..++
T Consensus 271 pt~~ei~~~l 280 (284)
T cd05038 271 PSFADLILIV 280 (284)
T ss_pred CCHHHHHHHH
Confidence 8888876654
No 243
>PHA03369 capsid maturational protease; Provisional
Probab=24.21 E-value=1.7e+02 Score=33.76 Aligned_cols=40 Identities=20% Similarity=0.381 Sum_probs=23.7
Q ss_pred CCCccCChhHHHHHHHHhHhhhhccCCCCCCCCchhhhhhh------hhHHHHHHHHHHHH
Q psy1282 74 HSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYH------DLQDDLTALGKLIL 128 (487)
Q Consensus 74 ~~sFFm~~~lR~Ell~k~~~t~~~~dp~~~~~lP~~vd~yh------~QqeDl~~lG~LiL 128 (487)
.....|++++-. ..++++|++.-+-. +-.||++.+++++-
T Consensus 441 t~~~~m~~~man---------------mv~~~~~~~~~~erkrkr~~el~ee~i~~~k~~k 486 (663)
T PHA03369 441 TNPYVMPISMAN---------------MVYPGHPQEHGHERKRKRGGELKEELIETLKLVK 486 (663)
T ss_pred CchhhhHHHHhc---------------cCCccCcchhhhhhhccccccccHHHHHHHHHHH
Confidence 345778777654 56778888665421 13456665555543
No 244
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=24.10 E-value=2.6e+02 Score=27.19 Aligned_cols=63 Identities=17% Similarity=0.255 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh----------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA----------RSYSADLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
.+-|+-+||.++..|+++..+-. ..+..+.+..+. ..++.++.+++..++...+ +.++.+++.
T Consensus 195 ~~~Dv~slGvil~el~tg~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 195 PEVDIWSLGIMVIEMVDGEPPYF-NEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred chhhHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 67899999999999999876421 111111112111 2468899999999987664 577776543
No 245
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=24.02 E-value=1.4e+02 Score=29.55 Aligned_cols=66 Identities=14% Similarity=0.144 Sum_probs=42.2
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchhhhhc------------------cH--------H-----------HHHHHHhhhcCH
Q psy1282 114 HDLQDDLTALGKLILAMTCRSLMAVQRE------------------NL--------Q-----------TSIDLMARSYSA 156 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~~~~a~~~~------------------n~--------~-----------~sl~~~~~~yS~ 156 (487)
.+.+-|+-+||.++..|.++..+-...+ .. . .........+|.
T Consensus 186 ~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (337)
T cd07858 186 YTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANP 265 (337)
T ss_pred CCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCH
Confidence 4467999999999999998864311000 00 0 001112235789
Q ss_pred HHHHHHHHHhccCC--cCCHHHHHH
Q psy1282 157 DLRNLILYLLSVHQ--KRTVVDLMP 179 (487)
Q Consensus 157 dl~~~i~~Lls~~~--~k~i~~l~~ 179 (487)
+++++|..++...+ +.++.+++.
T Consensus 266 ~~~~li~~~l~~~P~~Rps~~ell~ 290 (337)
T cd07858 266 LAIDLLEKMLVFDPSKRITVEEALA 290 (337)
T ss_pred HHHHHHHHHhcCChhhccCHHHHHc
Confidence 99999999998654 577777543
No 246
>PF13986 DUF4224: Domain of unknown function (DUF4224)
Probab=23.95 E-value=38 Score=26.04 Aligned_cols=21 Identities=38% Similarity=0.634 Sum_probs=18.4
Q ss_pred hhhcccccCCCCCcccChHHH
Q psy1282 247 RDYLLHQVQEDGRPWLDMSHI 267 (487)
Q Consensus 247 RDYVFHQVDe~G~PvlDL~HV 267 (487)
+.-++|.++.+|+|++=++||
T Consensus 26 ~~Gi~~~~~~~G~p~V~r~~v 46 (47)
T PF13986_consen 26 RNGIPFVVRADGRPIVTRSHV 46 (47)
T ss_pred HCCCeeEECCCCCEEeeHHHh
Confidence 456889999999999999886
No 247
>COG4136 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=23.85 E-value=20 Score=35.14 Aligned_cols=31 Identities=23% Similarity=0.494 Sum_probs=25.4
Q ss_pred CchHHHhhhhhcccccCCCCCccccHhHHHH
Q psy1282 401 DRYMLKLFRDYLLHQVQEDGRPWLDMSHIVH 431 (487)
Q Consensus 401 dry~lkLFrDyvFHQvd~~G~pvlDl~HVl~ 431 (487)
|.-+=.=||++||.++.+-|-|.+-..|=.+
T Consensus 166 D~ALR~qfR~wVFs~~r~agiPtv~VTHD~~ 196 (213)
T COG4136 166 DVALRDQFRQWVFSEVRAAGIPTVQVTHDLQ 196 (213)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEecccc
Confidence 4455567999999999999999998888543
No 248
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=23.74 E-value=2.2e+02 Score=28.51 Aligned_cols=22 Identities=9% Similarity=0.211 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
..+-|+-+||.++..|+++..+
T Consensus 196 ~~~~DvwslG~il~el~~g~~p 217 (345)
T cd07877 196 NQTVDIWSVGCIMAELLTGRTL 217 (345)
T ss_pred CchhhHHHHHHHHHHHHhCCCC
Confidence 3678999999999999988653
No 249
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=23.65 E-value=1.1e+02 Score=30.49 Aligned_cols=54 Identities=26% Similarity=0.343 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~ 170 (487)
.+-|+-+||.++..|.++..+-. ..+..+..+.+. ..+|.+++++|..++...+
T Consensus 174 ~~~DiwslGvil~elltG~~Pf~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP 234 (328)
T cd05593 174 RAVDWWGLGVVMYEMMCGRLPFY-NQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDP 234 (328)
T ss_pred ccCCccccchHHHHHhhCCCCCC-CCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCH
Confidence 56799999999999999876521 122233233222 3589999999999998764
No 250
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=23.55 E-value=1e+02 Score=29.48 Aligned_cols=63 Identities=13% Similarity=0.175 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhh--cc--HHHHHHHH------hhhcCHHHHHHHHHHhccCC--cC-CHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQR--EN--LQTSIDLM------ARSYSADLRNLILYLLSVHQ--KR-TVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~--~n--~~~sl~~~------~~~yS~dl~~~i~~Lls~~~--~k-~i~~l~ 178 (487)
-+-|+-+||.++..|+++..+--.. +. ..+-.... -+.+|++++++|..++...+ +. ++++++
T Consensus 185 ~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 185 VSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred chhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 4579999999999999987652111 11 11111111 12589999999999998664 33 456553
No 251
>KOG0616|consensus
Probab=23.32 E-value=1.5e+02 Score=31.79 Aligned_cols=53 Identities=26% Similarity=0.239 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVH 169 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~ 169 (487)
..-|.-+||.||..+++|-+|=. ..|.-+..+-+. +.||.+++++|.-||.-.
T Consensus 220 kavDWWalGVLIYEMlaG~pPF~-~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD 279 (355)
T KOG0616|consen 220 KAVDWWALGVLIYEMLAGYPPFY-DDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVD 279 (355)
T ss_pred cchhHHHHHHHHHHHHcCCCCCc-CCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhh
Confidence 67899999999999999987632 233322222222 478999999999999643
No 252
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=23.15 E-value=2e+02 Score=28.28 Aligned_cols=26 Identities=12% Similarity=0.319 Sum_probs=20.8
Q ss_pred hcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 153 SYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 153 ~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+|++++++|..++...+ +.++++++
T Consensus 278 ~~~~~~~~li~~~l~~dP~~Rpt~~ell 305 (327)
T cd08227 278 TFSPHFHHFVEQCLQRNPDARPSASTLL 305 (327)
T ss_pred ccCHHHHHHHHHHHhhCchhcCCHHHHh
Confidence 578899999999997654 68888764
No 253
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=22.94 E-value=2.1e+02 Score=28.64 Aligned_cols=21 Identities=14% Similarity=0.194 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHHHhcCCch
Q psy1282 116 LQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~ 136 (487)
.+-|+-+||.++..|+++..+
T Consensus 201 ~~~DiwSlG~il~el~tg~~p 221 (359)
T cd07876 201 ENVDIWSVGCIMGELVKGSVI 221 (359)
T ss_pred cchhhHHHHHHHHHHHhCCCC
Confidence 568999999999999998753
No 254
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=22.91 E-value=2.5e+02 Score=26.97 Aligned_cols=65 Identities=11% Similarity=0.124 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHHHhc--CCchhhhhccHHHHHHHHh---------------hhcCHHHHHHHHHHhccCC--cCCHHH
Q psy1282 116 LQDDLTALGKLILAMTC--RSLMAVQRENLQTSIDLMA---------------RSYSADLRNLILYLLSVHQ--KRTVVD 176 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~--~~~~a~~~~n~~~sl~~~~---------------~~yS~dl~~~i~~Lls~~~--~k~i~~ 176 (487)
-+-|+-+||.++..+++ +..+- ...+..+.++.+. ..++..+++++...+...+ +.++.+
T Consensus 211 ~~~DiwSlG~~l~el~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ 289 (296)
T cd05095 211 TASDVWAFGVTLWEILTLCKEQPY-SQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQE 289 (296)
T ss_pred chhhhhHHHHHHHHHHHhCCCCCc-cccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHH
Confidence 57899999999999987 33221 1111112111110 2367899999999997654 688888
Q ss_pred HHHHH
Q psy1282 177 LMPMI 181 (487)
Q Consensus 177 l~~~I 181 (487)
+...+
T Consensus 290 i~~~l 294 (296)
T cd05095 290 IHATL 294 (296)
T ss_pred HHHHH
Confidence 76554
No 255
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=22.84 E-value=1.9e+02 Score=29.14 Aligned_cols=62 Identities=18% Similarity=0.122 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-----------hhcCHHHHHHHHHHhccCC----cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-----------RSYSADLRNLILYLLSVHQ----KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-----------~~yS~dl~~~i~~Lls~~~----~k~i~~l~ 178 (487)
.+-|+-+||.++..|++|..+-. ..+.......+. ..+|++++++|.-|+.... +.++++++
T Consensus 215 ~~~DvwSlGvil~ell~G~~Pf~-~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~ 291 (363)
T cd05628 215 KLCDWWSLGVIMYEMLIGYPPFC-SETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIK 291 (363)
T ss_pred CchhhhhhHHHHHHHHhCCCCCC-CCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHh
Confidence 46799999999999999976521 122222222222 1368999999888765322 24676653
No 256
>PRK11409 antitoxin YefM; Provisional
Probab=22.77 E-value=1.6e+02 Score=24.88 Aligned_cols=31 Identities=10% Similarity=0.296 Sum_probs=26.1
Q ss_pred CcceEEeeecCCCeEEEEehHHHHHHHHHHH
Q psy1282 440 TQEKICLMSRDEQSVLVVSYAELKQCLDQSF 470 (487)
Q Consensus 440 ~~Eki~LvSrDe~~~lvvSY~elK~~id~aF 470 (487)
..|-|.++.+++.+++++|.+|...+.++.+
T Consensus 23 ~~epv~ITr~g~~~~Vl~S~~~yesl~Etl~ 53 (83)
T PRK11409 23 DHAPILITRQNGEACVLMSLEEYNSLEETAY 53 (83)
T ss_pred cCCcEEEEeCCCCCEEEEeHHHHHHHHHHHH
Confidence 3577778878888999999999999988866
No 257
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=22.58 E-value=3.8e+02 Score=26.15 Aligned_cols=65 Identities=9% Similarity=0.084 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccC--CcCCHHHHHHHH
Q psy1282 116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVH--QKRTVVDLMPMI 181 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I 181 (487)
.+-|+-+||.++..|.+ +..+- ...+..+-...+. ..++.++.+++...+... .++++.+++..+
T Consensus 190 ~~~Di~slGv~l~el~t~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l 265 (316)
T cd05108 190 HQSDVWSYGVTVWELMTFGSKPY-DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 265 (316)
T ss_pred chhhhHHHHHHHHHHHcCCCCCC-CCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 67899999999999875 55431 1111111111111 246889999999988754 368888876554
No 258
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=22.45 E-value=1.4e+02 Score=29.73 Aligned_cols=55 Identities=13% Similarity=0.115 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~ 170 (487)
..+-|+-+||.++..|.++..+-. ..+.....+.+. ..+|.+++++|..+|...+
T Consensus 193 ~~~~DiwslG~il~elltg~~pf~-~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP 254 (329)
T PTZ00263 193 GKAVDWWTMGVLLYEFIAGYPPFF-DDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDH 254 (329)
T ss_pred CCcceeechHHHHHHHHcCCCCCC-CCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHHHhhcCH
Confidence 367899999999999999876521 222223333332 2489999999999998765
No 259
>smart00415 HSF heat shock factor.
Probab=22.45 E-value=28 Score=30.35 Aligned_cols=29 Identities=28% Similarity=0.544 Sum_probs=24.4
Q ss_pred HHHhhcccccCCCCCCCCCCCcccCchHH
Q psy1282 377 LLVKLGTINERPELNLDPTWSETGDRYML 405 (487)
Q Consensus 377 Ll~KL~~I~eRpe~~~d~~WsEtGdry~l 405 (487)
-++||=-|.+.|++..-..|++.|+.++|
T Consensus 5 F~~kL~~~l~~~~~~~iI~W~~~G~~f~I 33 (105)
T smart00415 5 FLTKLYLLVEDPSTDKIISWSPSGKSFVI 33 (105)
T ss_pred HHHHHHHHHhCCCCCCEEEECCCCCEEEE
Confidence 36788888899999888899999997665
No 260
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=22.28 E-value=2.6e+02 Score=27.61 Aligned_cols=20 Identities=15% Similarity=0.072 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHHHHhcCCc
Q psy1282 116 LQDDLTALGKLILAMTCRSL 135 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~ 135 (487)
.+-|+-+||.++..|.++..
T Consensus 192 ~~sDi~slG~~l~el~tg~~ 211 (337)
T cd07852 192 KGVDMWSVGCILGEMLLGKP 211 (337)
T ss_pred ccchHHHHHHHHHHHHhCCC
Confidence 56899999999999999864
No 261
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=22.22 E-value=3.7e+02 Score=25.48 Aligned_cols=67 Identities=7% Similarity=0.109 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHHHHHhc-CCchh--hhhccHHHHHHHHh-----hhcCHHHHHHHHHHhccC--CcCCHHHHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTC-RSLMA--VQRENLQTSIDLMA-----RSYSADLRNLILYLLSVH--QKRTVVDLMPMI 181 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~-~~~~a--~~~~n~~~sl~~~~-----~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I 181 (487)
..+-|+-+||.+++.|++ +..+- ...+.+.+.+..-. ..++.++++++...+... .++++.+++..+
T Consensus 189 ~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l 265 (279)
T cd05057 189 THKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEF 265 (279)
T ss_pred CchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 367999999999999997 55431 11112222221100 136788999888887655 367887764443
No 262
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=22.21 E-value=2.8e+02 Score=27.63 Aligned_cols=22 Identities=18% Similarity=0.232 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
..+-|+-+||.++..|+++..+
T Consensus 184 ~~~~Dv~slG~il~el~tg~~~ 205 (328)
T cd07856 184 DVEVDIWSAGCIFAEMLEGKPL 205 (328)
T ss_pred CcHHHHHHHHHHHHHHHhCCCC
Confidence 4679999999999999998643
No 263
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=22.05 E-value=2.6e+02 Score=25.87 Aligned_cols=64 Identities=17% Similarity=0.195 Sum_probs=40.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhh-ccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQR-ENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~-~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
..+-|+-+||.+++.+.++..+-... .+......... ..++.+++++|..++...+ +.+..+++
T Consensus 184 ~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~ 259 (264)
T cd06626 184 GRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELL 259 (264)
T ss_pred CcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 35679999999999999987652111 11111111111 1248899999999997654 57777654
No 264
>PF13986 DUF4224: Domain of unknown function (DUF4224)
Probab=22.01 E-value=46 Score=25.59 Aligned_cols=19 Identities=37% Similarity=0.580 Sum_probs=16.6
Q ss_pred hcccccCCCCCccccHhHH
Q psy1282 411 YLLHQVQEDGRPWLDMSHI 429 (487)
Q Consensus 411 yvFHQvd~~G~pvlDl~HV 429 (487)
=++|.++.+|+|++=++||
T Consensus 28 Gi~~~~~~~G~p~V~r~~v 46 (47)
T PF13986_consen 28 GIPFVVRADGRPIVTRSHV 46 (47)
T ss_pred CCeeEECCCCCEEeeHHHh
Confidence 4678999999999999886
No 265
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]
Probab=21.94 E-value=78 Score=32.31 Aligned_cols=55 Identities=33% Similarity=0.569 Sum_probs=39.7
Q ss_pred hhhcccccCCCCCcc---ccHhHHHHhccccCCCCcceEEeeecCCCeEEEEehHH-------HHHHHHHHHH-HHHhcC
Q psy1282 409 RDYLLHQVQEDGRPW---LDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAE-------LKQCLDQSFH-ELSSSA 477 (487)
Q Consensus 409 rDyvFHQvd~~G~pv---lDl~HVl~cLNKLDaG~~Eki~LvSrDe~~~lvvSY~e-------lK~~id~aF~-~L~~~a 477 (487)
-|-||--+|++|+|| +||+.|+ ||+ |||.|-| +|+-+|+.+. ++.-+|
T Consensus 39 ~~iV~~vlD~d~~Pvag~~~~advV------------------RDG---iVvdf~eaveiVrrlkd~lEk~lGi~~tha~ 97 (277)
T COG4820 39 CDIVSMVLDRDGQPVAGCLDWADVV------------------RDG---IVVDFFEAVEIVRRLKDTLEKQLGIRFTHAA 97 (277)
T ss_pred ceEEEEEEcCCCCeEEEEehhhhhh------------------ccc---eEEehhhHHHHHHHHHHHHHHhhCeEeeecc
Confidence 367899999999997 5777765 776 8888866 4555566665 556677
Q ss_pred CCCCCCC
Q psy1282 478 SLTPKST 484 (487)
Q Consensus 478 ~~~~~~~ 484 (487)
.++|.-+
T Consensus 98 taiPPGt 104 (277)
T COG4820 98 TAIPPGT 104 (277)
T ss_pred ccCCCCc
Confidence 7777654
No 266
>COG4136 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=21.81 E-value=20 Score=35.07 Aligned_cols=31 Identities=23% Similarity=0.494 Sum_probs=25.2
Q ss_pred chhHHHhhhhhcccccCCCCCcccChHHHHH
Q psy1282 239 DRYMLKLFRDYLLHQVQEDGRPWLDMSHIVH 269 (487)
Q Consensus 239 dRYlLKLFRDYVFHQVDe~G~PvlDL~HVl~ 269 (487)
|.-+=.=||++||.++.+-|-|.+-..|=.+
T Consensus 166 D~ALR~qfR~wVFs~~r~agiPtv~VTHD~~ 196 (213)
T COG4136 166 DVALRDQFRQWVFSEVRAAGIPTVQVTHDLQ 196 (213)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEecccc
Confidence 4455567999999999999999998887543
No 267
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=21.65 E-value=2.4e+02 Score=26.47 Aligned_cols=63 Identities=11% Similarity=0.186 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhc-cCCcCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLS-VHQKRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls-~~~~k~i~~l~ 178 (487)
.+.|+-+||.++..|+++..+-..........+... +.++..+.++|.-++. +..+.+++++.
T Consensus 188 ~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~p~~Rp~~~~il 259 (265)
T cd06652 188 RKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFVEAKLRPSADELL 259 (265)
T ss_pred cchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcChhhCCCHHHHh
Confidence 467999999999999998765211111111111111 2356666666655553 22356666653
No 268
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=21.60 E-value=51 Score=32.35 Aligned_cols=54 Identities=22% Similarity=0.225 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~ 170 (487)
.+-|+-+||.++..|+++..+- ...+..+....+. ..+|++++++|.-++...+
T Consensus 172 ~~~DvwslGvil~el~tg~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp 232 (312)
T cd05585 172 KAVDWWTLGVLLYEMLTGLPPF-YDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDP 232 (312)
T ss_pred CccceechhHHHHHHHhCCCCc-CCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCH
Confidence 5679999999999999997652 1223333333222 3588999999999998765
No 269
>PF14377 DUF4414: Domain of unknown function (DUF4414)
Probab=21.51 E-value=40 Score=29.63 Aligned_cols=16 Identities=25% Similarity=0.453 Sum_probs=14.1
Q ss_pred CChhHHHHHHHHhHhh
Q psy1282 79 MSENIRAEIQHKNALT 94 (487)
Q Consensus 79 m~~~lR~Ell~k~~~t 94 (487)
+|+++|+|++..+.-.
T Consensus 9 LPeDiR~Evl~~~~~~ 24 (108)
T PF14377_consen 9 LPEDIREEVLAQQQRE 24 (108)
T ss_pred CCHHHHHHHHHHHHhh
Confidence 6999999999998764
No 270
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=21.49 E-value=1.5e+02 Score=29.40 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~ 170 (487)
.+-|+-+||.++..|+++..+- ...+....++.+. ..+|.+++++|..++...+
T Consensus 175 ~~~DiwslG~il~el~~g~~Pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP 235 (320)
T cd05590 175 PSVDWWAMGVLLYEMLCGHAPF-EAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNP 235 (320)
T ss_pred CccchhhhHHHHHHHhhCCCCC-CCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCH
Confidence 4679999999999999987652 1223333333332 2479999999999998664
No 271
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=21.30 E-value=85 Score=31.78 Aligned_cols=62 Identities=15% Similarity=0.138 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-----------hhcCHHHHHHHHHHhccCC----cCCHHHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-----------RSYSADLRNLILYLLSVHQ----KRTVVDLM 178 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-----------~~yS~dl~~~i~~Lls~~~----~k~i~~l~ 178 (487)
.+-|+-+||.++..|.++..+-. ..+.......+. ..+|.+++++|..||.... +.++.+++
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~-~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~~~~~r~~r~~~~~~l 303 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFC-SENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLITNAENRLGRGGAHEIK 303 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCC-CCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHh
Confidence 45688899999999999876521 112222122111 1478999999999986332 23666643
No 272
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=21.04 E-value=3.1e+02 Score=25.32 Aligned_cols=67 Identities=12% Similarity=0.132 Sum_probs=40.1
Q ss_pred hhhHHHHHHHHHHHHHHhcC-CchhhhhccHHHHHHHHh------hhcCHHHHHHHHHHhccC--CcCCHHHHHHHH
Q psy1282 114 HDLQDDLTALGKLILAMTCR-SLMAVQRENLQTSIDLMA------RSYSADLRNLILYLLSVH--QKRTVVDLMPMI 181 (487)
Q Consensus 114 h~QqeDl~~lG~LiLaLA~~-~~~a~~~~n~~~sl~~~~------~~yS~dl~~~i~~Lls~~--~~k~i~~l~~~I 181 (487)
.+.+-|+-+||.+++.|.++ ..+ ....+...-..... ..-+.+++++|...+... .++++.+++..+
T Consensus 183 ~~~~~Di~slG~~~~~l~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 183 LTIAADKWSFGTTLLEICSNGEEP-LSTLSSSEKERFYQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred cchhhHHHHHHHHHHHHHhCCCCC-cccCCchhHHHHHhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 35678999999999999875 322 11111111111111 112478889999988654 368888776543
No 273
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=20.71 E-value=2.8e+02 Score=27.66 Aligned_cols=26 Identities=15% Similarity=0.344 Sum_probs=21.0
Q ss_pred hcCHHHHHHHHHHhccCC--cCCHHHHH
Q psy1282 153 SYSADLRNLILYLLSVHQ--KRTVVDLM 178 (487)
Q Consensus 153 ~yS~dl~~~i~~Lls~~~--~k~i~~l~ 178 (487)
.+|.+++++|..++...+ +.++.+++
T Consensus 270 ~~~~~~~~li~~~L~~~P~~Rpt~~ell 297 (333)
T cd06650 270 VFGAEFQDFVNKCLIKNPAERADLKQLM 297 (333)
T ss_pred CcCHHHHHHHHHhccCCcccCcCHHHHh
Confidence 378999999999997654 68888764
No 274
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=20.66 E-value=2.2e+02 Score=27.28 Aligned_cols=55 Identities=18% Similarity=0.146 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhh-c--cHHHHHHHH-------hhhcCHHHHHHHHHHhccCC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQR-E--NLQTSIDLM-------ARSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~-~--n~~~sl~~~-------~~~yS~dl~~~i~~Lls~~~ 170 (487)
.+-|+-+||.++..|.++..+-... . ........+ ...+|.++++++..++...+
T Consensus 176 ~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 240 (280)
T cd05608 176 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDP 240 (280)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCH
Confidence 5789999999999999987542110 0 111111111 13589999999999997664
No 275
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=20.62 E-value=1.4e+02 Score=28.85 Aligned_cols=55 Identities=27% Similarity=0.324 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhh------ccHHHHHH----HHhhhcCHHHHHHHHHHhccCC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQR------ENLQTSID----LMARSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~------~n~~~sl~----~~~~~yS~dl~~~i~~Lls~~~ 170 (487)
-+-|+-+||.++..|+++..+-... .......+ .....+++++++++..++...+
T Consensus 180 ~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 244 (285)
T cd05630 180 FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDP 244 (285)
T ss_pred CccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCH
Confidence 3579999999999999987652110 11111111 1224689999999999998764
No 276
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=20.30 E-value=3.2e+02 Score=26.11 Aligned_cols=21 Identities=10% Similarity=0.161 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHHHHHhcCCc
Q psy1282 115 DLQDDLTALGKLILAMTCRSL 135 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~ 135 (487)
+.+-|+-+||.++..|.++..
T Consensus 185 ~~~~Di~slG~~l~~l~~g~~ 205 (293)
T cd07843 185 STAIDMWSVGCIFAELLTKKP 205 (293)
T ss_pred cchhhHHHHHHHHHHHHhCCC
Confidence 467899999999999999864
No 277
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=20.29 E-value=1.6e+02 Score=29.13 Aligned_cols=54 Identities=24% Similarity=0.255 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~ 170 (487)
.+-|+-+||.++..|.++..+- ...+..+.++.+. ..+|++++++|..++...+
T Consensus 179 ~~~DiwslG~il~ell~G~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 239 (323)
T cd05584 179 KAVDWWSLGALMYDMLTGAPPF-TAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNP 239 (323)
T ss_pred CcceecccHHHHHHHhcCCCCC-CCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCH
Confidence 5679999999999999987652 1223333333332 2468999999999998764
No 278
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=20.26 E-value=2.2e+02 Score=28.06 Aligned_cols=54 Identities=17% Similarity=0.155 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-------hhcCHHHHHHHHHHhccCC
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-------RSYSADLRNLILYLLSVHQ 170 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-------~~yS~dl~~~i~~Lls~~~ 170 (487)
.+-|+-+||.++..|.++..+-. ..+.......+. +.+|.+++++|..++...+
T Consensus 175 ~~~DiwslGvil~~l~~G~~pf~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP 235 (318)
T cd05570 175 PAVDWWALGVLLYEMLAGQSPFE-GDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNP 235 (318)
T ss_pred cchhhhhHHHHHHHHhhCCCCCC-CCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCH
Confidence 57899999999999999875521 122222222222 3579999999999998764
No 279
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=20.25 E-value=2.5e+02 Score=25.79 Aligned_cols=59 Identities=19% Similarity=0.153 Sum_probs=38.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH-------hhhcCHHHHHHHHHHhccCC--cCCH
Q psy1282 115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM-------ARSYSADLRNLILYLLSVHQ--KRTV 174 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~-------~~~yS~dl~~~i~~Lls~~~--~k~i 174 (487)
..+-|+-+||.++.+|.++..+-...++ .+-...+ ....+.++++++..++...+ +.+.
T Consensus 171 ~~~~D~~slG~~~~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~ 238 (250)
T cd05123 171 GKAVDWWSLGVLLYEMLTGKPPFYAEDR-KEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGS 238 (250)
T ss_pred CchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCc
Confidence 4789999999999999998754211111 1111111 12458899999999997654 4444
No 280
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=20.21 E-value=1.3e+02 Score=30.02 Aligned_cols=61 Identities=18% Similarity=0.171 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-----------hhcCHHHHHHHHHHhccC-CcCC---HHHH
Q psy1282 116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-----------RSYSADLRNLILYLLSVH-QKRT---VVDL 177 (487)
Q Consensus 116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-----------~~yS~dl~~~i~~Lls~~-~~k~---i~~l 177 (487)
.+-|+-+||.++..|.+|..+-. ..+....+..+. ..+|++++++|.-|+... .+.+ +.++
T Consensus 218 ~~~DiwSlG~il~el~~G~~Pf~-~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~~p~~R~~~~~~~~l 293 (364)
T cd05599 218 KECDWWSLGVIMYEMLVGYPPFC-SDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCCEAERRLGNNGVNEI 293 (364)
T ss_pred CeeeeecchhHHHHhhcCCCCCC-CCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHccCHhhcCCCCCHHHH
Confidence 45799999999999999876521 122222222221 146899999999888633 2333 6654
No 281
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=20.02 E-value=2.3e+02 Score=27.28 Aligned_cols=22 Identities=14% Similarity=0.164 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCch
Q psy1282 115 DLQDDLTALGKLILAMTCRSLM 136 (487)
Q Consensus 115 ~QqeDl~~lG~LiLaLA~~~~~ 136 (487)
..+-|+-+||.++..+.++.++
T Consensus 194 ~~~~DiwSlG~il~el~tg~~~ 215 (317)
T cd07867 194 TKAIDIWAIGCIFAELLTSEPI 215 (317)
T ss_pred CcHHHHHhHHHHHHHHHhCCCC
Confidence 4678999999999999998754
Done!