Your job contains 1 sequence.
>psy1282
MKYIILCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPP
HVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDL
TALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPM
IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDR
YMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAEL
KQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDS
LENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDG
RPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLT
PKSTLPL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1282
(487 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0035397 - symbol:CG11486 species:7227 "Drosophila ... 761 5.7e-86 2
UNIPROTKB|J9PBG4 - symbol:PAN3 "Uncharacterized protein" ... 688 1.7e-80 2
UNIPROTKB|F1RSU6 - symbol:PAN3 "Uncharacterized protein" ... 688 1.2e-79 2
UNIPROTKB|F1PKU0 - symbol:PAN3 "Uncharacterized protein" ... 688 2.0e-79 2
UNIPROTKB|Q58A45 - symbol:PAN3 "PAB-dependent poly(A)-spe... 688 2.0e-79 2
UNIPROTKB|F1MVV2 - symbol:PAN3 "Uncharacterized protein" ... 688 2.0e-79 2
RGD|1590880 - symbol:Pan3 "PAN3 polyA specific ribonuclea... 688 2.0e-79 2
MGI|MGI:1919837 - symbol:Pan3 "PAN3 polyA specific ribonu... 688 2.5e-79 2
ZFIN|ZDB-GENE-070928-13 - symbol:pan3 "PAN3 poly(A) speci... 692 3.2e-79 2
UNIPROTKB|F1P381 - symbol:PAN3 "Uncharacterized protein" ... 689 9.5e-78 2
UNIPROTKB|A0JNE1 - symbol:PAN3 "Uncharacterized protein" ... 558 4.2e-67 2
DICTYBASE|DDB_G0279129 - symbol:pan3 "polyA specific ribo... 535 3.3e-57 2
UNIPROTKB|Q2KFH6 - symbol:PAN3 "PAB-dependent poly(A)-spe... 425 1.3e-45 2
ASPGD|ASPL0000062682 - symbol:AN10119 species:162425 "Eme... 414 1.1e-42 2
ASPGD|ASPL0000061040 - symbol:AN10121 species:162425 "Eme... 414 1.1e-42 2
SGD|S000001508 - symbol:PAN3 "Essential subunit of the Pa... 333 9.1e-28 1
POMBASE|SPAC1B1.04c - symbol:SPAC1B1.04c "poly(A)-specifi... 229 4.6e-15 2
CGD|CAL0004671 - symbol:PAN3 species:5476 "Candida albica... 185 1.2e-14 2
POMBASE|SPBC336.14c - symbol:ppk26 "serine/threonine prot... 198 1.6e-12 1
>FB|FBgn0035397 [details] [associations]
symbol:CG11486 species:7227 "Drosophila melanogaster"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IKR] [GO:0004672 "protein kinase
activity" evidence=IKR] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000719 InterPro:IPR011009 Pfam:PF00069 GO:GO:0005524
EMBL:AE014296 SUPFAM:SSF56112 GO:GO:0004672 KO:K12572
GeneTree:ENSGT00390000001504 UniGene:Dm.831 GeneID:38369
KEGG:dme:Dmel_CG11486 FlyBase:FBgn0035397 GenomeRNAi:38369
NextBio:808243 EMBL:AY061183 RefSeq:NP_647767.1 DIP:DIP-17364N
IntAct:Q95RR8 MINT:MINT-337479 STRING:Q95RR8
EnsemblMetazoa:FBtr0072991 UCSC:CG11486-RG InParanoid:Q95RR8
OMA:HQENVGG Uniprot:Q95RR8
Length = 790
Score = 761 (272.9 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 144/210 (68%), Positives = 176/210 (83%)
Query: 107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
PL + N H QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL
Sbjct: 581 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 639
Query: 167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
+ + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +INERP
Sbjct: 640 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 699
Query: 227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct: 700 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 759
Query: 287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 760 RDEQSVLIVSYAELKNCLENAFSELMSSAA 789
Score = 584 (210.6 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 325 LYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTI 384
+YL + + +R+V DLMPMIGAR+YTQLDA+Q D E+EL+KEMENGRL+R+LVKL +I
Sbjct: 636 VYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSI 695
Query: 385 NERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI 444
NERP+ NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++
Sbjct: 696 NERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERV 755
Query: 445 CLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
LMSRDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct: 756 QLMSRDEQSVLIVSYAELKNCLENAFSELMSSAA 789
Score = 118 (46.6 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 41/122 (33%), Positives = 56/122 (45%)
Query: 9 QENFGGTTYFYQAPSSGTEVP-------GAAGPA-PGDDLSAPGVLSSPPG--YTMH--P 56
QEN GGT YFY ++ P PA G AP P YT H P
Sbjct: 269 QENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPAAMMYTGHVYP 328
Query: 57 GTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALT--LVSANPELFPELPLEVDNYH 114
G +V P T+ S+F+M + +RAE+ +N ++ ++ A LPLEV+NYH
Sbjct: 329 GPSSNVVTMQPK--TLLESAFFMPDEMRAEVLARNEISNLIMDAAEAAQHALPLEVENYH 386
Query: 115 DL 116
L
Sbjct: 387 AL 388
Score = 53 (23.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 30/114 (26%), Positives = 53/114 (46%)
Query: 311 LSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEME 370
+S P ++ PL L+++HQ+ + L ++ A L +VQ D++++ +
Sbjct: 568 ISDITQFDPNASNPLALVNMHQQDDLTALGRLVLALACRCLQSVQR--DNVQSSIDMVTR 625
Query: 371 NGR--LFRLLVKLGTINERPEL-NLDPTWSETGDRYMLKLFRDYLLHQV--QED 419
N L +V L T N R + +L P G R+ +L D L ++ QED
Sbjct: 626 NYSTDLRNFIVYLFTTNNRRSVTDLMPM---IGARFYTQL--DALQSKIDMQED 674
Score = 43 (20.2 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 41 SAPGVLSSPPGYTMHPGTP-PHVRHKPPNAATVDHSS-FYMSENIRAEIQHKNALTLVSA 98
+ PG S P G T H +P P + V + FY + N + N++ +
Sbjct: 240 AGPGEKSPPHGMTPHGASPIPSALPTSVHQENVGGTIYFYPTANAQNSQPVVNSMVVDGT 299
Query: 99 NPEL 102
+P L
Sbjct: 300 HPAL 303
>UNIPROTKB|J9PBG4 [details] [associations]
symbol:PAN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR000719
InterPro:IPR011009 PROSITE:PS50011 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0003676
GO:GO:0004672 OMA:YYAKDKT GeneTree:ENSGT00390000001504
EMBL:AAEX03014240 Ensembl:ENSCAFT00000049846 Uniprot:J9PBG4
Length = 906
Score = 688 (247.2 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 127/201 (63%), Positives = 166/201 (82%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 703 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 762
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 763 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 822
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 823 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 882
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 883 TYSDLKRCFENTFQELIAAAN 903
Score = 554 (200.1 bits), Expect = 4.9e-65, Sum P(2) = 4.9e-65
Identities = 103/157 (65%), Positives = 130/157 (82%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 747 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 806
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 807 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 866
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 867 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 903
Score = 139 (54.0 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 9 QENFGGTTYFYQ--APSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKP 66
+E GGTTYFY P+ T + + ++ P Y ++P T PHV +
Sbjct: 395 KETVGGTTYFYTDTTPAPLTGMRSFKNYHRTACRTEGQIIEVFPNYHIYPPTAPHVAYMQ 454
Query: 67 PNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH L
Sbjct: 455 PKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSL 501
Score = 86 (35.3 bits), Expect = 6.7e-75, Sum P(2) = 6.7e-75
Identities = 24/63 (38%), Positives = 27/63 (42%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
SQ N + + PS G+ P AAG APG LSA P T H P R P
Sbjct: 307 SQSNMSAFSQVFSHPSMGS--PAAAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP 364
Query: 68 NAA 70
N A
Sbjct: 365 NPA 367
Score = 47 (21.6 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 28 VPGA-AGPAPGD---DLSAPGVLSSPPG 51
VPG AGP PG DL PG ++ G
Sbjct: 103 VPGGGAGPPPGPKKPDLGGPGAGATAGG 130
Score = 46 (21.3 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 25 GTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPG-TPPHVRHKPPNAATVDHSSFYMSE 81
G P AA L+A + +PPG PG V+ K D + FY E
Sbjct: 6 GLPPPSAAASPSSSSLAAAVAVVAPPGVGGVPGGAAAGVKLKYCRYYAKDKTCFYGEE 63
Score = 37 (18.1 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 11 NFGGTTYFYQAPSSGTEVP 29
NFG T Y+A +S ++P
Sbjct: 518 NFGYITSCYKAVNSKDDLP 536
>UNIPROTKB|F1RSU6 [details] [associations]
symbol:PAN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010606 "positive regulation of cytoplasmic mRNA
processing body assembly" evidence=IEA] [GO:0006605 "protein
targeting" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR000719 InterPro:IPR011009 PROSITE:PS50011
PROSITE:PS50103 SMART:SM00356 GO:GO:0005524 GO:GO:0005813
SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0003676 GO:GO:0004672 KO:K12572
OMA:YYAKDKT GeneTree:ENSGT00390000001504 EMBL:FP016251
RefSeq:XP_003130958.1 UniGene:Ssc.2451 Ensembl:ENSSSCT00000010210
GeneID:100514180 KEGG:ssc:100514180 Uniprot:F1RSU6
Length = 887
Score = 688 (247.2 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 127/201 (63%), Positives = 166/201 (82%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 864 TYSDLKRCFENTFQELIAAAN 884
Score = 554 (200.1 bits), Expect = 2.6e-64, Sum P(2) = 2.6e-64
Identities = 103/157 (65%), Positives = 130/157 (82%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 728 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 787
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 788 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 847
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 848 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 884
Score = 131 (51.2 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 20 QAPSSGTEVPG--AAGPAPGDDLSAPGVLSSP--PGYTMHPGTPPHVRHKPPNAATVDHS 75
Q PSSG + G S P +SS P Y ++P T PHV + P A +
Sbjct: 385 QTPSSGQVIQKETVGGTTYFYTDSTPAPVSSVVFPNYHIYPPTAPHVAYMQPKA---NAP 441
Query: 76 SFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
SF+M++ +R E+ +++ +T+ + P +P EVD+YH L
Sbjct: 442 SFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSL 482
Score = 79 (32.9 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 23/64 (35%), Positives = 27/64 (42%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
SQ + + + PS GT P AA APG LSA P T H P R P
Sbjct: 307 SQSHMSAFSQVFSHPSLGT--PAAAALAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP 364
Query: 68 NAAT 71
N A+
Sbjct: 365 NPAS 368
Score = 57 (25.1 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 20/55 (36%), Positives = 21/55 (38%)
Query: 16 TYFYQAPSSGTEVPGAAGPAPGDDL---SAPGVLSSPPGYTMHPGTPPHVRHKPP 67
T FY AAG APG L S P L+ PG PG P PP
Sbjct: 57 TCFYGEECQFLHEDPAAGAAPGLGLHSNSVPLALAGAPGAGFPPGAVPGGGAGPP 111
Score = 48 (22.0 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 9 QENFGGTTYFYQ----APSSGTEVP 29
+E GGTTYFY AP S P
Sbjct: 395 KETVGGTTYFYTDSTPAPVSSVVFP 419
Score = 48 (22.0 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 15/31 (48%), Positives = 16/31 (51%)
Query: 21 APSSGTE---VPGA-AGPAPGD---DLSAPG 44
AP +G VPG AGP PG DL PG
Sbjct: 93 APGAGFPPGAVPGGGAGPPPGPKKPDLGGPG 123
Score = 48 (22.0 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 17/58 (29%), Positives = 23/58 (39%)
Query: 25 GTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPG-TPPHVRHKPPNAATVDHSSFYMSE 81
G P AA + L+A + +PPG PG V+ K D + FY E
Sbjct: 6 GLPPPSAAASSSSSSLAAAVAVVAPPGVGGVPGGAAAGVKLKYCRYYAKDKTCFYGEE 63
Score = 37 (18.1 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 11 NFGGTTYFYQAPSSGTEVP 29
NFG T Y+A +S ++P
Sbjct: 499 NFGYITSCYKAVNSKDDLP 517
>UNIPROTKB|F1PKU0 [details] [associations]
symbol:PAN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR000719
InterPro:IPR011009 PROSITE:PS50011 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0003676
GO:GO:0004672 KO:K12572 CTD:255967 GeneTree:ENSGT00390000001504
EMBL:AAEX03014240 RefSeq:XP_543150.3 Ensembl:ENSCAFT00000010833
GeneID:486024 KEGG:cfa:486024 Uniprot:F1PKU0
Length = 887
Score = 688 (247.2 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 127/201 (63%), Positives = 166/201 (82%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 864 TYSDLKRCFENTFQELIAAAN 884
Score = 554 (200.1 bits), Expect = 4.2e-64, Sum P(2) = 4.2e-64
Identities = 103/157 (65%), Positives = 130/157 (82%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 728 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 787
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 788 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 847
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 848 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 884
Score = 129 (50.5 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 20 QAPSSGT----EVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAATVDHS 75
Q PSSG E G D AP P Y ++P T PHV + P A +
Sbjct: 385 QTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYPPTAPHVAYMQPKA---NAP 441
Query: 76 SFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
SF+M++ +R E+ +++ +T+ + P +P EVD+YH L
Sbjct: 442 SFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSL 482
Score = 86 (35.3 bits), Expect = 6.7e-75, Sum P(2) = 6.7e-75
Identities = 24/63 (38%), Positives = 27/63 (42%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
SQ N + + PS G+ P AAG APG LSA P T H P R P
Sbjct: 307 SQSNMSAFSQVFSHPSMGS--PAAAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP 364
Query: 68 NAA 70
N A
Sbjct: 365 NPA 367
Score = 50 (22.7 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 9 QENFGGTTYFYQ----APSSGTEVP 29
+E GGTTYFY AP +G P
Sbjct: 395 KETVGGTTYFYTDTTPAPLTGMVFP 419
Score = 47 (21.6 bits), Expect = 8.6e-71, Sum P(2) = 8.6e-71
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 28 VPGA-AGPAPGD---DLSAPGVLSSPPG 51
VPG AGP PG DL PG ++ G
Sbjct: 103 VPGGGAGPPPGPKKPDLGGPGAGATAGG 130
Score = 46 (21.3 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 25 GTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPG-TPPHVRHKPPNAATVDHSSFYMSE 81
G P AA L+A + +PPG PG V+ K D + FY E
Sbjct: 6 GLPPPSAAASPSSSSLAAAVAVVAPPGVGGVPGGAAAGVKLKYCRYYAKDKTCFYGEE 63
Score = 37 (18.1 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 11 NFGGTTYFYQAPSSGTEVP 29
NFG T Y+A +S ++P
Sbjct: 499 NFGYITSCYKAVNSKDDLP 517
>UNIPROTKB|Q58A45 [details] [associations]
symbol:PAN3 "PAB-dependent poly(A)-specific ribonuclease
subunit 3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0006605 "protein targeting"
evidence=IEA] [GO:0010606 "positive regulation of cytoplasmic mRNA
processing body assembly" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0005813
"centrosome" evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000571 InterPro:IPR000719 InterPro:IPR011009
PROSITE:PS50011 PROSITE:PS50103 SMART:SM00356 GO:GO:0005829
GO:GO:0005524 GO:GO:0005813 GO:GO:0000184 GO:GO:0046872
SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0003676 GO:GO:0004672
GO:GO:0000289 EMBL:AL356915 eggNOG:NOG260889 KO:K12572
EMBL:AK091307 EMBL:AK296435 EMBL:EF088216 EMBL:AL138712
EMBL:BC024318 EMBL:BC128179 EMBL:BC128180 EMBL:AB107584
EMBL:AB109552 EMBL:BX647740 IPI:IPI00513919 IPI:IPI00829672
IPI:IPI00954802 IPI:IPI01022195 RefSeq:NP_787050.6
UniGene:Hs.645015 ProteinModelPortal:Q58A45 IntAct:Q58A45
STRING:Q58A45 PhosphoSite:Q58A45 DMDM:134034989 PaxDb:Q58A45
PRIDE:Q58A45 Ensembl:ENST00000282391 Ensembl:ENST00000380958
Ensembl:ENST00000399613 GeneID:255967 KEGG:hsa:255967
UCSC:uc001urx.3 UCSC:uc001ury.3 UCSC:uc001urz.3 UCSC:uc010tdo.1
CTD:255967 GeneCards:GC13P028713 H-InvDB:HIX0011200 HGNC:HGNC:29991
HPA:HPA028817 neXtProt:NX_Q58A45 PharmGKB:PA144596398
HOVERGEN:HBG058849 InParanoid:Q58A45 OMA:YYAKDKT OrthoDB:EOG4K9BBK
ChiTaRS:PAN3 GenomeRNAi:255967 NextBio:92689 ArrayExpress:Q58A45
Bgee:Q58A45 CleanEx:HS_PAN3 Genevestigator:Q58A45 Uniprot:Q58A45
Length = 887
Score = 688 (247.2 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 127/201 (63%), Positives = 166/201 (82%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 864 TYSDLKRCFENTFQELIAAAN 884
Score = 554 (200.1 bits), Expect = 4.2e-64, Sum P(2) = 4.2e-64
Identities = 103/157 (65%), Positives = 130/157 (82%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 728 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 787
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 788 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 847
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 848 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 884
Score = 129 (50.5 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 20 QAPSSGT----EVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAATVDHS 75
Q PSSG E G D AP P Y ++P T PHV + P A +
Sbjct: 385 QTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYPPTAPHVAYMQPKA---NAP 441
Query: 76 SFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
SF+M++ +R E+ +++ +T+ + P +P EVD+YH L
Sbjct: 442 SFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSL 482
Score = 83 (34.3 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 23/64 (35%), Positives = 27/64 (42%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
SQ N + + PS G+ P AG APG LSA P T H P R P
Sbjct: 307 SQSNMSAFSQVFSHPSMGS--PATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP 364
Query: 68 NAAT 71
N A+
Sbjct: 365 NPAS 368
Score = 50 (22.7 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 9 QENFGGTTYFYQ----APSSGTEVP 29
+E GGTTYFY AP +G P
Sbjct: 395 KETVGGTTYFYTDTTPAPLTGMVFP 419
Score = 45 (20.9 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 25 GTEVPGAAGPAPGD---DLSAPGVLSSPPG 51
G G AGP PG DL PG ++ G
Sbjct: 101 GAVAGGGAGPPPGPKKPDLGDPGTGAAAGG 130
Score = 45 (20.9 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 25 GTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPG-TPPHVRHKPPNAATVDHSSFYMSE 81
G P AA L+A + +PPG PG V+ K D + FY E
Sbjct: 6 GLPPPSAAASPSSSSLAAAVAVVAPPGVGGVPGGAAVGVKLKYCRYYAKDKTCFYGEE 63
Score = 37 (18.1 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 11 NFGGTTYFYQAPSSGTEVP 29
NFG T Y+A +S ++P
Sbjct: 499 NFGYITSCYKAVNSKDDLP 517
>UNIPROTKB|F1MVV2 [details] [associations]
symbol:PAN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010606 "positive regulation of cytoplasmic mRNA
processing body assembly" evidence=IEA] [GO:0006605 "protein
targeting" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR011009 PROSITE:PS50011 GO:GO:0005524
GO:GO:0005813 SUPFAM:SSF56112 GO:GO:0004672 OMA:YYAKDKT
GeneTree:ENSGT00390000001504 EMBL:DAAA02033117 EMBL:DAAA02033118
EMBL:DAAA02033119 IPI:IPI00705566 Ensembl:ENSBTAT00000013076
Uniprot:F1MVV2
Length = 657
Score = 688 (247.2 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 127/201 (63%), Positives = 166/201 (82%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 454 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 513
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 514 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 573
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 574 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 633
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 634 TYSDLKRCFENTFQELIAAAN 654
Score = 554 (200.1 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 103/157 (65%), Positives = 130/157 (82%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 498 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 557
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 558 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 617
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 618 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 654
Score = 129 (50.5 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 36/109 (33%), Positives = 53/109 (48%)
Query: 14 GTTYFYQAPSSGT----EVPGAAGPAPGDDLSAPGVLSSP--PGYTMHPGTPPHVRHKPP 67
G Q PSSG E G D AP LS P Y ++P T PHV + P
Sbjct: 149 GNNSVSQTPSSGQVIQKETVGGTTYFYTDTTPAP--LSGMVFPNYHIYPPTAPHVAYMQP 206
Query: 68 NAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH L
Sbjct: 207 KA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSL 252
Score = 83 (34.3 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 24/63 (38%), Positives = 27/63 (42%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
SQ + + + PS GT P AAG APG LSA P T H P R P
Sbjct: 77 SQSHASAFSQVFSHPSMGT--PAAAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP 134
Query: 68 NAA 70
N A
Sbjct: 135 NPA 137
Score = 53 (23.7 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 9 QENFGGTTYFYQ----APSSGTEVP 29
+E GGTTYFY AP SG P
Sbjct: 165 KETVGGTTYFYTDTTPAPLSGMVFP 189
Score = 37 (18.1 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 11 NFGGTTYFYQAPSSGTEVP 29
NFG T Y+A +S ++P
Sbjct: 269 NFGYITSCYKAVNSKDDLP 287
>RGD|1590880 [details] [associations]
symbol:Pan3 "PAN3 polyA specific ribonuclease subunit homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0006605 "protein targeting" evidence=ISO]
[GO:0010606 "positive regulation of cytoplasmic mRNA processing
body assembly" evidence=ISO] InterPro:IPR000719 InterPro:IPR011009
PROSITE:PS50011 RGD:1590880 GO:GO:0005524 GO:GO:0005813
SUPFAM:SSF56112 GO:GO:0004672 OrthoDB:EOG4K9BBK
GeneTree:ENSGT00390000001504 IPI:IPI00766046
Ensembl:ENSRNOT00000044134 UCSC:RGD:1590880 ArrayExpress:D4ADM2
Uniprot:D4ADM2
Length = 691
Score = 688 (247.2 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 128/207 (61%), Positives = 168/207 (81%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 484 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 543
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 544 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 603
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L SRDE+SVLVV
Sbjct: 604 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLTSRDEKSVLVV 663
Query: 296 SYAELKQCLDQSFHELSSSASLTPKST 322
+Y++LK+C + +F EL ++A+ +S+
Sbjct: 664 TYSDLKRCFENTFQELIAAANGNDRSS 690
Score = 554 (200.1 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 104/163 (63%), Positives = 132/163 (80%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 528 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 587
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 588 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 647
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKST 484
EKI L SRDE+SVLVV+Y++LK+C + +F EL ++A+ +S+
Sbjct: 648 EKISLTSRDEKSVLVVTYSDLKRCFENTFQELIAAANGNDRSS 690
Score = 129 (50.5 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 20 QAPSSGT----EVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAATVDHS 75
Q PSSG E G D AP P Y ++P T PHV + P A +
Sbjct: 185 QTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYPPTAPHVAYMQPKA---NAP 241
Query: 76 SFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
SF+M++ +R E+ +++ +T+ + P +P EVD+YH L
Sbjct: 242 SFFMADELRQELINRHLITMAQIDQADLPAVPTEVDSYHSL 282
Score = 83 (34.3 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 23/64 (35%), Positives = 27/64 (42%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
SQ N + + PS G+ P AG APG LSA P T H P R P
Sbjct: 107 SQSNMSAFSQVFSHPSMGS--PATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP 164
Query: 68 NAAT 71
N A+
Sbjct: 165 NPAS 168
Score = 50 (22.7 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 9 QENFGGTTYFYQ----APSSGTEVP 29
+E GGTTYFY AP +G P
Sbjct: 195 KETVGGTTYFYTDTTPAPLTGMVFP 219
Score = 37 (18.1 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 11 NFGGTTYFYQAPSSGTEVP 29
NFG T Y+A +S ++P
Sbjct: 299 NFGYITSCYKAVNSKDDLP 317
>MGI|MGI:1919837 [details] [associations]
symbol:Pan3 "PAN3 polyA specific ribonuclease subunit
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000290 "deadenylation-dependent decapping
of nuclear-transcribed mRNA" evidence=IMP] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006605 "protein targeting" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010606 "positive regulation of
cytoplasmic mRNA processing body assembly" evidence=IMP;IDA]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR000719
InterPro:IPR011009 PROSITE:PS50011 PROSITE:PS50103 SMART:SM00356
MGI:MGI:1919837 GO:GO:0005524 GO:GO:0005813 GO:GO:0006605
GO:GO:0000184 GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270
GO:GO:0003676 GO:GO:0004672 GO:GO:0000932 GO:GO:0010606
GO:GO:0000290 eggNOG:NOG260889 KO:K12572 HOGENOM:HOG000007619
CTD:255967 HOVERGEN:HBG058849 OrthoDB:EOG4K9BBK ChiTaRS:PAN3
EMBL:AK012409 EMBL:AK028869 EMBL:AK153632 EMBL:AC131730
EMBL:AC134441 EMBL:BC082547 IPI:IPI00830682 IPI:IPI00975197
RefSeq:NP_082567.3 UniGene:Mm.320469 UniGene:Mm.489723
ProteinModelPortal:Q640Q5 STRING:Q640Q5 PhosphoSite:Q640Q5
PRIDE:Q640Q5 Ensembl:ENSMUST00000031651 GeneID:72587 KEGG:mmu:72587
UCSC:uc009aod.2 UCSC:uc009aoe.2 UCSC:uc009aog.2
GeneTree:ENSGT00390000001504 InParanoid:Q640Q5 NextBio:336551
Bgee:Q640Q5 Genevestigator:Q640Q5 Uniprot:Q640Q5
Length = 837
Score = 688 (247.2 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 127/201 (63%), Positives = 166/201 (82%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 630 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 689
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 690 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 749
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 750 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 809
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 810 TYSDLKRCFENTFQELIAAAN 830
Score = 554 (200.1 bits), Expect = 2.2e-64, Sum P(2) = 2.2e-64
Identities = 103/157 (65%), Positives = 130/157 (82%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 674 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 733
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 734 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVP 793
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 794 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 830
Score = 128 (50.1 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 20 QAPSSGT----EVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAATVDHS 75
Q PSSG E G D AP P Y ++P T PHV + P A +
Sbjct: 331 QPPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYPPTAPHVAYMQPKA---NAP 387
Query: 76 SFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
SF+M++ +R E+ +++ +T+ + P +P EVD+YH L
Sbjct: 388 SFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSL 428
Score = 83 (34.3 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 23/64 (35%), Positives = 27/64 (42%)
Query: 8 SQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPP 67
SQ N + + PS G+ P AG APG LSA P T H P R P
Sbjct: 253 SQSNMSAFSQVFSHPSMGS--PATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP 310
Query: 68 NAAT 71
N A+
Sbjct: 311 NPAS 314
Score = 50 (22.7 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 9 QENFGGTTYFYQ----APSSGTEVP 29
+E GGTTYFY AP +G P
Sbjct: 341 KETVGGTTYFYTDTTPAPLTGMVFP 365
Score = 37 (18.1 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 11 NFGGTTYFYQAPSSGTEVP 29
NFG T Y+A +S ++P
Sbjct: 445 NFGYITSCYKAVNSKDDLP 463
>ZFIN|ZDB-GENE-070928-13 [details] [associations]
symbol:pan3 "PAN3 poly(A) specific ribonuclease
subunit homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000571 InterPro:IPR011009 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-070928-13 SUPFAM:SSF56112 GO:GO:0008270
GO:GO:0003676 GO:GO:0016772 KO:K12572 CTD:255967
GeneTree:ENSGT00390000001504 EMBL:BX571696 IPI:IPI00997002
RefSeq:NP_001099162.2 UniGene:Dr.64351 Ensembl:ENSDART00000048273
GeneID:100126012 KEGG:dre:100126012 NextBio:20788905 Uniprot:E7EXP6
Length = 799
Score = 692 (248.7 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 129/201 (64%), Positives = 167/201 (83%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L++ +YS+DL+NLILYLLS + R+V
Sbjct: 596 QADLISLGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLSEQSRLRSVN 655
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 656 DIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 715
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 716 ETGDRYLLKLFRDHLFHQVTETGTPWVDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVV 775
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 776 TYSDLKRCFESTFQELLATAN 796
Score = 559 (201.8 bits), Expect = 5.0e-65, Sum P(2) = 5.0e-65
Identities = 109/174 (62%), Positives = 135/174 (77%)
Query: 306 QSFHELSSSASLTPKSTLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENE 364
Q EL S + L LYLLS + R+V D+MPMIGAR+YTQLDA Q+ D +E +
Sbjct: 623 QKAMELVSINYSSDLKNLILYLLSEQSRLRSVNDIMPMIGARFYTQLDASQMRNDVIEED 682
Query: 365 LSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWL 424
L+KE++NGRLFRLL KLGTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+
Sbjct: 683 LAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTETGTPWV 742
Query: 425 DMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
D+SHIV CLNKLDAG EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 743 DLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVVTYSDLKRCFESTFQELLATAN 796
Score = 123 (48.4 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 38 DDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVS 97
D+ AP P Y M+P T PHV + P A + SF+M++ +R E+ +++ +T+
Sbjct: 320 DNTPAPLAGMVFPTYHMYPQTAPHVAYMQPKA---NAPSFFMADELRQELINRHLITMAQ 376
Query: 98 ANPELFPELPLEVDNYHDL 116
+ P +P EVD+YH L
Sbjct: 377 IDQSENPGVPSEVDSYHSL 395
Score = 53 (23.7 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 16/47 (34%), Positives = 17/47 (36%)
Query: 22 PSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPN 68
P G A+ APG LSA P T H P R PN
Sbjct: 236 PHPGLSSSTASALAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPN 282
Score = 51 (23.0 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 6 LCSQENFGGTTYFYQ----APSSGTEVP 29
+ +E GGTTYFY AP +G P
Sbjct: 305 IIQKETVGGTTYFYTDNTPAPLAGMVFP 332
>UNIPROTKB|F1P381 [details] [associations]
symbol:PAN3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0006605
"protein targeting" evidence=IEA] [GO:0010606 "positive regulation
of cytoplasmic mRNA processing body assembly" evidence=IEA]
InterPro:IPR000719 InterPro:IPR011009 PROSITE:PS50011 GO:GO:0005524
GO:GO:0005813 SUPFAM:SSF56112 GO:GO:0004672 OMA:YYAKDKT
GeneTree:ENSGT00390000001504 EMBL:AADN02005199 IPI:IPI00592773
Ensembl:ENSGALT00000027609 Uniprot:F1P381
Length = 738
Score = 689 (247.6 bits), Expect = 9.5e-78, Sum P(2) = 9.5e-78
Identities = 127/201 (63%), Positives = 166/201 (82%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 535 QTDLISLGKVVLALACNSLSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVN 594
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 595 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 654
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG EKI L+SRDE+SVLVV
Sbjct: 655 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 714
Query: 296 SYAELKQCLDQSFHELSSSAS 316
+Y++LK+C + +F EL ++A+
Sbjct: 715 TYSDLKRCFENTFQELIAAAN 735
Score = 554 (200.1 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 103/157 (65%), Positives = 130/157 (82%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 579 LILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 638
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQ 441
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG
Sbjct: 639 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVP 698
Query: 442 EKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI L+SRDE+SVLVV+Y++LK+C + +F EL ++A+
Sbjct: 699 EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN 735
Score = 112 (44.5 bits), Expect = 9.5e-78, Sum P(2) = 9.5e-78
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 20 QAPSSGT----EVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAATVDHS 75
Q PS+G E G D AP P Y ++ PHV + P A +
Sbjct: 237 QPPSTGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYHPAAPHVAYMQPKA---NAP 293
Query: 76 SFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
SF+M++ +R E+ +++ +T+ + P +P EVD+YH L
Sbjct: 294 SFFMADELRQELINRHLITMAQVDQADIPAVPAEVDSYHSL 334
Score = 74 (31.1 bits), Expect = 9.7e-74, Sum P(2) = 9.7e-74
Identities = 21/52 (40%), Positives = 23/52 (44%)
Query: 19 YQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAA 70
+ PS G+ P AAG APG LSA P T H P R PN A
Sbjct: 170 FSHPSMGS--PAAAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPA 219
Score = 50 (22.7 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 9 QENFGGTTYFYQ----APSSGTEVP 29
+E GGTTYFY AP +G P
Sbjct: 247 KETVGGTTYFYTDTTPAPLTGMVFP 271
Score = 37 (18.1 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 11 NFGGTTYFYQAPSSGTEVP 29
NFG T Y+A +S ++P
Sbjct: 351 NFGYITSCYKAVNSKDDLP 369
>UNIPROTKB|A0JNE1 [details] [associations]
symbol:PAN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR011009
SUPFAM:SSF56112 GO:GO:0016772 eggNOG:NOG260889 HOGENOM:HOG000007619
HOVERGEN:HBG058849 GeneTree:ENSGT00390000001504 EMBL:DAAA02033117
EMBL:DAAA02033118 EMBL:DAAA02033119 EMBL:BC126640 IPI:IPI00705566
UniGene:Bt.107708 STRING:A0JNE1 Ensembl:ENSBTAT00000035758
InParanoid:A0JNE1 NextBio:20872941 Uniprot:A0JNE1
Length = 469
Score = 558 (201.5 bits), Expect = 4.2e-67, Sum P(2) = 4.2e-67
Identities = 102/159 (64%), Positives = 131/159 (82%)
Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
Q DL +LGK++LA+ C SL +QRENLQ +++L+ +YS+DL+NLILYLL+ + R+V
Sbjct: 308 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 367
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KLGTINERPE DPTWS
Sbjct: 368 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 427
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKL 274
ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNK+
Sbjct: 428 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKV 466
Score = 424 (154.3 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
Identities = 78/115 (67%), Positives = 95/115 (82%)
Query: 323 LPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKL 381
L LYLL+ + R+V D+MPMIGAR+YTQLDA Q+ D +E +L+KE++NGRLFRLL KL
Sbjct: 352 LILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL 411
Query: 382 GTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKL 436
GTINERPE DPTWSETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNK+
Sbjct: 412 GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKV 466
Score = 142 (55.0 bits), Expect = 4.2e-67, Sum P(2) = 4.2e-67
Identities = 37/113 (32%), Positives = 58/113 (51%)
Query: 9 QENFGGTTYFYQ----APSSGTEVPGAAGPAPGDDLSAPG-VLSSPPGYTMHPGTPPHVR 63
+E GGTTYFY AP SG + A G ++ P Y ++P T PHV
Sbjct: 73 KETVGGTTYFYTDTTPAPLSGMR---SFKNYHRTACRAEGQIIEVFPNYHIYPPTAPHVA 129
Query: 64 HKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
+ P A + SF+M++ +R E+ +++ +T+ + P +P EVD+YH L
Sbjct: 130 YMQPKA---NAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSL 179
Score = 67 (28.6 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 18/42 (42%), Positives = 18/42 (42%)
Query: 29 PGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAA 70
P AAG APG LSA P T H P R PN A
Sbjct: 4 PAAAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPA 45
>DICTYBASE|DDB_G0279129 [details] [associations]
symbol:pan3 "polyA specific ribonuclease subunit"
species:44689 "Dictyostelium discoideum" [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0031251 "PAN
complex" evidence=ISS] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] [GO:0006301 "postreplication repair" evidence=ISS]
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000571 InterPro:IPR000719
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS50011 PROSITE:PS50103
dictyBase:DDB_G0279129 GO:GO:0005524 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0008270 GO:GO:0003676 GO:GO:0004672 EMBL:AAFI02000095
GO:GO:0006301 GO:GO:0004535 GO:GO:0031124 EMBL:AAFI02000094
GO:GO:0031251 Uniprot:P0CD65
Length = 746
Score = 535 (193.4 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 107/201 (53%), Positives = 138/201 (68%)
Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS--VHQKRTVV 175
+DL G+LIL + CRS + NL SI+ ++ YS +L NLI+YLL+ V +
Sbjct: 544 EDLLLFGRLILTLACRSAQSTTTTNLSKSIEYVSNQYSKELYNLIVYLLTKPVINLPNID 603
Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
+++ MI R + + + + D LE ELSKE ENGRLFRL+ KLG INERP ++DP WS
Sbjct: 604 EVVLMISGRLLQENNYLHTYTDDLETELSKEYENGRLFRLVTKLGFINERPLYDMDPRWS 663
Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
ETGDRY++KLFRDY+ HQV +DG P LD H+V LNKLD G EKI LMSRDEQS+LVV
Sbjct: 664 ETGDRYLIKLFRDYIFHQVYDDGTPVLDFYHVVETLNKLDCGVDEKILLMSRDEQSLLVV 723
Query: 296 SYAELKQCLDQSFHELSSSAS 316
SY +LK+C+D +F EL S S
Sbjct: 724 SYKDLKKCIDSAFSELVSQKS 744
Score = 441 (160.3 bits), Expect = 4.9e-46, Sum P(2) = 4.9e-46
Identities = 89/158 (56%), Positives = 112/158 (70%)
Query: 323 LPLYLLS--VHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVK 380
L +YLL+ V + +++ MI R + + + + D LE ELSKE ENGRLFRL+ K
Sbjct: 587 LIVYLLTKPVINLPNIDEVVLMISGRLLQENNYLHTYTDDLETELSKEYENGRLFRLVTK 646
Query: 381 LGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGT 440
LG INERP ++DP WSETGDRY++KLFRDY+ HQV +DG P LD H+V LNKLD G
Sbjct: 647 LGFINERPLYDMDPRWSETGDRYLIKLFRDYIFHQVYDDGTPVLDFYHVVETLNKLDCGV 706
Query: 441 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
EKI LMSRDEQS+LVVSY +LK+C+D +F EL S S
Sbjct: 707 DEKILLMSRDEQSLLVVSYKDLKKCIDSAFSELVSQKS 744
Score = 71 (30.1 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 17/67 (25%), Positives = 33/67 (49%)
Query: 52 YTMHPGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPE--LFPELPLE 109
YT +P V P + SF+MSE+++ +I ++ +L ++ +P +P
Sbjct: 306 YTPYPSYSQSVIRNKPGRRNI--GSFFMSESLKQDILNQKSLLYLTLDPNDPRIKNIPPM 363
Query: 110 VDNYHDL 116
++ YH L
Sbjct: 364 LNKYHSL 370
>UNIPROTKB|Q2KFH6 [details] [associations]
symbol:PAN3 "PAB-dependent poly(A)-specific ribonuclease
subunit PAN3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000571
InterPro:IPR000719 InterPro:IPR011009 PROSITE:PS50011
PROSITE:PS50103 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0006397 GO:GO:0003676
GO:GO:0004672 EMBL:CM000230 EMBL:CM001237 eggNOG:NOG260889
OrthoDB:EOG45F0Z0 RefSeq:XP_003720769.1 ProteinModelPortal:Q2KFH6
STRING:Q2KFH6 EnsemblFungi:MGG_02939T0 GeneID:2682492
KEGG:mgr:MGG_02939 Uniprot:Q2KFH6
Length = 680
Score = 425 (154.7 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 96/214 (44%), Positives = 137/214 (64%)
Query: 108 LEVDNYH------DLQD-DLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRN 160
L+V NY +LQ+ D A GKLI+++ + NL +I+ M R++S+ L++
Sbjct: 440 LDVINYEKSKPMTELQEEDFVAFGKLIVSLATNT--PPTGLNLGKAIEQMGRNHSSTLKD 497
Query: 161 LILYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLV 217
++L+LL+ Q ++TV +L+ I T DA Q D L +EL +E+ENGR+ RLL+
Sbjct: 498 MVLWLLNPPQASGQKTVKNLVAGINEHVMTAFDAQQRQSDMLYSELYREVENGRVLRLLM 557
Query: 218 KLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAG 277
KL TINER E + D WSE GDRYMLKLFRDY+ HQV GRP LD H++ CL+KLD G
Sbjct: 558 KLATINERTEYDKDAGWSENGDRYMLKLFRDYVFHQVDAQGRPVLDPGHMLRCLSKLDVG 617
Query: 278 TQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 311
T+E+I L SRD ++ +V+Y +LK + +F EL
Sbjct: 618 TEERIKLTSRDCETDFLVTYKDLKGAVQSAFGEL 651
Score = 373 (136.4 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 81/173 (46%), Positives = 112/173 (64%)
Query: 304 LDQSFHELSSSASLTPKSTLPLYLLSVHQ---KRTVVDLMPMIGARYYTQLDAVQLHGDS 360
L ++ ++ + S T K + L+LL+ Q ++TV +L+ I T DA Q D
Sbjct: 480 LGKAIEQMGRNHSSTLKDMV-LWLLNPPQASGQKTVKNLVAGINEHVMTAFDAQQRQSDM 538
Query: 361 LENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDG 420
L +EL +E+ENGR+ RLL+KL TINER E + D WSE GDRYMLKLFRDY+ HQV G
Sbjct: 539 LYSELYREVENGRVLRLLMKLATINERTEYDKDAGWSENGDRYMLKLFRDYVFHQVDAQG 598
Query: 421 RPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
RP LD H++ CL+KLD GT+E+I L SRD ++ +V+Y +LK + +F EL
Sbjct: 599 RPVLDPGHMLRCLSKLDVGTEERIKLTSRDCETDFLVTYKDLKGAVQSAFGEL 651
Score = 80 (33.2 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 49 PPGYTMHPGTPPHVRHKPP-NAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELP 107
PP + ++ P+ P +T D F+M EN+R E+Q+K+ L + ++P
Sbjct: 211 PPSFHLYAPIGPYREDLQPWQRSTYD---FFMPENLRLELQNKSHAALQTMTGTAALQMP 267
Query: 108 LEVDNYHDL 116
+V NYH L
Sbjct: 268 -QVGNYHTL 275
>ASPGD|ASPL0000062682 [details] [associations]
symbol:AN10119 species:162425 "Emericella nidulans"
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031251 "PAN
complex" evidence=IEA] [GO:0004535 "poly(A)-specific ribonuclease
activity" evidence=IEA] [GO:0031124 "mRNA 3'-end processing"
evidence=IEA] [GO:0006301 "postreplication repair" evidence=IEA]
InterPro:IPR000571 InterPro:IPR000719 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS50011 PROSITE:PS50103 GO:GO:0005524
GO:GO:0005737 EMBL:BN001308 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0008270 GO:GO:0006397 GO:GO:0003676 GO:GO:0004672
EMBL:AACD01000012 eggNOG:NOG260889 KO:K12572 RefSeq:XP_658373.1
GeneID:2876545 KEGG:ani:AN0769.2 HOGENOM:HOG000007619
OrthoDB:EOG45F0Z0 Uniprot:Q5BFB1
Length = 661
Score = 414 (150.8 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 92/202 (45%), Positives = 126/202 (62%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LIL + + N +++ R+YS L+N +++LL QK
Sbjct: 455 DLQRQDLVNFGQLILTLGANQPNVIH--NPSKAMEHFTRAYSPQLKNTVMWLLGGMQKDQ 512
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLH-GDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
R + L+ I ++ + D+ LH D L ++L +E+ENGRL RLL KL INERPE
Sbjct: 513 ERNIDILINGISSQLMSTFDSA-LHLDDQLTSDLGRELENGRLVRLLTKLNFINERPEHE 571
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
D WSE G+R+ LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT E+I L+SRDE
Sbjct: 572 HDRQWSENGERFYLKIFRDYVFHQVDASGDPVVDLGHVLTCLNKLDAGTDERITLVSRDE 631
Query: 290 QSVLVVSYAELKQCLDQSFHEL 311
Q+ VVSY ELK+ L+ SF L
Sbjct: 632 QTCFVVSYKELKKGLESSFQAL 653
Score = 364 (133.2 bits), Expect = 5.3e-37, Sum P(2) = 5.3e-37
Identities = 79/158 (50%), Positives = 106/158 (67%)
Query: 320 KSTLPLYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLH-GDSLENELSKEMENGRLF 375
K+T+ ++LL QK R + L+ I ++ + D+ LH D L ++L +E+ENGRL
Sbjct: 498 KNTV-MWLLGGMQKDQERNIDILINGISSQLMSTFDSA-LHLDDQLTSDLGRELENGRLV 555
Query: 376 RLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNK 435
RLL KL INERPE D WSE G+R+ LK+FRDY+ HQV G P +D+ H++ CLNK
Sbjct: 556 RLLTKLNFINERPEHEHDRQWSENGERFYLKIFRDYVFHQVDASGDPVVDLGHVLTCLNK 615
Query: 436 LDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
LDAGT E+I L+SRDEQ+ VVSY ELK+ L+ SF L
Sbjct: 616 LDAGTDERITLVSRDEQTCFVVSYKELKKGLESSFQAL 653
Score = 63 (27.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 30/111 (27%), Positives = 45/111 (40%)
Query: 18 FYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPG--YTMHPGTPPHVRHK---P--P--- 67
F P+ PGA GP + S ++ G Y G V++ P P
Sbjct: 174 FVSTPNP-LAAPGAVGPVQANPFSHDAAAATLGGAYYANQAGFQQPVQYHLYAPIGPHNQ 232
Query: 68 NAATVDHS--SFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
NA + ++ + R E+Q K A TL + P +LP +VD +H L
Sbjct: 233 NALAYQRNVHDLFLPNDFREELQKKAAATLQTL-PNT--QLPAQVDYFHSL 280
>ASPGD|ASPL0000061040 [details] [associations]
symbol:AN10121 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000571 InterPro:IPR000719 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS50011 PROSITE:PS50103 GO:GO:0005524
GO:GO:0005737 EMBL:BN001308 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0008270 GO:GO:0006397 GO:GO:0003676 GO:GO:0004672
EMBL:AACD01000012 eggNOG:NOG260889 KO:K12572 RefSeq:XP_658373.1
GeneID:2876545 KEGG:ani:AN0769.2 HOGENOM:HOG000007619
OrthoDB:EOG45F0Z0 Uniprot:Q5BFB1
Length = 661
Score = 414 (150.8 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 92/202 (45%), Positives = 126/202 (62%)
Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
DLQ DL G+LIL + + N +++ R+YS L+N +++LL QK
Sbjct: 455 DLQRQDLVNFGQLILTLGANQPNVIH--NPSKAMEHFTRAYSPQLKNTVMWLLGGMQKDQ 512
Query: 172 -RTVVDLMPMIGARYYTQLDAVQLH-GDSLENELSKEMENGRLFRLLVKLGTINERPELN 229
R + L+ I ++ + D+ LH D L ++L +E+ENGRL RLL KL INERPE
Sbjct: 513 ERNIDILINGISSQLMSTFDSA-LHLDDQLTSDLGRELENGRLVRLLTKLNFINERPEHE 571
Query: 230 LDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDE 289
D WSE G+R+ LK+FRDY+ HQV G P +D+ H++ CLNKLDAGT E+I L+SRDE
Sbjct: 572 HDRQWSENGERFYLKIFRDYVFHQVDASGDPVVDLGHVLTCLNKLDAGTDERITLVSRDE 631
Query: 290 QSVLVVSYAELKQCLDQSFHEL 311
Q+ VVSY ELK+ L+ SF L
Sbjct: 632 QTCFVVSYKELKKGLESSFQAL 653
Score = 364 (133.2 bits), Expect = 5.3e-37, Sum P(2) = 5.3e-37
Identities = 79/158 (50%), Positives = 106/158 (67%)
Query: 320 KSTLPLYLLSVHQK---RTVVDLMPMIGARYYTQLDAVQLH-GDSLENELSKEMENGRLF 375
K+T+ ++LL QK R + L+ I ++ + D+ LH D L ++L +E+ENGRL
Sbjct: 498 KNTV-MWLLGGMQKDQERNIDILINGISSQLMSTFDSA-LHLDDQLTSDLGRELENGRLV 555
Query: 376 RLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNK 435
RLL KL INERPE D WSE G+R+ LK+FRDY+ HQV G P +D+ H++ CLNK
Sbjct: 556 RLLTKLNFINERPEHEHDRQWSENGERFYLKIFRDYVFHQVDASGDPVVDLGHVLTCLNK 615
Query: 436 LDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHEL 473
LDAGT E+I L+SRDEQ+ VVSY ELK+ L+ SF L
Sbjct: 616 LDAGTDERITLVSRDEQTCFVVSYKELKKGLESSFQAL 653
Score = 63 (27.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 30/111 (27%), Positives = 45/111 (40%)
Query: 18 FYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPG--YTMHPGTPPHVRHK---P--P--- 67
F P+ PGA GP + S ++ G Y G V++ P P
Sbjct: 174 FVSTPNP-LAAPGAVGPVQANPFSHDAAAATLGGAYYANQAGFQQPVQYHLYAPIGPHNQ 232
Query: 68 NAATVDHS--SFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
NA + ++ + R E+Q K A TL + P +LP +VD +H L
Sbjct: 233 NALAYQRNVHDLFLPNDFREELQKKAAATLQTL-PNT--QLPAQVDYFHSL 280
>SGD|S000001508 [details] [associations]
symbol:PAN3 "Essential subunit of the Pan2p-Pan3p
poly(A)-ribonuclease complex" species:4932 "Saccharomyces
cerevisiae" [GO:0004535 "poly(A)-specific ribonuclease activity"
evidence=IMP;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0031251 "PAN complex" evidence=IDA] [GO:0031124 "mRNA 3'-end
processing" evidence=IMP;IPI] [GO:0006281 "DNA repair"
evidence=IDA] [GO:0006301 "postreplication repair"
evidence=IGI;IPI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR000719
InterPro:IPR011009 PROSITE:PS50011 PROSITE:PS50103 SGD:S000001508
GO:GO:0005524 GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270
GO:GO:0003676 EMBL:BK006944 GO:GO:0004672 GO:GO:0006301
GO:GO:0031124 GO:GO:0031251 eggNOG:NOG260889 KO:K12572
HOGENOM:HOG000007619 OrthoDB:EOG45F0Z0 GeneTree:ENSGT00390000001504
EMBL:Z28025 PIR:S37842 RefSeq:NP_012900.1 ProteinModelPortal:P36102
DIP:DIP-3987N IntAct:P36102 MINT:MINT-480456 STRING:P36102
PaxDb:P36102 PeptideAtlas:P36102 EnsemblFungi:YKL025C GeneID:853843
KEGG:sce:YKL025C CYGD:YKL025c OMA:FYDYVFH NextBio:975058
Genevestigator:P36102 GermOnline:YKL025C Uniprot:P36102
Length = 679
Score = 333 (122.3 bits), Expect = 9.1e-28, P = 9.1e-28
Identities = 66/169 (39%), Positives = 111/169 (65%)
Query: 146 SIDLMARSYSADLRNLILYLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENEL 203
SID M R ++++ YL+S + K+++ DL + + L++ Q + + +E+ L
Sbjct: 511 SIDDM-RQIDDKFKDVLKYLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVL 569
Query: 204 SKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLD 263
S+E+ENGRLFRL+ KL I R E +D WSE+G ++ + LF DY+ HQV +G+P +D
Sbjct: 570 SRELENGRLFRLVNKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMD 629
Query: 264 MSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELS 312
++H++ CLNKLDAG QEK+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 630 LTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSIT 678
Score = 322 (118.4 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 61/151 (40%), Positives = 102/151 (67%)
Query: 326 YLLSVH--QKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGT 383
YL+S + K+++ DL + + L++ Q + + +E+ LS+E+ENGRLFRL+ KL
Sbjct: 528 YLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLVNKLNC 587
Query: 384 INERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEK 443
I R E +D WSE+G ++ + LF DY+ HQV +G+P +D++H++ CLNKLDAG QEK
Sbjct: 588 IFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEK 647
Query: 444 ICLMSRDEQSVLVVSYAELKQCLDQSFHELS 474
+ L++ DE + +++SY ELK ++ +F ++
Sbjct: 648 LMLVTPDELNCIIISYKELKDLIESTFRSIT 678
>POMBASE|SPAC1B1.04c [details] [associations]
symbol:SPAC1B1.04c "poly(A)-specific ribonuclease
complex subunit Pan3 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006301 "postreplication repair" evidence=ISO] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=ISO]
[GO:0031251 "PAN complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR011009 PROSITE:PS50103
PomBase:SPAC1B1.04c GO:GO:0005829 GO:GO:0005739 EMBL:CU329670
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0016772 GO:GO:0006301
GO:GO:0031124 GO:GO:0031251 PIR:T38017 RefSeq:NP_594234.2
EnsemblFungi:SPAC1B1.04c.1 GeneID:2542552 eggNOG:NOG260889
OrthoDB:EOG4XKZJ1 NextBio:20803604 Uniprot:O13865
Length = 681
Score = 229 (85.7 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 70/218 (32%), Positives = 119/218 (54%)
Query: 117 QDDLTALGKLILAM---TCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
++D +G ++LA+ T ++ + +L T + + S A L LI L+ + R
Sbjct: 463 RNDCRDVGLILLALATDTENVTLSTAKAHL-TRLKTIV-STDASLVELIEVLIFNEELR- 519
Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
+ L+P + + ++V L D E L++++EN RL RLL+KL +++RPE DP
Sbjct: 520 IQTLLPTMLSYMVNNYESVLLMEDVYETYLAEQVENDRLLRLLLKLEFLDDRPEYVDDPD 579
Query: 234 WSETGDRYMLKLFRDYLLHQVQ--EDG-------------RPWLDMSHIVHCLNKLDAGT 278
WS +G ++++LFR Y+ QVQ +D R L+ +H++ CLNKLDAGT
Sbjct: 580 WSASGVYFVIRLFRKYMF-QVQTIDDASKKPTLQSTTTPPRKLLNKAHLLSCLNKLDAGT 638
Query: 279 QEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
E+I L DE + +++S+ E+K ++ +F EL S
Sbjct: 639 DEQILL--EDEFTRIIMSFKEVKTTINTAFMELERRCS 674
Score = 221 (82.9 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 57/167 (34%), Positives = 96/167 (57%)
Query: 327 LLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINE 386
+L +++ + L+P + + ++V L D E L++++EN RL RLL+KL +++
Sbjct: 511 VLIFNEELRIQTLLPTMLSYMVNNYESVLLMEDVYETYLAEQVENDRLLRLLLKLEFLDD 570
Query: 387 RPELNLDPTWSETGDRYMLKLFRDYLLHQVQ--EDG-------------RPWLDMSHIVH 431
RPE DP WS +G ++++LFR Y+ QVQ +D R L+ +H++
Sbjct: 571 RPEYVDDPDWSASGVYFVIRLFRKYMF-QVQTIDDASKKPTLQSTTTPPRKLLNKAHLLS 629
Query: 432 CLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSAS 478
CLNKLDAGT E+I L DE + +++S+ E+K ++ +F EL S
Sbjct: 630 CLNKLDAGTDEQILL--EDEFTRIIMSFKEVKTTINTAFMELERRCS 674
Score = 41 (19.5 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 307 SFHELSSSASLTPKSTLP 324
+ H L+ SAS P+ ++P
Sbjct: 193 NLHSLTRSASFVPQPSVP 210
Score = 37 (18.1 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 104 PELPLEVDNYHDL 116
P+LP V +YH L
Sbjct: 269 PKLPSHVLSYHSL 281
>CGD|CAL0004671 [details] [associations]
symbol:PAN3 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031251 "PAN complex" evidence=IEA] [GO:0031124 "mRNA 3'-end
processing" evidence=IEA] [GO:0006301 "postreplication repair"
evidence=IEA] [GO:0004535 "poly(A)-specific ribonuclease activity"
evidence=IEA] InterPro:IPR000571 InterPro:IPR000719
InterPro:IPR011009 PROSITE:PS50011 PROSITE:PS50103 CGD:CAL0004671
GO:GO:0005524 GO:GO:0005737 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0008270 GO:GO:0006397 GO:GO:0003676 GO:GO:0004672
EMBL:AACQ01000012 EMBL:AACQ01000011 eggNOG:NOG260889
RefSeq:XP_721918.1 RefSeq:XP_722079.1 ProteinModelPortal:Q5AK10
STRING:Q5AK10 GeneID:3636333 GeneID:3636464 KEGG:cal:CaO19.11493
KEGG:cal:CaO19.4010 KO:K12572 Uniprot:Q5AK10
Length = 698
Score = 185 (70.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 54/195 (27%), Positives = 103/195 (52%)
Query: 119 DLTALGKLILAMTCRSLMAVQRE--NLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVD 176
D+ +GK+++ + L R+ N+ S+ + + S ++ N + L + D
Sbjct: 510 DIQKVGKVLMELAILLLPVNMRQSNNIYNSLKA-STNLSEEIINNLQELNDLDTASGEFD 568
Query: 177 LMPM---IGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
L + + + +D++Q D +E +L+ E+EN RLFRL+ KL + D +
Sbjct: 569 LNEFSQRLTPKMFNIIDSLQNSSDFIEGQLTSELENARLFRLMTKLNYLIH------DNS 622
Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
SE D+ ++KLF +Y+ + + + ++++ ++ LNKLD G EKI L++ DE +
Sbjct: 623 NSEN-DK-IIKLFLNYVYNCYDSNNKKVINLNKVLINLNKLDCGIDEKILLVNNDE--CI 678
Query: 294 VVSYAELKQCLDQSF 308
++SY ELK+ +D F
Sbjct: 679 IISYKELKEIIDTKF 693
Score = 178 (67.7 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 42/125 (33%), Positives = 75/125 (60%)
Query: 346 RYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYML 405
+ + +D++Q D +E +L+ E+EN RLFRL+ KL + D + SE D+ ++
Sbjct: 579 KMFNIIDSLQNSSDFIEGQLTSELENARLFRLMTKLNYLIH------DNSNSEN-DK-II 630
Query: 406 KLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQC 465
KLF +Y+ + + + ++++ ++ LNKLD G EKI L++ DE +++SY ELK+
Sbjct: 631 KLFLNYVYNCYDSNNKKVINLNKVLINLNKLDCGIDEKILLVNNDE--CIIISYKELKEI 688
Query: 466 LDQSF 470
+D F
Sbjct: 689 IDTKF 693
Score = 81 (33.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 27/101 (26%), Positives = 43/101 (42%)
Query: 21 APSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTM--H---PGTPPHVRHKPPNAATVDHS 75
AP+ G+E PG P D A ++ P Y + H P PP + P +
Sbjct: 233 APTPGSETPGPVLP---DSAGAAAAAANQPMYPLQYHLYAPAPPPRLTI-PLQPYETNSQ 288
Query: 76 SFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDL 116
+ ++ ++R + KN +L S + PE V+ YH L
Sbjct: 289 AMFIPNDLREYLHKKNEASLQSLSHSNLPE---HVNQYHSL 326
>POMBASE|SPBC336.14c [details] [associations]
symbol:ppk26 "serine/threonine protein kinase, PAN
complex subunit, Ppk26" species:4896 "Schizosaccharomyces pombe"
[GO:0004674 "protein serine/threonine kinase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006301 "postreplication
repair" evidence=ISO] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031124 "mRNA
3'-end processing" evidence=ISO] [GO:0031251 "PAN complex"
evidence=ISO] InterPro:IPR000571 InterPro:IPR000719
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS50011
PROSITE:PS50103 PomBase:SPBC336.14c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007165 GO:GO:0046872 EMBL:CU329671
SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0008270
GenomeReviews:CU329671_GR GO:GO:0003676 GO:GO:0006301 GO:GO:0031124
GO:GO:0031251 eggNOG:NOG260889 KO:K12572 OrthoDB:EOG45F0Z0
PIR:T40252 RefSeq:NP_596134.1 ProteinModelPortal:Q9UST1
EnsemblFungi:SPBC336.14c.1 GeneID:2540231 KEGG:spo:SPBC336.14c
OMA:NERPEFA NextBio:20801362 Uniprot:Q9UST1
Length = 589
Score = 198 (74.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 49/164 (29%), Positives = 87/164 (53%)
Query: 153 SYSADLRNLILYLLSV--HQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENG 210
+YS + +LY +S K + L I + ++ + + + + +E ++S ++G
Sbjct: 427 TYSREFYKAVLYFVSEVPEDKNLELFLQNHIES-FFPIMSSPYVECEKMERKISDAFQHG 485
Query: 211 RLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHC 270
R F +L K+ I + + + + + ++ L RDYL HQ+ ED P +D+ +++
Sbjct: 486 RFFNILCKIMFIIDNNRASREYPIAREKEISLIYLLRDYLFHQIDEDECPVIDLYQVLNR 545
Query: 271 LNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFH-ELSS 313
L KLDAG + I L+SRDE + VSY ELK LD + E++S
Sbjct: 546 LGKLDAGINQAIALISRDELDCVSVSYGELKAWLDNVYEMEINS 589
Score = 188 (71.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 41/118 (34%), Positives = 68/118 (57%)
Query: 359 DSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQE 418
+ +E ++S ++GR F +L K+ I + + + + + ++ L RDYL HQ+ E
Sbjct: 472 EKMERKISDAFQHGRFFNILCKIMFIIDNNRASREYPIAREKEISLIYLLRDYLFHQIDE 531
Query: 419 DGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFH-ELSS 475
D P +D+ +++ L KLDAG + I L+SRDE + VSY ELK LD + E++S
Sbjct: 532 DECPVIDLYQVLNRLGKLDAGINQAIALISRDELDCVSVSYGELKAWLDNVYEMEINS 589
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 487 487 0.00081 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 602 (64 KB)
Total size of DFA: 271 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 46.07u 0.08s 46.15t Elapsed: 00:00:55
Total cpu time: 46.08u 0.08s 46.16t Elapsed: 00:00:57
Start: Thu Aug 15 11:58:43 2013 End: Thu Aug 15 11:59:40 2013