Query psy12820
Match_columns 156
No_of_seqs 234 out of 1715
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 20:41:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12820.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12820hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1djx_A PLC-D1, phosphoinositid 100.0 4.4E-45 1.5E-49 299.7 14.1 152 2-155 440-596 (624)
2 3ohm_B 1-phosphatidylinositol- 100.0 1.5E-43 5.1E-48 297.5 14.0 146 2-155 668-817 (885)
3 2zkm_X 1-phosphatidylinositol- 100.0 2.6E-43 9E-48 295.3 13.7 146 2-155 621-771 (799)
4 3qr0_A Phospholipase C-beta (P 100.0 3.5E-43 1.2E-47 293.8 13.6 146 2-155 593-743 (816)
5 2z0u_A WW domain-containing pr 99.8 9.1E-22 3.1E-26 135.9 6.5 97 57-154 42-141 (155)
6 2b3r_A Phosphatidylinositol-4- 99.8 4.6E-21 1.6E-25 129.3 9.7 98 56-155 18-118 (134)
7 2dmh_A Myoferlin; beta-sandwic 99.8 2.9E-20 1E-24 125.8 9.5 92 56-154 5-99 (140)
8 3fbk_A RGS3, RGP3, regulator o 99.8 1.6E-20 5.5E-25 129.2 8.0 98 56-155 25-124 (153)
9 3b7y_A E3 ubiquitin-protein li 99.8 5.1E-20 1.7E-24 126.5 10.5 97 56-154 18-115 (153)
10 1rlw_A Phospholipase A2, CALB 99.8 3E-20 1E-24 123.6 9.0 94 57-155 2-99 (126)
11 1a25_A CALB, protein kinase C 99.8 3.1E-20 1.1E-24 127.1 9.1 96 57-154 30-127 (149)
12 3rdl_A Protein kinase C alpha 99.8 3.6E-20 1.2E-24 124.8 8.6 95 57-153 15-111 (137)
13 2cm5_A Rabphilin-3A; protein t 99.8 9.1E-20 3.1E-24 126.9 10.8 95 57-153 36-133 (166)
14 3pyc_A E3 ubiquitin-protein li 99.8 5.7E-20 2E-24 123.3 9.3 91 56-153 3-97 (132)
15 2chd_A Rabphilin-3A, exophilin 99.8 3.4E-20 1.2E-24 125.9 8.0 97 57-155 28-128 (142)
16 1ugk_A Synaptotagmin IV, KIAA1 99.8 1.3E-19 4.5E-24 122.4 10.8 95 57-155 21-120 (138)
17 3n5a_A Synaptotagmin-7; calciu 99.8 4.5E-20 1.5E-24 124.4 8.5 94 58-153 16-112 (138)
18 1w15_A Synaptotagmin IV; metal 99.8 6.6E-20 2.2E-24 126.0 8.8 94 57-152 29-125 (153)
19 3f04_A Synaptotagmin-1; C2A, c 99.8 4.3E-20 1.5E-24 125.5 7.6 95 57-155 33-130 (143)
20 3fdw_A Synaptotagmin-like prot 99.8 4.3E-20 1.5E-24 126.3 7.1 95 57-153 22-120 (148)
21 2fk9_A Protein kinase C, ETA t 99.8 7E-20 2.4E-24 126.6 8.1 90 56-153 27-127 (157)
22 1rsy_A Synaptotagmin I; calciu 99.8 8.2E-20 2.8E-24 125.5 8.3 94 57-154 41-137 (152)
23 3m7f_B E3 ubiquitin-protein li 99.8 2.3E-19 7.9E-24 126.1 10.6 97 56-154 6-103 (176)
24 2bwq_A Regulating synaptic mem 99.8 1E-19 3.5E-24 121.4 8.4 95 58-154 18-118 (129)
25 2d8k_A Synaptotagmin VII; exoc 99.8 1.2E-19 4.2E-24 123.0 8.9 95 57-155 25-123 (141)
26 1tjx_A Similar to synaptotagmi 99.8 1.5E-19 5.2E-24 124.9 9.4 95 57-153 24-121 (159)
27 2dmg_A KIAA1228 protein; beta- 99.8 1.1E-19 3.8E-24 123.3 8.5 95 57-154 23-122 (142)
28 1wfj_A Putative elicitor-respo 99.8 2.2E-19 7.5E-24 120.9 9.4 91 56-153 8-99 (136)
29 3kwu_A MUNC13-1; calcium bindi 99.8 4E-19 1.4E-23 121.3 10.9 91 56-154 15-117 (148)
30 1gmi_A Protein kinase C, epsil 99.8 6.9E-20 2.3E-24 123.6 6.9 91 56-154 4-106 (136)
31 2ep6_A MCTP2 protein; beta san 99.8 6.2E-20 2.1E-24 123.3 6.6 92 56-155 11-103 (133)
32 2enp_A B/K protein; C2 type 1, 99.8 1.4E-19 5E-24 123.5 8.0 93 58-154 26-128 (147)
33 1wfm_A Synaptotagmin XIII; C2 99.8 4.3E-19 1.5E-23 120.1 10.2 93 57-154 25-119 (138)
34 2nq3_A Itchy homolog E3 ubiqui 99.8 3E-19 1E-23 125.4 9.0 89 56-153 34-123 (173)
35 1v27_A Regulating synaptic mem 99.8 1.2E-19 4E-24 122.8 6.3 95 58-154 21-121 (141)
36 2q3x_A Regulating synaptic mem 99.8 1.7E-19 6E-24 126.2 7.0 95 57-154 29-126 (171)
37 2cjt_A UNC-13 homolog A, MUNC1 99.8 8E-19 2.7E-23 117.9 8.3 86 57-154 4-89 (131)
38 1rh8_A Piccolo protein; beta-s 99.8 1.1E-19 3.9E-24 123.2 3.1 97 57-154 17-125 (142)
39 2r83_A Synaptotagmin-1; C2A-C2 99.7 1.1E-17 3.9E-22 125.2 10.1 94 57-154 18-114 (284)
40 2cjs_A UNC-13 homolog A, MUNC1 99.7 1.3E-17 4.4E-22 116.4 8.0 86 57-154 13-98 (167)
41 2r83_A Synaptotagmin-1; C2A-C2 99.7 3E-17 1E-21 122.9 10.5 95 57-153 149-246 (284)
42 1cjy_A CPLA2, protein (cytosol 99.7 1.1E-17 3.9E-22 139.1 7.8 107 43-154 3-113 (749)
43 3nsj_A Perforin-1; pore formin 99.7 1.5E-16 5.3E-21 128.6 12.8 117 22-151 364-481 (540)
44 3l9b_A Otoferlin; C2-domain, b 99.7 4.9E-17 1.7E-21 109.3 7.5 87 57-153 20-108 (144)
45 1dqv_A Synaptotagmin III; beta 99.7 5.4E-17 1.9E-21 122.5 8.0 89 57-149 19-110 (296)
46 3jzy_A Intersectin 2; C2 domai 99.7 8.2E-17 2.8E-21 129.4 9.3 92 56-154 385-477 (510)
47 1dqv_A Synaptotagmin III; beta 99.7 3.3E-17 1.1E-21 123.7 3.3 95 57-153 151-248 (296)
48 3pfq_A PKC-B, PKC-beta, protei 99.5 9.9E-15 3.4E-19 121.1 7.7 96 57-154 171-268 (674)
49 3bxj_A RAS GTPase-activating p 99.4 1.6E-14 5.6E-19 115.7 -0.1 89 56-154 9-103 (483)
50 2enj_A NPKC-theta, protein kin 98.5 2.6E-07 9E-12 61.2 6.8 88 58-154 10-100 (138)
51 1yrk_A NPKC-delta, protein kin 98.5 3.8E-07 1.3E-11 59.6 7.3 87 59-154 7-95 (126)
52 3hhm_A Phosphatidylinositol-4, 96.9 0.0071 2.4E-07 52.6 10.4 93 58-152 355-454 (1091)
53 2wxf_A Phosphatidylinositol-4, 96.8 0.0076 2.6E-07 51.8 10.0 92 58-152 217-323 (940)
54 3l4c_A Dedicator of cytokinesi 96.8 0.062 2.1E-06 38.4 12.6 56 95-151 77-138 (220)
55 1e7u_A Phosphatidylinositol 3- 96.2 0.025 8.5E-07 48.8 8.9 93 58-152 218-329 (961)
56 2y3a_A Phosphatidylinositol-4, 95.3 0.014 4.7E-07 51.0 4.2 92 58-152 353-469 (1092)
57 2yrb_A Protein fantom; beta sa 50.1 14 0.00047 24.8 3.0 90 56-153 16-116 (156)
58 2qzq_A Axin interactor, dorsal 48.9 56 0.0019 21.7 6.1 96 58-155 14-115 (152)
59 3to5_A CHEY homolog; alpha(5)b 25.9 24 0.00083 22.5 1.1 13 26-38 107-119 (134)
60 2r25_B Osmosensing histidine p 24.5 25 0.00086 21.5 1.0 12 27-38 102-113 (133)
61 3f6p_A Transcriptional regulat 23.8 26 0.00088 21.0 0.9 13 26-38 93-105 (120)
62 3h1g_A Chemotaxis protein CHEY 22.9 31 0.0011 20.9 1.2 12 27-38 102-113 (129)
63 1dz3_A Stage 0 sporulation pro 22.7 35 0.0012 20.6 1.4 12 27-38 98-109 (130)
64 1dbw_A Transcriptional regulat 22.4 29 0.001 20.8 1.0 12 27-38 96-107 (126)
65 1dcf_A ETR1 protein; beta-alph 21.7 33 0.0011 20.9 1.1 13 26-38 103-115 (136)
66 2lpm_A Two-component response 21.5 19 0.00064 22.8 -0.1 12 27-38 97-108 (123)
67 2a9o_A Response regulator; ess 21.1 33 0.0011 20.2 1.0 12 27-38 93-104 (120)
68 2pl1_A Transcriptional regulat 21.0 33 0.0011 20.2 1.0 13 26-38 92-104 (121)
69 3gl9_A Response regulator; bet 20.8 33 0.0011 20.6 1.0 13 26-38 96-108 (122)
70 1xhf_A DYE resistance, aerobic 20.7 34 0.0012 20.3 1.0 12 27-38 95-106 (123)
71 1zgz_A Torcad operon transcrip 20.5 34 0.0012 20.2 1.0 12 27-38 94-105 (122)
72 1koe_A Endostatin; angiogenesi 20.3 32 0.0011 23.4 0.9 17 107-123 104-120 (172)
No 1
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=100.00 E-value=4.4e-45 Score=299.74 Aligned_cols=152 Identities=32% Similarity=0.555 Sum_probs=138.3
Q ss_pred ceeeeecCcccCChhhhccccccccCCceeEEecCCcccCC--CCCCCCCCCCCceeeEEEEEEEeeeeecccCC---CC
Q psy12820 2 LREFTYNRQSVINKAMQVNHAKFRMNGGCGYLLRPAFMFSE--SYDPYDPTSLVGVTRVKVLLRVLAARHLTRSG---RC 76 (156)
Q Consensus 2 ~~~valN~q~t~d~~m~~n~~~F~~ng~~GyvlKP~~l~~~--~~~p~~~~~~~~~~~~~L~v~v~~a~~L~~~~---~~ 76 (156)
.|||||||| |+|++||||+|||+.||+|||||||++||.. .|+|......++..+..|+|+|++|++|+..+ .+
T Consensus 440 ~QmvAlN~Q-t~d~~m~ln~g~F~~ng~~GYvlKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Vi~A~~L~~~d~~~~~ 518 (624)
T 1djx_A 440 CQIVALNFQ-TPGPEMDVYLGCFQDNGGCGYVLKPAFLRDPNTTFNSRALTQGPWWRPERLRVRIISGQQLPKVNKNKNS 518 (624)
T ss_dssp CCEEEECTT-CCSHHHHHHHHHHHSGGGCSEEECCGGGGCTTCCCCTTSCCSSTTCCCEEEEEEEEEEESCCCCSSCSSS
T ss_pred ceeeeeccc-CCchHHhHHHHHhhcCCCCccEECCHHHcCCCCCcCcccccccCCccceEEEEEEEEcCCCCcccccccC
Confidence 599999999 9999999999999999999999999999987 58887765556677899999999999999876 57
Q ss_pred CCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEEecCCCCCCceEEEEEEECCCCCC
Q psy12820 77 TTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDEDMFGDSNFIGQATYPVYTNRF 155 (156)
Q Consensus 77 ~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~~~~~~~~~iG~~~i~l~~l~~ 155 (156)
.+||||+|.+.+.+.+.. ++||+++++||+||+|||+|.|.+..++++.|+|.|||+|..+++++||++++||.+|++
T Consensus 519 ~~DPYV~V~l~g~~~d~~-~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~ 596 (624)
T 1djx_A 519 IVDPKVIVEIHGVGRDTG-SRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQ 596 (624)
T ss_dssp CCCEEEEEEEESSGGGCE-EEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCC
T ss_pred CCCcEEEEEEecCCCCcc-eeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCC
Confidence 899999999988665556 889999999889999999999999999889999999999999999999999999999874
No 2
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=297.51 Aligned_cols=146 Identities=34% Similarity=0.593 Sum_probs=131.3
Q ss_pred ceeeeecCcccCChhhhccccccccCCceeEEecCCcccCC--CCCCCCCCCCCceeeEEEEEEEeeeeecccCCCCCCC
Q psy12820 2 LREFTYNRQSVINKAMQVNHAKFRMNGGCGYLLRPAFMFSE--SYDPYDPTSLVGVTRVKVLLRVLAARHLTRSGRCTTS 79 (156)
Q Consensus 2 ~~~valN~q~t~d~~m~~n~~~F~~ng~~GyvlKP~~l~~~--~~~p~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~d 79 (156)
.|||||||| |+|++||||+|||+.||+|||||||.+||.. .|+|.....+++..+.+|+|+|++|++|+.. .+|
T Consensus 668 ~QmVALN~Q-T~d~~m~lN~g~F~~nG~cGYVLKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~~---~~D 743 (885)
T 3ohm_B 668 CQLVALNFQ-TLDVAMQLNAGVFEYNGRSGYLLKPEFMRRPDKSFDPFTEVIVDGIVANALRVKVISGQFLSDR---KVG 743 (885)
T ss_dssp CSEECBCTT-CCSHHHHHHHHHHTTGGGCSEEECCGGGTCTTCCCCTTCSSCCTTCCCEEEEEEEEEEESCCSS---CCC
T ss_pred ceeeeecCC-CCCcccchhhhhhccCCceeeeecCHHHcCCCcCcCCCcCcccCcccceEEEEEEEEeccCccc---CCC
Confidence 599999999 9999999999999999999999999999985 5899876666667788999999999999853 589
Q ss_pred CEEEEEEecCCCCCCceEEeEEecCCCCCCeeCc-eEEEE-EeCCCccEEEEEEEecCCCCCCceEEEEEEECCCCCC
Q psy12820 80 PFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNE-SCEFT-VHNPEMALLRFVCQDEDMFGDSNFIGQATYPVYTNRF 155 (156)
Q Consensus 80 pyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e-~f~f~-v~~~~~~~l~~~V~d~~~~~~~~~iG~~~i~l~~l~~ 155 (156)
|||+|++.|.+.|...++||+++++||+||+||| +|.|. |..++++.|+|.|||+| +++||++++||++|++
T Consensus 744 PYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d----ddfiG~~~lpL~~L~~ 817 (885)
T 3ohm_B 744 IYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG----GKFVGHRILPVSAIRS 817 (885)
T ss_dssp EEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT----TEEEEEEEEETTTCCC
T ss_pred cEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC----ccEEeeEEEEHHHcCC
Confidence 9999999987766654689999999889999999 69999 88899999999999987 7899999999999975
No 3
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=100.00 E-value=2.6e-43 Score=295.26 Aligned_cols=146 Identities=29% Similarity=0.510 Sum_probs=131.1
Q ss_pred ceeeeecCcccCChhhhccccccccCCceeEEecCCcccCC--CCCCCCCCCCCceeeEEEEEEEeeeeecccCCCCCCC
Q psy12820 2 LREFTYNRQSVINKAMQVNHAKFRMNGGCGYLLRPAFMFSE--SYDPYDPTSLVGVTRVKVLLRVLAARHLTRSGRCTTS 79 (156)
Q Consensus 2 ~~~valN~q~t~d~~m~~n~~~F~~ng~~GyvlKP~~l~~~--~~~p~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~d 79 (156)
.|||||||| |+|++||||+|||+.||+|||||||++||.. .|+|.....+++..+.+|+|+|++|++|+. +.+|
T Consensus 621 ~QmVAlN~Q-t~d~~m~ln~g~F~~nG~cGYVlKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visa~~L~~---~~~D 696 (799)
T 2zkm_X 621 CQMVALNFQ-TMDLPMQQNMAVFEFNGQSGYLLKHEFMRRPDKQFNPFSVDRIDVVVATTLSITVISGQFLSE---RSVR 696 (799)
T ss_dssp CSEECBCTT-CCSHHHHHHHHHTTTGGGCSEEECCGGGTCTTSCCCTTSCCTTTTTTCEEEEEEEEEEESCCS---SCCC
T ss_pred ceEeeeccc-cCchHHHHHHhhhhccCCCCceECCHHHhCCCccCCCcccccccceeeeeEEEEEEeccccCc---cCCC
Confidence 599999999 9999999999999999999999999999976 688987666667778899999999999985 4689
Q ss_pred CEEEEEEecCCCCCCceEEeE-EecCCCCCCeeCc-eEEE-EEeCCCccEEEEEEEecCCCCCCceEEEEEEECCCCCC
Q psy12820 80 PFVEVEVLGADYDTGLKLTTK-TVSDNGFNPTWNE-SCEF-TVHNPEMALLRFVCQDEDMFGDSNFIGQATYPVYTNRF 155 (156)
Q Consensus 80 pyv~v~l~~~~~~~~~~~kT~-~~~~~~~nP~w~e-~f~f-~v~~~~~~~l~~~V~d~~~~~~~~~iG~~~i~l~~l~~ 155 (156)
|||+|++.|.+.+...++||+ ++++||+||+||| +|.| .+..++++.|+|.|||++ +++||++++||++|++
T Consensus 697 PYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d----~d~iG~~~ipl~~L~~ 771 (799)
T 2zkm_X 697 TYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG----NKFLGHRIIPINALNS 771 (799)
T ss_dssp EEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT----TEEEEEEEEEGGGBCC
T ss_pred cEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC----CCccceEeeehhhcCC
Confidence 999999998766654478999 8988889999999 7999 899999999999999986 6899999999999875
No 4
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=100.00 E-value=3.5e-43 Score=293.81 Aligned_cols=146 Identities=32% Similarity=0.570 Sum_probs=130.8
Q ss_pred ceeeeecCcccCChhhhccccccccCCceeEEecCCcccCC--CCCCCCCCCCCceeeEEEEEEEeeeeecccCCCCCCC
Q psy12820 2 LREFTYNRQSVINKAMQVNHAKFRMNGGCGYLLRPAFMFSE--SYDPYDPTSLVGVTRVKVLLRVLAARHLTRSGRCTTS 79 (156)
Q Consensus 2 ~~~valN~q~t~d~~m~~n~~~F~~ng~~GyvlKP~~l~~~--~~~p~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~d 79 (156)
.|||||||| |+|.+||||+|||+.||+|||||||.+||.. .|+|.....+++..+..|+|+|++|++|+.. .+|
T Consensus 593 ~QmVALN~Q-T~d~~m~LN~g~F~~nG~cGYVLKP~~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~~---~~D 668 (816)
T 3qr0_A 593 CQLVALNFQ-CFDIAMCVNLGVFEYNGCSGYLLKPEFMRKLDKRFDPFTESTVDGVVAGTIEIKIISAQFLSDK---QIS 668 (816)
T ss_dssp CSEECBCTT-CCSHHHHHHHHHTTTTTTCSEEECCHHHHCTTCCCCTTCCSCCTTSCCEEEEEEEEEEECCCSS---CCC
T ss_pred ceEEeecCc-CCChhhhhhhhhhccCCceeeeecChHhcCCCcccCCCCCCCcCCccceEEEEEEEEcccCCCC---CCC
Confidence 599999999 9999999999999999999999999999985 5889877666667788999999999999853 589
Q ss_pred CEEEEEEecCCCCCC-ceEEeEEecCCCCCCeeCce-EEEE-EeCCCccEEEEEEEecCCCCCCceEEEEEEECCCCCC
Q psy12820 80 PFVEVEVLGADYDTG-LKLTTKTVSDNGFNPTWNES-CEFT-VHNPEMALLRFVCQDEDMFGDSNFIGQATYPVYTNRF 155 (156)
Q Consensus 80 pyv~v~l~~~~~~~~-~~~kT~~~~~~~~nP~w~e~-f~f~-v~~~~~~~l~~~V~d~~~~~~~~~iG~~~i~l~~l~~ 155 (156)
|||+|++.+.+.+.. .++||+++++||+||+|||+ |.|. +..++++.|+|.|||++ +++||++++||++|++
T Consensus 669 PYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d----ddfiG~~~ipL~~L~~ 743 (816)
T 3qr0_A 669 SYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN----GKFIGHRVMPLDGIKP 743 (816)
T ss_dssp EEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT----SCEEEEEEEESTTCCC
T ss_pred CeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC----CCeeeEEEEEHHHcCC
Confidence 999999998766552 27899999998899999998 9999 88899999999999985 6899999999999985
No 5
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.85 E-value=9.1e-22 Score=135.94 Aligned_cols=97 Identities=14% Similarity=0.106 Sum_probs=82.4
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEEe
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQD 133 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~d 133 (156)
...|+|+|++|++|+..+ .+.+||||++++.+.+.+...++||++++++ +||+|||+|.|.+...++ ..|.|+|||
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~t-lnP~wnE~F~f~v~~~~l~~~~L~~~V~d 120 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDAS-DTLVFNEVFWVSMSYPALHQKTLRVDVCT 120 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECC-SSEEEEEEEEEECCHHHHHHCEEEEEEEE
T ss_pred CCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCC-CCCccccEEEEEcCHHHhCcCEEEEEEEE
Confidence 357999999999999876 6789999999997533232237899999998 999999999999875433 489999999
Q ss_pred cCCCCCCceEEEEEEECCCCC
Q psy12820 134 EDMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 134 ~~~~~~~~~iG~~~i~l~~l~ 154 (156)
+|..+++++||++.++++++.
T Consensus 121 ~d~~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 121 TDRSHLEECLGGAQISLAEVC 141 (155)
T ss_dssp ECTTSCEEEEEEEEEECTTSC
T ss_pred CCCCCCCcEEEEEEEEHHHcc
Confidence 999999999999999999884
No 6
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.85 E-value=4.6e-21 Score=129.26 Aligned_cols=98 Identities=19% Similarity=0.308 Sum_probs=82.1
Q ss_pred eeEEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEE-EeCC--CccEEEEEEE
Q psy12820 56 TRVKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFT-VHNP--EMALLRFVCQ 132 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~-v~~~--~~~~l~~~V~ 132 (156)
....|.|+|++|++|+....+.+||||++.+...+.... ++||++++++ +||+|||+|.|. +... ....|.|+||
T Consensus 18 ~~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~-~~kT~v~~~t-~nP~wnE~f~f~~v~~~~l~~~~L~~~V~ 95 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTS-KRKTKISRKT-RNPTFNEMLVYSGYSKETLRQRELQLSVL 95 (134)
T ss_dssp ETTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCC-CEECCCCCSC-SSCEEEEEEEEESCCHHHHTTCEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCc-eecCCcCcCC-CCCCCccEEEECCcCHHHhCcCEEEEEEE
Confidence 446899999999999975577899999999875322233 8899999987 999999999998 7643 2358999999
Q ss_pred ecCCCCCCceEEEEEEECCCCCC
Q psy12820 133 DEDMFGDSNFIGQATYPVYTNRF 155 (156)
Q Consensus 133 d~~~~~~~~~iG~~~i~l~~l~~ 155 (156)
|++..+++++||++.++++++..
T Consensus 96 d~d~~~~~~~lG~~~i~l~~l~~ 118 (134)
T 2b3r_A 96 SAESLRENFFLGGITLPLKDFNL 118 (134)
T ss_dssp ECCSSSCCEEEEEEEEEGGGSCT
T ss_pred ECCCCCCCcEEEEEEEEhhhccC
Confidence 99999999999999999998753
No 7
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=2.9e-20 Score=125.83 Aligned_cols=92 Identities=25% Similarity=0.355 Sum_probs=80.3
Q ss_pred eeEEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCC---CccEEEEEEE
Q psy12820 56 TRVKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNP---EMALLRFVCQ 132 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~---~~~~l~~~V~ 132 (156)
....|.|+|++|++|+..+.+.+||||++++.+ . ++||++++++ +||+|||+|.|.+..+ ....|.|+||
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~-----~-~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~~~~l~i~V~ 77 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKFGKPDPIVSVIFKD-----E-KKKTKKVDNE-LNPVWNEILEFDLRGIPLDFSSSLGIIVK 77 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSSSCCCEEEEEECSS-----C-EEECCCCCSC-SSCEEEEEEEEECSSCCCCTTCEEEEEEE
T ss_pred CCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECC-----E-eEEeeeecCC-CCCccCcEEEEEecccccCCCCEEEEEEE
Confidence 346899999999999987668899999999752 3 7899999987 9999999999998764 3468999999
Q ss_pred ecCCCCCCceEEEEEEECCCCC
Q psy12820 133 DEDMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 133 d~~~~~~~~~iG~~~i~l~~l~ 154 (156)
|++..+++++||++.+++.++.
T Consensus 78 d~d~~~~~~~lG~~~i~l~~l~ 99 (140)
T 2dmh_A 78 DFETIGQNKLIGTATVALKDLT 99 (140)
T ss_dssp ETTCSSSCCCCEEEEEEGGGTC
T ss_pred ECCCCCCCceEEEEEEEHHHhc
Confidence 9999999999999999998874
No 8
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.83 E-value=1.6e-20 Score=129.20 Aligned_cols=98 Identities=20% Similarity=0.281 Sum_probs=82.2
Q ss_pred eeEEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc-cEEEEEEEec
Q psy12820 56 TRVKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM-ALLRFVCQDE 134 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~-~~l~~~V~d~ 134 (156)
....|.|+|++|++|+..+.+.+||||++.+.+...... +++|++++++ +||+|||+|.|.+...+. ..|.|+|||+
T Consensus 25 ~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~-~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 102 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLR-HQKTQTVPDC-RDPAFHEHFFFPVQEEDDQKRLLVTVWNR 102 (153)
T ss_dssp SSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTT-CEECCCCTTC-SSCEEEEEEEEECCGGGTTSEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCcc-EEeccccCCC-CCCccccEEEEecccHHhCCEEEEEEEeC
Confidence 346899999999999987778899999999875433334 8899999988 999999999999854333 4699999999
Q ss_pred CCCCC-CceEEEEEEECCCCCC
Q psy12820 135 DMFGD-SNFIGQATYPVYTNRF 155 (156)
Q Consensus 135 ~~~~~-~~~iG~~~i~l~~l~~ 155 (156)
+..++ +++||++.+++++|..
T Consensus 103 d~~~~~d~~lG~~~i~l~~l~~ 124 (153)
T 3fbk_A 103 ASQSRQSGLIGCMSFGVKSLLT 124 (153)
T ss_dssp CSSGGGCEEEEEEEEEHHHHTC
T ss_pred CCCCCCCcEEEEEEEEHHHhcC
Confidence 98876 8999999999988763
No 9
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.83 E-value=5.1e-20 Score=126.47 Aligned_cols=97 Identities=29% Similarity=0.455 Sum_probs=77.5
Q ss_pred eeEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEEec
Q psy12820 56 TRVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDE 134 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~ 134 (156)
....|+|+|++|++|+..+ .+.+||||++.+.+.......+++|++++++ +||+|||+|.|.+..+ ...|.|+|||+
T Consensus 18 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~-~~~l~~~V~d~ 95 (153)
T 3b7y_A 18 NSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKS-LNPKWNEEILFRVHPQ-QHRLLFEVFDE 95 (153)
T ss_dssp TCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSC-SSCCCCEEEEEEECTT-TCEEEEEEEEC
T ss_pred CccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCC-CCCCCCCEEEEEecCC-CCEEEEEEEEC
Confidence 4578999999999999876 6789999999987421111237899999998 9999999999998864 46899999999
Q ss_pred CCCCCCceEEEEEEECCCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l~ 154 (156)
+..+++++||++.+++.++.
T Consensus 96 d~~~~d~~iG~~~i~l~~l~ 115 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLP 115 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCC
T ss_pred CCCcCCCeeEEEEEEHHHcc
Confidence 99999999999999999875
No 10
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=3e-20 Score=123.56 Aligned_cols=94 Identities=24% Similarity=0.418 Sum_probs=80.3
Q ss_pred eEEEEEEEeeeeecccC---C-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEE
Q psy12820 57 RVKVLLRVLAARHLTRS---G-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQ 132 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~---~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~ 132 (156)
...|.|+|++|++|+.. + .+.+||||++.+.+.+ .. ++||++++++ +||+|||+|.|.+..++...|.|.||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~--~~-~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~l~i~V~ 77 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP--DS-RKRTRHFNND-INPVWNETFEFILDPNQENVLEITLM 77 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTST--TC-CEECCCCTTC-SSCEEEEEEEEEECTTSCCEEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCC--Cc-eEEccccCCC-CCCcccceEEEEecCCCCCEEEEEEE
Confidence 36799999999999974 2 5789999999986421 23 8899999987 99999999999998777789999999
Q ss_pred ecCCCCCCceEEEEEEECCCCCC
Q psy12820 133 DEDMFGDSNFIGQATYPVYTNRF 155 (156)
Q Consensus 133 d~~~~~~~~~iG~~~i~l~~l~~ 155 (156)
|++..+ +++||++.++++++..
T Consensus 78 d~d~~~-~~~iG~~~i~l~~l~~ 99 (126)
T 1rlw_A 78 DANYVM-DETLGTATFTVSSMKV 99 (126)
T ss_dssp ECCSSC-CEEEEEEEEEGGGSCT
T ss_pred ECCCCC-CceeEEEEEEHHHccC
Confidence 999875 8899999999988753
No 11
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.82 E-value=3.1e-20 Score=127.14 Aligned_cols=96 Identities=22% Similarity=0.408 Sum_probs=81.4
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc-cEEEEEEEec
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM-ALLRFVCQDE 134 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~-~~l~~~V~d~ 134 (156)
...|.|+|++|++|+..+ .+.+||||++.+.+...... ++||++++++ +||+|||+|.|.+...+. ..|.|+|||+
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~-~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 107 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSES-KQKTKTIKCS-LNPEWNETFRFQLKESDKDRRLSVEIWDW 107 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSS-CEECCCCSSC-SSCEEEEEEEEECCSGGGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcc-eEecceeCCC-CCCcCCcEEEEEeccccCCCEEEEEEEEC
Confidence 357999999999999876 67899999999875432233 8899999997 999999999999876543 4899999999
Q ss_pred CCCCCCceEEEEEEECCCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l~ 154 (156)
+..+++++||++.+++.++.
T Consensus 108 d~~~~~~~iG~~~i~l~~l~ 127 (149)
T 1a25_A 108 DLTSRNDFMGSLSFGISELQ 127 (149)
T ss_dssp CSSSCCEEEEEEEEEHHHHT
T ss_pred CCCCCCCEEEEEEEEHHHhC
Confidence 99989999999999987764
No 12
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.82 E-value=3.6e-20 Score=124.83 Aligned_cols=95 Identities=24% Similarity=0.387 Sum_probs=81.3
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc-cEEEEEEEec
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM-ALLRFVCQDE 134 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~-~~l~~~V~d~ 134 (156)
...|.|+|++|++|+..+ .+.+||||++.+.+.+.... +.+|++++++ .||.|||+|.|.+...+. ..|.|+|||+
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~-~~kT~~~~~t-~nP~wne~f~f~~~~~~~~~~l~i~v~d~ 92 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNES-KQKTKTIRST-LNPQWNESFTFKLKPSDKDRRLSVEIWDW 92 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCC-CEECCCCCSC-SSCEEEEEEEEECCGGGGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCe-eecCceEcCC-CCCCcccEEEEEcCchhcCCEEEEEEEEC
Confidence 458999999999999875 67899999999865433344 8899999998 999999999999876544 3899999999
Q ss_pred CCCCCCceEEEEEEECCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTN 153 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l 153 (156)
+..+++++||++.++++++
T Consensus 93 d~~~~~~~iG~~~i~l~~l 111 (137)
T 3rdl_A 93 DRTTRNDFMGSLSFGVSEL 111 (137)
T ss_dssp CSSSCCEEEEEEEEEHHHH
T ss_pred CCCCCCceEEEEEEeHHHh
Confidence 9999999999999998766
No 13
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.82 E-value=9.1e-20 Score=126.94 Aligned_cols=95 Identities=17% Similarity=0.293 Sum_probs=80.3
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEEe
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQD 133 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~d 133 (156)
...|.|+|++|++|+..+ .+.+||||++.+.+.+.... +++|++++++ +||+|||+|.|.+...++ ..|.|+|||
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~-~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~i~V~d 113 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKA-KHKTQIKKKT-LNPEFNEEFFYDIKHSDLAKKSLDISVWD 113 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CC-EEECCCCCSC-SSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred CCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccc-eEeCCcccCC-CCCcccceEEEEcchHhcCCCEEEEEEEE
Confidence 357999999999999876 67899999999875432233 8899999987 999999999999876554 389999999
Q ss_pred cCCCCCCceEEEEEEECCCC
Q psy12820 134 EDMFGDSNFIGQATYPVYTN 153 (156)
Q Consensus 134 ~~~~~~~~~iG~~~i~l~~l 153 (156)
++..+++++||++.+++.++
T Consensus 114 ~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 114 YDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp CCSSSCCEEEEEEEEETTCC
T ss_pred CCCCCCCcEEEeEEEecccC
Confidence 99999999999999999875
No 14
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.82 E-value=5.7e-20 Score=123.32 Aligned_cols=91 Identities=21% Similarity=0.372 Sum_probs=77.6
Q ss_pred eeEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEEec
Q psy12820 56 TRVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDE 134 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~ 134 (156)
...+|+|+|++|++|+..+ .+.+||||++.+.+. .. +++|++++++ +||+|||+|.|.+..++ .|.|+|||+
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~---~~-~~kT~v~~~t-~nP~wne~f~f~v~~~~--~l~~~v~d~ 75 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS---GQ-CHSTDTVKNT-LDPKWNQHYDLYVGKTD--SITISVWNH 75 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT---CC-EEECCCCSSC-SSCEEEEEEEEEEETTC--CEEEEEEEG
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC---Cc-eEECCccCCC-CCCCccCEEEEEeCCCC--EEEEEEEEC
Confidence 4578999999999998876 678999999998432 23 8899999887 99999999999998764 499999999
Q ss_pred CCCCC---CceEEEEEEECCCC
Q psy12820 135 DMFGD---SNFIGQATYPVYTN 153 (156)
Q Consensus 135 ~~~~~---~~~iG~~~i~l~~l 153 (156)
+..++ +++||++.++++++
T Consensus 76 d~~~~~~~d~~lG~~~i~l~~l 97 (132)
T 3pyc_A 76 KKIHKKQGAGFLGCVRLLSNAI 97 (132)
T ss_dssp GGTTSSTTTTEEEEEEECHHHH
T ss_pred CCCCCCCCCCceEEEEEeHHHh
Confidence 98876 78999999997765
No 15
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.82 E-value=3.4e-20 Score=125.86 Aligned_cols=97 Identities=27% Similarity=0.508 Sum_probs=81.1
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEE-EeCCCc--cEEEEEEE
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFT-VHNPEM--ALLRFVCQ 132 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~-v~~~~~--~~l~~~V~ 132 (156)
...|.|+|++|++|+..+ .+.+||||++.+.+... ...++||++++++ +||+|||+|.|. +...+. ..|.|+||
T Consensus 28 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-~~~~~kT~v~~~t-~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 105 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGAS-KSNKLRTKTLRNT-RNPVWNETLQYHGITEEDMQRKTLRISVC 105 (142)
T ss_dssp GTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCS-GGGEEECCCCCSC-SSCEEEEEEEEESCCHHHHHHCEEEEEEE
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCC-CcceeeCCcCCCC-CCCcCcCEEEEcccCHHHccCCEEEEEEE
Confidence 458999999999999876 67899999999875322 2238899999987 999999999998 554332 58999999
Q ss_pred ecCCCCCCceEEEEEEECCCCCC
Q psy12820 133 DEDMFGDSNFIGQATYPVYTNRF 155 (156)
Q Consensus 133 d~~~~~~~~~iG~~~i~l~~l~~ 155 (156)
|++..+++++||++.+++.++..
T Consensus 106 d~d~~~~d~~iG~~~i~l~~l~~ 128 (142)
T 2chd_A 106 DEDKFGHNEFIGETRFSLKKLKA 128 (142)
T ss_dssp EECTTSCEEEEEEEEEEGGGCCT
T ss_pred ECCCCCCCcEEEEEEEEHHHcCC
Confidence 99999989999999999998753
No 16
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.82 E-value=1.3e-19 Score=122.45 Aligned_cols=95 Identities=20% Similarity=0.427 Sum_probs=80.7
Q ss_pred eEEEEEEEeeeeecccCCC--CCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEE-EeCCCc--cEEEEEE
Q psy12820 57 RVKVLLRVLAARHLTRSGR--CTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFT-VHNPEM--ALLRFVC 131 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~~--~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~-v~~~~~--~~l~~~V 131 (156)
...|.|+|++|++|+..+. +.+||||++.+.+. +.. +++|++++++ +||+|||+|.|. +...++ ..|.|+|
T Consensus 21 ~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~--~~~-~~kT~v~~~t-~nP~wne~f~f~~v~~~~~~~~~l~i~V 96 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPE--KKH-KVKTRVLRKT-LDPAFDETFTFYGIPYTQIQELALHFTI 96 (138)
T ss_dssp GTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETT--TCS-EEECCCCSSC-SSCEEEEEEEEECCCSTTGGGCEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecC--CCc-eEecCcCcCC-CCCcEeeEEEEcCcCHHHhccCEEEEEE
Confidence 3579999999999998763 78999999998742 233 8999999987 999999999996 665544 5899999
Q ss_pred EecCCCCCCceEEEEEEECCCCCC
Q psy12820 132 QDEDMFGDSNFIGQATYPVYTNRF 155 (156)
Q Consensus 132 ~d~~~~~~~~~iG~~~i~l~~l~~ 155 (156)
||++..+++++||++.++|.++..
T Consensus 97 ~d~d~~~~~~~lG~~~i~l~~l~~ 120 (138)
T 1ugk_A 97 LSFDRFSRDDIIGEVLIPLSGIEL 120 (138)
T ss_dssp EEECSSCCCCCCEEEEEECTTCCC
T ss_pred EECCCCCCCcEEEEEEEehhHccC
Confidence 999999999999999999998853
No 17
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.82 E-value=4.5e-20 Score=124.40 Aligned_cols=94 Identities=23% Similarity=0.375 Sum_probs=80.2
Q ss_pred EEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEEec
Q psy12820 58 VKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQDE 134 (156)
Q Consensus 58 ~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~d~ 134 (156)
..|.|+|++|++|+..+ .+.+||||++.+.+.+... .+++|++++++ .||+|||+|.|.+...++ ..|.|+|||+
T Consensus 16 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~-~~~kT~~~~~t-~nP~wne~f~f~v~~~~l~~~~l~~~V~d~ 93 (138)
T 3n5a_A 16 NSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRV-EKKKTVTKKRN-LNPIFNESFAFDIPTEKLRETTIIITVMDK 93 (138)
T ss_dssp TEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEE-EEEECCCCSSC-SSCEEEEEEEEECCGGGGGGEEEEEEEEEC
T ss_pred CeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCcc-ceEeCccccCC-CCCcCcceEEEECChhhcCceEEEEEEEEC
Confidence 57999999999999875 6689999999987532222 37899999988 999999999999876654 5899999999
Q ss_pred CCCCCCceEEEEEEECCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTN 153 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l 153 (156)
+..+++++||++.++++++
T Consensus 94 ~~~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 94 DKLSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp CSSSCCEEEEEEEESSSSC
T ss_pred CCCCCCcEEEEEEEccccC
Confidence 9999999999999999875
No 18
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.81 E-value=6.6e-20 Score=125.97 Aligned_cols=94 Identities=22% Similarity=0.268 Sum_probs=76.1
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEEe
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQD 133 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~d 133 (156)
...|.|+|++|++|+..+ .+.+||||++.+.+.+. ...++||++++++ +||+|||+|.|.+...++ ..|.|+|||
T Consensus 29 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~l~v~V~d 106 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKK-RISKKKTHVKKCT-PNAVFNELFVFDIPCESLEEISVEFLVLD 106 (153)
T ss_dssp TTEEEEEEEEEESCC------CCCEEEEEEEEETTE-EEEEEECCCCCSC-SSEEEEEEEEEECCSSSSTTEEEEEEEEE
T ss_pred CCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCe-EeceEecCcccCC-CCCeecceEEEECCHHHhCceEEEEEEEe
Confidence 357999999999999876 67899999999864221 1126799999987 999999999999887655 589999999
Q ss_pred cCCCCCCceEEEEEEECCC
Q psy12820 134 EDMFGDSNFIGQATYPVYT 152 (156)
Q Consensus 134 ~~~~~~~~~iG~~~i~l~~ 152 (156)
++..+++++||++.+++++
T Consensus 107 ~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 107 SERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp CCTTSCCEEEEEEEESTTC
T ss_pred CCCCCCCcEEEEEEECCCC
Confidence 9999999999999999987
No 19
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.81 E-value=4.3e-20 Score=125.49 Aligned_cols=95 Identities=28% Similarity=0.437 Sum_probs=80.9
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEEe
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQD 133 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~d 133 (156)
...|.|+|++|++|+..+ .+.+||||++.+... +.. +++|++++++ .||+|||+|.|.+...++ ..|.|+|||
T Consensus 33 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~--~~~-~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 33 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD--KKK-KFETKVHRKT-LNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp TTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESC--CSC-CEECCCCCSC-SSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECC--CCc-cEECccCcCC-CCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 357999999999998876 678999999998642 233 7899999988 999999999999875443 689999999
Q ss_pred cCCCCCCceEEEEEEECCCCCC
Q psy12820 134 EDMFGDSNFIGQATYPVYTNRF 155 (156)
Q Consensus 134 ~~~~~~~~~iG~~~i~l~~l~~ 155 (156)
++..+++++||++.++|+++..
T Consensus 109 ~d~~~~~~~iG~~~i~l~~l~~ 130 (143)
T 3f04_A 109 FDRFSKHDIIGEFKVPMNTVDF 130 (143)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCT
T ss_pred CCCCCCCceEEEEEEEHHHccC
Confidence 9999999999999999988753
No 20
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.81 E-value=4.3e-20 Score=126.27 Aligned_cols=95 Identities=19% Similarity=0.344 Sum_probs=80.3
Q ss_pred eEEEEEEEeeeeecccCC--CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEE
Q psy12820 57 RVKVLLRVLAARHLTRSG--RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQ 132 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~--~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~ 132 (156)
...|.|+|++|++|+..+ .+.+||||++.+.+.... ..+++|++++++ +||+|||+|.|.+...+. ..|.|+||
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~-~~~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~~~L~~~V~ 99 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSR-QGKRKTSIKRDT-VNPLYDETLRYEIPESLLAQRTLQFSVW 99 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSG-GGEEECCCCSSC-SSCEEEEEEEEECCSTTGGGCEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcc-cCccccccCCCC-CCCcEeeEEEEEeChhHhCceEEEEEEE
Confidence 357999999999999765 578999999998743222 238899999988 999999999999887654 37999999
Q ss_pred ecCCCCCCceEEEEEEECCCC
Q psy12820 133 DEDMFGDSNFIGQATYPVYTN 153 (156)
Q Consensus 133 d~~~~~~~~~iG~~~i~l~~l 153 (156)
|++..+++++||++.++|+++
T Consensus 100 d~d~~~~~~~iG~~~i~l~~l 120 (148)
T 3fdw_A 100 HHGRFGRNTFLGEAEIQMDSW 120 (148)
T ss_dssp EECGGGCEEEEEEEEEEHHHH
T ss_pred ECCCCcCCcEEEEEEEEcccc
Confidence 999998999999999998765
No 21
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.81 E-value=7e-20 Score=126.56 Aligned_cols=90 Identities=20% Similarity=0.162 Sum_probs=76.4
Q ss_pred eeEEEEEEEeeeeecccCC-----------CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc
Q psy12820 56 TRVKVLLRVLAARHLTRSG-----------RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM 124 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~-----------~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~ 124 (156)
....|+|+|++|++|+..+ .+.+||||++.+. .....||++++++ +||+|||+|.|.+.. .
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~-----~~~~~kT~v~~kt-lnP~WNE~F~f~v~~--~ 98 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD-----QVRVGQTSTKQKT-NKPTYNEEFCANVTD--G 98 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEET-----TEEEEECCCCSSC-SSCEEEEEEEEEEEE--E
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEEC-----CEeeEEeeecCCC-CCCccCcEEEEEcCC--C
Confidence 4678999999999998764 2568999999973 2225689998887 999999999999874 3
Q ss_pred cEEEEEEEecCCCCCCceEEEEEEECCCC
Q psy12820 125 ALLRFVCQDEDMFGDSNFIGQATYPVYTN 153 (156)
Q Consensus 125 ~~l~~~V~d~~~~~~~~~iG~~~i~l~~l 153 (156)
..|.|+|||++.++++++||++.|+++++
T Consensus 99 ~~L~~~V~D~d~~~~dd~iG~~~i~l~~l 127 (157)
T 2fk9_A 99 GHLELAVFHETPLGYDHFVANCTLQFQEL 127 (157)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHH
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEEHHHh
Confidence 58999999999999999999999998765
No 22
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=8.2e-20 Score=125.47 Aligned_cols=94 Identities=28% Similarity=0.394 Sum_probs=80.2
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCC--ccEEEEEEEe
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPE--MALLRFVCQD 133 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~--~~~l~~~V~d 133 (156)
...|+|+|++|++|+..+ .+.+||||++.+... +.. +++|++++++ +||+|||+|.|.+..++ ...|.|+|||
T Consensus 41 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~-~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD--KKK-KFETKVHRKT-LNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETT--CCS-CEECCCCTTC-SSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred CCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcC--CCc-eEeccccCCC-CCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 358999999999999876 678999999998732 233 7899999988 99999999999876543 3689999999
Q ss_pred cCCCCCCceEEEEEEECCCCC
Q psy12820 134 EDMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 134 ~~~~~~~~~iG~~~i~l~~l~ 154 (156)
++.++++++||++.+++.++.
T Consensus 117 ~d~~~~~~~iG~~~i~l~~l~ 137 (152)
T 1rsy_A 117 FDRFSKHDIIGEFKVPMNTVD 137 (152)
T ss_dssp CCSSSCCEEEEEEEEEGGGCC
T ss_pred CCCCCCCcEEEEEEEEchhcc
Confidence 999989999999999998874
No 23
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.81 E-value=2.3e-19 Score=126.05 Aligned_cols=97 Identities=26% Similarity=0.411 Sum_probs=75.7
Q ss_pred eeEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEEec
Q psy12820 56 TRVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDE 134 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~ 134 (156)
....|.|+|++|++|+..+ .+.+||||++.+.+.......+++|++++++ +||+|||+|.|.+... ...|.|.|||+
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t-~nP~Wne~f~f~v~~~-~~~L~~~V~d~ 83 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKS-LNPKWNEEILFRVLPQ-RHRILFEVFDE 83 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSC-SSCEEEEEEEEEECTT-TCEEEEEEEEC
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCC-CCCcccceEEEEEcCC-CCEEEEEEEEC
Confidence 3578999999999998875 6789999999987532111136899999987 9999999999998854 46899999999
Q ss_pred CCCCCCceEEEEEEECCCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l~ 154 (156)
+.++++++||++.++|.++.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~ 103 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLP 103 (176)
T ss_dssp C----CEEEEEEEEESCSCC
T ss_pred CCCCCCcEEEEEEEEHHHcc
Confidence 99999999999999999875
No 24
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=1e-19 Score=121.45 Aligned_cols=95 Identities=23% Similarity=0.419 Sum_probs=74.9
Q ss_pred EEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEE-eCC--CccEEEEEEEe
Q psy12820 58 VKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTV-HNP--EMALLRFVCQD 133 (156)
Q Consensus 58 ~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v-~~~--~~~~l~~~V~d 133 (156)
..|.|+|++|++|+..+ .+.+||||++.+.+.+.+.. +++|++++++ .||+|||+|.|.+ ... ....|.|+|||
T Consensus 18 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~-~~kT~v~~~t-~nP~wne~f~f~~~~~~~~~~~~l~~~V~d 95 (129)
T 2bwq_A 18 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKN-KRRTKTVKKT-LEPKWNQTFIYSPVHRREFRERMLEITLWD 95 (129)
T ss_dssp TEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGG-EEECCCCSSB-SSCEEEEEEEECSCCGGGGGGCEEEEEEEE
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCc-ceecccccCC-CCCccccEEEEccCCHHHhcCCeEEEEEEE
Confidence 57999999999999876 67789999999875332233 8899999988 9999999999984 322 23589999999
Q ss_pred cCCCCC--CceEEEEEEECCCCC
Q psy12820 134 EDMFGD--SNFIGQATYPVYTNR 154 (156)
Q Consensus 134 ~~~~~~--~~~iG~~~i~l~~l~ 154 (156)
++..++ +++||++.+++.++.
T Consensus 96 ~d~~~~~~~~~lG~~~i~l~~l~ 118 (129)
T 2bwq_A 96 QARVREEESEFLGEILIELETAL 118 (129)
T ss_dssp C-------CEEEEEEEEEGGGCC
T ss_pred CCcCcCcCCceeEEEEEEccccC
Confidence 999886 899999999998864
No 25
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.2e-19 Score=122.98 Aligned_cols=95 Identities=26% Similarity=0.432 Sum_probs=79.3
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCC---CccEEEEEEE
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNP---EMALLRFVCQ 132 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~---~~~~l~~~V~ 132 (156)
...|.|+|++|++|+..+ .+.+||||++.+.+. +.. ++||++++++ +||+|||+|.|.+... ....|.|+||
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~--~~~-~~kT~v~~~t-~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 100 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPD--KKH-KLETKVKRKN-LNPHWNETFLFEGFPYEKVVQRILYLQVL 100 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESC--CSS-EEECCCCTTC-SSCCCCEEEEECSCCHHHHTTSEEEEEEE
T ss_pred CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECC--CCc-cEeCceEcCC-CCCccccEEEECccCHHHcccCEEEEEEE
Confidence 457999999999999876 678999999998642 233 8899999887 9999999999984321 2358999999
Q ss_pred ecCCCCCCceEEEEEEECCCCCC
Q psy12820 133 DEDMFGDSNFIGQATYPVYTNRF 155 (156)
Q Consensus 133 d~~~~~~~~~iG~~~i~l~~l~~ 155 (156)
|++..+++++||++.+++.++..
T Consensus 101 d~d~~~~~~~iG~~~i~l~~l~~ 123 (141)
T 2d8k_A 101 DYDRFSRNDPIGEVSIPLNKVDL 123 (141)
T ss_dssp ECCSSSSCEEEEEEEEETTTSCT
T ss_pred ECCCCCCCcEEEEEEEEhhhhcC
Confidence 99999899999999999998753
No 26
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.80 E-value=1.5e-19 Score=124.94 Aligned_cols=95 Identities=21% Similarity=0.311 Sum_probs=79.6
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEEe
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQD 133 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~d 133 (156)
...|.|+|++|++|+..+ .+.+||||++.+.+.+. ...+++|++++++ +||+|||+|.|.+..+++ ..|.|+|||
T Consensus 24 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~-~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~l~i~V~d 101 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGK-RLKKKKTTIKKNT-LNPYYNESFSFEVPFEQIQKVQVVVTVLD 101 (159)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTE-EEEEEECCCCCSC-SSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCc-eeceeeCceecCC-CCCcccceEEEEcCHHHhCCcEEEEEEEE
Confidence 347999999999999876 67899999999864321 1237899999987 999999999999876543 479999999
Q ss_pred cCCCCCCceEEEEEEECCCC
Q psy12820 134 EDMFGDSNFIGQATYPVYTN 153 (156)
Q Consensus 134 ~~~~~~~~~iG~~~i~l~~l 153 (156)
++..+++++||++.+++.++
T Consensus 102 ~d~~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 102 YDKIGKNDAIGKVFVGYNST 121 (159)
T ss_dssp CCSSSCCEEEEEEEEETTCC
T ss_pred CCCCCCCceEEEEEECCCCC
Confidence 99999999999999999864
No 27
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=1.1e-19 Score=123.28 Aligned_cols=95 Identities=22% Similarity=0.408 Sum_probs=78.0
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEEe
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQD 133 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~d 133 (156)
...|.|+|++|++|+..+ .+ +||||++.+.+.+.... +++|++++++ +||+|||+|.|.+...++ ..|.|+|||
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~-~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~i~V~d 99 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSG-RRKTHVSKKT-LNPVFDQSFDFSVSLPEVQRRTLDVAVKN 99 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSS-CEECCCCCSC-SSCEEEEEEEECCCHHHHHHCEEEEEEEE
T ss_pred CCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCC-cccCCccCCC-CCCCcCceEEEEecHHHhCcCEEEEEEEE
Confidence 357999999999999876 56 99999999875332223 8899999988 999999999998764433 389999999
Q ss_pred cCCCCC--CceEEEEEEECCCCC
Q psy12820 134 EDMFGD--SNFIGQATYPVYTNR 154 (156)
Q Consensus 134 ~~~~~~--~~~iG~~~i~l~~l~ 154 (156)
++.+++ +++||++.+++.++.
T Consensus 100 ~d~~~~~~~~~iG~~~i~l~~~~ 122 (142)
T 2dmg_A 100 SGGFLSKDKGLLGKVLVALASEE 122 (142)
T ss_dssp CCCSSCCSCCCCEEEEEECCCST
T ss_pred CCCccccCCcEEEEEEEeccccc
Confidence 998763 579999999998864
No 28
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.80 E-value=2.2e-19 Score=120.94 Aligned_cols=91 Identities=21% Similarity=0.334 Sum_probs=78.7
Q ss_pred eeEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEEec
Q psy12820 56 TRVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDE 134 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~ 134 (156)
....|+|+|++|++|+..+ .+.+||||++++.+ . +.+|+++++++.||+|||+|.|.+.. ....|.|+|||+
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-----~-~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~ 80 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-----Q-DQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDK 80 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS-----C-EEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCS
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECC-----c-cceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEEC
Confidence 4578999999999999876 67899999998742 2 67999998333999999999999986 456899999999
Q ss_pred CCCCCCceEEEEEEECCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTN 153 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l 153 (156)
+..+++++||++.+++.++
T Consensus 81 ~~~~~d~~lG~~~i~l~~l 99 (136)
T 1wfj_A 81 DVGTEDDAVGEATIPLEPV 99 (136)
T ss_dssp SSCTTTCCSEEEEEESHHH
T ss_pred CCCCCCceEEEEEEEHHHh
Confidence 9999999999999999876
No 29
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.80 E-value=4e-19 Score=121.34 Aligned_cols=91 Identities=31% Similarity=0.461 Sum_probs=79.7
Q ss_pred eeEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEEec
Q psy12820 56 TRVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDE 134 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~ 134 (156)
....|.|+|++|++|+..+ .+.+||||++.+. .. +++|++++++ +||.|||+|.|.+..++ ..|.|+|||+
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~-----~~-~~kT~~~~~t-~nP~Wne~f~f~v~~~~-~~l~~~v~d~ 86 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVG-----KT-KKRTKTIYGN-LNPVWEENFHFECHNSS-DRIKVRVLDE 86 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-----TE-EEECCCCCSC-SSCEEEEEEEEEECSTT-CEEEEEEEEC
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC-----CE-EEECCccCCC-CCCCcccEEEEEecCCC-CEEEEEEEEC
Confidence 3578999999999999876 6789999999982 23 7899999988 99999999999998764 6899999999
Q ss_pred CCC-----------CCCceEEEEEEECCCCC
Q psy12820 135 DMF-----------GDSNFIGQATYPVYTNR 154 (156)
Q Consensus 135 ~~~-----------~~~~~iG~~~i~l~~l~ 154 (156)
+.. +++++||++.++++++.
T Consensus 87 d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~ 117 (148)
T 3kwu_A 87 DDDIKSRVKQRFKRESDDFLGQTIIEVRTLS 117 (148)
T ss_dssp CCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC
T ss_pred CCCccccccccccCCCCccEEEEEEEHHHCc
Confidence 985 78899999999998873
No 30
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.80 E-value=6.9e-20 Score=123.65 Aligned_cols=91 Identities=14% Similarity=0.195 Sum_probs=76.1
Q ss_pred eeEEEEEEEeeeeecccCC-C-----------CCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCC
Q psy12820 56 TRVKVLLRVLAARHLTRSG-R-----------CTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPE 123 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~-~-----------~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~ 123 (156)
....|+|+|++|++|+..+ . +.+||||++.+. .....+|++++++ +||+|||+|.|.+..+
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~-----~~~~~~T~~~~~t-~nP~WnE~f~f~v~~~- 76 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD-----DSRIGQTATKQKT-NSPAWHDEFVTDVCNG- 76 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEET-----TEEEEECCCCSSC-SSCEEEEEEEEEEEEE-
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEEC-----CeEeeeeeEECCC-cCCccCCEEEEEecCC-
Confidence 3578999999999998764 2 238999999973 2225688888887 9999999999998764
Q ss_pred ccEEEEEEEecCCCCCCceEEEEEEECCCCC
Q psy12820 124 MALLRFVCQDEDMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 124 ~~~l~~~V~d~~~~~~~~~iG~~~i~l~~l~ 154 (156)
..|.|+|||++..+++++||++.+++.++.
T Consensus 77 -~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~ 106 (136)
T 1gmi_A 77 -RKIELAVFHDAPIGYDDFVANCTIQFEELL 106 (136)
T ss_dssp -CEEEEEEEECCSSSSCEEEEEEEEEHHHHT
T ss_pred -CEEEEEEEeCCCCCCCCEEEEEEEEHHHhc
Confidence 789999999999999999999999987764
No 31
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.80 E-value=6.2e-20 Score=123.31 Aligned_cols=92 Identities=27% Similarity=0.429 Sum_probs=80.2
Q ss_pred eeEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEEec
Q psy12820 56 TRVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDE 134 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~ 134 (156)
....|+|+|++|++|+..+ .+.+||||++.+.+ . +.+|++++++ +||.|||+|.|.+..+ ...|.|+|||+
T Consensus 11 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-----~-~~kT~~~~~t-~nP~wne~f~f~~~~~-~~~l~i~V~d~ 82 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLAADFSGKSDPFCLLELGN-----D-RLQTHTVYKN-LNPEWNKVFTFPIKDI-HDVLEVTVFDE 82 (133)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT-----E-EEECCCCSSC-SSCCCCEEEEEEESCT-TCEEEEEEEEE
T ss_pred CceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC-----E-EEEeeeecCC-CCCccccEEEEEecCC-CCEEEEEEEEC
Confidence 4578999999999999876 67899999999843 2 7899999987 9999999999999864 36899999999
Q ss_pred CCCCCCceEEEEEEECCCCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTNRF 155 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l~~ 155 (156)
+..+++++||++.+++.++..
T Consensus 83 d~~~~~~~lG~~~i~l~~l~~ 103 (133)
T 2ep6_A 83 DGDKPPDFLGKVAIPLLSIRD 103 (133)
T ss_dssp ETTEEEEECCBCEEEGGGCCS
T ss_pred CCCCCCCeeEEEEEEHHHccC
Confidence 999889999999999988753
No 32
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=1.4e-19 Score=123.46 Aligned_cols=93 Identities=22% Similarity=0.336 Sum_probs=78.1
Q ss_pred EEEEEEEeeeeecccC-C-------CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEE
Q psy12820 58 VKVLLRVLAARHLTRS-G-------RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALL 127 (156)
Q Consensus 58 ~~L~v~v~~a~~L~~~-~-------~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l 127 (156)
..|.|+|++|++|+.. + .+.+||||++.+... +.. +++|++++++ +||+|||+|.|.+...++ ..|
T Consensus 26 ~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~--~~~-~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L 101 (147)
T 2enp_A 26 NHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPD--QKN-SKQTGVKRKT-QKPVFEERYTFEIPFLEAQRRTL 101 (147)
T ss_dssp TEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETC--CSS-CEECCCCCSC-SSCCCCBCCEECCCHHHHHHSEE
T ss_pred CEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeC--CCc-ceEeecccCC-CCCeEeeeEEEEeChHHhccCEE
Confidence 4799999999999974 2 247999999998742 223 7899999987 999999999998765443 389
Q ss_pred EEEEEecCCCCCCceEEEEEEECCCCC
Q psy12820 128 RFVCQDEDMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 128 ~~~V~d~~~~~~~~~iG~~~i~l~~l~ 154 (156)
.|+|||++.++++++||++.++|.++.
T Consensus 102 ~~~V~d~d~~~~~~~iG~~~i~l~~l~ 128 (147)
T 2enp_A 102 LLTVVDFDKFSRHCVIGKVSVPLCEVD 128 (147)
T ss_dssp EEEEECCSTTCCSCCCEEEEEETTTSC
T ss_pred EEEEEECCCCcCCcEEEEEEEechhcC
Confidence 999999999999999999999999874
No 33
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.80 E-value=4.3e-19 Score=120.08 Aligned_cols=93 Identities=15% Similarity=0.228 Sum_probs=77.3
Q ss_pred eEEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEEec
Q psy12820 57 RVKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQDE 134 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~d~ 134 (156)
...|+|+|++|+. ....+.+||||++.+... +...+++|++++++ +||+|||+|.|.+...++ ..|.|.|||+
T Consensus 25 ~~~L~V~v~~a~~--~d~~g~sDPyv~v~l~~~--~~~~~~kT~v~~~t-lnP~wnE~f~f~v~~~~l~~~~L~~~V~d~ 99 (138)
T 1wfm_A 25 KAELFVTRLEAVT--SNHDGGCDCYVQGSVANR--TGSVEAQTALKKRQ-LHTTWEEGLVLPLAEEELPTATLTLTLRTC 99 (138)
T ss_dssp TTEEEEEEEEEEC--CCCSSCCCEEEEEEEEET--TEEEEEECCCCCCC-SSEECSSCEEEECCTTSSTTCEEEEEEEEC
T ss_pred CCEEEEEEEEEEc--CCCCCCcceEEEEEEEcC--CCcccEecccCcCC-CCCcCCceEEEEecHHHcCCCEEEEEEEEC
Confidence 3579999999993 233678999999998642 12236899999988 999999999999876654 4899999999
Q ss_pred CCCCCCceEEEEEEECCCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l~ 154 (156)
|.++++++||++.++|.++.
T Consensus 100 d~~~~dd~lG~~~i~l~~l~ 119 (138)
T 1wfm_A 100 DRFSRHSVAGELRLGLDGTS 119 (138)
T ss_dssp CSSCTTSCSEEEEEESSSSS
T ss_pred CCCCCCcEEEEEEEEccccc
Confidence 99999999999999999874
No 34
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=3e-19 Score=125.37 Aligned_cols=89 Identities=20% Similarity=0.397 Sum_probs=75.8
Q ss_pred eeEEEEEEEeeeeecc-cCCCCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEEec
Q psy12820 56 TRVKVLLRVLAARHLT-RSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDE 134 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~-~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~ 134 (156)
...+|.|+|++|++|+ ..+.+.+||||+|.+.+ . ++||++++++ +||+|||+|.|.+. +...|.|+|||+
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~-----~-~~kT~v~~~t-lnP~Wne~f~f~v~--~~~~L~~~V~D~ 104 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG-----Q-SKKTEKCNNT-NSPKWKQPLTVIVT--PVSKLHFRVWSH 104 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT-----E-EEECCCCSSC-SSCEEEEEEEEEEC--TTCEEEEEEEEC
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECC-----E-EeEccccCCC-CCCeECCEEEEEeC--CCCEEEEEEEEC
Confidence 3568999999999998 54555699999999842 3 8899999987 99999999999885 367899999999
Q ss_pred CCCCCCceEEEEEEECCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTN 153 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l 153 (156)
+.++++++||++.+++.++
T Consensus 105 d~~~~dd~lG~~~i~l~~l 123 (173)
T 2nq3_A 105 QTLKSDVLLGTAALDIYET 123 (173)
T ss_dssp CSSSCCEEEEEEEEEHHHH
T ss_pred CCCCCCceEEEEEEEHHHh
Confidence 9999999999999998765
No 35
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=1.2e-19 Score=122.83 Aligned_cols=95 Identities=25% Similarity=0.461 Sum_probs=78.9
Q ss_pred EEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEE-EeCCCc--cEEEEEEEe
Q psy12820 58 VKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFT-VHNPEM--ALLRFVCQD 133 (156)
Q Consensus 58 ~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~-v~~~~~--~~l~~~V~d 133 (156)
..|.|+|++|++|+..+ .+.+||||++.+.+...... +++|++++++ +||+|||+|.|. +...++ ..|.|+|||
T Consensus 21 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~-~~kT~~~~~t-~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 98 (141)
T 1v27_A 21 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKN-KRRTKTVKKT-LEPKWNQTFIYSPVHRREFRERMLEITLWD 98 (141)
T ss_dssp TEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSS-CCBCCCCSSC-SSCCCCCCCEECSCCTTGGGTCEEEEEEEE
T ss_pred CEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCc-ceeCccccCC-CCCccccEEEEccCCHHHhcCCEEEEEEEE
Confidence 57999999999998876 67899999999865322233 7899999997 999999999998 443332 589999999
Q ss_pred cCCCCC--CceEEEEEEECCCCC
Q psy12820 134 EDMFGD--SNFIGQATYPVYTNR 154 (156)
Q Consensus 134 ~~~~~~--~~~iG~~~i~l~~l~ 154 (156)
++..++ +++||++.+++.++.
T Consensus 99 ~d~~~~~~~~~lG~~~i~l~~l~ 121 (141)
T 1v27_A 99 QARVREEESEFLGEILIELETAL 121 (141)
T ss_dssp BCSSSSCCBCCCEEEEEEGGGCC
T ss_pred CCCCcCCCCceEEEEEEEccccC
Confidence 999886 899999999998864
No 36
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.79 E-value=1.7e-19 Score=126.24 Aligned_cols=95 Identities=21% Similarity=0.298 Sum_probs=79.7
Q ss_pred eEEEEEEEeeeeecccCC--CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEE-e
Q psy12820 57 RVKVLLRVLAARHLTRSG--RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQ-D 133 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~--~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~-d 133 (156)
...|.|+|++|++|+..+ .+.+||||++.+.+... ...++||++++++ +||+|||+|.|.+.. +...|.|+|| |
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~-~~~~~kT~v~~~t-~nP~wne~f~f~v~~-~~~~L~~~V~~d 105 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGA-CIAKKKTRIARKT-LDPLYQQSLVFDESP-QGKVLQVIVWGD 105 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTE-EEEEEECCCCCSC-SSCEEEEEEECSSCC-TTEEEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCc-cccceeCccCCCC-CCCCCCcEEEEEecC-CCCEEEEEEEEc
Confidence 457999999999999876 47899999999875321 1137899999988 999999999999754 3478999999 9
Q ss_pred cCCCCCCceEEEEEEECCCCC
Q psy12820 134 EDMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 134 ~~~~~~~~~iG~~~i~l~~l~ 154 (156)
++..+++++||++.++++++.
T Consensus 106 ~d~~~~d~~iG~~~i~l~~l~ 126 (171)
T 2q3x_A 106 YGRMDHKCFMGVAQILLEELD 126 (171)
T ss_dssp CSTTCSSEEEEEEEECGGGSC
T ss_pred CCCCCCCCEEEEEEEEHHHcc
Confidence 999999999999999998875
No 37
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.77 E-value=8e-19 Score=117.92 Aligned_cols=86 Identities=15% Similarity=0.255 Sum_probs=70.5
Q ss_pred eEEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEEecCC
Q psy12820 57 RVKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDEDM 136 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~~~ 136 (156)
...|.|+|++|++++ ..+.+||||++. . . +.+|+++++++.||+|||+|.|.+..++ ..|.|+|||+|
T Consensus 4 ~~~L~V~V~~A~~l~--~~g~~DPYv~v~-~------~-~~kt~~~~~~t~nP~WnE~f~f~v~~~~-~~L~~~V~D~d- 71 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDG--AQEKFNTYVTLK-V------Q-NVKSTTIAVRGSQPSWEQDFMFEINRLD-LGLTVEVWNKG- 71 (131)
T ss_dssp CEEEEEEEEEEECSS--CGGGCEEEEEEE-E------T-TEEEECCCEESSSCEEEEEEEEEECCCS-SEEEEEEEECC-
T ss_pred ceEEEEEEEEeECCC--CCCCcCeEEEEE-e------c-CEEEeEecCCCCCceECCEEEEEEeCCC-CeEEEEEEECC-
Confidence 468999999999885 357889999998 1 1 4456666543499999999999998654 47999999999
Q ss_pred CCCCceEEEEEEECCCCC
Q psy12820 137 FGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 137 ~~~~~~iG~~~i~l~~l~ 154 (156)
.++|++||++.++|+++.
T Consensus 72 ~~~dd~iG~~~i~l~~l~ 89 (131)
T 2cjt_A 72 LIWDTMVGTVWIPLRTIR 89 (131)
T ss_dssp SSCEEEEEEEEEEGGGSC
T ss_pred CCCCCeEEEEEEEHHHhh
Confidence 888999999999998874
No 38
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=1.1e-19 Score=123.19 Aligned_cols=97 Identities=24% Similarity=0.403 Sum_probs=79.1
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCC--------CceEEeEEecCCCCCCeeCceEEEE-EeCC--Cc
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDT--------GLKLTTKTVSDNGFNPTWNESCEFT-VHNP--EM 124 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~--------~~~~kT~~~~~~~~nP~w~e~f~f~-v~~~--~~ 124 (156)
...|.|+|++|++|+..+ .+.+||||++.+.+..... ..++||++++++ +||+|||+|.|. +... ..
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t-~nP~wne~f~f~~v~~~~l~~ 95 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKS-LNPEWNQTVIYKSISMEQLMK 95 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHH-HSCEEEEEEEECSCCHHHHTT
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCC-CCCCCCCEEEECCcCHHHccC
Confidence 347999999999999876 6789999999986532110 125789998887 999999999997 5532 23
Q ss_pred cEEEEEEEecCCCCCCceEEEEEEECCCCC
Q psy12820 125 ALLRFVCQDEDMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 125 ~~l~~~V~d~~~~~~~~~iG~~~i~l~~l~ 154 (156)
..|.|+|||++..+++++||++.++++++.
T Consensus 96 ~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~ 125 (142)
T 1rh8_A 96 KTLEVTVWDYDRFSSNDFLGEVLIDLSSTS 125 (142)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEETTSCG
T ss_pred CEEEEEEEECCCCCCCceEEEEEEeccccc
Confidence 589999999999999999999999999874
No 39
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=1.1e-17 Score=125.21 Aligned_cols=94 Identities=28% Similarity=0.417 Sum_probs=80.4
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEEe
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQD 133 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~d 133 (156)
...|.|+|++|++|+..+ .+.+||||++.+.+. +.. +++|++++++ +||+|||+|.|.+...+. ..|.|+|||
T Consensus 18 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~--~~~-~~~T~~~~~~-~nP~wne~f~f~v~~~~~~~~~l~~~V~d 93 (284)
T 2r83_A 18 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD--KKK-KFETKVHRKT-LNPVFNEQFTFKVPYSELAGKTLVMAVYD 93 (284)
T ss_dssp TTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETC--TTS-CEECCCCCSC-SSCEEEEEEEECCCGGGCTTCEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcC--CCc-eEeCCcccCC-CCCeeCceEEEEechHHhCcCEEEEEEEE
Confidence 357999999999999876 678999999998642 223 7889999988 999999999999876543 589999999
Q ss_pred cCCCCCCceEEEEEEECCCCC
Q psy12820 134 EDMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 134 ~~~~~~~~~iG~~~i~l~~l~ 154 (156)
++.++++++||++.+++.++.
T Consensus 94 ~d~~~~~~~lG~~~i~l~~l~ 114 (284)
T 2r83_A 94 FDRFSKHDIIGEFKVPMNTVD 114 (284)
T ss_dssp CCSSSCCCEEEEEEEEGGGCC
T ss_pred CCCCCCCceeEEEEEcchhcc
Confidence 999999999999999998874
No 40
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.72 E-value=1.3e-17 Score=116.38 Aligned_cols=86 Identities=15% Similarity=0.252 Sum_probs=70.5
Q ss_pred eEEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEEecCC
Q psy12820 57 RVKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDEDM 136 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~~~ 136 (156)
...|.|+|++|++++ ..+.+||||++. . . +.||+++++++.||+|||+|.|.+...+ ..|.|+|||+|
T Consensus 13 ~~~L~V~V~~A~~l~--~~g~~DPYV~v~-~------~-~~kt~~~~~~t~nP~WnE~f~f~v~~~~-~~L~~~V~D~d- 80 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG--AQEKFNTYVTLK-V------Q-NVESTTIAVRGSQPSWEQDFMFEINRLD-LGLTVEVWNKG- 80 (167)
T ss_dssp CCEEEEEEEEEECSS--CGGGCEEEEEEE-E------T-TEEEECCCEESSSCEEEEEEEEECCCTT-SEEEEEEEECC-
T ss_pred eEEEEEEEEEEECCC--CCCCCCeEEEEE-e------c-ceEEEEecCCCCCCCCCCEEEEEeeCCC-CEEEEEEEECC-
Confidence 358999999999884 357789999998 1 1 4567666543499999999999988654 47999999999
Q ss_pred CCCCceEEEEEEECCCCC
Q psy12820 137 FGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 137 ~~~~~~iG~~~i~l~~l~ 154 (156)
.++|++||++.++|.++.
T Consensus 81 ~~~dd~iG~~~i~L~~l~ 98 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTIR 98 (167)
T ss_dssp SSCCEEEEEEEEEGGGSC
T ss_pred CCCCceEEEEEEEHHHhc
Confidence 888999999999998874
No 41
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=3e-17 Score=122.93 Aligned_cols=95 Identities=21% Similarity=0.310 Sum_probs=79.8
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCcc--EEEEEEEe
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMA--LLRFVCQD 133 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~--~l~~~V~d 133 (156)
...|.|.|++|++|+..+ .+.+||||++.+.+.+. ...+++|++++++ +||+|||+|.|.+..+++. .|.|+|||
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~-~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~l~i~V~d 226 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGK-RLKKKKTTIKKNT-LNPYYNESFSFEVPFEQIQKVQVVVTVLD 226 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTE-EEEEEECCCCCSC-SSCEEEEEEEEECCTTTGGGEEEEEEEEE
T ss_pred CCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCc-EeeeeccceecCC-CCCEEceeEEEeCCHHHhCceEEEEEEEe
Confidence 347999999999998876 67899999999864321 1236789999888 9999999999998876653 79999999
Q ss_pred cCCCCCCceEEEEEEECCCC
Q psy12820 134 EDMFGDSNFIGQATYPVYTN 153 (156)
Q Consensus 134 ~~~~~~~~~iG~~~i~l~~l 153 (156)
++..+++++||++.++++++
T Consensus 227 ~d~~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 227 YDKIGKNDAIGKVFVGYNST 246 (284)
T ss_dssp CCSSSCCCEEEEEEEETTCC
T ss_pred CCCCCCCcEEEEEEECCCCC
Confidence 99999999999999999764
No 42
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.71 E-value=1.1e-17 Score=139.11 Aligned_cols=107 Identities=24% Similarity=0.391 Sum_probs=84.1
Q ss_pred CCCCCCCCCCCceeeEEEEEEEeeeeeccc---CC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEE
Q psy12820 43 SYDPYDPTSLVGVTRVKVLLRVLAARHLTR---SG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFT 118 (156)
Q Consensus 43 ~~~p~~~~~~~~~~~~~L~v~v~~a~~L~~---~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~ 118 (156)
.|||.....++......|+|+|++|++|+. .+ .+.+||||++++.+. ...++||++++++ +||+|||+|.|.
T Consensus 3 ~fdP~~~~~ve~~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~---~~~k~kTkvik~t-lNPvWNEtF~F~ 78 (749)
T 1cjy_A 3 FIDPYQHIIVEHQYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTT---PDSRKRTRHFNND-INPVWNETFEFI 78 (749)
T ss_dssp ----------CCCCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTS---TTCCEECCCCTTC-SSCEEEEEEEEE
T ss_pred CCCCCccccccCCCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecC---CCCeEecceEcCC-CCCeeeeEEEEE
Confidence 366665544555567899999999999987 44 578999999998642 2238899999987 999999999999
Q ss_pred EeCCCccEEEEEEEecCCCCCCceEEEEEEECCCCC
Q psy12820 119 VHNPEMALLRFVCQDEDMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 119 v~~~~~~~l~~~V~d~~~~~~~~~iG~~~i~l~~l~ 154 (156)
+..+....|.|+|||+|..+ +++||++.+++.+|.
T Consensus 79 v~~~~~~~L~~~V~D~D~~~-ddfIG~v~I~L~~L~ 113 (749)
T 1cjy_A 79 LDPNQENVLEITLMDANYVM-DETLGTATFTVSSMK 113 (749)
T ss_dssp ECTTSCCBCEEEEEECCSSS-CEEEEEECCBSTTSC
T ss_pred ecCCCCCEEEEEEEECCCCC-CceeEEEEEEHHHcC
Confidence 99877789999999999998 999999999999875
No 43
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.70 E-value=1.5e-16 Score=128.57 Aligned_cols=117 Identities=18% Similarity=0.209 Sum_probs=90.5
Q ss_pred cccccCCceeEEecCCcccCCCCCCCCCCCCCceeeEEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEE
Q psy12820 22 AKFRMNGGCGYLLRPAFMFSESYDPYDPTSLVGVTRVKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKT 101 (156)
Q Consensus 22 ~~F~~ng~~GyvlKP~~l~~~~~~p~~~~~~~~~~~~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~ 101 (156)
+.-...+.|-.+.+|-.......=| .......|+|+|++|++|+....+.+||||+|.+.+ . +.||++
T Consensus 364 ~~~l~g~~C~C~C~~~~~t~~~~C~------~~~~~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~-----~-~~kTkv 431 (540)
T 3nsj_A 364 QHKSSHDSCQCECQDSKVTNQDCCP------RQRGLAHLVVSNFRAEHLWGDYTTATDAYLKVFFGG-----Q-EFRTGV 431 (540)
T ss_dssp EEECSSCTTCEEESCTTTBCGGGCB------SSTTEEEEEEEEEEEESCCCSSCSCCCEEEEEEETT-----E-EEECCC
T ss_pred CccCCCCceEeeCCCCCCccccccc------ccCcccEEEEEEEEccCCCcccCCCcCeEEEEEECC-----E-eeeeee
Confidence 4444556688888885333221111 112357899999999999883377899999999842 3 799999
Q ss_pred ecCCCCCCeeCceEEEEEe-CCCccEEEEEEEecCCCCCCceEEEEEEECC
Q psy12820 102 VSDNGFNPTWNESCEFTVH-NPEMALLRFVCQDEDMFGDSNFIGQATYPVY 151 (156)
Q Consensus 102 ~~~~~~nP~w~e~f~f~v~-~~~~~~l~~~V~d~~~~~~~~~iG~~~i~l~ 151 (156)
++++ +||+|||+|.|.+. .+....|+|+|||+|..++||+||++.++|.
T Consensus 432 ik~t-lNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~ 481 (540)
T 3nsj_A 432 VWNN-NNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSPH 481 (540)
T ss_dssp BCSC-SSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCEEEEEEEECCC
T ss_pred ecCC-CCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCCEEEEEEEEee
Confidence 9998 99999999999864 4456789999999999999999999999986
No 44
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.69 E-value=4.9e-17 Score=109.30 Aligned_cols=87 Identities=9% Similarity=0.143 Sum_probs=75.5
Q ss_pred eEEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEEec
Q psy12820 57 RVKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQDE 134 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~d~ 134 (156)
-+.|+|.|.+|.+|+ +..|||+++.+.+. +++|+++++++.||+|||.|+|++..+.. .+|.+.|+|+
T Consensus 20 ~msL~V~l~~a~~Lp----g~~Dp~akv~FRg~------k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~ 89 (144)
T 3l9b_A 20 HMALIVHLKTVSELR----GRADRIAKVTFRGQ------SFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNY 89 (144)
T ss_dssp CEEEEEEEEEEESCC----SCEEEEEEEEETTE------EEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEE
T ss_pred cEEEEEEEEEecCCC----CCCCCeEEEEEecc------ceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEEC
Confidence 467999999999998 57899999998542 89999998544999999999999885443 4999999999
Q ss_pred CCCCCCceEEEEEEECCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTN 153 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l 153 (156)
+.++++++||++.++|.++
T Consensus 90 ~~v~~nrlIG~~~i~Lq~l 108 (144)
T 3l9b_A 90 SKVFSNKLIGTFRMVLQKV 108 (144)
T ss_dssp CTTSCCEEEEEEEEESHHH
T ss_pred ccccCCCEEEEEEEEhHHh
Confidence 9999999999999998764
No 45
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.69 E-value=5.4e-17 Score=122.50 Aligned_cols=89 Identities=29% Similarity=0.461 Sum_probs=76.0
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCcc--EEEEEEEe
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMA--LLRFVCQD 133 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~--~l~~~V~d 133 (156)
...|.|+|++|++|+..+ .+.+||||++.+.. .+.. +++|++++++ +||+|||+|.|.+...++. .|.|+|||
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~--~~~~-~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~~~V~d 94 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSNGFSDPYVKIYLLP--DRKK-KFQTKVHRKT-LNPIFNETFQFSVPLAELAQRKLHFSVYD 94 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTTSCCCEEEEEECTT--STTS-CEECCCCCSC-SSCEEEEEEEEECCGGGGSSCCCEEEEEE
T ss_pred CCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEc--CCCe-eEeCCccCCC-CCCcEeeEEEEEecHHHhcCCEEEEEEEE
Confidence 357999999999999876 67899999999752 2233 7899999988 9999999999998765543 89999999
Q ss_pred cCCCCCCceEEEEEEE
Q psy12820 134 EDMFGDSNFIGQATYP 149 (156)
Q Consensus 134 ~~~~~~~~~iG~~~i~ 149 (156)
+|.++++++||++.++
T Consensus 95 ~d~~~~~~~iG~~~i~ 110 (296)
T 1dqv_A 95 FDRFSRHDLIGQVVLD 110 (296)
T ss_dssp CCSSSCCCEEEEEECC
T ss_pred cCCCCCCceEEEEEec
Confidence 9999999999999995
No 46
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.68 E-value=8.2e-17 Score=129.38 Aligned_cols=92 Identities=26% Similarity=0.528 Sum_probs=80.5
Q ss_pred eeEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCccEEEEEEEec
Q psy12820 56 TRVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDE 134 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~ 134 (156)
....|.|+|++|++|+..+ .+.+||||++.+. .. +++|++++++ +||+|||+|.|.+..+....|.|+|||+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~-----~~-~~~T~~~~~t-~nP~w~e~f~f~~~~~~~~~l~~~v~d~ 457 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMG-----SQ-SYTTRTIQDT-LNPKWNFNCQFFIKDLYQDVLCLTLFDR 457 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-----TE-EEECCCCSSC-SSCEEEEEEEEEESCTTTCEEEEEEEEC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEEC-----Ce-eccCCccCCC-CCCccCceEEEEecCCCCCEEEEEEEeC
Confidence 3468999999999998776 7789999999973 23 7899999988 9999999999999877777899999999
Q ss_pred CCCCCCceEEEEEEECCCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l~ 154 (156)
|..+++++||++.++++++.
T Consensus 458 d~~~~~d~lG~~~~~l~~l~ 477 (510)
T 3jzy_A 458 DQFSPDDFLGRTEIPVAKIR 477 (510)
T ss_dssp CSSSSCCEEEEEEEEHHHHH
T ss_pred CCCCCCCceEEEEEEHHHhc
Confidence 99999999999999987653
No 47
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.65 E-value=3.3e-17 Score=123.70 Aligned_cols=95 Identities=20% Similarity=0.272 Sum_probs=79.6
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEEe
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQD 133 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~d 133 (156)
...|+|.|++|++|+..+ .+.+||||++++...+ ....++||++++++ +||+|||+|.|.+..+++ ..|.|+|||
T Consensus 151 ~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~-~~~~~~kT~v~~~t-~nP~wne~f~f~v~~~~l~~~~L~i~V~d 228 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEG-RRLKKRKTSIKKNT-LNPTYNEALVFDVAPESVENVGLSIAVVD 228 (296)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTC-CTTSCEECCCCCSC-SSCEEEECCCCCCCSGGGGSCCCCCEEEE
T ss_pred cceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCC-cCccceecceecCC-CCCeECceEEEEcCHHHccCcEEEEEEEe
Confidence 357999999999998876 6778999999986422 22337899999988 999999999999876543 379999999
Q ss_pred cCCCCCCceEEEEEEECCCC
Q psy12820 134 EDMFGDSNFIGQATYPVYTN 153 (156)
Q Consensus 134 ~~~~~~~~~iG~~~i~l~~l 153 (156)
++..+++++||++.+++.++
T Consensus 229 ~d~~~~~~~iG~~~i~l~~~ 248 (296)
T 1dqv_A 229 YDCIGHNEVIGVCRVGPEAA 248 (296)
T ss_dssp CCSSSCCEEEEECCCSSCTT
T ss_pred CCCCCCCceEEEEEECCccC
Confidence 99999999999999998865
No 48
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.54 E-value=9.9e-15 Score=121.14 Aligned_cols=96 Identities=22% Similarity=0.421 Sum_probs=81.9
Q ss_pred eEEEEEEEeeeeecccCC-CCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc-cEEEEEEEec
Q psy12820 57 RVKVLLRVLAARHLTRSG-RCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM-ALLRFVCQDE 134 (156)
Q Consensus 57 ~~~L~v~v~~a~~L~~~~-~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~-~~l~~~V~d~ 134 (156)
...|.|+|++|++|+..+ .+.+||||++.+.+.+.... +++|++++++ +||+|||+|.|.+...+. ..|.|+|||+
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~-k~kT~v~~~t-lnP~wne~f~f~~~~~~~~~~L~v~v~d~ 248 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSES-KQKTKTIKSS-LNPEWNETFRFQLKESDKDRRLSVEIWDW 248 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCS-CEECCCCSSC-SSCEEEEEEEEECCSTTTTCEEEEEEEEC
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccc-cccccccccc-cCCCccceeeeecccCCccceeeeEEeec
Confidence 457899999999998876 77899999999876544344 8899999998 999999999999875544 3699999999
Q ss_pred CCCCCCceEEEEEEECCCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l~ 154 (156)
|..+++++||++.++++++.
T Consensus 249 d~~~~dd~iG~~~i~l~~l~ 268 (674)
T 3pfq_A 249 DLTSRNDFMGSLSFGISELQ 268 (674)
T ss_dssp CSSSCCEECCBCCCBTTHHH
T ss_pred ccccccccccccccchhhhc
Confidence 99999999999999988753
No 49
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.41 E-value=1.6e-14 Score=115.70 Aligned_cols=89 Identities=21% Similarity=0.245 Sum_probs=9.2
Q ss_pred eeEEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEEecCC--CCCCeeCceEEEEEeCCCccEEEEEEEe
Q psy12820 56 TRVKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDN--GFNPTWNESCEFTVHNPEMALLRFVCQD 133 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~--~~nP~w~e~f~f~v~~~~~~~l~~~V~d 133 (156)
....|+|+|++|++|+..+ ||||++.+.+ .. ..||++++++ |+||+|||+|.|.+... ...|.+.|||
T Consensus 9 ~~~~L~V~VieAk~L~~~d----dpYv~v~l~~----~~-~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d 78 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK----RYYCELCLDD----ML-YARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYR 78 (483)
T ss_dssp EEECC------------------------------------------------------CCEECC---------------
T ss_pred eccEEEEEEEEcCCcCCCC----CCeEEEEECC----eE-EeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEe
Confidence 4568999999999998765 8999998742 22 5688888765 58999999999986533 5789999999
Q ss_pred c-C---CCCCCceEEEEEEECCCCC
Q psy12820 134 E-D---MFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 134 ~-~---~~~~~~~iG~~~i~l~~l~ 154 (156)
+ | ..+++++||.+.++++++.
T Consensus 79 ~~d~~~~~~~d~~lG~v~i~l~~l~ 103 (483)
T 3bxj_A 79 DSDKKRKKDKAGYVGLVTVPVATLA 103 (483)
T ss_dssp -------------------------
T ss_pred cCCccccCCCCceEEEEEEEHHHhc
Confidence 4 4 3678899999999998875
No 50
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.53 E-value=2.6e-07 Score=61.20 Aligned_cols=88 Identities=9% Similarity=0.168 Sum_probs=59.9
Q ss_pred EEEEEEEeeeeecccC--CCCCCCCEEEEEEecCCCCCCceEEe-EEecCCCCCCeeCceEEEEEeCCCccEEEEEEEec
Q psy12820 58 VKVLLRVLAARHLTRS--GRCTTSPFVEVEVLGADYDTGLKLTT-KTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDE 134 (156)
Q Consensus 58 ~~L~v~v~~a~~L~~~--~~~~~dpyv~v~l~~~~~~~~~~~kT-~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~ 134 (156)
..|+|.+.+..--+.. .....||||.|.+...- .....+| .+.+++ ..|+|||+|.-.+.. ...|.+.|++.
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~--~te~gqtl~~KkkT-~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~ 84 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYV--ESENGQMYIQKKPT-MYPPWDSTFDAHINK--GRVMQIIVKGK 84 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEE--EETTEEEEEEEEEE-ECCCSSSEEEECCCS--SCEEEEEEECS
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeee--eccCceeecccCCC-CCccccceEeeeEEC--CeEEEEEEEcC
Confidence 3577777666543322 34568999999874210 0012455 455556 899999988876664 46899999965
Q ss_pred CCCCCCceEEEEEEECCCCC
Q psy12820 135 DMFGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 135 ~~~~~~~~iG~~~i~l~~l~ 154 (156)
.. +|++.+++++.+|.
T Consensus 85 a~----~fVAn~tV~~edL~ 100 (138)
T 2enj_A 85 NV----DLISETTVELYSLA 100 (138)
T ss_dssp SC----SCCEEEEEESHHHH
T ss_pred CC----CeeeEEEEEHHHHH
Confidence 43 89999999998764
No 51
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.52 E-value=3.8e-07 Score=59.64 Aligned_cols=87 Identities=13% Similarity=0.101 Sum_probs=58.1
Q ss_pred EEEEEEeeeeecccC-CCCCCCCEEEEEEecCCCCCCceEEe-EEecCCCCCCeeCceEEEEEeCCCccEEEEEEEecCC
Q psy12820 59 KVLLRVLAARHLTRS-GRCTTSPFVEVEVLGADYDTGLKLTT-KTVSDNGFNPTWNESCEFTVHNPEMALLRFVCQDEDM 136 (156)
Q Consensus 59 ~L~v~v~~a~~L~~~-~~~~~dpyv~v~l~~~~~~~~~~~kT-~~~~~~~~nP~w~e~f~f~v~~~~~~~l~~~V~d~~~ 136 (156)
-|+|.+.++.--+.. .....|||+.|.+...-. .. ..+| .+.+++ ..|+|||+|.-.+.. ...|.+.|++...
T Consensus 7 flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~-~e-~g~t~~~K~kT-~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~ 81 (126)
T 1yrk_A 7 FLRIAFNSYELGSLQAEDEANQPFCAVKMKEALS-TE-RGKTLVQKKPT-MYPEWKSTFDAHIYE--GRVIQIVLMRAAE 81 (126)
T ss_dssp EEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEE-ET-TEEEEECCSCC-BCCCTTCEEEEECCT--TCEEEEEEEEETT
T ss_pred cEEeeeccccccccCCccccCCceEEEEeeeeEE-cc-cceeecccCCC-CCcCccceEEeeeeC--CEEEEEEEEcCCC
Confidence 577777665532211 234689999998742100 00 2244 455555 999999998877665 4688999997653
Q ss_pred CCCCceEEEEEEECCCCC
Q psy12820 137 FGDSNFIGQATYPVYTNR 154 (156)
Q Consensus 137 ~~~~~~iG~~~i~l~~l~ 154 (156)
+|++.+++++.+|.
T Consensus 82 ----~fvAn~tV~~edL~ 95 (126)
T 1yrk_A 82 ----EPVSEVTVGVSVLA 95 (126)
T ss_dssp ----EEEEEEEEEHHHHH
T ss_pred ----CeeeEEEEEHHHHH
Confidence 89999999987764
No 52
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=96.92 E-value=0.0071 Score=52.60 Aligned_cols=93 Identities=15% Similarity=0.167 Sum_probs=62.6
Q ss_pred EEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEe---CCCccEEEEEEEec
Q psy12820 58 VKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVH---NPEMALLRFVCQDE 134 (156)
Q Consensus 58 ~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~---~~~~~~l~~~V~d~ 134 (156)
..+.|+|+++.++........+-||++.+......-....+|+.+. +.+|.|||-+.|++. .|..+.|.|+||+.
T Consensus 355 ~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~--~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 355 SALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP--CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp SEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC--TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC--CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 4789999999887644444567899999875332222234454333 257889999999986 46667999999986
Q ss_pred CCC----CCCceEEEEEEECCC
Q psy12820 135 DMF----GDSNFIGQATYPVYT 152 (156)
Q Consensus 135 ~~~----~~~~~iG~~~i~l~~ 152 (156)
... ..+..||++.++|-+
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd 454 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFD 454 (1091)
T ss_dssp CCCC-------CCEEEEEESBC
T ss_pred cCccCcccccceeEEeeeeeEc
Confidence 432 123479999999854
No 53
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=96.85 E-value=0.0076 Score=51.85 Aligned_cols=92 Identities=15% Similarity=0.184 Sum_probs=60.6
Q ss_pred EEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEe---CCCccEEEEEEEec
Q psy12820 58 VKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVH---NPEMALLRFVCQDE 134 (156)
Q Consensus 58 ~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~---~~~~~~l~~~V~d~ 134 (156)
..+.|+|.++.++... +..+-||++.+...+..-.....|+.+.-. .+|.|||-+.|++. .|..+.|.|+||+.
T Consensus 217 ~~f~i~i~~~~~~~~~--~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~-~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 293 (940)
T 2wxf_A 217 QPFSIELIEGRKVNAD--ERMKLVVQAGLFHGNEMLCKTVSSSEVNVC-SEPVWKQRLEFDISVCDLPRMARLCFALYAV 293 (940)
T ss_dssp SEEEEEEEEEECCCC-----CEEEEEEEEEETTEESSCCEECCCEESC-SSCEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred CceEEEEEEecccCCC--CCceEEEEEEEEECCEEccCceecccccCC-CCcccceEEEcccccccCCcccEEEEEEEEe
Confidence 4789999999988643 345678988876432111113344444434 68999999999876 45567999999985
Q ss_pred CCC--C----------CCceEEEEEEECCC
Q psy12820 135 DMF--G----------DSNFIGQATYPVYT 152 (156)
Q Consensus 135 ~~~--~----------~~~~iG~~~i~l~~ 152 (156)
... + ....||++.+++-+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd 323 (940)
T 2wxf_A 294 VEKAKKARSTKKKSKKADCPIAWANLMLFD 323 (940)
T ss_dssp C----------------CEEEEEEEEESBC
T ss_pred cCCccCccccccccccccceEEEEeeeEEC
Confidence 321 1 23489999998854
No 54
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=96.75 E-value=0.062 Score=38.41 Aligned_cols=56 Identities=13% Similarity=0.206 Sum_probs=41.8
Q ss_pred ceEEeEEecCCCCCCeeCceEEEEEeCCCc--cEEEEEEEecCCC----CCCceEEEEEEECC
Q psy12820 95 LKLTTKTVSDNGFNPTWNESCEFTVHNPEM--ALLRFVCQDEDMF----GDSNFIGQATYPVY 151 (156)
Q Consensus 95 ~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~--~~l~~~V~d~~~~----~~~~~iG~~~i~l~ 151 (156)
..++|.+...+ -+|.|+|++.+.+..... +-|.|++++.... ..+..+|-+.+||-
T Consensus 77 se~~S~V~YHn-k~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQV-KQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTC-SSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcC-CCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 46788888877 899999999998885444 5888998864321 22357999999974
No 55
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=96.16 E-value=0.025 Score=48.80 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=56.5
Q ss_pred EEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEe---CCCccEEEEEEEec
Q psy12820 58 VKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVH---NPEMALLRFVCQDE 134 (156)
Q Consensus 58 ~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~---~~~~~~l~~~V~d~ 134 (156)
..+.|+|+++...........+-||++.+...+ ......+|+.+.-. .+|.|||-+.|++. .|..+.|.|+||+.
T Consensus 218 ~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~-~~l~~~~t~~~~~~-~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQ-QVLCQRRTSPKPFT-EEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp SEEEEEEEEEECSSCCTTSCEEEEEEEEEEETT-EEEEEEECCCEECC-SEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred CceEEEEeecccccccCCCCceEEEEEEEEECC-EEcccceeeccccC-CCcccceeEEeccccccCCcccEEEEEEEec
Confidence 357788887754211122345678888876321 11112344444333 57999999999876 45567999999974
Q ss_pred CCC----------------CCCceEEEEEEECCC
Q psy12820 135 DMF----------------GDSNFIGQATYPVYT 152 (156)
Q Consensus 135 ~~~----------------~~~~~iG~~~i~l~~ 152 (156)
... ++...||++.++|-+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd 329 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLID 329 (961)
T ss_dssp EC--------------------CEEEEEEEESBC
T ss_pred ccCccccccccccccccccccceeEEEEeeeeec
Confidence 321 123489999998754
No 56
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=95.34 E-value=0.014 Score=50.98 Aligned_cols=92 Identities=16% Similarity=0.154 Sum_probs=57.3
Q ss_pred EEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeC---CCccEEEEEEEec
Q psy12820 58 VKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHN---PEMALLRFVCQDE 134 (156)
Q Consensus 58 ~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~---~~~~~l~~~V~d~ 134 (156)
..+.|+|.++.++... +..+-||++.+...+..-.....|+.+.-. .+|.|||-+.|++.. |..+.|.|+||+.
T Consensus 353 ~~f~i~i~~~~~~~~~--~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~-~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE--ETVKVHVRAGLFHGTELLCKTVVSSEISGK-NDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp SEEEEEECCCCCCCCC--SSCCCCCBCCEEETTEESSCCCBCCCCCSS-SCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred CCEEEEEEEeccCCCC--CCceEEEEEEEEECCEEccCceecccccCC-CCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 4788999999887643 345778887765322111112334444333 689999999998774 4456999999985
Q ss_pred CCC----------------------CCCceEEEEEEECCC
Q psy12820 135 DMF----------------------GDSNFIGQATYPVYT 152 (156)
Q Consensus 135 ~~~----------------------~~~~~iG~~~i~l~~ 152 (156)
... +....||++.+++-+
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd 469 (1092)
T 2y3a_A 430 LDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFD 469 (1092)
T ss_dssp ------------------------------CCEEEEESBC
T ss_pred cCccccccccccccccccccccccccccceeEEEeeeeEC
Confidence 211 112378999988754
No 57
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=50.13 E-value=14 Score=24.80 Aligned_cols=90 Identities=13% Similarity=0.176 Sum_probs=57.1
Q ss_pred eeEEEEEEEeeeeecccC-C-CCCCCC--EEEEEEecCCCCCCceEEeEEecCCCCCCeeCceEEEEEeCCCc-------
Q psy12820 56 TRVKVLLRVLAARHLTRS-G-RCTTSP--FVEVEVLGADYDTGLKLTTKTVSDNGFNPTWNESCEFTVHNPEM------- 124 (156)
Q Consensus 56 ~~~~L~v~v~~a~~L~~~-~-~~~~dp--yv~v~l~~~~~~~~~~~kT~~~~~~~~nP~w~e~f~f~v~~~~~------- 124 (156)
..+.+.|.|.+++--+.. . .+..+| |+.+.+. |-. .+.|.+++ |.+|.+|-+-.|.+...+.
T Consensus 16 gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~----dfE-tq~Tpv~~--G~~p~y~fts~Y~V~~d~~fl~yL~~ 88 (156)
T 2yrb_A 16 GENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFY----DFE-LQTTPVVR--GLHPEYNFTSQYLVHVNDLFLQYIQK 88 (156)
T ss_dssp SCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECST----TCC-CEECCCEE--SSSCCCCEEEEEEECCSHHHHHHHHH
T ss_pred CCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEe----ceE-eeeccccc--CCCCCcceEEEEEEEeCHHHHHHHhc
Confidence 346788888877632221 0 112345 5555543 233 55666666 4799999998888864332
Q ss_pred cEEEEEEEecCCCCCCceEEEEEEECCCC
Q psy12820 125 ALLRFVCQDEDMFGDSNFIGQATYPVYTN 153 (156)
Q Consensus 125 ~~l~~~V~d~~~~~~~~~iG~~~i~l~~l 153 (156)
..+.++++.... +.-+.||.+.|++..+
T Consensus 89 ~~l~lELhqa~g-~~~~tla~~~I~l~~l 116 (156)
T 2yrb_A 89 NTITLEVHQAYS-TEYETIAACQLKFHEI 116 (156)
T ss_dssp CCEEEEEEEECS-SCEEEEEEEEECCSHH
T ss_pred CCEEEEEEEeeC-CCceEEEEEEEEhHHh
Confidence 267888887542 2346899999998765
No 58
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=48.87 E-value=56 Score=21.70 Aligned_cols=96 Identities=13% Similarity=0.004 Sum_probs=51.2
Q ss_pred EEEEEEEeeeeecccCCCCCCCCEEEEEEecCCCC-CCceEEeEEe-cCCCCCCeeCceEEEEEe---CCCccEEEEEEE
Q psy12820 58 VKVLLRVLAARHLTRSGRCTTSPFVEVEVLGADYD-TGLKLTTKTV-SDNGFNPTWNESCEFTVH---NPEMALLRFVCQ 132 (156)
Q Consensus 58 ~~L~v~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~-~~~~~kT~~~-~~~~~nP~w~e~f~f~v~---~~~~~~l~~~V~ 132 (156)
..|+|.|-+- ++... ....+||+.|++....+. -...+.|.+. ...+-.=.|+.+.+++.. .++.+.+.|++.
T Consensus 14 t~l~v~Ie~i-glkda-~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aivfElk 91 (152)
T 2qzq_A 14 TLLTLTIEKI-GLKDA-GQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIFFEFK 91 (152)
T ss_dssp CEEEEEEEEE-ECTTG-GGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEEEEEE
T ss_pred eEEEEEEEEE-EeCCH-HHccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEEEEEE
Confidence 3466655543 44322 345799999999754321 1123444332 111123345555554432 344556777777
Q ss_pred ecCCCC-CCceEEEEEEECCCCCC
Q psy12820 133 DEDMFG-DSNFIGQATYPVYTNRF 155 (156)
Q Consensus 133 d~~~~~-~~~~iG~~~i~l~~l~~ 155 (156)
++..-. +-...+++.+++++|+.
T Consensus 92 H~k~kkkk~S~kCw~f~~~d~i~~ 115 (152)
T 2qzq_A 92 HYKPKKRFTSTKCFAFMEMDEIKP 115 (152)
T ss_dssp EEETTTTEEEEEEEEEEEGGGCCS
T ss_pred EecccceeeeeeeEEEEEhhhccc
Confidence 764322 22367888888887753
No 59
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=25.90 E-value=24 Score=22.52 Aligned_cols=13 Identities=31% Similarity=0.641 Sum_probs=10.3
Q ss_pred cCCceeEEecCCc
Q psy12820 26 MNGGCGYLLRPAF 38 (156)
Q Consensus 26 ~ng~~GyvlKP~~ 38 (156)
..|..+|+.||..
T Consensus 107 ~~Ga~~yl~KP~~ 119 (134)
T 3to5_A 107 QAGVNGYIVKPFT 119 (134)
T ss_dssp HTTCCEEEESSCC
T ss_pred HCCCCEEEECCCC
Confidence 3578999999953
No 60
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=24.55 E-value=25 Score=21.54 Aligned_cols=12 Identities=33% Similarity=0.611 Sum_probs=9.8
Q ss_pred CCceeEEecCCc
Q psy12820 27 NGGCGYLLRPAF 38 (156)
Q Consensus 27 ng~~GyvlKP~~ 38 (156)
.|..||+.||..
T Consensus 102 ~ga~~~l~KP~~ 113 (133)
T 2r25_B 102 SGMNGFLSKPIK 113 (133)
T ss_dssp TTCSEEEESSCC
T ss_pred cCCCEEEeCCCC
Confidence 577899999954
No 61
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=23.84 E-value=26 Score=20.98 Aligned_cols=13 Identities=23% Similarity=0.327 Sum_probs=10.5
Q ss_pred cCCceeEEecCCc
Q psy12820 26 MNGGCGYLLRPAF 38 (156)
Q Consensus 26 ~ng~~GyvlKP~~ 38 (156)
..|..+|+.||..
T Consensus 93 ~~ga~~~l~KP~~ 105 (120)
T 3f6p_A 93 EIGADDYVTKPFS 105 (120)
T ss_dssp HTTCCEEEEESCC
T ss_pred hCCcceeEcCCCC
Confidence 4578999999954
No 62
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=22.89 E-value=31 Score=20.88 Aligned_cols=12 Identities=25% Similarity=0.551 Sum_probs=9.7
Q ss_pred CCceeEEecCCc
Q psy12820 27 NGGCGYLLRPAF 38 (156)
Q Consensus 27 ng~~GyvlKP~~ 38 (156)
.|..||+.||..
T Consensus 102 ~g~~~~l~KP~~ 113 (129)
T 3h1g_A 102 AGVNNYIVKPFT 113 (129)
T ss_dssp HTCCEEEESCCC
T ss_pred cCccEEEeCCCC
Confidence 467899999954
No 63
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=22.71 E-value=35 Score=20.57 Aligned_cols=12 Identities=25% Similarity=0.434 Sum_probs=9.9
Q ss_pred CCceeEEecCCc
Q psy12820 27 NGGCGYLLRPAF 38 (156)
Q Consensus 27 ng~~GyvlKP~~ 38 (156)
.|..||+.||..
T Consensus 98 ~ga~~~l~KP~~ 109 (130)
T 1dz3_A 98 LGASYFILKPFD 109 (130)
T ss_dssp TTCEEEEECSSC
T ss_pred cCCCEEEeCCCC
Confidence 578999999954
No 64
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=22.44 E-value=29 Score=20.79 Aligned_cols=12 Identities=17% Similarity=0.448 Sum_probs=9.8
Q ss_pred CCceeEEecCCc
Q psy12820 27 NGGCGYLLRPAF 38 (156)
Q Consensus 27 ng~~GyvlKP~~ 38 (156)
.|..||+.||..
T Consensus 96 ~ga~~~l~Kp~~ 107 (126)
T 1dbw_A 96 AGAVDFIEKPFE 107 (126)
T ss_dssp TTCSEEEESSCC
T ss_pred hCHHHheeCCCC
Confidence 577899999954
No 65
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=21.66 E-value=33 Score=20.89 Aligned_cols=13 Identities=38% Similarity=0.401 Sum_probs=10.2
Q ss_pred cCCceeEEecCCc
Q psy12820 26 MNGGCGYLLRPAF 38 (156)
Q Consensus 26 ~ng~~GyvlKP~~ 38 (156)
..|..||+.||..
T Consensus 103 ~~ga~~~l~KP~~ 115 (136)
T 1dcf_A 103 SFGLDGVLLKPVS 115 (136)
T ss_dssp HTTCCEEEESSCC
T ss_pred HcCCCeEEECCCC
Confidence 3577899999953
No 66
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=21.46 E-value=19 Score=22.76 Aligned_cols=12 Identities=17% Similarity=0.263 Sum_probs=9.5
Q ss_pred CCceeEEecCCc
Q psy12820 27 NGGCGYLLRPAF 38 (156)
Q Consensus 27 ng~~GyvlKP~~ 38 (156)
-|..||+.||..
T Consensus 97 ~g~~~yl~KP~~ 108 (123)
T 2lpm_A 97 YSNIPLLTKPFL 108 (123)
T ss_dssp SCSCSCBCSSSS
T ss_pred CCCCcEEECCCC
Confidence 367899999954
No 67
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=21.08 E-value=33 Score=20.15 Aligned_cols=12 Identities=25% Similarity=0.404 Sum_probs=9.4
Q ss_pred CCceeEEecCCc
Q psy12820 27 NGGCGYLLRPAF 38 (156)
Q Consensus 27 ng~~GyvlKP~~ 38 (156)
.|..||+.||..
T Consensus 93 ~g~~~~l~Kp~~ 104 (120)
T 2a9o_A 93 LGADDYVTKPFS 104 (120)
T ss_dssp HTCSEEEESSCC
T ss_pred CCHhheEeCCCC
Confidence 467899999953
No 68
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=20.96 E-value=33 Score=20.22 Aligned_cols=13 Identities=23% Similarity=0.475 Sum_probs=10.0
Q ss_pred cCCceeEEecCCc
Q psy12820 26 MNGGCGYLLRPAF 38 (156)
Q Consensus 26 ~ng~~GyvlKP~~ 38 (156)
..|..||+.||..
T Consensus 92 ~~g~~~~l~kp~~ 104 (121)
T 2pl1_A 92 SAGADDYVTKPFH 104 (121)
T ss_dssp HTTCSEEEESSCC
T ss_pred HcCccceEECCCC
Confidence 3577899999953
No 69
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=20.82 E-value=33 Score=20.56 Aligned_cols=13 Identities=15% Similarity=0.107 Sum_probs=10.2
Q ss_pred cCCceeEEecCCc
Q psy12820 26 MNGGCGYLLRPAF 38 (156)
Q Consensus 26 ~ng~~GyvlKP~~ 38 (156)
..|..+|+.||..
T Consensus 96 ~~Ga~~~l~KP~~ 108 (122)
T 3gl9_A 96 SLGARKVMRKPFS 108 (122)
T ss_dssp HTTCSEEEESSCC
T ss_pred hcChhhhccCCCC
Confidence 3577899999954
No 70
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=20.66 E-value=34 Score=20.30 Aligned_cols=12 Identities=25% Similarity=0.429 Sum_probs=9.4
Q ss_pred CCceeEEecCCc
Q psy12820 27 NGGCGYLLRPAF 38 (156)
Q Consensus 27 ng~~GyvlKP~~ 38 (156)
.|..||+.||..
T Consensus 95 ~g~~~~l~KP~~ 106 (123)
T 1xhf_A 95 IGADDYITKPFN 106 (123)
T ss_dssp HTCSEEEESSCC
T ss_pred cCcceEEeCCCC
Confidence 367899999953
No 71
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=20.54 E-value=34 Score=20.24 Aligned_cols=12 Identities=25% Similarity=0.426 Sum_probs=9.5
Q ss_pred CCceeEEecCCc
Q psy12820 27 NGGCGYLLRPAF 38 (156)
Q Consensus 27 ng~~GyvlKP~~ 38 (156)
.|..||+.||..
T Consensus 94 ~ga~~~l~Kp~~ 105 (122)
T 1zgz_A 94 MGADDYVTKPLE 105 (122)
T ss_dssp HTCSEEEESSCC
T ss_pred hCHHHHccCCCC
Confidence 467899999954
No 72
>1koe_A Endostatin; angiogenesis inhibitor, collagen XVIII, non-collageneous domain, heparin-binding domain; 1.50A {Mus musculus} SCOP: d.169.1.5 PDB: 1dy0_A 1dy1_A 1bnl_A
Probab=20.26 E-value=32 Score=23.36 Aligned_cols=17 Identities=18% Similarity=0.575 Sum_probs=11.7
Q ss_pred CCCeeCceEEEEEeCCC
Q psy12820 107 FNPTWNESCEFTVHNPE 123 (156)
Q Consensus 107 ~nP~w~e~f~f~v~~~~ 123 (156)
.+|.|.+++.+.-..++
T Consensus 104 ~d~~wpqK~vW~GS~~~ 120 (172)
T 1koe_A 104 RHPAWPQKSVWHGSDPS 120 (172)
T ss_dssp TCTTSSSCEEECCBCTT
T ss_pred CCCCCccceeeeCCCCC
Confidence 36888888877655444
Done!