BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12822
(82 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3OHM|B Chain B, Crystal Structure Of Activated G Alpha Q Bound To Its
Effector Phospholipase C Beta 3
Length = 885
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 5 QFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRP 64
Q SR+YPKG R+DSSNY P WNVG Q++ALNFQT D AMQ+N F NG GYLL+P
Sbjct: 642 QLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLKP 701
Query: 65 AFMF--SESYDPY 75
FM +S+DP+
Sbjct: 702 EFMRRPDKSFDPF 714
>pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length
Human Plcbeta3
pdb|4GNK|D Chain D, Crystal Structure Of Galphaq In Complex With Full-length
Human Plcbeta3
Length = 1235
Score = 90.5 bits (223), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 5 QFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRP 64
Q SR+YPKG R+DSSNY P WNVG Q++ALNFQT D AMQ+N F NG GYLL+P
Sbjct: 644 QLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLKP 703
Query: 65 AFMF--SESYDPY 75
FM +S+DP+
Sbjct: 704 EFMRRPDKSFDPF 716
>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta 1
pdb|1QAS|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta 1
pdb|1QAT|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta Complex With Samarium (Iii) Chloride
pdb|1QAT|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta Complex With Samarium (Iii) Chloride
Length = 622
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 46/62 (74%)
Query: 6 FSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPA 65
SR+YP G R DSSNY+PV +WN G Q++ALNFQTP M V F+ NGGCGY+L+PA
Sbjct: 413 LSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPA 472
Query: 66 FM 67
F+
Sbjct: 473 FL 474
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJG|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJH|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJH|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJI|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJI|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJW|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJW|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJX|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJX|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJY|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJY|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJZ|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|1DJZ|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|2ISD|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
pdb|2ISD|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Length = 624
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 46/62 (74%)
Query: 6 FSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPA 65
SR+YP G R DSSNY+PV +WN G Q++ALNFQTP M V F+ NGGCGY+L+PA
Sbjct: 415 LSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPA 474
Query: 66 FM 67
F+
Sbjct: 475 FL 476
>pdb|3QR0|A Chain A, Crystal Structure Of S. Officinalis Plc21
Length = 816
Score = 83.6 bits (205), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 5 QFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRP 64
Q +R+YPKG R+DSSNY P WN G Q++ALNFQ D AM VN F NG GYLL+P
Sbjct: 567 QITRIYPKGTRVDSSNYVPQIYWNAGCQLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKP 626
Query: 65 AFM--FSESYDPY 75
FM + +DP+
Sbjct: 627 EFMRKLDKRFDPF 639
>pdb|3QR1|A Chain A, Crystal Structure Of L. Pealei Plc21
pdb|3QR1|D Chain D, Crystal Structure Of L. Pealei Plc21
Length = 813
Score = 83.6 bits (205), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 5 QFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRP 64
Q +R+YPKG R+DSSNY P WN G Q++ALNFQ D AM VN F NG GYLL+P
Sbjct: 567 QLTRIYPKGTRVDSSNYVPQIYWNAGCQLVALNFQCFDVAMCVNLGVFEYNGCSGYLLKP 626
Query: 65 AFM--FSESYDPY 75
FM + +DP+
Sbjct: 627 EFMRKLDKRFDPF 639
>pdb|2FJU|B Chain B, Activated Rac1 Bound To Its Effector Phospholipase C Beta
2
pdb|2ZKM|X Chain X, Crystal Structure Of Phospholipase C Beta 2
Length = 799
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 43/63 (68%)
Query: 5 QFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRP 64
Q SR+YPKG R+DSSNY P WN G QM+ALNFQT D MQ N A F NG GYLL+
Sbjct: 595 QMSRIYPKGTRMDSSNYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKH 654
Query: 65 AFM 67
FM
Sbjct: 655 EFM 657
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,749,526
Number of Sequences: 62578
Number of extensions: 93884
Number of successful extensions: 116
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109
Number of HSP's gapped (non-prelim): 7
length of query: 82
length of database: 14,973,337
effective HSP length: 51
effective length of query: 31
effective length of database: 11,781,859
effective search space: 365237629
effective search space used: 365237629
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)