Query psy12822
Match_columns 82
No_of_seqs 115 out of 513
Neff 5.1
Searched_HMMs 46136
Date Fri Aug 16 20:43:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12822.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12822hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00387 PI-PLC-Y: Phosphatidy 100.0 2.7E-44 5.9E-49 242.0 -0.0 67 2-68 52-118 (118)
2 smart00149 PLCYc Phospholipase 100.0 1.6E-43 3.5E-48 237.8 3.2 66 2-67 50-115 (115)
3 PLN02230 phosphoinositide phos 100.0 1.7E-40 3.6E-45 269.0 3.5 76 2-77 384-464 (598)
4 PLN02222 phosphoinositide phos 100.0 4.2E-40 9.1E-45 266.0 3.6 76 2-77 367-447 (581)
5 PLN02228 Phosphoinositide phos 100.0 4.5E-39 9.7E-44 259.5 3.6 76 2-77 349-426 (567)
6 PLN02223 phosphoinositide phos 100.0 3.2E-38 7E-43 253.3 4.1 75 2-76 324-403 (537)
7 PLN02952 phosphoinositide phos 100.0 3.9E-38 8.5E-43 255.3 3.6 76 2-77 385-465 (599)
8 KOG1264|consensus 100.0 2.4E-37 5.2E-42 257.6 3.7 77 2-78 981-1057(1267)
9 KOG0169|consensus 100.0 3.3E-37 7.2E-42 253.4 2.8 73 2-74 533-607 (746)
10 KOG1265|consensus 100.0 4.3E-36 9.3E-41 250.9 1.9 77 2-78 617-695 (1189)
11 cd08625 PI-PLCc_beta3 Catalyti 100.0 1E-31 2.2E-36 200.4 3.1 54 2-55 205-258 (258)
12 cd08624 PI-PLCc_beta2 Catalyti 100.0 4.9E-31 1.1E-35 197.1 3.0 54 2-55 208-261 (261)
13 cd08628 PI-PLCc_gamma2 Catalyt 100.0 3.5E-31 7.6E-36 197.3 1.4 54 2-55 201-254 (254)
14 cd08597 PI-PLCc_PRIP_metazoa C 100.0 8.1E-31 1.7E-35 195.8 2.3 54 2-55 207-260 (260)
15 cd08592 PI-PLCc_gamma Catalyti 100.0 1E-30 2.2E-35 192.4 2.6 54 2-55 176-229 (229)
16 cd08595 PI-PLCc_zeta Catalytic 100.0 9.7E-31 2.1E-35 195.2 2.4 54 2-55 204-257 (257)
17 cd08630 PI-PLCc_delta3 Catalyt 100.0 1.2E-30 2.5E-35 194.8 2.6 54 2-55 205-258 (258)
18 cd08633 PI-PLCc_eta2 Catalytic 100.0 1.1E-30 2.4E-35 194.7 2.3 54 2-55 201-254 (254)
19 cd08623 PI-PLCc_beta1 Catalyti 100.0 1.5E-30 3.3E-35 194.2 3.0 54 2-55 205-258 (258)
20 cd08629 PI-PLCc_delta1 Catalyt 100.0 1.5E-30 3.2E-35 194.3 2.4 54 2-55 205-258 (258)
21 cd08596 PI-PLCc_epsilon Cataly 100.0 2E-30 4.3E-35 193.3 2.2 54 2-55 201-254 (254)
22 cd08594 PI-PLCc_eta Catalytic 100.0 2.5E-30 5.5E-35 190.2 2.7 54 2-55 174-227 (227)
23 cd08631 PI-PLCc_delta4 Catalyt 100.0 2.1E-30 4.5E-35 193.5 2.0 54 2-55 205-258 (258)
24 cd08593 PI-PLCc_delta Catalyti 100.0 2.4E-30 5.3E-35 192.9 2.0 54 2-55 204-257 (257)
25 cd08632 PI-PLCc_eta1 Catalytic 100.0 3E-30 6.6E-35 192.2 2.3 54 2-55 200-253 (253)
26 cd08626 PI-PLCc_beta4 Catalyti 100.0 4E-30 8.7E-35 191.9 2.3 54 2-55 204-257 (257)
27 cd08591 PI-PLCc_beta Catalytic 100.0 4.6E-30 9.9E-35 191.6 2.3 54 2-55 204-257 (257)
28 cd08558 PI-PLCc_eukaryota Cata 100.0 7.2E-30 1.6E-34 187.6 2.9 54 2-55 173-226 (226)
29 cd08599 PI-PLCc_plant Catalyti 100.0 6.8E-30 1.5E-34 187.9 2.6 54 2-55 175-228 (228)
30 cd08627 PI-PLCc_gamma1 Catalyt 100.0 1.1E-29 2.3E-34 187.2 3.3 53 2-54 176-228 (229)
31 cd08598 PI-PLC1c_yeast Catalyt 99.9 2.9E-29 6.3E-34 184.9 2.3 53 2-54 178-230 (231)
32 cd00137 PI-PLCc Catalytic doma 99.7 1.1E-18 2.5E-23 129.7 1.9 54 2-55 209-274 (274)
33 PF14321 DUF4382: Domain of un 48.8 11 0.00024 25.0 1.4 11 54-64 129-139 (139)
34 PF06485 DUF1092: Protein of u 45.3 9.2 0.0002 29.3 0.6 37 13-49 178-215 (270)
35 PF01308 Chlam_OMP: Chlamydia 33.1 19 0.00041 28.9 0.7 41 25-65 197-244 (389)
36 PF12620 DUF3778: Protein of u 32.6 21 0.00045 21.8 0.6 18 22-39 35-52 (61)
37 cd08904 START_STARD6-like Lipi 28.8 44 0.00095 24.1 1.9 21 45-65 137-158 (204)
38 KOG0658|consensus 28.5 16 0.00035 29.2 -0.4 30 5-34 186-217 (364)
39 PF00072 Response_reg: Respons 28.3 29 0.00062 20.5 0.8 13 54-66 91-103 (112)
40 smart00739 KOW KOW (Kyprides, 25.4 67 0.0014 15.0 1.7 22 41-64 4-25 (28)
41 PF10008 DUF2251: Uncharacteri 23.1 64 0.0014 21.3 1.7 16 46-61 10-25 (97)
42 PF04181 RPAP2_Rtr1: Rtr1/RPAP 21.2 34 0.00073 20.8 0.1 16 54-69 19-34 (79)
No 1
>PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=100.00 E-value=2.7e-44 Score=242.01 Aligned_cols=67 Identities=60% Similarity=1.171 Sum_probs=51.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeecCCeeeEecCCccc
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPAFMF 68 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~NG~cGYVlKP~~lr 68 (82)
|++||+||||+|+|+|||||||+++|++|||||||||||.|++|+||+|+|+.||+|||||||++||
T Consensus 52 ~~~~l~RvyP~~~R~~SsN~~P~~~W~~G~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~lR 118 (118)
T PF00387_consen 52 NKRHLVRVYPSGTRIDSSNFNPLPFWNCGCQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEYLR 118 (118)
T ss_dssp HHHSEEEEE--TT-TT-----THHHHTTT-SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred cccceEEecCCccccCCCCCChHHHhhccCccceeeccCCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence 6899999999999999999999999999999999999999999999999999999999999999997
No 2
>smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=1.6e-43 Score=237.75 Aligned_cols=66 Identities=67% Similarity=1.212 Sum_probs=64.8
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeecCCeeeEecCCcc
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPAFM 67 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~NG~cGYVlKP~~l 67 (82)
|++||+||||+|+|+|||||||+++|++|||||||||||.|++||||+|+|+.||+|||||||++|
T Consensus 50 n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVLKP~~l 115 (115)
T smart00149 50 NQRQLSRVYPKGTRVDSSNYNPQVFWNAGCQMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL 115 (115)
T ss_pred ccccceEECcCCCcCCCCCCCCHHHHcCCceEeEeecCCCChHHHHHhhHhhcCCCCCeEeCCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999999986
No 3
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=1.7e-40 Score=269.01 Aligned_cols=76 Identities=42% Similarity=0.832 Sum_probs=72.6
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeecCCeeeEecCCcccc-----CCCCCCC
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPAFMFS-----ESYDPYD 76 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~NG~cGYVlKP~~lr~-----~~f~p~~ 76 (82)
||+||+||||+|+|+|||||||+.+|++|||||||||||.|++||||+|||+.||+|||||||++||+ ..|+|.+
T Consensus 384 nk~~L~RIYPkG~RvdSSNynP~~~W~~GcQMVALN~Qt~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fdP~~ 463 (598)
T PLN02230 384 TQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKD 463 (598)
T ss_pred hhhhceeeCCCCCcCCCCCCCchhHhcCceEEeeecccCCChHHHhhcchhccCCCCCceECCHHhcCCCccccccCCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999997 2688876
Q ss_pred C
Q psy12822 77 P 77 (82)
Q Consensus 77 ~ 77 (82)
.
T Consensus 464 ~ 464 (598)
T PLN02230 464 N 464 (598)
T ss_pred C
Confidence 4
No 4
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=4.2e-40 Score=265.99 Aligned_cols=76 Identities=39% Similarity=0.823 Sum_probs=72.3
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeecCCeeeEecCCccccC-----CCCCCC
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPAFMFSE-----SYDPYD 76 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~NG~cGYVlKP~~lr~~-----~f~p~~ 76 (82)
||+||+||||+|+|+|||||||+.+|++|||||||||||.|++||||+|||+.||+|||||||++||+. .|+|..
T Consensus 367 n~~~L~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~ 446 (581)
T PLN02222 367 TQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKA 446 (581)
T ss_pred hhhhceeeCCCCCcCcCCCCCchhHhcCCcEEeeccccCCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999999999973 578875
Q ss_pred C
Q psy12822 77 P 77 (82)
Q Consensus 77 ~ 77 (82)
.
T Consensus 447 ~ 447 (581)
T PLN02222 447 T 447 (581)
T ss_pred C
Confidence 4
No 5
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=4.5e-39 Score=259.50 Aligned_cols=76 Identities=42% Similarity=0.845 Sum_probs=72.4
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeecCCeeeEecCCccccC--CCCCCCC
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPAFMFSE--SYDPYDP 77 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~NG~cGYVlKP~~lr~~--~f~p~~~ 77 (82)
||+||+||||+|+|+|||||||+.+|++|||||||||||.|++||||+|||+.||+|||||||++||+. .|+|+..
T Consensus 349 Nkr~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~QT~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~~~~f~p~~~ 426 (567)
T PLN02228 349 TQRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPRILLDEHTLFDPCKR 426 (567)
T ss_pred hhhhceeeCCCCCcCCCCCCCchhHhcCccEEeeecccCCChHHHhhcCchhhCCCCCceeCchhhcccccccCCccC
Confidence 799999999999999999999999999999999999999999999999999999999999999999973 6888754
No 6
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=3.2e-38 Score=253.26 Aligned_cols=75 Identities=29% Similarity=0.660 Sum_probs=71.0
Q ss_pred CccceeEEecCCcc-cCCCCCCcccccccccceeeeccCCCCccceecceeeeecCCeeeEecCCccccC----CCCCCC
Q psy12822 2 KLVQFSRVYPKGQR-IDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPAFMFSE----SYDPYD 76 (82)
Q Consensus 2 ~r~~l~RvyP~g~R-~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~NG~cGYVlKP~~lr~~----~f~p~~ 76 (82)
|+++|+||||+|+| +|||||||+.+|++|||||||||||.|++||||+|+|+.||+|||||||++||+. .|+|..
T Consensus 324 t~~~l~RiYPkG~R~~dSSNYnP~~~W~~GcQmVALN~QT~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~FdP~~ 403 (537)
T PLN02223 324 TQKKFLRTRPKKKNLLINAPYKPQRAWMHGAQLIALSRKDDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPSGVFYPTE 403 (537)
T ss_pred cccceEEECCCCCccccCCCCCChhhcccceeEeeeccCCCChhHHhhcchhccCCCCCceECChhhccCCcccccCCCC
Confidence 68999999999999 5999999999999999999999999999999999999999999999999999973 688853
No 7
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=3.9e-38 Score=255.26 Aligned_cols=76 Identities=46% Similarity=0.864 Sum_probs=71.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeecCCeeeEecCCcccc-----CCCCCCC
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPAFMFS-----ESYDPYD 76 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~NG~cGYVlKP~~lr~-----~~f~p~~ 76 (82)
||+||+||||+|+|+|||||||+.+|++|||||||||||.|++||||+|||+.||+|||||||++||+ ..|+|..
T Consensus 385 n~~~l~RiYP~g~R~dSsNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp~~ 464 (599)
T PLN02952 385 TQRNILRIYPKGTRITSSNYKPLIGWMHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKK 464 (599)
T ss_pred hhhhceeeCCCCCcCcCCCCCchhHhcCccEEeeecccCCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999986 3678865
Q ss_pred C
Q psy12822 77 P 77 (82)
Q Consensus 77 ~ 77 (82)
.
T Consensus 465 ~ 465 (599)
T PLN02952 465 K 465 (599)
T ss_pred C
Confidence 3
No 8
>KOG1264|consensus
Probab=100.00 E-value=2.4e-37 Score=257.63 Aligned_cols=77 Identities=64% Similarity=1.132 Sum_probs=75.4
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeecCCeeeEecCCccccCCCCCCCCC
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPAFMFSESYDPYDPE 78 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~NG~cGYVlKP~~lr~~~f~p~~~~ 78 (82)
||++|+||||+|.|+|||||||+++|+||||||||||||.|++||+|+|+|+.||.|||||||++||.+.|+|++++
T Consensus 981 nr~qlSRVYPkGqRldSsNy~P~pmWn~GsqmVALN~QTgDKpMQmNqa~F~~ngrcGYvLqPs~Mrte~fdP~n~e 1057 (1267)
T KOG1264|consen 981 NRKQLSRVYPKGQRLDSSNYDPFPMWNCGSQMVALNFQTGDKPMQMNQALFSLNGRCGYVLQPSSMRTEKFDPMNPE 1057 (1267)
T ss_pred ccccceeecCCCcccccCCCCCcccccccceeEEeeccCCCchhhhhHHHhhcCCceeeEecchhcccccCCCCChH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999873
No 9
>KOG0169|consensus
Probab=100.00 E-value=3.3e-37 Score=253.36 Aligned_cols=73 Identities=55% Similarity=1.108 Sum_probs=71.6
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeecCCeeeEecCCcccc--CCCCC
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPAFMFS--ESYDP 74 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~NG~cGYVlKP~~lr~--~~f~p 74 (82)
|+++|+||||+|+|+|||||||+.+|++||||||+||||+|+.||||+|||+.||+|||||||++|++ .+|+|
T Consensus 533 t~r~L~RvYP~~~R~dSSNynPq~~W~~G~QmVAlN~Qt~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~~~~F~P 607 (746)
T KOG0169|consen 533 TQRNLLRVYPKGLRVDSSNYNPQEFWNHGCQMVALNFQTPGRMLDLNQGMFRANGGCGYVLKPDFLLDSGSTFDP 607 (746)
T ss_pred hHhheeeecCCccccCCCCCChHHHHhcCceEEEEecCCCChhhhhhhhhhccCCCccceECcHHHcCCCCccCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999 78999
No 10
>KOG1265|consensus
Probab=100.00 E-value=4.3e-36 Score=250.87 Aligned_cols=77 Identities=56% Similarity=1.012 Sum_probs=74.5
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeecCCeeeEecCCcccc--CCCCCCCCC
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPAFMFS--ESYDPYDPE 78 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~NG~cGYVlKP~~lr~--~~f~p~~~~ 78 (82)
||++|+||||+|+|+|||||.|+.||++|||||||||||.|..||||.|+|..||+|||+|||++||. ..|+||...
T Consensus 617 NK~QlSRIYPKgtRvdSSNymPqifWnaGcQmVsLNfQT~dlaMQlN~g~FEyNG~sGYllKPdfmRrpDr~fdPFse~ 695 (1189)
T KOG1265|consen 617 NKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLAMQLNMGMFEYNGGSGYLLKPDFMRRPDRQFDPFSES 695 (1189)
T ss_pred hhHhhhccccCcccccccccchHHHHhccceEEEeeccCccHHHHhhhhheeecCCccceeChHHhhCCCcCcCCcccC
Confidence 79999999999999999999999999999999999999999999999999999999999999999987 689999864
No 11
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=99.97 E-value=1e-31 Score=200.36 Aligned_cols=54 Identities=61% Similarity=0.938 Sum_probs=52.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|||||||||+++|++|||||||||||.|++||||+|||+.|
T Consensus 205 N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~QT~D~~M~LN~G~F~~n 258 (258)
T cd08625 205 NKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLAMQLNMGVFEYN 258 (258)
T ss_pred hhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecCCCCcchhhhcccccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 12
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=99.96 E-value=4.9e-31 Score=197.12 Aligned_cols=54 Identities=61% Similarity=0.916 Sum_probs=52.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|||||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 208 N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~D~~M~LN~G~F~~n 261 (261)
T cd08624 208 NKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQTMDLPMQQNMALFEFN 261 (261)
T ss_pred chhheeeeCCCCCcccCcCCCchHHhcCCCeEEEecccCCChhhhhhcccccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 13
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=99.96 E-value=3.5e-31 Score=197.26 Aligned_cols=54 Identities=65% Similarity=1.026 Sum_probs=52.8
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|||||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 201 N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~n 254 (254)
T cd08628 201 NRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLNHALFSLN 254 (254)
T ss_pred hHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeeccCCChhhhhhhhhccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 14
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=99.96 E-value=8.1e-31 Score=195.77 Aligned_cols=54 Identities=50% Similarity=0.839 Sum_probs=52.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|||||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 207 n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~M~lN~g~F~~N 260 (260)
T cd08597 207 NKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQTPGLMMDLNTGKFLEN 260 (260)
T ss_pred hhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeecccCCChhhhhhcccccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 15
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=99.96 E-value=1e-30 Score=192.44 Aligned_cols=54 Identities=72% Similarity=1.180 Sum_probs=52.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||++|+||||+|+|+|||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 176 n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~N 229 (229)
T cd08592 176 NRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKPMQLNQALFMLN 229 (229)
T ss_pred hhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeeccCCChhHHhhcccccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 16
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=99.96 E-value=9.7e-31 Score=195.20 Aligned_cols=54 Identities=52% Similarity=0.842 Sum_probs=52.8
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
|++||+||||+|+|||||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 204 n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Qt~d~~M~LN~G~F~~N 257 (257)
T cd08595 204 TQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQTLGAPMDLQNGKFLDN 257 (257)
T ss_pred hhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEecccCCChhhhhhcCcccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 17
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=99.96 E-value=1.2e-30 Score=194.81 Aligned_cols=54 Identities=48% Similarity=0.902 Sum_probs=52.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|||||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 205 n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~N 258 (258)
T cd08630 205 NARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYEMDLNAGRFLVN 258 (258)
T ss_pred hhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEecccCCChhhhhhcccccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 18
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=99.96 E-value=1.1e-30 Score=194.70 Aligned_cols=54 Identities=54% Similarity=0.962 Sum_probs=52.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|+|||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 201 N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~lN~g~F~~N 254 (254)
T cd08633 201 NQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQLNRAKFSAN 254 (254)
T ss_pred hhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEecccCCCchhHhhcccccCC
Confidence 799999999999999999999999999999999999999999999999999976
No 19
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=99.96 E-value=1.5e-30 Score=194.24 Aligned_cols=54 Identities=56% Similarity=0.931 Sum_probs=52.8
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|+|||||||+++|++|||||||||||.|++||||+|||+.|
T Consensus 205 N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~~ 258 (258)
T cd08623 205 NKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLSMQINMGMYEYN 258 (258)
T ss_pred hhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecCCCCcchhhhcccccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 20
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=99.96 E-value=1.5e-30 Score=194.34 Aligned_cols=54 Identities=52% Similarity=0.859 Sum_probs=52.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|||||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 205 n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 258 (258)
T cd08629 205 NVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDN 258 (258)
T ss_pred chhccceeCCCCCCCCCCCCCchHHhcCCceEEEecccCCChhHHhhhchhcCC
Confidence 789999999999999999999999999999999999999999999999999976
No 21
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=99.96 E-value=2e-30 Score=193.30 Aligned_cols=54 Identities=48% Similarity=0.724 Sum_probs=52.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|||||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 201 n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 254 (254)
T cd08596 201 TRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQTDDLPMHLNAAMFEAN 254 (254)
T ss_pred hhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeecccCCChHHHhhhchhcCC
Confidence 789999999999999999999999999999999999999999999999999976
No 22
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=99.96 E-value=2.5e-30 Score=190.23 Aligned_cols=54 Identities=56% Similarity=0.967 Sum_probs=52.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||++|+||||+|+|+|||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 174 n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~g~F~~N 227 (227)
T cd08594 174 NQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQTEGRMLQLNRAKFRAN 227 (227)
T ss_pred cccccceeCCCCCcCcCCCCCchHHhcCCceEEEecccCCChhhHhhcccccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 23
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=99.96 E-value=2.1e-30 Score=193.54 Aligned_cols=54 Identities=57% Similarity=0.912 Sum_probs=52.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|+|||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 205 n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 258 (258)
T cd08631 205 NTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQTAGLEMDLNDGLFRQN 258 (258)
T ss_pred HHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeecccCCChhHHhhcchhcCC
Confidence 789999999999999999999999999999999999999999999999999976
No 24
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=99.96 E-value=2.4e-30 Score=192.92 Aligned_cols=54 Identities=56% Similarity=0.970 Sum_probs=52.8
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|||||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 204 n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Qt~D~~m~LN~G~F~~N 257 (257)
T cd08593 204 NKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQTPGEEMDLNDGLFRQN 257 (257)
T ss_pred hhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeecccCCChHHHhhhchhcCC
Confidence 789999999999999999999999999999999999999999999999999976
No 25
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=99.96 E-value=3e-30 Score=192.24 Aligned_cols=54 Identities=54% Similarity=0.983 Sum_probs=52.8
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||++|+||||+|+|+|||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 200 n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~LN~g~F~~n 253 (253)
T cd08632 200 NQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQSEGRMMQLNRAKFMVN 253 (253)
T ss_pred hhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhcccccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 26
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=99.96 E-value=4e-30 Score=191.90 Aligned_cols=54 Identities=59% Similarity=0.999 Sum_probs=52.8
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|||||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 204 n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~n 257 (257)
T cd08626 204 NKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLGMQLNQGKFEYN 257 (257)
T ss_pred hhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhhccccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 27
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=99.96 E-value=4.6e-30 Score=191.58 Aligned_cols=54 Identities=61% Similarity=1.008 Sum_probs=52.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
|++||+||||+|+|+|||||||+.+|++|||||||||||.|++||||+|||+.|
T Consensus 204 n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~lN~g~F~~N 257 (257)
T cd08591 204 NKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPDLPMQLNQGKFEYN 257 (257)
T ss_pred hhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCcCCChhHHhhcccccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 28
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=99.96 E-value=7.2e-30 Score=187.62 Aligned_cols=54 Identities=65% Similarity=1.093 Sum_probs=52.8
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|+|||||||+++|++|||||||||||.|++||||+|+|+.|
T Consensus 173 n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~g~F~~n 226 (226)
T cd08558 173 NKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQTPDLPMQLNQGKFEQN 226 (226)
T ss_pred cccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeecccCCChhhhhhcccccCC
Confidence 789999999999999999999999999999999999999999999999999965
No 29
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=99.95 E-value=6.8e-30 Score=187.90 Aligned_cols=54 Identities=48% Similarity=0.786 Sum_probs=52.9
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
||+||+||||+|+|+|||||||+++|++|||||||||||.|++||||+|+|+.|
T Consensus 175 n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 228 (228)
T cd08599 175 TQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQGYDRPLWLNRGKFRAN 228 (228)
T ss_pred hhccceeeccCCcccCCCCCCChHHhcCcceEeeeecCCCChhhhhhcccccCC
Confidence 789999999999999999999999999999999999999999999999999976
No 30
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=99.95 E-value=1.1e-29 Score=187.16 Aligned_cols=53 Identities=64% Similarity=1.113 Sum_probs=51.7
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeee
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRM 54 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ 54 (82)
||++|+||||+|+|+|||||||+.+|++|||||||||||.|++|+||+|||+.
T Consensus 176 n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Qt~d~~M~LN~G~F~~ 228 (229)
T cd08627 176 NRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQALFML 228 (229)
T ss_pred cccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeeccCCCcchhhhcCcccC
Confidence 78999999999999999999999999999999999999999999999999983
No 31
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=99.95 E-value=2.9e-29 Score=184.92 Aligned_cols=53 Identities=53% Similarity=0.872 Sum_probs=51.8
Q ss_pred CccceeEEecCCcccCCCCCCcccccccccceeeeccCCCCccceecceeeee
Q psy12822 2 KLVQFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRM 54 (82)
Q Consensus 2 ~r~~l~RvyP~g~R~~SsN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ 54 (82)
|++||+||||+|+|+|||||||+.+|++|||||||||||.|++||||+|||+.
T Consensus 178 n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~ 230 (231)
T cd08598 178 NRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQTYDLGMQLNEAMFAG 230 (231)
T ss_pred hhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEecccCCChhhhhhcccccC
Confidence 78999999999999999999999999999999999999999999999999984
No 32
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=99.72 E-value=1.1e-18 Score=129.69 Aligned_cols=54 Identities=43% Similarity=0.677 Sum_probs=51.9
Q ss_pred CccceeEEecCCcc---------cCCCCCCccccccc---ccceeeeccCCCCccceecceeeeec
Q psy12822 2 KLVQFSRVYPKGQR---------IDSSNYNPVPLWNV---GSQMLALNFQTPDKAMQVNHAKFRMN 55 (82)
Q Consensus 2 ~r~~l~RvyP~g~R---------~~SsN~~P~~~W~~---G~QmvAlN~Qt~d~~m~ln~~~F~~N 55 (82)
|+++|.|+||+|+| ++|+||+|+.+|++ |||||||||||.|++|+||+|+|+.|
T Consensus 209 n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~~~~g~qiValdfqt~~~~~~ln~~~f~~N 274 (274)
T cd00137 209 NKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNANPAGCGIVILDFQTMDLPMQQYMAVIEFN 274 (274)
T ss_pred CcceEEEEccCccCCCCcchhhHhhcCccChHHHhccccCCceEEEeeCcCCCccHHHHhhhhccC
Confidence 46899999999999 99999999999999 99999999999999999999999976
No 33
>PF14321 DUF4382: Domain of unknown function (DUF4382)
Probab=48.76 E-value=11 Score=25.05 Aligned_cols=11 Identities=45% Similarity=1.090 Sum_probs=9.3
Q ss_pred ecCCeeeEecC
Q psy12822 54 MNGGCGYLLRP 64 (82)
Q Consensus 54 ~NG~cGYVlKP 64 (82)
..|+-+|+|||
T Consensus 129 ~~g~~~y~LkP 139 (139)
T PF14321_consen 129 QTGNGGYILKP 139 (139)
T ss_pred eCCCCCEEECC
Confidence 45788999999
No 34
>PF06485 DUF1092: Protein of unknown function (DUF1092); InterPro: IPR009472 This family consists of several hypothetical proteins of unknown function all from photosynthetic organisms including plants and cyanobacteria.
Probab=45.34 E-value=9.2 Score=29.33 Aligned_cols=37 Identities=22% Similarity=0.392 Sum_probs=29.7
Q ss_pred CcccCCC-CCCcccccccccceeeeccCCCCccceecc
Q psy12822 13 GQRIDSS-NYNPVPLWNVGSQMLALNFQTPDKAMQVNH 49 (82)
Q Consensus 13 g~R~~Ss-N~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~ 49 (82)
|.+|.|+ --.|+..|..|.+.|+|++.+....+-|..
T Consensus 178 Gv~I~s~~Ral~LA~Wl~glEp~~L~~~~~~~~LiLEa 215 (270)
T PF06485_consen 178 GVVIFSGRRALPLAAWLSGLEPVSLNYDPGEPGLILEA 215 (270)
T ss_pred eEEEecCcchhHHHHHhccCceEEEEEecCCceEEEec
Confidence 5667676 888999999999999999998766444443
No 35
>PF01308 Chlam_OMP: Chlamydia major outer membrane protein; InterPro: IPR000604 The major outer membrane protein of Chlamydia contains four symmetrically spaced variable domains (VDs I to IV). This protein maintains the structural rigidity of the outer membrane and facilitates porin formation, permitting diffusion of solutes through the intracellular reticulate body membrane. It is believed to play a role in pathogenesis and possibly adhesion. Along with the lipopolysaccharide, the major out membrane protein (MOMP) makes up the surface of the elementary body cell. Disulphide bond interactions within and between MOMP molecules and other components form high molecular weight oligomers. The MOMP is the protein used to determine the different serotypes.; GO: 0005198 structural molecule activity, 0015288 porin activity, 0009279 cell outer membrane
Probab=33.08 E-value=19 Score=28.90 Aligned_cols=41 Identities=27% Similarity=0.491 Sum_probs=32.4
Q ss_pred cccccccceeeeccCCC-------CccceecceeeeecCCeeeEecCC
Q psy12822 25 PLWNVGSQMLALNFQTP-------DKAMQVNHAKFRMNGGCGYLLRPA 65 (82)
Q Consensus 25 ~~W~~G~QmvAlN~Qt~-------d~~m~ln~~~F~~NG~cGYVlKP~ 65 (82)
..|.|||--+...||=. .....-|.+-|..+..-|||-+.-
T Consensus 197 aLWecGcatLGa~FqYaqSkP~Ve~lnv~~n~aqfti~kp~gy~g~~~ 244 (389)
T PF01308_consen 197 ALWECGCATLGAEFQYAQSKPKVEELNVLCNAAQFTIHKPKGYVGQEF 244 (389)
T ss_pred HHHHcCcccccccceecccCCCeeeEEEeccHHHeEecCCCcccCCcc
Confidence 47999999999999832 334556778999999999998753
No 36
>PF12620 DUF3778: Protein of unknown function (DUF3778); InterPro: IPR022256 This domain family is found in eukaryotes, and is typically between 48 and 61 amino acids in length. There is a conserved LRF sequence motif.
Probab=32.56 E-value=21 Score=21.75 Aligned_cols=18 Identities=39% Similarity=0.920 Sum_probs=15.1
Q ss_pred CcccccccccceeeeccC
Q psy12822 22 NPVPLWNVGSQMLALNFQ 39 (82)
Q Consensus 22 ~P~~~W~~G~QmvAlN~Q 39 (82)
-|+.+|..|+|.|-|-|-
T Consensus 35 p~~q~~~~gl~~~lLRfn 52 (61)
T PF12620_consen 35 PPVQFWSAGLQLVLLRFN 52 (61)
T ss_pred CCchhhhccceeeeeEEC
Confidence 378999999999988765
No 37
>cd08904 START_STARD6-like Lipid-binding START domain of mammalian STARD6 and related proteins. This subgroup includes the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD6 and related domains. It belongs to the START domain family, and in turn to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. STARD6 is expressed in male germ cells of normal rats, and in the steroidogenic Leydig cells of perinatal hypothyroid testes. It may play a pivotal role in the steroidogenesis as well as in the spermatogenesis of normal rats. STARD6 has also been detected in the rat nervous system, and may participate in neurosteroid synthesis.
Probab=28.83 E-value=44 Score=24.09 Aligned_cols=21 Identities=29% Similarity=0.542 Sum_probs=16.4
Q ss_pred ceecceeee-ecCCeeeEecCC
Q psy12822 45 MQVNHAKFR-MNGGCGYLLRPA 65 (82)
Q Consensus 45 m~ln~~~F~-~NG~cGYVlKP~ 65 (82)
+-.+.+..| .|+.||||++|.
T Consensus 137 ~Pp~~g~VRa~n~~~G~~i~pl 158 (204)
T cd08904 137 CPPSSNYIRGYNHPCGYVCSPL 158 (204)
T ss_pred CCCCCCcEEEeeeccEEEEEEC
Confidence 445567776 889999999994
No 38
>KOG0658|consensus
Probab=28.51 E-value=16 Score=29.18 Aligned_cols=30 Identities=23% Similarity=0.545 Sum_probs=23.2
Q ss_pred ceeEEecCCc-ccCCCCCCc-cccccccccee
Q psy12822 5 QFSRVYPKGQ-RIDSSNYNP-VPLWNVGSQML 34 (82)
Q Consensus 5 ~l~RvyP~g~-R~~SsN~~P-~~~W~~G~Qmv 34 (82)
+.+|.|-+.- -+++.+|.- +.-|++||-|+
T Consensus 186 icSRyYRaPELifga~~Yt~~IDiWSaGCV~a 217 (364)
T KOG0658|consen 186 ICSRYYRAPELIFGATEYTTSIDIWSAGCVMA 217 (364)
T ss_pred EEeccccCHHHHcCccccCceeEEhhhhHHHH
Confidence 5678885544 468999976 88999999774
No 39
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=28.27 E-value=29 Score=20.52 Aligned_cols=13 Identities=31% Similarity=0.434 Sum_probs=10.5
Q ss_pred ecCCeeeEecCCc
Q psy12822 54 MNGGCGYLLRPAF 66 (82)
Q Consensus 54 ~NG~cGYVlKP~~ 66 (82)
.-|-+|||.||..
T Consensus 91 ~~g~~~~l~kp~~ 103 (112)
T PF00072_consen 91 RAGADDYLSKPFS 103 (112)
T ss_dssp HTTESEEEESSSS
T ss_pred HCCCCEEEECCCC
Confidence 4588999999954
No 40
>smart00739 KOW KOW (Kyprides, Ouzounis, Woese) motif. Motif in ribosomal proteins, NusG, Spt5p, KIN17 and T54.
Probab=25.36 E-value=67 Score=14.97 Aligned_cols=22 Identities=23% Similarity=0.400 Sum_probs=15.9
Q ss_pred CCccceecceeeeecCCeeeEecC
Q psy12822 41 PDKAMQVNHAKFRMNGGCGYLLRP 64 (82)
Q Consensus 41 ~d~~m~ln~~~F~~NG~cGYVlKP 64 (82)
.+....+..|.|. |..|.|++=
T Consensus 4 ~G~~V~I~~G~~~--g~~g~i~~i 25 (28)
T smart00739 4 VGDTVRVIAGPFK--GKVGKVLEV 25 (28)
T ss_pred CCCEEEEeECCCC--CcEEEEEEE
Confidence 3555667778888 788888763
No 41
>PF10008 DUF2251: Uncharacterized protein conserved in bacteria (DUF2251); InterPro: IPR014449 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=23.14 E-value=64 Score=21.32 Aligned_cols=16 Identities=25% Similarity=0.453 Sum_probs=13.2
Q ss_pred eecceeeeecCCeeeE
Q psy12822 46 QVNHAKFRMNGGCGYL 61 (82)
Q Consensus 46 ~ln~~~F~~NG~cGYV 61 (82)
.-..++|+.+|..||.
T Consensus 10 ~~~~vVFEDdGeTGYF 25 (97)
T PF10008_consen 10 GPYAVVFEDDGETGYF 25 (97)
T ss_pred CCEEEEEEeCCCcEEE
Confidence 3457899999999996
No 42
>PF04181 RPAP2_Rtr1: Rtr1/RPAP2 family; InterPro: IPR007308 This entry represents a domain found in PAP2 (RNAP II associated polypeptide) protein and the yeast Rtr1 proteins. Its function is not known however it is thought to be a zinc finger.
Probab=21.17 E-value=34 Score=20.82 Aligned_cols=16 Identities=38% Similarity=0.503 Sum_probs=11.1
Q ss_pred ecCCeeeEecCCcccc
Q psy12822 54 MNGGCGYLLRPAFMFS 69 (82)
Q Consensus 54 ~NG~cGYVlKP~~lr~ 69 (82)
.+|.|||.|=+..+..
T Consensus 19 ~~~~CGYplC~~~~~~ 34 (79)
T PF04181_consen 19 INGLCGYPLCSNPPPK 34 (79)
T ss_pred hCCCCCCccCCCCccc
Confidence 3689999976555543
Done!