RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy12822
         (82 letters)



>d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 349

 Score =  115 bits (288), Expect = 2e-33
 Identities = 39/63 (61%), Positives = 43/63 (68%)

Query: 5   QFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRP 64
           Q SR+YPKG R+DSSNY P   WN G QM+ALNFQT D  MQ N A F  NG  GYLL+ 
Sbjct: 284 QMSRIYPKGTRMDSSNYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKH 343

Query: 65  AFM 67
            FM
Sbjct: 344 EFM 346


>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1)
           {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 327

 Score =  107 bits (268), Expect = 1e-30
 Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)

Query: 5   QFSRVYPKGQRIDSSNYNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRP 64
             SR+YP G R DSSNY+PV +WN G Q++ALNFQTP   M V    F+ NGGCGY+L+P
Sbjct: 248 CLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKP 307

Query: 65  AFMFSESYDPYDPENSYP 82
           AF+   +   ++      
Sbjct: 308 AFLRDPN-TTFNSRALTQ 324


>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 267

 Score = 25.2 bits (54), Expect = 0.93
 Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 21  YNPVPLWNVGSQMLALNFQTPDKAMQVNHAKFRMNGGCGYLLRPAF-MFSESYDPYDPEN 79
               P+    S   A    T D ++ V         GCG LLRP    F E+ DP   E 
Sbjct: 140 NYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEE 199

Query: 80  SY 81
             
Sbjct: 200 VD 201


>d1m47a_ a.26.1.2 (A:) Interleukin-2 (IL-2) {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 128

 Score = 24.0 bits (52), Expect = 2.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 31 SQMLALNFQTPDKAMQVNH 49
          ++ML   F  P KA ++ H
Sbjct: 32 TRMLTFKFYMPKKATELKH 50


>d1evha_ b.55.1.4 (A:) Enabled {Mouse (Mus musculus) [TaxId:
          10090]}
          Length = 111

 Score = 23.8 bits (51), Expect = 2.8
 Identities = 6/19 (31%), Positives = 9/19 (47%)

Query: 26 LWNVGSQMLALNFQTPDKA 44
           W    Q+  LNF + + A
Sbjct: 78 QWRDARQVYGLNFGSKEDA 96


>d1mkea1 b.55.1.4 (A:31-144) Actin regulatory protein WASP {Rat
          (Rattus norvegicus) [TaxId: 10116]}
          Length = 114

 Score = 22.9 bits (49), Expect = 4.8
 Identities = 5/18 (27%), Positives = 10/18 (55%)

Query: 27 WNVGSQMLALNFQTPDKA 44
          +   +  +ALNF   ++A
Sbjct: 82 FAGDTCQVALNFANEEEA 99


>d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain
           {Thermus thermophilus [TaxId: 274]}
          Length = 214

 Score = 22.6 bits (48), Expect = 8.0
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 5/42 (11%)

Query: 46  QVNHAKFRMNGGCGYLL-----RPAFMFSESYDPYDPENSYP 82
            V HA  R N G  + L          F + Y  +   +  P
Sbjct: 103 AVFHALVRKNFGATHFLVGRDHAGVGDFYDPYAAHRIFDRLP 144


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.136    0.430 

Gapped
Lambda     K      H
   0.267   0.0531    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 310,801
Number of extensions: 11257
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 8
Length of query: 82
Length of database: 2,407,596
Length adjustment: 48
Effective length of query: 34
Effective length of database: 1,748,556
Effective search space: 59450904
Effective search space used: 59450904
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.3 bits)