BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12825
(488 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1I0Z|A Chain A, Human Heart L-Lactate Dehydrogenase H Chain, Ternary
Complex With Nadh And Oxamate
pdb|1I0Z|B Chain B, Human Heart L-Lactate Dehydrogenase H Chain, Ternary
Complex With Nadh And Oxamate
Length = 333
Score = 410 bits (1054), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/323 (59%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 169 VAPSIES----PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQH 224
+AP E P+ KITVVG GQVGMAC SIL + + L+D ED+ KGEM+DLQH
Sbjct: 8 IAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQH 67
Query: 225 GAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG 284
G+ FL++PKI + D +++ S+IV++TAGVR GE+RL LV RNV +FK +IP+I K
Sbjct: 68 GSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY 127
Query: 285 SPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHG 344
SPDCI++++SNPVD+LTY++WKLSG PK+RVIGSG NLDS RFR L+A+KLG+ P S HG
Sbjct: 128 SPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLGIHPSSCHG 187
Query: 345 FIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGY 404
+I+GEHGDSSV VWSGVNVAGV+L+ELNP +GT+ D+EN+ +H VV SAYEVIKLKGY
Sbjct: 188 WILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAYEVIKLKGY 247
Query: 405 TSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQN 464
T+WA+GLSVA + ++L N ++IH VST+++G +GIE EVFLSLPC++ G+T +INQ
Sbjct: 248 TNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARGLTSVINQK 307
Query: 465 LTPDEAEKLRKSAATISQIQKGL 487
L DE +L+KSA T+ IQK L
Sbjct: 308 LKDDEVAQLKKSADTLWDIQKDL 330
>pdb|1T2F|A Chain A, Human B Lactate Dehydrogenase Complexed With Nad+ And 4-
Hydroxy-1,2,5-Oxadiazole-3-Carboxylic Acid
pdb|1T2F|B Chain B, Human B Lactate Dehydrogenase Complexed With Nad+ And 4-
Hydroxy-1,2,5-Oxadiazole-3-Carboxylic Acid
pdb|1T2F|C Chain C, Human B Lactate Dehydrogenase Complexed With Nad+ And 4-
Hydroxy-1,2,5-Oxadiazole-3-Carboxylic Acid
pdb|1T2F|D Chain D, Human B Lactate Dehydrogenase Complexed With Nad+ And 4-
Hydroxy-1,2,5-Oxadiazole-3-Carboxylic Acid
Length = 333
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/323 (59%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 169 VAPSIES----PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQH 224
+AP E P+ KITVVG GQVGMAC SIL + + L+D ED+ KGEM+DLQH
Sbjct: 8 IAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQH 67
Query: 225 GAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG 284
G+ FL++PKI + D +++ S+IV++TAGVR GE+RL LV RNV +FK +IP+I K
Sbjct: 68 GSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY 127
Query: 285 SPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHG 344
SPDCI++++SNPVD+LTY++WKLSG PK+RVIGSG NLDS RFR L+A+KLG+ P S HG
Sbjct: 128 SPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLGIHPSSCHG 187
Query: 345 FIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGY 404
+I+GEHGDSSV VWSGVNVAGV+L+ELNP +GT+ D+EN+ +H VV SAYEVIKLKGY
Sbjct: 188 WILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAYEVIKLKGY 247
Query: 405 TSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQN 464
T+WA+GLSVA + ++L N ++IH VST+++G +GIE EVFLSLPC++ G+T +INQ
Sbjct: 248 TNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARGLTSVINQK 307
Query: 465 LTPDEAEKLRKSAATISQIQKGL 487
L DE +L+KSA T+ IQK L
Sbjct: 308 LKDDEVAQLKKSADTLWDIQKDL 330
>pdb|5LDH|A Chain A, Structure Of The Active Ternary Complex Of Pig Heart
Lactate Dehydrogenase With S-Lac-Nad At 2.7 Angstroms
Resolution
pdb|5LDH|B Chain B, Structure Of The Active Ternary Complex Of Pig Heart
Lactate Dehydrogenase With S-Lac-Nad At 2.7 Angstroms
Resolution
Length = 334
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/312 (59%), Positives = 243/312 (77%)
Query: 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE 235
PD KITVVG GQVGMAC SIL + + L+D ED+ KGEM+DLQHG+ FL++PKI
Sbjct: 20 PDNKITVVGVGQVGMACAISILGKSLTDELALVDVLEDKLKGEMMDLQHGSLFLQTPKIV 79
Query: 236 SGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295
+ D +++ S+IV++TAGVR GE+RL LV RNV +FK +IP+I K SP+CI++++SN
Sbjct: 80 ANKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPNCIIIVVSN 139
Query: 296 PVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSV 355
PVD+LTY++WKLSG PK+RVIGSG NLDS RFR L+ +KLG+ P S HG+I+GEHGDSSV
Sbjct: 140 PVDILTYVAWKLSGLPKHRVIGSGCNLDSARFRYLMGEKLGVHPSSCHGWILGEHGDSSV 199
Query: 356 PVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVAS 415
VWSGVNVAGV L++LNP +GT+ D+EN+ +H VV SAYEVIKLKGYT+WA+GLSVA
Sbjct: 200 AVWSGVNVAGVVLQQLNPEMGTDNDSENWKEVHKMVVESAYEVIKLKGYTNWAIGLSVAD 259
Query: 416 ISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRK 475
+ ++L N ++IH VST++QG +GIE EVFLSLPCV+ G+T +INQ L DE +L+
Sbjct: 260 LIESMLKNLSRIHPVSTMVQGMYGIENEVFLSLPCVLNARGLTSVINQKLKDDEVAQLKN 319
Query: 476 SAATISQIQKGL 487
SA T+ IQK L
Sbjct: 320 SADTLWGIQKDL 331
>pdb|4AJ1|A Chain A, Rat Ldha In Complex With N-(2-(Methylamino)-1,3-
Benzothiazol-6-Yl)acetamide
pdb|4AJ1|B Chain B, Rat Ldha In Complex With N-(2-(Methylamino)-1,3-
Benzothiazol-6-Yl)acetamide
pdb|4AJ1|C Chain C, Rat Ldha In Complex With N-(2-(Methylamino)-1,3-
Benzothiazol-6-Yl)acetamide
pdb|4AJ1|D Chain D, Rat Ldha In Complex With N-(2-(Methylamino)-1,3-
Benzothiazol-6-Yl)acetamide
pdb|4AJ2|A Chain A, Rat Ldha In Complex With 5-(2-Chlorophenyl)-1h-Tetrazole
pdb|4AJ2|B Chain B, Rat Ldha In Complex With 5-(2-Chlorophenyl)-1h-Tetrazole
pdb|4AJ2|C Chain C, Rat Ldha In Complex With 5-(2-Chlorophenyl)-1h-Tetrazole
pdb|4AJ2|D Chain D, Rat Ldha In Complex With 5-(2-Chlorophenyl)-1h-Tetrazole
pdb|4AJE|A Chain A, Rat Ldha In Complex With 2-(4-Bromophenoxy)propanedioic
Acid
pdb|4AJE|B Chain B, Rat Ldha In Complex With 2-(4-Bromophenoxy)propanedioic
Acid
pdb|4AJE|C Chain C, Rat Ldha In Complex With 2-(4-Bromophenoxy)propanedioic
Acid
pdb|4AJE|D Chain D, Rat Ldha In Complex With 2-(4-Bromophenoxy)propanedioic
Acid
pdb|4AJH|A Chain A, Rat Ldha In Complex With
N-(2-Methyl-1,3-Benzothiazol-6-Yl)-3-Ureido- Propanamide
And 2-(4-Bromophenoxy)propanedioic Acid
pdb|4AJH|B Chain B, Rat Ldha In Complex With
N-(2-Methyl-1,3-Benzothiazol-6-Yl)-3-Ureido- Propanamide
And 2-(4-Bromophenoxy)propanedioic Acid
pdb|4AJH|C Chain C, Rat Ldha In Complex With
N-(2-Methyl-1,3-Benzothiazol-6-Yl)-3-Ureido- Propanamide
And 2-(4-Bromophenoxy)propanedioic Acid
pdb|4AJH|D Chain D, Rat Ldha In Complex With
N-(2-Methyl-1,3-Benzothiazol-6-Yl)-3-Ureido- Propanamide
And 2-(4-Bromophenoxy)propanedioic Acid
pdb|4AJI|A Chain A, Rat Ldha In Complex With 2-((3,4-Dimethoxyphenyl)methyl))
Propanedioic Acid
pdb|4AJI|B Chain B, Rat Ldha In Complex With 2-((3,4-Dimethoxyphenyl)methyl))
Propanedioic Acid
pdb|4AJI|C Chain C, Rat Ldha In Complex With 2-((3,4-Dimethoxyphenyl)methyl))
Propanedioic Acid
pdb|4AJI|D Chain D, Rat Ldha In Complex With 2-((3,4-Dimethoxyphenyl)methyl))
Propanedioic Acid
pdb|4AJJ|A Chain A, Rat Ldha In Complex With 2-((3,4-Dimethoxyphenyl)methyl))
Propanedioic Acid And
N-(2-Methyl-1,3-Benzothiazol-6-Yl)-3- Ureido-Propanamide
pdb|4AJJ|B Chain B, Rat Ldha In Complex With 2-((3,4-Dimethoxyphenyl)methyl))
Propanedioic Acid And
N-(2-Methyl-1,3-Benzothiazol-6-Yl)-3- Ureido-Propanamide
pdb|4AJJ|C Chain C, Rat Ldha In Complex With 2-((3,4-Dimethoxyphenyl)methyl))
Propanedioic Acid And
N-(2-Methyl-1,3-Benzothiazol-6-Yl)-3- Ureido-Propanamide
pdb|4AJJ|D Chain D, Rat Ldha In Complex With 2-((3,4-Dimethoxyphenyl)methyl))
Propanedioic Acid And
N-(2-Methyl-1,3-Benzothiazol-6-Yl)-3- Ureido-Propanamide
pdb|4AJK|A Chain A, Rat Ldha In Complex With
N-(2-(Methylamino)-1,3-Benzothiazol-6-Yl) Acetamide
pdb|4AJK|B Chain B, Rat Ldha In Complex With
N-(2-(Methylamino)-1,3-Benzothiazol-6-Yl) Acetamide
pdb|4AJK|C Chain C, Rat Ldha In Complex With
N-(2-(Methylamino)-1,3-Benzothiazol-6-Yl) Acetamide
pdb|4AJK|D Chain D, Rat Ldha In Complex With
N-(2-(Methylamino)-1,3-Benzothiazol-6-Yl) Acetamide
pdb|4AJL|A Chain A, Rat Ldha In Complex With
3-(Ethylcarbamoylamino)-N-(2-Methyl-1,3-
Benzothiazol-6-Yl)propanamide
pdb|4AJL|B Chain B, Rat Ldha In Complex With
3-(Ethylcarbamoylamino)-N-(2-Methyl-1,3-
Benzothiazol-6-Yl)propanamide
pdb|4AJL|C Chain C, Rat Ldha In Complex With
3-(Ethylcarbamoylamino)-N-(2-Methyl-1,3-
Benzothiazol-6-Yl)propanamide
pdb|4AJL|D Chain D, Rat Ldha In Complex With
3-(Ethylcarbamoylamino)-N-(2-Methyl-1,3-
Benzothiazol-6-Yl)propanamide
pdb|4AJN|A Chain A, Rat Ldha In Complex With 2-((4-(2-((3-((2-Methyl-1,3-
Benzothiazol-6-Yl)amino)-3-Oxo-
Propyl)carbamoylamino)ethyl) Phenyl)methyl)propanedioic
Acid
pdb|4AJN|B Chain B, Rat Ldha In Complex With 2-((4-(2-((3-((2-Methyl-1,3-
Benzothiazol-6-Yl)amino)-3-Oxo-
Propyl)carbamoylamino)ethyl) Phenyl)methyl)propanedioic
Acid
pdb|4AJN|C Chain C, Rat Ldha In Complex With 2-((4-(2-((3-((2-Methyl-1,3-
Benzothiazol-6-Yl)amino)-3-Oxo-
Propyl)carbamoylamino)ethyl) Phenyl)methyl)propanedioic
Acid
pdb|4AJN|D Chain D, Rat Ldha In Complex With 2-((4-(2-((3-((2-Methyl-1,3-
Benzothiazol-6-Yl)amino)-3-Oxo-
Propyl)carbamoylamino)ethyl) Phenyl)methyl)propanedioic
Acid
pdb|4AJO|A Chain A, Rat Ldha In Complex With 2-((4-(4-((3-((2-Methyl-1,3-
Benzothiazol-6yl)amino)-3-Oxo-Propyl)amino)-4-Oxo-Butyl)
Phenyl)methyl)propanedioic Acid
pdb|4AJO|B Chain B, Rat Ldha In Complex With 2-((4-(4-((3-((2-Methyl-1,3-
Benzothiazol-6yl)amino)-3-Oxo-Propyl)amino)-4-Oxo-Butyl)
Phenyl)methyl)propanedioic Acid
pdb|4AJO|C Chain C, Rat Ldha In Complex With 2-((4-(4-((3-((2-Methyl-1,3-
Benzothiazol-6yl)amino)-3-Oxo-Propyl)amino)-4-Oxo-Butyl)
Phenyl)methyl)propanedioic Acid
pdb|4AJO|D Chain D, Rat Ldha In Complex With 2-((4-(4-((3-((2-Methyl-1,3-
Benzothiazol-6yl)amino)-3-Oxo-Propyl)amino)-4-Oxo-Butyl)
Phenyl)methyl)propanedioic Acid
pdb|4AL4|A Chain A, Rat Ldha In Complex With
2-((4-(2-((3-((2-Methyl-1,3-Benzothiazol-6-
Yl)amino)3-Oxo-Propyl)carbamoylamino)ethoxy) Phenyl)
Methylpropanedioic Acid
pdb|4AL4|B Chain B, Rat Ldha In Complex With
2-((4-(2-((3-((2-Methyl-1,3-Benzothiazol-6-
Yl)amino)3-Oxo-Propyl)carbamoylamino)ethoxy) Phenyl)
Methylpropanedioic Acid
pdb|4AL4|C Chain C, Rat Ldha In Complex With
2-((4-(2-((3-((2-Methyl-1,3-Benzothiazol-6-
Yl)amino)3-Oxo-Propyl)carbamoylamino)ethoxy) Phenyl)
Methylpropanedioic Acid
pdb|4AL4|D Chain D, Rat Ldha In Complex With
2-((4-(2-((3-((2-Methyl-1,3-Benzothiazol-6-
Yl)amino)3-Oxo-Propyl)carbamoylamino)ethoxy) Phenyl)
Methylpropanedioic Acid
Length = 331
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 247/325 (76%)
Query: 163 DRLLSQVAPSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDL 222
D+L+ + + P KITVVG G VGMAC SIL + + L+D ED+ KGEM+DL
Sbjct: 5 DQLIVNLLKEEQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDL 64
Query: 223 QHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIA 282
QHG+ FL++PKI S D +++ S++VIITAG R GE+RL LV RNV IFK +IP +
Sbjct: 65 QHGSLFLKTPKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVV 124
Query: 283 KGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESV 342
K SP C LLI+SNPVD+LTY++WK+SGFPKNRVIGSG NLDS RFR L+ ++LG+ P S
Sbjct: 125 KYSPQCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSC 184
Query: 343 HGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK 402
HG+++GEHGDSSVPVWSGVNVAGV+LK LNP +GT+ D E + +H VV+SAYEVIKLK
Sbjct: 185 HGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKLK 244
Query: 403 GYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIIN 462
GYTSWA+GLSVA ++ +++ N ++H +ST+I+G +GI+E+VFLS+PC++ NG++ ++
Sbjct: 245 GYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVK 304
Query: 463 QNLTPDEAEKLRKSAATISQIQKGL 487
LTPDE +L+KSA T+ IQK L
Sbjct: 305 VTLTPDEEARLKKSADTLWGIQKEL 329
>pdb|4AJ4|A Chain A, Rat Ldha In Complex With
4-((2-Allylsulfanyl-1,3-Benzothizol-6-Yl)
Amino)-4-Oxo-Butanoic Acid
pdb|4AJ4|B Chain B, Rat Ldha In Complex With
4-((2-Allylsulfanyl-1,3-Benzothizol-6-Yl)
Amino)-4-Oxo-Butanoic Acid
pdb|4AJ4|C Chain C, Rat Ldha In Complex With
4-((2-Allylsulfanyl-1,3-Benzothizol-6-Yl)
Amino)-4-Oxo-Butanoic Acid
pdb|4AJ4|D Chain D, Rat Ldha In Complex With
4-((2-Allylsulfanyl-1,3-Benzothizol-6-Yl)
Amino)-4-Oxo-Butanoic Acid
Length = 332
Score = 404 bits (1037), Expect = e-113, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 247/325 (76%)
Query: 163 DRLLSQVAPSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDL 222
D+L+ + + P KITVVG G VGMAC SIL + + L+D ED+ KGEM+DL
Sbjct: 6 DQLIVNLLKEEQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDL 65
Query: 223 QHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIA 282
QHG+ FL++PKI S D +++ S++VIITAG R GE+RL LV RNV IFK +IP +
Sbjct: 66 QHGSLFLKTPKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVV 125
Query: 283 KGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESV 342
K SP C LLI+SNPVD+LTY++WK+SGFPKNRVIGSG NLDS RFR L+ ++LG+ P S
Sbjct: 126 KYSPQCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSC 185
Query: 343 HGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK 402
HG+++GEHGDSSVPVWSGVNVAGV+LK LNP +GT+ D E + +H VV+SAYEVIKLK
Sbjct: 186 HGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKLK 245
Query: 403 GYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIIN 462
GYTSWA+GLSVA ++ +++ N ++H +ST+I+G +GI+E+VFLS+PC++ NG++ ++
Sbjct: 246 GYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVK 305
Query: 463 QNLTPDEAEKLRKSAATISQIQKGL 487
LTPDE +L+KSA T+ IQK L
Sbjct: 306 VTLTPDEEARLKKSADTLWGIQKEL 330
>pdb|9LDT|A Chain A, Design And Synthesis Of New Enzymes Based On The Lactate
Dehydrogenase Framework
pdb|9LDT|B Chain B, Design And Synthesis Of New Enzymes Based On The Lactate
Dehydrogenase Framework
pdb|9LDB|A Chain A, Design And Synthesis Of New Enzymes Based On The Lactate
Dehydrogenase Framework
pdb|9LDB|B Chain B, Design And Synthesis Of New Enzymes Based On The Lactate
Dehydrogenase Framework
Length = 332
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 186/325 (57%), Positives = 247/325 (76%)
Query: 163 DRLLSQVAPSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDL 222
D+L+ + P KITVVG G VGMAC SIL + + L+D ED+ KGEM+DL
Sbjct: 6 DQLIHNLLKEEHVPHNKITVVGVGAVGMACAISILMKELADEIALVDVMEDKLKGEMMDL 65
Query: 223 QHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIA 282
QHG+ FLR+PKI SG D ++ SR+V+ITAG R GE+RL LV RNV IFK +IP I
Sbjct: 66 QHGSLFLRTPKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIV 125
Query: 283 KGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESV 342
K SP+C LL++SNPVD+LTY++WK+SGFPKNRVIGSG NLDS RFR L+ ++LG+ P S
Sbjct: 126 KYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSC 185
Query: 343 HGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK 402
HG+I+GEHGDSSVPVWSGVNVAGV+LK L+P +GT+ D E++ +H +VV+SAYEVIKLK
Sbjct: 186 HGWILGEHGDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKEVVDSAYEVIKLK 245
Query: 403 GYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIIN 462
GYTSWA+GLSVA ++ +++ N ++H +ST+I+G +GI+E VFLS+PC++ NG++ ++
Sbjct: 246 GYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKENVFLSVPCILGQNGISDVVK 305
Query: 463 QNLTPDEAEKLRKSAATISQIQKGL 487
LTP+E L+KSA T+ IQK L
Sbjct: 306 VTLTPEEEAHLKKSADTLWGIQKEL 330
>pdb|1I10|A Chain A, Human Muscle L-Lactate Dehydrogenase M Chain, Ternary
Complex With Nadh And Oxamate
pdb|1I10|B Chain B, Human Muscle L-Lactate Dehydrogenase M Chain, Ternary
Complex With Nadh And Oxamate
pdb|1I10|C Chain C, Human Muscle L-Lactate Dehydrogenase M Chain, Ternary
Complex With Nadh And Oxamate
pdb|1I10|D Chain D, Human Muscle L-Lactate Dehydrogenase M Chain, Ternary
Complex With Nadh And Oxamate
pdb|1I10|E Chain E, Human Muscle L-Lactate Dehydrogenase M Chain, Ternary
Complex With Nadh And Oxamate
pdb|1I10|F Chain F, Human Muscle L-Lactate Dehydrogenase M Chain, Ternary
Complex With Nadh And Oxamate
pdb|1I10|G Chain G, Human Muscle L-Lactate Dehydrogenase M Chain, Ternary
Complex With Nadh And Oxamate
pdb|1I10|H Chain H, Human Muscle L-Lactate Dehydrogenase M Chain, Ternary
Complex With Nadh And Oxamate
Length = 331
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 248/325 (76%)
Query: 163 DRLLSQVAPSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDL 222
D+L+ + ++P KITVVG G VGMAC SIL + + L+D ED+ KGEM+DL
Sbjct: 5 DQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDL 64
Query: 223 QHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIA 282
QHG+ FLR+PKI SG D ++ S++VIITAG R GE+RL LV RNV IFK +IP +
Sbjct: 65 QHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVV 124
Query: 283 KGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESV 342
K SP+C LLI+SNPVD+LTY++WK+SGFPKNRVIGSG NLDS RFR L+ ++LG+ P S
Sbjct: 125 KYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSC 184
Query: 343 HGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK 402
HG+++GEHGDSSVPVWSG+NVAGV+LK L+P +GT++D E + +H VV SAYEVIKLK
Sbjct: 185 HGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLK 244
Query: 403 GYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIIN 462
GYTSWA+GLSVA ++ +++ N ++H VST+I+G +GI+++VFLS+PC++ NG++ ++
Sbjct: 245 GYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVK 304
Query: 463 QNLTPDEAEKLRKSAATISQIQKGL 487
LT +E +L+KSA T+ IQK L
Sbjct: 305 VTLTSEEEARLKKSADTLWGIQKEL 329
>pdb|4AJP|A Chain A, Human Ldha In Complex With 2-((4-(4-((3-((2-Methyl-1,3-
Benzothiazol-6yl)amino)-3-Oxo-Propyl)amino)-4-Oxo-Butyl)
Phenyl)methyl)propanedioic Acid
pdb|4AJP|B Chain B, Human Ldha In Complex With 2-((4-(4-((3-((2-Methyl-1,3-
Benzothiazol-6yl)amino)-3-Oxo-Propyl)amino)-4-Oxo-Butyl)
Phenyl)methyl)propanedioic Acid
pdb|4AJP|C Chain C, Human Ldha In Complex With 2-((4-(4-((3-((2-Methyl-1,3-
Benzothiazol-6yl)amino)-3-Oxo-Propyl)amino)-4-Oxo-Butyl)
Phenyl)methyl)propanedioic Acid
pdb|4AJP|D Chain D, Human Ldha In Complex With 2-((4-(4-((3-((2-Methyl-1,3-
Benzothiazol-6yl)amino)-3-Oxo-Propyl)amino)-4-Oxo-Butyl)
Phenyl)methyl)propanedioic Acid
Length = 337
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 248/325 (76%)
Query: 163 DRLLSQVAPSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDL 222
D+L+ + ++P KITVVG G VGMAC SIL + + L+D ED+ KGEM+DL
Sbjct: 5 DQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDL 64
Query: 223 QHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIA 282
QHG+ FLR+PKI SG D ++ S++VIITAG R GE+RL LV RNV IFK +IP +
Sbjct: 65 QHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVV 124
Query: 283 KGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESV 342
K SP+C LLI+SNPVD+LTY++WK+SGFPKNRVIGSG NLDS RFR L+ ++LG+ P S
Sbjct: 125 KYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSC 184
Query: 343 HGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK 402
HG+++GEHGDSSVPVWSG+NVAGV+LK L+P +GT++D E + +H VV SAYEVIKLK
Sbjct: 185 HGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLK 244
Query: 403 GYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIIN 462
GYTSWA+GLSVA ++ +++ N ++H VST+I+G +GI+++VFLS+PC++ NG++ ++
Sbjct: 245 GYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVK 304
Query: 463 QNLTPDEAEKLRKSAATISQIQKGL 487
LT +E +L+KSA T+ IQK L
Sbjct: 305 VTLTSEEEARLKKSADTLWGIQKEL 329
>pdb|3H3F|A Chain A, Rabbit Muscle L-Lactate Dehydrogenase In Complex With Nadh
And Oxamate
pdb|3H3F|B Chain B, Rabbit Muscle L-Lactate Dehydrogenase In Complex With Nadh
And Oxamate
pdb|3H3F|C Chain C, Rabbit Muscle L-Lactate Dehydrogenase In Complex With Nadh
And Oxamate
pdb|3H3F|D Chain D, Rabbit Muscle L-Lactate Dehydrogenase In Complex With Nadh
And Oxamate
pdb|3H3F|E Chain E, Rabbit Muscle L-Lactate Dehydrogenase In Complex With Nadh
And Oxamate
pdb|3H3F|F Chain F, Rabbit Muscle L-Lactate Dehydrogenase In Complex With Nadh
And Oxamate
pdb|3H3F|G Chain G, Rabbit Muscle L-Lactate Dehydrogenase In Complex With Nadh
And Oxamate
pdb|3H3F|H Chain H, Rabbit Muscle L-Lactate Dehydrogenase In Complex With Nadh
And Oxamate
pdb|4I8X|A Chain A, Crystal Structure Of Rabbit Ldha In Complex With Ap27460
pdb|4I8X|B Chain B, Crystal Structure Of Rabbit Ldha In Complex With Ap27460
pdb|4I8X|C Chain C, Crystal Structure Of Rabbit Ldha In Complex With Ap27460
pdb|4I8X|D Chain D, Crystal Structure Of Rabbit Ldha In Complex With Ap27460
pdb|4I8X|E Chain E, Crystal Structure Of Rabbit Ldha In Complex With Ap27460
pdb|4I8X|F Chain F, Crystal Structure Of Rabbit Ldha In Complex With Ap27460
pdb|4I8X|G Chain G, Crystal Structure Of Rabbit Ldha In Complex With Ap27460
pdb|4I8X|H Chain H, Crystal Structure Of Rabbit Ldha In Complex With Ap27460
pdb|4I9H|A Chain A, Crystal Structure Of Rabbit Ldha In Complex With Ap28669
pdb|4I9H|B Chain B, Crystal Structure Of Rabbit Ldha In Complex With Ap28669
pdb|4I9H|C Chain C, Crystal Structure Of Rabbit Ldha In Complex With Ap28669
pdb|4I9H|D Chain D, Crystal Structure Of Rabbit Ldha In Complex With Ap28669
pdb|4I9H|E Chain E, Crystal Structure Of Rabbit Ldha In Complex With Ap28669
pdb|4I9H|F Chain F, Crystal Structure Of Rabbit Ldha In Complex With Ap28669
pdb|4I9H|G Chain G, Crystal Structure Of Rabbit Ldha In Complex With Ap28669
pdb|4I9H|H Chain H, Crystal Structure Of Rabbit Ldha In Complex With Ap28669
pdb|4I9N|A Chain A, Crystal Structure Of Rabbit Ldha In Complex With Ap28161
And Ap28122
pdb|4I9N|B Chain B, Crystal Structure Of Rabbit Ldha In Complex With Ap28161
And Ap28122
pdb|4I9N|C Chain C, Crystal Structure Of Rabbit Ldha In Complex With Ap28161
And Ap28122
pdb|4I9N|D Chain D, Crystal Structure Of Rabbit Ldha In Complex With Ap28161
And Ap28122
pdb|4I9N|E Chain E, Crystal Structure Of Rabbit Ldha In Complex With Ap28161
And Ap28122
pdb|4I9N|F Chain F, Crystal Structure Of Rabbit Ldha In Complex With Ap28161
And Ap28122
pdb|4I9N|G Chain G, Crystal Structure Of Rabbit Ldha In Complex With Ap28161
And Ap28122
pdb|4I9N|H Chain H, Crystal Structure Of Rabbit Ldha In Complex With Ap28161
And Ap28122
pdb|4I9U|A Chain A, Crystal Structure Of Rabbit Ldha In Complex With A
Fragment Inhibitor Ap26256
pdb|4I9U|B Chain B, Crystal Structure Of Rabbit Ldha In Complex With A
Fragment Inhibitor Ap26256
pdb|4I9U|C Chain C, Crystal Structure Of Rabbit Ldha In Complex With A
Fragment Inhibitor Ap26256
pdb|4I9U|D Chain D, Crystal Structure Of Rabbit Ldha In Complex With A
Fragment Inhibitor Ap26256
pdb|4I9U|E Chain E, Crystal Structure Of Rabbit Ldha In Complex With A
Fragment Inhibitor Ap26256
pdb|4I9U|F Chain F, Crystal Structure Of Rabbit Ldha In Complex With A
Fragment Inhibitor Ap26256
pdb|4I9U|G Chain G, Crystal Structure Of Rabbit Ldha In Complex With A
Fragment Inhibitor Ap26256
pdb|4I9U|H Chain H, Crystal Structure Of Rabbit Ldha In Complex With A
Fragment Inhibitor Ap26256
Length = 331
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 245/325 (75%)
Query: 163 DRLLSQVAPSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDL 222
D+L+ + P KITVVG G VGMAC SIL + + L+D ED+ KGEM+DL
Sbjct: 5 DQLIHNLLKEEHVPQNKITVVGVGAVGMACAISILMKDLADELALVDVMEDKLKGEMMDL 64
Query: 223 QHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIA 282
QHG+ FLR+PKI SG D +++ S++VIITAG R GE+RL LV RNV IFK +IP +
Sbjct: 65 QHGSLFLRTPKIVSGKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVV 124
Query: 283 KGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESV 342
K SP C LL++SNPVD+LTY++WK+SGFPKNRVIGSG NLDS RFR L+ ++LG+ S
Sbjct: 125 KYSPHCKLLVVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHALSC 184
Query: 343 HGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK 402
HG+I+GEHGDSSVPVWSG+NVAGV+LK L+P +GT+ D E + ++H VV+SAYEVIKLK
Sbjct: 185 HGWILGEHGDSSVPVWSGMNVAGVSLKTLHPELGTDADKEQWKQVHKQVVDSAYEVIKLK 244
Query: 403 GYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIIN 462
GYT+WA+GLSVA ++ +++ N ++H +ST+++G +GI+E+VFLS+PCV+ NG++ ++
Sbjct: 245 GYTTWAIGLSVADLAESIMKNLRRVHPISTMLKGLYGIKEDVFLSVPCVLGQNGISDVVK 304
Query: 463 QNLTPDEAEKLRKSAATISQIQKGL 487
LT +E L+KSA T+ IQK L
Sbjct: 305 VTLTSEEEAHLKKSADTLWGIQKEL 329
>pdb|2LDX|A Chain A, Characterization Of The Antigenic Sites On The Refined 3-
Angstroms Resolution Structure Of Mouse Testicular
Lactate Dehydrogenase C4
pdb|2LDX|B Chain B, Characterization Of The Antigenic Sites On The Refined 3-
Angstroms Resolution Structure Of Mouse Testicular
Lactate Dehydrogenase C4
pdb|2LDX|C Chain C, Characterization Of The Antigenic Sites On The Refined 3-
Angstroms Resolution Structure Of Mouse Testicular
Lactate Dehydrogenase C4
pdb|2LDX|D Chain D, Characterization Of The Antigenic Sites On The Refined 3-
Angstroms Resolution Structure Of Mouse Testicular
Lactate Dehydrogenase C4
Length = 331
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 173/329 (52%), Positives = 244/329 (74%), Gaps = 1/329 (0%)
Query: 160 STV-DRLLSQVAPSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGE 218
STV ++L+ + P + KITVVG G VGMAC SIL +G+ L+D++ D+ +GE
Sbjct: 1 STVKEQLIQNLVPEDKLSRCKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGE 60
Query: 219 MLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLI 278
LDLQHG+ FL +PKI G D +S S++VIITAG R + G+TRL L+ RNV I K ++
Sbjct: 61 ALDLQHGSLFLSTPKIVFGKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIV 120
Query: 279 PKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLS 338
P + + SPDC +++++NPVD+LTY+ WK+SGFP RVIGSG NLDS RFR L+ +KLG++
Sbjct: 121 PGVIQNSPDCKIIVVTNPVDILTYVVWKISGFPVGRVIGSGCNLDSARFRYLIGEKLGVN 180
Query: 339 PESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEV 398
P S HG+++GEHGDSSVP+WSGVNVAGVTLK LNP IGT+++ +++ +H VV YEV
Sbjct: 181 PTSCHGWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDKNKQHWKNVHKQVVEGGYEV 240
Query: 399 IKLKGYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVT 458
+ +KGYTSWA+GLSV ++ ++L N ++H V+TL++G HGI+EEVFLS+PCV+ ++G+T
Sbjct: 241 LDMKGYTSWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHGIKEEVFLSIPCVLGESGIT 300
Query: 459 HIINQNLTPDEAEKLRKSAATISQIQKGL 487
+ N+T +E L+KSA T+ +QK L
Sbjct: 301 DFVKVNMTAEEEGLLKKSADTLWNMQKNL 329
>pdb|6LDH|A Chain A, Refined Crystal Structure Of Dogfish M4 Apo-Lactate
Dehydrogenase
pdb|8LDH|A Chain A, Refined Crystal Structure Of Dogfish M4 Apo-Lactate
Dehydrogenase
Length = 330
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 163 DRLLSQVAPSIE-SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLD 221
D+L+ +A S E KITVVG G VGMAC SIL + + L+D ED+ KGEM+D
Sbjct: 6 DKLIGHLATSQEPRSYNKITVVGVGAVGMACAISILMKDLADEVALVDVMEDKLKGEMMD 65
Query: 222 LQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKI 281
LQHG+ FL + KI SG D ++S GS++V+ITAG R GE+RL LV RNV IFK +IP I
Sbjct: 66 LQHGSLFLHTAKIVSGKDYSVSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNI 125
Query: 282 AKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPES 341
K SPDCI+L++SNPVDVLTY++WKLSG P +R+IGSG NLDS RFR L+ ++LG+ S
Sbjct: 126 VKHSPDCIILVVSNPVDVLTYVAWKLSGLPMHRIIGSGCNLDSARFRYLMGERLGVHSCS 185
Query: 342 VHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKL 401
HG++IGEHGDS VWSG+NVA + +L+P GT +D +++ +LH DVV+SAYEVIKL
Sbjct: 186 CHGWVIGEHGDSVPSVWSGMNVASI---KLHPLDGTNKDKQDWKKLHKDVVDSAYEVIKL 242
Query: 402 KGYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHII 461
KGYTSWA+GLSVA ++ T++ N ++H VST+++ +GI++ VFLSLPCV+ D+G+++I+
Sbjct: 243 KGYTSWAIGLSVADLAETIMKNLCRVHPVSTMVKDFYGIKDNVFLSLPCVLNDHGISNIV 302
Query: 462 NQNLTPDEAEKLRKSAATISQIQKGL 487
L P+E ++L+KSA T+ IQK L
Sbjct: 303 KMKLKPNEEQQLQKSATTLWDIQKDL 328
>pdb|1LDM|A Chain A, Refined Crystal Structure Of Dogfish M4 Apo-Lactate
Dehydrogenase
Length = 329
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 163 DRLLSQVAPSIE-SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLD 221
D+L+ +A S E KITVVG G VGMAC SIL + + L+D ED+ KGEM+D
Sbjct: 5 DKLIGHLATSQEPRSYNKITVVGVGAVGMACAISILMKDLADEVALVDVMEDKLKGEMMD 64
Query: 222 LQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKI 281
LQHG+ FL + KI SG D ++S GS++V+ITAG R GE+RL LV RNV IFK +IP I
Sbjct: 65 LQHGSLFLHTAKIVSGKDYSVSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNI 124
Query: 282 AKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPES 341
K SPDCI+L++SNPVDVLTY++WKLSG P +R+IGSG NLDS RFR L+ ++LG+ S
Sbjct: 125 VKHSPDCIILVVSNPVDVLTYVAWKLSGLPMHRIIGSGCNLDSARFRYLMGERLGVHSCS 184
Query: 342 VHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKL 401
HG++IGEHGDS VWSG+NVA + +L+P GT +D +++ +LH DVV+SAYEVIKL
Sbjct: 185 CHGWVIGEHGDSVPSVWSGMNVASI---KLHPLDGTNKDKQDWKKLHKDVVDSAYEVIKL 241
Query: 402 KGYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHII 461
KGYTSWA+GLSVA ++ T++ N ++H VST+++ +GI++ VFLSLPCV+ D+G+++I+
Sbjct: 242 KGYTSWAIGLSVADLAETIMKNLCRVHPVSTMVKDFYGIKDNVFLSLPCVLNDHGISNIV 301
Query: 462 NQNLTPDEAEKLRKSAATISQIQKGL 487
L P+E ++L+KSA T+ IQK L
Sbjct: 302 KMKLKPNEEQQLQKSATTLWDIQKDL 327
>pdb|1V6A|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Cyprinus
Carpio
pdb|1V6A|B Chain B, Crystal Structure Of L-Lactate Dehydrogenase From Cyprinus
Carpio
Length = 332
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/329 (54%), Positives = 247/329 (75%), Gaps = 1/329 (0%)
Query: 160 STVDRLLSQVAPSIES-PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGE 218
ST ++L++ V+ + P K+TVVG G VGMA SIL + + L+D ED+ KGE
Sbjct: 2 STKEKLITHVSKEEPAGPTNKVTVVGVGMVGMAAAISILLKDLTDELALVDVMEDKLKGE 61
Query: 219 MLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLI 278
+DLQHG+ FL++ KI + D +++ S++V++TAG R GE+RL LV RNV IFK +I
Sbjct: 62 AMDLQHGSLFLKTHKIVADKDYSVTANSKVVVVTAGARQQEGESRLNLVQRNVNIFKFII 121
Query: 279 PKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLS 338
P I K SP+CILL++SNPVD+LTY++WKLSG P+NRVIGSGTNLDS RFR L+ +KLG+
Sbjct: 122 PNIIKYSPNCILLVVSNPVDILTYVAWKLSGLPRNRVIGSGTNLDSARFRHLMGEKLGIH 181
Query: 339 PESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEV 398
P + HG++IGEHGDSSVPVWSGVNVAGV L+ LNP +GT++D E++ +H VV+SAYEV
Sbjct: 182 PSNCHGWVIGEHGDSSVPVWSGVNVAGVFLQGLNPDMGTDKDKEDWKSVHKMVVDSAYEV 241
Query: 399 IKLKGYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVT 458
IKLKGYTSWA+G+S A + ++L N K H VSTL++G HG+ EEVFLS+PC++ ++G+T
Sbjct: 242 IKLKGYTSWAIGMSAADLCQSILKNLRKCHPVSTLVKGMHGVNEEVFLSVPCILGNSGLT 301
Query: 459 HIINQNLTPDEAEKLRKSAATISQIQKGL 487
+++ L DE ++L KSA T+ +QK L
Sbjct: 302 DVVHMTLKSDEEKQLVKSAETLWGVQKDL 330
>pdb|2V65|A Chain A, Apo Ldh From The Psychrophile C. Gunnari
pdb|2V65|B Chain B, Apo Ldh From The Psychrophile C. Gunnari
Length = 331
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 166/297 (55%), Positives = 230/297 (77%), Gaps = 1/297 (0%)
Query: 191 ACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVI 250
A SIL + + ++D ED+ KGE++DLQHG+ FL++ KI D +++ S++V+
Sbjct: 34 ASAISILLKDLCDELAMVDVMEDKLKGEVMDLQHGSLFLKT-KIVGDKDYSVTANSKVVV 92
Query: 251 ITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGF 310
+TAG R GE+RL LV RNV IFK +IP I K SP+CIL+++SNPVD+LTY++WKLSGF
Sbjct: 93 VTAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCILMVVSNPVDILTYVAWKLSGF 152
Query: 311 PKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKE 370
P++RVIGSGTNLDS RFR L+ +KL L P S H +I+GEHGDSSVPVWSGVNVAGV+L+
Sbjct: 153 PRHRVIGSGTNLDSARFRHLIGEKLHLHPSSCHAWIVGEHGDSSVPVWSGVNVAGVSLQG 212
Query: 371 LNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASISHTLLNNTNKIHAV 430
LNP +GTE D EN+ +H +VV+ AYEVIKLKGYTSWA+G+SVA + +++ N +K+H V
Sbjct: 213 LNPQMGTEGDGENWKAIHKEVVDGAYEVIKLKGYTSWAIGMSVADLVESIIKNMHKVHPV 272
Query: 431 STLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487
STL+QG HG+++EVFLS+PCV+ ++G+T +I+ L +E ++L+KSA T+ +QK L
Sbjct: 273 STLVQGMHGVKDEVFLSVPCVLGNSGLTDVIHMTLKAEEEKQLQKSAETLWGVQKEL 329
>pdb|3LDH|A Chain A, A Comparison Of The Structures Of Apo Dogfish M4 Lactate
Dehydrogenase And Its Ternary Complexes
Length = 330
Score = 281 bits (718), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 156/345 (45%), Positives = 212/345 (61%), Gaps = 42/345 (12%)
Query: 163 DRLLSQVAPSIE-SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLD 221
D+L+ +A S E KITVVG VGMA S+L + + L+D ED+ KGEM+D
Sbjct: 6 DKLIGHLATSQEPRSYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMD 65
Query: 222 LQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKI 281
L+HG+ FL + KI SG D ++S GS++V+ITAG R GE+RL LV RNV IFK +IP I
Sbjct: 66 LEHGSLFLHTAKIVSGKDYSVSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNI 125
Query: 282 AKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPES 341
K SPDC+ + WKLSG P +R+IGSG NLDS RFR L+ ++LG+
Sbjct: 126 VKHSPDCLKELHPELGTDKNKQDWKLSGLPMHRIIGSGCNLDSARFRYLMGERLGVHSCL 185
Query: 342 VHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKL 401
V G++IG+HGDS VWSG+ A +LH DVV+SAYEVIKL
Sbjct: 186 VIGWVIGQHGDSVPSVWSGMWDA---------------------KLHKDVVDSAYEVIKL 224
Query: 402 KGYTSWALGL-----------------SVASISHTLLNNTNKIHAVSTLIQGHHGIEEEV 444
KGYTSWA+GL SVA ++ T++ + ++H VST+++ +GI++ V
Sbjct: 225 KGYTSWAIGLVVSNPVDVLTYVAWKGCSVADLAQTIMKDLCRVHPVSTMVKDFYGIKDNV 284
Query: 445 FLSLPCVMADNGVTH--IINQNLTPDEAEKLRKSAATISQIQKGL 487
FLSLPCV+ +NG++H I+ L PDE ++L+KSA T+ IQK L
Sbjct: 285 FLSLPCVL-NNGISHCNIVKMKLKPDEEQQLQKSATTLWDIQKDL 328
>pdb|3VKU|A Chain A, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase
pdb|3VKU|B Chain B, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase
pdb|3VKU|C Chain C, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase
pdb|3VKU|D Chain D, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase
pdb|3VKU|E Chain E, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase
pdb|3VKU|F Chain F, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase
Length = 326
Score = 248 bits (632), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 197/309 (63%), Gaps = 9/309 (2%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG 237
QK+ +VG G VG + Y+++ QGI ++D +D+ KG+ +DL+ PF SPK
Sbjct: 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPF-TSPKKIYS 68
Query: 238 SDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297
++ + ++ + +V+ITAG GETRL LV++N+KI K ++ I + I L+ +NPV
Sbjct: 69 AEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128
Query: 298 DVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPV 357
D+LTY +WKLSGFPKNRV+GSGT+LD+ RFR +A+ + + SVH +I+GEHGD+ PV
Sbjct: 129 DILTYATWKLSGFPKNRVVGSGTSLDTARFRQSIAKMVNVDARSVHAYIMGEHGDTEFPV 188
Query: 358 WSGVNVAGVTLKEL---NPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVA 414
WS N+ GVT+ E +P I ++ V++ DV N AYE+IKLKG T + + ++A
Sbjct: 189 WSHANIGGVTIAEWVKAHPEIKEDK----LVKMFEDVRNKAYEIIKLKGATFYGIATALA 244
Query: 415 SISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLR 474
IS +LN+ N + +S + G +G+ ++++ P V+ NG+ +I+ LT E E ++
Sbjct: 245 RISKAILNDENAVLPLSVYMDGQYGL-NDIYIGTPAVINRNGIQNILEIPLTDHEEESMQ 303
Query: 475 KSAATISQI 483
KSA+ + ++
Sbjct: 304 KSASQLKKV 312
>pdb|2ZQY|A Chain A, T-State Structure Of Allosteric L-Lactate Dehydrogenase
From Lactobacillus Casei
pdb|2ZQY|B Chain B, T-State Structure Of Allosteric L-Lactate Dehydrogenase
From Lactobacillus Casei
pdb|2ZQY|C Chain C, T-State Structure Of Allosteric L-Lactate Dehydrogenase
From Lactobacillus Casei
pdb|2ZQY|D Chain D, T-State Structure Of Allosteric L-Lactate Dehydrogenase
From Lactobacillus Casei
pdb|2ZQZ|A Chain A, R-State Structure Of Allosteric L-Lactate Dehydrogenase
From Lactobacillus Casei
pdb|2ZQZ|B Chain B, R-State Structure Of Allosteric L-Lactate Dehydrogenase
From Lactobacillus Casei
pdb|2ZQZ|C Chain C, R-State Structure Of Allosteric L-Lactate Dehydrogenase
From Lactobacillus Casei
pdb|2ZQZ|D Chain D, R-State Structure Of Allosteric L-Lactate Dehydrogenase
From Lactobacillus Casei
pdb|2ZQZ|E Chain E, R-State Structure Of Allosteric L-Lactate Dehydrogenase
From Lactobacillus Casei
pdb|2ZQZ|F Chain F, R-State Structure Of Allosteric L-Lactate Dehydrogenase
From Lactobacillus Casei
pdb|3VKV|A Chain A, Complex Structure Of Lactobacillus Casei Lactate
Dehydrogenase With Fructose-1,6-Bisphosphate
pdb|3VKV|B Chain B, Complex Structure Of Lactobacillus Casei Lactate
Dehydrogenase With Fructose-1,6-Bisphosphate
pdb|3VKV|C Chain C, Complex Structure Of Lactobacillus Casei Lactate
Dehydrogenase With Fructose-1,6-Bisphosphate
pdb|3VKV|D Chain D, Complex Structure Of Lactobacillus Casei Lactate
Dehydrogenase With Fructose-1,6-Bisphosphate
pdb|3VKV|E Chain E, Complex Structure Of Lactobacillus Casei Lactate
Dehydrogenase With Fructose-1,6-Bisphosphate
pdb|3VKV|F Chain F, Complex Structure Of Lactobacillus Casei Lactate
Dehydrogenase With Fructose-1,6-Bisphosphate
Length = 326
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 198/309 (64%), Gaps = 9/309 (2%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG 237
QK+ +VG G VG + Y+++ QGI ++D +D+ KG+ +DL + PF SPK
Sbjct: 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPF-TSPKKIYS 68
Query: 238 SDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297
++ + ++ + +V+ITAG GETRL LV++N+KI K ++ I + I L+ +NPV
Sbjct: 69 AEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128
Query: 298 DVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPV 357
D+LTY +WKLSGFPKNRV+GSGT+LD+ RFR +A+ + + SVH +I+GEHGD+ PV
Sbjct: 129 DILTYATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPV 188
Query: 358 WSGVNVAGVTLKEL---NPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVA 414
WS N+ GVT+ E +P I ++ V++ DV ++AYE+IKLKG T + + ++A
Sbjct: 189 WSHANIGGVTIAEWVKAHPEIKEDK----LVKMFEDVRDAAYEIIKLKGATFYGIATALA 244
Query: 415 SISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLR 474
IS +LN+ N + +S + G +G+ ++++ P V+ NG+ +I+ LT E E ++
Sbjct: 245 RISKAILNDENAVLPLSVYMDGQYGL-NDIYIGTPAVINRNGIQNILEIPLTDHEEESMQ 303
Query: 475 KSAATISQI 483
KSA+ + ++
Sbjct: 304 KSASQLKKV 312
>pdb|1LLC|A Chain A, Structure Determination Of The Allosteric L-Lactate
Dehydrogenase From Lactobacillus Casei At 3.0 Angstroms
Resolution
Length = 325
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 198/309 (64%), Gaps = 9/309 (2%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG 237
QK+ +VG G VG + ++++ QGI ++D +D+ KG+ +DL + PF SPK
Sbjct: 9 QKVILVGDGAVGSSYAFAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPF-TSPKKIYS 67
Query: 238 SDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297
++ + ++ + +V+ITAG GETRL LV++N+KI K ++ I + I L+ +NPV
Sbjct: 68 AEYSDAKDADLVVITAGAPKQPGETRLDLVNKNLKILKSIVDPIVDSGFNLIFLVAANPV 127
Query: 298 DVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPV 357
D+LTY +WKLSGFPKNRV+GSGT+LD+ RFR +A+ + + SVH +I+GEHGD+ PV
Sbjct: 128 DILTYATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPV 187
Query: 358 WSGVNVAGVTLKEL---NPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVA 414
WS N+ GVT+ E +P I ++ V++ DV ++AYE+IKLKG T + + ++A
Sbjct: 188 WSHANIGGVTIAEWVKAHPEIKEDK----LVKMFEDVRDAAYEIIKLKGATFYGIATALA 243
Query: 415 SISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLR 474
IS +LN+ N + +S + G +GI ++++ P V+ NG+ +I+ LT E E ++
Sbjct: 244 RISKAILNDENAVLPLSVYMDGQYGI-NDLYIGTPAVINRNGIQNILEIPLTDHEEESMQ 302
Query: 475 KSAATISQI 483
KSA+ + ++
Sbjct: 303 KSASQLKKV 311
>pdb|3PQD|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis Complexed With Fbp And Nad+
pdb|3PQD|B Chain B, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis Complexed With Fbp And Nad+
pdb|3PQD|C Chain C, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis Complexed With Fbp And Nad+
pdb|3PQD|D Chain D, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis Complexed With Fbp And Nad+
pdb|3PQD|E Chain E, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis Complexed With Fbp And Nad+
pdb|3PQD|F Chain F, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis Complexed With Fbp And Nad+
pdb|3PQD|G Chain G, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis Complexed With Fbp And Nad+
pdb|3PQD|H Chain H, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis Complexed With Fbp And Nad+
Length = 326
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 184/308 (59%), Gaps = 2/308 (0%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG 237
K+ ++GAG VG + ++++ QGI +ID N+++ G+++DL HG F P S
Sbjct: 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSY 65
Query: 238 SDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297
+ + IV I AG GETRL+LV++N+KIFK ++ ++ D I L+ +NPV
Sbjct: 66 GTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV 125
Query: 298 DVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPV 357
D+LTY +WK SG PK RVIGSGT LDS RFR +L++ G +P++VH IIGEHGD+ +PV
Sbjct: 126 DILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVHAHIIGEHGDTELPV 185
Query: 358 WSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASIS 417
WS NV GV + EL E ++ DV N+AY +I+ KG T + + +S+A I+
Sbjct: 186 WSHANVGGVPVSELVEK-NDAYKQEELDQIVDDVKNAAYHIIEKKGATYYGVAMSLARIT 244
Query: 418 HTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSA 477
+L+N N I VST + G +G ++V++ +P V+ G+ I NL E E+ SA
Sbjct: 245 KAILHNENSILTVSTYLDGQYG-ADDVYIGVPAVVNRGGIAGITELNLNEKEKEQFLHSA 303
Query: 478 ATISQIQK 485
+ I K
Sbjct: 304 GVLKNILK 311
>pdb|3PQE|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis With H171c Mutation
pdb|3PQE|B Chain B, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis With H171c Mutation
pdb|3PQE|C Chain C, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis With H171c Mutation
pdb|3PQE|D Chain D, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis With H171c Mutation
pdb|3PQF|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis Mutation H171c Complexed With Nad+
pdb|3PQF|B Chain B, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis Mutation H171c Complexed With Nad+
pdb|3PQF|C Chain C, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis Mutation H171c Complexed With Nad+
pdb|3PQF|D Chain D, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus
Subtilis Mutation H171c Complexed With Nad+
Length = 326
Score = 238 bits (607), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 183/308 (59%), Gaps = 2/308 (0%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG 237
K+ ++GAG VG + ++++ QGI +ID N+++ G+++DL HG F P S
Sbjct: 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSY 65
Query: 238 SDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297
+ + IV I AG GETRL+LV++N+KIFK ++ ++ D I L+ +NPV
Sbjct: 66 GTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV 125
Query: 298 DVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPV 357
D+LTY +WK SG PK RVIGSGT LDS RFR +L++ G +P++V IIGEHGD+ +PV
Sbjct: 126 DILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCAHIIGEHGDTELPV 185
Query: 358 WSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASIS 417
WS NV GV + EL E ++ DV N+AY +I+ KG T + + +S+A I+
Sbjct: 186 WSHANVGGVPVSELVEK-NDAYKQEELDQIVDDVKNAAYHIIEKKGATYYGVAMSLARIT 244
Query: 418 HTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSA 477
+L+N N I VST + G +G ++V++ +P V+ G+ I NL E E+ SA
Sbjct: 245 KAILHNENSILTVSTYLDGQYG-ADDVYIGVPAVVNRGGIAGITELNLNEKEKEQFLHSA 303
Query: 478 ATISQIQK 485
+ I K
Sbjct: 304 GVLKNILK 311
>pdb|1LLD|A Chain A, Molecular Basis Of Allosteric Activation Of Bacterial
L-Lactate Dehydrogenase
pdb|1LLD|B Chain B, Molecular Basis Of Allosteric Activation Of Bacterial
L-Lactate Dehydrogenase
pdb|1LTH|T Chain T, T And R States In The Crystals Of Bacterial L-Lactate
Dehydrogenase Reveal The Mechanism For Allosteric
Control
pdb|1LTH|R Chain R, T And R States In The Crystals Of Bacterial L-Lactate
Dehydrogenase Reveal The Mechanism For Allosteric
Control
Length = 319
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 193/305 (63%), Gaps = 2/305 (0%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS 238
K+ V+GAG VG ++ +GI L D ++R + E+LD+QHG+ F + I+
Sbjct: 9 KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD 68
Query: 239 DIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVD 298
D + + +V+ITAG R G++RL+LV V I K ++P + K +P+ I ++I+NPVD
Sbjct: 69 DPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128
Query: 299 VLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVW 358
+ T+++ KL+G P+N++ GSGTNLDS R R L+AQ+ G++ ++VH +I GEHGDS VP+W
Sbjct: 129 IATHVAQKLTGLPENQIFGSGTNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLW 188
Query: 359 SGVNVAGVTLKELNPTIGTEQ-DTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASIS 417
+ GV + + P G + D + +H +V N+AY++I KG T++A+G+S I
Sbjct: 189 ESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYKIINGKGATNYAIGMSGVDII 248
Query: 418 HTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSA 477
+L++TN+I VS++++ HGI ++ +S+P ++ GV + IN ++ E L++SA
Sbjct: 249 EAVLHDTNRILPVSSMLKDFHGI-SDICMSVPTLLNRQGVNNTINTPVSDKELAALKRSA 307
Query: 478 ATISQ 482
T+ +
Sbjct: 308 ETLKE 312
>pdb|4A73|A Chain A, Single Point Mutant Of Thermus Thermophilus Lactate
Dehydrogenase
pdb|4A73|B Chain B, Single Point Mutant Of Thermus Thermophilus Lactate
Dehydrogenase
pdb|4A73|C Chain C, Single Point Mutant Of Thermus Thermophilus Lactate
Dehydrogenase
pdb|4A73|D Chain D, Single Point Mutant Of Thermus Thermophilus Lactate
Dehydrogenase
Length = 310
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 182/306 (59%), Gaps = 6/306 (1%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS 238
K+ +VG+G VG A Y++ G+ L+D + + D+ H PF + +GS
Sbjct: 2 KVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVRAGS 61
Query: 239 --DIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
D+ EG+R V++ AGV GETRLQL+DRN ++F ++P++ + +P+ +LL+ +NP
Sbjct: 62 YGDL---EGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNP 118
Query: 297 VDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVP 356
VDV+T ++++LSG P RV+GSGT LD+ RFR LLA+ L ++P+SVH +++GEHGDS V
Sbjct: 119 VDVMTQVAYRLSGLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYVLGEHGDSEVL 178
Query: 357 VWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASI 416
VWS V GV L E G E+ R+ V +AY +I+ KG T + +G +A +
Sbjct: 179 VWSSAQVGGVPLLEFAEARGAALSPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARL 238
Query: 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKS 476
+L + ++ VS G+ EV LSLP ++ GV + +L+P+E E LR+S
Sbjct: 239 VRAILTDEKGVYTVSAFTPEVEGV-LEVSLSLPRILGAGGVEGTVYPSLSPEEREALRRS 297
Query: 477 AATISQ 482
A + +
Sbjct: 298 AEILKE 303
>pdb|1LDN|A Chain A, Structure Of A Ternary Complex Of An Allosteric Lactate
Dehydrogenase From Bacillus Stearothermophilus At 2.5
Angstroms Resolution
pdb|1LDN|B Chain B, Structure Of A Ternary Complex Of An Allosteric Lactate
Dehydrogenase From Bacillus Stearothermophilus At 2.5
Angstroms Resolution
pdb|1LDN|C Chain C, Structure Of A Ternary Complex Of An Allosteric Lactate
Dehydrogenase From Bacillus Stearothermophilus At 2.5
Angstroms Resolution
pdb|1LDN|D Chain D, Structure Of A Ternary Complex Of An Allosteric Lactate
Dehydrogenase From Bacillus Stearothermophilus At 2.5
Angstroms Resolution
pdb|1LDN|E Chain E, Structure Of A Ternary Complex Of An Allosteric Lactate
Dehydrogenase From Bacillus Stearothermophilus At 2.5
Angstroms Resolution
pdb|1LDN|F Chain F, Structure Of A Ternary Complex Of An Allosteric Lactate
Dehydrogenase From Bacillus Stearothermophilus At 2.5
Angstroms Resolution
pdb|1LDN|G Chain G, Structure Of A Ternary Complex Of An Allosteric Lactate
Dehydrogenase From Bacillus Stearothermophilus At 2.5
Angstroms Resolution
pdb|1LDN|H Chain H, Structure Of A Ternary Complex Of An Allosteric Lactate
Dehydrogenase From Bacillus Stearothermophilus At 2.5
Angstroms Resolution
Length = 316
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 182/305 (59%), Gaps = 2/305 (0%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS 238
++ V+GAG VG + ++++ QGI LID+NE + G+ +D HG F P
Sbjct: 8 RVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHG 67
Query: 239 DIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVD 298
D + +V+I AG GETRL LVD+N+ IF+ ++ + + L+ +NPVD
Sbjct: 68 DYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD 127
Query: 299 VLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVW 358
+LTY +WK SG P RVIGSGT LD+ RFR LL + ++P++VH +IIGEHGD+ +PVW
Sbjct: 128 ILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVW 187
Query: 359 SGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASISH 418
S + + +++L + G E+ ++ R+ +V ++AY++I+ KG T + + + +A ++
Sbjct: 188 SQAYIGVMPIRKLVESKG-EEAQKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTR 246
Query: 419 TLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAA 478
+L+N N I VS + G +G E +V++ +P V+ NG+ +I L DE + SAA
Sbjct: 247 AILHNENAILTVSAYLDGLYG-ERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAA 305
Query: 479 TISQI 483
T+ +
Sbjct: 306 TLKSV 310
>pdb|1LDB|A Chain A, Structure Determination And Refinement Of Bacillus
Stearothermophilus Lactate Dehydrogenase
pdb|1LDB|B Chain B, Structure Determination And Refinement Of Bacillus
Stearothermophilus Lactate Dehydrogenase
pdb|1LDB|C Chain C, Structure Determination And Refinement Of Bacillus
Stearothermophilus Lactate Dehydrogenase
pdb|1LDB|D Chain D, Structure Determination And Refinement Of Bacillus
Stearothermophilus Lactate Dehydrogenase
pdb|2LDB|A Chain A, Structure Determination And Refinement Of Bacillus
Stearothermophilus Lactate Dehydrogenase
pdb|2LDB|B Chain B, Structure Determination And Refinement Of Bacillus
Stearothermophilus Lactate Dehydrogenase
pdb|2LDB|C Chain C, Structure Determination And Refinement Of Bacillus
Stearothermophilus Lactate Dehydrogenase
pdb|2LDB|D Chain D, Structure Determination And Refinement Of Bacillus
Stearothermophilus Lactate Dehydrogenase
Length = 317
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 182/305 (59%), Gaps = 2/305 (0%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS 238
++ V+GAG VG + ++++ QGI LID+NE + G+ +D HG F P
Sbjct: 8 RVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHG 67
Query: 239 DIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVD 298
D + +V+I AG GETRL LVD+N+ IF+ ++ + + L+ +NPVD
Sbjct: 68 DYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD 127
Query: 299 VLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVW 358
+LTY +WK SG P RVIGSGT LD+ RFR LL + ++P++VH +IIGEHGD+ +PVW
Sbjct: 128 ILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVW 187
Query: 359 SGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASISH 418
S + + +++L + G E+ ++ R+ +V ++AY++I+ KG T + + + +A ++
Sbjct: 188 SQAYIGVMPIRKLVESKG-EEAQKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTR 246
Query: 419 TLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAA 478
+L+N N I VS + G +G E +V++ +P V+ NG+ +I L DE + SAA
Sbjct: 247 AILHNENAILTVSAYLDGLYG-ERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAA 305
Query: 479 TISQI 483
T+ +
Sbjct: 306 TLKSV 310
>pdb|2V6M|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Thermus
Thermophilus Hb8 (Apo Form)
pdb|2V6M|B Chain B, Crystal Structure Of Lactate Dehydrogenase From Thermus
Thermophilus Hb8 (Apo Form)
pdb|2V6M|C Chain C, Crystal Structure Of Lactate Dehydrogenase From Thermus
Thermophilus Hb8 (Apo Form)
pdb|2V6M|D Chain D, Crystal Structure Of Lactate Dehydrogenase From Thermus
Thermophilus Hb8 (Apo Form)
pdb|2V7P|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Thermus
Thermophilus Hb8 (Holo Form)
pdb|2V7P|B Chain B, Crystal Structure Of Lactate Dehydrogenase From Thermus
Thermophilus Hb8 (Holo Form)
pdb|2V7P|C Chain C, Crystal Structure Of Lactate Dehydrogenase From Thermus
Thermophilus Hb8 (Holo Form)
pdb|2V7P|D Chain D, Crystal Structure Of Lactate Dehydrogenase From Thermus
Thermophilus Hb8 (Holo Form)
Length = 310
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 182/306 (59%), Gaps = 6/306 (1%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS 238
K+ +VG+G VG A Y++ G+ L+D + + D+ H PF + +GS
Sbjct: 2 KVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVRAGS 61
Query: 239 --DIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
D+ EG+R V++ AGV GETRLQL+DRN ++F ++P++ + +P+ +LL+ +NP
Sbjct: 62 YGDL---EGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNP 118
Query: 297 VDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVP 356
VDV+T ++++LSG P RV+GSGT LD+ RFR LLA+ L ++P+SVH +++GEHGDS V
Sbjct: 119 VDVMTQVAYRLSGLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYVLGEHGDSEVL 178
Query: 357 VWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASI 416
VWS V GV L E G E+ R+ V +AY +I+ KG T + +G +A +
Sbjct: 179 VWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARL 238
Query: 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKS 476
+L + ++ VS G+ EV LSLP ++ GV + +L+P+E E LR+S
Sbjct: 239 VRAILTDEKGVYTVSAFTPEVEGV-LEVSLSLPRILGAGGVEGTVYPSLSPEEREALRRS 297
Query: 477 AATISQ 482
A + +
Sbjct: 298 AEILKE 303
>pdb|1Y6J|A Chain A, L-Lactate Dehydrogenase From Clostridium Thermocellum
Cth-1135
Length = 318
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 191/308 (62%), Gaps = 8/308 (2%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS 238
K+ ++GAG VG + +++ + + LID +++ GE +D+ HG PF+ + +G
Sbjct: 9 KVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG- 67
Query: 239 DIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVD 298
D + + ++++TAG GETRL L +NV I K++ I K ++L++SNPVD
Sbjct: 68 DYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVD 127
Query: 299 VLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVW 358
++TY+ K SG P +VIGSGT LDS+RFR LL++KLG+ ++VHG+IIGEHGDS +P+W
Sbjct: 128 IITYMIQKWSGLPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHGDSQLPLW 187
Query: 359 SGVNVAGVTLKEL--NPTIG-TEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVAS 415
S ++AG + E +P TE+D + ++ DV + +IK KG T + + +S+ +
Sbjct: 188 SCTHIAGKNINEYIDDPKCNFTEEDKK---KIAEDVKTAGATIIKNKGATYYGIAVSINT 244
Query: 416 ISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRK 475
I TLL N N I V T+I G +GI E+V +SLP ++ GV ++ NLTP+E E LR
Sbjct: 245 IVETLLKNQNTIRTVGTVINGMYGI-EDVAISLPSIVNSEGVQEVLQFNLTPEEEEALRF 303
Query: 476 SAATISQI 483
SA + ++
Sbjct: 304 SAEQVKKV 311
>pdb|2XXB|A Chain A, Penta-Mutant Of Thermus Thermophilus Lactate
Dehydrogenase, Complex With Amp
pdb|2XXB|B Chain B, Penta-Mutant Of Thermus Thermophilus Lactate
Dehydrogenase, Complex With Amp
pdb|2XXJ|A Chain A, Penta Mutant Of Lactate Dehydrogenase From Thermus
Thermophilus, Ternary Complex
pdb|2XXJ|B Chain B, Penta Mutant Of Lactate Dehydrogenase From Thermus
Thermophilus, Ternary Complex
pdb|2XXJ|C Chain C, Penta Mutant Of Lactate Dehydrogenase From Thermus
Thermophilus, Ternary Complex
pdb|2XXJ|D Chain D, Penta Mutant Of Lactate Dehydrogenase From Thermus
Thermophilus, Ternary Complex
pdb|3ZZN|A Chain A, 5-Mutant (R79w, R151a, E279a, E299a,E313a)
Lactate-Dehydrogenase From Thermus Thermophillus
pdb|3ZZN|B Chain B, 5-Mutant (R79w, R151a, E279a, E299a,E313a)
Lactate-Dehydrogenase From Thermus Thermophillus
pdb|3ZZN|C Chain C, 5-Mutant (R79w, R151a, E279a, E299a,E313a)
Lactate-Dehydrogenase From Thermus Thermophillus
pdb|3ZZN|D Chain D, 5-Mutant (R79w, R151a, E279a, E299a,E313a)
Lactate-Dehydrogenase From Thermus Thermophillus
Length = 310
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 180/306 (58%), Gaps = 6/306 (1%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS 238
K+ +VG+G VG A Y++ G+ L+D + + D+ H PF + +GS
Sbjct: 2 KVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGS 61
Query: 239 --DIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
D+ EG+R V++ AGV GETRLQL+DRN ++F ++P++ + +P+ +LL+ +NP
Sbjct: 62 YGDL---EGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNP 118
Query: 297 VDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVP 356
VDV+T +++ LSG P RV+GSGT LD+ RFR LLA+ L ++P+SVH +++GEHGDS V
Sbjct: 119 VDVMTQVAYALSGLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYVLGEHGDSEVL 178
Query: 357 VWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASI 416
VWS V GV L E G E+ R+ V +AY +I+ KG T + +G +A +
Sbjct: 179 VWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARL 238
Query: 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKS 476
+L + ++ VS G+ EV LSLP ++ GV + +L+P+E LR+S
Sbjct: 239 VRAILTDEKGVYTVSAFTPEVAGV-LEVSLSLPRILGAGGVAGTVYPSLSPEERAALRRS 297
Query: 477 AATISQ 482
A + +
Sbjct: 298 AEILKE 303
>pdb|3H3J|A Chain A, Crystal Structure Of Lactate Dehydrogenase Mutant (A85r)
Fro Staphylococcus Aureus Complexed With Nad And
Pyruvate
pdb|3H3J|B Chain B, Crystal Structure Of Lactate Dehydrogenase Mutant (A85r)
Fro Staphylococcus Aureus Complexed With Nad And
Pyruvate
Length = 317
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 190/311 (61%), Gaps = 15/311 (4%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSP---KIE 235
K+ ++G G VG + +S++ Q I +ID + ++ +G+++DL+H P+ SP +++
Sbjct: 8 KVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPY--SPTTVRVK 65
Query: 236 SGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295
+G + + + +V+I AG R GETRL LV +N+KIFK ++ ++ D I L+ +N
Sbjct: 66 AG-EYSDCHDADLVVICAGARQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATN 124
Query: 296 PVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSV 355
PVD+L Y +WK SG PK RVIGSGT LDS RFR+LL++ ++P SV IIGEHGD+ +
Sbjct: 125 PVDILAYATWKFSGLPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQIIGEHGDTEL 184
Query: 356 PVWSGVNVAGVTLK---ELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLS 412
PVWS N+AG LK E P G Q + FV+ ++AY++I+ KG T + + +
Sbjct: 185 PVWSHANIAGQPLKTLLEQRPE-GKAQIEQIFVQTR----DAAYDIIQAKGATYYGVAMG 239
Query: 413 VASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEK 472
+A I+ + N + + VS L++G + EE+V++ +P V+ NG+ +++ L +E K
Sbjct: 240 LARITEAIFRNEDAVLTVSALLEGEYE-EEDVYIGVPAVINRNGIRNVVEIPLNDEEQSK 298
Query: 473 LRKSAATISQI 483
SA T+ I
Sbjct: 299 FAHSAKTLKDI 309
>pdb|1EZ4|A Chain A, Crystal Structure Of Non-Allosteric L-Lactate
Dehydrogenase From Lactobacillus Pentosus At 2.3
Angstrom Resolution
pdb|1EZ4|B Chain B, Crystal Structure Of Non-Allosteric L-Lactate
Dehydrogenase From Lactobacillus Pentosus At 2.3
Angstrom Resolution
pdb|1EZ4|C Chain C, Crystal Structure Of Non-Allosteric L-Lactate
Dehydrogenase From Lactobacillus Pentosus At 2.3
Angstrom Resolution
pdb|1EZ4|D Chain D, Crystal Structure Of Non-Allosteric L-Lactate
Dehydrogenase From Lactobacillus Pentosus At 2.3
Angstrom Resolution
Length = 318
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 179/306 (58%), Gaps = 4/306 (1%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG 237
QK+ +VG G VG + +++ QGI F ++D +DR KG+ LDL+ F KI SG
Sbjct: 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSG 65
Query: 238 SDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297
+ + + + +V+ITAG GE+RL LV++N+ I ++ + D I L+ +NPV
Sbjct: 66 -EYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124
Query: 298 DVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPV 357
D+LTY +WK SGFPK RVIGSGT+LDS R RV L ++ + P SV +I+GEHGDS
Sbjct: 125 DILTYATWKFSGFPKERVIGSGTSLDSSRLRVALGKQFNVDPRSVDAYIMGEHGDSEFAA 184
Query: 358 WSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASIS 417
+S + ++++ G D + +L V N AY++I LKG T + +G ++ IS
Sbjct: 185 YSTATIGTRPVRDVAKEQGVSDD--DLAKLEDGVRNKAYDIINLKGATFYGIGTALMRIS 242
Query: 418 HTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSA 477
+L + N + V + G +G+ ++++ P ++ G+ II L+ DE +K++ SA
Sbjct: 243 KAILRDENAVLPVGAYMDGQYGL-NDIYIGTPAIIGGTGLKQIIESPLSADELKKMQDSA 301
Query: 478 ATISQI 483
AT+ ++
Sbjct: 302 ATLKKV 307
>pdb|3D0O|A Chain A, Crystal Structure Of Lactate Dehydrogenase From
Staphylococcus Aureus
pdb|3D0O|B Chain B, Crystal Structure Of Lactate Dehydrogenase From
Staphylococcus Aureus
pdb|3D4P|A Chain A, Crystal Structure Of Lactate Dehydrogenase From
Staphylococcus Aureus Complexed With Nad And Pyruvate
pdb|3D4P|B Chain B, Crystal Structure Of Lactate Dehydrogenase From
Staphylococcus Aureus Complexed With Nad And Pyruvate
Length = 317
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 189/311 (60%), Gaps = 15/311 (4%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSP---KIE 235
K+ ++G G VG + +S++ Q I +ID + ++ +G+++DL+H P+ SP +++
Sbjct: 8 KVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPY--SPTTVRVK 65
Query: 236 SGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295
+G + + + +V+I AG GETRL LV +N+KIFK ++ ++ D I L+ +N
Sbjct: 66 AG-EYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATN 124
Query: 296 PVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSV 355
PVD+L Y +WK SG PK RVIGSGT LDS RFR+LL++ ++P SV IIGEHGD+ +
Sbjct: 125 PVDILAYATWKFSGLPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQIIGEHGDTEL 184
Query: 356 PVWSGVNVAGVTLK---ELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLS 412
PVWS N+AG LK E P G Q + FV+ ++AY++I+ KG T + + +
Sbjct: 185 PVWSHANIAGQPLKTLLEQRPE-GKAQIEQIFVQTR----DAAYDIIQAKGATYYGVAMG 239
Query: 413 VASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEK 472
+A I+ + N + + VS L++G + EE+V++ +P V+ NG+ +++ L +E K
Sbjct: 240 LARITEAIFRNEDAVLTVSALLEGEYE-EEDVYIGVPAVINRNGIRNVVEIPLNDEEQSK 298
Query: 473 LRKSAATISQI 483
SA T+ I
Sbjct: 299 FAHSAKTLKDI 309
>pdb|1A5Z|A Chain A, Lactate Dehydrogenase From Thermotoga Maritima (tmldh)
Length = 319
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 187/302 (61%), Gaps = 3/302 (0%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS 238
KI +VG G+VG + +++L +G LID ++ R +G+ LDL HG PF R I +G
Sbjct: 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG- 60
Query: 239 DIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVD 298
D A +GS +VI+ AGV GETRLQL+ RN ++ K++ ++K +PD I+++++NPVD
Sbjct: 61 DYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120
Query: 299 VLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVW 358
VLTY K SG +V GSGT LD+ R R L+AQ G SP SVH ++IGEHGDS VPVW
Sbjct: 121 VLTYFFLKESGMDPRKVFGSGTVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGDSEVPVW 180
Query: 359 SGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASISH 418
SG + G+ L+ + + + D++ +AYE+I+ KG T +A+ L+VA I
Sbjct: 181 SGAMIGGIPLQNM-CQVCQKCDSKILENFAEKTKRAAYEIIERKGATHYAIALAVADIVE 239
Query: 419 TLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAA 478
++ + ++ +S ++ + G+ +++ +S+P + +GV I+ NL +E E RKSA+
Sbjct: 240 SIFFDEKRVLTLSVYLEDYLGV-KDLCISVPVTLGKHGVERILELNLNEEELEAFRKSAS 298
Query: 479 TI 480
+
Sbjct: 299 IL 300
>pdb|2E37|A Chain A, Structure Of Tt0471 Protein From Thermus Thermophilus
pdb|2E37|B Chain B, Structure Of Tt0471 Protein From Thermus Thermophilus
pdb|2E37|C Chain C, Structure Of Tt0471 Protein From Thermus Thermophilus
pdb|2E37|D Chain D, Structure Of Tt0471 Protein From Thermus Thermophilus
pdb|2E37|E Chain E, Structure Of Tt0471 Protein From Thermus Thermophilus
pdb|2E37|F Chain F, Structure Of Tt0471 Protein From Thermus Thermophilus
pdb|2E37|G Chain G, Structure Of Tt0471 Protein From Thermus Thermophilus
pdb|2E37|H Chain H, Structure Of Tt0471 Protein From Thermus Thermophilus
Length = 310
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 172/294 (58%), Gaps = 6/294 (2%)
Query: 191 ACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS--DIAMSEGSRI 248
A Y++ G+ L+D + + D+ H PF + +GS D+ EG+R
Sbjct: 14 ATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVRAGSYGDL---EGARA 70
Query: 249 VIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLS 308
V++ AGV GETRLQL+DRN ++F ++P++ + +P+ +LL+ +NPVDV T ++++LS
Sbjct: 71 VVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVXTQVAYRLS 130
Query: 309 GFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTL 368
G P RV+GSGT LD+ RFR LLA+ L ++P+SVH +++GEHGDS V VWS V GV L
Sbjct: 131 GLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPL 190
Query: 369 KELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASISHTLLNNTNKIH 428
E G E+ R+ V +AY +I+ KG T + +G +A + +L + ++
Sbjct: 191 LEFAEARGRALSPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVY 250
Query: 429 AVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQ 482
VS G+ EV LSLP ++ GV + +L+P+E E LR+SA + +
Sbjct: 251 TVSAFTPEVEGV-LEVSLSLPRILGAGGVEGTVYPSLSPEEREALRRSAEILKE 303
>pdb|2I6T|A Chain A, Orthorhombic Structure Of The Ldh Domain Of Human
Ubiquitin- Conjugating Enzyme E2-Like Isoform A
pdb|2I6T|B Chain B, Orthorhombic Structure Of The Ldh Domain Of Human
Ubiquitin- Conjugating Enzyme E2-Like Isoform A
pdb|3DL2|A Chain A, Hexagonal Structure Of The Ldh Domain Of Human Ubiquitin-
Conjugating Enzyme E2-Like Isoform A
pdb|3DL2|B Chain B, Hexagonal Structure Of The Ldh Domain Of Human Ubiquitin-
Conjugating Enzyme E2-Like Isoform A
Length = 303
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/314 (37%), Positives = 178/314 (56%), Gaps = 33/314 (10%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS 238
KITVVG G++G+ACT +I +GI L+D +E KG +DL+ P +E
Sbjct: 16 KITVVGGGELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLE----IFNLPNVEISK 70
Query: 239 DIAMSEGSRIVIITAGVRSL-VGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297
D++ S S++VI T V SL ++ L +V NV +F+ L+P + S +LL+ S PV
Sbjct: 71 DLSASAHSKVVIFT--VNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPV 128
Query: 298 DVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPV 357
+++TY++WKLS FP NRVIG G NLDS R + ++ L ++IGE G+ V
Sbjct: 129 EIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLT 188
Query: 358 WSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVV---NSAYEVIKLKGYTSWALGLSVA 414
WSG + V H V N A E++++KG SW++GLSVA
Sbjct: 189 WSG---------------------QEEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVA 227
Query: 415 SISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEA-EKL 473
+ +++NN K+H+VS L +G++ I EVFLSLPC++ NGV+ +I L D EKL
Sbjct: 228 DMVDSIVNNKKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKL 287
Query: 474 RKSAATISQIQKGL 487
+ SA++I +Q+ L
Sbjct: 288 QSSASSIHSLQQQL 301
>pdb|2V6B|A Chain A, Crystal Structure Of Lactate Dehydrogenase From
Deinococcus Radiodurans (Apo Form)
pdb|2V6B|B Chain B, Crystal Structure Of Lactate Dehydrogenase From
Deinococcus Radiodurans (Apo Form)
pdb|2V6B|C Chain C, Crystal Structure Of Lactate Dehydrogenase From
Deinococcus Radiodurans (Apo Form)
pdb|2V6B|D Chain D, Crystal Structure Of Lactate Dehydrogenase From
Deinococcus Radiodurans (Apo Form)
Length = 304
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 167/296 (56%), Gaps = 8/296 (2%)
Query: 192 CTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVII 251
++++ +G S L+D +EDR + E D+ H AP ++ G +++ +++VI+
Sbjct: 15 AAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELAD-AQVVIL 73
Query: 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFP 311
TAG GE+RL L+++N IF++L+P+I + +PD +LL+ SNPVD+LT ++ +L+ P
Sbjct: 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLA--P 131
Query: 312 KNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKEL 371
VIGSGT LDS RFR L+AQ G+ HG+++GEHGDS V WS VAG+ + +
Sbjct: 132 GQPVIGSGTVLDSARFRHLMAQHAGVDGTHAHGYVLGEHGDSEVLAWSSAMVAGMPVADF 191
Query: 372 NPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASISHTLLNNTNKIHAVS 431
+ + ++ N+A +I+ K T + +G ++A I+ +L + + VS
Sbjct: 192 MQAQNLPWNEQVRAKIDEGTRNAAASIIEGKRATYYGIGAALARITEAVLRDRRAVLTVS 251
Query: 432 TLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487
E V LSLP V+ GV ++ LT DE +KL +SA + ++ L
Sbjct: 252 APTP-----EYGVSLSLPRVVGRQGVLSTLHPKLTGDEQQKLEQSAGVLRGFKQQL 302
>pdb|2D4A|A Chain A, Structure Of The Malate Dehydrogenase From Aeropyrum
Pernix
pdb|2D4A|B Chain B, Structure Of The Malate Dehydrogenase From Aeropyrum
Pernix
pdb|2D4A|C Chain C, Structure Of The Malate Dehydrogenase From Aeropyrum
Pernix
pdb|2D4A|D Chain D, Structure Of The Malate Dehydrogenase From Aeropyrum
Pernix
Length = 308
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 173/321 (53%), Gaps = 33/321 (10%)
Query: 180 ITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD 239
IT++GAG+VGMA ++ +G Y + LI + +GE LDL H A E G D
Sbjct: 2 ITILGAGKVGMATAVMLMMRG-YDDLLLIARTPGKPQGEALDLAHAAA-------ELGVD 53
Query: 240 IAMS--------EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILL 291
I +S GS IV++TAG+ G TR QL++ N DL KI + D I++
Sbjct: 54 IRISGSNSYEDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVV 113
Query: 292 IISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHG 351
I +NPVD +TY+ +K +GFP+ RVIG LDS R ++QKLG+S +SV+ ++G HG
Sbjct: 114 ITTNPVDAMTYVMYKKTGFPRERVIGFSGILDSARMAYYISQKLGVSFKSVNAIVLGMHG 173
Query: 352 DSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTS----- 406
PV +V GV L+ L ++++ E V ++ VN+ ++ +L+GY+S
Sbjct: 174 QKMFPVPRLSSVGGVPLEHLM----SKEEIEEVV---SETVNAGAKITELRGYSSNYGPA 226
Query: 407 WALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLT 466
L L+V +I ++ +I+ S +QG +G ++ +P V+ +G+ II LT
Sbjct: 227 AGLVLTVEAIKR----DSKRIYPYSLYLQGEYGY-NDIVAEVPAVIGKSGIERIIELPLT 281
Query: 467 PDEAEKLRKSAATISQIQKGL 487
DE K ++ + ++ + L
Sbjct: 282 EDEKRKFDEAVQAVKKLVETL 302
>pdb|2X0I|A Chain A, 2.9 A Resolution Structure Of Malate Dehydrogenase From
Archaeoglobus Fulgidus In Complex With Nadh
pdb|2X0J|A Chain A, 2.8 A Resolution Structure Of Malate Dehydrogenase From
Archaeoglobus Fulgidus In Complex With Etheno-Nad
Length = 294
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 161/305 (52%), Gaps = 20/305 (6%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL-RSPKIESG 237
K+ VGAG+VG ++ L L+D ED GE +DL H A + + PKI G
Sbjct: 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG 61
Query: 238 SDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297
+D ++ +GS I+++TAG+ G TRL L +N I KD+ KI + +P+ +L+++NP+
Sbjct: 62 ADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121
Query: 298 DVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPV 357
DV+TYI WK SG P+N V G G LDS R + L + +IIGEHGDS
Sbjct: 122 DVMTYIMWKESGKPRNEVFGMGNQLDSQRLKERLYNAGARNIR--RAWIIGEHGDSMFVA 179
Query: 358 WSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASIS 417
S L + + + E EN VR A EVIK KG T + +++ +
Sbjct: 180 KS--------LADFDGEVDWEA-VENDVRF------VAAEVIKRKGATIFGPAVAIYRMV 224
Query: 418 HTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSA 477
++ +T +I S ++QG +GI E V + +P + NG + + L+ +E EKLR SA
Sbjct: 225 KAVVEDTGEIIPTSMILQGEYGI-ENVAVGVPAKLGKNG-AEVADIKLSDEEIEKLRNSA 282
Query: 478 ATISQ 482
+ +
Sbjct: 283 KILRE 287
>pdb|3TL2|A Chain A, Crystal Structure Of Bacillus Anthracis Str. Ames Malate
Dehydrogenase In Closed Conformation
Length = 315
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 166/314 (52%), Gaps = 10/314 (3%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLID--SNEDRCKGEMLDLQHGAPFL-RSPKI 234
+K++V+GAG G A T +L Q ++ L+D E+ KG+ LD+ +P I
Sbjct: 9 KKVSVIGAGFTG-ATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANI 67
Query: 235 ESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294
SD A + S +V+ITAG+ G +R LV N KI K + IAK SP+ I+++++
Sbjct: 68 IGTSDYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT 127
Query: 295 NPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSS 354
NPVD +TY +K +GFPK RVIG LD+ RFR +AQ+L LS + + GF++G HGD
Sbjct: 128 NPVDAMTYSVFKEAGFPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGFVLGGHGDDM 187
Query: 355 VPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVA 414
VP+ G+ L+ L P E E + ++V + G +A S+
Sbjct: 188 VPLVRYSYAGGIPLETLIPKERLEAIVERTRKGGGEIVG-----LLGNGSAYYAPAASLV 242
Query: 415 SISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLR 474
++ +L + ++ ++G +G +++L +P ++ NG+ II L DE E L
Sbjct: 243 EMTEAILKDQRRVLPAIAYLEGEYGY-SDLYLGVPVILGGNGIEKIIELELLADEKEALD 301
Query: 475 KSAATISQIQKGLL 488
+S ++ + K L+
Sbjct: 302 RSVESVRNVMKVLV 315
>pdb|1GV1|A Chain A, Structural Basis For Thermophilic Protein Stability:
Structures Of Thermophilic And Mesophilic Malate
Dehydrogenases
pdb|1GV1|B Chain B, Structural Basis For Thermophilic Protein Stability:
Structures Of Thermophilic And Mesophilic Malate
Dehydrogenases
pdb|1GV1|C Chain C, Structural Basis For Thermophilic Protein Stability:
Structures Of Thermophilic And Mesophilic Malate
Dehydrogenases
pdb|1GV1|D Chain D, Structural Basis For Thermophilic Protein Stability:
Structures Of Thermophilic And Mesophilic Malate
Dehydrogenases
Length = 310
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 165/308 (53%), Gaps = 11/308 (3%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF-LRSPKIES 236
KITV+GAG VG + I + + L+D E +G+ LD+ P L KI
Sbjct: 1 MKITVIGAGNVGATTAFRIADKKLARELVLLDVVEGIPQGKGLDMYETGPVGLFDTKITG 60
Query: 237 GSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
+D A + S IVIITAG+ G TR L+ +N I K++ I K S + I++++SNP
Sbjct: 61 SNDYADTADSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120
Query: 297 VDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVP 356
+D++T+++W SG PK RVIG LD+ RFR +A +LG+S + ++ ++G HGD+ VP
Sbjct: 121 LDIMTHVAWVRSGLPKERVIGMAGVLDAARFRSFIAMELGVSMQDINACVLGGHGDAMVP 180
Query: 357 VWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIK--LKGYTSWALGLSVA 414
V VAG+ + +L P E +L N E+++ +G +A SV
Sbjct: 181 VVKYTTVAGIPISDLLP-------AETIDKLVERTRNGGAEIVEHLKQGSAFYAPASSVV 233
Query: 415 SISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLR 474
+ +++ + ++ + ++G +GI ++ F+ +P + NGV I NL + + L+
Sbjct: 234 EMVESIVLDRKRVLPCAVGLEGQYGI-DKTFVGVPVKLGRNGVEQIYEINLDQADLDLLQ 292
Query: 475 KSAATISQ 482
KSA + +
Sbjct: 293 KSAKIVDE 300
>pdb|1GUZ|A Chain A, Structural Basis For Thermophilic Protein Stability:
Structures Of Thermophilic And Mesophilic Malate
Dehydrogenases
pdb|1GUZ|B Chain B, Structural Basis For Thermophilic Protein Stability:
Structures Of Thermophilic And Mesophilic Malate
Dehydrogenases
pdb|1GUZ|C Chain C, Structural Basis For Thermophilic Protein Stability:
Structures Of Thermophilic And Mesophilic Malate
Dehydrogenases
pdb|1GUZ|D Chain D, Structural Basis For Thermophilic Protein Stability:
Structures Of Thermophilic And Mesophilic Malate
Dehydrogenases
Length = 310
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 165/307 (53%), Gaps = 11/307 (3%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF-LRSPKIESG 237
KITV+GAG VG + + + + L+D E +G+ LD+ P L K+
Sbjct: 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS 61
Query: 238 SDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297
+D A + S IVIITAG+ G TR L+ +N I K++ I K S + I++++SNP+
Sbjct: 62 NDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121
Query: 298 DVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPV 357
D++T+++W SG PK RVIG LD+ RFR +A +LG+S + ++ ++G HGD+ VPV
Sbjct: 122 DIMTHVAWVRSGLPKERVIGMAGVLDAARFRSFIAMELGVSMQDINACVLGGHGDAMVPV 181
Query: 358 WSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIK--LKGYTSWALGLSVAS 415
VAG+ + +L P E +L N E+++ +G +A SV
Sbjct: 182 VKYTTVAGIPISDLLP-------AETIDKLVERTRNGGAEIVEHLKQGSAFYAPASSVVE 234
Query: 416 ISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRK 475
+ +++ + ++ + ++G +GI ++ F+ +P + NGV I NL + + L+K
Sbjct: 235 MVESIVLDRKRVLPCAVGLEGQYGI-DKTFVGVPVKLGRNGVEQIYEINLDQADLDLLQK 293
Query: 476 SAATISQ 482
SA + +
Sbjct: 294 SAKIVDE 300
>pdb|1GV0|A Chain A, Structural Basis For Thermophilic Protein Stability:
Structures Of Thermophilic And Mesophilic Malate
Dehydrogenases
pdb|1GV0|B Chain B, Structural Basis For Thermophilic Protein Stability:
Structures Of Thermophilic And Mesophilic Malate
Dehydrogenases
Length = 310
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 164/308 (53%), Gaps = 13/308 (4%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF-LRSPKIESG 237
KITV+GAG VG + + + + L+D E +G+ LD+ P L K+
Sbjct: 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS 61
Query: 238 SDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297
+D A + S IV+ITAG+ G TR L+ N I +++ +I + S + I++++SNP+
Sbjct: 62 NDYADTANSDIVVITAGLPRKPGMTREDLLSMNAGIVREVTGRIMEHSKNPIIVVVSNPL 121
Query: 298 DVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPV 357
D++T+++W+ SG PK RVIG LDS RFR +A +LG+S + V ++G HGD+ VPV
Sbjct: 122 DIMTHVAWQKSGLPKERVIGMAGVLDSARFRSFIAMELGVSMQDVTACVLGGHGDAMVPV 181
Query: 358 WSGVNVAGVTLKELNPTIGTEQDTENFVRLH---ADVVNSAYEVIKLKGYTSWALGLSVA 414
VAG+ + +L I E+ E R A++VN + G ++ SV
Sbjct: 182 VKYTTVAGIPVADL---ISAERIAELVERTRTGGAEIVNHLKQ-----GSAFYSPATSVV 233
Query: 415 SISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLR 474
+ +++ + ++ + + G +GI + F+ +P + NGV HI L + + L+
Sbjct: 234 EMVESIVLDRKRVLTCAVSLDGQYGI-DGTFVGVPVKLGKNGVEHIYEIKLDQSDLDLLQ 292
Query: 475 KSAATISQ 482
KSA + +
Sbjct: 293 KSAKIVDE 300
>pdb|3NEP|X Chain X, 1.55a Resolution Structure Of Malate Dehydrogenase From
Salinibacter Ruber
Length = 314
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 161/304 (52%), Gaps = 10/304 (3%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL-RSPKIESG 237
K+TV+GAG VG + Q + ++D + +G+ LD++ +P ++
Sbjct: 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT 61
Query: 238 SDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297
+D +E S + IITAG+ G +R L+ +N +I + + +GSPD +++++NP+
Sbjct: 62 NDYGPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121
Query: 298 DVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPV 357
DV+TY++++ SGFP NRV+G LD+ RFR +A++L +S V ++G HGD+ VP+
Sbjct: 122 DVMTYVAYEASGFPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQALLMGGHGDTMVPL 181
Query: 358 WSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYT-SWALGLSVASI 416
V G+ + +L E+ E + E++ L G + +A G + A +
Sbjct: 182 PRYTTVGGIPVPQLIDDARIEEIVER-------TKGAGGEIVDLMGTSAWYAPGAAAAEM 234
Query: 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKS 476
+ +L + +I + G +G+ +++F+ +P + GV +I +L DE +L+ S
Sbjct: 235 TEAILKDNKRILPCAAYCDGEYGL-DDLFIGVPVKLGAGGVEEVIEVDLDADEKAQLKTS 293
Query: 477 AATI 480
A +
Sbjct: 294 AGHV 297
>pdb|2HLP|A Chain A, Crystal Structure Of The E267r Mutant Of A Halophilic
Malate Dehydrogenase In The Apo Form
pdb|2HLP|B Chain B, Crystal Structure Of The E267r Mutant Of A Halophilic
Malate Dehydrogenase In The Apo Form
Length = 303
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 22/298 (7%)
Query: 194 YSILTQGIYSNFCLID--SNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVII 251
Y+I + I +D ED G+ D HG + + ++ G + GS +V+I
Sbjct: 18 YNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG-YEDTAGSDVVVI 76
Query: 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFP 311
TAG+ G+TR+ L N I +D+ + + + D I L SNPVD+L ++
Sbjct: 77 TAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRS 136
Query: 312 KNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKEL 371
+ +VIG G LDS RFR +L+++ ++V G I+GEHGD+ VPV+S V V G
Sbjct: 137 REQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTILGEHGDAQVPVFSKVRVDGT----- 191
Query: 372 NPTI-GTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASISHTLLNNTNKIHAV 430
+P G E++ +L D+ SA +VI+ KG T W VA + +L++T ++
Sbjct: 192 DPEFSGDEKE-----QLLGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGRVLPA 246
Query: 431 STLIQGHHGIEEEVFLSLPCVMADNGVTHII-------NQNLTPDEAEKLRKSAATIS 481
S ++G G E+ F +P + NGV I+ Q+L D AEKL IS
Sbjct: 247 SVKLEGEFGHEDTAF-GVPVRLGSNGVEEIVEWDLDDYEQDLMADAAEKLSDQYDKIS 303
>pdb|1O6Z|A Chain A, 1.95 A Resolution Structure Of (r207s,r292s) Mutant Of
Malate Dehydrogenase From The Halophilic Archaeon
Haloarcula Marismortui (holo Form)
pdb|1O6Z|B Chain B, 1.95 A Resolution Structure Of (r207s,r292s) Mutant Of
Malate Dehydrogenase From The Halophilic Archaeon
Haloarcula Marismortui (holo Form)
pdb|1O6Z|C Chain C, 1.95 A Resolution Structure Of (r207s,r292s) Mutant Of
Malate Dehydrogenase From The Halophilic Archaeon
Haloarcula Marismortui (holo Form)
pdb|1O6Z|D Chain D, 1.95 A Resolution Structure Of (r207s,r292s) Mutant Of
Malate Dehydrogenase From The Halophilic Archaeon
Haloarcula Marismortui (holo Form)
Length = 303
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 22/298 (7%)
Query: 194 YSILTQGIYSNFCLID--SNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVII 251
Y+I + I +D ED G+ D HG + + ++ G + GS +V+I
Sbjct: 18 YNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG-YEDTAGSDVVVI 76
Query: 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFP 311
TAG+ G+TR+ L N I +D+ + + + D I L SNPVD+L ++
Sbjct: 77 TAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRS 136
Query: 312 KNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKEL 371
+ +VIG G LDS RFR +L+++ ++V G I+GEHGD+ VPV+S V+V G
Sbjct: 137 REQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTILGEHGDAQVPVFSKVSVDGT----- 191
Query: 372 NPTI-GTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASISHTLLNNTNKIHAV 430
+P G E++ +L D+ SA +VI+ KG T W VA + +L++T ++
Sbjct: 192 DPEFSGDEKE-----QLLGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLPA 246
Query: 431 STLIQGHHGIEEEVFLSLPCVMADNGVTHII-------NQNLTPDEAEKLRKSAATIS 481
S ++G G E+ F +P + NGV I+ Q+L D AEKL IS
Sbjct: 247 SVKLEGEFGHEDTAF-GVPVSLGSNGVEEIVEWDLDDYEQDLMADAAEKLSDQYDKIS 303
>pdb|2X0R|A Chain A, R207s,R292s Mutant Of Malate Dehydrogenase From The
Halophilic Archaeon Haloarcula Marismortui (Holo Form)
pdb|2X0R|B Chain B, R207s,R292s Mutant Of Malate Dehydrogenase From The
Halophilic Archaeon Haloarcula Marismortui (Holo Form)
Length = 304
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 22/298 (7%)
Query: 194 YSILTQGIYSNFCLID--SNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVII 251
Y+I + I +D ED G+ D HG + + ++ G + GS +V+I
Sbjct: 19 YNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG-YEDTAGSDVVVI 77
Query: 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFP 311
TAG+ G+TR+ L N I +D+ + + + D I L SNPVD+L ++
Sbjct: 78 TAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRS 137
Query: 312 KNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKEL 371
+ +VIG G LDS RFR +L+++ ++V G I+GEHGD+ VPV+S V+V G
Sbjct: 138 REQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTILGEHGDAQVPVFSKVSVDGT----- 192
Query: 372 NPTI-GTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASISHTLLNNTNKIHAV 430
+P G E++ +L D+ SA +VI+ KG T W VA + +L++T ++
Sbjct: 193 DPEFSGDEKE-----QLLGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLPA 247
Query: 431 STLIQGHHGIEEEVFLSLPCVMADNGVTHII-------NQNLTPDEAEKLRKSAATIS 481
S ++G G E+ F +P + NGV I+ Q+L D AEKL IS
Sbjct: 248 SVKLEGEFGHEDTAF-GVPVSLGSNGVEEIVEWDLDDYEQDLMADAAEKLSDQYDKIS 304
>pdb|1HLP|A Chain A, Structural Features Stabilizing Halophilic Malate
Dehydrogenase From An Archaebacterium
pdb|1HLP|B Chain B, Structural Features Stabilizing Halophilic Malate
Dehydrogenase From An Archaebacterium
pdb|1D3A|A Chain A, Crystal Structure Of The Wild Type Halophilic Malate
Dehydrogenase In The Apo Form
pdb|1D3A|B Chain B, Crystal Structure Of The Wild Type Halophilic Malate
Dehydrogenase In The Apo Form
Length = 303
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 22/298 (7%)
Query: 194 YSILTQGIYSNFCLID--SNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVII 251
Y+I + I +D ED G+ D HG + + ++ G + GS +V+I
Sbjct: 18 YNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG-YEDTAGSDVVVI 76
Query: 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFP 311
TAG+ G+TR+ L N I +D+ + + + D I L SNPVD+L ++
Sbjct: 77 TAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRS 136
Query: 312 KNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKEL 371
+ +VIG G LDS RFR +L+++ ++V G I+GEHGD+ VPV+S V V G
Sbjct: 137 REQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTILGEHGDAQVPVFSKVRVDGT----- 191
Query: 372 NPTI-GTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASISHTLLNNTNKIHAV 430
+P G E++ +L D+ SA +VI+ KG T W VA + +L++T ++
Sbjct: 192 DPEFSGDEKE-----QLLGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLPA 246
Query: 431 STLIQGHHGIEEEVFLSLPCVMADNGVTHII-------NQNLTPDEAEKLRKSAATIS 481
S ++G G E+ F +P + NGV I+ Q+L D AEKL IS
Sbjct: 247 SVKLEGEFGHEDTAF-GVPVRLGSNGVEEIVEWDLDDYEQDLMADAAEKLSDQYDKIS 303
>pdb|2J5K|A Chain A, 2.0 A Resolution Structure Of The Wild Type Malate
Dehydrogenase From Haloarcula Marismortui (radiation
Damage Series)
pdb|2J5K|B Chain B, 2.0 A Resolution Structure Of The Wild Type Malate
Dehydrogenase From Haloarcula Marismortui (radiation
Damage Series)
pdb|2J5K|C Chain C, 2.0 A Resolution Structure Of The Wild Type Malate
Dehydrogenase From Haloarcula Marismortui (radiation
Damage Series)
pdb|2J5K|D Chain D, 2.0 A Resolution Structure Of The Wild Type Malate
Dehydrogenase From Haloarcula Marismortui (radiation
Damage Series)
pdb|2J5Q|A Chain A, 2.15 A Resolution Structure Of The Wild Type Malate
Dehydrogenase From Haloarcula Marismortui After First
Radiation Burn (Radiation Damage Series)
pdb|2J5Q|B Chain B, 2.15 A Resolution Structure Of The Wild Type Malate
Dehydrogenase From Haloarcula Marismortui After First
Radiation Burn (Radiation Damage Series)
pdb|2J5Q|C Chain C, 2.15 A Resolution Structure Of The Wild Type Malate
Dehydrogenase From Haloarcula Marismortui After First
Radiation Burn (Radiation Damage Series)
pdb|2J5Q|D Chain D, 2.15 A Resolution Structure Of The Wild Type Malate
Dehydrogenase From Haloarcula Marismortui After First
Radiation Burn (Radiation Damage Series)
pdb|2J5R|A Chain A, 2.25 A Resolution Structure Of The Wild Type Malate
Dehydrogenase From Haloarcula Marismortui After Second
Radiation Burn (Radiation Damage Series)
pdb|2J5R|B Chain B, 2.25 A Resolution Structure Of The Wild Type Malate
Dehydrogenase From Haloarcula Marismortui After Second
Radiation Burn (Radiation Damage Series)
pdb|2J5R|C Chain C, 2.25 A Resolution Structure Of The Wild Type Malate
Dehydrogenase From Haloarcula Marismortui After Second
Radiation Burn (Radiation Damage Series)
pdb|2J5R|D Chain D, 2.25 A Resolution Structure Of The Wild Type Malate
Dehydrogenase From Haloarcula Marismortui After Second
Radiation Burn (Radiation Damage Series)
Length = 304
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 22/298 (7%)
Query: 194 YSILTQGIYSNFCLID--SNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVII 251
Y+I + I +D ED G+ D HG + + ++ G + GS +V+I
Sbjct: 19 YNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG-YEDTAGSDVVVI 77
Query: 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFP 311
TAG+ G+TR+ L N I +D+ + + + D I L SNPVD+L ++
Sbjct: 78 TAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRS 137
Query: 312 KNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKEL 371
+ +VIG G LDS RFR +L+++ ++V G I+GEHGD+ VPV+S V V G
Sbjct: 138 REQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTILGEHGDAQVPVFSKVRVDGT----- 192
Query: 372 NPTI-GTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASISHTLLNNTNKIHAV 430
+P G E++ +L D+ SA +VI+ KG T W VA + +L++T ++
Sbjct: 193 DPEFSGDEKE-----QLLGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLPA 247
Query: 431 STLIQGHHGIEEEVFLSLPCVMADNGVTHII-------NQNLTPDEAEKLRKSAATIS 481
S ++G G E+ F +P + NGV I+ Q+L D AEKL IS
Sbjct: 248 SVKLEGEFGHEDTAF-GVPVRLGSNGVEEIVEWDLDDYEQDLMADAAEKLSDQYDKIS 304
>pdb|3GVH|A Chain A, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM
Brucella Melitensis
pdb|3GVH|B Chain B, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM
Brucella Melitensis
pdb|3GVH|C Chain C, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM
Brucella Melitensis
pdb|3GVH|D Chain D, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM
Brucella Melitensis
pdb|3GVI|A Chain A, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM
Brucella Melitensis In Complex With Adp
pdb|3GVI|B Chain B, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM
Brucella Melitensis In Complex With Adp
pdb|3GVI|C Chain C, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM
Brucella Melitensis In Complex With Adp
pdb|3GVI|D Chain D, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM
Brucella Melitensis In Complex With Adp
pdb|3GVI|E Chain E, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM
Brucella Melitensis In Complex With Adp
pdb|3GVI|F Chain F, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM
Brucella Melitensis In Complex With Adp
Length = 324
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 161/308 (52%), Gaps = 7/308 (2%)
Query: 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF-LRSPKIESG 237
KI ++G+G +G + + + + L D E +G+ LD+ +P K
Sbjct: 9 KIALIGSGMIGGTLAHLAGLKEL-GDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA 67
Query: 238 SDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297
+D A EG+ +VI+TAGV G +R L+ N+K+ + + I K +P+ ++ I+NP+
Sbjct: 68 NDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127
Query: 298 DVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPV 357
D + + K SG P ++V+G LDS RFR L+++ +S E V F++G HGDS VP+
Sbjct: 128 DAMVWALQKFSGLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVTVFVLGGHGDSMVPL 187
Query: 358 WSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKL--KGYTSWALGLSVAS 415
VAG+ L +L T QD + ++ + E++ L G +A S
Sbjct: 188 ARYSTVAGIPLPDLVKMGWTSQDKLD--KIIQRTRDGGAEIVGLLKTGSAFYAPAASAIQ 245
Query: 416 ISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRK 475
++ + L + ++ V+ + G +G+ +++++ +P V+ NGV II +L DE + K
Sbjct: 246 MAESYLKDKKRVLPVAAQLSGQYGV-KDMYVGVPTVIGANGVERIIEIDLDKDEKAQFDK 304
Query: 476 SAATISQI 483
S A+++ +
Sbjct: 305 SVASVAGL 312
>pdb|1HYG|A Chain A, Crystal Structure Of Mj0490 Gene Product, The Family Of
LactateMALATE DEHYDROGENASE
pdb|1HYG|B Chain B, Crystal Structure Of Mj0490 Gene Product, The Family Of
LactateMALATE DEHYDROGENASE
pdb|1HYE|A Chain A, Crystal Structure Of The Mj0490 Gene Product, The Family
Of LactateMALATE DEHYDROGENASE, DIMERIC STRUCTURE
Length = 313
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 161/315 (51%), Gaps = 22/315 (6%)
Query: 179 KITVVGA-GQVGMACTYSILTQGIYSNFCLI--DSNEDRCKGEMLDLQHGAPFLRSPK-- 233
K+T++GA G+VG A + + + LI + + ++ +G D+ RS
Sbjct: 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANI 61
Query: 234 -IESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLI 292
+ES ++ + + S +VIIT+GV G +R+ L N KI KIA+ D + +
Sbjct: 62 YVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAE-ICDTKIFV 120
Query: 293 ISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGD 352
I+NPVDV+TY + S F +N+V G GT+LDS+RF+V +A+ G+ + V IIGEHGD
Sbjct: 121 ITNPVDVMTYKALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTRIIGEHGD 180
Query: 353 SSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLH-----ADVVNSAYEVIKLKGYTSW 407
S VP+ S ++ G+ + Q E F L DV ++I+LKG + +
Sbjct: 181 SMVPLLSATSIGGIPI----------QKFERFKELPIDEIIEDVKTKGEQIIRLKGGSEF 230
Query: 408 ALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTP 467
++ ++ ++NN ++ +S + G +V + +P + +G+ +++ L
Sbjct: 231 GPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVSIELDK 290
Query: 468 DEAEKLRKSAATISQ 482
DE RKSA I +
Sbjct: 291 DEIIAFRKSAEIIKK 305
>pdb|1CET|A Chain A, Chloroquine Binds In The Cofactor Binding Site Of
Plasmodium Falciparum Lactate Dehydrogenase.
pdb|1LDG|A Chain A, Plasmodium Falciparum L-lactate Dehydrogenase Complexed
With Nadh And Oxamate
Length = 316
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 161/321 (50%), Gaps = 20/321 (6%)
Query: 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKI 234
+P KI +VG+G +G +++ Q + L D ++ G+ LD H S
Sbjct: 2 APKAKIVLVGSGMIG-GVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK 60
Query: 235 ESGS----DIAMSEGSRIVIITAGVRSLVGET-----RLQLVDRNVKIFKDLIPKIAKGS 285
SGS D+A GS +VI+TAG G++ RL L+ N KI ++ I K
Sbjct: 61 VSGSNTYDDLA---GSDVVIVTAGFTKAPGKSDKEWNRLDLLPLNNKIMIEIGGHIKKNC 117
Query: 286 PDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGF 345
P+ +++++NPVDV+ + + SG PKN++IG G LD+ R + ++QKL + P V+
Sbjct: 118 PNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAH 177
Query: 346 IIGEHGDSSVPVWSGVNVAGVTLKEL--NPTIGTEQDTENFVRLHADVVNSAYEVIKLKG 403
I+G HG+ V + + V G+ L+E N I + F R VN+A E++ L
Sbjct: 178 IVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDR----TVNTALEIVNLHA 233
Query: 404 YTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQ 463
A ++ ++ + L + K+ STL++G +G ++F P V+ NGV +I
Sbjct: 234 SPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYG-HSDIFGGTPVVLGANGVEQVIEL 292
Query: 464 NLTPDEAEKLRKSAATISQIQ 484
L +E K ++ A +++
Sbjct: 293 QLNSEEKAKFDEAIAETKRMK 313
>pdb|2HJR|A Chain A, Crystal Structure Of Cryptosporidium Parvum Malate
Dehydrogenase
pdb|2HJR|B Chain B, Crystal Structure Of Cryptosporidium Parvum Malate
Dehydrogenase
pdb|2HJR|C Chain C, Crystal Structure Of Cryptosporidium Parvum Malate
Dehydrogenase
pdb|2HJR|D Chain D, Crystal Structure Of Cryptosporidium Parvum Malate
Dehydrogenase
pdb|2HJR|E Chain E, Crystal Structure Of Cryptosporidium Parvum Malate
Dehydrogenase
pdb|2HJR|F Chain F, Crystal Structure Of Cryptosporidium Parvum Malate
Dehydrogenase
pdb|2HJR|G Chain G, Crystal Structure Of Cryptosporidium Parvum Malate
Dehydrogenase
pdb|2HJR|H Chain H, Crystal Structure Of Cryptosporidium Parvum Malate
Dehydrogenase
pdb|2HJR|I Chain I, Crystal Structure Of Cryptosporidium Parvum Malate
Dehydrogenase
pdb|2HJR|J Chain J, Crystal Structure Of Cryptosporidium Parvum Malate
Dehydrogenase
pdb|2HJR|K Chain K, Crystal Structure Of Cryptosporidium Parvum Malate
Dehydrogenase
pdb|2HJR|L Chain L, Crystal Structure Of Cryptosporidium Parvum Malate
Dehydrogenase
Length = 328
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 158/316 (50%), Gaps = 13/316 (4%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSP-KIES 236
+KI+++GAGQ+G +L Q + + D E +G+ LDL H + SP KI
Sbjct: 15 KKISIIGAGQIGSTIAL-LLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG 73
Query: 237 GSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
++ + S +VIITAGV TR L+ N KI + + K P+ ++ I+NP
Sbjct: 74 ENNYEYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNP 133
Query: 297 VDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVP 356
+D + Y + SG P N+V G LDS RFR L++ LG+ P V ++G HGD +P
Sbjct: 134 LDAMVYYFKEKSGIPANKVCGMSGVLDSARFRCNLSRALGVKPSDVSAIVVGGHGDEMIP 193
Query: 357 VWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAY---EVIKL--KGYTSWALGL 411
+ S V + G+ L + EQ +++ + +A+ E+++L G +A
Sbjct: 194 LTSSVTIGGILLSDF-----VEQGKITHSQINEIIKKTAFGGGEIVELLKTGSAFYAPAA 248
Query: 412 SVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAE 471
S +++ L ++ + ST + G + + +F+ +P V+ NG+ ++ NL+ DE
Sbjct: 249 SAVAMAQAYLKDSKSVLVCSTYLTGQYNV-NNLFVGVPVVIGKNGIEDVVIVNLSDDEKS 307
Query: 472 KLRKSAATISQIQKGL 487
KS +I + + L
Sbjct: 308 LFSKSVESIQNLVQDL 323
>pdb|1CEQ|A Chain A, Chloroquine Binds In The Cofactor Binding Site Of
Plasmodium Falciparum Lactate Dehydrogenase
Length = 316
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 160/321 (49%), Gaps = 20/321 (6%)
Query: 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKI 234
+P KI +VG+G +G +++ Q + L D ++ G+ LD H S
Sbjct: 2 APKAKIVLVGSGMIG-GVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK 60
Query: 235 ESGS----DIAMSEGSRIVIITAGVRSLVGET-----RLQLVDRNVKIFKDLIPKIAKGS 285
SGS D+A GS +VI+TAG G++ R L+ N KI ++ I K
Sbjct: 61 VSGSNTYDDLA---GSDVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC 117
Query: 286 PDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGF 345
P+ +++++NPVDV+ + + SG PKN++IG G LD+ R + ++QKL + P V+
Sbjct: 118 PNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAH 177
Query: 346 IIGEHGDSSVPVWSGVNVAGVTLKEL--NPTIGTEQDTENFVRLHADVVNSAYEVIKLKG 403
I+G HG+ V + + V G+ L+E N I + F R VN+A E++ L
Sbjct: 178 IVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDR----TVNTALEIVNLHA 233
Query: 404 YTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQ 463
A ++ ++ + L + K+ STL++G +G ++F P V+ NGV +I
Sbjct: 234 SPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYG-HSDIFGGTPVVLGANGVEQVIEL 292
Query: 464 NLTPDEAEKLRKSAATISQIQ 484
L +E K ++ A +++
Sbjct: 293 QLNSEEKAKFDEAIAETKRMK 313
>pdb|1HYH|A Chain A, Crystal Structure Of L-2-hydroxyisocaproate Dehydrogenase
From Lactobacillus Confusus At 2.2 Angstroms
Resolution-an Example Of Strong Asymmetry Between
Subunits
pdb|1HYH|B Chain B, Crystal Structure Of L-2-hydroxyisocaproate Dehydrogenase
From Lactobacillus Confusus At 2.2 Angstroms
Resolution-an Example Of Strong Asymmetry Between
Subunits
pdb|1HYH|C Chain C, Crystal Structure Of L-2-hydroxyisocaproate Dehydrogenase
From Lactobacillus Confusus At 2.2 Angstroms
Resolution-an Example Of Strong Asymmetry Between
Subunits
pdb|1HYH|D Chain D, Crystal Structure Of L-2-hydroxyisocaproate Dehydrogenase
From Lactobacillus Confusus At 2.2 Angstroms
Resolution-an Example Of Strong Asymmetry Between
Subunits
Length = 309
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 152/312 (48%), Gaps = 20/312 (6%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG 237
+KI ++G G VG A + ++ QG+ ++ ID+NE + K + +D Q L +
Sbjct: 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI 61
Query: 238 SDIAMSEGSRIVIITAGVRSLVGET----RLQLVDRNVKIFKDLIPKIAKGSPDCILLII 293
+D A + +VI T G L + R + + + + + + +L++I
Sbjct: 62 NDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI 121
Query: 294 SNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDS 353
SNPVDV+T + ++GFP ++VIG+GT LD+ R + + + L P SV G+ +GEHG+S
Sbjct: 122 SNPVDVITALFQHVTGFPAHKVIGTGTLLDTARMQRAVGEAFDLDPRSVSGYNLGEHGNS 181
Query: 354 SVPVWSGVNVAG---VTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALG 410
WS V V G VTL + + + + + V+ KGYTS+ +
Sbjct: 182 QFVAWSTVRVMGQPIVTLADAGDI--------DLAAIEEEARKGGFTVLNGKGYTSYGVA 233
Query: 411 LSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEA 470
S I+ ++ + + + L+ + + ++LS P ++ +GV +LT DE
Sbjct: 234 TSAIRIAKAVMADAH-----AELVVSNRRDDMGMYLSYPAIIGRDGVLAETTLDLTTDEQ 288
Query: 471 EKLRKSAATISQ 482
EKL +S I Q
Sbjct: 289 EKLLQSRDYIQQ 300
>pdb|1T24|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
Nad+ And 4- Hydroxy-1,2,5-Oxadiazole-3-Carboxylic Acid
pdb|1T25|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
Nadh And 3- Hydroxyisoxazole-4-Carboxylic Acid
pdb|1T26|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
Nadh And 4- Hydroxy-1,2,5-Thiadiazole-3-Carboxylic Acid
pdb|1T2C|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
Nadh
pdb|1T2D|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
Nad+ And Oxalate
pdb|2X8L|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Apo Structure
pdb|4B7U|A Chain A, Plasmodium Falciparum L-Lactate Dehydrogenase Complexed
With Bicine
pdb|4B7U|B Chain B, Plasmodium Falciparum L-Lactate Dehydrogenase Complexed
With Bicine
pdb|4B7U|C Chain C, Plasmodium Falciparum L-Lactate Dehydrogenase Complexed
With Bicine
pdb|4B7U|D Chain D, Plasmodium Falciparum L-Lactate Dehydrogenase Complexed
With Bicine
Length = 322
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 160/321 (49%), Gaps = 20/321 (6%)
Query: 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKI 234
+P KI +VG+G +G +++ Q + L D ++ G+ LD H S
Sbjct: 2 APKAKIVLVGSGMIG-GVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK 60
Query: 235 ESGS----DIAMSEGSRIVIITAGVRSLVGET-----RLQLVDRNVKIFKDLIPKIAKGS 285
SGS D+A G+ +VI+TAG G++ R L+ N KI ++ I K
Sbjct: 61 VSGSNTYDDLA---GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC 117
Query: 286 PDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGF 345
P+ +++++NPVDV+ + + SG PKN++IG G LD+ R + ++QKL + P V+
Sbjct: 118 PNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAH 177
Query: 346 IIGEHGDSSVPVWSGVNVAGVTLKEL--NPTIGTEQDTENFVRLHADVVNSAYEVIKLKG 403
I+G HG+ V + + V G+ L+E N I + F R VN+A E++ L
Sbjct: 178 IVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDR----TVNTALEIVNLHA 233
Query: 404 YTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQ 463
A ++ ++ + L + K+ STL++G +G ++F P V+ NGV +I
Sbjct: 234 SPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYG-HSDIFGGTPVVLGANGVEQVIEL 292
Query: 464 NLTPDEAEKLRKSAATISQIQ 484
L +E K ++ A +++
Sbjct: 293 QLNSEEKAKFDEAIAETKRMK 313
>pdb|1XIV|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
2-({4-
Chloro-[hydroxy(Methoxy)methyl]cyclohexyl}amino)ethane-
1,1,2-Triol
Length = 323
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 160/321 (49%), Gaps = 20/321 (6%)
Query: 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKI 234
+P KI +VG+G +G +++ Q + L D ++ G+ LD H S
Sbjct: 1 APKAKIVLVGSGMIG-GVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK 59
Query: 235 ESGS----DIAMSEGSRIVIITAGVRSLVGET-----RLQLVDRNVKIFKDLIPKIAKGS 285
SGS D+A G+ +VI+TAG G++ R L+ N KI ++ I K
Sbjct: 60 VSGSNTYDDLA---GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC 116
Query: 286 PDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGF 345
P+ +++++NPVDV+ + + SG PKN++IG G LD+ R + ++QKL + P V+
Sbjct: 117 PNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAH 176
Query: 346 IIGEHGDSSVPVWSGVNVAGVTLKEL--NPTIGTEQDTENFVRLHADVVNSAYEVIKLKG 403
I+G HG+ V + + V G+ L+E N I + F R VN+A E++ L
Sbjct: 177 IVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDR----TVNTALEIVNLHA 232
Query: 404 YTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQ 463
A ++ ++ + L + K+ STL++G +G ++F P V+ NGV +I
Sbjct: 233 SPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYG-HSDIFGGTPVVLGANGVEQVIEL 291
Query: 464 NLTPDEAEKLRKSAATISQIQ 484
L +E K ++ A +++
Sbjct: 292 QLNSEEKAKFDEAIAETKRMK 312
>pdb|1U4O|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
2,6- Naphthalenedicarboxylic Acid
pdb|1U4S|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
2,6- Naphthalenedisulphonic Acid
pdb|1U5A|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
3,5- Dihydroxy-2-Naphthoic Acid
pdb|1U5C|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
3,7- Dihydroxynaphthalene-2-Carboxylic Acid And Nad+
pdb|2A94|A Chain A, Structure Of Plasmodium Falciparum Lactate Dehydrogenase
Complexed To Apadh
Length = 321
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 160/321 (49%), Gaps = 20/321 (6%)
Query: 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKI 234
+P KI +VG+G +G +++ Q + L D ++ G+ LD H S
Sbjct: 1 APKAKIVLVGSGMIG-GVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK 59
Query: 235 ESGS----DIAMSEGSRIVIITAGVRSLVGET-----RLQLVDRNVKIFKDLIPKIAKGS 285
SGS D+A G+ +VI+TAG G++ R L+ N KI ++ I K
Sbjct: 60 VSGSNTYDDLA---GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC 116
Query: 286 PDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGF 345
P+ +++++NPVDV+ + + SG PKN++IG G LD+ R + ++QKL + P V+
Sbjct: 117 PNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAH 176
Query: 346 IIGEHGDSSVPVWSGVNVAGVTLKEL--NPTIGTEQDTENFVRLHADVVNSAYEVIKLKG 403
I+G HG+ V + + V G+ L+E N I + F R VN+A E++ L
Sbjct: 177 IVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDR----TVNTALEIVNLHA 232
Query: 404 YTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQ 463
A ++ ++ + L + K+ STL++G +G ++F P V+ NGV +I
Sbjct: 233 SPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYG-HSDIFGGTPVVLGANGVEQVIEL 291
Query: 464 NLTPDEAEKLRKSAATISQIQ 484
L +E K ++ A +++
Sbjct: 292 QLNSEEKAKFDEAIAETKRMK 312
>pdb|1OC4|A Chain A, Lactate Dehydrogenase From Plasmodium Berghei
pdb|1OC4|B Chain B, Lactate Dehydrogenase From Plasmodium Berghei
Length = 322
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 161/318 (50%), Gaps = 14/318 (4%)
Query: 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKI 234
+P KI +VG+G +G +++ Q + + D ++ G+ LD H S
Sbjct: 2 APKAKIVLVGSGMIG-GVMATLIVQKNLGDVVMFDIVKNMPHGKALDTSHTNVMAYSNCK 60
Query: 235 ESGSDIAMS-EGSRIVIITAGVRSLVGET-----RLQLVDRNVKIFKDLIPKIAKGSPDC 288
SGS+ + + +VI+TAG G++ R L+ N KI ++ I P+
Sbjct: 61 VSGSNTYDDLKDADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKNNCPNA 120
Query: 289 ILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIG 348
+++++NPVDV+ + + SG PKN+++G G LD+ R + ++QKL + P V+ I+G
Sbjct: 121 FIIVVTNPVDVMVQLLHQHSGVPKNKIVGLGGVLDTSRLKYYISQKLNVCPRDVNAHIVG 180
Query: 349 EHGDSSVPVWSGVNVAGVTLKEL--NPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTS 406
HG+ V + + V G+ L+E N I ++ F R +N+A E++ L
Sbjct: 181 AHGNKMVLLKRYITVGGIPLQEFINNKKITDQELDAIFDR----TINTALEIVNLHASPY 236
Query: 407 WALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLT 466
A ++ ++ + + + K+ STL++G +G +++F P V+ NGV +I L
Sbjct: 237 VAPAAAIIEMAESYIRDLRKVLICSTLLEGQYG-HKDIFAGTPLVIGGNGVEQVIELQLN 295
Query: 467 PDEAEKLRKSAATISQIQ 484
DE +K ++ A S+++
Sbjct: 296 ADEKKKFDEAVAETSRMK 313
>pdb|1T2E|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase S245a, A327p
Mutant Complexed With Nadh And Oxamate
Length = 322
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 160/321 (49%), Gaps = 20/321 (6%)
Query: 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKI 234
+P KI +VG+G +G +++ Q + L D ++ G+ LD H S
Sbjct: 2 APKAKIVLVGSGMIG-GVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK 60
Query: 235 ESGS----DIAMSEGSRIVIITAGVRSLVGET-----RLQLVDRNVKIFKDLIPKIAKGS 285
SGS D+A G+ +VI+TAG G++ R L+ N KI ++ I K
Sbjct: 61 VSGSNTYDDLA---GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC 117
Query: 286 PDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGF 345
P+ +++++NPVDV+ + + SG PKN++IG G LD+ R + ++QKL + P V+
Sbjct: 118 PNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAH 177
Query: 346 IIGEHGDSSVPVWSGVNVAGVTLKEL--NPTIGTEQDTENFVRLHADVVNSAYEVIKLKG 403
I+G HG+ V + + V G+ L+E N I + F R VN+A E++ L
Sbjct: 178 IVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDR----TVNTALEIVNLHA 233
Query: 404 YTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQ 463
A ++ ++ + L + K+ STL++G +G ++F P V+ NGV +I
Sbjct: 234 APYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYG-HSDIFGGTPVVLGANGVEQVIEL 292
Query: 464 NLTPDEAEKLRKSAATISQIQ 484
L +E K ++ A +++
Sbjct: 293 QLNSEEKAKFDEAIAETKRMK 313
>pdb|1SOV|A Chain A, Toxoplasma Gondii Bradyzoite-specific Ldh (ldh2) Apo Form
pdb|1SOV|B Chain B, Toxoplasma Gondii Bradyzoite-specific Ldh (ldh2) Apo Form
pdb|1SOW|A Chain A, T. Gondii Bradyzoite-Specific Ldh (Ldh2) In Complex With
Nad And Oxalate
pdb|1SOW|B Chain B, T. Gondii Bradyzoite-Specific Ldh (Ldh2) In Complex With
Nad And Oxalate
Length = 328
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 155/319 (48%), Gaps = 14/319 (4%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSP-KIES 236
+KI ++G+G +G Y + + + ++ L D +G+ LD + + S
Sbjct: 9 KKIAMIGSGMIGGTMGYLCVLREL-ADVVLFDVVTGMPEGKALDDSQATSIADTNVSVTS 67
Query: 237 GSDIAMSEGSRIVIITAGVRSLVGET-----RLQLVDRNVKIFKDLIPKIAKGSPDCILL 291
+ GS +VIITAG+ + G++ R L+ N KI +++ + K P ++
Sbjct: 68 ANQYEKIAGSDVVIITAGLTKVPGKSDKEWSRNDLLPFNAKIIREVAQGVKKYCPLAFVI 127
Query: 292 IISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHG 351
+++NP+D + + SG PKN V G LDS RFR +A +L +SP + +IG HG
Sbjct: 128 VVTNPLDCMVKCFHEASGLPKNMVCGMANVLDSARFRRFIADQLEISPRDIQATVIGTHG 187
Query: 352 DSSVPVWSGVNVAGVTLKELNPTIGTEQDTE-NFVRLHADVVNSAYEVIKLKGYTS--WA 408
D +P+ V V G L+E I + TE + + E+++L G S +A
Sbjct: 188 DHMLPLARYVTVNGFPLREF---IKKGKMTEAKLAEIVERTKKAGGEIVRLLGQGSAYYA 244
Query: 409 LGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPD 468
LS +++ L + ++ S QG +G+ ++F+ LP V+ G+ +I LT +
Sbjct: 245 PALSAITMAQAFLKDEKRVLPCSVYCQGEYGL-HDMFIGLPAVIGGGGIEQVIELELTHE 303
Query: 469 EAEKLRKSAATISQIQKGL 487
E E RKS + ++ K L
Sbjct: 304 EQECFRKSVDDVVELNKSL 322
>pdb|3CZM|A Chain A, T. Gondii Bradyzoite-Specific Ldh (Ldh2) In Complex With
Nad And Oxq
pdb|3CZM|B Chain B, T. Gondii Bradyzoite-Specific Ldh (Ldh2) In Complex With
Nad And Oxq
Length = 326
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 156/322 (48%), Gaps = 14/322 (4%)
Query: 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSP-K 233
S +KI ++G+G +G Y + + + ++ L D +G+ LD +
Sbjct: 6 SRRKKIAMIGSGMIGGTMGYLCVLREL-ADVVLFDVVTGMPEGKALDDSQATSIADTNVS 64
Query: 234 IESGSDIAMSEGSRIVIITAGVRSLVGET-----RLQLVDRNVKIFKDLIPKIAKGSPDC 288
+ S + GS +VIITAG+ + G++ R L+ N KI +++ + K P
Sbjct: 65 VTSANQYEKIAGSDVVIITAGLTKVPGKSDKEWSRNDLLPFNAKIIREVAQGVKKYCPLA 124
Query: 289 ILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIG 348
+++++NP+D + + SG PKN V G LDS RFR +A +L +SP + +IG
Sbjct: 125 FVIVVTNPLDCMVKCFHEASGLPKNMVCGMANVLDSARFRRFIADQLEISPRDIQATVIG 184
Query: 349 EHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTE-NFVRLHADVVNSAYEVIKLKGYTS- 406
HGD +P+ V V G L+E I + TE + + E+++L G S
Sbjct: 185 THGDHMLPLARYVTVNGFPLREF---IKKGKMTEAKLAEIVERTKKAGGEIVRLLGQGSA 241
Query: 407 -WALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNL 465
+A LS +++ L + ++ S QG +G+ ++F+ LP V+ G+ +I L
Sbjct: 242 YYAPALSAITMAQAFLKDEKRVLPCSVYCQGEYGL-HDMFIGLPAVIGGGGIEQVIELEL 300
Query: 466 TPDEAEKLRKSAATISQIQKGL 487
T +E E RKS + ++ K L
Sbjct: 301 THEEQECFRKSVDDVVELNKSL 322
>pdb|2A92|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Plasmodium
Vivax: Complex With Nadh
pdb|2A92|B Chain B, Crystal Structure Of Lactate Dehydrogenase From Plasmodium
Vivax: Complex With Nadh
pdb|2A92|C Chain C, Crystal Structure Of Lactate Dehydrogenase From Plasmodium
Vivax: Complex With Nadh
pdb|2A92|D Chain D, Crystal Structure Of Lactate Dehydrogenase From Plasmodium
Vivax: Complex With Nadh
pdb|2AA3|A Chain A, Crystal Structure Of Plasmodium Vivax Lactate
Dehydrogenase Complex With Apadh
pdb|2AA3|B Chain B, Crystal Structure Of Plasmodium Vivax Lactate
Dehydrogenase Complex With Apadh
pdb|2AA3|C Chain C, Crystal Structure Of Plasmodium Vivax Lactate
Dehydrogenase Complex With Apadh
pdb|2AA3|D Chain D, Crystal Structure Of Plasmodium Vivax Lactate
Dehydrogenase Complex With Apadh
Length = 321
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 158/318 (49%), Gaps = 14/318 (4%)
Query: 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSP-K 233
+P KI +VG+G +G +++ Q + + D ++ +G+ LD H S K
Sbjct: 1 TPKPKIVLVGSGMIG-GVMATLIVQKNLGDVVMFDVVKNMPQGKALDTSHSNVMAYSNCK 59
Query: 234 IESGSDIAMSEGSRIVIITAGVRSLVGET-----RLQLVDRNVKIFKDLIPKIAKGSPDC 288
+ + +G+ +VI+TAG G++ R L+ N KI ++ I P+
Sbjct: 60 VTGSNSYDDLKGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKNLCPNA 119
Query: 289 ILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIG 348
+++++NPVDV+ + ++ SG PKN++IG G LD+ R + ++QKL + P V+ I+G
Sbjct: 120 FIIVVTNPVDVMVQLLFEHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNALIVG 179
Query: 349 EHGDSSVPVWSGVNVAGVTLKEL--NPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTS 406
HG+ V + + V G+ L+E N I E+ F R VN+A E++ L
Sbjct: 180 AHGNKMVLLKRYITVGGIPLQEFINNKKITDEEVEGIFDR----TVNTALEIVNLLASPY 235
Query: 407 WALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLT 466
A ++ ++ + L + K+ STL++G +G +F P V+ GV +I L
Sbjct: 236 VAPAAAIIEMAESYLKDIKKVLVCSTLLEGQYG-HSNIFGGTPLVIGGTGVEQVIELQLN 294
Query: 467 PDEAEKLRKSAATISQIQ 484
+E K ++ A +++
Sbjct: 295 AEEKTKFDEAVAETKRMK 312
>pdb|3P7M|A Chain A, Structure Of Putative Lactate Dehydrogenase From
Francisella Tularensis Subsp. Tularensis Schu S4
pdb|3P7M|B Chain B, Structure Of Putative Lactate Dehydrogenase From
Francisella Tularensis Subsp. Tularensis Schu S4
pdb|3P7M|C Chain C, Structure Of Putative Lactate Dehydrogenase From
Francisella Tularensis Subsp. Tularensis Schu S4
pdb|3P7M|D Chain D, Structure Of Putative Lactate Dehydrogenase From
Francisella Tularensis Subsp. Tularensis Schu S4
Length = 321
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 158/315 (50%), Gaps = 14/315 (4%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSP-KIES 236
+KIT+VGAG +G + L + + + L D + G+ LDL P K+
Sbjct: 6 KKITLVGAGNIGGTLAHLALIKQL-GDVVLFDIAQGXPNGKALDLLQTCPIEGVDFKVRG 64
Query: 237 GSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
+D E S +VI+TAGV G +R L+ N+K+ + + I P+ ++ I+NP
Sbjct: 65 TNDYKDLENSDVVIVTAGVPRKPGXSRDDLLGINIKVXQTVGEGIKHNCPNAFVICITNP 124
Query: 297 VDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVP 356
+D+ K SG P N+++G LDS RFR LA +L +S + V ++ G HGD+ VP
Sbjct: 125 LDIXVNXLQKFSGVPDNKIVGXAGVLDSARFRTFLADELNVSVQQVQAYVXGGHGDTXVP 184
Query: 357 VWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNS---AYEVIKL--KGYTSWALGL 411
+ NVAGV+L++L +Q+ RL A V + E++ L G +A
Sbjct: 185 LTKXSNVAGVSLEQLVKEGKLKQE-----RLDAIVSRTRSGGGEIVALLKTGSAYYAPAA 239
Query: 412 SVASISHTLLNNTNKIHAVSTLIQ-GHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEA 470
+ + + L + I + ++ G +G++E++F+ +P ++ NGV I ++ E
Sbjct: 240 AGIQXAESFLKDKKXILPCAAKVKAGXYGLDEDLFVGVPTEISANGVRP-IEVEISDKER 298
Query: 471 EKLRKSAATISQIQK 485
E+L+ S I + K
Sbjct: 299 EQLQVSINAIKDLNK 313
>pdb|1GUY|A Chain A, Structural Basis For Thermophilic Protein Stability:
Structures Of Thermophilic And Mesophilic Malate
Dehydrogenases
pdb|1GUY|C Chain C, Structural Basis For Thermophilic Protein Stability:
Structures Of Thermophilic And Mesophilic Malate
Dehydrogenases
pdb|1UXG|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric
Malate Dehydrogenase By Single Point Mutations At The
Dimer-Dimer Interface.
pdb|1UXG|B Chain B, Large Improvement In The Thermal Stability Of A Tetrameric
Malate Dehydrogenase By Single Point Mutations At The
Dimer-Dimer Interface
Length = 309
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 156/304 (51%), Gaps = 8/304 (2%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL-RSPKIES 236
+KI+++GAG VG + T L + L+D E +G+ LDL +P ++
Sbjct: 3 KKISIIGAGFVG-STTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG 61
Query: 237 GSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
++ A + S ++++T+G G +R L+ N I + I + A SP+ ++++++NP
Sbjct: 62 TNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNP 121
Query: 297 VDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVP 356
+D +TY++ ++SGFPK RVIG LD+ R+R +A + G+S E V ++G HGD VP
Sbjct: 122 LDAMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGHGDEMVP 181
Query: 357 VWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASI 416
+ ++G+ + E Q E + ++VN ++K G +A + A +
Sbjct: 182 LPRFSTISGIPVSEFIAPDRLAQIVERTRKGGGEIVN----LLK-TGSAYYAPAAATAQM 236
Query: 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKS 476
+L + ++ V+ + G +G+ +++ +P ++ GV I+ L +E L S
Sbjct: 237 VEAVLKDKKRVMPVAAYLTGQYGL-NDIYFGVPVILGAGGVEKILELPLNEEEMALLNAS 295
Query: 477 AATI 480
A +
Sbjct: 296 AKAV 299
>pdb|2FM3|A Chain A, Crystal Structure Of The Lactate Dehydrogenase From
Cryptosporidium Parvum Complexed With Substrate (Pyruvic
Acid) And Cofactor (B- Nicotinamide Adenine
Dinucleotide)
pdb|2FM3|B Chain B, Crystal Structure Of The Lactate Dehydrogenase From
Cryptosporidium Parvum Complexed With Substrate (Pyruvic
Acid) And Cofactor (B- Nicotinamide Adenine
Dinucleotide)
pdb|2FN7|A Chain A, Crystal Structure Of The Lactate Dehydrogenase From
Cryptosporidium Parvum Complexed With Substrate (Lactic
Acid) And Cofactor (B- Nicotinamide Adenine
Dinucleotide)
pdb|2FN7|B Chain B, Crystal Structure Of The Lactate Dehydrogenase From
Cryptosporidium Parvum Complexed With Substrate (Lactic
Acid) And Cofactor (B- Nicotinamide Adenine
Dinucleotide)
pdb|2FNZ|A Chain A, Crystal Structure Of The Lactate Dehydrogenase From
Cryptosporidium Parvum Complexed With Cofactor
(B-Nicotinamide Adenine Dinucleotide) And Inhibitor
(Oxamic Acid)
pdb|2FNZ|B Chain B, Crystal Structure Of The Lactate Dehydrogenase From
Cryptosporidium Parvum Complexed With Cofactor
(B-Nicotinamide Adenine Dinucleotide) And Inhibitor
(Oxamic Acid)
pdb|2FRM|A Chain A, Crystal Structure Of The Lactate Dehydrogenase From
Cryptosporidium Parvum
pdb|2FRM|B Chain B, Crystal Structure Of The Lactate Dehydrogenase From
Cryptosporidium Parvum
pdb|2FRM|C Chain C, Crystal Structure Of The Lactate Dehydrogenase From
Cryptosporidium Parvum
pdb|2FRM|D Chain D, Crystal Structure Of The Lactate Dehydrogenase From
Cryptosporidium Parvum
Length = 321
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 3/311 (0%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHG-APFLRSPKIES 236
+KI V+G+GQ+G Y I+ + ++ L D E +G+ LD+ H F + K+
Sbjct: 5 RKIAVIGSGQIGGNIAY-IVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG 63
Query: 237 GSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
+D A GS +VIITA + + R +L+ N +I + + K P+ ++ I+NP
Sbjct: 64 TNDYADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNP 123
Query: 297 VDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVP 356
+DV+ K+SG P N+V G LDS RFR +AQ G++ V +IG HGD VP
Sbjct: 124 LDVMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQHFGVNASDVSANVIGGHGDGMVP 183
Query: 357 VWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASI 416
S V+V GV L Q+ + + H + G +A + +
Sbjct: 184 ATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVADNLKTGTAYFAPAAAAVKM 243
Query: 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKS 476
+ L + + S H+G+ + +++ +P ++ NGV I+ +LTP E + L +S
Sbjct: 244 AEAYLKDKKAVVPCSAFCSNHYGV-KGIYMGVPTIIGKNGVEDILELDLTPLEQKLLGES 302
Query: 477 AATISQIQKGL 487
++ I K L
Sbjct: 303 INEVNTISKVL 313
>pdb|1UR5|A Chain A, Stabilization Of A Tetrameric Malate Dehydrogenase By
Introduction Of A Disulfide Bridge At The DimerDIMER
Interface
pdb|1UR5|C Chain C, Stabilization Of A Tetrameric Malate Dehydrogenase By
Introduction Of A Disulfide Bridge At The DimerDIMER
Interface
Length = 309
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 156/304 (51%), Gaps = 8/304 (2%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL-RSPKIES 236
+KI+++GAG VG + T L + L+D E +G+ LDL +P ++
Sbjct: 3 KKISIIGAGFVG-STTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG 61
Query: 237 GSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
++ A + S ++++T+G G +R L+ N I + I + A SP+ ++++++NP
Sbjct: 62 TNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNP 121
Query: 297 VDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVP 356
+D +TY++ ++SGFPK RVIG LD+ R+R +A + G+S E V ++G HGD VP
Sbjct: 122 LDAMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGHGDEMVP 181
Query: 357 VWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASI 416
+ ++G+ + E Q E + ++VN ++K G +A + A +
Sbjct: 182 LPRFSCISGIPVSEFIAPDRLAQIVERTRKGGGEIVN----LLK-TGSAYYAPAAATAQM 236
Query: 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKS 476
+L + ++ V+ + G +G+ +++ +P ++ GV I+ L +E L S
Sbjct: 237 VEAVLKDKKRVMPVAAYLTGQYGL-NDIYFGVPVILGAGGVEKILELPLNEEEMALLNAS 295
Query: 477 AATI 480
A +
Sbjct: 296 AKAV 299
>pdb|2EWD|A Chain A, Crystal Structure Of The Lactate Dehydrogenase From
Cryptosporidium Parvum Complexed With Substrate (Pyruvic
Acid) And Cofactor Analog (3-Acetylpyridine Adenine
Dinucleotide).
pdb|2EWD|B Chain B, Crystal Structure Of The Lactate Dehydrogenase From
Cryptosporidium Parvum Complexed With Substrate (Pyruvic
Acid) And Cofactor Analog (3-Acetylpyridine Adenine
Dinucleotide)
Length = 317
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 149/311 (47%), Gaps = 3/311 (0%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHG-APFLRSPKIES 236
+KI V+G+GQ+G Y I+ + ++ L D E +G+ LD+ H F + K+
Sbjct: 5 RKIAVIGSGQIGGNIAY-IVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG 63
Query: 237 GSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
D A GS +VIITA + + R +L+ N +I + + K P+ ++ I+NP
Sbjct: 64 TDDYADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNP 123
Query: 297 VDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVP 356
+DV+ K+SG P N+V G LDS RFR +AQ G++ V +IG HGD VP
Sbjct: 124 LDVMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQHFGVNASDVSANVIGGHGDGMVP 183
Query: 357 VWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASI 416
S V+V GV L Q+ + + H + G +A + +
Sbjct: 184 ATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVADNLKTGTAYFAPAAAAVKM 243
Query: 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKS 476
+ L + + S H+G+ + +++ +P ++ NGV I+ +LTP E + L +S
Sbjct: 244 AEAYLKDKKAVVPCSAFCSNHYGV-KGIYMGVPTIIGKNGVEDILELDLTPLEQKLLGES 302
Query: 477 AATISQIQKGL 487
++ I K L
Sbjct: 303 INEVNTISKVL 313
>pdb|1UXH|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric
Malate Dehydrogenase By Single Point Mutations At The
Dimer-Dimer Interface
pdb|1UXH|B Chain B, Large Improvement In The Thermal Stability Of A Tetrameric
Malate Dehydrogenase By Single Point Mutations At The
Dimer-Dimer Interface
pdb|1UXK|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric
Malate Dehydrogenase By Single Point Mutations At The
Dimer-dimer Interface
pdb|1UXK|C Chain C, Large Improvement In The Thermal Stability Of A Tetrameric
Malate Dehydrogenase By Single Point Mutations At The
Dimer-dimer Interface
Length = 309
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 156/304 (51%), Gaps = 8/304 (2%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL-RSPKIES 236
+KI+++GAG VG + T L + L+D E +G+ LDL +P ++
Sbjct: 3 KKISIIGAGFVG-STTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG 61
Query: 237 GSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
++ A + S ++++T+G G +R L+ N I + I + A SP+ ++++++NP
Sbjct: 62 TNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNP 121
Query: 297 VDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVP 356
+D +TY++ ++SGFPK RVIG LD+ R+R +A + G+S + V ++G HGD VP
Sbjct: 122 LDAMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVQDVQAMLMGGHGDEMVP 181
Query: 357 VWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASI 416
+ ++G+ + E Q E + ++VN ++K G +A + A +
Sbjct: 182 LPRFSTISGIPVSEFIAPDRLAQIVERTRKGGGEIVN----LLK-TGSAYYAPAAATAQM 236
Query: 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKS 476
+L + ++ V+ + G +G+ +++ +P ++ GV I+ L +E L S
Sbjct: 237 VEAVLKDKKRVMPVAAYLTGQYGL-NDIYFGVPVILGAGGVEKILELPLNEEEMALLNAS 295
Query: 477 AATI 480
A +
Sbjct: 296 AKAV 299
>pdb|1UXI|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric
Malate Dehydrogenase By Single Point Mutations At The
Dimer-Dimer Interface
pdb|1UXI|B Chain B, Large Improvement In The Thermal Stability Of A Tetrameric
Malate Dehydrogenase By Single Point Mutations At The
Dimer-Dimer Interface
pdb|1UXJ|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric
Malate Dehydrogenase By Single Point Mutations At The
Dimer-dimer Interface
pdb|1UXJ|C Chain C, Large Improvement In The Thermal Stability Of A Tetrameric
Malate Dehydrogenase By Single Point Mutations At The
Dimer-dimer Interface
Length = 309
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 156/304 (51%), Gaps = 8/304 (2%)
Query: 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL-RSPKIES 236
+KI+++GAG VG + T L + L+D E +G+ LDL +P ++
Sbjct: 3 KKISIIGAGFVG-STTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG 61
Query: 237 GSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
++ A + S ++++T+G G +R L+ N I + I + A SP+ ++++++NP
Sbjct: 62 TNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNP 121
Query: 297 VDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVP 356
+D +TY++ ++SGFPK RVIG LD+ R+R +A + G+S + V ++G HGD VP
Sbjct: 122 LDAMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVP 181
Query: 357 VWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASI 416
+ ++G+ + E Q E + ++VN ++K G +A + A +
Sbjct: 182 LPRFSTISGIPVSEFIAPDRLAQIVERTRKGGGEIVN----LLK-TGSAYYAPAAATAQM 236
Query: 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKS 476
+L + ++ V+ + G +G+ +++ +P ++ GV I+ L +E L S
Sbjct: 237 VEAVLKDKKRVMPVAAYLTGQYGL-NDIYFGVPVILGAGGVEKILELPLNEEEMALLNAS 295
Query: 477 AATI 480
A +
Sbjct: 296 AKAV 299
>pdb|1PZE|A Chain A, T.gondii Ldh1 Apo Form
pdb|1PZF|A Chain A, T.gondii Ldh1 Ternary Complex With Apad+ And Oxalate
pdb|1PZF|B Chain B, T.gondii Ldh1 Ternary Complex With Apad+ And Oxalate
pdb|1PZF|C Chain C, T.gondii Ldh1 Ternary Complex With Apad+ And Oxalate
pdb|1PZF|D Chain D, T.gondii Ldh1 Ternary Complex With Apad+ And Oxalate
pdb|1PZH|A Chain A, T.Gondii Ldh1 Ternary Complex With Nad And Oxalate
pdb|1PZH|B Chain B, T.Gondii Ldh1 Ternary Complex With Nad And Oxalate
pdb|1PZH|C Chain C, T.Gondii Ldh1 Ternary Complex With Nad And Oxalate
pdb|1PZH|D Chain D, T.Gondii Ldh1 Ternary Complex With Nad And Oxalate
Length = 331
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 165/330 (50%), Gaps = 17/330 (5%)
Query: 169 VAPSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF 228
+AP++ +K+ ++G+G +G Y + + ++ L D + +G+ LDL H
Sbjct: 1 MAPALVQRRKKVAMIGSGMIGGTMGYLCALREL-ADVVLYDVVKGMPEGKALDLSHVTSV 59
Query: 229 LR---SPKIESGSDIAMSEGSRIVIITAGVRSLVGE-----TRLQLVDRNVKIFKDLIPK 280
+ S + E + A++ G+ VI+TAG+ + G+ +R L+ N KI +++
Sbjct: 60 VDTNVSVRAEYSYEAALT-GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQN 118
Query: 281 IAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPE 340
I K P +++++NP+D + + + SG P N + G LDS RFR +A L +SP
Sbjct: 119 IKKYCPKTFIIVVTNPLDCMVKVMCEASGVPTNMICGMACMLDSGRFRRYVADALSVSPR 178
Query: 341 SVHGFIIGEHGDSSVPVWSGVNVAGVTL-KELNPTIGTEQDTENFVRLHADVVNSAYEVI 399
V +IG HGD VP+ + V G + K + + TE+ E H V S E++
Sbjct: 179 DVQATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAE-HTKV--SGGEIV 235
Query: 400 KL--KGYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGV 457
+ +G +A S +++ + LN+ ++ S G +G+ +++F+ LP V+ G+
Sbjct: 236 RFLGQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYGL-KDMFIGLPAVIGGAGI 294
Query: 458 THIINQNLTPDEAEKLRKSAATISQIQKGL 487
+I L +E ++ +KS + + K +
Sbjct: 295 ERVIELELNEEEKKQFQKSVDDVMALNKAV 324
>pdb|1PZG|A Chain A, T.Gondii Ldh1 Complexed With Apad And Sulfate At 1.6
Angstroms
pdb|1PZG|B Chain B, T.Gondii Ldh1 Complexed With Apad And Sulfate At 1.6
Angstroms
pdb|1PZG|C Chain C, T.Gondii Ldh1 Complexed With Apad And Sulfate At 1.6
Angstroms
pdb|1PZG|D Chain D, T.Gondii Ldh1 Complexed With Apad And Sulfate At 1.6
Angstroms
Length = 331
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 165/330 (50%), Gaps = 17/330 (5%)
Query: 169 VAPSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF 228
+AP++ +K+ ++G+G +G Y + + ++ L D + +G+ LDL H
Sbjct: 1 MAPALVQRRKKVAMIGSGMIGGTMGYLCALREL-ADVVLYDVVKGMPEGKALDLSHVTSV 59
Query: 229 LR---SPKIESGSDIAMSEGSRIVIITAGVRSLVGE-----TRLQLVDRNVKIFKDLIPK 280
+ S + E + A++ G+ VI+TAG+ + G+ +R L+ N KI +++
Sbjct: 60 VDTNVSVRAEYSYEAALT-GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQN 118
Query: 281 IAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPE 340
I K P +++++NP+D + + + SG P N + G LDS RFR +A L +SP
Sbjct: 119 IKKYCPKTFIIVVTNPLDCMVKVMXEASGVPTNMICGMACMLDSGRFRRYVADALSVSPR 178
Query: 341 SVHGFIIGEHGDSSVPVWSGVNVAGVTL-KELNPTIGTEQDTENFVRLHADVVNSAYEVI 399
V +IG HGD VP+ + V G + K + + TE+ E H V S E++
Sbjct: 179 DVQATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAE-HTKV--SGGEIV 235
Query: 400 KL--KGYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGV 457
+ +G +A S +++ + LN+ ++ S G +G+ +++F+ LP V+ G+
Sbjct: 236 RFLGQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYGL-KDMFIGLPAVIGGAGI 294
Query: 458 THIINQNLTPDEAEKLRKSAATISQIQKGL 487
+I L +E ++ +KS + + K +
Sbjct: 295 ERVIELELNEEEKKQFQKSVDDVMALNKAV 324
>pdb|3OM9|A Chain A, T. Gondii Bradyzoite-Specific Ldh (Ldh1) In Complex With
Nad And Oxq
pdb|3OM9|B Chain B, T. Gondii Bradyzoite-Specific Ldh (Ldh1) In Complex With
Nad And Oxq
pdb|3OM9|C Chain C, T. Gondii Bradyzoite-Specific Ldh (Ldh1) In Complex With
Nad And Oxq
pdb|3OM9|D Chain D, T. Gondii Bradyzoite-Specific Ldh (Ldh1) In Complex With
Nad And Oxq
Length = 329
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 163/328 (49%), Gaps = 17/328 (5%)
Query: 171 PSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLR 230
P++ +K+ ++G+G +G Y + + ++ L D + +G+ LDL H +
Sbjct: 1 PALVQRRKKVAMIGSGMIGGTMGYLCALREL-ADVVLYDVVKGMPEGKALDLSHVTSVVD 59
Query: 231 ---SPKIESGSDIAMSEGSRIVIITAGVRSLVGE-----TRLQLVDRNVKIFKDLIPKIA 282
S + E + A++ G+ VI+TAG+ + G+ +R L+ N KI +++ I
Sbjct: 60 TNVSVRAEYSYEAALT-GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIK 118
Query: 283 KGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESV 342
K P +++++NP+D + + + SG P N + G LDS RFR +A L +SP V
Sbjct: 119 KYCPKTFIIVVTNPLDCMVKVMCEASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDV 178
Query: 343 HGFIIGEHGDSSVPVWSGVNVAGVTL-KELNPTIGTEQDTENFVRLHADVVNSAYEVIKL 401
+IG HGD VP+ + V G + K + + TE+ E H V S E+++
Sbjct: 179 QATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAE-HTKV--SGGEIVRF 235
Query: 402 --KGYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTH 459
+G +A S +++ + LN+ ++ S G +G+ +++F+ LP V+ G+
Sbjct: 236 LGQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYGL-KDMFIGLPAVIGGAGIER 294
Query: 460 IINQNLTPDEAEKLRKSAATISQIQKGL 487
+I L +E ++ +KS + + K +
Sbjct: 295 VIELELNEEEKKQFQKSVDDVMALNKAV 322
>pdb|1EMD|A Chain A, Crystal Structure Of A Ternary Complex Of Escherichia Coli
Malate Dehydrogenase, Citrate And Nad At 1.9 Angstroms
Resolution
pdb|2CMD|A Chain A, The Crystal Structure Of E.Coli Malate Dehydrogenase: A
Complex Of The Apoenzyme And Citrate At 1.87 Angstroms
Resolution
Length = 312
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 59/330 (17%)
Query: 179 KITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG 237
K+ V+GA G +G A + TQ + + G +DL H P K SG
Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSH-IPTAVKIKGFSG 60
Query: 238 SDIAMS-EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
D + EG+ +V+I+AGVR G R L + N I K+L+ ++AK P + II+NP
Sbjct: 61 EDATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120
Query: 297 VDVLTYIS---WKLSG-FPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEH-G 351
V+ I+ K +G + KN++ G T LD +R +A+ G P V +IG H G
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFGV-TTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSG 179
Query: 352 DSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK---GYTSWA 408
+ +P+ S V GV+ TEQ+ + + + N+ EV++ K G + +
Sbjct: 180 VTILPLLS--QVPGVSF--------TEQEVADLTK---RIQNAGTEVVEAKAGGGSATLS 226
Query: 409 LGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEE----------EVFLSLPCVMADNGVT 458
+G + A +L+ +QG G+ E F S P ++ NGV
Sbjct: 227 MGQAAARFGLSLVRA----------LQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVE 276
Query: 459 HIINQNLTPDEAEKLRKSAATISQIQKGLL 488
RKS T+S ++ L
Sbjct: 277 E--------------RKSIGTLSAFEQNAL 292
>pdb|2PWZ|A Chain A, Crystal Structure Of The Apo Form Of E.Coli Malate
Dehydrogenase
pdb|2PWZ|C Chain C, Crystal Structure Of The Apo Form Of E.Coli Malate
Dehydrogenase
pdb|2PWZ|E Chain E, Crystal Structure Of The Apo Form Of E.Coli Malate
Dehydrogenase
pdb|2PWZ|G Chain G, Crystal Structure Of The Apo Form Of E.Coli Malate
Dehydrogenase
pdb|3HHP|A Chain A, Malate Dehydrogenase Open Conformation
pdb|3HHP|B Chain B, Malate Dehydrogenase Open Conformation
pdb|3HHP|C Chain C, Malate Dehydrogenase Open Conformation
pdb|3HHP|D Chain D, Malate Dehydrogenase Open Conformation
Length = 312
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 143/330 (43%), Gaps = 59/330 (17%)
Query: 179 KITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG 237
K+ V+GA G +G A + TQ + + G +DL H P K SG
Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSH-IPTAVKIKGFSG 60
Query: 238 SDIAMS-EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
D + EG+ +V+I+AGV G R L + N I K+L+ ++AK P + II+NP
Sbjct: 61 EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120
Query: 297 VDVLTYIS---WKLSG-FPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEH-G 351
V+ I+ K +G + KN++ G T LD +R +A+ G P V +IG H G
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFGV-TTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSG 179
Query: 352 DSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK---GYTSWA 408
+ +P+ S V GV+ TEQ+ + + + N+ EV++ K G + +
Sbjct: 180 VTILPLLS--QVPGVSF--------TEQEVADLTK---RIQNAGTEVVEAKAGGGSATLS 226
Query: 409 LGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEV----------FLSLPCVMADNGVT 458
+G + A +L+ +QG G+ E F S P ++ NGV
Sbjct: 227 MGQAAARFGLSLVRA----------LQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVE 276
Query: 459 HIINQNLTPDEAEKLRKSAATISQIQKGLL 488
RKS T+S ++ L
Sbjct: 277 E--------------RKSIGTLSAFEQNAL 292
>pdb|1IB6|A Chain A, Crystal Structure Of R153c E. Coli Malate Dehydrogenase
pdb|1IB6|B Chain B, Crystal Structure Of R153c E. Coli Malate Dehydrogenase
pdb|1IB6|C Chain C, Crystal Structure Of R153c E. Coli Malate Dehydrogenase
pdb|1IB6|D Chain D, Crystal Structure Of R153c E. Coli Malate Dehydrogenase
pdb|1IE3|A Chain A, Crystal Structure Of R153c E. Coli Malate Dehydrogenase
pdb|1IE3|B Chain B, Crystal Structure Of R153c E. Coli Malate Dehydrogenase
pdb|1IE3|C Chain C, Crystal Structure Of R153c E. Coli Malate Dehydrogenase
pdb|1IE3|D Chain D, Crystal Structure Of R153c E. Coli Malate Dehydrogenase
Length = 312
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 142/330 (43%), Gaps = 59/330 (17%)
Query: 179 KITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG 237
K+ V+GA G +G A + TQ + + G +DL H P K SG
Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSH-IPTAVKIKGFSG 60
Query: 238 SDIAMS-EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296
D + EG+ +V+I+AGV G R L + N I K+L+ ++AK P + II+NP
Sbjct: 61 EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120
Query: 297 VDVLTYIS---WKLSG-FPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEH-G 351
V+ I+ K +G + KN++ G T LD + +A+ G P V +IG H G
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFGV-TTLDIICSNTFVAELKGKQPGEVEVPVIGGHSG 179
Query: 352 DSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK---GYTSWA 408
+ +P+ S V GV+ TEQ+ + + + N+ EV++ K G + +
Sbjct: 180 VTILPLLS--QVPGVSF--------TEQEVADLTK---RIQNAGTEVVEAKAGGGSATLS 226
Query: 409 LGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEV----------FLSLPCVMADNGVT 458
+G + A +L+ +QG G+ E F S P ++ NGV
Sbjct: 227 MGQAAARFGLSLVRA----------LQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVE 276
Query: 459 HIINQNLTPDEAEKLRKSAATISQIQKGLL 488
RKS T+S ++ L
Sbjct: 277 E--------------RKSIGTLSAFEQNAL 292
>pdb|4E0B|A Chain A, 2.17 Angstrom Resolution Crystal Structure Of Malate
Dehydrogenase From Vibrio Vulnificus Cmcp6
pdb|4E0B|B Chain B, 2.17 Angstrom Resolution Crystal Structure Of Malate
Dehydrogenase From Vibrio Vulnificus Cmcp6
pdb|4E0B|C Chain C, 2.17 Angstrom Resolution Crystal Structure Of Malate
Dehydrogenase From Vibrio Vulnificus Cmcp6
pdb|4E0B|D Chain D, 2.17 Angstrom Resolution Crystal Structure Of Malate
Dehydrogenase From Vibrio Vulnificus Cmcp6
Length = 313
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 122/295 (41%), Gaps = 30/295 (10%)
Query: 179 KITVVGA-GQVGMACTYSI---LTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKI 234
K+ V+GA G +G A + L G S+ L D G DL H P S K
Sbjct: 5 KVAVIGAAGGIGQALALLLKNRLPAG--SDLALYDI-APVTPGVAADLSH-IPTHVSIKG 60
Query: 235 ESGSDIAMS-EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLII 293
+G D + EG+ +V+I+AGV G R L + N I K L +IA P+ + II
Sbjct: 61 YAGEDPTPALEGADVVLISAGVARKPGXDRADLFNVNAGIVKSLAERIAVVCPNACIGII 120
Query: 294 SNPVDVLTYIS---WKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEH 350
+NPV+ I+ K +G R + T LD +R +A+ G P V +IG H
Sbjct: 121 TNPVNTTVPIAAEVLKKAGVYDKRKLFGVTTLDVIRSETFVAELKGQDPGEVRVPVIGGH 180
Query: 351 GDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK---GYTSW 407
SGV + L L+ G E E L + N+ EV++ K G +
Sbjct: 181 --------SGVTI----LPLLSQVEGVEFSDEEIAALTKRIQNAGTEVVEAKAGGGSATL 228
Query: 408 ALGLSVASISHTLLNNTNKIHAVS-TLIQGHHGIEEEVFLSLPCVMADNGVTHII 461
+ G + L+ + ++G+ E F + P + GV I+
Sbjct: 229 SXGQAACRFGLALVKALQGEEVIEYAYVEGNG--EHASFFAQPVKLGKEGVEEIL 281
>pdb|1MLD|A Chain A, Refined Structure Of Mitochondrial Malate Dehydrogenase
From Porcine Heart And The Consensus Structure For
Dicarboxylic Acid Oxidoreductases
pdb|1MLD|B Chain B, Refined Structure Of Mitochondrial Malate Dehydrogenase
From Porcine Heart And The Consensus Structure For
Dicarboxylic Acid Oxidoreductases
pdb|1MLD|C Chain C, Refined Structure Of Mitochondrial Malate Dehydrogenase
From Porcine Heart And The Consensus Structure For
Dicarboxylic Acid Oxidoreductases
pdb|1MLD|D Chain D, Refined Structure Of Mitochondrial Malate Dehydrogenase
From Porcine Heart And The Consensus Structure For
Dicarboxylic Acid Oxidoreductases
Length = 314
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 21/190 (11%)
Query: 244 EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYI 303
+G +V+I AGV G TR L + N I L A+ PD ++ IISNPV+ I
Sbjct: 67 KGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPI 126
Query: 304 S---WKLSG-FPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEH-GDSSVPVW 358
+ +K G + N++ G T LD +R +A+ GL P V +IG H G + +P+
Sbjct: 127 TAEVFKKHGVYNPNKIFGV-TTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLI 185
Query: 359 SGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK---GYTSWALGLSVAS 415
S + P + QD L + + EV+K K G + ++ + A
Sbjct: 186 S----------QCTPKVDFPQD--QLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGAR 233
Query: 416 ISHTLLNNTN 425
+L++ N
Sbjct: 234 FVFSLVDAMN 243
>pdb|2DFD|A Chain A, Crystal Structure Of Human Malate Dehydrogenase Type 2
pdb|2DFD|B Chain B, Crystal Structure Of Human Malate Dehydrogenase Type 2
pdb|2DFD|C Chain C, Crystal Structure Of Human Malate Dehydrogenase Type 2
pdb|2DFD|D Chain D, Crystal Structure Of Human Malate Dehydrogenase Type 2
Length = 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 25/224 (11%)
Query: 244 EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYI 303
+G +V+I AGV G TR L + N I L A+ P+ ++ +I+NPV+ I
Sbjct: 95 KGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVNSTIPI 154
Query: 304 S---WKLSG-FPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIGEH-GDSSVPVW 358
+ +K G + N++ G T LD +R +A+ GL P V+ +IG H G + +P+
Sbjct: 155 TAEVFKKHGVYNPNKIFGV-TTLDIVRANTFVAELKGLDPARVNVPVIGGHAGKTIIPLI 213
Query: 359 SGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK---GYTSWALGLSVAS 415
S + P + QD L + + EV+K K G + ++ + A
Sbjct: 214 S----------QCTPKVDFPQD--QLTALTGRIQEAGTEVVKAKAGAGSATLSMAYAGAR 261
Query: 416 ISHTLLNNTNKIHAV--STLIQGHHGIEEEVFLSLPCVMADNGV 457
+L++ N V + ++ E + S P ++ G+
Sbjct: 262 FVFSLVDAMNGKEGVVECSFVKSQE--TECTYFSTPLLLGKKGI 303
>pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate
Dehydrogenase Have Different Activities And Stabilities
But Similar Crystal Structures
pdb|1SEV|B Chain B, Mature And Translocatable Forms Of Glyoxysomal Malate
Dehydrogenase Have Different Activities And Stabilities
But Similar Crystal Structures
Length = 362
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-NEDRCKGEMLDLQHGA---PFL 229
+P K+ ++GA G +G + + S L D N ++ + GA FL
Sbjct: 42 APGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFL 101
Query: 230 RSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCI 289
++E A G ++I+ AGV G TR L N I K L IAK P I
Sbjct: 102 GQQQLE-----AALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAI 156
Query: 290 LLIISNPVDVLTYIS---WKLSG-FPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGF 345
+ +ISNPV+ I+ +K +G + R++G T LD +R +A+ LGL P V
Sbjct: 157 VNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPRDVDVP 215
Query: 346 IIGEHGDSSVPVWSGVNVAGVT----LKELNPTIGTEQDTENFVRLHADVVNSAYEVIKL 401
++G H AGVT L ++ P Q+ ++ L + N EV++
Sbjct: 216 VVGGH-------------AGVTILPLLSQVKPPSSFTQEEISY--LTDRIQNGGTEVVEA 260
Query: 402 K-GYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLS 447
K G S L ++ A++ A ++G G+ E F+S
Sbjct: 261 KAGAGSATLSMAYAAVKFA--------DACLRGLRGDAGVIECAFVS 299
>pdb|1SMK|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate
Dehydrogenase Have Different Activities And Stabilities
But Similar Crystal Structures
pdb|1SMK|B Chain B, Mature And Translocatable Forms Of Glyoxysomal Malate
Dehydrogenase Have Different Activities And Stabilities
But Similar Crystal Structures
pdb|1SMK|C Chain C, Mature And Translocatable Forms Of Glyoxysomal Malate
Dehydrogenase Have Different Activities And Stabilities
But Similar Crystal Structures
pdb|1SMK|D Chain D, Mature And Translocatable Forms Of Glyoxysomal Malate
Dehydrogenase Have Different Activities And Stabilities
But Similar Crystal Structures
pdb|1SMK|E Chain E, Mature And Translocatable Forms Of Glyoxysomal Malate
Dehydrogenase Have Different Activities And Stabilities
But Similar Crystal Structures
pdb|1SMK|F Chain F, Mature And Translocatable Forms Of Glyoxysomal Malate
Dehydrogenase Have Different Activities And Stabilities
But Similar Crystal Structures
pdb|1SMK|G Chain G, Mature And Translocatable Forms Of Glyoxysomal Malate
Dehydrogenase Have Different Activities And Stabilities
But Similar Crystal Structures
pdb|1SMK|H Chain H, Mature And Translocatable Forms Of Glyoxysomal Malate
Dehydrogenase Have Different Activities And Stabilities
But Similar Crystal Structures
Length = 326
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-NEDRCKGEMLDLQHGA---PFL 229
+P K+ ++GA G +G + + S L D N ++ + GA FL
Sbjct: 6 APGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFL 65
Query: 230 RSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCI 289
++E A G ++I+ AGV G TR L N I K L IAK P I
Sbjct: 66 GQQQLE-----AALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAI 120
Query: 290 LLIISNPVDVLTYIS---WKLSG-FPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGF 345
+ +ISNPV+ I+ +K +G + R++G T LD +R +A+ LGL P V
Sbjct: 121 VNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPRDVDVP 179
Query: 346 IIGEHGDSSVPVWSGVNVAGVT----LKELNPTIGTEQDTENFVRLHADVVNSAYEVIKL 401
++G H AGVT L ++ P Q+ ++ L + N EV++
Sbjct: 180 VVGGH-------------AGVTILPLLSQVKPPSSFTQEEISY--LTDRIQNGGTEVVEA 224
Query: 402 K-GYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLS 447
K G S L ++ A++ A ++G G+ E F+S
Sbjct: 225 KAGAGSATLSMAYAAVKFA--------DACLRGLRGDAGVIECAFVS 263
>pdb|4H7P|A Chain A, Crystal Structure Of A Putative Cytosolic Malate
Dehydrogenase From Leishmania Major Friedlin
pdb|4H7P|B Chain B, Crystal Structure Of A Putative Cytosolic Malate
Dehydrogenase From Leishmania Major Friedlin
pdb|4I1I|A Chain A, Crystal Structure Of A Putative Cytosolic Malate
Dehydrogenase From Leishmania Major Friedlin In Complex
With Nad
pdb|4I1I|B Chain B, Crystal Structure Of A Putative Cytosolic Malate
Dehydrogenase From Leishmania Major Friedlin In Complex
With Nad
Length = 345
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 16/249 (6%)
Query: 244 EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAK-GSPDCILLIISNPVDVLTY 302
+G I I+ G R L++ N +IFK+ IA + DC ++++ NP +
Sbjct: 99 DGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNAL 158
Query: 303 ISWKLS-GFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFII-GEHGDSSVPVWSG 360
I K + G R + + T LD R LLA+K G+ V II G H + VP
Sbjct: 159 ILLKSAQGKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSSTQVPDTDS 218
Query: 361 VNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGY-TSWALGLSVASISHT 419
+ +E I + ++FV++ V E+I+L+G ++ + + H
Sbjct: 219 AVIGTTPARE---AIKDDALDDDFVQV---VRGRGAEIIQLRGLSSAMSAAKAAVDHVHD 272
Query: 420 LLNNTNKIHAVSTLI---QGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKS 476
++ T + VS + + +G+ + S PC G +++ L D ++ +
Sbjct: 273 WIHGTPEGVYVSMGVYSDENPYGVPSGLIFSFPCT-CHAGEWTVVSGKLNGDLGKQ--RL 329
Query: 477 AATISQIQK 485
A+TI+++Q+
Sbjct: 330 ASTIAELQE 338
>pdb|1CIV|A Chain A, Chloroplast Nadp-Dependent Malate Dehydrogenase From
Flaveria Bidentis
Length = 385
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 14/225 (6%)
Query: 260 GETRLQLVDRNVKIFKDLIPKI-AKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGS 318
G R L+D N +IF + + A SP+ ++++ NP + I K + + +
Sbjct: 133 GMERADLLDINGQIFAEQGKALNAVASPNVKVMVVGNPCNTNALICLKNAPNIPPKNFHA 192
Query: 319 GTNLDSMRFRVLLAQKLGLSPESVHGFII-GEHGDSSVPVWSGVNVAGVTLKE-LNPTIG 376
T LD R + LA K G+ + V I G H + VP + + G+ + E +
Sbjct: 193 LTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIHGIPVTEVIRDRKW 252
Query: 377 TEQDTENFVRLHADVVNSAYEVIKLKGYTSWA-LGLSVASISHTLLNNTNKIHAVSTLIQ 435
E + N V+ V+ IK G +S A +S+ +L+ T + ST +
Sbjct: 253 LEDEFTNMVQTRGGVL------IKKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSTGVY 306
Query: 436 GH---HGIEEEVFLSLPCVMADNGVTHIINQNLTPDE-AEKLRKS 476
+ +GI E++ S+PC +G + + D ++K++KS
Sbjct: 307 TNGNPYGIAEDIVFSMPCRSKGDGDYEFVKDVIFDDYLSKKIKKS 351
>pdb|7MDH|A Chain A, Structural Basis For Light Acitvation Of A Chloroplast
Enzyme. The Structure Of Sorghum Nadp-Malate
Dehydrogenase In Its Oxidized Form
pdb|7MDH|B Chain B, Structural Basis For Light Acitvation Of A Chloroplast
Enzyme. The Structure Of Sorghum Nadp-Malate
Dehydrogenase In Its Oxidized Form
pdb|7MDH|C Chain C, Structural Basis For Light Acitvation Of A Chloroplast
Enzyme. The Structure Of Sorghum Nadp-Malate
Dehydrogenase In Its Oxidized Form
pdb|7MDH|D Chain D, Structural Basis For Light Acitvation Of A Chloroplast
Enzyme. The Structure Of Sorghum Nadp-Malate
Dehydrogenase In Its Oxidized Form
Length = 375
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 18/231 (7%)
Query: 260 GETRLQLVDRNVKIFKDLIPKI-AKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGS 318
G R L+D N +IF D + A S + +L++ NP + I K + + +
Sbjct: 123 GMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHA 182
Query: 319 GTNLDSMRFRVLLAQKLGLSPESVHGFII-GEHGDSSVPVWSGVNVAGVTLKELNPTIGT 377
T LD R + LA K G+ + V I G H + VP + + G +KE+ T
Sbjct: 183 LTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKR--T 240
Query: 378 EQDTENFVRLHADVVNSAYEVIKLKGYTSWA-LGLSVASISHTLLNNTNKIHAVSTLIQ- 435
+ E F V +I+ G +S A +S+A +L+ T + ST +
Sbjct: 241 KWLEEEFT---ITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYT 297
Query: 436 --GHHGIEEEVFLSLPCVMADNG----VTHIINQNLTPDEAEKLRKSAATI 480
+GI E++ S+PC +G T + N + E+++KS A +
Sbjct: 298 TGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFL---WERIKKSEAEL 345
>pdb|4MDH|A Chain A, Refined Crystal Structure Of Cytoplasmic Malate
Dehydrogenase At 2.5-Angstroms Resolution
pdb|4MDH|B Chain B, Refined Crystal Structure Of Cytoplasmic Malate
Dehydrogenase At 2.5-Angstroms Resolution
Length = 334
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 21/205 (10%)
Query: 179 KITVVGA-GQVGMACTYSILTQGIYSN-----FCLIDSNE--DRCKGEMLDLQHGA-PFL 229
++ V GA GQ+ + YSI ++ L+D G +++LQ A P L
Sbjct: 6 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL 65
Query: 230 RSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFK---DLIPKIAKGSP 286
+ +IA + + I+ + G R L+ NVKIFK + K AK S
Sbjct: 66 KDVIATDKEEIAFKDLD-VAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSV 124
Query: 287 DCILLIISNPVDVLTYISWKLS-GFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGF 345
I ++ NP + + K + PK T LD R + +A KLG++ + V
Sbjct: 125 KVI--VVGNPANTNCLTASKSAPSIPKEN-FSCLTRLDHNRAKAQIALKLGVTSDDVKNV 181
Query: 346 II-GEHGDSSVPVWSGVNVAGVTLK 369
II G H + P VN A V L+
Sbjct: 182 IIWGNHSSTQYP---DVNHAKVKLQ 203
>pdb|5MDH|A Chain A, Crystal Structure Of Ternary Complex Of Porcine
Cytoplasmic Malate Dehydrogenase Alpha-Ketomalonate And
Tnad At 2.4 Angstroms Resolution
pdb|5MDH|B Chain B, Crystal Structure Of Ternary Complex Of Porcine
Cytoplasmic Malate Dehydrogenase Alpha-Ketomalonate And
Tnad At 2.4 Angstroms Resolution
Length = 333
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 21/205 (10%)
Query: 179 KITVVGA-GQVGMACTYSILTQGIYSN-----FCLIDSNE--DRCKGEMLDLQHGA-PFL 229
++ V GA GQ+ + YSI ++ L+D G +++LQ A P L
Sbjct: 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL 64
Query: 230 RSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFK---DLIPKIAKGSP 286
+ +IA + + I+ + G R L+ NVKIFK + K AK S
Sbjct: 65 KDVIATDKEEIAFKDLD-VAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSV 123
Query: 287 DCILLIISNPVDVLTYISWKLS-GFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGF 345
I ++ NP + + K + PK T LD R + +A KLG++ + V
Sbjct: 124 KVI--VVGNPANTNCLTASKSAPSIPKEN-FSCLTRLDHNRAKAQIALKLGVTSDDVKNV 180
Query: 346 II-GEHGDSSVPVWSGVNVAGVTLK 369
II G H + P VN A V L+
Sbjct: 181 IIWGNHSSTQYP---DVNHAKVKLQ 202
>pdb|3D5T|A Chain A, Crystal Structure Of Malate Dehydrogenase From
Burkholderia Pseudomallei
pdb|3D5T|B Chain B, Crystal Structure Of Malate Dehydrogenase From
Burkholderia Pseudomallei
pdb|3D5T|C Chain C, Crystal Structure Of Malate Dehydrogenase From
Burkholderia Pseudomallei
pdb|3D5T|D Chain D, Crystal Structure Of Malate Dehydrogenase From
Burkholderia Pseudomallei
Length = 331
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 118/299 (39%), Gaps = 22/299 (7%)
Query: 172 SIESPDQKITVVGA-GQVGMACTYSILT-------QGIYSNFCLIDSNEDRCKGEMLDLQ 223
S+ P +++ V GA GQ+ + + I Q + + + KG +++L
Sbjct: 4 SMAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQAAVKGVVMELD 63
Query: 224 HGA-PFLRSPKIESGSDIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIA 282
A P L I +A + +++ A RS G R L+ N +IF +
Sbjct: 64 DCAFPLLAGVVITDDPKVAFKDADVALLVGARPRS-KGMERKDLLSANAEIFTVQGAALN 122
Query: 283 K-GSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPES 341
+ S D +L++ NP + YI+ K + + + LD R LA K G S
Sbjct: 123 EVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVAS 182
Query: 342 VHGF-IIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIK 400
+ + G H + P + G +L +L D N V +I+
Sbjct: 183 IEKLAVWGNHSPTMYPDFRFATAEGESLLKL-----INDDVWNRDTFIPTVGKRGAAIIE 237
Query: 401 LKGYTSWALGLSVASISHT---LLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNG 456
+G +S A + A+I H +L K + G +GI E++ +P V+ +NG
Sbjct: 238 ARGLSS-AASAANAAIDHVRDWVLGTNGKWVTMGIPSDGSYGIPEDIIYGVP-VICENG 294
>pdb|2VDC|G Chain G, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|H Chain H, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|I Chain I, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|J Chain J, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|K Chain K, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|L Chain L, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications
Length = 456
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 57/151 (37%), Gaps = 5/151 (3%)
Query: 142 GMACTYSILTQTMARDAVSTVDRLLSQVAPSIESPDQKITVVGAGQVGMACTYSILTQGI 201
G+ + L + VS D + + S+ + + + V+G G M C + + QG
Sbjct: 229 GLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGA 288
Query: 202 YSNFCLIDSNEDRCKGEMLDLQH----GAPFLRSPKIESGSDIAMSEGSRIVIITAGVRS 257
S CL + G ++ H G F+ E + + G R V I GV
Sbjct: 289 TSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVAD 348
Query: 258 LVGETRLQLVD-RNVKIFKDLIPKIAKGSPD 287
G Q+++ + DL+ K P+
Sbjct: 349 ATGRQTPQVIEGSEFTVQADLVIKALGFEPE 379
>pdb|3UAN|A Chain A, Crystal Structure Of 3-O-Sulfotransferase (3-Ost-1) With
Bound Pap And Heptasaccharide Substrate
pdb|3UAN|B Chain B, Crystal Structure Of 3-O-Sulfotransferase (3-Ost-1) With
Bound Pap And Heptasaccharide Substrate
Length = 269
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 163 DRLLSQVAPSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGE 218
DRL+ P I+ ++ + + + Q+ + Y T+G Y CL DS +DRC E
Sbjct: 180 DRLIRDPFPEIQKVERFLKL--SPQINASNFYFNKTKGFY---CLRDSGKDRCLHE 230
>pdb|1VKJ|A Chain A, Crystal Structure Of Heparan Sulfate 3-O-Sulfotransferase
Isoform 1 In The Presence Of Pap
pdb|1VKJ|B Chain B, Crystal Structure Of Heparan Sulfate 3-O-Sulfotransferase
Isoform 1 In The Presence Of Pap
pdb|1VKJ|C Chain C, Crystal Structure Of Heparan Sulfate 3-O-Sulfotransferase
Isoform 1 In The Presence Of Pap
Length = 285
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 163 DRLLSQVAPSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGE 218
DRL+ P I+ ++ + + + Q+ + Y T+G Y CL DS +DRC E
Sbjct: 196 DRLIRDPFPEIQKVERFLKL--SPQINASNFYFNKTKGFY---CLRDSGKDRCLHE 246
>pdb|3ATS|A Chain A, Crystal Structure Of Rv3168
pdb|3ATT|A Chain A, Crystal Structure Of Rv3168 With Atp
Length = 357
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 113 STVDRLLSQVAPSIESPDQKITVVGAGQVGMACTYSILTQTMARDAVSTVDRLLSQVAPS 172
+ + R LS V P +P+ + G GM+ ILT +D S +L+++VAP+
Sbjct: 4 AVISRWLSSVLPGGAAPEVTVES-GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPA 62
Query: 173 IE 174
E
Sbjct: 63 AE 64
>pdb|3HS3|A Chain A, Crystal Structure Of Periplasmic Binding Ribose Operon
Repressor Protein From Lactobacillus Acidophilus
pdb|3HS3|B Chain B, Crystal Structure Of Periplasmic Binding Ribose Operon
Repressor Protein From Lactobacillus Acidophilus
Length = 277
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 386 RLHADVVNSAYEVIKLKGYT---SWALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEE 442
R +A +++ EVI+ +GYT S++ V + ++N N + V +I I
Sbjct: 23 RFYAQIIDGIQEVIQKEGYTALISFSTNSDVKKYQNAIINFEN--NNVDGIITSAFTIPP 80
Query: 443 EVFLSLPCVMAD 454
L+ P VM D
Sbjct: 81 NFHLNTPLVMYD 92
>pdb|1W27|A Chain A, Phenylalanine Ammonia-Lyase (Pal) From Petroselinum
Crispum
pdb|1W27|B Chain B, Phenylalanine Ammonia-Lyase (Pal) From Petroselinum
Crispum
Length = 714
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 9/38 (23%)
Query: 430 VSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTP 467
++TL+QG+ GI E+ +T +NQN+TP
Sbjct: 164 INTLLQGYSGIRFEIL---------EAITKFLNQNITP 192
>pdb|1S5J|A Chain A, Insight In Dna Replication: The Crystal Structure Of Dna
Polymerase B1 From The Archaeon Sulfolobus Solfataricus
Length = 847
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 368 LKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSV 413
+KEL +I + D + R DVV +YE +K KGY L V
Sbjct: 699 VKELMISINSPNDVKEIKRKIVDVVKGSYEKLKNKGYNLDELAFKV 744
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.131 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,940,302
Number of Sequences: 62578
Number of extensions: 573741
Number of successful extensions: 1401
Number of sequences better than 100.0: 105
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1166
Number of HSP's gapped (non-prelim): 150
length of query: 488
length of database: 14,973,337
effective HSP length: 103
effective length of query: 385
effective length of database: 8,527,803
effective search space: 3283204155
effective search space used: 3283204155
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 53 (25.0 bits)