Query psy12825
Match_columns 488
No_of_seqs 302 out of 1843
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 20:48:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12825.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12825hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aj2_A L-lactate dehydrogenase 100.0 1.9E-69 6.6E-74 552.9 34.2 315 173-487 15-329 (331)
2 3vku_A L-LDH, L-lactate dehydr 100.0 9.7E-67 3.3E-71 531.9 28.0 310 175-487 7-316 (326)
3 3pqe_A L-LDH, L-lactate dehydr 100.0 9.1E-66 3.1E-70 525.1 31.4 309 176-487 4-313 (326)
4 2xxj_A L-LDH, L-lactate dehydr 100.0 1.3E-64 4.5E-69 513.6 32.8 308 178-487 1-308 (310)
5 3tl2_A Malate dehydrogenase; c 100.0 9.9E-65 3.4E-69 515.3 31.7 303 176-487 7-314 (315)
6 3nep_X Malate dehydrogenase; h 100.0 8.6E-65 2.9E-69 515.5 30.9 302 178-487 1-304 (314)
7 1ez4_A Lactate dehydrogenase; 100.0 2.4E-64 8.1E-69 513.4 31.9 308 176-487 4-311 (318)
8 3p7m_A Malate dehydrogenase; p 100.0 2.3E-64 7.9E-69 514.0 31.4 310 174-487 2-315 (321)
9 1oju_A MDH, malate dehydrogena 100.0 4.2E-64 1.4E-68 506.2 32.5 291 178-487 1-292 (294)
10 2zqz_A L-LDH, L-lactate dehydr 100.0 5E-64 1.7E-68 512.6 32.7 309 175-487 7-316 (326)
11 2x0j_A Malate dehydrogenase; o 100.0 5.7E-64 2E-68 504.6 31.4 291 178-487 1-292 (294)
12 3gvi_A Malate dehydrogenase; N 100.0 5E-64 1.7E-68 511.8 29.0 310 174-487 4-316 (324)
13 2d4a_B Malate dehydrogenase; a 100.0 1.3E-63 4.3E-68 506.0 31.3 300 179-487 1-302 (308)
14 3d0o_A L-LDH 1, L-lactate dehy 100.0 2.4E-63 8.4E-68 505.7 32.7 309 175-487 4-313 (317)
15 1y6j_A L-lactate dehydrogenase 100.0 2E-63 6.8E-68 506.6 28.2 310 176-487 6-315 (318)
16 1ldn_A L-lactate dehydrogenase 100.0 3.9E-62 1.3E-66 496.6 35.8 311 175-488 4-315 (316)
17 1ur5_A Malate dehydrogenase; o 100.0 7E-62 2.4E-66 493.3 30.6 301 178-487 3-306 (309)
18 3ldh_A Lactate dehydrogenase; 100.0 3.7E-63 1.3E-67 505.4 19.5 303 163-487 6-328 (330)
19 7mdh_A Protein (malate dehydro 100.0 7.3E-61 2.5E-65 495.1 31.9 304 173-486 28-351 (375)
20 1o6z_A MDH, malate dehydrogena 100.0 3.7E-60 1.3E-64 479.4 34.1 299 178-487 1-302 (303)
21 3fi9_A Malate dehydrogenase; s 100.0 7.6E-61 2.6E-65 491.6 29.2 307 173-487 4-317 (343)
22 1t2d_A LDH-P, L-lactate dehydr 100.0 4.5E-60 1.5E-64 482.7 31.2 307 176-486 3-315 (322)
23 2hjr_A Malate dehydrogenase; m 100.0 2E-59 6.8E-64 479.1 31.0 308 176-487 13-323 (328)
24 2i6t_A Ubiquitin-conjugating e 100.0 2.3E-59 7.8E-64 473.7 27.5 290 174-487 11-301 (303)
25 1hye_A L-lactate/malate dehydr 100.0 4E-59 1.4E-63 473.7 29.2 303 178-487 1-310 (313)
26 1pzg_A LDH, lactate dehydrogen 100.0 6.8E-59 2.3E-63 475.7 30.3 307 177-487 9-324 (331)
27 2v6b_A L-LDH, L-lactate dehydr 100.0 9.2E-59 3.2E-63 469.3 29.5 302 178-487 1-302 (304)
28 1guz_A Malate dehydrogenase; o 100.0 2.4E-58 8.3E-63 467.3 31.0 302 178-487 1-305 (310)
29 4h7p_A Malate dehydrogenase; s 100.0 7.3E-58 2.5E-62 469.4 29.6 306 173-486 20-342 (345)
30 3hhp_A Malate dehydrogenase; M 100.0 1.8E-57 6E-62 461.4 31.8 287 178-485 1-304 (312)
31 5mdh_A Malate dehydrogenase; o 100.0 1.2E-57 4.2E-62 466.5 27.4 303 176-487 2-326 (333)
32 1a5z_A L-lactate dehydrogenase 100.0 1.5E-56 5.2E-61 455.8 35.3 307 178-487 1-307 (319)
33 1b8p_A Protein (malate dehydro 100.0 5.2E-55 1.8E-59 446.4 30.5 304 176-487 4-324 (329)
34 1mld_A Malate dehydrogenase; o 100.0 2.3E-54 8E-59 439.1 31.1 289 178-487 1-306 (314)
35 2ewd_A Lactate dehydrogenase,; 100.0 7.6E-53 2.6E-57 427.8 32.6 308 176-487 3-313 (317)
36 1hyh_A L-hicdh, L-2-hydroxyiso 100.0 1.2E-52 4.2E-57 424.6 32.5 300 177-487 1-305 (309)
37 1smk_A Malate dehydrogenase, g 100.0 1.3E-52 4.3E-57 428.4 30.5 292 175-487 6-314 (326)
38 1up7_A 6-phospho-beta-glucosid 100.0 2E-47 6.9E-52 401.5 25.5 300 177-486 2-374 (417)
39 1lld_A L-lactate dehydrogenase 100.0 9.3E-46 3.2E-50 374.1 35.6 312 175-487 5-317 (319)
40 1y7t_A Malate dehydrogenase; N 100.0 6.1E-45 2.1E-49 370.8 31.9 303 176-487 3-321 (327)
41 1s6y_A 6-phospho-beta-glucosid 100.0 4.2E-46 1.5E-50 394.9 23.1 298 177-481 7-392 (450)
42 1u8x_X Maltose-6'-phosphate gl 100.0 3.3E-44 1.1E-48 382.2 20.8 298 176-478 27-413 (472)
43 3fef_A Putative glucosidase LP 100.0 5.1E-38 1.8E-42 332.1 28.3 293 175-478 3-394 (450)
44 1obb_A Maltase, alpha-glucosid 100.0 9.8E-37 3.3E-41 324.7 24.9 293 175-477 1-423 (480)
45 3u95_A Glycoside hydrolase, fa 100.0 5.7E-35 2E-39 311.8 22.5 284 178-473 1-407 (477)
46 3ado_A Lambda-crystallin; L-gu 99.3 1.1E-11 3.6E-16 125.8 11.8 146 176-339 5-183 (319)
47 3zwc_A Peroxisomal bifunctiona 99.2 2E-10 6.8E-15 128.4 14.4 147 175-339 314-489 (742)
48 3k6j_A Protein F01G10.3, confi 98.9 3.7E-09 1.3E-13 112.0 12.5 146 175-339 52-226 (460)
49 3mog_A Probable 3-hydroxybutyr 98.9 3.9E-09 1.3E-13 112.7 11.0 146 176-339 4-180 (483)
50 1zcj_A Peroxisomal bifunctiona 98.9 3.1E-08 1.1E-12 105.1 16.5 147 174-338 34-209 (463)
51 2dpo_A L-gulonate 3-dehydrogen 98.9 2.8E-09 9.7E-14 108.0 8.0 108 175-299 4-126 (319)
52 1zej_A HBD-9, 3-hydroxyacyl-CO 98.8 9.6E-09 3.3E-13 102.9 10.9 99 176-298 11-109 (293)
53 2wtb_A MFP2, fatty acid multif 98.8 1.7E-08 5.8E-13 112.8 13.7 145 176-339 311-487 (725)
54 4e12_A Diketoreductase; oxidor 98.8 4.8E-09 1.6E-13 104.0 8.1 106 176-298 3-123 (283)
55 1f0y_A HCDH, L-3-hydroxyacyl-C 98.8 1.4E-08 4.8E-13 101.2 9.3 106 176-299 14-139 (302)
56 1wdk_A Fatty oxidation complex 98.7 4.1E-08 1.4E-12 109.5 9.5 147 174-338 311-488 (715)
57 2o3j_A UDP-glucose 6-dehydroge 98.4 2.9E-07 9.9E-12 98.1 8.4 122 176-299 8-141 (481)
58 3k96_A Glycerol-3-phosphate de 98.4 1.6E-06 5.6E-11 88.9 11.9 115 176-308 28-151 (356)
59 3g79_A NDP-N-acetyl-D-galactos 98.4 1.4E-06 4.7E-11 92.8 11.0 115 175-294 16-147 (478)
60 4huj_A Uncharacterized protein 98.3 1.4E-06 4.7E-11 83.0 8.9 95 176-298 22-117 (220)
61 3pid_A UDP-glucose 6-dehydroge 98.3 1.5E-06 5.3E-11 91.3 10.0 121 175-304 34-164 (432)
62 3gg2_A Sugar dehydrogenase, UD 98.3 2.3E-06 7.7E-11 90.5 10.8 112 178-298 3-127 (450)
63 1mv8_A GMD, GDP-mannose 6-dehy 98.3 2.8E-06 9.6E-11 89.2 11.0 112 178-299 1-129 (436)
64 3hwr_A 2-dehydropantoate 2-red 98.2 8E-06 2.8E-10 82.0 11.9 119 176-317 18-139 (318)
65 1dlj_A UDP-glucose dehydrogena 98.2 3.9E-06 1.3E-10 87.3 9.8 121 178-306 1-130 (402)
66 2y0c_A BCEC, UDP-glucose dehyd 98.2 3.9E-06 1.3E-10 89.4 9.7 112 174-294 5-128 (478)
67 3dtt_A NADP oxidoreductase; st 98.2 2.9E-06 9.8E-11 82.1 7.6 104 173-298 15-128 (245)
68 3vtf_A UDP-glucose 6-dehydroge 98.1 7.1E-06 2.4E-10 86.5 10.5 119 175-298 19-149 (444)
69 3tri_A Pyrroline-5-carboxylate 98.1 5.5E-06 1.9E-10 82.0 8.8 98 175-298 1-102 (280)
70 2ew2_A 2-dehydropantoate 2-red 98.1 1.1E-05 3.7E-10 79.6 10.4 105 177-299 3-113 (316)
71 2h78_A Hibadh, 3-hydroxyisobut 98.1 1.6E-05 5.4E-10 78.8 11.2 65 176-253 2-67 (302)
72 3b1f_A Putative prephenate deh 98.1 3.5E-05 1.2E-09 75.7 13.1 98 175-297 4-104 (290)
73 4a7p_A UDP-glucose dehydrogena 98.0 6.1E-06 2.1E-10 87.2 8.0 116 175-298 6-134 (446)
74 1x0v_A GPD-C, GPDH-C, glycerol 98.0 9.7E-06 3.3E-10 82.0 8.9 107 175-297 6-127 (354)
75 3d1l_A Putative NADP oxidoredu 98.0 2.1E-05 7.2E-10 76.3 10.4 93 176-296 9-104 (266)
76 3ghy_A Ketopantoate reductase 98.0 3.9E-06 1.3E-10 84.8 5.4 103 176-297 2-107 (335)
77 2raf_A Putative dinucleotide-b 98.0 2.3E-05 7.8E-10 74.0 10.3 78 175-298 17-94 (209)
78 2q3e_A UDP-glucose 6-dehydroge 98.0 1.8E-05 6E-10 83.9 10.5 120 176-299 4-137 (467)
79 1yj8_A Glycerol-3-phosphate de 98.0 1.9E-05 6.4E-10 81.0 9.9 105 177-297 21-144 (375)
80 1z82_A Glycerol-3-phosphate de 98.0 1.6E-05 5.6E-10 80.1 9.1 105 173-298 10-115 (335)
81 4dll_A 2-hydroxy-3-oxopropiona 97.9 3.8E-05 1.3E-09 77.1 10.9 66 175-253 29-95 (320)
82 3pef_A 6-phosphogluconate dehy 97.9 2.1E-05 7.1E-10 77.5 8.4 63 178-253 2-65 (287)
83 1evy_A Glycerol-3-phosphate de 97.9 1.4E-05 4.7E-10 81.5 7.1 105 176-298 14-128 (366)
84 3pdu_A 3-hydroxyisobutyrate de 97.9 2.7E-05 9.3E-10 76.6 8.9 64 177-253 1-65 (287)
85 2zyd_A 6-phosphogluconate dehy 97.9 3.5E-05 1.2E-09 82.1 10.3 102 173-298 11-117 (480)
86 2izz_A Pyrroline-5-carboxylate 97.9 6.1E-05 2.1E-09 75.7 11.4 98 174-298 19-122 (322)
87 2rcy_A Pyrroline carboxylate r 97.9 1.2E-05 4.2E-10 77.7 5.8 92 175-299 2-96 (262)
88 1yqg_A Pyrroline-5-carboxylate 97.9 8.9E-05 3E-09 71.6 11.6 92 178-299 1-93 (263)
89 3doj_A AT3G25530, dehydrogenas 97.9 3.5E-05 1.2E-09 77.0 9.0 68 173-253 17-85 (310)
90 3g0o_A 3-hydroxyisobutyrate de 97.9 8.6E-05 2.9E-09 73.8 11.8 66 176-253 6-72 (303)
91 3qha_A Putative oxidoreductase 97.8 6.1E-05 2.1E-09 74.7 10.2 90 177-295 15-106 (296)
92 2g5c_A Prephenate dehydrogenas 97.8 0.00015 5.2E-09 70.8 12.8 95 177-296 1-98 (281)
93 3ggo_A Prephenate dehydrogenas 97.8 0.00017 5.9E-09 72.4 13.3 69 176-253 32-102 (314)
94 3gt0_A Pyrroline-5-carboxylate 97.8 2E-05 6.8E-10 76.0 5.7 96 177-298 2-101 (247)
95 2iz1_A 6-phosphogluconate dehy 97.8 0.00016 5.6E-09 76.7 13.2 100 175-298 3-107 (474)
96 2cvz_A Dehydrogenase, 3-hydrox 97.8 0.00011 3.9E-09 71.7 11.2 93 177-298 1-94 (289)
97 3hn2_A 2-dehydropantoate 2-red 97.8 5.1E-05 1.7E-09 75.8 8.8 117 178-317 3-123 (312)
98 3l6d_A Putative oxidoreductase 97.8 7E-05 2.4E-09 74.7 9.6 66 175-253 7-73 (306)
99 1jay_A Coenzyme F420H2:NADP+ o 97.7 4.3E-05 1.5E-09 71.4 7.0 99 178-298 1-101 (212)
100 4aj2_A L-lactate dehydrogenase 97.7 4.9E-06 1.7E-10 84.6 0.5 59 113-171 2-63 (331)
101 2f1k_A Prephenate dehydrogenas 97.7 0.00026 8.9E-09 69.0 12.8 91 178-295 1-92 (279)
102 3ojo_A CAP5O; rossmann fold, c 97.7 0.00025 8.5E-09 74.5 13.3 115 174-298 8-134 (431)
103 3ldh_A Lactate dehydrogenase; 97.7 9.1E-06 3.1E-10 82.5 2.3 50 113-162 3-53 (330)
104 3oj0_A Glutr, glutamyl-tRNA re 97.7 4.4E-05 1.5E-09 67.3 6.3 94 177-299 21-115 (144)
105 1txg_A Glycerol-3-phosphate de 97.7 7.5E-05 2.6E-09 74.5 8.8 101 178-297 1-107 (335)
106 3ego_A Probable 2-dehydropanto 97.7 8.3E-05 2.8E-09 74.3 9.0 118 177-318 2-120 (307)
107 3c24_A Putative oxidoreductase 97.7 0.00012 4.2E-09 71.9 9.7 92 177-297 11-104 (286)
108 4e21_A 6-phosphogluconate dehy 97.7 4.6E-05 1.6E-09 78.2 6.7 93 176-297 21-118 (358)
109 1vpd_A Tartronate semialdehyde 97.7 0.00011 3.7E-09 72.4 9.1 63 178-253 6-69 (299)
110 3i83_A 2-dehydropantoate 2-red 97.7 8.8E-05 3E-09 74.3 8.6 117 178-317 3-125 (320)
111 2uyy_A N-PAC protein; long-cha 97.6 0.00014 4.7E-09 72.4 9.6 93 177-297 30-127 (316)
112 1pgj_A 6PGDH, 6-PGDH, 6-phosph 97.6 0.00016 5.6E-09 76.8 10.1 101 178-298 2-107 (478)
113 3cky_A 2-hydroxymethyl glutara 97.6 0.00016 5.4E-09 71.2 9.3 65 176-253 3-68 (301)
114 4gwg_A 6-phosphogluconate dehy 97.6 9.1E-05 3.1E-09 78.9 7.9 100 175-297 2-106 (484)
115 4fgw_A Glycerol-3-phosphate de 97.6 5E-05 1.7E-09 78.8 5.8 121 174-310 31-174 (391)
116 1bg6_A N-(1-D-carboxylethyl)-L 97.6 0.00017 5.9E-09 72.5 9.4 101 175-293 2-108 (359)
117 2pgd_A 6-phosphogluconate dehy 97.6 0.00027 9.1E-09 75.2 10.7 98 178-298 3-105 (482)
118 4ezb_A Uncharacterized conserv 97.5 0.00044 1.5E-08 69.4 11.7 68 177-254 24-96 (317)
119 3c7a_A Octopine dehydrogenase; 97.5 8.5E-05 2.9E-09 76.7 6.4 98 177-292 2-114 (404)
120 1lss_A TRK system potassium up 97.5 0.00087 3E-08 57.4 11.8 67 177-253 4-77 (140)
121 1ks9_A KPA reductase;, 2-dehyd 97.5 6.3E-05 2.1E-09 73.3 4.9 99 178-299 1-102 (291)
122 2x0j_A Malate dehydrogenase; o 97.5 1.1E-05 3.9E-10 80.6 -0.5 42 131-172 1-45 (294)
123 1yb4_A Tartronic semialdehyde 97.5 8E-05 2.7E-09 73.0 5.6 64 176-253 2-66 (295)
124 3qsg_A NAD-binding phosphogluc 97.5 0.00038 1.3E-08 69.6 10.2 66 176-253 23-91 (312)
125 2p4q_A 6-phosphogluconate dehy 97.5 0.00035 1.2E-08 74.7 10.3 100 176-298 9-113 (497)
126 2qyt_A 2-dehydropantoate 2-red 97.5 0.00013 4.4E-09 72.1 6.5 104 177-299 8-122 (317)
127 2vns_A Metalloreductase steap3 97.4 0.0001 3.6E-09 69.7 4.7 93 176-299 27-120 (215)
128 3e8x_A Putative NAD-dependent 97.4 0.0011 3.9E-08 62.3 11.2 110 173-295 17-131 (236)
129 2gf2_A Hibadh, 3-hydroxyisobut 97.3 0.00034 1.1E-08 68.7 7.5 63 178-253 1-64 (296)
130 3obb_A Probable 3-hydroxyisobu 97.3 0.00048 1.6E-08 68.8 8.6 64 177-253 3-67 (300)
131 3g17_A Similar to 2-dehydropan 97.3 0.00011 3.7E-09 72.8 3.7 108 178-317 3-112 (294)
132 3c85_A Putative glutathione-re 97.3 0.0063 2.2E-07 55.2 15.1 134 175-339 37-179 (183)
133 2ahr_A Putative pyrroline carb 97.3 0.0002 6.9E-09 69.1 5.1 66 176-253 2-68 (259)
134 4gbj_A 6-phosphogluconate dehy 97.3 0.00074 2.5E-08 67.2 9.2 63 178-253 6-69 (297)
135 2g1u_A Hypothetical protein TM 97.2 0.0021 7.1E-08 57.1 11.1 72 173-254 15-93 (155)
136 3llv_A Exopolyphosphatase-rela 97.2 0.00058 2E-08 59.5 6.6 68 176-254 5-79 (141)
137 3ktd_A Prephenate dehydrogenas 97.2 0.00089 3E-08 68.2 8.8 90 177-295 8-102 (341)
138 2pv7_A T-protein [includes: ch 97.2 0.0013 4.3E-08 65.3 9.7 77 177-294 21-99 (298)
139 2hmt_A YUAA protein; RCK, KTN, 97.1 0.002 6.7E-08 55.4 9.6 68 176-254 5-79 (144)
140 3fwz_A Inner membrane protein 97.1 0.00072 2.5E-08 59.2 6.4 110 177-316 7-123 (140)
141 3vku_A L-LDH, L-lactate dehydr 97.1 0.00026 8.8E-09 71.8 3.9 42 129-170 8-52 (326)
142 1y1p_A ARII, aldehyde reductas 97.0 0.011 3.7E-07 58.2 15.1 116 174-294 8-131 (342)
143 1id1_A Putative potassium chan 97.0 0.007 2.4E-07 53.4 12.0 129 175-336 1-138 (153)
144 1np3_A Ketol-acid reductoisome 97.0 0.0016 5.5E-08 65.9 8.8 65 176-253 15-80 (338)
145 3ic5_A Putative saccharopine d 97.0 0.0012 4.2E-08 54.7 6.5 69 176-254 4-78 (118)
146 1i36_A Conserved hypothetical 97.0 0.0027 9.2E-08 61.2 9.7 61 178-253 1-64 (264)
147 3l9w_A Glutathione-regulated p 97.0 0.002 6.9E-08 67.1 9.2 95 176-296 3-104 (413)
148 3l4b_C TRKA K+ channel protien 96.9 0.00098 3.4E-08 62.6 5.9 66 178-253 1-73 (218)
149 3ew7_A LMO0794 protein; Q8Y8U8 96.9 0.0017 5.9E-08 59.9 7.4 96 178-294 1-102 (221)
150 3h2s_A Putative NADH-flavin re 96.9 0.0014 4.8E-08 60.8 6.7 98 178-294 1-104 (224)
151 2i76_A Hypothetical protein; N 96.9 0.00032 1.1E-08 68.7 2.3 63 177-253 2-66 (276)
152 2i99_A MU-crystallin homolog; 96.8 0.0017 5.8E-08 65.0 6.9 69 176-253 134-204 (312)
153 1x7d_A Ornithine cyclodeaminas 96.8 0.0031 1.1E-07 64.3 8.9 75 176-254 128-203 (350)
154 2yjz_A Metalloreductase steap4 95.7 0.00029 9.9E-09 66.2 0.0 67 173-253 15-81 (201)
155 2hk9_A Shikimate dehydrogenase 96.6 0.0021 7.1E-08 63.1 6.1 70 175-256 127-197 (275)
156 3gvx_A Glycerate dehydrogenase 96.6 0.0053 1.8E-07 61.0 8.4 127 137-294 77-209 (290)
157 3fi9_A Malate dehydrogenase; s 96.5 0.00033 1.1E-08 71.4 -0.5 42 130-171 8-53 (343)
158 2gcg_A Glyoxylate reductase/hy 96.5 0.0098 3.4E-07 59.9 10.2 89 152-254 122-219 (330)
159 4dgs_A Dehydrogenase; structur 96.5 0.0094 3.2E-07 60.6 10.0 113 152-295 139-259 (340)
160 3dhn_A NAD-dependent epimerase 96.5 0.0077 2.6E-07 55.9 8.6 99 177-294 4-111 (227)
161 3r6d_A NAD-dependent epimerase 96.5 0.013 4.5E-07 54.3 10.2 92 179-294 7-107 (221)
162 2w2k_A D-mandelate dehydrogena 96.5 0.012 4.2E-07 59.8 10.6 68 173-253 159-228 (348)
163 4id9_A Short-chain dehydrogena 96.5 0.012 4E-07 58.4 10.3 104 173-294 15-125 (347)
164 1omo_A Alanine dehydrogenase; 96.4 0.0072 2.4E-07 60.8 8.4 72 176-254 124-196 (322)
165 3sxp_A ADP-L-glycero-D-mannohe 96.4 0.016 5.6E-07 57.9 11.0 116 174-294 7-137 (362)
166 3oh8_A Nucleoside-diphosphate 96.4 0.0045 1.5E-07 65.9 7.0 103 177-294 147-253 (516)
167 1vl6_A Malate oxidoreductase; 96.4 0.0044 1.5E-07 63.9 6.6 118 174-319 189-316 (388)
168 1nyt_A Shikimate 5-dehydrogena 96.3 0.015 5E-07 56.8 10.1 74 175-257 117-192 (271)
169 3tum_A Shikimate dehydrogenase 96.3 0.016 5.3E-07 57.0 10.1 145 175-342 123-269 (269)
170 3gpi_A NAD-dependent epimerase 96.3 0.013 4.6E-07 56.5 9.6 101 175-294 1-108 (286)
171 1jw9_B Molybdopterin biosynthe 96.3 0.005 1.7E-07 59.6 6.4 74 176-253 30-129 (249)
172 3dqp_A Oxidoreductase YLBE; al 96.3 0.0067 2.3E-07 56.3 7.0 98 178-295 1-106 (219)
173 1xg5_A ARPG836; short chain de 96.3 0.029 1E-06 54.2 11.8 115 175-294 30-171 (279)
174 2d5c_A AROE, shikimate 5-dehyd 96.2 0.0091 3.1E-07 57.8 7.9 68 175-256 115-182 (263)
175 1p77_A Shikimate 5-dehydrogena 96.2 0.011 3.8E-07 57.7 8.5 73 175-256 117-191 (272)
176 3jyo_A Quinate/shikimate dehyd 96.2 0.0088 3E-07 59.1 7.7 78 174-255 124-204 (283)
177 3phh_A Shikimate dehydrogenase 96.2 0.0094 3.2E-07 58.6 7.7 65 177-255 118-182 (269)
178 1hdo_A Biliverdin IX beta redu 96.2 0.016 5.4E-07 52.5 8.8 101 177-294 3-110 (206)
179 1nvt_A Shikimate 5'-dehydrogen 96.2 0.007 2.4E-07 59.6 6.8 80 175-257 126-205 (287)
180 3m2p_A UDP-N-acetylglucosamine 96.2 0.0078 2.7E-07 58.9 7.0 105 177-294 2-108 (311)
181 3imf_A Short chain dehydrogena 96.1 0.045 1.5E-06 52.4 12.2 115 174-295 3-143 (257)
182 3tjr_A Short chain dehydrogena 96.1 0.054 1.9E-06 53.2 13.0 115 175-295 29-168 (301)
183 3eag_A UDP-N-acetylmuramate:L- 96.1 0.021 7.1E-07 57.3 10.0 125 176-312 3-137 (326)
184 3ba1_A HPPR, hydroxyphenylpyru 96.1 0.0051 1.7E-07 62.3 5.5 83 153-253 134-223 (333)
185 4egf_A L-xylulose reductase; s 96.1 0.058 2E-06 51.9 12.8 115 175-295 18-158 (266)
186 2egg_A AROE, shikimate 5-dehyd 96.1 0.0068 2.3E-07 60.2 6.3 77 175-257 139-216 (297)
187 3ruf_A WBGU; rossmann fold, UD 96.1 0.016 5.3E-07 57.6 8.8 117 175-294 23-150 (351)
188 1wma_A Carbonyl reductase [NAD 96.1 0.025 8.7E-07 53.6 9.9 115 176-295 3-139 (276)
189 3nzo_A UDP-N-acetylglucosamine 96.0 0.041 1.4E-06 56.5 12.1 116 176-294 34-164 (399)
190 3i1j_A Oxidoreductase, short c 96.0 0.054 1.9E-06 51.0 11.9 117 174-295 11-154 (247)
191 3rwb_A TPLDH, pyridoxal 4-dehy 96.0 0.068 2.3E-06 50.8 12.7 113 174-296 3-141 (247)
192 3enk_A UDP-glucose 4-epimerase 96.0 0.022 7.5E-07 56.1 9.5 113 176-294 4-128 (341)
193 3qiv_A Short-chain dehydrogena 96.0 0.046 1.6E-06 51.7 11.4 115 175-297 7-150 (253)
194 4e6p_A Probable sorbitol dehyd 96.0 0.059 2E-06 51.5 12.3 112 175-295 6-142 (259)
195 2x4g_A Nucleoside-diphosphate- 96.0 0.017 5.9E-07 56.9 8.6 107 176-294 12-125 (342)
196 3pp8_A Glyoxylate/hydroxypyruv 96.0 0.012 4.1E-07 59.1 7.4 116 152-295 111-230 (315)
197 1zk4_A R-specific alcohol dehy 96.0 0.064 2.2E-06 50.5 12.2 115 174-296 3-143 (251)
198 3pwz_A Shikimate dehydrogenase 95.9 0.019 6.5E-07 56.4 8.6 73 174-255 117-191 (272)
199 2zqz_A L-LDH, L-lactate dehydr 95.9 0.0013 4.3E-08 66.5 0.0 34 129-162 8-41 (326)
200 3r1i_A Short-chain type dehydr 95.9 0.079 2.7E-06 51.4 12.9 114 175-294 30-168 (276)
201 3rft_A Uronate dehydrogenase; 95.9 0.014 4.9E-07 56.1 7.5 102 176-294 2-110 (267)
202 2gdz_A NAD+-dependent 15-hydro 95.9 0.066 2.2E-06 51.3 12.2 114 175-295 5-140 (267)
203 3o38_A Short chain dehydrogena 95.9 0.09 3.1E-06 50.2 13.2 116 174-295 19-161 (266)
204 1yb1_A 17-beta-hydroxysteroid 95.9 0.11 3.8E-06 50.0 13.8 116 173-296 27-168 (272)
205 1iy8_A Levodione reductase; ox 95.9 0.069 2.4E-06 51.2 12.2 115 175-295 11-152 (267)
206 1xq6_A Unknown protein; struct 95.9 0.052 1.8E-06 50.6 11.0 109 175-294 2-132 (253)
207 3o8q_A Shikimate 5-dehydrogena 95.9 0.024 8.1E-07 56.0 8.9 74 174-255 123-197 (281)
208 2d0i_A Dehydrogenase; structur 95.9 0.022 7.5E-07 57.5 8.8 88 152-254 110-209 (333)
209 1fmc_A 7 alpha-hydroxysteroid 95.8 0.042 1.4E-06 51.8 10.3 114 175-295 9-146 (255)
210 3svt_A Short-chain type dehydr 95.8 0.059 2E-06 52.1 11.6 116 175-295 9-151 (281)
211 1zem_A Xylitol dehydrogenase; 95.8 0.064 2.2E-06 51.4 11.7 113 175-295 5-144 (262)
212 3awd_A GOX2181, putative polyo 95.8 0.066 2.3E-06 50.6 11.7 77 175-257 11-102 (260)
213 2gn4_A FLAA1 protein, UDP-GLCN 95.8 0.0078 2.7E-07 60.5 5.3 115 173-294 17-141 (344)
214 1ez4_A Lactate dehydrogenase; 95.8 0.0013 4.4E-08 66.3 -0.5 32 131-162 6-37 (318)
215 3hdj_A Probable ornithine cycl 95.8 0.0073 2.5E-07 60.6 5.0 71 177-254 121-192 (313)
216 3sx2_A Putative 3-ketoacyl-(ac 95.8 0.13 4.4E-06 49.5 13.9 115 174-295 10-158 (278)
217 2bka_A CC3, TAT-interacting pr 95.8 0.0032 1.1E-07 59.1 2.1 107 176-294 17-131 (242)
218 3pgx_A Carveol dehydrogenase; 95.7 0.11 3.9E-06 50.1 13.1 115 174-295 12-165 (280)
219 3uuw_A Putative oxidoreductase 95.7 0.008 2.8E-07 59.3 4.9 70 173-253 2-74 (308)
220 3abi_A Putative uncharacterize 95.7 0.0024 8.1E-08 65.1 1.0 67 176-254 15-86 (365)
221 2jah_A Clavulanic acid dehydro 95.7 0.12 4.2E-06 48.9 13.1 112 175-295 5-142 (247)
222 3l6e_A Oxidoreductase, short-c 95.7 0.097 3.3E-06 49.4 12.3 108 176-294 2-134 (235)
223 1hxh_A 3BETA/17BETA-hydroxyste 95.7 0.064 2.2E-06 51.0 11.1 109 175-295 4-138 (253)
224 3uve_A Carveol dehydrogenase ( 95.7 0.12 4.2E-06 49.9 13.2 115 174-295 8-165 (286)
225 2dbq_A Glyoxylate reductase; D 95.7 0.014 4.6E-07 59.0 6.5 66 174-254 147-213 (334)
226 3ius_A Uncharacterized conserv 95.7 0.033 1.1E-06 53.5 9.0 68 177-256 5-74 (286)
227 2b69_A UDP-glucuronate decarbo 95.7 0.029 9.8E-07 55.6 8.8 112 173-294 23-140 (343)
228 7mdh_A Protein (malate dehydro 95.7 0.0024 8.1E-08 65.8 0.8 43 130-172 32-85 (375)
229 3pk0_A Short-chain dehydrogena 95.7 0.094 3.2E-06 50.3 12.1 114 175-295 8-147 (262)
230 3rkr_A Short chain oxidoreduct 95.6 0.057 2E-06 51.7 10.5 115 174-296 26-167 (262)
231 2ae2_A Protein (tropinone redu 95.6 0.17 5.9E-06 48.1 13.9 113 175-295 7-146 (260)
232 3qy9_A DHPR, dihydrodipicolina 95.6 0.012 4.1E-07 57.0 5.6 60 175-252 1-61 (243)
233 2xxj_A L-LDH, L-lactate dehydr 95.6 0.0016 5.3E-08 65.4 -0.7 32 131-162 1-32 (310)
234 3lf2_A Short chain oxidoreduct 95.6 0.2 7E-06 47.9 14.5 114 175-294 6-145 (265)
235 3pxx_A Carveol dehydrogenase; 95.6 0.16 5.4E-06 48.9 13.6 115 174-295 7-154 (287)
236 3u62_A Shikimate dehydrogenase 95.6 0.017 5.8E-07 56.1 6.6 69 175-255 107-176 (253)
237 2zat_A Dehydrogenase/reductase 95.6 0.094 3.2E-06 49.9 11.8 113 174-294 11-150 (260)
238 3dfu_A Uncharacterized protein 95.6 0.014 4.6E-07 56.3 5.7 33 176-210 5-37 (232)
239 3h9u_A Adenosylhomocysteinase; 95.6 0.031 1E-06 58.6 8.8 94 173-297 207-301 (436)
240 1orr_A CDP-tyvelose-2-epimeras 95.6 0.045 1.5E-06 53.8 9.7 112 177-294 1-124 (347)
241 3bio_A Oxidoreductase, GFO/IDH 95.6 0.047 1.6E-06 54.2 9.9 66 175-253 7-73 (304)
242 3nyw_A Putative oxidoreductase 95.6 0.084 2.9E-06 50.3 11.3 118 175-296 5-146 (250)
243 1gee_A Glucose 1-dehydrogenase 95.6 0.078 2.7E-06 50.3 11.0 114 175-295 5-145 (261)
244 1geg_A Acetoin reductase; SDR 95.5 0.13 4.4E-06 48.9 12.5 112 178-295 3-139 (256)
245 3gaf_A 7-alpha-hydroxysteroid 95.5 0.12 4.2E-06 49.3 12.4 113 175-295 10-147 (256)
246 2rhc_B Actinorhodin polyketide 95.5 0.12 4E-06 50.1 12.4 114 175-295 20-160 (277)
247 3t4e_A Quinate/shikimate dehyd 95.5 0.024 8.2E-07 56.9 7.5 77 174-255 145-230 (312)
248 3slg_A PBGP3 protein; structur 95.5 0.0091 3.1E-07 59.9 4.5 111 173-295 20-141 (372)
249 3t4x_A Oxidoreductase, short c 95.5 0.1 3.5E-06 50.1 11.9 115 175-295 8-144 (267)
250 3t7c_A Carveol dehydrogenase; 95.5 0.16 5.4E-06 49.7 13.4 115 174-295 25-178 (299)
251 4g65_A TRK system potassium up 95.5 0.013 4.4E-07 61.9 5.7 68 176-253 2-76 (461)
252 3tsc_A Putative oxidoreductase 95.5 0.17 5.9E-06 48.7 13.4 115 174-295 8-161 (277)
253 3pqe_A L-LDH, L-lactate dehydr 95.5 0.0022 7.4E-08 64.9 -0.3 33 130-162 5-37 (326)
254 4fn4_A Short chain dehydrogena 95.5 0.15 5.1E-06 49.5 12.7 148 175-347 5-185 (254)
255 1zud_1 Adenylyltransferase THI 95.4 0.027 9.1E-07 54.5 7.3 74 176-253 27-126 (251)
256 4eso_A Putative oxidoreductase 95.4 0.078 2.7E-06 50.7 10.6 112 175-295 6-139 (255)
257 3ioy_A Short-chain dehydrogena 95.4 0.12 4.2E-06 51.2 12.4 116 175-295 6-152 (319)
258 3gg9_A D-3-phosphoglycerate de 95.4 0.064 2.2E-06 54.6 10.5 127 142-295 108-252 (352)
259 1mxh_A Pteridine reductase 2; 95.4 0.11 3.9E-06 49.8 11.8 48 175-224 9-58 (276)
260 1npy_A Hypothetical shikimate 95.4 0.051 1.7E-06 53.3 9.4 69 176-256 118-186 (271)
261 3lyl_A 3-oxoacyl-(acyl-carrier 95.4 0.09 3.1E-06 49.5 10.9 115 175-296 3-142 (247)
262 2i6t_A Ubiquitin-conjugating e 95.4 0.0023 7.9E-08 64.0 -0.3 33 130-162 14-46 (303)
263 3dfz_A SIRC, precorrin-2 dehyd 95.4 0.011 3.6E-07 56.7 4.2 71 174-254 28-100 (223)
264 1y81_A Conserved hypothetical 95.4 0.06 2E-06 47.3 8.9 85 173-291 10-99 (138)
265 3tnl_A Shikimate dehydrogenase 95.4 0.035 1.2E-06 55.7 8.3 77 174-255 151-236 (315)
266 3o26_A Salutaridine reductase; 95.4 0.12 4.2E-06 49.9 12.0 76 175-256 10-102 (311)
267 4g81_D Putative hexonate dehyd 95.4 0.12 4E-06 50.2 11.8 148 176-347 8-187 (255)
268 1spx_A Short-chain reductase f 95.4 0.052 1.8E-06 52.2 9.2 78 175-256 4-97 (278)
269 2z1m_A GDP-D-mannose dehydrata 95.4 0.03 1E-06 55.0 7.7 112 176-294 2-126 (345)
270 4f6c_A AUSA reductase domain p 95.4 0.031 1.1E-06 57.4 8.1 116 173-294 65-196 (427)
271 3gvp_A Adenosylhomocysteinase 95.4 0.049 1.7E-06 56.9 9.5 94 173-297 216-310 (435)
272 3l77_A Short-chain alcohol deh 95.4 0.1 3.5E-06 48.8 11.0 75 177-257 2-92 (235)
273 3q2i_A Dehydrogenase; rossmann 95.4 0.02 7E-07 57.6 6.5 69 175-253 11-83 (354)
274 2o23_A HADH2 protein; HSD17B10 95.4 0.086 2.9E-06 50.0 10.6 73 175-256 10-97 (265)
275 2rir_A Dipicolinate synthase, 95.4 0.042 1.4E-06 54.3 8.6 97 173-298 153-251 (300)
276 1cyd_A Carbonyl reductase; sho 95.4 0.16 5.4E-06 47.5 12.3 111 175-295 5-136 (244)
277 1w6u_A 2,4-dienoyl-COA reducta 95.3 0.17 5.8E-06 49.0 12.9 117 174-295 23-164 (302)
278 3tfo_A Putative 3-oxoacyl-(acy 95.3 0.12 4E-06 50.0 11.6 112 176-295 3-140 (264)
279 3ak4_A NADH-dependent quinucli 95.3 0.14 4.8E-06 48.8 12.1 111 175-294 10-145 (263)
280 3euw_A MYO-inositol dehydrogen 95.3 0.019 6.5E-07 57.5 6.1 67 176-253 3-73 (344)
281 3ai3_A NADPH-sorbose reductase 95.3 0.13 4.4E-06 49.0 11.6 114 175-295 5-144 (263)
282 1yxm_A Pecra, peroxisomal tran 95.3 0.098 3.3E-06 50.9 10.9 82 173-256 14-111 (303)
283 2pd6_A Estradiol 17-beta-dehyd 95.3 0.077 2.6E-06 50.3 10.0 47 174-222 4-51 (264)
284 1e7w_A Pteridine reductase; di 95.3 0.2 6.9E-06 48.8 13.2 47 175-223 7-55 (291)
285 2bgk_A Rhizome secoisolaricire 95.3 0.16 5.3E-06 48.5 12.1 112 175-295 14-153 (278)
286 3sju_A Keto reductase; short-c 95.3 0.17 5.7E-06 49.1 12.4 77 174-257 21-113 (279)
287 2a35_A Hypothetical protein PA 95.3 0.013 4.5E-07 53.6 4.3 102 177-294 5-113 (215)
288 3a28_C L-2.3-butanediol dehydr 95.2 0.14 4.7E-06 48.8 11.6 111 178-295 3-141 (258)
289 4dry_A 3-oxoacyl-[acyl-carrier 95.2 0.14 4.6E-06 49.9 11.7 116 175-295 31-173 (281)
290 3ucx_A Short chain dehydrogena 95.2 0.16 5.3E-06 48.7 12.0 114 174-295 8-147 (264)
291 4ina_A Saccharopine dehydrogen 95.2 0.02 6.8E-07 59.3 5.9 76 177-254 1-85 (405)
292 4b4o_A Epimerase family protei 95.2 0.049 1.7E-06 52.9 8.4 89 178-285 1-97 (298)
293 2uvd_A 3-oxoacyl-(acyl-carrier 95.2 0.1 3.5E-06 49.3 10.5 113 176-296 3-142 (246)
294 1xq1_A Putative tropinone redu 95.2 0.17 5.7E-06 48.1 12.1 114 175-296 12-152 (266)
295 3cxt_A Dehydrogenase with diff 95.2 0.15 5E-06 49.9 11.8 114 175-295 32-170 (291)
296 3f9i_A 3-oxoacyl-[acyl-carrier 95.1 0.11 3.8E-06 49.0 10.6 115 173-296 10-144 (249)
297 4da9_A Short-chain dehydrogena 95.1 0.25 8.5E-06 47.9 13.3 115 175-296 27-172 (280)
298 3oec_A Carveol dehydrogenase ( 95.1 0.17 5.9E-06 50.0 12.3 115 174-295 43-195 (317)
299 2hq1_A Glucose/ribitol dehydro 95.1 0.13 4.3E-06 48.3 10.8 113 176-296 4-143 (247)
300 3f1l_A Uncharacterized oxidore 95.1 0.27 9.3E-06 46.6 13.3 117 174-295 9-152 (252)
301 3jtm_A Formate dehydrogenase, 95.1 0.15 5E-06 52.0 11.9 118 152-295 132-257 (351)
302 3d0o_A L-LDH 1, L-lactate dehy 95.1 0.0033 1.1E-07 63.1 -0.4 32 131-162 7-38 (317)
303 1mx3_A CTBP1, C-terminal bindi 95.1 0.11 3.7E-06 52.8 10.8 117 152-295 131-260 (347)
304 3nep_X Malate dehydrogenase; h 95.1 0.0027 9.4E-08 63.8 -1.0 32 131-162 1-32 (314)
305 2x6t_A ADP-L-glycero-D-manno-h 95.1 0.051 1.7E-06 54.1 8.3 111 175-294 44-162 (357)
306 1vl8_A Gluconate 5-dehydrogena 95.1 0.24 8.3E-06 47.6 12.9 116 173-295 17-158 (267)
307 3h8v_A Ubiquitin-like modifier 95.1 0.097 3.3E-06 52.0 10.2 37 175-212 34-70 (292)
308 3gvc_A Oxidoreductase, probabl 95.1 0.23 7.9E-06 48.1 12.8 112 175-295 27-162 (277)
309 1qp8_A Formate dehydrogenase; 95.1 0.085 2.9E-06 52.5 9.8 112 152-295 95-211 (303)
310 2b4q_A Rhamnolipids biosynthes 95.0 0.19 6.4E-06 48.6 12.1 113 175-295 27-168 (276)
311 1tlt_A Putative oxidoreductase 95.0 0.018 6.1E-07 57.1 4.8 68 175-253 3-73 (319)
312 4ibo_A Gluconate dehydrogenase 95.0 0.13 4.6E-06 49.6 11.0 113 175-295 24-162 (271)
313 3qvo_A NMRA family protein; st 95.0 0.058 2E-06 50.6 8.1 98 173-295 19-125 (236)
314 2bd0_A Sepiapterin reductase; 95.0 0.13 4.5E-06 48.1 10.5 114 177-296 2-146 (244)
315 1xkq_A Short-chain reductase f 95.0 0.18 6E-06 48.7 11.7 78 175-256 4-97 (280)
316 2qhx_A Pteridine reductase 1; 95.0 0.25 8.6E-06 49.2 13.1 47 175-223 44-92 (328)
317 1ae1_A Tropinone reductase-I; 95.0 0.35 1.2E-05 46.5 13.7 114 175-296 19-159 (273)
318 1pjc_A Protein (L-alanine dehy 95.0 0.044 1.5E-06 55.7 7.6 75 175-257 165-242 (361)
319 3evt_A Phosphoglycerate dehydr 95.0 0.022 7.6E-07 57.4 5.3 116 152-295 107-228 (324)
320 3h7a_A Short chain dehydrogena 95.0 0.18 6E-06 48.1 11.5 112 175-294 5-141 (252)
321 3tzq_B Short-chain type dehydr 95.0 0.2 6.7E-06 48.3 11.9 113 174-295 8-146 (271)
322 2z1n_A Dehydrogenase; reductas 94.9 0.21 7.2E-06 47.5 12.0 115 175-295 5-144 (260)
323 3cea_A MYO-inositol 2-dehydrog 94.9 0.032 1.1E-06 55.7 6.3 70 174-253 5-79 (346)
324 2yut_A Putative short-chain ox 94.9 0.066 2.3E-06 48.7 8.0 105 178-296 1-122 (207)
325 4hv4_A UDP-N-acetylmuramate--L 94.9 0.1 3.4E-06 55.4 10.5 71 177-257 22-93 (494)
326 3ftp_A 3-oxoacyl-[acyl-carrier 94.9 0.2 6.9E-06 48.3 11.8 115 175-295 26-164 (270)
327 1sb8_A WBPP; epimerase, 4-epim 94.9 0.049 1.7E-06 54.1 7.6 114 175-294 25-152 (352)
328 4imr_A 3-oxoacyl-(acyl-carrier 94.9 0.2 7E-06 48.4 11.9 114 175-295 31-168 (275)
329 1hdc_A 3-alpha, 20 beta-hydrox 94.9 0.15 5E-06 48.6 10.7 111 175-295 3-138 (254)
330 3fbt_A Chorismate mutase and s 94.9 0.04 1.4E-06 54.5 6.8 69 175-255 120-188 (282)
331 2ho3_A Oxidoreductase, GFO/IDH 94.9 0.019 6.5E-07 57.1 4.5 67 177-253 1-70 (325)
332 1y6j_A L-lactate dehydrogenase 94.9 0.0041 1.4E-07 62.5 -0.5 32 131-162 8-39 (318)
333 3e48_A Putative nucleoside-dip 94.8 0.11 3.7E-06 50.0 9.7 97 178-294 1-105 (289)
334 3v8b_A Putative dehydrogenase, 94.8 0.28 9.6E-06 47.6 12.8 112 176-295 27-165 (283)
335 3ijr_A Oxidoreductase, short c 94.8 0.32 1.1E-05 47.3 13.3 115 174-295 44-183 (291)
336 2yq5_A D-isomer specific 2-hyd 94.8 0.085 2.9E-06 53.6 9.3 134 131-294 92-236 (343)
337 1gpj_A Glutamyl-tRNA reductase 94.8 0.033 1.1E-06 57.6 6.3 73 175-256 165-238 (404)
338 2d1y_A Hypothetical protein TT 94.8 0.29 9.8E-06 46.5 12.5 108 175-295 4-136 (256)
339 2hun_A 336AA long hypothetical 94.8 0.046 1.6E-06 53.7 7.0 112 176-294 2-126 (336)
340 2ph3_A 3-oxoacyl-[acyl carrier 94.8 0.12 4.2E-06 48.2 9.7 113 178-296 2-140 (245)
341 2nwq_A Probable short-chain de 94.8 0.16 5.6E-06 49.1 10.9 110 178-295 22-158 (272)
342 4f3y_A DHPR, dihydrodipicolina 94.8 0.027 9.1E-07 55.4 5.2 74 175-253 5-81 (272)
343 2pnf_A 3-oxoacyl-[acyl-carrier 94.8 0.11 3.6E-06 48.7 9.2 113 175-294 5-143 (248)
344 3ec7_A Putative dehydrogenase; 94.8 0.034 1.2E-06 56.3 6.1 72 173-253 19-95 (357)
345 2c5a_A GDP-mannose-3', 5'-epim 94.8 0.08 2.7E-06 53.4 8.9 107 176-294 28-144 (379)
346 3d4o_A Dipicolinate synthase s 94.8 0.069 2.4E-06 52.5 8.2 98 173-299 151-250 (293)
347 3oig_A Enoyl-[acyl-carrier-pro 94.8 0.46 1.6E-05 45.1 13.9 116 175-295 5-148 (266)
348 3rui_A Ubiquitin-like modifier 94.8 0.047 1.6E-06 55.4 7.1 58 154-212 7-68 (340)
349 3d3w_A L-xylulose reductase; u 94.8 0.21 7.3E-06 46.6 11.3 113 175-296 5-137 (244)
350 1xhl_A Short-chain dehydrogena 94.8 0.26 9E-06 48.2 12.4 114 175-294 24-165 (297)
351 3db2_A Putative NADPH-dependen 94.7 0.025 8.6E-07 56.9 5.0 68 175-253 3-74 (354)
352 3ko8_A NAD-dependent epimerase 94.7 0.12 4.1E-06 50.1 9.8 103 178-294 1-112 (312)
353 3n74_A 3-ketoacyl-(acyl-carrie 94.7 0.15 5E-06 48.5 10.2 112 175-295 7-147 (261)
354 1gdh_A D-glycerate dehydrogena 94.7 0.18 6.1E-06 50.5 11.2 88 152-253 113-210 (320)
355 3h5n_A MCCB protein; ubiquitin 94.7 0.081 2.8E-06 53.8 8.8 74 176-253 117-216 (353)
356 2z2v_A Hypothetical protein PH 94.7 0.0059 2E-07 62.5 0.3 66 176-253 15-85 (365)
357 2cfc_A 2-(R)-hydroxypropyl-COM 94.7 0.2 6.7E-06 47.0 11.0 112 177-295 2-142 (250)
358 2vhw_A Alanine dehydrogenase; 94.7 0.037 1.2E-06 56.8 6.3 76 174-257 165-243 (377)
359 4g2n_A D-isomer specific 2-hyd 94.7 0.17 5.8E-06 51.4 11.1 116 152-295 140-264 (345)
360 3st7_A Capsular polysaccharide 94.7 0.024 8.4E-07 56.9 4.9 90 178-294 1-93 (369)
361 2j6i_A Formate dehydrogenase; 94.7 0.16 5.3E-06 51.9 10.9 118 152-295 132-258 (364)
362 1gy8_A UDP-galactose 4-epimera 94.7 0.18 6.1E-06 50.7 11.3 114 177-294 2-143 (397)
363 1wwk_A Phosphoglycerate dehydr 94.7 0.12 4.3E-06 51.3 10.0 87 152-253 112-204 (307)
364 4had_A Probable oxidoreductase 94.7 0.036 1.2E-06 55.5 6.0 69 175-253 21-94 (350)
365 4dyv_A Short-chain dehydrogena 94.7 0.15 5.3E-06 49.3 10.5 113 175-295 26-164 (272)
366 1nff_A Putative oxidoreductase 94.7 0.2 6.8E-06 47.9 11.1 111 175-295 5-140 (260)
367 2ehd_A Oxidoreductase, oxidore 94.7 0.18 6.2E-06 46.9 10.6 109 177-295 5-137 (234)
368 2rh8_A Anthocyanidin reductase 94.7 0.11 3.8E-06 51.0 9.6 112 177-294 9-130 (338)
369 2c07_A 3-oxoacyl-(acyl-carrier 94.7 0.14 5E-06 49.5 10.2 115 174-296 41-181 (285)
370 3tpc_A Short chain alcohol deh 94.7 0.13 4.5E-06 48.9 9.8 114 175-296 5-151 (257)
371 2c29_D Dihydroflavonol 4-reduc 94.7 0.074 2.5E-06 52.4 8.2 116 176-294 4-127 (337)
372 2a9f_A Putative malic enzyme ( 94.7 0.017 5.7E-07 59.8 3.5 119 173-319 184-311 (398)
373 1leh_A Leucine dehydrogenase; 94.7 0.08 2.8E-06 54.2 8.6 67 174-253 170-238 (364)
374 3op4_A 3-oxoacyl-[acyl-carrier 94.7 0.19 6.4E-06 47.7 10.7 111 175-294 7-141 (248)
375 2a4k_A 3-oxoacyl-[acyl carrier 94.6 0.3 1E-05 46.8 12.3 113 175-297 4-139 (263)
376 2wsb_A Galactitol dehydrogenas 94.6 0.23 7.7E-06 46.7 11.2 112 175-295 9-144 (254)
377 2g76_A 3-PGDH, D-3-phosphoglyc 94.6 0.16 5.5E-06 51.3 10.7 116 152-295 135-256 (335)
378 2pzm_A Putative nucleotide sug 94.6 0.05 1.7E-06 53.7 6.8 109 173-294 16-135 (330)
379 3vps_A TUNA, NAD-dependent epi 94.6 0.064 2.2E-06 52.0 7.5 110 176-294 6-118 (321)
380 3rih_A Short chain dehydrogena 94.6 0.17 5.9E-06 49.6 10.7 113 175-294 39-177 (293)
381 1x1t_A D(-)-3-hydroxybutyrate 94.6 0.13 4.4E-06 49.1 9.5 113 176-295 3-142 (260)
382 1ydw_A AX110P-like protein; st 94.6 0.05 1.7E-06 54.9 6.9 73 175-253 4-79 (362)
383 3rc1_A Sugar 3-ketoreductase; 94.6 0.033 1.1E-06 56.2 5.4 70 173-253 23-97 (350)
384 3tox_A Short chain dehydrogena 94.6 0.17 5.9E-06 49.1 10.5 113 175-295 6-145 (280)
385 3e9m_A Oxidoreductase, GFO/IDH 94.6 0.028 9.7E-07 56.1 5.0 69 175-253 3-75 (330)
386 1edo_A Beta-keto acyl carrier 94.6 0.14 4.8E-06 47.8 9.5 111 178-296 2-139 (244)
387 1lu9_A Methylene tetrahydromet 94.6 0.11 3.7E-06 50.8 9.0 77 175-256 117-199 (287)
388 1eq2_A ADP-L-glycero-D-mannohe 94.6 0.074 2.5E-06 51.4 7.8 107 179-294 1-115 (310)
389 4dqv_A Probable peptide synthe 94.6 0.17 5.8E-06 53.0 11.1 119 173-294 69-214 (478)
390 3m1a_A Putative dehydrogenase; 94.6 0.1 3.5E-06 50.2 8.7 111 176-295 4-138 (281)
391 2pi1_A D-lactate dehydrogenase 94.6 0.089 3E-06 53.2 8.6 115 152-295 110-231 (334)
392 3n58_A Adenosylhomocysteinase; 94.6 0.093 3.2E-06 55.1 8.9 93 173-296 243-336 (464)
393 2q2v_A Beta-D-hydroxybutyrate 94.5 0.16 5.5E-06 48.2 10.0 111 175-295 2-138 (255)
394 3grp_A 3-oxoacyl-(acyl carrier 94.5 0.19 6.5E-06 48.4 10.6 112 175-296 25-161 (266)
395 3v2h_A D-beta-hydroxybutyrate 94.5 0.33 1.1E-05 47.0 12.4 115 174-295 22-163 (281)
396 3c1a_A Putative oxidoreductase 94.5 0.032 1.1E-06 55.2 5.1 66 176-253 9-77 (315)
397 2aef_A Calcium-gated potassium 94.5 0.021 7.1E-07 53.9 3.5 95 176-298 8-110 (234)
398 1ff9_A Saccharopine reductase; 94.5 0.0089 3.1E-07 62.9 1.0 72 175-255 1-78 (450)
399 3guy_A Short-chain dehydrogena 94.5 0.25 8.7E-06 46.0 11.0 43 178-222 2-45 (230)
400 4dqx_A Probable oxidoreductase 94.4 0.39 1.3E-05 46.4 12.7 111 175-295 25-160 (277)
401 1zmt_A Haloalcohol dehalogenas 94.4 0.1 3.6E-06 49.6 8.4 111 178-295 2-132 (254)
402 3r3s_A Oxidoreductase; structu 94.4 0.4 1.4E-05 46.8 12.8 115 174-295 46-186 (294)
403 2x9g_A PTR1, pteridine reducta 94.4 0.37 1.3E-05 46.6 12.4 47 175-223 21-69 (288)
404 1xea_A Oxidoreductase, GFO/IDH 94.4 0.037 1.3E-06 54.9 5.4 68 177-253 2-71 (323)
405 4h3v_A Oxidoreductase domain p 94.4 0.02 6.9E-07 57.6 3.4 72 173-253 2-83 (390)
406 2dc1_A L-aspartate dehydrogena 94.4 0.03 1E-06 53.2 4.5 55 178-253 1-58 (236)
407 2eez_A Alanine dehydrogenase; 94.4 0.041 1.4E-06 56.1 5.7 74 175-256 164-240 (369)
408 1rkx_A CDP-glucose-4,6-dehydra 94.4 0.039 1.3E-06 54.9 5.4 112 176-294 8-131 (357)
409 4e5n_A Thermostable phosphite 94.4 0.14 4.8E-06 51.6 9.6 117 152-295 113-237 (330)
410 3edm_A Short chain dehydrogena 94.4 0.22 7.4E-06 47.6 10.5 114 175-294 6-143 (259)
411 1oju_A MDH, malate dehydrogena 94.3 0.006 2.1E-07 60.7 -0.7 32 131-162 1-32 (294)
412 3fr7_A Putative ketol-acid red 94.3 0.036 1.2E-06 58.9 5.1 68 178-253 55-129 (525)
413 4fc7_A Peroxisomal 2,4-dienoyl 94.3 0.3 1E-05 47.1 11.5 116 174-296 24-165 (277)
414 2d4a_B Malate dehydrogenase; a 94.3 0.007 2.4E-07 60.5 -0.3 30 132-162 1-30 (308)
415 3hg7_A D-isomer specific 2-hyd 94.3 0.073 2.5E-06 53.6 7.2 116 152-295 112-231 (324)
416 1f06_A MESO-diaminopimelate D- 94.3 0.029 1E-06 56.1 4.3 65 175-253 1-66 (320)
417 1uls_A Putative 3-oxoacyl-acyl 94.3 0.28 9.4E-06 46.4 11.0 109 176-295 4-136 (245)
418 3v2g_A 3-oxoacyl-[acyl-carrier 94.3 0.64 2.2E-05 44.7 13.8 116 174-295 28-166 (271)
419 4hkt_A Inositol 2-dehydrogenas 94.3 0.04 1.4E-06 54.8 5.2 65 177-253 3-71 (331)
420 1ja9_A 4HNR, 1,3,6,8-tetrahydr 94.3 0.16 5.5E-06 48.2 9.3 114 175-295 19-156 (274)
421 1qyd_A Pinoresinol-lariciresin 94.3 0.058 2E-06 52.4 6.3 72 177-256 4-87 (313)
422 4dio_A NAD(P) transhydrogenase 94.3 0.051 1.8E-06 56.4 6.1 42 174-217 187-228 (405)
423 3s55_A Putative short-chain de 94.2 0.53 1.8E-05 45.2 13.1 114 174-295 7-158 (281)
424 3ezy_A Dehydrogenase; structur 94.2 0.038 1.3E-06 55.4 5.0 67 177-253 2-72 (344)
425 1v8b_A Adenosylhomocysteinase; 94.2 0.037 1.2E-06 58.7 5.0 93 173-296 253-346 (479)
426 1h5q_A NADP-dependent mannitol 94.2 0.22 7.5E-06 47.0 10.1 115 175-295 12-152 (265)
427 3p2y_A Alanine dehydrogenase/p 94.2 0.091 3.1E-06 54.1 7.8 81 174-257 181-277 (381)
428 1y8q_A Ubiquitin-like 1 activa 94.2 0.19 6.6E-06 50.8 10.1 75 175-253 34-133 (346)
429 3lk7_A UDP-N-acetylmuramoylala 94.2 0.11 3.9E-06 54.2 8.6 76 175-257 7-84 (451)
430 3oid_A Enoyl-[acyl-carrier-pro 94.2 0.51 1.8E-05 45.0 12.7 112 176-295 3-141 (258)
431 1g0o_A Trihydroxynaphthalene r 94.1 0.3 1E-05 47.1 11.1 114 176-295 28-164 (283)
432 1ldn_A L-lactate dehydrogenase 94.1 0.008 2.7E-07 60.2 -0.3 32 131-162 7-38 (316)
433 2nac_A NAD-dependent formate d 94.1 0.088 3E-06 54.4 7.5 96 174-295 188-284 (393)
434 3afn_B Carbonyl reductase; alp 94.1 0.21 7.3E-06 46.8 9.8 74 175-255 5-95 (258)
435 3kkj_A Amine oxidase, flavin-c 94.1 0.034 1.2E-06 50.3 4.0 33 178-212 3-35 (336)
436 2axq_A Saccharopine dehydrogen 94.1 0.046 1.6E-06 57.8 5.5 70 175-254 21-97 (467)
437 3ctm_A Carbonyl reductase; alc 94.1 0.14 4.7E-06 49.2 8.5 114 175-295 32-172 (279)
438 2ydy_A Methionine adenosyltran 94.1 0.066 2.3E-06 52.1 6.3 102 177-294 2-109 (315)
439 1yo6_A Putative carbonyl reduc 94.1 0.13 4.4E-06 47.9 8.1 42 176-217 2-44 (250)
440 1yde_A Retinal dehydrogenase/r 94.1 0.3 1E-05 47.0 10.8 109 175-295 7-141 (270)
441 3dii_A Short-chain dehydrogena 94.1 0.21 7.3E-06 47.2 9.7 106 178-295 3-133 (247)
442 2q1s_A Putative nucleotide sug 94.0 0.092 3.1E-06 52.8 7.4 108 175-294 30-150 (377)
443 3i6i_A Putative leucoanthocyan 94.0 0.17 5.8E-06 50.2 9.2 90 175-285 8-110 (346)
444 1ygy_A PGDH, D-3-phosphoglycer 94.0 0.15 5.1E-06 54.6 9.2 87 152-253 112-204 (529)
445 1sby_A Alcohol dehydrogenase; 94.0 0.46 1.6E-05 44.8 11.8 112 175-295 3-138 (254)
446 2q1w_A Putative nucleotide sug 94.0 0.067 2.3E-06 52.8 6.1 108 174-294 18-136 (333)
447 4gsl_A Ubiquitin-like modifier 93.9 0.081 2.8E-06 57.6 7.1 75 175-253 324-439 (615)
448 1sny_A Sniffer CG10964-PA; alp 93.9 0.28 9.6E-06 46.5 10.3 79 173-257 17-114 (267)
449 3uf0_A Short-chain dehydrogena 93.9 0.39 1.3E-05 46.3 11.4 112 175-295 29-165 (273)
450 4fb5_A Probable oxidoreductase 93.9 0.063 2.2E-06 54.0 5.9 72 173-253 21-102 (393)
451 1xu9_A Corticosteroid 11-beta- 93.9 0.32 1.1E-05 47.0 10.7 48 175-224 26-74 (286)
452 2ixa_A Alpha-N-acetylgalactosa 93.9 0.092 3.2E-06 54.7 7.2 75 174-253 17-99 (444)
453 2ag5_A DHRS6, dehydrogenase/re 93.9 0.19 6.6E-06 47.4 8.9 109 175-295 4-133 (246)
454 4egb_A DTDP-glucose 4,6-dehydr 93.8 0.079 2.7E-06 52.3 6.4 114 175-294 22-148 (346)
455 3rd5_A Mypaa.01249.C; ssgcid, 93.8 0.18 6.1E-06 49.0 8.8 111 174-295 13-139 (291)
456 1h6d_A Precursor form of gluco 93.8 0.064 2.2E-06 55.8 5.8 75 173-253 79-158 (433)
457 1ek6_A UDP-galactose 4-epimera 93.8 0.16 5.3E-06 50.1 8.4 113 177-294 2-131 (348)
458 1sc6_A PGDH, D-3-phosphoglycer 93.8 0.26 9E-06 51.0 10.4 116 153-298 116-239 (404)
459 4iiu_A 3-oxoacyl-[acyl-carrier 93.8 0.5 1.7E-05 45.1 11.8 117 174-295 23-164 (267)
460 4hb9_A Similarities with proba 93.8 0.044 1.5E-06 54.9 4.4 34 177-212 1-34 (412)
461 3k31_A Enoyl-(acyl-carrier-pro 93.8 0.7 2.4E-05 45.0 13.0 114 175-295 28-169 (296)
462 3evn_A Oxidoreductase, GFO/IDH 93.8 0.025 8.4E-07 56.5 2.5 70 175-253 3-75 (329)
463 3sc4_A Short chain dehydrogena 93.8 0.6 2E-05 45.2 12.5 114 175-295 7-152 (285)
464 2duw_A Putative COA-binding pr 93.8 0.11 3.6E-06 46.0 6.4 61 177-253 13-78 (145)
465 3rku_A Oxidoreductase YMR226C; 93.7 0.52 1.8E-05 45.9 12.0 116 176-295 32-175 (287)
466 4e3z_A Putative oxidoreductase 93.7 0.35 1.2E-05 46.3 10.6 113 176-295 25-167 (272)
467 2gas_A Isoflavone reductase; N 93.7 0.031 1.1E-06 54.2 3.1 71 177-255 2-86 (307)
468 3sc6_A DTDP-4-dehydrorhamnose 93.7 0.15 5.3E-06 48.7 8.0 94 178-294 6-105 (287)
469 1iuk_A Hypothetical protein TT 93.7 0.2 6.8E-06 44.0 8.1 110 176-321 12-126 (140)
470 3don_A Shikimate dehydrogenase 93.7 0.03 1E-06 55.1 3.0 69 175-254 115-184 (277)
471 3mz0_A Inositol 2-dehydrogenas 93.7 0.064 2.2E-06 53.7 5.5 68 177-253 2-74 (344)
472 1zmo_A Halohydrin dehalogenase 93.6 0.075 2.6E-06 50.3 5.6 108 178-295 2-134 (244)
473 1oc2_A DTDP-glucose 4,6-dehydr 93.6 0.16 5.6E-06 49.9 8.3 112 177-294 4-124 (348)
474 4dmm_A 3-oxoacyl-[acyl-carrier 93.6 0.54 1.8E-05 45.2 11.8 112 175-294 26-164 (269)
475 1i24_A Sulfolipid biosynthesis 93.6 0.11 3.9E-06 52.2 7.2 117 173-294 7-154 (404)
476 2bll_A Protein YFBG; decarboxy 93.6 0.11 3.8E-06 50.9 7.0 106 178-295 1-117 (345)
477 3hn7_A UDP-N-acetylmuramate-L- 93.6 0.21 7.1E-06 53.4 9.5 130 176-317 18-156 (524)
478 2wm3_A NMRA-like family domain 93.6 0.27 9.3E-06 47.4 9.6 102 177-294 5-114 (299)
479 3grk_A Enoyl-(acyl-carrier-pro 93.6 0.72 2.5E-05 44.9 12.7 115 174-295 28-170 (293)
480 1rpn_A GDP-mannose 4,6-dehydra 93.6 0.084 2.9E-06 51.7 6.0 113 175-294 12-137 (335)
481 3u3x_A Oxidoreductase; structu 93.6 0.12 4.1E-06 52.3 7.3 70 174-253 23-96 (361)
482 4iin_A 3-ketoacyl-acyl carrier 93.6 0.48 1.6E-05 45.3 11.3 113 175-294 27-165 (271)
483 2pk3_A GDP-6-deoxy-D-LYXO-4-he 93.6 0.15 5.1E-06 49.6 7.8 106 174-294 9-125 (321)
484 3d64_A Adenosylhomocysteinase; 93.5 0.072 2.4E-06 56.7 5.7 67 173-253 273-340 (494)
485 3e03_A Short chain dehydrogena 93.5 0.64 2.2E-05 44.6 12.2 115 175-297 4-151 (274)
486 3kvo_A Hydroxysteroid dehydrog 93.5 0.73 2.5E-05 46.3 13.0 117 173-297 41-190 (346)
487 1qyc_A Phenylcoumaran benzylic 93.5 0.11 3.9E-06 50.2 6.7 71 177-255 4-87 (308)
488 3upl_A Oxidoreductase; rossman 93.5 0.15 5.2E-06 53.5 8.0 81 174-254 20-116 (446)
489 3ay3_A NAD-dependent epimerase 93.5 0.065 2.2E-06 51.1 4.8 99 178-294 3-109 (267)
490 1nvm_B Acetaldehyde dehydrogen 93.5 0.054 1.9E-06 54.2 4.4 70 176-254 3-80 (312)
491 3hhp_A Malate dehydrogenase; M 93.5 0.012 3.9E-07 59.2 -0.5 42 131-172 1-46 (312)
492 4fgs_A Probable dehydrogenase 93.5 0.53 1.8E-05 46.0 11.5 148 175-348 27-202 (273)
493 3k5p_A D-3-phosphoglycerate de 93.4 0.35 1.2E-05 50.3 10.6 116 153-298 127-250 (416)
494 3ehe_A UDP-glucose 4-epimerase 93.4 0.039 1.3E-06 53.8 3.2 109 177-294 1-113 (313)
495 3is3_A 17BETA-hydroxysteroid d 93.4 0.54 1.9E-05 45.0 11.3 117 173-295 14-153 (270)
496 3c1o_A Eugenol synthase; pheny 93.4 0.041 1.4E-06 53.8 3.3 72 176-255 3-87 (321)
497 3qlj_A Short chain dehydrogena 93.4 0.31 1E-05 48.2 9.7 76 175-257 25-126 (322)
498 2p4h_X Vestitone reductase; NA 93.3 0.13 4.5E-06 49.9 7.0 108 178-294 2-124 (322)
499 5mdh_A Malate dehydrogenase; o 93.3 0.0064 2.2E-07 61.6 -2.7 42 131-172 4-56 (333)
500 2ekl_A D-3-phosphoglycerate de 93.3 0.21 7E-06 49.9 8.4 87 152-253 114-204 (313)
No 1
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=100.00 E-value=1.9e-69 Score=552.90 Aligned_cols=315 Identities=58% Similarity=1.009 Sum_probs=298.3
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEe
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIIT 252 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIit 252 (488)
...+.+||+|||||.||+++++.|+.+++.++|+|+|++++++++.++||+|+..+....++..++||++++|||+||++
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~~~~aDiVvi~ 94 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSVTANSKLVIIT 94 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGGGTTEEEEEEC
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHHhCCCCEEEEc
Confidence 45678899999999999999999999999899999999999999999999998655556678778899999999999999
Q ss_pred cccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHH
Q psy12825 253 AGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLA 332 (488)
Q Consensus 253 ag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA 332 (488)
+|.|++||++|.|++.+|+++++++++.|+++||++|++++|||+|++|++++++++||++||||+||.||+.|+++++|
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvdi~t~~~~k~sg~p~~rviG~gt~LD~~R~~~~la 174 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMG 174 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHH
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHHHHHHhCCCHHHEEeeccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHH
Q psy12825 333 QKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLS 412 (488)
Q Consensus 333 ~~Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a 412 (488)
+++|++|++|+++||||||++++|+||+++++|+|+.++.+..+..+++++|+++.+++++++++|++.||+++|++|++
T Consensus 175 ~~lgv~~~~V~~~ViGeHG~s~vp~~S~~~v~G~p~~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~kg~t~~a~a~a 254 (331)
T 4aj2_A 175 ERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLS 254 (331)
T ss_dssp HHHTSCGGGCBCCEEBCSSTTCEECGGGCEETTEEHHHHCTTTTSTTCTTCTHHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred HHhCCCHHHCEEeEEecCCCceeEeeecCeECCEEHHHHHhhccCCCCHHHHHHHHHHHHHhHHHHhhcCCCCchhHHHH
Confidence 99999999999999999999999999999999999999876543345677899999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 413 VASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 413 ~~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++++++|++|++.++|+|++++|+||+++++|||+||++|++|++++++++|+++|+++|++|++.|+++++++
T Consensus 255 ~a~~~~ail~d~~~~~~vs~~~~g~ygi~~~v~~s~P~~lg~~Gv~~iv~l~L~~~E~~~l~~s~~~l~~~~~~~ 329 (331)
T 4aj2_A 255 VADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKEL 329 (331)
T ss_dssp HHHHHHHHHTTCCEEEEEEEECTTGGGCCSCCEEEEEEEEETTEEEEEECCCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCeEEEEEecCCccCCcCceEEEEEEEEcCCeeEEEccCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999998999999999999999999999999999999999999999988875
No 2
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=100.00 E-value=9.7e-67 Score=531.94 Aligned_cols=310 Identities=39% Similarity=0.709 Sum_probs=270.2
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
.+++||+|||||.||+++++.|+.+++.++|+|+|++++++++.++||+|...+....++ .+++|++++|||+||+++|
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i-~~~~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKI-YSAEYSDAKDADLVVITAG 85 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEE-EECCGGGGTTCSEEEECCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEE-EECcHHHhcCCCEEEECCC
Confidence 356899999999999999999999999899999999999999999999998643323333 3567999999999999999
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHH
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQK 334 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~ 334 (488)
.|++||++|.|++.+|+++++++++.|.++||++|++++|||+|++|++++++++||++||||+||.||+.|+++++|++
T Consensus 86 ~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPvdi~t~~~~k~~g~p~~rviG~gt~LD~~R~~~~la~~ 165 (326)
T 3vku_A 86 APQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGSGTSLDTARFRQSIAKM 165 (326)
T ss_dssp CC----------------CHHHHHHHHHTTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHH
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCchHHHHHHHHHhcCCCHHHeeeecccCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHHH
Q psy12825 335 LGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVA 414 (488)
Q Consensus 335 Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~~ 414 (488)
+|++|++|+++||||||++++|+||+++++|+|+.++.+.... +++++++++.+++++++++|++.||+++|++|++++
T Consensus 166 lgv~~~~V~~~ViGeHGdt~vp~~S~a~v~g~pl~~~~~~~~~-~~~~~~~~i~~~v~~~g~eIi~~kG~t~~a~a~a~~ 244 (326)
T 3vku_A 166 VNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPE-IKEDKLVKMFEDVRNKAYEIIKLKGATFYGIATALA 244 (326)
T ss_dssp HTSCGGGEECCEEBSSSTTCEECGGGCEETTEEHHHHHHHCTT-SCHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred hCCCHHHCeEEEEcCCCCeeEEeeeccccCCEEHHHHhccccC-CCHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 9999999999999999999999999999999999887643211 356778999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 415 SISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 415 ~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++++|+++++.++|+|++++|+||++ |+|||+||++|++|++++++++|+++|+++|++|+++|++.++.+
T Consensus 245 ~~~~ail~~~~~v~~~s~~~~g~yg~~-~v~~s~P~~lg~~Gv~~iv~l~L~~~E~~~l~~sa~~L~~~~~~~ 316 (326)
T 3vku_A 245 RISKAILNDENAVLPLSVYMDGQYGLN-DIYIGTPAVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDA 316 (326)
T ss_dssp HHHHHHHTTCCEEEEEEEEEEEGGGEE-EEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHhcCCCceEEEEeeccCccCCC-ceEEEEEEEEcCCceEEEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999996 899999999999999999999999999999999999999776543
No 3
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=100.00 E-value=9.1e-66 Score=525.10 Aligned_cols=309 Identities=39% Similarity=0.696 Sum_probs=288.7
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCC-CCCcEEEcCCccccCCCcEEEEecc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL-RSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~-~~~~v~~ttd~eal~dADiVIitag 254 (488)
+.+||+|||+|.||+++++.|+..++.++|+|+|++++++++.++||+|...+. ...++ .++++++++|||+||+++|
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i-~~~~~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKT-SYGTYEDCKDADIVCICAG 82 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEE-EEECGGGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEE-EeCcHHHhCCCCEEEEecc
Confidence 467999999999999999999999988899999999999999999999984332 22344 3567899999999999999
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHH
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQK 334 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~ 334 (488)
.|++||++|.|++..|+++++++++.|.++||++|++++|||+|++|++++++++||++||||+||.||+.|+++++|++
T Consensus 83 ~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd~~t~~~~k~~g~p~~rviG~gt~LD~~R~~~~la~~ 162 (326)
T 3pqe_A 83 ANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVDILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEY 162 (326)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHH
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHHHHHHHHHHhcCCCHHHEEeeccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHHH
Q psy12825 335 LGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVA 414 (488)
Q Consensus 335 Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~~ 414 (488)
+|++|++|+++||||||++++|+||+++++|+|+.++.+..+. +++++++++.+++++++++|++.||+++|++|++++
T Consensus 163 lgv~~~~V~~~V~GeHG~t~vp~~S~~~v~g~p~~~~~~~~~~-~~~~~~~~i~~~v~~~g~eIi~~kG~t~~a~a~a~~ 241 (326)
T 3pqe_A 163 FGAAPQNVCAHIIGEHGDTELPVWSHANVGGVPVSELVEKNDA-YKQEELDQIVDDVKNAAYHIIEKKGATYYGVAMSLA 241 (326)
T ss_dssp HTCCGGGEECCEEBSSSTTCEECGGGCEETTEEHHHHHHTCTT-SCHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred hCCCHHHceeeeeecCCCceeeeeeeeeECCEEHHHHhhcccC-CCHHHHHHHHHHHHhhhheeeeCCCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999887643221 356778999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 415 SISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 415 ~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++++|+++++.++|+|++++|+||++ |+|||+||++|++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 242 ~~~~ail~~~~~v~~~s~~~~g~yg~~-~v~~s~P~~lg~~Gv~~iv~l~L~~~E~~~l~~s~~~l~~~~~~~ 313 (326)
T 3pqe_A 242 RITKAILHNENSILTVSTYLDGQYGAD-DVYIGVPAVVNRGGIAGITELNLNEKEKEQFLHSAGVLKNILKPH 313 (326)
T ss_dssp HHHHHHHTTCCEEECCEEEEESGGGCE-EEEEECCEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHhcCCCcEEEEEEeeccccCCC-ceEEEEEEEEcCCceEEEecCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999997 899999999999999999999999999999999999999988765
No 4
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=100.00 E-value=1.3e-64 Score=513.61 Aligned_cols=308 Identities=37% Similarity=0.649 Sum_probs=289.9
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccccc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRS 257 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~~~ 257 (488)
+||+|||||++|+++++.|+.+++.+||+|+|++++++++.++|+.|...+....++.. +++++++||||||++++.++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~~~~a~~~aD~Vii~ag~~~ 79 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-GSYGDLEGARAVVLAAGVAQ 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-CCGGGGTTEEEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-CCHHHhCCCCEEEECCCCCC
Confidence 69999999999999999999999989999999999999999999999764434556665 57899999999999999999
Q ss_pred CCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHhCC
Q psy12825 258 LVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGL 337 (488)
Q Consensus 258 k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lgv 337 (488)
+||++|.|++.+|++++++++++|+++||++|+|++|||+|++|+++++++++|++||||+||.||+.|+++++|+++|+
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~gt~LD~~R~~~~la~~lgv 159 (310)
T 2xxj_A 80 RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYALSGLPPGRVVGSGTILDTARFRALLAEYLRV 159 (310)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCGGGEEECTTHHHHHHHHHHHHHHHTS
T ss_pred CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHHHHHcCCCHHHEEecCcchhHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHHHHHH
Q psy12825 338 SPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASIS 417 (488)
Q Consensus 338 ~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~~~ii 417 (488)
+|++|+++||||||++++|+||+++++|.|+.++.++....++++.++++.+++++++++|++.||+++|++|.++++++
T Consensus 160 ~~~~v~~~v~G~HG~t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~t~~~~a~a~~~~~ 239 (310)
T 2xxj_A 160 APQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLV 239 (310)
T ss_dssp CGGGEEEEEEBCSSTTCEEEEEEEEETTEEHHHHHHHTTCCCCHHHHHHHHHHHHTHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred CHHHeEEEEecccCCccccchhhccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHhhHHHHhccCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999998876543323567788999999999999999999999999999999999
Q ss_pred HHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 418 HTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 418 ~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++|++|++.++++|++++|+||+ +|+|||+||++|++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 240 ~ai~~~~~~~~~vs~~~~G~yg~-~~~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 308 (310)
T 2xxj_A 240 RAILTDEKGVYTVSAFTPEVAGV-LEVSLSLPRILGAGGVAGTVYPSLSPEERAALRRSAEILKEAAFAL 308 (310)
T ss_dssp HHHHTTCCEEEEEEEEEEEETTE-EEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCEEEEEEEEcCccCC-ccEEEEEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999 8999999999999999999999999999999999999999988764
No 5
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=9.9e-65 Score=515.33 Aligned_cols=303 Identities=32% Similarity=0.563 Sum_probs=287.0
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCC--hhHHHHHHHHHhhcCCCC-CCCcEEEcCCccccCCCcEEEEe
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSN--EDRCKGEMLDLQHGAPFL-RSPKIESGSDIAMSEGSRIVIIT 252 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~--~e~l~g~~~dL~~~~~~~-~~~~v~~ttd~eal~dADiVIit 252 (488)
+.+||+|||+|.||+++++.++..++ ++|+|+|++ ++++++.++|+.|...+. ...++..++||++++|||+||++
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~-~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIia 85 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKEL-ADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVIT 85 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEe
Confidence 45799999999999999999999998 899999999 889999999999874221 35678888899999999999999
Q ss_pred cccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHH
Q psy12825 253 AGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLA 332 (488)
Q Consensus 253 ag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA 332 (488)
+|.|++||++|.|++.+|+++++++++.|.++||++|++++|||+|++|++++|++|||++||||+||.||+.|+++++|
T Consensus 86 ag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPvd~~t~~~~k~sg~p~~rviG~gt~LD~~R~~~~la 165 (315)
T 3tl2_A 86 AGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDAMTYSVFKEAGFPKERVIGQSGVLDTARFRTFIA 165 (315)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChHHHHHHHHHHhcCCChHHEEeeccCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHH--hcCCcchhhH
Q psy12825 333 QKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIK--LKGYTSWALG 410 (488)
Q Consensus 333 ~~Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~--~kg~t~~s~A 410 (488)
+++|++|++|+++||||||+++||+||+++++|+|+.+++ +++.++++.+++++++++|++ .||+++|++|
T Consensus 166 ~~lgv~~~~v~~~viG~Hg~t~vp~~S~~~v~g~p~~~~~-------~~~~~~~i~~~v~~~g~eii~~~~kgst~~a~a 238 (315)
T 3tl2_A 166 QELNLSVKDITGFVLGGHGDDMVPLVRYSYAGGIPLETLI-------PKERLEAIVERTRKGGGEIVGLLGNGSAYYAPA 238 (315)
T ss_dssp HHHTCCGGGEECCEEBCSGGGCEECGGGCEETTEEGGGTS-------CHHHHHHHHHHHHTHHHHHHHHHSSSCCCHHHH
T ss_pred HHhCcCHHHceeeEecCCCCcceeecccCeECCEEHHHhC-------CHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHH
Confidence 9999999999999999999999999999999999998864 366788999999999999999 7899999999
Q ss_pred HHHHHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 411 LSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 411 ~a~~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++++++++|+++++.++|++++++|+||+ +|+|||+||+++++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 239 ~a~~~~~~ail~~~~~v~~~s~~~~g~yg~-~~~~~s~P~~~g~~Gv~~v~~l~L~~~E~~~l~~s~~~l~~~~~~~ 314 (315)
T 3tl2_A 239 ASLVEMTEAILKDQRRVLPAIAYLEGEYGY-SDLYLGVPVILGGNGIEKIIELELLADEKEALDRSVESVRNVMKVL 314 (315)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeccCccCC-CceEEEEEEEEeCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998 5999999999999999999999999999999999999999999876
No 6
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=100.00 E-value=8.6e-65 Score=515.46 Aligned_cols=302 Identities=28% Similarity=0.552 Sum_probs=277.8
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCC-CCCcEEEcCCccccCCCcEEEEecccc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL-RSPKIESGSDIAMSEGSRIVIITAGVR 256 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~-~~~~v~~ttd~eal~dADiVIitag~~ 256 (488)
|||+|||||.||+++++.|+.+++.++|+|+|++++++++.++||+|...+. ...++..+++|++++|||+||+++|.|
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 6999999999999999999999998899999999999999999999975321 245676677899999999999999999
Q ss_pred cCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHhC
Q psy12825 257 SLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLG 336 (488)
Q Consensus 257 ~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lg 336 (488)
++||++|.|++.+|+++++++++.|.++||++|++++|||+|++|++++|++|||++||||++|.||+.|+++++|+++|
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~~k~~g~p~~rviG~~t~LD~~R~~~~la~~lg 160 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVAYEASGFPTNRVMGMAGVLDTGRFRSFIAEELD 160 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSHHHHHHHHHHHHTCCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCchhHHHHHHHHhcCCChHHEEeecCchHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred CCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcC-CcchhhHHHHHH
Q psy12825 337 LSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKG-YTSWALGLSVAS 415 (488)
Q Consensus 337 v~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg-~t~~s~A~a~~~ 415 (488)
++|++|+++||||||++++|+||+++++|+|+.++. +++.++++.+++++++++|++.|| +++|++|+++++
T Consensus 161 v~~~~v~~~ViG~Hg~t~vp~~S~~~v~g~p~~~~~-------~~~~~~~i~~~v~~~g~eIi~~kg~sa~~a~a~a~~~ 233 (314)
T 3nep_X 161 VSVRDVQALLMGGHGDTMVPLPRYTTVGGIPVPQLI-------DDARIEEIVERTKGAGGEIVDLMGTSAWYAPGAAAAE 233 (314)
T ss_dssp CCGGGEEEEEEESSGGGEEEEEEEEEETTEEGGGTS-------CHHHHHHHHHHHHTHHHHHHHHHSSCCCHHHHHHHHH
T ss_pred cCHHHeEEEEECCCCCcEEeeeecCeECcEehhhcc-------CHHHHHHHHHHHHHhHHHHHhccCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999998864 356789999999999999999998 889999999999
Q ss_pred HHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 416 ISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 416 ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++++|+++++.++|++++++|+||+ +++|||+||++|++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 234 ~~~ail~~~~~v~~~s~~~~g~yg~-~~~~~s~P~~lg~~Gv~~v~~l~L~~~E~~~l~~s~~~l~~~~~~~ 304 (314)
T 3nep_X 234 MTEAILKDNKRILPCAAYCDGEYGL-DDLFIGVPVKLGAGGVEEVIEVDLDADEKAQLKTSAGHVHSNLDDL 304 (314)
T ss_dssp HHHHHHHTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEEEEeccccCC-CceEEEEEEEEeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 5999999999999999999999999999999999999999887653
No 7
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=2.4e-64 Score=513.42 Aligned_cols=308 Identities=35% Similarity=0.670 Sum_probs=278.9
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~ 255 (488)
+++||+|||||++|+++++.|+.+++.+||+|+|++++++++.++|+.|...+....++.. +++++++||||||++++.
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~~~~a~~~aDvVii~ag~ 82 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-GEYSDCKDADLVVITAGA 82 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-CCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-CCHHHhCCCCEEEECCCC
Confidence 3479999999999999999999999999999999999999999999999864434455554 578999999999999999
Q ss_pred ccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHh
Q psy12825 256 RSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKL 335 (488)
Q Consensus 256 ~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~L 335 (488)
++++|++|.|++.+|++++++++++|+++||++|+|++|||+|++|++++++++||++||||+||.||+.|+++++|+++
T Consensus 83 ~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~gt~LD~~R~~~~la~~l 162 (318)
T 1ez4_A 83 PQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGSGTSLDSSRLRVALGKQF 162 (318)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEeccccchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHHHH
Q psy12825 336 GLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVAS 415 (488)
Q Consensus 336 gv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~~~ 415 (488)
|++|++|+++||||||++++|+||+++++|.|+.++.+.. .++++.++++.+++++++++|++.||+++|++|.++++
T Consensus 163 gv~~~~v~~~v~G~HG~t~~p~~s~~~v~g~~~~~~~~~~--~~~~~~~~~~~~~v~~~g~eii~~kg~t~~~~a~a~~~ 240 (318)
T 1ez4_A 163 NVDPRSVDAYIMGEHGDSEFAAYSTATIGTRPVRDVAKEQ--GVSDDDLAKLEDGVRNKAYDIINLKGATFYGIGTALMR 240 (318)
T ss_dssp TCCGGGEECCEESSSSSSCEECGGGCEETTEEHHHHHHHT--TCCHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred CcChhHEEEEEecccCCceEEEehhhcCCCeeHHHHhhcc--CCCHHHHHHHHHHHHHhhhhheeCCCcchHHHHHHHHH
Confidence 9999999999999999999999999999999998876431 24577789999999999999999999999999999999
Q ss_pred HHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 416 ISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 416 ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++++|++|++.++++|++++|+||++ |+|||+||++|++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 241 ~~~ai~~~~~~~~~vs~~~~G~yg~~-~~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 311 (318)
T 1ez4_A 241 ISKAILRDENAVLPVGAYMDGQYGLN-DIYIGTPAIIGGTGLKQIIESPLSADELKKMQDSAATLKKVLNDG 311 (318)
T ss_dssp HHHHHHTTCCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcEEEEEEeecCccCCC-ceEEEEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 999999999999999999999999999999999999999887654
No 8
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=100.00 E-value=2.3e-64 Score=513.97 Aligned_cols=310 Identities=29% Similarity=0.479 Sum_probs=288.0
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCC-CCCCcEEEcCCccccCCCcEEEEe
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF-LRSPKIESGSDIAMSEGSRIVIIT 252 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~-~~~~~v~~ttd~eal~dADiVIit 252 (488)
.|+.+||+|||+|.||+++++.|+..++. +|+|+|++++++++.++||+|...+ ....++..++|+++++|||+||++
T Consensus 2 ~m~~~kI~iiGaG~vG~~~a~~l~~~~~~-~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ 80 (321)
T 3p7m_A 2 AMARKKITLVGAGNIGGTLAHLALIKQLG-DVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVT 80 (321)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEc
Confidence 46778999999999999999999999987 9999999999999999999997421 134677777899999999999999
Q ss_pred cccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHH
Q psy12825 253 AGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLA 332 (488)
Q Consensus 253 ag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA 332 (488)
+|.|++||++|.|++.+|++++++++++|.++||++++|++|||+|++|++++++++||++||||++|.||+.|++++||
T Consensus 81 ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~~k~sg~p~~rviG~~~~LD~~R~~~~la 160 (321)
T 3p7m_A 81 AGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPLDIMVNMLQKFSGVPDNKIVGMAGVLDSARFRTFLA 160 (321)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEEECHHHHHHHHHHHHH
T ss_pred CCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHHHHhcCCCHHHEEeeccchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHhCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHh--cCCcchhhH
Q psy12825 333 QKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKL--KGYTSWALG 410 (488)
Q Consensus 333 ~~Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~--kg~t~~s~A 410 (488)
+++|++|++|+++||||||++++|+||+++++|+|+.++... ..++++.++++.+++++++++|++. +|+++|++|
T Consensus 161 ~~l~v~~~~v~~~v~G~HG~t~~p~~s~~~v~g~p~~~~~~~--~~~~~~~~~~i~~~v~~~g~eIi~~~g~gsa~~~~a 238 (321)
T 3p7m_A 161 DELNVSVQQVQAYVMGGHGDTMVPLTKMSNVAGVSLEQLVKE--GKLKQERLDAIVSRTRSGGGEIVALLKTGSAYYAPA 238 (321)
T ss_dssp HHHTCCGGGEECCEEECSGGGEEECTTTCEETTEEHHHHHHT--TSSCHHHHHHHHHHHHTHHHHHHHHHSSSCCCHHHH
T ss_pred HHhCcCHHHceEeeecCcCCceeeeeeeceECCEehhhhccc--cCCCHHHHHHHHHHHHhhhHHHHHhcCCCChHHHHH
Confidence 999999999999999999999999999999999999887532 1245778899999999999999985 578899999
Q ss_pred HHHHHHHHHHHcCCCcEEEEEeeec-CcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 411 LSVASISHTLLNNTNKIHAVSTLIQ-GHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 411 ~a~~~ii~aIl~~~~~v~~vsv~~~-G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++++++++|++|++.++|++++++ |+||+++|+|||+||++|++|++++ +++|+++|+++|++|++.|++.++.+
T Consensus 239 ~a~~~~~~ail~~~~~v~~~s~~~~~g~ygi~~~v~~s~P~~~g~~Gv~~v-~l~L~~~E~~~l~~s~~~l~~~~~~~ 315 (321)
T 3p7m_A 239 AAGIQMAESFLKDKKMILPCAAKVKAGMYGLDEDLFVGVPTEISANGVRPI-EVEISDKEREQLQVSINAIKDLNKAA 315 (321)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEEECTTGGGCSSCEEEEEEEEEETTEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcEEEEEEEccCcccCCCCCeEEEEEEEEcCCEEEEe-CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 9999999999999999999999999 99999999999999999999887653
No 9
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=100.00 E-value=4.2e-64 Score=506.16 Aligned_cols=291 Identities=36% Similarity=0.576 Sum_probs=277.0
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC-CCCCCcEEEcCCccccCCCcEEEEecccc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP-FLRSPKIESGSDIAMSEGSRIVIITAGVR 256 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~-~~~~~~v~~ttd~eal~dADiVIitag~~ 256 (488)
|||+|||||.+|+++++.|+.+++.++|+|+|++++++++.++|++|... +....++..++|+++++|||+||+++|.|
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aDiVViaag~~ 80 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCCHHHhCCCCEEEECCCCC
Confidence 69999999999999999999999888999999999999999999998753 33456788788899999999999999999
Q ss_pred cCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHhC
Q psy12825 257 SLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLG 336 (488)
Q Consensus 257 ~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lg 336 (488)
++||++|.|++.+|++++++++++|.++||+++++++|||+|++|++++|+++||++||||+||.||++|++++|| ++|
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd~~t~~~~k~~g~p~~rviG~gt~LD~~R~~~~la-~l~ 159 (294)
T 1oju_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIMWKESGKPRNEVFGMGNQLDSQRLKERLY-NAG 159 (294)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHHHHHSCCCTTSEEECSHHHHHHHHHHHHH-HTT
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcchHHHHHHHHhcCCCHHHEeecccccHHHHHHHHHH-HhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHHHHH
Q psy12825 337 LSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASI 416 (488)
Q Consensus 337 v~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~~~i 416 (488)
++|++ +++||||||++++|+||+++++|.| +++++.+++++++++|++.||+++|++|++++++
T Consensus 160 v~~~~-~~~V~G~Hg~t~vp~~s~~~v~g~~---------------~~~~~~~~v~~~g~eii~~kG~t~~~~a~a~~~~ 223 (294)
T 1oju_A 160 ARNIR-RAWIIGEHGDSMFVAKSLADFDGEV---------------DWEAVENDVRFVAAEVIKRKGATIFGPAVAIYRM 223 (294)
T ss_dssp CBSCC-CCCEEBCSSTTCEECGGGCCCBSCC---------------CHHHHHHHHHTTHHHHHHHHSSCCHHHHHHHHHH
T ss_pred CCccC-ceEEEecCCCceeeecccceECCcC---------------hHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH
Confidence 99999 9999999999999999999998876 2568999999999999999999999999999999
Q ss_pred HHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 417 i~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++|++++++++|++++++|+||++ ++|||+||+++++|++ +++++|+++|+++|++|+++|++.++.+
T Consensus 224 ~~ail~~~~~v~~~s~~~~g~yg~~-~~~~s~P~~~g~~Gv~-v~~l~L~~~E~~~l~~s~~~l~~~~~~~ 292 (294)
T 1oju_A 224 VKAVVEDTGEIIPTSMILQGEYGIE-NVAVGVPAKLGKNGAE-VADIKLSDEEIEKLRNSAKILRERLEEL 292 (294)
T ss_dssp HHHHHTTCCCEEEEEEEEESGGGCE-EEEEEEEEEEETTEEE-ECCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCeEEEEEecccccCCCC-ceEEEEEEEEeCCEEE-EecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999997 9999999999999999 9899999999999999999999998865
No 10
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=100.00 E-value=5e-64 Score=512.64 Aligned_cols=309 Identities=39% Similarity=0.716 Sum_probs=284.3
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
.+.+||+|||||++|+++++.|+.+++.++|+|+|++++++++.++||.|...+....++.. +++++++||||||++++
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~~~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-AEYSDAKDADLVVITAG 85 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-CCGGGGGGCSEEEECCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-CCHHHhCCCCEEEEcCC
Confidence 35589999999999999999999999989999999999999999999999764333455554 57899999999999999
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHH
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQK 334 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~ 334 (488)
.++++|++|.|++.+|++++++++++|+++||++|+|++|||+|++|+++++++++|++||||+||.||+.|+++++|++
T Consensus 86 ~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~gt~LD~~R~~~~la~~ 165 (326)
T 2zqz_A 86 APQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGSGTSLDTARFRQSIAEM 165 (326)
T ss_dssp CC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEEccccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCceeEEEeecCCCcccccccceecCccccccCC-CCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHH
Q psy12825 335 LGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNP-TIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSV 413 (488)
Q Consensus 335 Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~-~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~ 413 (488)
+|++|++|+++||||||++++|+||+++++|.|+.++.+ .. .++++.++++.++++.++++|++.||+++|++|.++
T Consensus 166 lgv~~~~v~~~v~G~HG~t~~p~~s~~~v~g~~~~e~~~~~~--~~~~~~~~~i~~~v~~~g~eii~~kG~t~~~~a~aa 243 (326)
T 2zqz_A 166 VNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHP--EIKEDKLVKMFEDVRDAAYEIIKLKGATFYGIATAL 243 (326)
T ss_dssp HTCCGGGEECCEEBSSSTTCEECGGGCEETTEEHHHHHHHCT--TSCHHHHHHHHHHHHTHHHHHHHHHSCCCHHHHHHH
T ss_pred hCCChhheEEEEecccCCceEeehhhceECCEEHHHhhcccc--cCCHHHHHHHHHHHHHhHHHHHHcCCCcHHHHHHHH
Confidence 999999999999999999999999999999999988754 21 245777899999999999999999999999999999
Q ss_pred HHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 414 ASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 414 ~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++++++|++|++.++++|++++|+||+| |+|||+||++|++|++++++++|+++|+++|++|+++|++.++.+
T Consensus 244 ~~~~~ai~~~~~~~~~vsv~~~G~yg~~-~~~~svP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 316 (326)
T 2zqz_A 244 ARISKAILNDENAVLPLSVYMDGQYGLN-DIYIGTPAVINRNGIQNILEIPLTDHEEESMQKSASQLKKVLTDA 316 (326)
T ss_dssp HHHHHHHHTTCCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcEEEEEEeccCccCCC-ceEEEEEEEEcCCeeEEEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 999999999999999999999999999999999999999888764
No 11
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=100.00 E-value=5.7e-64 Score=504.59 Aligned_cols=291 Identities=36% Similarity=0.560 Sum_probs=272.9
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCC-CCCCcEEEcCCccccCCCcEEEEecccc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF-LRSPKIESGSDIAMSEGSRIVIITAGVR 256 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~-~~~~~v~~ttd~eal~dADiVIitag~~ 256 (488)
|||+|||||.||+++++.|+.+++.+||+|+|+++++++|.++||+|+..+ ....++..++||++++|||+||+++|.|
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~p 80 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCC
Confidence 799999999999999999999999999999999999999999999997643 3456788888999999999999999999
Q ss_pred cCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHhC
Q psy12825 257 SLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLG 336 (488)
Q Consensus 257 ~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lg 336 (488)
|+|||+|.|++..|++|++++++.|.++||+++++++|||+|++|++++|.+|+|++|+||+||.||++|++++|++.++
T Consensus 81 rkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPvd~~t~i~~k~sg~p~~rvig~gT~LDs~R~~~~l~~~~~ 160 (294)
T 2x0j_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIMWKESGKPRNEVFGMGNQLDSQRLKERLYNAGA 160 (294)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHHHHHSSCCTTSEEECCHHHHHHHHHHHHHHTTC
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcchhhHHhhHHHcCCChhhEEEeeeEEeHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHHHHH
Q psy12825 337 LSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASI 416 (488)
Q Consensus 337 v~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~~~i 416 (488)
+++. +++||||||++++|+||++++.|.+ +++++.+++++++++|++.||+++|++|++++++
T Consensus 161 ~~~~--~~~V~G~HGdt~vp~~S~~~v~g~~---------------~~~~i~~~~~~~g~eIi~~kGst~~a~a~a~~~~ 223 (294)
T 2x0j_A 161 RNIR--RAWIIGEHGDSMFVAKSLADFDGEV---------------DWEAVENDVRFVAAEVIKRKGATIFGPAVAIYRM 223 (294)
T ss_dssp EEEC--CCCEEBCSSTTCEECGGGCCEESCC---------------CHHHHHHHHHTHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred CCcc--eeEEEecCCCcEEEeeeccCCCCch---------------hHHHHHHHHhhhheEEEecCcccchhHHHHHHHH
Confidence 7653 6899999999999999999987743 2456778899999999999999999999999999
Q ss_pred HHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 417 i~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++|++|++.++|++++.+|+||+ +++|||+||++|++|+ ++++++|+++|+++|++|++.||+.++.+
T Consensus 224 ~~ail~d~~~v~~~s~~l~g~yG~-~~v~~s~P~~lg~~Gv-ei~~l~L~~~E~~~l~~s~~~lk~~i~~l 292 (294)
T 2x0j_A 224 VKAVVEDTGEIIPTSMILQGEYGI-ENVAVGVPAKLGKNGA-EVADIKLSDEEIEKLRNSAKILRERLEEL 292 (294)
T ss_dssp HHHHHTTCCCEEEEEEEEESGGGC-EEEEEEEEEEEETTEE-EECCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCcEEEEEEEEecCCCC-ccEEEEEEEEEeCCEE-EEeCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999 4899999999999998 58889999999999999999999998865
No 12
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=100.00 E-value=5e-64 Score=511.84 Aligned_cols=310 Identities=28% Similarity=0.478 Sum_probs=282.8
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCC-CCCCcEEEcCCccccCCCcEEEEe
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF-LRSPKIESGSDIAMSEGSRIVIIT 252 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~-~~~~~v~~ttd~eal~dADiVIit 252 (488)
.|+++||+|||||.+|+++++.|+..++. +|+|+|++++++++.++|++|...+ ....++..++|+++++|||+||++
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~-~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~~a~~~aDiVIia 82 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELG-DVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIEGADVVIVT 82 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSGGGGTTCSEEEEC
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCC-eEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCHHHHCCCCEEEEc
Confidence 46778999999999999999999999985 9999999999999999999997421 134678878899999999999999
Q ss_pred cccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHH
Q psy12825 253 AGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLA 332 (488)
Q Consensus 253 ag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA 332 (488)
+|.|++||++|.|++.+|++++++++++|.++||++|+|++|||+|++|++++++++||++||||++|.||+.|++++||
T Consensus 83 ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPvd~~t~~~~k~sg~p~~rviG~~~~LD~~R~~~~la 162 (324)
T 3gvi_A 83 AGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWALQKFSGLPAHKVVGMAGVLDSARFRYFLS 162 (324)
T ss_dssp CSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECCHHHHHHHHHHHHH
T ss_pred cCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCcHHHHHHHHHhcCCCHHHEEeecCccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999987999999999999
Q ss_pred HHhCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHh--cCCcchhhH
Q psy12825 333 QKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKL--KGYTSWALG 410 (488)
Q Consensus 333 ~~Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~--kg~t~~s~A 410 (488)
+++|++|++|+++||||||++++|+||+++++|+|+.++.+. ..+++++++++.+++++++++|++. +|+++|++|
T Consensus 163 ~~lgv~~~~v~~~v~G~HG~t~~p~~s~~~v~g~p~~~~~~~--~~~~~~~~~~i~~~v~~~g~eIi~~~gkgsa~~~~a 240 (324)
T 3gvi_A 163 EEFNVSVEDVTVFVLGGHGDSMVPLARYSTVAGIPLPDLVKM--GWTSQDKLDKIIQRTRDGGAEIVGLLKTGSAFYAPA 240 (324)
T ss_dssp HHHTCCGGGEECCEEECSGGGEEECGGGCEETTEEHHHHHHT--TSSCHHHHHHHHHHHHTHHHHHHHHHSSCCCCHHHH
T ss_pred HHhCcCHHHCeEEEEcCCCCceeeehhhCeECCEEHHHhhhc--cCCCHHHHHHHHHHHHHhHHHHHHhcCCCcHHHHHH
Confidence 999999999999999999999999999999999999887532 1245778899999999999999985 578899999
Q ss_pred HHHHHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 411 LSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 411 ~a~~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++++++++|++|++.++|++++++|+||++ |+|||+||++|++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 241 ~a~~~~~~ail~~~~~v~~~s~~~~g~yg~~-~v~~s~P~~~g~~Gv~~v~~l~L~~~E~~~l~~s~~~l~~~~~~~ 316 (324)
T 3gvi_A 241 ASAIQMAESYLKDKKRVLPVAAQLSGQYGVK-DMYVGVPTVIGANGVERIIEIDLDKDEKAQFDKSVASVAGLCEAC 316 (324)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcEEEEEEEecCccCCC-ceEEEEEEEEeCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997 899999999999999999999999999999999999999888764
No 13
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=100.00 E-value=1.3e-63 Score=506.00 Aligned_cols=300 Identities=32% Similarity=0.529 Sum_probs=285.1
Q ss_pred eEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCC-CCCCcEEEcCCccccCCCcEEEEeccccc
Q psy12825 179 KITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF-LRSPKIESGSDIAMSEGSRIVIITAGVRS 257 (488)
Q Consensus 179 KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~-~~~~~v~~ttd~eal~dADiVIitag~~~ 257 (488)
||+|||||+||+++++.++.+++ +||+|+|++++++++.++|+.|...+ ....++..++|+++++|||+||++++.++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l-~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY-DDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSYEDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-SCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCHHHhCCCCEEEEeCCCCC
Confidence 79999999999999999999998 89999999999999999999986421 23567888789999999999999999999
Q ss_pred CCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHhCC
Q psy12825 258 LVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGL 337 (488)
Q Consensus 258 k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lgv 337 (488)
+||++|.|++.+|++++++++++|+++||++|+|++|||+|++|+++++++++|++||||+||.||+.|+++++|+++|+
T Consensus 80 k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~~~~p~~rviG~gt~LD~~R~~~~la~~lgv 159 (308)
T 2d4a_B 80 KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPVDAMTYVMYKKTGFPRERVIGFSGILDSARMAYYISQKLGV 159 (308)
T ss_dssp CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHTS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHhcCCChhhEEEecccchHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcC-CcchhhHHHHHHH
Q psy12825 338 SPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKG-YTSWALGLSVASI 416 (488)
Q Consensus 338 ~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg-~t~~s~A~a~~~i 416 (488)
+|++|+++||||||++++|+||+++++|.|+.+++ +++.++++.+++++++++|++.|| +++|++|.+++++
T Consensus 160 ~~~~v~~~v~G~Hg~t~~p~~s~~~v~g~~~~~~~-------~~~~~~~~~~~v~~~g~eii~~kg~s~~~~~a~a~~~~ 232 (308)
T 2d4a_B 160 SFKSVNAIVLGMHGQKMFPVPRLSSVGGVPLEHLM-------SKEEIEEVVSETVNAGAKITELRGYSSNYGPAAGLVLT 232 (308)
T ss_dssp CGGGEECCEEBCSSTTCEECGGGCEETTEEHHHHS-------CHHHHHHHHHHHHTHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred ChhHeEEEEEeccCCceeeeehhccCCCEEHHHHc-------CHHHHHHHHHHHHHhhHhhhhCCCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999998864 367789999999999999999999 9999999999999
Q ss_pred HHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 417 SHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 417 i~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++|++|++.++++|++++|+||+ +|+|||+||++|++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 233 ~~ai~~~~~~v~~vs~~~~G~yg~-~~~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 302 (308)
T 2d4a_B 233 VEAIKRDSKRIYPYSLYLQGEYGY-NDIVAEVPAVIGKSGIERIIELPLTEDEKRKFDEAVQAVKKLVETL 302 (308)
T ss_dssp HHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHhCCCcEEEEEEEEcCccCC-CceEEEEEEEEcCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 7999999999999999999999999999999999999999988764
No 14
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=100.00 E-value=2.4e-63 Score=505.70 Aligned_cols=309 Identities=35% Similarity=0.677 Sum_probs=288.1
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCC-CCCcEEEcCCccccCCCcEEEEec
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL-RSPKIESGSDIAMSEGSRIVIITA 253 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~-~~~~v~~ttd~eal~dADiVIita 253 (488)
++++||+|||||++|+++++.|+.+++.++|+|+|++++++++.++|+.|...+. ...++.. +++++++|||+||+++
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~~~~a~~~aDvVvi~a 82 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-GEYSDCHDADLVVICA 82 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-CCGGGGTTCSEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-CCHHHhCCCCEEEECC
Confidence 4568999999999999999999999988899999999999999999999974332 2345554 6789999999999999
Q ss_pred ccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHH
Q psy12825 254 GVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQ 333 (488)
Q Consensus 254 g~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~ 333 (488)
+.|+++|++|.|++.+|++++++++++|.++||++|+|++|||+|++|+++++++++|++||||+||.||+.|+++++|+
T Consensus 83 g~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~k~~~~p~~rviG~gt~lD~~r~~~~la~ 162 (317)
T 3d0o_A 83 GAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGSGTILDSARFRLLLSE 162 (317)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHhCCCHHHEEecCccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHH
Q psy12825 334 KLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSV 413 (488)
Q Consensus 334 ~Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~ 413 (488)
++|++|++|+++||||||++++|+||+++++|+|+.++.+.. .++++.++++.+++++++++|++.||+++|++|.++
T Consensus 163 ~l~v~~~~v~~~v~G~HG~t~~p~~s~~~v~g~~~~~~~~~~--~~~~~~~~~~~~~v~~~g~eii~~kg~~~~~~a~a~ 240 (317)
T 3d0o_A 163 AFDVAPRSVDAQIIGEHGDTELPVWSHANIAGQPLKTLLEQR--PEGKAQIEQIFVQTRDAAYDIIQAKGATYYGVAMGL 240 (317)
T ss_dssp HHTSCGGGCBCCEEBCSSTTCEECTTTCEETTEEHHHHHHTS--TTHHHHHHHHHHHHHTHHHHHHHHHSCCCHHHHHHH
T ss_pred HhCcChhhEEEEEEecCCCCeeEeeeccccCCEEHHHHhhcc--CCCHHHHHHHHHHHHhhhhEEEeCCCCchHhHHHHH
Confidence 999999999999999999999999999999999998876432 245667889999999999999999999999999999
Q ss_pred HHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 414 ASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 414 ~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++++++|++|++.++++|++++|+||+| |+|||+||++|++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 241 ~~~~~ai~~~~~~~~~~~~~~~g~~g~~-~~~~~vP~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 313 (317)
T 3d0o_A 241 ARITEAIFRNEDAVLTVSALLEGEYEEE-DVYIGVPAVINRNGIRNVVEIPLNDEEQSKFAHSAKTLKDIMAEA 313 (317)
T ss_dssp HHHHHHHHTTCCEEEEEEEEEESGGGCE-EEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCcEEEEEEeecCccCCC-ceEEEEEEEEeCCeeEEEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 999999999999999999999999999999999999999988764
No 15
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=2e-63 Score=506.61 Aligned_cols=310 Identities=38% Similarity=0.654 Sum_probs=273.1
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~ 255 (488)
+++||+|||+|++|+++++.|+.+++.++|+|+|++++++++.++|+.|...+....++.. +++++++|||+||++++.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~~~~a~~~aDvVii~~g~ 84 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA-GDYSDVKDCDVIVVTAGA 84 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC---CGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE-CCHHHhCCCCEEEEcCCC
Confidence 4579999999999999999999999989999999999999999999999864333334443 578999999999999999
Q ss_pred ccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHh
Q psy12825 256 RSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKL 335 (488)
Q Consensus 256 ~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~L 335 (488)
|+++|++|.|++.+|+++++++++.|.++||++|+|++|||+|++|+++++++++|++||||+||.||+.|+++++|+++
T Consensus 85 p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~gt~Ld~~r~~~~la~~l 164 (318)
T 1y6j_A 85 NRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGSGTVLDSIRFRYLLSEKL 164 (318)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEECTTHHHHHHHHHHHHTTT
T ss_pred CCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHcCCCHHHEeccCCchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHHHH
Q psy12825 336 GLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVAS 415 (488)
Q Consensus 336 gv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~~~ 415 (488)
|++|++|+++||||||++++|+||+++++|.|+.++.++....++++.++++.++++++++++++.||+++|++|.++++
T Consensus 165 gv~~~~v~~~v~G~HG~t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~t~~~~a~a~~~ 244 (318)
T 1y6j_A 165 GVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINT 244 (318)
T ss_dssp TCCTTTEECCEEBCSSSSCEECCTTCEETTBCSCCC-----------CCHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred CCCHHHeEEEEecccCCcEeeeehhceECCEEHHHHhhhhcccCCHHHHHHHHHHHHHhhHhHhhCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999988765321123455678899999999999999999999999999999
Q ss_pred HHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 416 ISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 416 ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++++|++|++.++++|++++|+||+ +|+|||+||++|++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 245 ~~~ai~~~~~~~~~~~~~~~G~yg~-~~~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 315 (318)
T 1y6j_A 245 IVETLLKNQNTIRTVGTVINGMYGI-EDVAISLPSIVNSEGVQEVLQFNLTPEEEEALRFSAEQVKKVLNEV 315 (318)
T ss_dssp HHHHHHHTCCCEECCEEEECSBTTB-CSEEEECCEEEETTEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCcEEEEEEeecCccCC-cceEEEEEEEEcCCeeEEEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 7999999999999999999999999999999999999999988765
No 16
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=100.00 E-value=3.9e-62 Score=496.60 Aligned_cols=311 Identities=35% Similarity=0.692 Sum_probs=289.0
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCC-CCcEEEcCCccccCCCcEEEEec
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLR-SPKIESGSDIAMSEGSRIVIITA 253 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~-~~~v~~ttd~eal~dADiVIita 253 (488)
.+++||+|||+|.||+++++.++.+++.++|+|+|++++++++.++|+.|...+.. ..++. ++++++++|||+||+++
T Consensus 4 ~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~~~~~al~~aDvViia~ 82 (316)
T 1ldn_A 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HGDYDDCRDADLVVICA 82 (316)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-ECCGGGTTTCSEEEECC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-cCcHHHhCCCCEEEEcC
Confidence 35679999999999999999999999888999999999999999999999753222 34555 45789999999999999
Q ss_pred ccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHH
Q psy12825 254 GVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQ 333 (488)
Q Consensus 254 g~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~ 333 (488)
+.++++|++|.|++.+|++++++++++++++||++|++++|||+|++|+++++++++|++||||+||.||+.|+++++|+
T Consensus 83 ~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv~~~~~~~~~~s~~p~~rviG~gt~lD~~r~~~~la~ 162 (316)
T 1ldn_A 83 GANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGE 162 (316)
T ss_dssp SCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHTCCGGGEEECTTHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHHHhCCCHHHEEecccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHH
Q psy12825 334 KLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSV 413 (488)
Q Consensus 334 ~Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~ 413 (488)
++|++|++|+++||||||++++|+||+++++|.|+.++.+... .+.++.++++.+++++++++|++.||+++|++|.++
T Consensus 163 ~l~v~~~~v~~~v~G~HG~~~~p~~s~~~v~g~~~~~~~~~~~-~~~~~~~~~~~~~v~~~g~eii~~kg~~~~~~a~a~ 241 (316)
T 1ldn_A 163 YFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKG-EEAQKDLERIFVNVRDAAYQIIEKKGATYYGIAMGL 241 (316)
T ss_dssp HHTSCGGGEEEEEEBCSSTTCEEEEEEEEETTEESTTTSGGGT-TTHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HhCCCHHHeEEEEecccCCceeeeehhccCCCEEHHHHhhccc-cCCHHHHHHHHHHHHHhHHHHHhccCCcHHHHHHHH
Confidence 9999999999999999999999999999999999988765321 245667889999999999999999999999999999
Q ss_pred HHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhhC
Q psy12825 414 ASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGLL 488 (488)
Q Consensus 414 ~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~~ 488 (488)
++++++|++|++.++++|++++|+||+ +|+|||+||++|++|++++++++|+++|+++|++|+++|++.++.+|
T Consensus 242 ~~~~~ai~~~~~~~~~~~~~~~g~yg~-~~~~~~vP~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~~ 315 (316)
T 1ldn_A 242 ARVTRAILHNENAILTVSAYLDGLYGE-RDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLARAF 315 (316)
T ss_dssp HHHHHHHHTTCCEEEEEEEEEESTTSC-EEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCCCcEEEEEEEecCccCC-cceEEEEEEEEeCCeeEEEccCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999 89999999999999999999999999999999999999999988764
No 17
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=100.00 E-value=7e-62 Score=493.26 Aligned_cols=301 Identities=26% Similarity=0.495 Sum_probs=276.1
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCC-CCCCcEEEcCCccccCCCcEEEEecccc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF-LRSPKIESGSDIAMSEGSRIVIITAGVR 256 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~-~~~~~v~~ttd~eal~dADiVIitag~~ 256 (488)
+||+|||||.||+++++.|+..++. +|+|+|++++++++.++|+.|.... ....++..++|+++++|||+||+++|.|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~-~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELG-DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCC-eEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCHHHHCCCCEEEEcCCCC
Confidence 6999999999999999999999875 4999999999999999999986321 1356788888999999999999999999
Q ss_pred cCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHhC
Q psy12825 257 SLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLG 336 (488)
Q Consensus 257 ~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lg 336 (488)
+++|++|.|++.+|+++++++++.|+++||++|+|++|||+|++|+++++++++|++||||+||.||+.|+++++|+++|
T Consensus 82 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv~~~t~~~~~~~~~~~~rviG~gt~LD~~r~~~~la~~lg 161 (309)
T 1ur5_A 82 RKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAG 161 (309)
T ss_dssp -------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCchHHHHHHHHHHcCCCHHHEEECCcchHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHH--hcCCcchhhHHHHH
Q psy12825 337 LSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIK--LKGYTSWALGLSVA 414 (488)
Q Consensus 337 v~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~--~kg~t~~s~A~a~~ 414 (488)
++|++|+++||||||++++|+||+++++|.|+.+++ +++.++++.+++++++++|++ .||+++|++|.+++
T Consensus 162 v~~~~v~~~v~G~Hg~t~~p~~s~~~v~g~~~~~~~-------~~~~~~~~~~~v~~~g~eii~~~~kgs~~~~~a~a~~ 234 (309)
T 1ur5_A 162 VSVEDVQAMLMGGHGDEMVPLPRFSCISGIPVSEFI-------APDRLAQIVERTRKGGGEIVNLLKTGSAYYAPAAATA 234 (309)
T ss_dssp CCGGGEEECCEECSGGGEECCGGGEEETTEEGGGTS-------CHHHHHHHHHHHHTHHHHHHHHHSSCCCCHHHHHHHH
T ss_pred CChhheeEEEecCcCCceeeeeecceeCCEeHHHHc-------CHhHHHHHHHHHHhhhHHhhhhccCCCcHHHHHHHHH
Confidence 999999999999999999999999999999998754 367789999999999999999 79999999999999
Q ss_pred HHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 415 SISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 415 ~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++++|++|++.++++|++++|+||+ +|+|||+||++|++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 235 ~~~~ai~~~~~~~~~~~~~~~g~~g~-~~~~~~vP~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 306 (309)
T 1ur5_A 235 QMVEAVLKDKKRVMPVAAYLTGQYGL-NDIYFGVPVILGAGGVEKILELPLNEEEMALLNASAKAVRATLDTL 306 (309)
T ss_dssp HHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcEEEEEEEecCccCC-cceEEEEEEEEeCCceEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 7999999999999999999999999999999999999999988765
No 18
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=100.00 E-value=3.7e-63 Score=505.37 Aligned_cols=303 Identities=51% Similarity=0.858 Sum_probs=280.2
Q ss_pred HHHHhhhCCCCCC-CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc
Q psy12825 163 DRLLSQVAPSIES-PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA 241 (488)
Q Consensus 163 ~~~~~e~~~~~~~-~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e 241 (488)
++++.+....... +.+||+|||+|.||+++++.++.+++.++|+|+|++++++++.++||+|...+....++..++||+
T Consensus 6 ~~~~~~~~~~~~~~~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~ 85 (330)
T 3ldh_A 6 DKLIGHLATSQEPRSYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS 85 (330)
T ss_dssp HHHSCCCSCCCCCCCCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC
T ss_pred HHHHhhcccccccCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH
Confidence 3444444332333 568999999999999999999999999999999999999999999999986555667888889999
Q ss_pred ccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCC
Q psy12825 242 MSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTN 321 (488)
Q Consensus 242 al~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~ 321 (488)
+++|||+||+++|.|++||++|.|++.+|++++++++++|.++||++|++++|||+|++|++++++++||++||||+||.
T Consensus 86 ~~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvdi~t~~~~k~sg~p~~rViG~gt~ 165 (330)
T 3ldh_A 86 VSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGTDKNKQDWKLSGLPMHRIIGSGCN 165 (330)
T ss_dssp SCSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHCCCGGGEECCTTH
T ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccHHHHHHHHHHhCCCHHHeecccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHh
Q psy12825 322 LDSMRFRVLLAQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKL 401 (488)
Q Consensus 322 lds~R~~~~lA~~Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~ 401 (488)
||+.|+++++|+++|++|++|+++||||||++++|+||+. +. +++.+++++++++|++.
T Consensus 166 LDs~R~~~~lA~~lgv~~~~V~~~V~G~Hg~t~vp~~S~~---------~~------------~~~~~~v~~~g~eii~~ 224 (330)
T 3ldh_A 166 LDSARFRYLMGERLGVHSCLVIGWVIGQHGDSVPSVWSGM---------WD------------AKLHKDVVDSAYEVIKL 224 (330)
T ss_dssp HHHHHHHHHHHHHHTSCTTTCCEEECSSSSTTCCEEEEEE---------EE------------TTEEHHHHHCCCTTSTT
T ss_pred hhHHHHHHHHHHHhCCCHHHeEEEEEcCCCCceeeechhh---------HH------------HHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999991 10 23566788999999999
Q ss_pred cCCcchhhHH-----------------HHHHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEE--Eec
Q psy12825 402 KGYTSWALGL-----------------SVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTH--IIN 462 (488)
Q Consensus 402 kg~t~~s~A~-----------------a~~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~--i~~ 462 (488)
||+++|++|+ ++++++++|+++++.++|++++++|+||+++|+|||+||++| +|+++ +++
T Consensus 225 kg~t~~a~a~~~~~~~~~~~~~~~~~~a~~~~~~ail~~~~~v~~~s~~~~g~yg~~~~v~~s~P~~lg-~Gv~~~~iv~ 303 (330)
T 3ldh_A 225 KGYTSWAIGLVVSNPVDVLTYVAWKGCSVADLAQTIMKDLCRVHPVSTMVKDFYGIKDNVFLSLPCVLN-NGISHCNIVK 303 (330)
T ss_dssp CHHHHHHHHHTTHHHHTTSSSCSCTHHHHHHHHHHHHHTCCEEECCBCCCSSSSSCCSCCCCBCCEEEB-TTBCTTCCCC
T ss_pred cCCcceeeeeeccCccchhhhhhhHHHHHHHHHHHHHcCCCceEEEEeecCCccCCCCceEEEEEEEEC-CcEEEcceec
Confidence 9999999999 999999999999999999999999999999899999999999 99999 999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 463 QNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 463 l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++|+++|+++|++|++.|++.++++
T Consensus 304 ~~L~~~E~~~l~~s~~~l~~~~~~~ 328 (330)
T 3ldh_A 304 MKLKPDEEQQLQKSATTLWDIQKDL 328 (330)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999875
No 19
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=100.00 E-value=7.3e-61 Score=495.10 Aligned_cols=304 Identities=20% Similarity=0.239 Sum_probs=269.0
Q ss_pred CCCCCceEEEEe-cccchHHHHHHHHHcCCCCe---EEEEeC----ChhHHHHHHHHHhhcCCCCCCCcEEEc-CCcccc
Q psy12825 173 IESPDQKITVVG-AGQVGMACTYSILTQGIYSN---FCLIDS----NEDRCKGEMLDLQHGAPFLRSPKIESG-SDIAMS 243 (488)
Q Consensus 173 ~~~~~~KIaIIG-AG~vG~~ia~~La~~~l~~e---l~L~Di----~~e~l~g~~~dL~~~~~~~~~~~v~~t-td~eal 243 (488)
+..++.||+||| +|.+|+++++.|+.++++++ |+|+|+ ++++++|.++||+|+.. +....+..+ .+|+++
T Consensus 28 ~~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~-p~~~~v~i~~~~y~~~ 106 (375)
T 7mdh_A 28 SWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSIGIDPYEVF 106 (375)
T ss_dssp -CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEESCHHHHT
T ss_pred hCCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhh-hhcCCcEEecCCHHHh
Confidence 344678999999 59999999999999998877 777655 45669999999999863 222344444 458999
Q ss_pred CCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCCh
Q psy12825 244 EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNL 322 (488)
Q Consensus 244 ~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~l 322 (488)
+|||+||+++|.|++||++|.|++..|++|++++++.|.++ +|++++|++|||+|++|++++|+++++++|+||.||.|
T Consensus 107 ~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia~k~sg~~~~rvig~gT~L 186 (375)
T 7mdh_A 107 EDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHALTRL 186 (375)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHH
T ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHHHHHcCCCCccEEEeeehH
Confidence 99999999999999999999999999999999999999998 89999999999999999999999887778899999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcee-EEEeecCCCcccccccceecCccccccCCCCCCCCChHHH--HHHHHHHhhhHHHHH
Q psy12825 323 DSMRFRVLLAQKLGLSPESVHG-FIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENF--VRLHADVVNSAYEVI 399 (488)
Q Consensus 323 ds~R~~~~lA~~Lgv~p~~V~~-~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~--~el~~~v~~~~~eIi 399 (488)
|++|++++||+++|++|.+|+. +||||||+++||+||+++++|+|+.++.+ ++.| +++.+++++++++|+
T Consensus 187 DsaR~r~~lA~~lgv~~~~V~~v~V~GeHgdt~vp~~S~a~V~G~pl~~~~~-------~~~~~~~~i~~~v~~~g~eII 259 (375)
T 7mdh_A 187 DENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIK-------RTKWLEEEFTITVQKRGGALI 259 (375)
T ss_dssp HHHHHHHHHHHHTTSCGGGEECCEEEBCSSTTCEEECSSCEETTEEGGGTCC-------CHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHhCcChhhcccceEEecCCCceeeeeecccCCCEEhhHhcc-------chhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999996 89999999999999999999999988753 3345 679999999999999
Q ss_pred HhcCCcchhhHHHHHHHHHHHH-----cCCCcEEEEEeeecC-cCCCCCceEEEEEEEEcCCceEEEec-cCCCHHHHHH
Q psy12825 400 KLKGYTSWALGLSVASISHTLL-----NNTNKIHAVSTLIQG-HHGIEEEVFLSLPCVMADNGVTHIIN-QNLTPDEAEK 472 (488)
Q Consensus 400 ~~kg~t~~s~A~a~~~ii~aIl-----~~~~~v~~vsv~~~G-~ygl~~d~~~svPv~igk~Gv~~i~~-l~L~~~E~~~ 472 (488)
+.||.++|+ +++++++++|+ +|+++++|+|++++| +||+|+|+|||+||++|++|++++++ ++|+++|+++
T Consensus 260 ~~kG~ts~a--~aa~~i~~~i~~~l~g~d~~~v~~vs~~~~G~~YGi~~dv~~s~P~vlg~~Gv~~iv~~l~L~~~E~~~ 337 (375)
T 7mdh_A 260 QKWGRSSAA--STAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWER 337 (375)
T ss_dssp HHTSSCCHH--HHHHHHHHHHHHHHSCCCTTCCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHHHHH
T ss_pred HhcCCCchH--HHHHHHHHHHHHHhcCCCCCeEEEEEEEeCCccCCCCCceEEEEEEEEcCCeeEEecCCCCCCHHHHHH
Confidence 999999884 45555555554 478999999999999 69999999999999999999999996 9999999999
Q ss_pred HHHHHHHHHHHHHh
Q psy12825 473 LRKSAATISQIQKG 486 (488)
Q Consensus 473 L~~sa~~i~~~~~~ 486 (488)
|++|+++|++..+.
T Consensus 338 l~~Sa~~L~~e~~~ 351 (375)
T 7mdh_A 338 IKKSEAELLAEKKC 351 (375)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999977643
No 20
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=100.00 E-value=3.7e-60 Score=479.37 Aligned_cols=299 Identities=32% Similarity=0.530 Sum_probs=281.6
Q ss_pred ceEEEEe-cccchHHHHHHHHHcCCCCeEEEEeC--ChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 178 QKITVVG-AGQVGMACTYSILTQGIYSNFCLIDS--NEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 178 ~KIaIIG-AG~vG~~ia~~La~~~l~~el~L~Di--~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
+||+|+| +|.+|+++++.|+.+++..+|+|+|+ +++++++.++|+.|...+....++.. +++++++|||+||++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~~~~a~~~aDvVi~~ag 79 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-GGYEDTAGSDVVVITAG 79 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-CCGGGGTTCSEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-CCHHHhCCCCEEEEcCC
Confidence 5999999 69999999999999888889999999 99999998999999754334456655 47899999999999999
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHH
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQK 334 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~ 334 (488)
.++++|++|.|++.+|+++++++++.+++++|++|++++|||+|++|+++++++++|++||||+||.||+.|+++++|++
T Consensus 80 ~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~~~~~~~p~~rviG~gt~Ld~~r~~~~la~~ 159 (303)
T 1o6z_A 80 IPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRSREQVIGFGGRLDSARFRYVLSEE 159 (303)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHHHHHHSSSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHcCCCHHHeeecccchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHHH
Q psy12825 335 LGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVA 414 (488)
Q Consensus 335 Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~~ 414 (488)
+|++|++|+++||||||++++|+||+++++|.| ++. +++.|+++.+++++++++|++.||+++|++|.+++
T Consensus 160 l~v~~~~v~~~v~G~HG~~~~p~~s~~~v~g~p--~~~-------~~~~~~~~~~~v~~~g~eii~~kg~~~~~~a~a~~ 230 (303)
T 1o6z_A 160 FDAPVQNVEGTILGEHGDAQVPVFSKVSVDGTD--PEF-------SGDEKEQLLGDLQESAMDVIERKGATEWGPARGVA 230 (303)
T ss_dssp HTCCGGGEECCEEECSSTTEEECGGGCEETTBC--CCC-------CHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred hCcCHHHeEEEEEeCCCCccccCCcccccCCcC--ccC-------CHHHHHHHHHHHHHHhHHHHhcCCChHHHHHHHHH
Confidence 999999999999999999999999999999988 543 47778999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 415 SISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 415 ~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++++|++|++.+++++++++|+||+ +|+|||+||++|++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 231 ~~~~ai~~~~~~~~~~~~~~~g~~g~-~~~~~~~P~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 302 (303)
T 1o6z_A 231 HMVEAILHDTGEVLPASVKLEGEFGH-EDTAFGVPVSLGSNGVEEIVEWDLDDYEQDLMADAAEKLSDQYDKI 302 (303)
T ss_dssp HHHHHHHTTCCCEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEEEecCCccCC-cceEEEEEEEEeCCeeEEecCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999 7999999999999999999999999999999999999999998765
No 21
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=100.00 E-value=7.6e-61 Score=491.58 Aligned_cols=307 Identities=23% Similarity=0.346 Sum_probs=274.5
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEE
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVI 250 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVI 250 (488)
+=++.+||+|||| |.||+++++.++..++..+|+|+|++++++++.++||+|.. ++ ..++..++|+ ++++|||+||
T Consensus 4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~~-~~~i~~t~d~~~al~dADvVv 81 (343)
T 3fi9_A 4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-FE-GLNLTFTSDIKEALTDAKYIV 81 (343)
T ss_dssp CCSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-CT-TCCCEEESCHHHHHTTEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-CC-CCceEEcCCHHHHhCCCCEEE
Confidence 3456789999998 99999999999999988899999999999999999999985 43 3467777786 7899999999
Q ss_pred EecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcE-EEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHH
Q psy12825 251 ITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCI-LLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRV 329 (488)
Q Consensus 251 itag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~-vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~ 329 (488)
+++|.|++||++|.|++.+|+++++++++.|.++||++| ++++|||+|++|++++|++|||++||+|+ |.||++|+++
T Consensus 82 itaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~i~~k~sg~p~~rv~g~-t~LDs~R~~~ 160 (343)
T 3fi9_A 82 SSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLVTLIYSGLKPSQVTTL-AGLDSTRLQS 160 (343)
T ss_dssp ECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHHHHHHHHHTCCGGGEEEE-CCHHHHHHHH
T ss_pred EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHHHHHHHHcCCCcceEEEe-cCcHHHHHHH
Confidence 999999999999999999999999999999999999997 89999999999999999999999999986 9999999999
Q ss_pred HHHHHhCCCCCCce-eEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcc-h
Q psy12825 330 LLAQKLGLSPESVH-GFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTS-W 407 (488)
Q Consensus 330 ~lA~~Lgv~p~~V~-~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~-~ 407 (488)
+||+++|++|++|+ ++||||||++++|+||+++++|+|+.++.... .+++++|+++.+++++++++|++.||.++ |
T Consensus 161 ~la~~l~v~~~~v~~~~ViGeHgds~vp~~S~a~v~G~pl~~~~~~~--~~~~~~~~~i~~~v~~~g~eIi~~kg~ss~~ 238 (343)
T 3fi9_A 161 ELAKHFGIKQSLVTNTRTYGGHGEQMAVFASTAKVNGTPLTDLIGTD--KLTNEQWAELKQRVVKGGANIIKLRGRSSFQ 238 (343)
T ss_dssp HHHHHHTSCGGGEECCCEEESSGGGEEECGGGCEETTEEGGGTTTBT--TBCHHHHHHHHHHHHTHHHHHHHHHSSCCCH
T ss_pred HHHHHhCcCHHHcccceEEEcCCCceeeeeecceECCEEhhHhcccc--CCCHHHHHHHHHHHHhhhHHHHHccCCCcHH
Confidence 99999999999997 89999999999999999999999999876431 24678899999999999999999999775 5
Q ss_pred hhHHHHHHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccC--CCHHHHHHHHHHHHHHHHHHH
Q psy12825 408 ALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQN--LTPDEAEKLRKSAATISQIQK 485 (488)
Q Consensus 408 s~A~a~~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~--L~~~E~~~L~~sa~~i~~~~~ 485 (488)
++|+++++++++|++|++.++|+|++.+|+| .+|+|||+||++|++|++.+ .++ |+++|+++|++|++.|++.++
T Consensus 239 s~A~a~~~~~~ail~d~~~v~~~s~~~~g~~--~~~v~~s~P~~lg~~Gv~~~-~~~~ll~~~E~~~l~~Sa~~l~~~~~ 315 (343)
T 3fi9_A 239 SPSYVSIEMIRAAMGGEAFRWPAGCYVNVPG--FEHIMMAMETTITKDGVKHS-DINQLGNEAERAALKESYSHLAKLRD 315 (343)
T ss_dssp HHHHHHHHHHHHHTTSSCCCSCEEEEEEETT--EEEEEEEESEEEETTEEEEC-CGGGSSCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCceEEEEEEEeCCC--cCceEEEeEEEEeCCceEEE-ecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999864 47899999999999999876 544 899999999999999998887
Q ss_pred hh
Q psy12825 486 GL 487 (488)
Q Consensus 486 ~~ 487 (488)
.+
T Consensus 316 ~~ 317 (343)
T 3fi9_A 316 EV 317 (343)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 22
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=100.00 E-value=4.5e-60 Score=482.74 Aligned_cols=307 Identities=27% Similarity=0.464 Sum_probs=286.6
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC-CCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP-FLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~-~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
+++||+|||||+||+++++.|+..++.+ |+|+|++++++++...|+.+... .....++..++|+++++|||+||++++
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAG 81 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCHHHhCCCCEEEEeCC
Confidence 4579999999999999999999999854 99999999999999999998632 123567888889999999999999999
Q ss_pred cccCCCcc-----hHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHH
Q psy12825 255 VRSLVGET-----RLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRV 329 (488)
Q Consensus 255 ~~~k~G~~-----r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~ 329 (488)
.|+++|++ |.|++.+|++++++++++|+++||++|+|++|||++++|+++++.++||++||+|+||.||++|+++
T Consensus 82 ~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~t~~~~~~~g~~~~rviG~gt~ld~~R~~~ 161 (322)
T 1t2d_A 82 FTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLKY 161 (322)
T ss_dssp CSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHHHHHHCCCGGGEEECCHHHHHHHHHH
T ss_pred CCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHHHHHHHHhcCCChHHEEeccCcccHHHHHH
Confidence 99999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhh
Q psy12825 330 LLAQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWAL 409 (488)
Q Consensus 330 ~lA~~Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~ 409 (488)
++|+++|++|++|+++||||||++++|+||+++++|.|+.++.+.. +++++.++++.+++++++++|++.||+++|++
T Consensus 162 ~la~~lgv~~~~v~~~v~G~HG~~~~p~~s~~~v~g~~~~~~~~~~--~~~~~~~~~~~~~v~~~g~eii~~kgs~~~~~ 239 (322)
T 1t2d_A 162 YISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNK--LISDAELEAIFDRTVNTALEIVNLHASPYVAP 239 (322)
T ss_dssp HHHHHHTSCGGGEECCEEBCSSTTCEECGGGCEETTEEHHHHHHTT--SSCHHHHHHHHHHHHTHHHHHHHHTSSCCHHH
T ss_pred HHHHHhCCCHHHeEEEEEcCCCCcEEeeHHHceECcEeHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHhccCchHHHH
Confidence 9999999999999999999999999999999999999998876532 24577788999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHh
Q psy12825 410 GLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKG 486 (488)
Q Consensus 410 A~a~~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~ 486 (488)
|.++++++++|++|++.++++|++++|+||+ +|+|||+||++|++|++++++++|+++|+++|++|++.|++.++-
T Consensus 240 a~a~~~~~~ai~~~~~~v~~~s~~~~g~~g~-~~~~~~vP~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~L~~~~~~ 315 (322)
T 1t2d_A 240 AAAIIEMAESYLKDLKKVLICSTLLEGQYGH-SDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRMKAL 315 (322)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEEecCccCC-CceEEEEEEEEeCCeeEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 799999999999999999999999999999999999999988763
No 23
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=100.00 E-value=2e-59 Score=479.08 Aligned_cols=308 Identities=27% Similarity=0.465 Sum_probs=285.4
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC-CCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP-FLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~-~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
.++||+|||||++|+++++.|+..++. +|+|+|++++++++.++++.+... .....++..++|+++++|||+||++++
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~-~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~~aD~VI~avg 91 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLG-DVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNYEYLQNSDVVIITAG 91 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCHHHHCCCCEEEEcCC
Confidence 346999999999999999999999885 499999999999998889888642 113467888889999999999999999
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHH
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQK 334 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~ 334 (488)
.|+++|++|.|++.+|++++++++++|+++||++|+|++|||++++|+++++.++|||+||+|+||.||++|+++++|++
T Consensus 92 ~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~t~~~~~~~~~~~~rviG~~t~Ld~~R~~~~la~~ 171 (328)
T 2hjr_A 92 VPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDAMVYYFKEKSGIPANKVCGMSGVLDSARFRCNLSRA 171 (328)
T ss_dssp CCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEESCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHhcCCChhhEEEeCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred hCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHH--hcCCcchhhHHH
Q psy12825 335 LGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIK--LKGYTSWALGLS 412 (488)
Q Consensus 335 Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~--~kg~t~~s~A~a 412 (488)
+|++|++|+++||||||++++|+||+++++|+|+.++++. ..+++++++++.++++++++++++ .+|+++|++|.+
T Consensus 172 lgv~~~~v~~~v~G~Hg~t~~p~~s~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~v~~~g~eii~~~~~gs~~~~~a~a 249 (328)
T 2hjr_A 172 LGVKPSDVSAIVVGGHGDEMIPLTSSVTIGGILLSDFVEQ--GKITHSQINEIIKKTAFGGGEIVELLKTGSAFYAPAAS 249 (328)
T ss_dssp HTSCGGGEECCEEBCSSTTCEECGGGCEETTEEHHHHHHT--TSSCHHHHHHHHHHHHTHHHHHHHHHSSCCCCHHHHHH
T ss_pred hCCCHHHeeEEEecCCCCceeeeeeeceECCEEHHHHhhc--cCCCHHHHHHHHHHHHhhHHHHHhhhCCCchHHHHHHH
Confidence 9999999999999999999999999999999999887543 124577788999999999999999 689999999999
Q ss_pred HHHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 413 VASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 413 ~~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++++++|++|++.++++|++++|+||+ +|+|||+||++|++|+++++.++|+++|+++|++|++.|++.++.+
T Consensus 250 ~~~i~~ai~~~~~~v~~~~v~~~G~~g~-~~~~~~vP~~ig~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 323 (328)
T 2hjr_A 250 AVAMAQAYLKDSKSVLVCSTYLTGQYNV-NNLFVGVPVVIGKNGIEDVVIVNLSDDEKSLFSKSVESIQNLVQDL 323 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcEEEEEEeecCccCC-CceEEEEEEEEeCCeeEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 7999999999999999999999999999999999999999888754
No 24
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=100.00 E-value=2.3e-59 Score=473.69 Aligned_cols=290 Identities=39% Similarity=0.681 Sum_probs=259.4
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEec
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITA 253 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIita 253 (488)
..+++||+|||||.||+++++.++.+++.++|+|+|++++ +.+.++|+.+.. ..++..++||++++|||+||+++
T Consensus 11 ~~~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~----~~~i~~t~d~~~l~~aD~Vi~aa 85 (303)
T 2i6t_A 11 NKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFN----LPNVEISKDLSASAHSKVVIFTV 85 (303)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHT----CTTEEEESCGGGGTTCSEEEECC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhc----CCCeEEeCCHHHHCCCCEEEEcC
Confidence 3456899999999999999999999999999999999988 788899999853 23777788999999999999999
Q ss_pred ccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHH
Q psy12825 254 GVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQ 333 (488)
Q Consensus 254 g~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~ 333 (488)
|.+ +||++|.|++.+|++++++++++|+++||++|+|++|||+|++|++++++++||++||||+||.||+.|+++++|+
T Consensus 86 g~~-~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~gt~Ld~~R~~~~la~ 164 (303)
T 2i6t_A 86 NSL-GSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITN 164 (303)
T ss_dssp CC-----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHH
T ss_pred CCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCCCCCchHHHHHHHHHH
Confidence 996 7999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHH
Q psy12825 334 KLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSV 413 (488)
Q Consensus 334 ~Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~ 413 (488)
++|++|++|+++|||+||++++|+||+.. ++ +. +++.+++++++++|++.||+++|++|.++
T Consensus 165 ~lgv~~~~v~~~v~G~Hg~s~~p~~s~~~-------~~-------~~----~~~~~~~~~~g~eii~~kGst~~~~a~a~ 226 (303)
T 2i6t_A 165 VLKAQTSGKEVWVIGEQGEDKVLTWSGQE-------EV-------VS----HTSQVQLSNRAMELLRVKGQRSWSVGLSV 226 (303)
T ss_dssp TSCCTTGGGGEEEEBSCSSSCEEEEBCSS-------CC-------CC----HHHHHHHHHHHHTTSSSCCCCHHHHHHHH
T ss_pred HcCCChHHeEEEEecCCCCCccccccccc-------cc-------cH----HHHHHHHHHHHHHHHHccCchHHhHHHHH
Confidence 99999999999999999999999999951 11 11 34677788899999999999999999999
Q ss_pred HHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEecc-CCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 414 ASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQ-NLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 414 ~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l-~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++++++|++|++.+++++++++|+||+|+|+|||+||++|++|+++++++ +|+++|+++|++|++.|++.++.+
T Consensus 227 ~~i~~ai~~~~~~~~~vs~~~~g~yg~~~~~~~~vP~~ig~~Gv~~i~~~~~l~~~e~~~l~~s~~~l~~~~~~~ 301 (303)
T 2i6t_A 227 ADMVDSIVNNKKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQL 301 (303)
T ss_dssp HHHHHHHHTTCCEEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCBCC-CCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCcEEEEEEEeCCccCCCCCeEEEEEEEEECCccEEecCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999887 899999999999999999998765
No 25
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=100.00 E-value=4e-59 Score=473.70 Aligned_cols=303 Identities=30% Similarity=0.506 Sum_probs=276.4
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC--ChhHHHHHHHHHhhcCCCC-CCCcEEEcCC--ccccCCCcEEEE
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS--NEDRCKGEMLDLQHGAPFL-RSPKIESGSD--IAMSEGSRIVII 251 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di--~~e~l~g~~~dL~~~~~~~-~~~~v~~ttd--~eal~dADiVIi 251 (488)
+||+|+|| |.+|+++++.|+.+++..+++|+|+ +++++++.++|+.|...+. ...++..++| +++++|||+||+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~ 80 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII 80 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence 59999999 9999999999999888889999999 8888999999999875332 2446665555 789999999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHH
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLL 331 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~l 331 (488)
+++.++++|++|.+++.+|+++++++++.++++| ++|++++|||+|++|+++++++++|++||||+||.||+.|+++++
T Consensus 81 ~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t~~~~k~~~~p~~rviG~gt~LD~~r~~~~l 159 (313)
T 1hye_A 81 TSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVMTYKALVDSKFERNQVFGLGTHLDSLRFKVAI 159 (313)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHHHHHHHHHHCCCTTSEEECTTHHHHHHHHHHH
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHHHHHHHHhhCcChhcEEEeCccHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHH
Q psy12825 332 AQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGL 411 (488)
Q Consensus 332 A~~Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~ 411 (488)
|+++|++|++|+++||||||++++|+||+++++|.|+.++.. ++++.++++.+++++++++|++.||+++|++|.
T Consensus 160 a~~lgv~~~~v~~~v~G~Hg~~~~p~~s~~~v~g~~~~~~~~-----~~~~~~~~~~~~v~~~g~eii~~kgs~~~~~a~ 234 (313)
T 1hye_A 160 AKFFGVHIDEVRTRIIGEHGDSMVPLLSATSIGGIPIQKFER-----FKELPIDEIIEDVKTKGEQIIRLKGGSEFGPAA 234 (313)
T ss_dssp HHHHTCCGGGEECCEEECSSTTEEECGGGCEETTEEGGGCGG-----GGGCCHHHHHHHHHHHTTSCCC------CCHHH
T ss_pred HHHhCcCHHHeEEEEeeccCCcccceeeccccCCEEHHHHhc-----CCHHHHHHHHHHHHhccceeecCCCCcHHHHHH
Confidence 999999999999999999999999999999999999988640 235557899999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcEEEEEeeecCcC-CCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 412 SVASISHTLLNNTNKIHAVSTLIQGHH-GIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 412 a~~~ii~aIl~~~~~v~~vsv~~~G~y-gl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++++++++|++|++.+++++++++|+| |+ +|+|||+||++|++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 235 a~~~~~~ai~~~~~~~~~~~~~~~g~~~g~-~~~~~~~P~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 310 (313)
T 1hye_A 235 AILNVVRCIVNNEKRLLTLSAYVDGEFDGI-RDVCIGVPVKIGRDGIEEVVSIELDKDEIIAFRKSAEIIKKYCEEV 310 (313)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEESSSSSC-EEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeEEEEEEeecceecCc-cceEEEEEEEEeCCeeEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 99 7999999999999999999999999999999999999999988765
No 26
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=100.00 E-value=6.8e-59 Score=475.65 Aligned_cols=307 Identities=25% Similarity=0.454 Sum_probs=284.6
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC-CCCCCcEEEcCCcc-ccCCCcEEEEecc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP-FLRSPKIESGSDIA-MSEGSRIVIITAG 254 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~-~~~~~~v~~ttd~e-al~dADiVIitag 254 (488)
++||+|||||++|+++++.|+..++. +|+|+|++++++++.+.++.+... .....++..++|++ +++|||+||+++|
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~-~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g 87 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELA-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG 87 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC-eEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccC
Confidence 47999999999999999999999874 499999999999998899888642 12356788889996 8999999999999
Q ss_pred cccCCCc-----chHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHH
Q psy12825 255 VRSLVGE-----TRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRV 329 (488)
Q Consensus 255 ~~~k~G~-----~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~ 329 (488)
.|+++|+ +|.|++.+|++++++++++|+++||++|+|++|||++++|+++++.++||++||+|+||.||+.|+++
T Consensus 88 ~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~t~~~~~~~~~~~~rviG~gt~LD~~R~~~ 167 (331)
T 1pzg_A 88 LTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVMCEASGVPTNMICGMACMLDSGRFRR 167 (331)
T ss_dssp CSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHHHHHHHHhcCCChhcEEeccchHHHHHHHH
Confidence 9999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHH--hcCCcch
Q psy12825 330 LLAQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIK--LKGYTSW 407 (488)
Q Consensus 330 ~lA~~Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~--~kg~t~~ 407 (488)
+||+++|++|++|+++|||+||++++|+||+++++|+|+.++... ..++++.++++.+++++++++|++ .||+++|
T Consensus 168 ~la~~lgv~~~~v~~~v~G~Hg~~~~p~~s~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~eii~~~~kgst~~ 245 (331)
T 1pzg_A 168 YVADALSVSPRDVQATVIGTHGDCMVPLVRYITVNGYPIQKFIKD--GVVTEKQLEEIAEHTKVSGGEIVRFLGQGSAYY 245 (331)
T ss_dssp HHHHHHTSCGGGEECCEEBCSSTTCEECGGGCEETTEEHHHHHHT--TSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCCH
T ss_pred HHHHHhCCCHHHceEEEecCCCCCEeeeeecceECCEEHHHHhhc--ccCCHHHHHHHHHHHHhccHHHHHhhcCCCccc
Confidence 999999999999999999999999999999999999999886532 124567788899899999999999 7999999
Q ss_pred hhHHHHHHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 408 ALGLSVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 408 s~A~a~~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++|.++++++++|++|++.++++|++++|+||+ +|+|||+||++|++|+++++.++|+++|+++|++|++.|++.++.+
T Consensus 246 ~~a~a~~~ii~ai~~~~~~~~~~~v~~~G~~g~-~~~~~~vP~~vg~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 324 (331)
T 1pzg_A 246 APAASAVAMATSFLNDEKRVIPCSVYCNGEYGL-KDMFIGLPAVIGGAGIERVIELELNEEEKKQFQKSVDDVMALNKAV 324 (331)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcEEEEEEEecCccCC-CceEEEEEEEEeCCeeEEecCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 7999999999999999999999999999999999999999888754
No 27
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=100.00 E-value=9.2e-59 Score=469.27 Aligned_cols=302 Identities=35% Similarity=0.602 Sum_probs=254.1
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccccc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRS 257 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~~~ 257 (488)
+||+|||||.+|+++++.|+..++.++|+|+|++++++++.++|+.|...+....++.. +++++++|||+||++++.|+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~~~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH-GGHSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE-ECGGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE-CCHHHhCCCCEEEEcCCCCC
Confidence 59999999999999999999999888999999999999999999988754333455654 57899999999999999999
Q ss_pred CCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHhCC
Q psy12825 258 LVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGL 337 (488)
Q Consensus 258 k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lgv 337 (488)
++|++|.|++.+|++++++++++|+++||++|+|++|||++++++++++.+ |++||||+||.||+.|+++++|+++|+
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~--~~~rviG~gt~Ld~~r~~~~la~~l~v 157 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLA--PGQPVIGSGTVLDSARFRHLMAQHAGV 157 (304)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHS--CSSCEEECTTHHHHHHHHHHHHHHHTS
T ss_pred CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhC--ChhcEEeCCcCchHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999999999999999987 899999999999999999999999999
Q ss_pred CCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHHHHHH
Q psy12825 338 SPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASIS 417 (488)
Q Consensus 338 ~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~~~ii 417 (488)
+|++|+++||||||++++|+||+++++|+|+.++.+.....++++.++++.+++++++++|++.||+++|++|.++++++
T Consensus 158 ~~~~v~~~v~G~Hg~~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~eii~~kg~t~~~~a~a~~~~~ 237 (304)
T 2v6b_A 158 DGTHAHGYVLGEHGDSEVLAWSSAMVAGMPVADFMQAQNLPWNEQVRAKIDEGTRNAAASIIEGKRATYYGIGAALARIT 237 (304)
T ss_dssp CGGGEECCEEESSSTTEEECGGGCEETTEEHHHHHHHHTCCCSHHHHHHHHHHHTC-----------CCHHHHHHHHHHH
T ss_pred CHHHceEEEecCCCCceeeehhHccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999998875432222457778999999999999999999999999999999999
Q ss_pred HHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 418 HTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 418 ~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++|++|++.+++++++++| || +|||+||++|++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 238 ~ai~~~~~~~~~~~~~~~g-yg----~~~~~P~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 302 (304)
T 2v6b_A 238 EAVLRDRRAVLTVSAPTPE-YG----VSLSLPRVVGRQGVLSTLHPKLTGDEQQKLEQSAGVLRGFKQQL 302 (304)
T ss_dssp HHHHTTCCEEEEEEEEETT-TT----EEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHC-----
T ss_pred HHHHhCCCcEEEEEEEECC-cC----cEEEEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 97 89999999999999999999999999999999999999887654
No 28
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=100.00 E-value=2.4e-58 Score=467.27 Aligned_cols=302 Identities=32% Similarity=0.534 Sum_probs=282.8
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC-CCCCCcEEEcCCccccCCCcEEEEecccc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP-FLRSPKIESGSDIAMSEGSRIVIITAGVR 256 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~-~~~~~~v~~ttd~eal~dADiVIitag~~ 256 (488)
|||+|||+|.+|++++..|+.+++..+|+|+|++++++++..+|+.+... +....++..++|++++++||+||++++.|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~l~~aDvViiav~~p 80 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAGLP 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHHHCCCCEEEEeCCCC
Confidence 59999999999999999999887667999999999999988888877521 11245677888998899999999999999
Q ss_pred cCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHhC
Q psy12825 257 SLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLG 336 (488)
Q Consensus 257 ~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lg 336 (488)
+++|++|.|++.+|+++++++++.|++++|+++++++|||++++++++++.+++|++||||+||.||+.|+++++|+++|
T Consensus 81 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~rviG~gt~ld~~r~~~~la~~l~ 160 (310)
T 1guz_A 81 RKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVAWVRSGLPKERVIGMAGVLDAARFRSFIAMELG 160 (310)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHHHHHHHHHHCSCGGGEEEECHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCchHHHHHHHHHhcCCChHHEEECCCchHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHH--hcCCcchhhHHHHH
Q psy12825 337 LSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIK--LKGYTSWALGLSVA 414 (488)
Q Consensus 337 v~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~--~kg~t~~s~A~a~~ 414 (488)
++|++|+++||||||++++|+||+++++|+|+.+++ +++.++++.+++++++++|++ .||+++|++|.+++
T Consensus 161 v~~~~v~~~v~G~Hg~~~~p~~s~~~v~g~~~~~~~-------~~~~~~~~~~~v~~~g~~ii~~~~kgs~~~~~a~a~~ 233 (310)
T 1guz_A 161 VSMQDINACVLGGHGDAMVPVVKYTTVAGIPISDLL-------PAETIDKLVERTRNGGAEIVEHLKQGSAFYAPASSVV 233 (310)
T ss_dssp CCGGGEECCEEECSGGGEEECGGGCEETTEEHHHHS-------CHHHHHHHHHHHHTHHHHHHHHHSSSCCCHHHHHHHH
T ss_pred CCHHHeEEEEEcccCCcEeeeeecccCCCEEHHHHC-------CHHHHHHHHHHHHHhHHHHHhhcCCCCcHHHHHHHHH
Confidence 999999999999999999999999999999998864 367789999999999999999 79999999999999
Q ss_pred HHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 415 SISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 415 ~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++++|++|++.++++|++++|+||+ +|+|||+||++|++|++++++++|+++|+++|++|+++|++.++.+
T Consensus 234 ~~~~ai~~~~~~~~~~~~~~~g~~g~-~~~~~~~P~~ig~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 305 (310)
T 1guz_A 234 EMVESIVLDRKRVLPCAVGLEGQYGI-DKTFVGVPVKLGRNGVEQIYEINLDQADLDLLQKSAKIVDENCKML 305 (310)
T ss_dssp HHHHHHHTTCCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCcEEEEEEeecCccCC-cceEEEEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 7999999999999999999999999999999999999999988764
No 29
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=100.00 E-value=7.3e-58 Score=469.39 Aligned_cols=306 Identities=22% Similarity=0.292 Sum_probs=260.7
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCC-----eEEEEeCCh--hHHHHHHHHHhhcCCCCCCCcEEEcCC-cccc
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYS-----NFCLIDSNE--DRCKGEMLDLQHGAPFLRSPKIESGSD-IAMS 243 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~-----el~L~Di~~--e~l~g~~~dL~~~~~~~~~~~v~~ttd-~eal 243 (488)
..+++.||+|+|| |.+|+++++.|+++.+++ +|+|||+++ +.++|.++||+|+. ++....+..++| ++++
T Consensus 20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~-~~~~~~~~~~~~~~~a~ 98 (345)
T 4h7p_A 20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA-FPLLDKVVVTADPRVAF 98 (345)
T ss_dssp --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT-CTTEEEEEEESCHHHHT
T ss_pred CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC-ccCCCcEEEcCChHHHh
Confidence 6777889999997 999999999999987754 899999976 46789999999985 444556666666 5789
Q ss_pred CCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEeCCchhHHHHHHH-hcCCCCCcEEeecCC
Q psy12825 244 EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIISNPVDVLTYISWK-LSGFPKNRVIGSGTN 321 (488)
Q Consensus 244 ~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~TNPvdi~t~~~~k-~sg~p~~rViG~gt~ 321 (488)
+|||+||+++|.||+|||+|.|++..|++|++++++.|.++| |+++++++|||+|++++++++ .+|++++|+||.+|.
T Consensus 99 ~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~~~~~~g~~~~r~i~~~t~ 178 (345)
T 4h7p_A 99 DGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALILLKSAQGKLNPRHVTAMTR 178 (345)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHHTTTCSCGGGEEECCH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHHHHHccCCCCcceeeeccc
Confidence 999999999999999999999999999999999999999996 789999999999999998877 458888888888899
Q ss_pred hHHHHHHHHHHHHhCCCCCCcee-EEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHH
Q psy12825 322 LDSMRFRVLLAQKLGLSPESVHG-FIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIK 400 (488)
Q Consensus 322 lds~R~~~~lA~~Lgv~p~~V~~-~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~ 400 (488)
||++|++++||+++|++|++|+. +||||||+++||+||+++++|.|+.++++. +...+++.+++++++++|++
T Consensus 179 LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~t~vp~~s~a~v~g~~~~~~~~~------~~~~~~~~~~v~~~g~eIi~ 252 (345)
T 4h7p_A 179 LDHNRALSLLARKAGVPVSQVRNVIIWGNHSSTQVPDTDSAVIGTTPAREAIKD------DALDDDFVQVVRGRGAEIIQ 252 (345)
T ss_dssp HHHHHHHHHHHHHHTSCGGGEECCEEEBCSSTTCEEECTTCEETTEEGGGGCCC------------HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHCcChhheecceeecCCCCeEEeeeccceECCccHHHhcch------hhHHHHHHHHHHhhhhhhhh
Confidence 99999999999999999999985 689999999999999999999999887642 11124688899999999999
Q ss_pred hcCC-cchhhHHHHHHHHHHHHcCCCcEE--EEEeee-cCcCCCCCceEEEEEEEEcCCceEEEec-cCCCHHHHHHHHH
Q psy12825 401 LKGY-TSWALGLSVASISHTLLNNTNKIH--AVSTLI-QGHHGIEEEVFLSLPCVMADNGVTHIIN-QNLTPDEAEKLRK 475 (488)
Q Consensus 401 ~kg~-t~~s~A~a~~~ii~aIl~~~~~v~--~vsv~~-~G~ygl~~d~~~svPv~igk~Gv~~i~~-l~L~~~E~~~L~~ 475 (488)
.||. +.|++|+++++++++|+++.++.. ++.+++ +|+||+|+|+|||+||+++ +|.+++++ ++|+++|+++|++
T Consensus 253 ~kg~ss~~s~a~a~~~~~~~~l~~~~~~~~vs~~v~s~~g~YGi~~~v~~s~Pv~~~-~G~~~iv~~l~l~~~e~~~l~~ 331 (345)
T 4h7p_A 253 LRGLSSAMSAAKAAVDHVHDWIHGTPEGVYVSMGVYSDENPYGVPSGLIFSFPCTCH-AGEWTVVSGKLNGDLGKQRLAS 331 (345)
T ss_dssp HHSSCCCHHHHHHHHHHHHHHHHCCCTTCCEEEEEECTTCTTCCCSSCEEEEEEEEE-TTEEEECCSCC-----CGGGHH
T ss_pred cCCCcchhhHHHHHHHHHHHHhcCCCCceEEEEEEEeCCCCcCCCCCEEEEEEEEEe-CCEEEEeCCCCCCHHHHHHHHH
Confidence 9874 679999999999999999875544 445555 5899999999999999997 78888887 7999999999999
Q ss_pred HHHHHHHHHHh
Q psy12825 476 SAATISQIQKG 486 (488)
Q Consensus 476 sa~~i~~~~~~ 486 (488)
|+++|++....
T Consensus 332 s~~~L~~E~~~ 342 (345)
T 4h7p_A 332 TIAELQEERAQ 342 (345)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987643
No 30
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=100.00 E-value=1.8e-57 Score=461.37 Aligned_cols=287 Identities=29% Similarity=0.429 Sum_probs=262.2
Q ss_pred ceEEEEe-cccchHHHHHHHHHc-CCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE---cCCccccCCCcEEEEe
Q psy12825 178 QKITVVG-AGQVGMACTYSILTQ-GIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES---GSDIAMSEGSRIVIIT 252 (488)
Q Consensus 178 ~KIaIIG-AG~vG~~ia~~La~~-~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~---ttd~eal~dADiVIit 252 (488)
|||+||| +|.||+++++.|+.+ ++.++|+|+|+++ +++|.++||+|.. ...++.. +.+|++++|||+||++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~---~~~~v~~~~~~~~~~~~~~aDivii~ 76 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP---TAVKIKGFSGEDATPALEGADVVLIS 76 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSC---SSEEEEEECSSCCHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCC---CCceEEEecCCCcHHHhCCCCEEEEe
Confidence 6999999 599999999999987 7888999999988 6889999999963 2345553 2468999999999999
Q ss_pred cccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHH---HHHhcCC-CCCcEEeecCChHHHHHH
Q psy12825 253 AGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYI---SWKLSGF-PKNRVIGSGTNLDSMRFR 328 (488)
Q Consensus 253 ag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~---~~k~sg~-p~~rViG~gt~lds~R~~ 328 (488)
+|.|++||++|.|++.+|+++++++++.|.++||+++++++|||+|++|++ ++|.+|+ |++||+|++ .||+.|++
T Consensus 77 ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~~t~~a~~~~k~sg~~p~~rv~G~~-~LD~~R~~ 155 (312)
T 3hhp_A 77 AGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVT-TLDIIRSN 155 (312)
T ss_dssp CSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEECC-HHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchhHHHHHHHHHHHcCCCCcceEEEEe-chhHHHHH
Confidence 999999999999999999999999999999999999999999999999999 7888997 999999995 99999999
Q ss_pred HHHHHHhCCCCCCceeEEEeec-CCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhc---CC
Q psy12825 329 VLLAQKLGLSPESVHGFIIGEH-GDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK---GY 404 (488)
Q Consensus 329 ~~lA~~Lgv~p~~V~~~V~G~H-G~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~k---g~ 404 (488)
++||+++|++|++|+++||||| |++++|+||++ .|.| +++++|+++.+++++++++|++.| |+
T Consensus 156 ~~la~~lgv~~~~v~~~V~G~Hsg~t~vp~~S~~--~g~~-----------~~~~~~~~i~~~v~~~g~eIi~~k~g~gs 222 (312)
T 3hhp_A 156 TFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV--PGVS-----------FTEQEVADLTKRIQNAGTEVVEAKAGGGS 222 (312)
T ss_dssp HHHHHHHTCCGGGCCCCEEECSSGGGEEECGGGC--TTCC-----------CCHHHHHHHHHHHHTHHHHHHHHTTTSCC
T ss_pred HHHHHHhCcChhHcceeEEeccCCCceeeecccC--CCCC-----------CCHHHHHHHHHHHHhhhHHHHhhccCCCC
Confidence 9999999999999999999999 88999999998 5544 246789999999999999999988 89
Q ss_pred cchhhHHHHHHHHHHH---HcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEecc-CCCHHHHHHHHHHHHHH
Q psy12825 405 TSWALGLSVASISHTL---LNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQ-NLTPDEAEKLRKSAATI 480 (488)
Q Consensus 405 t~~s~A~a~~~ii~aI---l~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l-~L~~~E~~~L~~sa~~i 480 (488)
++|++|+++++++++| ++|++.+++++ +++|+ | +.++|||+||++|++|+++++++ +|+++|+++|++|+++|
T Consensus 223 t~~s~a~a~~~~~~ai~~~l~~~~~v~~~s-~~~g~-g-~~~v~~s~P~~~g~~Gv~~v~~~~~L~~~E~~~l~~s~~~l 299 (312)
T 3hhp_A 223 ATLSMGQAAARFGLSLVRALQGEQGVVECA-YVEGD-G-QYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTL 299 (312)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCSSCEEEE-EEECC-C-SSCSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCceEEEE-EecCC-C-CcceEEEeEEEEeCCEEEEEcCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999 78888999998 88876 4 35789999999999999999997 99999999999999999
Q ss_pred HHHHH
Q psy12825 481 SQIQK 485 (488)
Q Consensus 481 ~~~~~ 485 (488)
++.++
T Consensus 300 ~~~i~ 304 (312)
T 3hhp_A 300 KKDIA 304 (312)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 97664
No 31
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=100.00 E-value=1.2e-57 Score=466.51 Aligned_cols=303 Identities=18% Similarity=0.267 Sum_probs=268.7
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCe-----EEEEeCCh--hHHHHHHHHHhhcCCCCCCCcEEEcCC-ccccCCC
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSN-----FCLIDSNE--DRCKGEMLDLQHGAPFLRSPKIESGSD-IAMSEGS 246 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~e-----l~L~Di~~--e~l~g~~~dL~~~~~~~~~~~v~~ttd-~eal~dA 246 (488)
+++||+|+|| |.+|+++++.|+.++++++ |+|+|+++ ++++|.++||+|+.. +....+..+++ +++++||
T Consensus 2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~-~~~~~~~~~~~~~~~~~da 80 (333)
T 5mdh_A 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-PLLKDVIATDKEEIAFKDL 80 (333)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-TTEEEEEEESCHHHHTTTC
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh-cccCCEEEcCCcHHHhCCC
Confidence 4689999995 9999999999999998888 99999974 689999999999742 22234555544 6899999
Q ss_pred cEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCc-EEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHH
Q psy12825 247 RIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDC-ILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSM 325 (488)
Q Consensus 247 DiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a-~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~ 325 (488)
|+||+++|.|++||++|.|++..|+++++++++.+.+++|++ |+|++|||+|++|++++++++++|+++||.||.||++
T Consensus 81 DvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t~~~~~~~~~~p~~~ig~~t~LDs~ 160 (333)
T 5mdh_A 81 DVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHN 160 (333)
T ss_dssp SEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHH
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHHHHHHHHcCCCCcCEEEEEEhHHHH
Confidence 999999999999999999999999999999999999999997 7999999999999999999865555668999999999
Q ss_pred HHHHHHHHHhCCCCCCceeE-EEeecCCCccccccccee--cCccc--cccCCCCCCCCChHHH--HHHHHHHhhhHHHH
Q psy12825 326 RFRVLLAQKLGLSPESVHGF-IIGEHGDSSVPVWSGVNV--AGVTL--KELNPTIGTEQDTENF--VRLHADVVNSAYEV 398 (488)
Q Consensus 326 R~~~~lA~~Lgv~p~~V~~~-V~G~HG~~~vp~~S~a~v--~g~pl--~e~~~~~~~~~~~~~~--~el~~~v~~~~~eI 398 (488)
|++++||+++|++|++|+++ ||||||++++|+||++++ +|.|+ .++.+ ++.| +++.+++++++++|
T Consensus 161 R~~~~la~~l~v~~~~v~~~vV~GeHgds~vp~~S~a~v~i~g~~~~~~~~~~-------~~~~~~~~~~~~v~~~g~eI 233 (333)
T 5mdh_A 161 RAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVK-------DDSWLKGEFITTVQQRGAAV 233 (333)
T ss_dssp HHHHHHHHHHTCCGGGEECCEEEBCSSTTCEEECTTCEEECSSCEEEHHHHHC-------CHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCHHHeeecEEEEcCCCCEEEeeeccEeccCCeeccHHHhhc-------cccccHHHHHHHHHHHHHHH
Confidence 99999999999999999987 599999999999999975 68765 35432 2344 57999999999999
Q ss_pred HHhcC-CcchhhHHHHHHHHHHHHcCC--CcEEEEEeeecC-cCCCCCceEEEEEEEEcCCceEEEec-cCCCHHHHHHH
Q psy12825 399 IKLKG-YTSWALGLSVASISHTLLNNT--NKIHAVSTLIQG-HHGIEEEVFLSLPCVMADNGVTHIIN-QNLTPDEAEKL 473 (488)
Q Consensus 399 i~~kg-~t~~s~A~a~~~ii~aIl~~~--~~v~~vsv~~~G-~ygl~~d~~~svPv~igk~Gv~~i~~-l~L~~~E~~~L 473 (488)
++.|| ++.|+.|.++.+++++|++++ ++++|++++++| +||+|+|+|||+||++ ++|++++++ ++|+++|+++|
T Consensus 234 i~~k~~ssa~~~a~~~~~~~~~il~~~~~~~v~~~s~~~~G~~YGi~~~v~~s~P~~~-~~Gv~~iv~~l~L~~~E~~~l 312 (333)
T 5mdh_A 234 IKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTI-KDKTWKIVEGLPINDFSREKM 312 (333)
T ss_dssp HHHHSSCCCHHHHHHHHHHHHHHHHCCCTTCCEEEEEECTTCSSSCCSSCEEEEEEEE-ETTEEEECCCCCCCHHHHHHH
T ss_pred HHccCchHHHHHHHHHHHHHHHHhcCCCCCeEEEEEEecCCcccCCCCCeEEEEEEEE-cCCeEEEcCCCCCCHHHHHHH
Confidence 99765 578999999999999999985 589999999999 9999889999999999 999999998 99999999999
Q ss_pred HHHHHHHHHHHHhh
Q psy12825 474 RKSAATISQIQKGL 487 (488)
Q Consensus 474 ~~sa~~i~~~~~~~ 487 (488)
++|+++|++.++.+
T Consensus 313 ~~sa~~L~~~~~~~ 326 (333)
T 5mdh_A 313 DLTAKELAEEKETA 326 (333)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887654
No 32
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=1.5e-56 Score=455.78 Aligned_cols=307 Identities=38% Similarity=0.690 Sum_probs=284.6
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccccc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRS 257 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~~~ 257 (488)
+||+|||+|.||++++..|+..++.++|+|+|++++++++...++.+...+....++.. +|++++++||+||++++.++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~d~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA-GDYADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE-CCGGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe-CCHHHhCCCCEEEEccCCCC
Confidence 58999999999999999999988878999999999999988888877643222345655 47889999999999999999
Q ss_pred CCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHhCC
Q psy12825 258 LVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGL 337 (488)
Q Consensus 258 k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lgv 337 (488)
++|++|.|++.+|+++++++++.|++++|++++|++|||++++++++++.++||++||+|++|.||+.|+++++|+++|+
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~~t~ld~~r~~~~la~~lgv 159 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGSGTVLDTARLRTLIAQHCGF 159 (319)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEECTTHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHHHHHHHHHHhCCChhhEEeeCccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHHHHHH
Q psy12825 338 SPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSVASIS 417 (488)
Q Consensus 338 ~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~~~ii 417 (488)
+|.+|+++|||+||++++|+||+++++|+|+.++.+++. .++++.++++.+.++++++++++.||+++|++|.++++++
T Consensus 160 ~~~~v~~~v~G~hg~~~~p~~s~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~v~~~g~eii~~kg~~~~~~a~a~~~~~ 238 (319)
T 1a5z_A 160 SPRSVHVYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQ-KCDSKILENFAEKTKRAAYEIIERKGATHYAIALAVADIV 238 (319)
T ss_dssp CGGGEECCEEBCSSTTCEECGGGCEETTEEHHHHHTTSS-SCCHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred CHHHceEEEEeCCCCCcccchhhceECCEEHHHHhhccc-ccCHHHHHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999876432 1456778899999999999999999999999999999999
Q ss_pred HHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 418 HTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 418 ~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++|++|++.++++|++++|+||+ +|+|||+||++|++|+++++.++|+++|+++|++|++.|++.++.+
T Consensus 239 ~ai~~~~~~~~~~~~~~~g~~g~-~~~~~~vP~~vg~~Gv~~i~~~~L~~~e~~~l~~s~~~l~~~~~~~ 307 (319)
T 1a5z_A 239 ESIFFDEKRVLTLSVYLEDYLGV-KDLCISVPVTLGKHGVERILELNLNEEELEAFRKSASILKNAINEI 307 (319)
T ss_dssp HHHHTTCCEEEEEEEEESSBTTB-CSEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEEEEecCccCc-cceEEEEEEEEeCCceEEEecCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999 8999999999999999999999999999999999999999888754
No 33
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=100.00 E-value=5.2e-55 Score=446.41 Aligned_cols=304 Identities=19% Similarity=0.299 Sum_probs=274.6
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCC-----CeEEEEeCC----hhHHHHHHHHHhhcCCCCCCCcEEEcCC-ccccC
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIY-----SNFCLIDSN----EDRCKGEMLDLQHGAPFLRSPKIESGSD-IAMSE 244 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~-----~el~L~Di~----~e~l~g~~~dL~~~~~~~~~~~v~~ttd-~eal~ 244 (488)
+++||+|||| |.+|+++++.|+.+++. .+|+|+|++ ++++++.++||.|.. +.....+..++| +++++
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~-~~~~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA-FPLLAGMTAHADPMTAFK 82 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT-CTTEEEEEEESSHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc-ccccCcEEEecCcHHHhC
Confidence 4689999998 99999999999988865 499999999 888999999999963 122346666677 47899
Q ss_pred CCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEeCCchhHHHHHHHhc-CCCCCcEEeecCCh
Q psy12825 245 GSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIISNPVDVLTYISWKLS-GFPKNRVIGSGTNL 322 (488)
Q Consensus 245 dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~TNPvdi~t~~~~k~s-g~p~~rViG~gt~l 322 (488)
|||+||++++.++++|++|.|++.+|+++++++++.+.++| |++|+|++|||+|++|+++++.+ +||++||+|+ |.|
T Consensus 83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~-t~L 161 (329)
T 1b8p_A 83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAM-LRL 161 (329)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEEC-CHH
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCCHHHEEEe-ecH
Confidence 99999999999999999999999999999999999999997 99999999999999999999998 9999999887 999
Q ss_pred HHHHHHHHHHHHhCCCCCCcee-EEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHh
Q psy12825 323 DSMRFRVLLAQKLGLSPESVHG-FIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKL 401 (488)
Q Consensus 323 ds~R~~~~lA~~Lgv~p~~V~~-~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~ 401 (488)
|+.|+++++|+++|++|++|+. +||||||++++|+||+++++|.|+.++++. ++...+++.+++++++++|++.
T Consensus 162 d~~r~~~~la~~lgv~~~~v~~~~v~G~Hg~s~~p~~s~~~v~g~~~~~~~~~-----~~~~~~~i~~~v~~~g~eii~~ 236 (329)
T 1b8p_A 162 DHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMIND-----DAWNRDTFLPTVGKRGAAIIDA 236 (329)
T ss_dssp HHHHHHHHHHHHHTCCGGGEESCEEEBCSSTTCEEECSSCEETTEEHHHHHCC-----HHHHHHTHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCHHHceEEEEEeccCCcEeeehHHCeECCeeHHHHhcc-----chhhHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999995 689999999999999999999999886542 0112367999999999999999
Q ss_pred cCCcchhh-HHHHHHHHHHHHcC-CCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEec-cCCCHHHHHHHHHHHH
Q psy12825 402 KGYTSWAL-GLSVASISHTLLNN-TNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIIN-QNLTPDEAEKLRKSAA 478 (488)
Q Consensus 402 kg~t~~s~-A~a~~~ii~aIl~~-~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~-l~L~~~E~~~L~~sa~ 478 (488)
||.++|++ |.++++++++|+++ ++++++++++++|+||+|+|+|||+||++ ++|++++++ ++|+++|+++|++|++
T Consensus 237 kg~~~~~~~a~a~~~~~~ai~~~~~~~~~~~s~~~~g~yg~~~~~~~s~P~~i-~~Gv~~i~~~~~l~~~e~~~l~~s~~ 315 (329)
T 1b8p_A 237 RGVSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEGVIFGFPVTT-ENGEYKIVQGLSIDAFSQERINVTLN 315 (329)
T ss_dssp HSSCCHHHHHHHHHHHHHHHHHCCTTCCEEEEEECCSGGGCCTTCEEEEEEEE-ETTEEEECCCCCCCHHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHHHHHhcCCCCcEEEEEEEecCccCCCCCeEEEEEEEE-cCCEEEecCCCCCCHHHHHHHHHHHH
Confidence 99887764 56889999999998 89999999999999999999999999999 999999998 9999999999999999
Q ss_pred HHHHHHHhh
Q psy12825 479 TISQIQKGL 487 (488)
Q Consensus 479 ~i~~~~~~~ 487 (488)
.|++.++.+
T Consensus 316 ~l~~~~~~~ 324 (329)
T 1b8p_A 316 ELLEEQNGV 324 (329)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887654
No 34
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=100.00 E-value=2.3e-54 Score=439.09 Aligned_cols=289 Identities=23% Similarity=0.385 Sum_probs=262.6
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE---cCCcc-ccCCCcEEEEe
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES---GSDIA-MSEGSRIVIIT 252 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~---ttd~e-al~dADiVIit 252 (488)
|||+|||| |.+|+++++.|+..++..+|+|+|+++ .++.++||.|... ..++.. ++|++ +++|||+||++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~---~~~l~~~~~t~d~~~a~~~aDvVvi~ 75 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIET---RATVKGYLGPEQLPDCLKGCDVVVIP 75 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSS---SCEEEEEESGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCc---CceEEEecCCCCHHHHhCCCCEEEEC
Confidence 59999998 999999999999888888999999987 6788999999752 235665 35785 79999999999
Q ss_pred cccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHH----HHHHHhcCCCCCcEEeecCChHHHHHH
Q psy12825 253 AGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLT----YISWKLSGFPKNRVIGSGTNLDSMRFR 328 (488)
Q Consensus 253 ag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t----~~~~k~sg~p~~rViG~gt~lds~R~~ 328 (488)
+|.|+++|++|.|++.+|+++++++++.|.+++|++|+|++|||+|+++ +++++.++||++||||+ |.||+.|++
T Consensus 76 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~~~~~~~~~~~p~~rvig~-t~Ld~~r~~ 154 (314)
T 1mld_A 76 AGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFGV-TTLDIVRAN 154 (314)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEEC-CHHHHHHHH
T ss_pred CCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcchhHHHHHHHHHHcCCCCcceEEEe-ecccHHHHH
Confidence 9999999999999999999999999999999999999999999999998 56778889999999999 999999999
Q ss_pred HHHHHHhCCCCCCceeEEEeec-CCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhc---CC
Q psy12825 329 VLLAQKLGLSPESVHGFIIGEH-GDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK---GY 404 (488)
Q Consensus 329 ~~lA~~Lgv~p~~V~~~V~G~H-G~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~k---g~ 404 (488)
+++|+++|++|++|+++||||| |++++|+||+++ |..+ +++++|+++.+++++++++|++.| |+
T Consensus 155 ~~la~~l~v~~~~v~~~v~G~H~G~~~~p~~s~~~----~~~~--------~~~~~~~~~~~~v~~~g~eii~~k~~~g~ 222 (314)
T 1mld_A 155 AFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCT----PKVD--------FPQDQLSTLTGRIQEAGTEVVKAKAGAGS 222 (314)
T ss_dssp HHHHHHTTCCGGGCBCCEEECSSGGGEEECGGGCB----SCCC--------CCHHHHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHhCcChHhEEEEEccCCCCCcEeeecccCC----Cccc--------CCHHHHHHHHHHHHHHHHHHHhhhcCCCC
Confidence 9999999999999999999999 899999999997 3221 457889999999999999999955 78
Q ss_pred cchhhHHHHHHHHHHHHcC---CCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEecc-CCCHHHHHHHHHHHHHH
Q psy12825 405 TSWALGLSVASISHTLLNN---TNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQ-NLTPDEAEKLRKSAATI 480 (488)
Q Consensus 405 t~~s~A~a~~~ii~aIl~~---~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l-~L~~~E~~~L~~sa~~i 480 (488)
++|++|.++++++++|++| ++.++++ ++++|+| ++|+|||+||++|++|++++.++ +|+++|+++|++|++.|
T Consensus 223 t~~~~a~a~~~~~~ai~~~~~g~~~v~~~-~~~~g~y--~~~~~~~~P~~ig~~Gv~~i~~l~~l~~~e~~~l~~s~~~l 299 (314)
T 1mld_A 223 ATLSMAYAGARFVFSLVDAMNGKEGVVEC-SFVKSQE--TDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPEL 299 (314)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCTTCEEE-EEEECCS--SSSSEEEEEEEEETTEEEEECCCCSCCHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHcCcCCCcceEEE-EEeCCcc--CCceEEEEEEEEeCCeeEEecCCCCCCHHHHHHHHHHHHHH
Confidence 8999999999999999998 3478888 7999999 78999999999999999999887 99999999999999999
Q ss_pred HHHHHhh
Q psy12825 481 SQIQKGL 487 (488)
Q Consensus 481 ~~~~~~~ 487 (488)
++.++.+
T Consensus 300 ~~~~~~~ 306 (314)
T 1mld_A 300 KASIKKG 306 (314)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9877653
No 35
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=100.00 E-value=7.6e-53 Score=427.77 Aligned_cols=308 Identities=29% Similarity=0.462 Sum_probs=281.5
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC-CCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP-FLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~-~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
+++||+|||+|.||++++..|+..++. +|+|+|++++++++...|+.+... .....++..++|++++++||+||++++
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~g~~-~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~a~~~aDiVi~avg 81 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKDNLA-DVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDYADISGSDVVIITAS 81 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCHHHhCCCCEEEEeCC
Confidence 357999999999999999999998864 699999999999987778876521 112457777788999999999999999
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHH
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQK 334 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~ 334 (488)
.|+++|++|.|++.+|.+++++++++|++++|+++++++|||++++++++++.+++|++||+|++|.+|+.|++.+++++
T Consensus 82 ~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~~t~ld~~r~~~~la~~ 161 (317)
T 2ewd_A 82 IPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQH 161 (317)
T ss_dssp CSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHCCCGGGEEESCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHhhCCCHHHEEeccCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHH--hcCCcchhhHHH
Q psy12825 335 LGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIK--LKGYTSWALGLS 412 (488)
Q Consensus 335 Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~--~kg~t~~s~A~a 412 (488)
+|+++.+++++|||+||++++|+||+++++|+|+.+++.+ ..+++++++++.+.++.+++++++ .+|++.|++|.+
T Consensus 162 lg~~~~~v~~~v~g~Hg~~~~~~~~~a~v~g~~~~~~~~~--g~~~~~~id~~~~~~~~~~~ei~~~~g~g~~~~~~a~a 239 (317)
T 2ewd_A 162 FGVNASDVSANVIGGHGDGMVPATSSVSVGGVPLSSFIKQ--GLITQEQIDEIVCHTRIAWKEVADNLKTGTAYFAPAAA 239 (317)
T ss_dssp HTSCGGGEECCEEBCSSTTCEECGGGCEETTEEHHHHHHT--TSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHH
T ss_pred hCcChhhceEEEEecCCCceeEEeeccccCCEEHHHHHhc--cCCCHHHHHHHHHHHHhhHHHHHHhhcCCchHHHHHHH
Confidence 9999999999999999999999999999999998876532 124577788888888899999998 578899999999
Q ss_pred HHHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 413 VASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 413 ~~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
+++++++|++|++.+++++++++|+||+ +|+|||+||++|++|+++++.++|+++|+++|++|++.|++.++.+
T Consensus 240 ~~~~~~ai~~~~~~~~~~~~~~~G~~g~-~~~~~~~P~~i~~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 313 (317)
T 2ewd_A 240 AVKMAEAYLKDKKAVVPCSAFCSNHYGV-KGIYMGVPTIIGKNGVEDILELDLTPLEQKLLGESINEVNTISKVL 313 (317)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEESSSTTC-SSEEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEEEEEecCccCC-cceEEEeEEEEcCCeeEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 7999999999999999999999999999999999999999988764
No 36
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=1.2e-52 Score=424.62 Aligned_cols=300 Identities=29% Similarity=0.481 Sum_probs=269.2
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCC-CCCcEEEcCCccccCCCcEEEEeccc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL-RSPKIESGSDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~-~~~~v~~ttd~eal~dADiVIitag~ 255 (488)
++||+|||+|.||++++..|+..++..+|+|+|++++++++...++.+...+. ...++. ++|++++++||+||++++.
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~d~~~~~~aDvViiav~~ 79 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV-INDWAALADADVVISTLGN 79 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE-ESCGGGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEE-eCCHHHhCCCCEEEEecCC
Confidence 36999999999999999999998866699999999999999888887654211 123333 4688899999999999999
Q ss_pred ccC----CCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHH
Q psy12825 256 RSL----VGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLL 331 (488)
Q Consensus 256 ~~k----~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~l 331 (488)
+++ +|++|.|++.+|+++++++++.|.+++|++++|++|||++++++++++.+++|++||+|+||.+|+.|++..+
T Consensus 80 ~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rvig~gt~ld~~r~~~~~ 159 (309)
T 1hyh_A 80 IKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVITALFQHVTGFPAHKVIGTGTLLDTARMQRAV 159 (309)
T ss_dssp GGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHHHHHHHHHHhcCCCHHHEeecCccchHHHHHHHH
Confidence 998 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcCCcchhhHH
Q psy12825 332 AQKLGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKGYTSWALGL 411 (488)
Q Consensus 332 A~~Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~ 411 (488)
++.+++++.+|++++||+||++++|+||++.++|.|+.++.+ ++++.|+++.++++++++++++.||+++|++|.
T Consensus 160 a~~l~~~~~~v~~~v~G~hg~~~~~~~s~~~v~g~~~~~~~~-----~~~~~~~~~~~~v~~~g~~ii~~kg~~~~~~a~ 234 (309)
T 1hyh_A 160 GEAFDLDPRSVSGYNLGEHGNSQFVAWSTVRVMGQPIVTLAD-----AGDIDLAAIEEEARKGGFTVLNGKGYTSYGVAT 234 (309)
T ss_dssp HHHHTCCGGGCBCCEEBCTTTTCEECTTTCEETTEEGGGC----------CCHHHHHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred HHHhCCChhheEEEEEeCCCCcEeeccccceECCEEHHHhcc-----CCHHHHHHHHHHHHHhHHHHHhccCCchHHHHH
Confidence 999999999999999999999999999999999999988753 346678899999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 412 SVASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 412 a~~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++++++++|+++++.+++++++++| +|+|+|+||+++++|+++++.++|+++|+++|++|++.|++.++.+
T Consensus 235 a~~~~~~ai~~~~~~~~~~~~~~~g-----~~~~~~vP~~i~~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 305 (309)
T 1hyh_A 235 SAIRIAKAVMADAHAELVVSNRRDD-----MGMYLSYPAIIGRDGVLAETTLDLTTDEQEKLLQSRDYIQQRFDEI 305 (309)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEECTT-----TCSEEEEEEEEETTEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcEEEEEEEECC-----CCeEEEEEEEEeCCceEEEeCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 5899999999999999999999999999999999999999887754
No 37
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=100.00 E-value=1.3e-52 Score=428.41 Aligned_cols=292 Identities=24% Similarity=0.365 Sum_probs=263.8
Q ss_pred CCCceEEEEe-cccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE---cCCc-cccCCCcEE
Q psy12825 175 SPDQKITVVG-AGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES---GSDI-AMSEGSRIV 249 (488)
Q Consensus 175 ~~~~KIaIIG-AG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~---ttd~-eal~dADiV 249 (488)
.+++||+||| +|.+|+++++.|+..++..+|+|+|++++ ++.++|+.+... ..++.. ++|+ ++++|||+|
T Consensus 6 ~~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~---~~~v~~~~~t~d~~~al~gaDvV 80 (326)
T 1smk_A 6 APGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDT---GAVVRGFLGQQQLEAALTGMDLI 80 (326)
T ss_dssp --CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCS---SCEEEEEESHHHHHHHHTTCSEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccc---cceEEEEeCCCCHHHHcCCCCEE
Confidence 4568999999 59999999999998887779999999887 778899988542 224544 4576 679999999
Q ss_pred EEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchh----HHHHHHHhcCCCCCcEEeecCChHHH
Q psy12825 250 IITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDV----LTYISWKLSGFPKNRVIGSGTNLDSM 325 (488)
Q Consensus 250 Iitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi----~t~~~~k~sg~p~~rViG~gt~lds~ 325 (488)
|++++.++++|++|.|++..|+++++++++.+.+++|++|++++|||+|+ +++++++.++||++||||+ |.||+.
T Consensus 81 i~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~t~~~~~~~~~p~~rviG~-~~Ld~~ 159 (326)
T 1smk_A 81 IVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGV-TMLDVV 159 (326)
T ss_dssp EECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHHHHTCCCTTSEEEC-CHHHHH
T ss_pred EEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCchHHHHHHHHHHHHHccCCCcccEEEE-eehHHH
Confidence 99999999999999999999999999999999999999999999999998 7777799999999999999 999999
Q ss_pred HHHHHHHHHhCCCCCCceeEEEeec-CCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhc--
Q psy12825 326 RFRVLLAQKLGLSPESVHGFIIGEH-GDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLK-- 402 (488)
Q Consensus 326 R~~~~lA~~Lgv~p~~V~~~V~G~H-G~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~k-- 402 (488)
|++++||+++|++|++|+++||||| |++++|+||++++.+ .+++++|+++.+++++++++|++.|
T Consensus 160 r~~~~la~~l~v~~~~v~~~v~G~H~G~~~~p~~s~~~v~~------------~~~~~~~~~~~~~v~~~g~eii~~k~~ 227 (326)
T 1smk_A 160 RANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPS------------SFTQEEISYLTDRIQNGGTEVVEAKAG 227 (326)
T ss_dssp HHHHHHHHHHTCCGGGCBCCEEECSSGGGEEECGGGCBSCC------------CCCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhCcChhheEEEEecccCCceEEEecccCeecC------------cCCHHHHHHHHHHHHHHHHHHHhcccC
Confidence 9999999999999999999999999 999999999998742 1347789999999999999999976
Q ss_pred -CCcchhhHHHHHHHHHHH---HcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEec-cCCCHHHHHHHHHHH
Q psy12825 403 -GYTSWALGLSVASISHTL---LNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIIN-QNLTPDEAEKLRKSA 477 (488)
Q Consensus 403 -g~t~~s~A~a~~~ii~aI---l~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~-l~L~~~E~~~L~~sa 477 (488)
|+++|++|.++++++++| ++|++.+++++ +++|+ +|+|+|||+||+++++|++++++ ++|+++|+++|++|+
T Consensus 228 ~gs~~~~~a~a~~~~~~ai~~~~~~~~~v~~~~-~~~g~--~~~~~~~~vP~~ig~~Gv~~i~~~~~L~~~e~~~l~~s~ 304 (326)
T 1smk_A 228 AGSATLSMAYAAVKFADACLRGLRGDAGVIECA-FVSSQ--VTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAK 304 (326)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHTCSCEEEEE-EEECC--SSSSSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHhCCCCeEEEEE-eeccc--cCCceEEEEEEEEeCCeeEEEcCCCCCCHHHHHHHHHHH
Confidence 888999999999999999 99999999998 78897 56899999999999999999999 999999999999999
Q ss_pred HHHHHHHHhh
Q psy12825 478 ATISQIQKGL 487 (488)
Q Consensus 478 ~~i~~~~~~~ 487 (488)
+.|++.++.+
T Consensus 305 ~~l~~~~~~~ 314 (326)
T 1smk_A 305 KELAGSIEKG 314 (326)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 38
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=100.00 E-value=2e-47 Score=401.50 Aligned_cols=300 Identities=15% Similarity=0.187 Sum_probs=246.1
Q ss_pred CceEEEEecccchHHH--HHHHHH--cCC-CCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEE
Q psy12825 177 DQKITVVGAGQVGMAC--TYSILT--QGI-YSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVI 250 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~i--a~~La~--~~l-~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVI 250 (488)
++||+|||||++ .+. +..|+. .++ .+||+|+|+++++++. +.++.+...... .+|..++|+ ++++||||||
T Consensus 2 ~~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~-~~~~~~~~~~~~-~~v~~t~d~~~al~~AD~Vi 78 (417)
T 1up7_A 2 HMRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKI-VVDFVKRLVKDR-FKVLISDTFEGAVVDAKYVI 78 (417)
T ss_dssp CCEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHH-HHHHHHHHHTTS-SEEEECSSHHHHHTTCSEEE
T ss_pred CCEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHH-HHHHHHHHhhCC-eEEEEeCCHHHHhCCCCEEE
Confidence 579999999986 332 234566 667 7899999999999986 778877532222 678888897 8999999999
Q ss_pred EecccccCCCcchHh--------------------hHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCC
Q psy12825 251 ITAGVRSLVGETRLQ--------------------LVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGF 310 (488)
Q Consensus 251 itag~~~k~G~~r~d--------------------ll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~ 310 (488)
+++++++++|++|++ ++.+|++++++++++|+++| ++|+||+|||++++|+++++++
T Consensus 79 itagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPvdi~t~a~~k~~-- 155 (417)
T 1up7_A 79 FQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPSGHITEFVRNYL-- 155 (417)
T ss_dssp ECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSHHHHHHHHHHTT--
T ss_pred EcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChHHHHHHHHHHhC--
Confidence 999999988888743 25899999999999999999 9999999999999999999986
Q ss_pred CCCcEEeecCChHHHHHHHHHHHHhCCCCCCceeEEEe-----------ecCCCcccccccc---eecC---cccc-ccC
Q psy12825 311 PKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIG-----------EHGDSSVPVWSGV---NVAG---VTLK-ELN 372 (488)
Q Consensus 311 p~~rViG~gt~lds~R~~~~lA~~Lgv~p~~V~~~V~G-----------~HG~~~vp~~S~a---~v~g---~pl~-e~~ 372 (488)
|++||||+++.+ .|+++.+|+.+|++|++|+++|+| +||++++|.||.. ++.+ .|+. ++.
T Consensus 156 p~~rviG~c~~~--~r~~~~la~~lgv~~~~v~~~v~GlNH~~w~~~~~~hG~d~~p~~~~~~~~~~~~~~~~~~~~~~~ 233 (417)
T 1up7_A 156 EYEKFIGLCNVP--INFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFY 233 (417)
T ss_dssp CCSSEEECCSHH--HHHHHHHHHHTTCCGGGEEEEEEEETTEEEEEEEEETTEECHHHHHHHHTTC---CCTTSCCHHHH
T ss_pred CCCCEEEeCCCH--HHHHHHHHHHhCCCHHHCeEEEEeecceeeEEEeecCCcEehhhHHHHHHHhhCCCcCCchHHHHH
Confidence 777999995554 499999999999999999999999 9999999999996 5555 5662 221
Q ss_pred CCCC--------C-CCChHHHHHH---------HHHHhhhHHHHH----------HhcCCcchhhHHHHHHHHHHHHcCC
Q psy12825 373 PTIG--------T-EQDTENFVRL---------HADVVNSAYEVI----------KLKGYTSWALGLSVASISHTLLNNT 424 (488)
Q Consensus 373 ~~~~--------~-~~~~~~~~el---------~~~v~~~~~eIi----------~~kg~t~~s~A~a~~~ii~aIl~~~ 424 (488)
+.++ . .+.++.++++ .+++++.+++++ ..||++.| +.+++++++||++|+
T Consensus 234 ~~~g~~p~~y~~~y~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~~~~~~~~~l~~kg~t~~--~~~a~~ii~AI~~d~ 311 (417)
T 1up7_A 234 DSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMY--STAAAHLIRDLETDE 311 (417)
T ss_dssp HHHCSEECGGGHHHHTHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTCSSCCGGGGGSTTTTH--HHHHHHHHHHHHSSS
T ss_pred HhcCCCccchhhhccCCHHHHHhccccchHHHHHHHHHHHHHHHHHhhcccchhhhhcCCcHH--HHHHHHHHHHHHcCC
Confidence 1000 0 0123333443 466777788988 45666644 778999999999999
Q ss_pred CcEEEEEeeecCcC-CCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHh
Q psy12825 425 NKIHAVSTLIQGHH-GIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKG 486 (488)
Q Consensus 425 ~~v~~vsv~~~G~y-gl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~ 486 (488)
+.++++|++|+|+| |+|+|+++|+||+||++|++++..++|+++|+++++.++...+..++.
T Consensus 312 ~~~~~vsv~n~G~i~~lp~d~~vevP~~vg~~Gi~~i~~~~L~~~e~~~l~~~~~~e~l~veA 374 (417)
T 1up7_A 312 GKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEA 374 (417)
T ss_dssp CEEEEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEecCCccCCCCCCeEEEEeEEEeCCceEEeecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 899999999999999999999999999999999999999888866654
No 39
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=100.00 E-value=9.3e-46 Score=374.12 Aligned_cols=312 Identities=37% Similarity=0.688 Sum_probs=281.1
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
.+++||+|||+|.||+.++..|+..+..++|+|+|++++++++.+.++.+...+....++..+++++++++||+||++++
T Consensus 5 ~~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 5 VKPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAG 84 (319)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCC
Confidence 34579999999999999999999998777999999999888877778776543222456666668899999999999999
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHH
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQK 334 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~ 334 (488)
.++++|++|.|++.+|+++++++++.|.+++|++++++++||++.+++++++.+++|+++|+|.+|.+|+.|++..+++.
T Consensus 85 ~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~~~~~~~~~~~~~~~~~vig~~~~l~~~r~~~~~a~~ 164 (319)
T 1lld_A 85 PRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVAQKLTGLPENQIFGSGTNLDSARLRFLIAQQ 164 (319)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHTCCTTSEEECTTHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchHHHHHHHHHhcCCCHHHEeeccccHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred hCCCCCCceeEEEeecCCCcccccccceecCccccccCCCCCCC-CChHHHHHHHHHHhhhHHHHHHhcCCcchhhHHHH
Q psy12825 335 LGLSPESVHGFIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTE-QDTENFVRLHADVVNSAYEVIKLKGYTSWALGLSV 413 (488)
Q Consensus 335 Lgv~p~~V~~~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~-~~~~~~~el~~~v~~~~~eIi~~kg~t~~s~A~a~ 413 (488)
+++++.+++.++||+||++++|+|+++.+++.|+.++....+.. .+++.++++.+.++..+++|++.+|.+.|+++.+.
T Consensus 165 ~~v~~~~v~~~~~G~~g~~~~~~w~k~~in~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~v~~~~G~~~~~~a~~~ 244 (319)
T 1lld_A 165 TGVNVKNVHAYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYKIINGKGATNYAIGMSG 244 (319)
T ss_dssp HTCCGGGEECCEEBSSSTTCEECTTSCEETTEEGGGCCCCTTCCCCCHHHHHHHHHHHHHHHHHHHTSCCSCCHHHHHHH
T ss_pred hCCCHHHeEEEEEeCCCCceeeeeecceECCccHHHHHhccccccCCHHHHHHHHHHHHHhhHhhhhCCCCchHHHHHHH
Confidence 99999999999999999999999999999999998875432222 34445788888999999999999999999999999
Q ss_pred HHHHHHHHcCCCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Q psy12825 414 ASISHTLLNNTNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATISQIQKGL 487 (488)
Q Consensus 414 ~~ii~aIl~~~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~~~~~~~ 487 (488)
++++++|+++++.++++|++++|+|+. .+.++++||.++++|++++++++|+++|+++|++|++.|++.++.+
T Consensus 245 ~sm~~di~~~~~~ei~~s~~~~G~~~~-~~~~~gvp~~~~~~Gv~~i~~~~l~~~e~~~l~~s~~~l~~~~~~~ 317 (319)
T 1lld_A 245 VDIIEAVLHDTNRILPVSSMLKDFHGI-SDICMSVPTLLNRQGVNNTINTPVSDKELAALKRSAETLKETAAQF 317 (319)
T ss_dssp HHHHHHHHTTCCEEEEEEEECSSBTTB-CSSEEEEEEEEETTEEECCSCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCcEEEEEEEecCcCCc-cceEEEEEEEEeCCeeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999987 6899999999999999999999999999999999999999998765
No 40
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=100.00 E-value=6.1e-45 Score=370.82 Aligned_cols=303 Identities=19% Similarity=0.274 Sum_probs=267.5
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCC-----CeEEEEeCCh--hHHHHHHHHHhhcCCCCCCCcEEEcCC-ccccCCC
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIY-----SNFCLIDSNE--DRCKGEMLDLQHGAPFLRSPKIESGSD-IAMSEGS 246 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~-----~el~L~Di~~--e~l~g~~~dL~~~~~~~~~~~v~~ttd-~eal~dA 246 (488)
+++||+|+|| |.+|++++..|+.++.. .+|+++|+++ +++++..+|+.|.. +.....+..+.+ +++++|+
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~-~~~~~di~~~~~~~~a~~~~ 81 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-FPLLAGLEATDDPKVAFKDA 81 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEEESCHHHHTTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccc-ccccCCeEeccChHHHhCCC
Confidence 4579999998 99999999999988764 3899999975 56777888998753 111234555455 4789999
Q ss_pred cEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEeCCchhHHHHHHHhc-CCCCCcEEeecCChHH
Q psy12825 247 RIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIISNPVDVLTYISWKLS-GFPKNRVIGSGTNLDS 324 (488)
Q Consensus 247 DiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~TNPvdi~t~~~~k~s-g~p~~rViG~gt~lds 324 (488)
|+||.+++.+++++++|.+++..|+.+.+++++.+.+++ |+++++++|||++.++++..+.+ ++||.+++|. |.+|+
T Consensus 82 D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~-tkl~~ 160 (327)
T 1y7t_A 82 DYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAM-TRLDH 160 (327)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEEC-CHHHH
T ss_pred CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheecc-chHHH
Confidence 999999999998999999999999999999999999997 99999999999999999888877 7999999988 99999
Q ss_pred HHHHHHHHHHhCCCCCCcee-EEEeecCCCcccccccceecCccccccCCCCCCCCChHHHHHHHHHHhhhHHHHHHhcC
Q psy12825 325 MRFRVLLAQKLGLSPESVHG-FIIGEHGDSSVPVWSGVNVAGVTLKELNPTIGTEQDTENFVRLHADVVNSAYEVIKLKG 403 (488)
Q Consensus 325 ~R~~~~lA~~Lgv~p~~V~~-~V~G~HG~~~vp~~S~a~v~g~pl~e~~~~~~~~~~~~~~~el~~~v~~~~~eIi~~kg 403 (488)
.|+.+.+++.+|+++..++. +|||+||++++|+|+++.++|+|+.++.+. +..++++.+++++++++|++.||
T Consensus 161 er~~~~~a~~~g~~~~~vr~~~V~G~h~~~~~~~~~~~~~~g~~l~~~~~~------~~~~~~~~~~v~~~g~~ii~~kg 234 (327)
T 1y7t_A 161 NRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDM------EWYEKVFIPTVAQRGAAIIQARG 234 (327)
T ss_dssp HHHHHHHHHHHTCCGGGEECCEEEBCSSTTCEEECSSCEETTEEGGGTSCH------HHHHHTHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCcChhheeeeEEEcCCCCeEEEEeeeeeeCCeeHHHhccc------hhHHHHHHHHHHHHHHHHHHccC
Confidence 99999999999999999995 799999999999999999999999876421 12247899999999999999999
Q ss_pred Ccchh-hHHHHHHHHHHHHcC--CCcEEEEEeeecCcCCCCCceEEEEEEEEcCCceEEEec-cCCCHHHHHHHHHHHHH
Q psy12825 404 YTSWA-LGLSVASISHTLLNN--TNKIHAVSTLIQGHHGIEEEVFLSLPCVMADNGVTHIIN-QNLTPDEAEKLRKSAAT 479 (488)
Q Consensus 404 ~t~~s-~A~a~~~ii~aIl~~--~~~v~~vsv~~~G~ygl~~d~~~svPv~igk~Gv~~i~~-l~L~~~E~~~L~~sa~~ 479 (488)
.++|+ +|.++++++++|++| ++++++++++++|+||+|+|+|||+||++ ++|++++++ ++|+++|+++|++|++.
T Consensus 235 ~~~~~~~a~a~~~~~~~i~~~~~~~~~~~~~~~~~g~yg~~~~~~~~~P~~i-~~G~~~i~~~~~l~~~e~~~l~~s~~~ 313 (327)
T 1y7t_A 235 ASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTA-KDGAYRVVEGLEINEFARKRMEITAQE 313 (327)
T ss_dssp SCCHHHHHHHHHHHHHHHHTBCCTTCCEEEEEECSSGGGCCTTSEEEEEEEE-ETTEEEECCCCCCCHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHcCCCCCeEEEEEEEecCccCCCCCeEEEEEEEE-cCCeEEecCCCCCCHHHHHHHHHHHHH
Confidence 87775 578999999999999 68999999999999999999999999999 999999988 99999999999999999
Q ss_pred HHHHHHhh
Q psy12825 480 ISQIQKGL 487 (488)
Q Consensus 480 i~~~~~~~ 487 (488)
|++.++.+
T Consensus 314 l~~~~~~~ 321 (327)
T 1y7t_A 314 LLDEMEQV 321 (327)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99888764
No 41
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=100.00 E-value=4.2e-46 Score=394.90 Aligned_cols=298 Identities=17% Similarity=0.211 Sum_probs=241.5
Q ss_pred CceEEEEecccc-hHHHHHHHHH--cCC-CCeEEEEeCCh--hHHHHHHHHHhhcC--CCCCCCcEEEcCCc-cccCCCc
Q psy12825 177 DQKITVVGAGQV-GMACTYSILT--QGI-YSNFCLIDSNE--DRCKGEMLDLQHGA--PFLRSPKIESGSDI-AMSEGSR 247 (488)
Q Consensus 177 ~~KIaIIGAG~v-G~~ia~~La~--~~l-~~el~L~Di~~--e~l~g~~~dL~~~~--~~~~~~~v~~ttd~-eal~dAD 247 (488)
++||+|||||++ |..++..|+. .++ .++|+|+|+++ +++++. .++.+.. ......+|..++|+ ++++|||
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~-~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD 85 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIV-GALAKRMVEKAGVPIEIHLTLDRRRALDGAD 85 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHH-HHHHHHHHHHTTCCCEEEEESCHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHH-HHHHHHHHhhcCCCcEEEEeCCHHHHhCCCC
Confidence 579999999998 6666777877 566 67999999999 998873 4555432 13345788888897 7999999
Q ss_pred EEEEecccccCCCcchHhh--------------------HhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHh
Q psy12825 248 IVIITAGVRSLVGETRLQL--------------------VDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKL 307 (488)
Q Consensus 248 iVIitag~~~k~G~~r~dl--------------------l~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~ 307 (488)
|||++++.++++|++|+++ +.+|++++++++++|+++||++|+|++|||+|++|++++++
T Consensus 86 ~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~ 165 (450)
T 1s6y_A 86 FVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRY 165 (450)
T ss_dssp EEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHH
T ss_pred EEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh
Confidence 9999999999888888744 78999999999999999999999999999999999999998
Q ss_pred cCCCCCcEEeecCChHHHHHHHHHHHHhCCCCCCceeEEEe-----------ecCCCcccccccceec----C-------
Q psy12825 308 SGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIG-----------EHGDSSVPVWSGVNVA----G------- 365 (488)
Q Consensus 308 sg~p~~rViG~gt~lds~R~~~~lA~~Lgv~p~~V~~~V~G-----------~HG~~~vp~~S~a~v~----g------- 365 (488)
+ |++||||+ |+.. .|+++.+|+.||++|++|+++|+| +||++++|.|+...++ |
T Consensus 166 ~--p~~rViG~-c~~~-~r~~~~la~~lgv~~~~v~~~v~GlNH~~w~~~v~~~G~d~~p~~~~~~~~~~~~g~~~~~~~ 241 (450)
T 1s6y_A 166 T--KQEKVVGL-CNVP-IGMRMGVAKLLGVDADRVHIDFAGLNHMVFGLHVYLDGVEVTEKVIDLVAHPDRSGVTMKNIV 241 (450)
T ss_dssp C--CCCCEEEC-CSHH-HHHHHHHHHHHTSCGGGEEEEEEEETTEEEEEEEEETTEECHHHHHHHHSCC-----------
T ss_pred C--CCCCEEEe-CCcH-HHHHHHHHHHhCCCHHHcEEEEEeeecceeEEEeeeCCcCchHhHHHHHhhhccccccccccc
Confidence 6 77799999 5554 499999999999999999999999 8999999999886543 2
Q ss_pred -cccc------------ccCCCCCCCCChHH-------------HHHHHHHHhhhHHHHH-----HhcC-----Ccchhh
Q psy12825 366 -VTLK------------ELNPTIGTEQDTEN-------------FVRLHADVVNSAYEVI-----KLKG-----YTSWAL 409 (488)
Q Consensus 366 -~pl~------------e~~~~~~~~~~~~~-------------~~el~~~v~~~~~eIi-----~~kg-----~t~~s~ 409 (488)
.|+. +|.+++ .+.++. +.++.+++++.+++++ ..|+ .+++++
T Consensus 242 ~~~~~~~~~~~~g~~p~~y~~yy--~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ei~~~~~~~~k~~~~~~~~~~~~ 319 (450)
T 1s6y_A 242 DLGWEPDFLKGLKVLPCPYHRYY--FQTDKMLAEELEAAKTKGTRAEVVQQLEKELFELYKDPNLAIKPPQLEKRGGAYY 319 (450)
T ss_dssp -CCCCHHHHHHHCSBCCGGGHHH--HSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTCC-----------CCSCCH
T ss_pred cCccHHHHHHhcCCccchhhhhh--cCCHHHHHhhhccccccchHHHHHHHHHHHHHHHHhhhccccccchhhcccchHH
Confidence 2331 111110 011222 1244566777778888 4443 445577
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeeecCcC-CCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHHHHH
Q psy12825 410 GLSVASISHTLLNNTNKIHAVSTLIQGHH-GIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAATIS 481 (488)
Q Consensus 410 A~a~~~ii~aIl~~~~~v~~vsv~~~G~y-gl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~~i~ 481 (488)
|.++++|++||++|++.++++|++++|+| |+|+|+++|+||+||++|++++..++|+++|+++++.++..=+
T Consensus 320 ~~~a~~ii~AI~~d~~~~~~vsv~n~G~i~~lp~d~~vevP~vvg~~Gi~~i~~~~L~~~e~~l~~~~~~~e~ 392 (450)
T 1s6y_A 320 SDAACSLISSIYNDKRDIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAVGDLPVAVRGLVQQIKSFER 392 (450)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCCBCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeecCceecCCCCCeEEEEeEEEcCCCeEEeecCCCCHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999997 8999999999999999999999999999999999999875443
No 42
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=100.00 E-value=3.3e-44 Score=382.17 Aligned_cols=298 Identities=14% Similarity=0.196 Sum_probs=234.4
Q ss_pred CCceEEEEecccc-hHHHHHHHHHc--CC-CCeEEEEeCChhHHHHHHHHHhhcC--CCCCCCcEEEcCCc-cccCCCcE
Q psy12825 176 PDQKITVVGAGQV-GMACTYSILTQ--GI-YSNFCLIDSNEDRCKGEMLDLQHGA--PFLRSPKIESGSDI-AMSEGSRI 248 (488)
Q Consensus 176 ~~~KIaIIGAG~v-G~~ia~~La~~--~l-~~el~L~Di~~e~l~g~~~dL~~~~--~~~~~~~v~~ttd~-eal~dADi 248 (488)
+++||+|||||++ +..++..|+.+ ++ ..+|+|+|++++++++. .++.+.. ......+|..++|+ ++++||||
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~-~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~ 105 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRI-AGACDVFIREKAPDIEFAATTDPEEAFTDVDF 105 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHH-HHHHHHHHHHHCTTSEEEEESCHHHHHSSCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHH-HHHHHHHhccCCCCCEEEEECCHHHHHcCCCE
Confidence 4579999999998 44467788887 77 67999999999999874 5665532 12345788888998 78999999
Q ss_pred EEEecccccCCCcchHhh--------------------HhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhc
Q psy12825 249 VIITAGVRSLVGETRLQL--------------------VDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLS 308 (488)
Q Consensus 249 VIitag~~~k~G~~r~dl--------------------l~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~s 308 (488)
||++++.++++|++|+++ +.+|++++++++++|+++||++|+|++|||+|++|+++++.+
T Consensus 106 VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~ 185 (472)
T 1u8x_X 106 VMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLR 185 (472)
T ss_dssp EEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHS
T ss_pred EEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhC
Confidence 999999988888777444 789999999999999999999999999999999999999986
Q ss_pred CCCCCcEEeecCChHHHHHHHHHHHHhCCCC-CCceeEEEe-----------e-cCCCccccccccee-cC-c-------
Q psy12825 309 GFPKNRVIGSGTNLDSMRFRVLLAQKLGLSP-ESVHGFIIG-----------E-HGDSSVPVWSGVNV-AG-V------- 366 (488)
Q Consensus 309 g~p~~rViG~gt~lds~R~~~~lA~~Lgv~p-~~V~~~V~G-----------~-HG~~~vp~~S~a~v-~g-~------- 366 (488)
|++||||+ |+.. .|+++.+|+.||++| ++|+++|+| + ||++++|.||...+ +| .
T Consensus 186 --p~~rViG~-c~~~-~r~~~~la~~lgv~~~~~v~~~v~GlNH~~W~~~~~~~hG~d~~p~~~~~~~~~g~~~~~~~~~ 261 (472)
T 1u8x_X 186 --PNSKILNI-CDMP-VGIEDRMAQILGLSSRKEMKVRYYGLNHFGWWTSIQDQEGNDLMPKLKEHVSQYGYIPKTEAEA 261 (472)
T ss_dssp --TTCCEEEC-CSHH-HHHHHHHHHHHTCSCGGGEEEEEEEETTEEEEEEEEETTCCBCHHHHHHHHHHHSSCCCC----
T ss_pred --CCCCEEEe-CCcH-HHHHHHHHHHhCcCchhceeEEEeccchhhheeeeEeCCCCEehHhHHHHHHhcCCCccccccc
Confidence 77899999 5553 499999999999998 999999999 8 99999999998654 33 1
Q ss_pred ---ccc-cc-------------CCC-C-CCCC-ChHHHHH-H-----HHHHhh----hHHHHHH-h--cC---Ccch---
Q psy12825 367 ---TLK-EL-------------NPT-I-GTEQ-DTENFVR-L-----HADVVN----SAYEVIK-L--KG---YTSW--- 407 (488)
Q Consensus 367 ---pl~-e~-------------~~~-~-~~~~-~~~~~~e-l-----~~~v~~----~~~eIi~-~--kg---~t~~--- 407 (488)
++. ++ .|. + ..++ .++.+++ . .+.++. ..+++++ . ++ .+.|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~e~~p~~Yl~yy~~~~~~~e~~~~~~~r~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (472)
T 1u8x_X 262 VEASWNDTFAKARDVQAADPDTLPNTYLQYYLFPDDMVKKSNPNHTRANEVMEGREAFIFSQCDMITREQSSENSEIKID 341 (472)
T ss_dssp ---CTTSHHHHHHHHHHTSTTSEECGGGHHHHSHHHHHTTSCSSSCHHHHHHHHTTTTTTTTHHHHHHHTSCCSCSSCCC
T ss_pred cccchHHHHHhhcCccccccccCCccchhcccCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcCCccccccccc
Confidence 111 11 110 0 0000 0111111 0 111112 2222233 3 55 4445
Q ss_pred hhHHHHHHHHHHHHcCCCcEEEEEeeecCcC-CCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHHHHH
Q psy12825 408 ALGLSVASISHTLLNNTNKIHAVSTLIQGHH-GIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRKSAA 478 (488)
Q Consensus 408 s~A~a~~~ii~aIl~~~~~v~~vsv~~~G~y-gl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~sa~ 478 (488)
+++.++++|++||++|++.++++|++|+|+| |+|+|+++|+||+||++|++++..++|+++|+++++.-..
T Consensus 342 ~~~~~a~~ii~AI~~d~~~v~~vsv~n~G~i~glp~d~~veVP~vvg~~Gi~pi~~~~Lp~~~~~l~~~~~~ 413 (472)
T 1u8x_X 342 DHASYIVDLARAIAYNTGERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITVGTIPQFQKGLMEQQVS 413 (472)
T ss_dssp TTTHHHHHHHHHHHHTCCEEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCCBCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEeecCceecCcCCCeEEEEeEEEcCCCceEeecCCCCHHHHHHHHHHHH
Confidence 8999999999999999999999999999997 8999999999999999999999999999999999987543
No 43
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=100.00 E-value=5.1e-38 Score=332.14 Aligned_cols=293 Identities=18% Similarity=0.197 Sum_probs=221.1
Q ss_pred CCCceEEEEecccch--HHHHHHHHHcC-CCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEE
Q psy12825 175 SPDQKITVVGAGQVG--MACTYSILTQG-IYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVI 250 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG--~~ia~~La~~~-l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVI 250 (488)
|+.+||+|||||++| .+++..|+... +..+|+|+|+++++++.... +.+.... ...+|+.|+|+ +|++||||||
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~e~le~~~~-~~~~l~~-~~~~I~~TtD~~eAl~dADfVI 80 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEV-IGNHSGN-GRWRYEAVSTLKKALSAADIVI 80 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSHHHHHHHHH-HHTTSTT-SCEEEEEESSHHHHHTTCSEEE
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCHHHHHHHHH-HHHHHhc-cCCeEEEECCHHHHhcCCCEEE
Confidence 456899999999996 46777777643 33499999999988765422 3222211 45678889998 6899999999
Q ss_pred Eecc------------cccCCCcchH--hh--------HhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhc
Q psy12825 251 ITAG------------VRSLVGETRL--QL--------VDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLS 308 (488)
Q Consensus 251 itag------------~~~k~G~~r~--dl--------l~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~s 308 (488)
++++ +|+|+|+.|. |. ..+|++++++++++|+++||++|+|++|||+|++|+++++.
T Consensus 81 ~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~- 159 (450)
T 3fef_A 81 ISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKV- 159 (450)
T ss_dssp ECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHH-
T ss_pred eccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHH-
Confidence 9985 5788888665 54 45999999999999999999999999999999999999987
Q ss_pred CCCCCcEEeecCChHHHHHHHHHHHHh----C---CCCCCceeEEEe-ecCCCcccccccceecCccccccC----C---
Q psy12825 309 GFPKNRVIGSGTNLDSMRFRVLLAQKL----G---LSPESVHGFIIG-EHGDSSVPVWSGVNVAGVTLKELN----P--- 373 (488)
Q Consensus 309 g~p~~rViG~gt~lds~R~~~~lA~~L----g---v~p~~V~~~V~G-~HG~~~vp~~S~a~v~g~pl~e~~----~--- 373 (488)
+|++||||+ |+.. .++++.+|+.| | +++++|+..++| || +.||++++++|+++.+.+ .
T Consensus 160 -~p~~rviG~-C~~~-~~~~~~~a~~l~~~lg~~~~~~~~v~~~~~GlNH----~~w~~~~~~~G~d~~p~l~~~~~~~~ 232 (450)
T 3fef_A 160 -FPGIKAIGC-CHEV-FGTQKLLAEMVTERLGIEVPRREDIRVNVLGINH----FTWITKASYRHIDLLPIFREFSAHYG 232 (450)
T ss_dssp -CTTCEEEEC-CSHH-HHHHHHHHHHHHHHHCCCCSCGGGEEEEEEEETT----EEEEEEEEETTEEHHHHHHHHHHHHT
T ss_pred -CCCCCEEEe-CCcH-HHHHHHHHHHHHhhcCCCCCChhHeEEEEeeecC----eEeEEEEEECCEEChHHHHHHHHhhc
Confidence 688999999 8875 78999999999 5 779999999999 99 999999999998765411 0
Q ss_pred --CCC--------CCC-----------------------------------ChHH---------H--HHHHHHHhhhHHH
Q psy12825 374 --TIG--------TEQ-----------------------------------DTEN---------F--VRLHADVVNSAYE 397 (488)
Q Consensus 374 --~~~--------~~~-----------------------------------~~~~---------~--~el~~~v~~~~~e 397 (488)
.+. ..+ +++. | ++..+.. +.-.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~ey~p~~Y~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~ 311 (450)
T 3fef_A 233 ESGYELEGECWRDSVFCSAHRVAFDLFETYGAIPAAGDRHLAEFLPGPYLKQPEVWKFHLTPISFRKQDRAEKR-QETER 311 (450)
T ss_dssp TTCCCCTTCCTTSCTTCCCSHHHHHHHHHHSSEECSCHHHHTTSSCSSGGGCTTTTTCCCCCHHHHHHHHHHHH-HHHHH
T ss_pred ccccccccccccccccchhhHHHHHHHHHcCCcccccccchhcccchhhcCCHHHhcccccchhhHHHHHHHHH-HHHHH
Confidence 000 000 0000 1 0000000 00011
Q ss_pred HHHhcCC-cchhhHHHHHHHHHHHHcCCCcEEEEEeeecCcC-CCCCceEEEEEEEEcCCceEEEeccCCCHHHHHHHHH
Q psy12825 398 VIKLKGY-TSWALGLSVASISHTLLNNTNKIHAVSTLIQGHH-GIEEEVFLSLPCVMADNGVTHIINQNLTPDEAEKLRK 475 (488)
Q Consensus 398 Ii~~kg~-t~~s~A~a~~~ii~aIl~~~~~v~~vsv~~~G~y-gl~~d~~~svPv~igk~Gv~~i~~l~L~~~E~~~L~~ 475 (488)
....... ..-..+.+++++++||++|++.++++|++|+|.| |+|+|+++|+||+|+++|+.++..++||+.++++++.
T Consensus 312 ~~~~~~~~~~~~~~e~~~~ii~aI~~d~~~~~~vnv~n~G~i~~lp~d~~vevP~~v~~~Gi~pi~~g~Lp~~~~~l~~~ 391 (450)
T 3fef_A 312 LIVQQRGVAEKASGEEGVNIIAALLGLGELVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQPILSGALPKGVEMLAAR 391 (450)
T ss_dssp HHHTTCCCCCSCCSCCHHHHHHHHTTSCCEEEEEEEECSSSSTTSCTTSEEEEEEEEETTEEEEBCCCCCCHHHHHHHHH
T ss_pred HhcCCcCcCcCccHHHHHHHHHHHHcCCCeEEEEEeecCcEecCCCCCeEEEEEEEEcCCCceecccCCCCHHHHHHHHH
Confidence 1111000 0001123468999999999999999999999996 9999999999999999999999989999999999876
Q ss_pred HHH
Q psy12825 476 SAA 478 (488)
Q Consensus 476 sa~ 478 (488)
-..
T Consensus 392 ~~~ 394 (450)
T 3fef_A 392 HIS 394 (450)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 44
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=100.00 E-value=9.8e-37 Score=324.69 Aligned_cols=293 Identities=21% Similarity=0.198 Sum_probs=216.3
Q ss_pred CCCceEEEEecccchHHH--HHHHHH-cCC-CCeEEEEeCChhHHHHHHHHHhhcC-CCCCCCcEEEcCCc-cccCCCcE
Q psy12825 175 SPDQKITVVGAGQVGMAC--TYSILT-QGI-YSNFCLIDSNEDRCKGEMLDLQHGA-PFLRSPKIESGSDI-AMSEGSRI 248 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~i--a~~La~-~~l-~~el~L~Di~~e~l~g~~~dL~~~~-~~~~~~~v~~ttd~-eal~dADi 248 (488)
|+++||+|||||+||++. +..|+. .++ ..+|+|+|++++++++......+.. ......+|..++|+ ++++||||
T Consensus 1 m~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~ 80 (480)
T 1obb_A 1 MPSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADF 80 (480)
T ss_dssp -CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCE
Confidence 346799999999987655 557764 344 6799999999999987544333321 12245788888998 78999999
Q ss_pred EEEeccc------------ccCCCcch--Hh------------hHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHH
Q psy12825 249 VIITAGV------------RSLVGETR--LQ------------LVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTY 302 (488)
Q Consensus 249 VIitag~------------~~k~G~~r--~d------------ll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~ 302 (488)
||++++. |.|+|+.+ .+ ++.+|++++++++++|+++||+||+|++|||++++|+
T Consensus 81 VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~ 160 (480)
T 1obb_A 81 VINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTT 160 (480)
T ss_dssp EEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHH
T ss_pred EEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHH
Confidence 9999976 45666655 44 4789999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEeecCChHHHHHHHHHHHHhCCCCCCceeEEEe-ecCCCcccccccceecCcccc------------
Q psy12825 303 ISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIG-EHGDSSVPVWSGVNVAGVTLK------------ 369 (488)
Q Consensus 303 ~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lgv~p~~V~~~V~G-~HG~~~vp~~S~a~v~g~pl~------------ 369 (488)
++++ +|++||||+++.+++ +++++ +.+|++|++|+++|+| || +.||.+.+.+|.++.
T Consensus 161 ~~~k---~p~~rviG~c~~~~~--~~~~l-~~lgv~~~~v~~~v~GlNH----~~w~~~~~~~G~D~~p~l~~~~~~~~~ 230 (480)
T 1obb_A 161 LVTR---TVPIKAVGFCHGHYG--VMEIV-EKLGLEEEKVDWQVAGVNH----GIWLNRFRYNGGNAYPLLDKWIEEKSK 230 (480)
T ss_dssp HHHH---HSCSEEEEECSGGGH--HHHHH-HHTTCCGGGEEEEEEEETT----EEEEEEEEETTEECHHHHHHHHHHTGG
T ss_pred HHHH---CCCCcEEecCCCHHH--HHHHH-HHhCCCHHHceEEEEeecc----hhhhhheeeCCeEcHHHHHHHHHccCc
Confidence 9988 688999999666664 78999 9999999999999999 99 777766666554321
Q ss_pred -----------------------------------ccC------C---CCCCC--CCh-----HHH----HHHHHHHhhh
Q psy12825 370 -----------------------------------ELN------P---TIGTE--QDT-----ENF----VRLHADVVNS 394 (488)
Q Consensus 370 -----------------------------------e~~------~---~~~~~--~~~-----~~~----~el~~~v~~~ 394 (488)
+|. + ++.+. ... .++ .+..+.+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~~y~~~~~~~~~~yyy~~~~~~~~~~~~~~~~~~~~~e~~~~~e~~ 310 (480)
T 1obb_A 231 DWKPENPFNDQLSPAAIDMYRFYGVMPIGDTVRNSSWRYHRDLETKKKWYGEPWGGADSEIGWKWYQDTLGKVTEITKKV 310 (480)
T ss_dssp GCCCSSTTCCTTSHHHHHHHHHHSSCEEGGGTTSCCGGGGSSHHHHHHHHCTTTTSTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhHHHHHHHhcCCeecCCCCCCcCcccccccCccccccchhhcccccccccHhHHHHHHHHHHHHHHH
Confidence 111 1 00000 000 011 1111111122
Q ss_pred HHHHHHhc---C--------Ccch----------------hhHHHHHHHHHHHHcCCCcEEEEEeeecCc-CCCCCceEE
Q psy12825 395 AYEVIKLK---G--------YTSW----------------ALGLSVASISHTLLNNTNKIHAVSTLIQGH-HGIEEEVFL 446 (488)
Q Consensus 395 ~~eIi~~k---g--------~t~~----------------s~A~a~~~ii~aIl~~~~~v~~vsv~~~G~-ygl~~d~~~ 446 (488)
-+++++.. . .++| ..+..++.+++||++|.+.++.+||.|+|. .|+|+|+++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ge~a~~ii~ai~~~~~~~~~vnv~N~G~I~~lp~d~vV 390 (480)
T 1obb_A 311 AKFIKENPSVRLSDLGSVLGKDLSEKQFVLEVEKILDPERKSGEQHIPFIDALLNDNKARFVVNIPNKGIIHGIDDDVVV 390 (480)
T ss_dssp HHHHHHCTTCCGGGCSSSSCCSHHHHHHHHHHHHHHCTTCCCSCSHHHHHHHHHHCCCEEEEEEEECTTSSTTSCTTSEE
T ss_pred HHHHhcCCccccccccccccccccccccccccccccccchhhhHHHHHHHHHHHhCCCeEEEEEeeCCceeCCCCCCeEE
Confidence 22333222 1 0111 112457899999999999999999999997 899999999
Q ss_pred EEEEEEcCCceEEEeccC-CCHHHHHH-HHHHH
Q psy12825 447 SLPCVMADNGVTHIINQN-LTPDEAEK-LRKSA 477 (488)
Q Consensus 447 svPv~igk~Gv~~i~~l~-L~~~E~~~-L~~sa 477 (488)
|+||+|+++|++++...+ ||+..+++ ++.-.
T Consensus 391 Evp~~v~~~G~~p~~~g~~lP~~~~~l~~~~~~ 423 (480)
T 1obb_A 391 EVPALVDKNGIHPEKIEPPLPDRVVKYYLRPRI 423 (480)
T ss_dssp EEEEEEETTEEEECCCSSCCCHHHHHHTHHHHH
T ss_pred EEEEEEcCCCCEeeccCCCCCHHHHhHHHHHHH
Confidence 999999999999998888 99999998 66543
No 45
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=100.00 E-value=5.7e-35 Score=311.81 Aligned_cols=284 Identities=20% Similarity=0.198 Sum_probs=208.6
Q ss_pred ceEEEEecccchHHH--HHHHHHcC----CCCeEEEEeCChhHHHHHHHHHhhcCC-CCCCCcEEEcCCc-cccCCCcEE
Q psy12825 178 QKITVVGAGQVGMAC--TYSILTQG----IYSNFCLIDSNEDRCKGEMLDLQHGAP-FLRSPKIESGSDI-AMSEGSRIV 249 (488)
Q Consensus 178 ~KIaIIGAG~vG~~i--a~~La~~~----l~~el~L~Di~~e~l~g~~~dL~~~~~-~~~~~~v~~ttd~-eal~dADiV 249 (488)
+||+|||||++|++. ...++... ..++|+|+|++++++++...++++... .....+|+.|+|+ +||+|||||
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~gAD~V 80 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEGADFI 80 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSEE
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCCCCEE
Confidence 699999999998763 33344432 246999999999999998888887643 2245789999998 689999999
Q ss_pred EEeccc-------------------ccCCCcchHhhH---------------hhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 250 IITAGV-------------------RSLVGETRLQLV---------------DRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 250 Iitag~-------------------~~k~G~~r~dll---------------~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
|++++. |+|+|++|.++. .+|++++.+++++|+++||+||+||+||
T Consensus 81 i~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~P~A~~in~tN 160 (477)
T 3u95_A 81 INTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMAPKAYLMQTAN 160 (477)
T ss_dssp EECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhCCCeEEEEecC
Confidence 999863 457887766653 2589999999999999999999999999
Q ss_pred CchhHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHhCCCCCCceeEEEe-ecCCCcccccccceecCccccccC--
Q psy12825 296 PVDVLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIG-EHGDSSVPVWSGVNVAGVTLKELN-- 372 (488)
Q Consensus 296 Pvdi~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lgv~p~~V~~~V~G-~HG~~~vp~~S~a~v~g~pl~e~~-- 372 (488)
|++++|++++++++. |++|+ |+... ....+++.||+++++|+..+.| || +.||...+.+|+++...+
T Consensus 161 P~~i~t~a~~~~~~~---k~vGl-C~~~~--~~~~~~~~Lg~~~~~v~~~~~GlNH----~~w~~~~~~~G~D~~P~l~~ 230 (477)
T 3u95_A 161 PVFEITQAVRRWTGA---NIIGF-CHGVA--GVYEVFERLGLDPEEVDWQVAGVNH----GIWLNRFRYRGKDAYPLLDE 230 (477)
T ss_dssp CHHHHHHHHHHHHCC---CEEEE-CCGGG--HHHHHHHHTTCCGGGEEEEEEEETT----EEEEEEEEETTEECHHHHHH
T ss_pred hHHHHHHHHHHhCCC---CeEEE-CCCHH--HHHHHHHHhCCCHHHcEEEEeecCC----CeeeeeeeecCCcccHHHHH
Confidence 999999999998875 79999 88653 3456778899999999999999 88 777777777665432100
Q ss_pred ---------------------------------C--------CCCCCCChHH----------------HHHHHHHHhhhH
Q psy12825 373 ---------------------------------P--------TIGTEQDTEN----------------FVRLHADVVNSA 395 (488)
Q Consensus 373 ---------------------------------~--------~~~~~~~~~~----------------~~el~~~v~~~~ 395 (488)
| ++.+.+..+. +..+.+.++...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~d~~r~~g~~p~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 310 (477)
T 3u95_A 231 WIEKELSKWEPKNPWDTQMSPAAMDMYRFYGMLPIGDTVRNGTWKYHYNLETKKKWFRRFGGIDNEVERPKFHEHLRRAR 310 (477)
T ss_dssp HHHHHTTTCCCSSTTCCTTSHHHHHHHHHHSSCEEGGGGTSCCGGGTSSHHHHHHHHCTTCCSSSTTHHHHHHHHHHHHH
T ss_pred HHHhhcccccccCccccccchHHHHHHHHhCCcccccccccccchhhhhHHHHHHHHHHhcccchhhhhhhHHHHHHHHH
Confidence 0 0000011110 001111111111
Q ss_pred -------HHHHHh--------c-----CCcchhhHHHHHHHHHHHHcCCCcEEEEEeeecCc-CCCCCceEEEEEEEEcC
Q psy12825 396 -------YEVIKL--------K-----GYTSWALGLSVASISHTLLNNTNKIHAVSTLIQGH-HGIEEEVFLSLPCVMAD 454 (488)
Q Consensus 396 -------~eIi~~--------k-----g~t~~s~A~a~~~ii~aIl~~~~~v~~vsv~~~G~-ygl~~d~~~svPv~igk 454 (488)
.++.+. + +...| +..++++++||++|++.++.+||.|+|. .|||+|+++++||+|++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~a~~ii~AI~~~~~~~~~vNv~N~G~I~nLP~DavVEVpc~Vd~ 388 (477)
T 3u95_A 311 ERLIKLAEEVQENPHLKITEKHPEIFPKGRLS--GEQHIPFINAIANNKRVRLFLNVENQGALKDFPDDLVMELPVWVDS 388 (477)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHCTTTSCSSCCC--CCSHHHHHHHHHHCCCEEEEEEEECTTSSTTSCTTSEEEEEEEEET
T ss_pred HHHHHHHHHHhhccchhcccccchhccccccc--HHHHHHHHHHHhCCCCeEEEEEeecCcccCCCCCCcEEEEEEEEcC
Confidence 111111 0 11112 2346899999999999999999999998 79999999999999999
Q ss_pred CceEEEeccCCCHHHHHHH
Q psy12825 455 NGVTHIINQNLTPDEAEKL 473 (488)
Q Consensus 455 ~Gv~~i~~l~L~~~E~~~L 473 (488)
+|+.++...+++.....++
T Consensus 389 ~Gi~P~~vg~~p~~~~~l~ 407 (477)
T 3u95_A 389 SGIHREKVEPDLTHRIKIF 407 (477)
T ss_dssp TEEEECCCCSCCCHHHHHH
T ss_pred CCcccccCCCCCHHHHHHH
Confidence 9999987778887766654
No 46
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.29 E-value=1.1e-11 Score=125.76 Aligned_cols=146 Identities=16% Similarity=0.234 Sum_probs=106.9
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcC-------CCC-------CCCcEEEcCCc-
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGA-------PFL-------RSPKIESGSDI- 240 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~-------~~~-------~~~~v~~ttd~- 240 (488)
...||+|||||.||+++|..++..|+ +|+|+|++++.++.....+.+.. ... ...++..++|+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~--~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~ 82 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGF--RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLA 82 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchH
Confidence 34699999999999999999999998 89999999987765433333211 011 12457788898
Q ss_pred cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEE----
Q psy12825 241 AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVI---- 316 (488)
Q Consensus 241 eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rVi---- 316 (488)
+++++||+||+++ .+|+++++++.++|++++|+. .|+.||.+.+...-+...+.. |+|++
T Consensus 83 ~a~~~ad~ViEav--------------~E~l~iK~~lf~~l~~~~~~~-aIlaSNTSsl~is~ia~~~~~-p~r~ig~Hf 146 (319)
T 3ado_A 83 EAVEGVVHIQECV--------------PENLDLKRKIFAQLDSIVDDR-VVLSSSSSCLLPSKLFTGLAH-VKQCIVAHP 146 (319)
T ss_dssp HHTTTEEEEEECC--------------CSCHHHHHHHHHHHHTTCCSS-SEEEECCSSCCHHHHHTTCTT-GGGEEEEEE
T ss_pred hHhccCcEEeecc--------------ccHHHHHHHHHHHHHHHhhhc-ceeehhhhhccchhhhhhccC-CCcEEEecC
Confidence 5799999999996 589999999999999998755 577999998544434333332 35555
Q ss_pred --------------eecCChHHHHHHHHHHHHhCCCC
Q psy12825 317 --------------GSGTNLDSMRFRVLLAQKLGLSP 339 (488)
Q Consensus 317 --------------G~gt~lds~R~~~~lA~~Lgv~p 339 (488)
|-.|..++...-..+++.+|..|
T Consensus 147 fNP~~~m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~p 183 (319)
T 3ado_A 147 VNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSP 183 (319)
T ss_dssp CSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEE
T ss_pred CCCccccchHHhcCCCCCcHHHHHHHHHHHHHhCCcc
Confidence 45567777666777777777554
No 47
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.16 E-value=2e-10 Score=128.35 Aligned_cols=147 Identities=14% Similarity=0.143 Sum_probs=110.5
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcC-----------CCCCCCcEEEcCCcccc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGA-----------PFLRSPKIESGSDIAMS 243 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~-----------~~~~~~~v~~ttd~eal 243 (488)
.+.+||+|||||.||.+||+.++..|+ +|+|+|++++.++.....+.... ......++..+++++++
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~aG~--~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKEL 391 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGG
T ss_pred ccccEEEEEcccHHHHHHHHHHHhCCC--chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHH
Confidence 345799999999999999999999998 99999999987754333222110 11234577888899999
Q ss_pred CCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEE-------
Q psy12825 244 EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVI------- 316 (488)
Q Consensus 244 ~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rVi------- 316 (488)
++||+||+++ .+|+++++++.+++++++++. .|+.||.+.+-...+.+.+.. |+|++
T Consensus 392 ~~aDlVIEAV--------------~E~l~iK~~vf~~le~~~~~~-aIlASNTSsl~i~~ia~~~~~-p~r~ig~HFfnP 455 (742)
T 3zwc_A 392 STVDLVVEAV--------------FEDMNLKKKVFAELSALCKPG-AFLCTNTSALNVDDIASSTDR-PQLVIGTHFFSP 455 (742)
T ss_dssp GSCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTT-CEEEECCSSSCHHHHHTTSSC-GGGEEEEECCSS
T ss_pred hhCCEEEEec--------------cccHHHHHHHHHHHhhcCCCC-ceEEecCCcCChHHHHhhcCC-ccccccccccCC
Confidence 9999999996 589999999999999998655 578999998543333333333 35555
Q ss_pred -----------eecCChHHHHHHHHHHHHhCCCC
Q psy12825 317 -----------GSGTNLDSMRFRVLLAQKLGLSP 339 (488)
Q Consensus 317 -----------G~gt~lds~R~~~~lA~~Lgv~p 339 (488)
|-.|.-++...-..+++.+|..|
T Consensus 456 ~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~p 489 (742)
T 3zwc_A 456 AHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIG 489 (742)
T ss_dssp TTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCC
Confidence 44677777777777888888765
No 48
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.94 E-value=3.7e-09 Score=112.00 Aligned_cols=146 Identities=18% Similarity=0.258 Sum_probs=97.0
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHH-HHhhcC---CCC------CCCcEEEcCCccccC
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEML-DLQHGA---PFL------RSPKIESGSDIAMSE 244 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~-dL~~~~---~~~------~~~~v~~ttd~eal~ 244 (488)
.+.+||+|||+|.||.++|..|+..|+ +|+++|+++++...... .+.... ... ...++..++|+++++
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~--~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~al~ 129 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGI--ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHKLS 129 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGGCT
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC--eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHHHc
Confidence 345799999999999999999999998 99999999884332111 111110 000 124677888999999
Q ss_pred CCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchh-HHHHHHHhcCCCCCcEE-------
Q psy12825 245 GSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDV-LTYISWKLSGFPKNRVI------- 316 (488)
Q Consensus 245 dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi-~t~~~~k~sg~p~~rVi------- 316 (488)
+||+||+++ .++..+++++.++|.+++++. .|++||.+.+ ++.+. +...- +.+++
T Consensus 130 ~aDlVIeAV--------------pe~~~vk~~v~~~l~~~~~~~-aIlasnTSsl~i~~ia-~~~~~-p~r~iG~HffnP 192 (460)
T 3k6j_A 130 NCDLIVESV--------------IEDMKLKKELFANLENICKST-CIFGTNTSSLDLNEIS-SVLRD-PSNLVGIHFFNP 192 (460)
T ss_dssp TCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTT-CEEEECCSSSCHHHHH-TTSSS-GGGEEEEECCSS
T ss_pred cCCEEEEcC--------------CCCHHHHHHHHHHHHhhCCCC-CEEEecCCChhHHHHH-HhccC-CcceEEEEecch
Confidence 999999996 367788899999999987544 2446787653 33332 22211 22333
Q ss_pred -----------eecCChHHHHHHHHHHHHhCCCC
Q psy12825 317 -----------GSGTNLDSMRFRVLLAQKLGLSP 339 (488)
Q Consensus 317 -----------G~gt~lds~R~~~~lA~~Lgv~p 339 (488)
|-.|.-+....-..+.+.+|..|
T Consensus 193 v~~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~ 226 (460)
T 3k6j_A 193 ANVIRLVEIIYGSHTSSQAIATAFQACESIKKLP 226 (460)
T ss_dssp TTTCCEEEEECCSSCCHHHHHHHHHHHHHTTCEE
T ss_pred hhhCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEE
Confidence 33355666655666677777544
No 49
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.90 E-value=3.9e-09 Score=112.71 Aligned_cols=146 Identities=18% Similarity=0.202 Sum_probs=99.4
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcC----CCCC---------CCcEEEcCCccc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGA----PFLR---------SPKIESGSDIAM 242 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~----~~~~---------~~~v~~ttd~ea 242 (488)
+.+||+|||+|.||.++|..|+..|+ +|+++|++++.++.....+.+.. .... ..++..++|+++
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGH--QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHA 81 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHH
Confidence 45799999999999999999999997 89999999998876555443221 1000 125777889999
Q ss_pred cCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEE------
Q psy12825 243 SEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVI------ 316 (488)
Q Consensus 243 l~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rVi------ 316 (488)
+++||+||+++ .++..+++++.+++.+++++. .|++||.+.+-...+.+...- +.+++
T Consensus 82 ~~~aDlVIeAV--------------pe~~~vk~~v~~~l~~~~~~~-~IlasntSti~i~~ia~~~~~-p~~~ig~hf~~ 145 (483)
T 3mog_A 82 LAAADLVIEAA--------------SERLEVKKALFAQLAEVCPPQ-TLLTTNTSSISITAIAAEIKN-PERVAGLHFFN 145 (483)
T ss_dssp GGGCSEEEECC--------------CCCHHHHHHHHHHHHHHSCTT-CEEEECCSSSCHHHHTTTSSS-GGGEEEEEECS
T ss_pred hcCCCEEEEcC--------------CCcHHHHHHHHHHHHHhhccC-cEEEecCCCCCHHHHHHHccC-ccceEEeeecC
Confidence 99999999996 356778888999999887544 245677766432222222211 12222
Q ss_pred ------------eecCChHHHHHHHHHHHHhCCCC
Q psy12825 317 ------------GSGTNLDSMRFRVLLAQKLGLSP 339 (488)
Q Consensus 317 ------------G~gt~lds~R~~~~lA~~Lgv~p 339 (488)
|-.|.-+....-..+++.+|..|
T Consensus 146 Pa~v~~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~ 180 (483)
T 3mog_A 146 PAPVMKLVEVVSGLATAAEVVEQLCELTLSWGKQP 180 (483)
T ss_dssp STTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEE
T ss_pred hhhhCCeEEEecCCCCCHHHHHHHHHHHHHhCCEE
Confidence 33345666666667778887643
No 50
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.87 E-value=3.1e-08 Score=105.11 Aligned_cols=147 Identities=14% Similarity=0.160 Sum_probs=96.0
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhc----------CC-CCCCCcEEEcCCccc
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHG----------AP-FLRSPKIESGSDIAM 242 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~----------~~-~~~~~~v~~ttd~ea 242 (488)
.++.+||+|||+|.||.++|..|+..|+ +|+++|++++.++.....+.+. .. .........++|+++
T Consensus 34 ~~~~~kV~VIGaG~MG~~iA~~la~~G~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 111 (463)
T 1zcj_A 34 AQPVSSVGVLGLGTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE 111 (463)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGG
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHH
Confidence 3456799999999999999999999987 8999999998776543322210 00 001112334678888
Q ss_pred cCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEe-----
Q psy12825 243 SEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIG----- 317 (488)
Q Consensus 243 l~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG----- 317 (488)
+++||+||+++ .++..+++++.+.+..++++.. |+++|.+.+-...+.+.... +.+++|
T Consensus 112 ~~~aDlVIeaV--------------pe~~~~k~~v~~~l~~~~~~~~-ii~snTs~~~~~~la~~~~~-~~~~ig~hf~~ 175 (463)
T 1zcj_A 112 LSTVDLVVEAV--------------FEDMNLKKKVFAELSALCKPGA-FLCTNTSALNVDDIASSTDR-PQLVIGTHFFS 175 (463)
T ss_dssp GTTCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTC-EEEECCSSSCHHHHHTTSSC-GGGEEEEEECS
T ss_pred HCCCCEEEEcC--------------CCCHHHHHHHHHHHHhhCCCCe-EEEeCCCCcCHHHHHHHhcC-CcceEEeecCC
Confidence 99999999996 2466778888888888875442 33568876433333333222 233443
Q ss_pred -------------ecCChHHHHHHHHHHHHhCCC
Q psy12825 318 -------------SGTNLDSMRFRVLLAQKLGLS 338 (488)
Q Consensus 318 -------------~gt~lds~R~~~~lA~~Lgv~ 338 (488)
..|.-+....-..+.+.+|..
T Consensus 176 P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~ 209 (463)
T 1zcj_A 176 PAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKI 209 (463)
T ss_dssp STTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCE
T ss_pred CcccceeEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 245666655556666777653
No 51
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.87 E-value=2.8e-09 Score=107.97 Aligned_cols=108 Identities=16% Similarity=0.258 Sum_probs=78.3
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcC------CCCC--------CCcEEEcCCc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGA------PFLR--------SPKIESGSDI 240 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~------~~~~--------~~~v~~ttd~ 240 (488)
++.+||+|||+|.||.++|..|+..|+ +|+++|++++.++.....+.... .... ..++..++|+
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~ 81 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGF--RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNL 81 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCH
Confidence 456799999999999999999999998 89999999988876544332110 0000 1247778888
Q ss_pred -cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchh
Q psy12825 241 -AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDV 299 (488)
Q Consensus 241 -eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi 299 (488)
+++++||+||+++ .++..+++++...+..++++.. |+++|.+.+
T Consensus 82 ~eav~~aDlVieav--------------pe~~~~k~~v~~~l~~~~~~~~-Ii~s~tS~i 126 (319)
T 2dpo_A 82 AEAVEGVVHIQECV--------------PENLDLKRKIFAQLDSIVDDRV-VLSSSSSCL 126 (319)
T ss_dssp HHHTTTEEEEEECC--------------CSCHHHHHHHHHHHHTTCCSSS-EEEECCSSC
T ss_pred HHHHhcCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCe-EEEEeCCCh
Confidence 4799999999996 3566788889999999875442 445776653
No 52
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.84 E-value=9.6e-09 Score=102.89 Aligned_cols=99 Identities=18% Similarity=0.213 Sum_probs=77.8
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~ 255 (488)
-.+||+|||+|.||.++|..|+ .|+ +|+++|++++.++.....+.+. ...++..++|++++++||+||+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~--~V~v~d~~~~~~~~~~~~l~~~----~~~~i~~~~~~~~~~~aDlVieav-- 81 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKH--EVVLQDVSEKALEAAREQIPEE----LLSKIEFTTTLEKVKDCDIVMEAV-- 81 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTS--EEEEECSCHHHHHHHHHHSCGG----GGGGEEEESSCTTGGGCSEEEECC--
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCC--EEEEEECCHHHHHHHHHHHHHH----HhCCeEEeCCHHHHcCCCEEEEcC--
Confidence 4579999999999999999999 888 9999999998887654442111 123677778887899999999996
Q ss_pred ccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCch
Q psy12825 256 RSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVD 298 (488)
Q Consensus 256 ~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvd 298 (488)
.++..+.+.+..+++.. |++++ ++|.+.
T Consensus 82 ------------pe~~~vk~~l~~~l~~~-~~~Il--asntSt 109 (293)
T 1zej_A 82 ------------FEDLNTKVEVLREVERL-TNAPL--CSNTSV 109 (293)
T ss_dssp ------------CSCHHHHHHHHHHHHTT-CCSCE--EECCSS
T ss_pred ------------cCCHHHHHHHHHHHhcC-CCCEE--EEECCC
Confidence 46777888888889988 88744 567654
No 53
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.84 E-value=1.7e-08 Score=112.80 Aligned_cols=145 Identities=14% Similarity=0.222 Sum_probs=100.1
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhc----CCC---------CCCCcEEEcCCccc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHG----APF---------LRSPKIESGSDIAM 242 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~----~~~---------~~~~~v~~ttd~ea 242 (488)
+.+||+|||+|.||.++|..++..|+ +|+++|++++.++.....+.+. ... ....++..++|+++
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~ 388 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSNY--PVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYES 388 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTTC--CEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGG
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHH
Confidence 45689999999999999999999987 8999999998776533322221 110 01346788889999
Q ss_pred cCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchh-HHHHHHHhcCCCCCcEE-----
Q psy12825 243 SEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDV-LTYISWKLSGFPKNRVI----- 316 (488)
Q Consensus 243 l~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi-~t~~~~k~sg~p~~rVi----- 316 (488)
+++||+||+++ .++..+++++..++.+++++. .|++||.+.+ ++.+. +.... +++++
T Consensus 389 ~~~aDlVIeaV--------------pe~~~vk~~v~~~l~~~~~~~-~IlasntStl~i~~la-~~~~~-p~~~iG~hf~ 451 (725)
T 2wtb_A 389 FRDVDMVIEAV--------------IENISLKQQIFADLEKYCPQH-CILASNTSTIDLNKIG-ERTKS-QDRIVGAHFF 451 (725)
T ss_dssp GTTCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTT-CEEEECCSSSCHHHHT-TTCSC-TTTEEEEEEC
T ss_pred HCCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCHHHHH-HHhcC-CCCEEEecCC
Confidence 99999999996 466778888999999987654 2457888764 33332 22222 12333
Q ss_pred -------------eecCChHHHHHHHHHHHHhCCCC
Q psy12825 317 -------------GSGTNLDSMRFRVLLAQKLGLSP 339 (488)
Q Consensus 317 -------------G~gt~lds~R~~~~lA~~Lgv~p 339 (488)
|-.|..++...-..+.+.+|..|
T Consensus 452 ~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~ 487 (725)
T 2wtb_A 452 SPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTP 487 (725)
T ss_dssp SSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEE
T ss_pred CCcccCceEEEEECCCCCHHHHHHHHHHHHHhCCEE
Confidence 33356666666667777887543
No 54
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=98.83 E-value=4.8e-09 Score=103.96 Aligned_cols=106 Identities=18% Similarity=0.254 Sum_probs=76.8
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC--------CC------CCCcEEEcCCcc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP--------FL------RSPKIESGSDIA 241 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~--------~~------~~~~v~~ttd~e 241 (488)
+.+||+|||+|.||..+|..++..|. +|+++|+++++++.....+.+... .. ...++..++|++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~ 80 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGF--AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLA 80 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHH
Confidence 45799999999999999999999997 999999999988765554322100 00 012355677884
Q ss_pred -ccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCch
Q psy12825 242 -MSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVD 298 (488)
Q Consensus 242 -al~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvd 298 (488)
++++||+||+++ ..+.++.+++.+++..++++.. |+++|.+.
T Consensus 81 ~~~~~aDlVi~av--------------~~~~~~~~~v~~~l~~~~~~~~-il~s~tS~ 123 (283)
T 4e12_A 81 QAVKDADLVIEAV--------------PESLDLKRDIYTKLGELAPAKT-IFATNSST 123 (283)
T ss_dssp HHTTTCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTC-EEEECCSS
T ss_pred HHhccCCEEEEec--------------cCcHHHHHHHHHHHHhhCCCCc-EEEECCCC
Confidence 689999999996 3556678888888888865432 34556544
No 55
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.77 E-value=1.4e-08 Score=101.24 Aligned_cols=106 Identities=20% Similarity=0.322 Sum_probs=75.7
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhc------CCCCC------------CCcEEEc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHG------APFLR------------SPKIESG 237 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~------~~~~~------------~~~v~~t 237 (488)
+++||+|||+|.||.++|..|+..|. +|+++|+++++++.....+.+. ..... ..++..+
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 91 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGH--TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS 91 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe
Confidence 35689999999999999999999987 9999999998876543222110 00000 1246777
Q ss_pred CCcc-ccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCC-CcEEEEEeCCchh
Q psy12825 238 SDIA-MSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSP-DCILLIISNPVDV 299 (488)
Q Consensus 238 td~e-al~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p-~a~vIv~TNPvdi 299 (488)
+|++ ++++||+||+++ ..+..+.+++.+.+..+++ +. |+++|...+
T Consensus 92 ~~~~~~~~~aD~Vi~av--------------p~~~~~~~~v~~~l~~~~~~~~--iv~s~ts~i 139 (302)
T 1f0y_A 92 TDAASVVHSTDLVVEAI--------------VENLKVKNELFKRLDKFAAEHT--IFASNTSSL 139 (302)
T ss_dssp SCHHHHTTSCSEEEECC--------------CSCHHHHHHHHHHHTTTSCTTC--EEEECCSSS
T ss_pred cCHHHhhcCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCe--EEEECCCCC
Confidence 8885 899999999996 3455667788888888765 55 335666543
No 56
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.66 E-value=4.1e-08 Score=109.53 Aligned_cols=147 Identities=17% Similarity=0.220 Sum_probs=97.8
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhc----CCCCC---------CCcEEEcCCc
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHG----APFLR---------SPKIESGSDI 240 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~----~~~~~---------~~~v~~ttd~ 240 (488)
..+.+||+|||+|.||.++|..++..|+ +|+++|++++.++.....+.+. ..... ..+++.++|+
T Consensus 311 ~~~i~kV~VIGaG~MG~~iA~~la~aG~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~ 388 (715)
T 1wdk_A 311 AKDVKQAAVLGAGIMGGGIAYQSASKGT--PILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY 388 (715)
T ss_dssp CCCCSSEEEECCHHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS
T ss_pred cccCCEEEEECCChhhHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH
Confidence 3456789999999999999999999998 8999999998776432222211 10000 1247778889
Q ss_pred cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchh-HHHHHHHhcC----------
Q psy12825 241 AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDV-LTYISWKLSG---------- 309 (488)
Q Consensus 241 eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi-~t~~~~k~sg---------- 309 (488)
+++++||+||+++ .++..+++++...+.+++++. .|++||.+.+ ++.+. +...
T Consensus 389 ~~~~~aDlVIeaV--------------~e~~~vk~~v~~~l~~~~~~~-~IlasntStl~i~~la-~~~~~~~~~ig~hf 452 (715)
T 1wdk_A 389 GDFGNVDLVVEAV--------------VENPKVKQAVLAEVENHVRED-AILASNTSTISISLLA-KALKRPENFVGMHF 452 (715)
T ss_dssp TTGGGCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTT-CEEEECCSSSCHHHHG-GGCSCGGGEEEEEC
T ss_pred HHHCCCCEEEEcC--------------CCCHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHH-HHhcCccceEEEEc
Confidence 8999999999996 366778888999999987544 2457887653 33332 2221
Q ss_pred C-CCCc------EEeecCChHHHHHHHHHHHHhCCC
Q psy12825 310 F-PKNR------VIGSGTNLDSMRFRVLLAQKLGLS 338 (488)
Q Consensus 310 ~-p~~r------ViG~gt~lds~R~~~~lA~~Lgv~ 338 (488)
+ |+.. +.|-.|.-+....-..+.+.+|..
T Consensus 453 ~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~ 488 (715)
T 1wdk_A 453 FNPVHMMPLVEVIRGEKSSDLAVATTVAYAKKMGKN 488 (715)
T ss_dssp CSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCE
T ss_pred cCCcccCceEEEEECCCCCHHHHHHHHHHHHHhCCE
Confidence 1 1111 234445666665566667777754
No 57
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.44 E-value=2.9e-07 Score=98.13 Aligned_cols=122 Identities=17% Similarity=0.105 Sum_probs=80.1
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCC---------CCcEEEcCCc-cccCC
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLR---------SPKIESGSDI-AMSEG 245 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~---------~~~v~~ttd~-eal~d 245 (488)
+++||+|||+|.||..+|..|+..+...+|+++|+++++++.+........ ... ..++..++|+ +++++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~-e~gl~~~~~~~~~~~l~~t~~~~~~~~~ 86 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIY-EPGLDEIVFAARGRNLFFSSDIPKAIAE 86 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSC-CTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcC-CCCHHHHHHHhhcCCEEEECCHHHHhhc
Confidence 457999999999999999999998543489999999988775432110000 000 1247778887 67999
Q ss_pred CcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEE-eCCchh
Q psy12825 246 SRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLII-SNPVDV 299 (488)
Q Consensus 246 ADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~-TNPvdi 299 (488)
||+||++++.|.+.+.++.+ -..++..+.+.++.|.++. |+.+||.. |+|++.
T Consensus 87 aDvvii~Vptp~~~~g~~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt 141 (481)
T 2o3j_A 87 ADLIFISVNTPTKMYGRGKG-MAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKA 141 (481)
T ss_dssp CSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTH
T ss_pred CCEEEEecCCcccccccccc-CCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCH
Confidence 99999998877654322222 1123345566667777764 45544433 677764
No 58
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.38 E-value=1.6e-06 Score=88.86 Aligned_cols=115 Identities=15% Similarity=0.159 Sum_probs=81.6
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcC---CCCCCCcEEEcCCc-cccCCCcEEEE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGA---PFLRSPKIESGSDI-AMSEGSRIVII 251 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~---~~~~~~~v~~ttd~-eal~dADiVIi 251 (488)
.++||+|||+|.+|.+++..|+..|. +|.++|++++.++.+...-.... ......++..++|+ +++++||+||+
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~--~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVil 105 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQ--KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILI 105 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTC--CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEE
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEE
Confidence 45799999999999999999999886 89999999887765443321110 01123457778888 57999999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEeCCch----hHHHHHHHhc
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIISNPVD----VLTYISWKLS 308 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~TNPvd----i~t~~~~k~s 308 (488)
++. ...++++++.+..+. |+.++|.++|-.+ .+.+++.+..
T Consensus 106 aVp----------------~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l 151 (356)
T 3k96_A 106 VVP----------------SFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATEL 151 (356)
T ss_dssp CCC----------------HHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHH
T ss_pred CCC----------------HHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHc
Confidence 962 125677788888874 5777787777544 2345555543
No 59
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.35 E-value=1.4e-06 Score=92.83 Aligned_cols=115 Identities=16% Similarity=0.118 Sum_probs=75.7
Q ss_pred CCCceEEEEecccchHHHHHHHHHc-CCCCeEEEEeCChh----HHHHHHHHHhhcC-CCC----------CCCcEEEcC
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQ-GIYSNFCLIDSNED----RCKGEMLDLQHGA-PFL----------RSPKIESGS 238 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~-~l~~el~L~Di~~e----~l~g~~~dL~~~~-~~~----------~~~~v~~tt 238 (488)
++.+||+|||+|.||..+|..|+.. |.. +|+++|++++ +++.+........ ..+ ...++..++
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~-~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~tt 94 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFE-KVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTP 94 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCC-EEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEES
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCC-eEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeC
Confidence 3567999999999999999999999 753 8999999998 6554322110000 000 035688888
Q ss_pred CccccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEe
Q psy12825 239 DIAMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIIS 294 (488)
Q Consensus 239 d~eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~T 294 (488)
|.+++++||+||++++.+.....++ ..++..+...++.|.++. |..++|+-|
T Consensus 95 d~ea~~~aDvViiaVptp~~~~~~~----~~dl~~v~~~~~~i~~~l~~g~iVV~~S 147 (478)
T 3g79_A 95 DFSRISELDAVTLAIQTPFANPKDL----EPDFSALIDGIRNVGKYLKPGMLVVLES 147 (478)
T ss_dssp CGGGGGGCSEEEECCCCCCCSSCCS----SCCCHHHHHHHHHHHHHCCTTCEEEECS
T ss_pred cHHHHhcCCEEEEecCCchhccCCc----cccHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 8889999999999987765432210 123344555566666653 555554443
No 60
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.31 E-value=1.4e-06 Score=83.02 Aligned_cols=95 Identities=14% Similarity=0.203 Sum_probs=70.4
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEE-EeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCL-IDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L-~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
+++||+|||+|.||..++..|+..+. +|.+ +|+++++++....++.. .. ..++.++++++|+||++..
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~--~V~~v~~r~~~~~~~l~~~~g~--------~~-~~~~~~~~~~aDvVilavp 90 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQI--PAIIANSRGPASLSSVTDRFGA--------SV-KAVELKDALQADVVILAVP 90 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTC--CEEEECTTCGGGGHHHHHHHTT--------TE-EECCHHHHTTSSEEEEESC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEECCCHHHHHHHHHHhCC--------Cc-ccChHHHHhcCCEEEEeCC
Confidence 46799999999999999999998886 7888 99999888765544421 22 2345577899999999962
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCch
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVD 298 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvd 298 (488)
+ ..+.++++.+.. .++.++|.++||..
T Consensus 91 ----~------------~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 91 ----Y------------DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp ----G------------GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred ----h------------HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 1 134455555655 46778888899985
No 61
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.31 E-value=1.5e-06 Score=91.29 Aligned_cols=121 Identities=18% Similarity=0.193 Sum_probs=76.6
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHH--------HhhcCCCCCCCcEEEcCCc-cccCC
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLD--------LQHGAPFLRSPKIESGSDI-AMSEG 245 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~d--------L~~~~~~~~~~~v~~ttd~-eal~d 245 (488)
++.+||+|||+|.||..+|..|+. +. +|+++|+++++++.+... +.+... ....++..++|+ +++++
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~--~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~-~~~~~l~~ttd~~ea~~~ 109 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NH--EVVALDIVQAKVDMLNQKISPIVDKEIQEYLA-EKPLNFRATTDKHDAYRN 109 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TS--EEEEECSCHHHHHHHHTTCCSSCCHHHHHHHH-HSCCCEEEESCHHHHHTT
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CC--eEEEEecCHHHhhHHhccCCccccccHHHHHh-hccCCeEEEcCHHHHHhC
Confidence 456799999999999999998887 65 999999999887754331 111000 002367888897 68999
Q ss_pred CcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEE-eCCchhHHHHH
Q psy12825 246 SRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLII-SNPVDVLTYIS 304 (488)
Q Consensus 246 ADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~-TNPvdi~t~~~ 304 (488)
||+||+++..+..+.... -++..+.+.++.|.+..|..++|+- |.|.+..-.+.
T Consensus 110 aDvViiaVPt~~~~~~~~-----~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~ 164 (432)
T 3pid_A 110 ADYVIIATPTDYDPKTNY-----FNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIK 164 (432)
T ss_dssp CSEEEECCCCEEETTTTE-----EECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHH
T ss_pred CCEEEEeCCCcccccccc-----ccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHH
Confidence 999999975443221111 1223344444444445567766554 46666544443
No 62
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.29 E-value=2.3e-06 Score=90.53 Aligned_cols=112 Identities=19% Similarity=0.230 Sum_probs=77.8
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCC----------CCcEEEcCCcc-ccCCC
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLR----------SPKIESGSDIA-MSEGS 246 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~----------~~~v~~ttd~e-al~dA 246 (488)
|||+|||+|.||..+|..|+..|. +|+++|+++++++.......... .+. ..++..++|++ ++++|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~--~V~~~D~~~~~v~~l~~g~~~i~-e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA--NVRCIDTDRNKIEQLNSGTIPIY-EPGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHTCSCCC-STTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC--EEEEEECCHHHHHHHHcCCCccc-CCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence 799999999999999999999987 99999999988876543211110 000 34577888985 69999
Q ss_pred cEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEe-CCch
Q psy12825 247 RIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIIS-NPVD 298 (488)
Q Consensus 247 DiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~T-NPvd 298 (488)
|+||++++.+..+.. ..++..+.++++.|.++. ++.+||..| -|.+
T Consensus 80 DvViiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pg 127 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDG------SADMSYVLDAARSIGRAMSRYILIVTKSTVPVG 127 (450)
T ss_dssp SEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTT
T ss_pred CEEEEEcCCCcccCC------CcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCc
Confidence 999999877654322 233456666677777664 555555544 3443
No 63
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.27 E-value=2.8e-06 Score=89.19 Aligned_cols=112 Identities=13% Similarity=0.170 Sum_probs=74.7
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCC----------CCcEEEcCCcc-ccCCC
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLR----------SPKIESGSDIA-MSEGS 246 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~----------~~~v~~ttd~e-al~dA 246 (488)
|||+|||+|.||..++..|+..|. +|+++|+++++++.......... .+. ..++..++|++ ++++|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~--~V~~~d~~~~~~~~l~~~~~~i~-e~~l~~~~~~~~~~g~l~~t~~~~~~~~~a 77 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGH--EVIGVDVSSTKIDLINQGKSPIV-EPGLEALLQQGRQTGRLSGTTDFKKAVLDS 77 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC--EEEEECSCHHHHHHHHTTCCSSC-CTTHHHHHHHHHHTTCEEEESCHHHHHHTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHhCCCCCcC-CCCHHHHHHhhcccCceEEeCCHHHHhccC
Confidence 589999999999999999999887 89999999988765432110000 000 23577788884 79999
Q ss_pred cEEEEecccccCC-CcchHhhHhhhHHHHHHHHHHHhcc-CC---CcEEEEE-eCCchh
Q psy12825 247 RIVIITAGVRSLV-GETRLQLVDRNVKIFKDLIPKIAKG-SP---DCILLII-SNPVDV 299 (488)
Q Consensus 247 DiVIitag~~~k~-G~~r~dll~~N~~ii~ei~~~I~~~-~p---~a~vIv~-TNPvdi 299 (488)
|+||+++..+... |. -++..+.+.++.|.++ .| +.++++. |+|.+.
T Consensus 78 DvviiaVptp~~~~~~-------~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~ 129 (436)
T 1mv8_A 78 DVSFICVGTPSKKNGD-------LDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGT 129 (436)
T ss_dssp SEEEECCCCCBCTTSS-------BCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTH
T ss_pred CEEEEEcCCCcccCCC-------cchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCc
Confidence 9999998766432 22 1223344444555544 34 5666555 678765
No 64
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.19 E-value=8e-06 Score=82.03 Aligned_cols=119 Identities=17% Similarity=0.206 Sum_probs=79.1
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC--CCCCCcEEEcCCccccCCCcEEEEec
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP--FLRSPKIESGSDIAMSEGSRIVIITA 253 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~--~~~~~~v~~ttd~eal~dADiVIita 253 (488)
.++||+|||+|.+|..++..|+..|. +|.++ .+++.++....+-..... ......+..++|.+++.++|+||+++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~--~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~vilav 94 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH--EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAVQGADLVLFCV 94 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC--EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGGTTCSEEEECC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC--eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHcCCCCEEEEEc
Confidence 57899999999999999999999886 89999 888777654332111100 00112334566777789999999996
Q ss_pred ccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEe
Q psy12825 254 GVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVDVLTYISWKLSGFPKNRVIG 317 (488)
Q Consensus 254 g~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG 317 (488)
... .++++.+.|..+ .|+.+++.++|..+... .+.+. +| +++++
T Consensus 95 k~~----------------~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~-~l~~~--~~-~~vl~ 139 (318)
T 3hwr_A 95 KST----------------DTQSAALAMKPALAKSALVLSLQNGVENAD-TLRSL--LE-QEVAA 139 (318)
T ss_dssp CGG----------------GHHHHHHHHTTTSCTTCEEEEECSSSSHHH-HHHHH--CC-SEEEE
T ss_pred ccc----------------cHHHHHHHHHHhcCCCCEEEEeCCCCCcHH-HHHHH--cC-CcEEE
Confidence 211 235666777776 56788888999987653 33333 34 55653
No 65
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.19 E-value=3.9e-06 Score=87.30 Aligned_cols=121 Identities=17% Similarity=0.205 Sum_probs=77.3
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC-----C--CCCCcEEEcCCc-cccCCCcEE
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP-----F--LRSPKIESGSDI-AMSEGSRIV 249 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~-----~--~~~~~v~~ttd~-eal~dADiV 249 (488)
|||+|||+|.||..++..|+. +. +|+++|+++++++.......+... + ....++..++|+ +++++||+|
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~--~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvv 77 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QN--EVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELV 77 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TS--EEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CC--EEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEE
Confidence 589999999999999999987 64 899999999877654221110000 0 002356677787 678999999
Q ss_pred EEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEE-EeCCchhHHHHHHH
Q psy12825 250 IITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLI-ISNPVDVLTYISWK 306 (488)
Q Consensus 250 Iitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv-~TNPvdi~t~~~~k 306 (488)
|+++..+...+..+.| +..+.++++.|.+..|+.+||. .|||.+....+...
T Consensus 78 iiavpt~~~~~~~~~d-----l~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~ 130 (402)
T 1dlj_A 78 IIATPTNYNSRINYFD-----TQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQK 130 (402)
T ss_dssp EECCCCCEETTTTEEC-----CHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHH
T ss_pred EEecCCCcccCCCCcc-----HHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHH
Confidence 9998665322221222 1233444444444456676665 68999876655443
No 66
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.18 E-value=3.9e-06 Score=89.36 Aligned_cols=112 Identities=13% Similarity=0.107 Sum_probs=76.1
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCC----------CCcEEEcCCc-cc
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLR----------SPKIESGSDI-AM 242 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~----------~~~v~~ttd~-ea 242 (488)
..-.|||+|||+|.||..+|..|+..|. +|+++|+++++++.+........ .+. ..++..++|+ ++
T Consensus 5 ~~~~~~I~VIG~G~vG~~lA~~la~~G~--~V~~~d~~~~~v~~l~~~~~~i~-e~gl~~~l~~~~~~~~l~~ttd~~~a 81 (478)
T 2y0c_A 5 HHGSMNLTIIGSGSVGLVTGACLADIGH--DVFCLDVDQAKIDILNNGGVPIH-EPGLKEVIARNRSAGRLRFSTDIEAA 81 (478)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHTTCCSSC-CTTHHHHHHHHHHTTCEEEECCHHHH
T ss_pred cCCCceEEEECcCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHCCCCCcC-CCCHHHHHHHhcccCCEEEECCHHHH
Confidence 3457899999999999999999999987 89999999987775433211110 001 2357888898 57
Q ss_pred cCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEe
Q psy12825 243 SEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIIS 294 (488)
Q Consensus 243 l~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~T 294 (488)
+++||+||+++..|.+... .-++..+.++++.|.++. |+.+|++.|
T Consensus 82 ~~~aDvviiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 82 VAHGDVQFIAVGTPPDEDG------SADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp HHHCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred hhcCCEEEEEeCCCcccCC------CccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 9999999999877653221 123345666666776664 455554443
No 67
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=98.16 E-value=2.9e-06 Score=82.11 Aligned_cols=104 Identities=18% Similarity=0.266 Sum_probs=64.7
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhH--HHHH--------HHHHhhcCCCCCCCcEEEcCCccc
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDR--CKGE--------MLDLQHGAPFLRSPKIESGSDIAM 242 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~--l~g~--------~~dL~~~~~~~~~~~v~~ttd~ea 242 (488)
.....+||+|||+|.||.+++..|+..+. +|+++|+++++ .+.. ..++.... ..+..++..++
T Consensus 15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~e~ 87 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGRTMAGALADLGH--EVTIGTRDPKATLARAEPDAMGAPPFSQWLPEH-----PHVHLAAFADV 87 (245)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHTCC-------CCHHHHGGGS-----TTCEEEEHHHH
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCC--EEEEEeCChhhhhhhhhhhhhcchhhhHHHhhc-----CceeccCHHHH
Confidence 45567899999999999999999999887 89999999875 1100 12222111 12222223367
Q ss_pred cCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCch
Q psy12825 243 SEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVD 298 (488)
Q Consensus 243 l~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvd 298 (488)
+++||+||++.... ...+.+.++. ....++.++|.++||.+
T Consensus 88 ~~~aDvVilavp~~------------~~~~~~~~i~---~~~l~g~ivi~~s~~~~ 128 (245)
T 3dtt_A 88 AAGAELVVNATEGA------------SSIAALTAAG---AENLAGKILVDIANPLD 128 (245)
T ss_dssp HHHCSEEEECSCGG------------GHHHHHHHHC---HHHHTTSEEEECCCCEE
T ss_pred HhcCCEEEEccCcH------------HHHHHHHHhh---hhhcCCCEEEECCCCCC
Confidence 89999999996211 1122333331 11226788999999874
No 68
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=98.14 E-value=7.1e-06 Score=86.48 Aligned_cols=119 Identities=15% Similarity=0.124 Sum_probs=80.5
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC---------CCCCCcEEEcCCc-cccC
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP---------FLRSPKIESGSDI-AMSE 244 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~---------~~~~~~v~~ttd~-eal~ 244 (488)
.++.+|+|||.|.||..+|..|+..|+ +|+-+|+|+++.+.+.....+... .....++.+++|+ ++++
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~--~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~ 96 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGH--RVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVA 96 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTC--EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCC--cEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHh
Confidence 356799999999999999999999998 999999999887754321111100 0024578888887 5799
Q ss_pred CCcEEEEecccccCCC-cchHhhHhhhHHHHHHHHHHHhccCCCcEEEEE-eCCch
Q psy12825 245 GSRIVIITAGVRSLVG-ETRLQLVDRNVKIFKDLIPKIAKGSPDCILLII-SNPVD 298 (488)
Q Consensus 245 dADiVIitag~~~k~G-~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~-TNPvd 298 (488)
+||++|++++.|..+. ...+..+ ....+.+++.++...+..+||+= |-|+.
T Consensus 97 ~ad~~~I~VpTP~~~d~~~Dl~~v---~~a~~~I~~~l~~~~~g~lVV~eSTVppG 149 (444)
T 3vtf_A 97 ATDATFIAVGTPPAPDGSADLRYV---EAAARAVGRGIRAKGRWHLVVVKSTVPPG 149 (444)
T ss_dssp TSSEEEECCCCCBCTTSSBCCHHH---HHHHHHHHHHHHHHCSCCEEEECSCCCTT
T ss_pred cCCceEEEecCCCCCCCCCCcHHH---HHHHHHHHHHHhhcCCCeEEEEeCCCCCc
Confidence 9999999998886543 2222222 23456666666655555544443 45655
No 69
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.12 E-value=5.5e-06 Score=81.95 Aligned_cols=98 Identities=11% Similarity=0.193 Sum_probs=67.8
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCC-CCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEe
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGI-YSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIIT 252 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l-~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIit 252 (488)
|+.+||+|||+|.||.+++..|+..++ ..+|.++|+++++++.....+ .+..++|. +++++||+||++
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~----------gi~~~~~~~~~~~~aDvVila 70 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC----------GVHTTQDNRQGALNADVVVLA 70 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT----------CCEEESCHHHHHSSCSEEEEC
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc----------CCEEeCChHHHHhcCCeEEEE
Confidence 346899999999999999999999885 458999999998776543221 12344554 678999999999
Q ss_pred cccccCCCcchHhhHhhhHHHHHHHHHHHhcc--CCCcEEEEEeCCch
Q psy12825 253 AGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG--SPDCILLIISNPVD 298 (488)
Q Consensus 253 ag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~--~p~a~vIv~TNPvd 298 (488)
+ +| ..+.++.+.|..+ .++.++|.+++...
T Consensus 71 v----~p------------~~~~~vl~~l~~~~l~~~~iiiS~~agi~ 102 (280)
T 3tri_A 71 V----KP------------HQIKMVCEELKDILSETKILVISLAVGVT 102 (280)
T ss_dssp S----CG------------GGHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred e----CH------------HHHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence 7 21 1344555556554 35556665555554
No 70
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.10 E-value=1.1e-05 Score=79.62 Aligned_cols=105 Identities=16% Similarity=0.127 Sum_probs=67.8
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCC--CCcEEEcCC--c-cccCCCcEEEE
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLR--SPKIESGSD--I-AMSEGSRIVII 251 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~--~~~v~~ttd--~-eal~dADiVIi 251 (488)
++||+|||+|.||..++..|+..|. +|.++|+++++++.....-........ ..++..+++ . ++++++|+||+
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGN--DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCC--cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence 5799999999999999999998886 899999998877654332101000000 001111222 2 23459999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCchh
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVDV 299 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvdi 299 (488)
+... ....++.+.+..+ .|+.+++.++|..+.
T Consensus 81 ~v~~----------------~~~~~v~~~l~~~l~~~~~iv~~~~g~~~ 113 (316)
T 2ew2_A 81 LTKA----------------QQLDAMFKAIQPMITEKTYVLCLLNGLGH 113 (316)
T ss_dssp CSCH----------------HHHHHHHHHHGGGCCTTCEEEECCSSSCT
T ss_pred Eecc----------------ccHHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence 9621 1246666777776 467778888887764
No 71
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=98.08 E-value=1.6e-05 Score=78.79 Aligned_cols=65 Identities=17% Similarity=0.309 Sum_probs=51.7
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
+++||+|||+|.||..++..|+..+. +|+++|+++++++... +. .+..++++ +++++||+||++.
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~--~V~~~d~~~~~~~~~~----~~-------g~~~~~~~~~~~~~aDvvi~~v 67 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGY--LLNVFDLVQSAVDGLV----AA-------GASAARSARDAVQGADVVISML 67 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTC--EEEEECSSHHHHHHHH----HT-------TCEECSSHHHHHTTCSEEEECC
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCC--eEEEEcCCHHHHHHHH----HC-------CCeEcCCHHHHHhCCCeEEEEC
Confidence 35799999999999999999999987 8999999988776432 11 12345566 5689999999996
No 72
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=98.06 E-value=3.5e-05 Score=75.75 Aligned_cols=98 Identities=15% Similarity=0.204 Sum_probs=66.8
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
|+++||+|||+|.||..++..|...+...+|.++|+++++++... +. . ... ..++++ +.+++||+||+++
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-~~--g----~~~--~~~~~~~~~~~~aDvVilav 74 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIAL-ER--G----IVD--EATADFKVFAALADVIILAV 74 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHH-HT--T----SCS--EEESCTTTTGGGCSEEEECS
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHH-Hc--C----Ccc--cccCCHHHhhcCCCEEEEcC
Confidence 456899999999999999999988754458999999988765421 11 1 011 234566 4688999999996
Q ss_pred ccccCCCcchHhhHhhhHHHHHHHHHHHhcc--CCCcEEEEEeCCc
Q psy12825 254 GVRSLVGETRLQLVDRNVKIFKDLIPKIAKG--SPDCILLIISNPV 297 (488)
Q Consensus 254 g~~~k~G~~r~dll~~N~~ii~ei~~~I~~~--~p~a~vIv~TNPv 297 (488)
.. ....++.+.+..+ .|+.+++.++|..
T Consensus 75 p~----------------~~~~~v~~~l~~~~l~~~~ivi~~~~~~ 104 (290)
T 3b1f_A 75 PI----------------KKTIDFIKILADLDLKEDVIITDAGSTK 104 (290)
T ss_dssp CH----------------HHHHHHHHHHHTSCCCTTCEEECCCSCH
T ss_pred CH----------------HHHHHHHHHHHhcCCCCCCEEEECCCCc
Confidence 21 1235566666665 4667666666643
No 73
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.05 E-value=6.1e-06 Score=87.16 Aligned_cols=116 Identities=16% Similarity=0.210 Sum_probs=78.7
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCC----------CCCcEEEcCCc-ccc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL----------RSPKIESGSDI-AMS 243 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~----------~~~~v~~ttd~-eal 243 (488)
.-..+|+|||+|.||..+|..|+..|. +|++||+++++++.+........ .+ ...++..++|+ +++
T Consensus 6 ~~~~~~~vIGlG~vG~~~A~~La~~G~--~V~~~D~~~~kv~~l~~g~~~~~-epgl~~~~~~~~~~g~l~~ttd~~ea~ 82 (446)
T 4a7p_A 6 HGSVRIAMIGTGYVGLVSGACFSDFGH--EVVCVDKDARKIELLHQNVMPIY-EPGLDALVASNVKAGRLSFTTDLAEGV 82 (446)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCSTTHHHHTTTCCSSC-CTTHHHHHHHHHHTTCEEEESCHHHHH
T ss_pred CCceEEEEEcCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHhcCCCCcc-CCCHHHHHHhhcccCCEEEECCHHHHH
Confidence 345799999999999999999999997 99999999988775433211100 00 02467888998 689
Q ss_pred CCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEe-CCch
Q psy12825 244 EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIIS-NPVD 298 (488)
Q Consensus 244 ~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~T-NPvd 298 (488)
++||+||++++.|...+.. .-++..+++.++.|.++. +..++|..| -|.+
T Consensus 83 ~~aDvvii~Vptp~~~~~~-----~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pg 134 (446)
T 4a7p_A 83 KDADAVFIAVGTPSRRGDG-----HADLSYVFAAAREIAENLTKPSVIVTKSTVPVG 134 (446)
T ss_dssp TTCSEEEECCCCCBCTTTC-----CBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTT
T ss_pred hcCCEEEEEcCCCCccccC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCCCch
Confidence 9999999998777542111 123345666666776653 556555554 3443
No 74
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.04 E-value=9.7e-06 Score=81.99 Aligned_cols=107 Identities=13% Similarity=0.137 Sum_probs=71.5
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCC-----CCeEEEEeCChh-----HHHHHHHHHhhcCCC---CCCCcEEEcCCc-
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGI-----YSNFCLIDSNED-----RCKGEMLDLQHGAPF---LRSPKIESGSDI- 240 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l-----~~el~L~Di~~e-----~l~g~~~dL~~~~~~---~~~~~v~~ttd~- 240 (488)
|.++||+|||+|.||..++..|+..+. ..+|.++|++++ .++.....-...... .....+..++|+
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVV 85 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHH
Confidence 445799999999999999999998771 138999999887 665433221111000 012346667777
Q ss_pred cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEeCCc
Q psy12825 241 AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIISNPV 297 (488)
Q Consensus 241 eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~TNPv 297 (488)
+++++||+||+++.. ..+.++.+.|..+. |+.+++..+|-.
T Consensus 86 ~~~~~aD~Vilav~~----------------~~~~~v~~~i~~~l~~~~ivv~~~~Gi 127 (354)
T 1x0v_A 86 QAAEDADILIFVVPH----------------QFIGKICDQLKGHLKANATGISLIKGV 127 (354)
T ss_dssp HHHTTCSEEEECCCG----------------GGHHHHHHHHTTCSCTTCEEEECCCCB
T ss_pred HHHcCCCEEEEeCCH----------------HHHHHHHHHHHhhCCCCCEEEEECCcc
Confidence 568999999999621 13456667777764 677788888744
No 75
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.01 E-value=2.1e-05 Score=76.32 Aligned_cols=93 Identities=15% Similarity=0.364 Sum_probs=66.8
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCe-EEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSN-FCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~e-l~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
+++||+|||+|.||..++..|...+. + +.++|+++++++.....+ .+..++++ +.++++|+||++.
T Consensus 9 ~~m~i~iiG~G~mG~~~a~~l~~~g~--~~v~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~Dvvi~av 76 (266)
T 3d1l_A 9 EDTPIVLIGAGNLATNLAKALYRKGF--RIVQVYSRTEESARELAQKV----------EAEYTTDLAEVNPYAKLYIVSL 76 (266)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHHTC--CEEEEECSSHHHHHHHHHHT----------TCEEESCGGGSCSCCSEEEECC
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC--eEEEEEeCCHHHHHHHHHHc----------CCceeCCHHHHhcCCCEEEEec
Confidence 35799999999999999999988875 5 899999988776543322 12234566 5678999999996
Q ss_pred ccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEeCC
Q psy12825 254 GVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIISNP 296 (488)
Q Consensus 254 g~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~TNP 296 (488)
. .+ ...++++.+.... |+.+++..++-
T Consensus 77 ~--------------~~--~~~~v~~~l~~~~~~~~ivv~~s~~ 104 (266)
T 3d1l_A 77 K--------------DS--AFAELLQGIVEGKREEALMVHTAGS 104 (266)
T ss_dssp C--------------HH--HHHHHHHHHHTTCCTTCEEEECCTT
T ss_pred C--------------HH--HHHHHHHHHHhhcCCCcEEEECCCC
Confidence 2 11 2356666776664 67777777763
No 76
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.01 E-value=3.9e-06 Score=84.81 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=69.3
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHH-HhhcCC-CCCCCcEEEcCCccccCCCcEEEEec
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLD-LQHGAP-FLRSPKIESGSDIAMSEGSRIVIITA 253 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~d-L~~~~~-~~~~~~v~~ttd~eal~dADiVIita 253 (488)
+.+||+|||+|.||..++..|+..+. +|.++|++ +.++..... +.-... .....++..++|++++.++|+||+++
T Consensus 2 ~~mkI~IiGaG~~G~~~a~~L~~~g~--~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vilav 78 (335)
T 3ghy_A 2 SLTRICIVGAGAVGGYLGARLALAGE--AINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAALGEQDVVIVAV 78 (335)
T ss_dssp CCCCEEEESCCHHHHHHHHHHHHTTC--CEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHHHCCCSEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC--EEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHHcCCCCEEEEeC
Confidence 46899999999999999999999886 89999985 444322110 000000 00011234456777789999999996
Q ss_pred ccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCc
Q psy12825 254 GVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPV 297 (488)
Q Consensus 254 g~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPv 297 (488)
. ...+.++.+.|..+ .|+.+|+.+.|..
T Consensus 79 k----------------~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 79 K----------------APALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp C----------------HHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred C----------------chhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 2 12345667777776 5788888889985
No 77
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.01 E-value=2.3e-05 Score=74.01 Aligned_cols=78 Identities=22% Similarity=0.292 Sum_probs=57.2
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
...+||+|||+|.||..++..|+..+. +|.++|++++ ++++||+||++..
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~g~--~V~~~~~~~~----------------------------~~~~aD~vi~av~ 66 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIAGH--EVTYYGSKDQ----------------------------ATTLGEIVIMAVP 66 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTC--EEEEECTTCC----------------------------CSSCCSEEEECSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCHH----------------------------HhccCCEEEEcCC
Confidence 457899999999999999999998886 8999998765 4679999999962
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCch
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVD 298 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvd 298 (488)
...++++.+.+..+.++.+++.++|+.+
T Consensus 67 ----------------~~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 67 ----------------YPALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp ----------------HHHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred ----------------cHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 1123444444544333778888899654
No 78
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.00 E-value=1.8e-05 Score=83.92 Aligned_cols=120 Identities=18% Similarity=0.153 Sum_probs=76.6
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHH-----------HhhcCCCCCCCcEEEcCCc-ccc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLD-----------LQHGAPFLRSPKIESGSDI-AMS 243 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~d-----------L~~~~~~~~~~~v~~ttd~-eal 243 (488)
+++||+|||+|.||..++..|+..+...+|+++|+++++++..... +.... ....+..++|+ +++
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~---~~~~~~~t~~~~e~~ 80 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESC---RGKNLFFSTNIDDAI 80 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHH---BTTTEEEESCHHHHH
T ss_pred CccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHh---hcCCEEEECCHHHHH
Confidence 3579999999999999999999884333899999999877653211 10000 01246677887 578
Q ss_pred CCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEE-eCCchh
Q psy12825 244 EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLII-SNPVDV 299 (488)
Q Consensus 244 ~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~-TNPvdi 299 (488)
++||+||+++..|........+ -..++..+.+.++.|.++ .|+.++|+. |+|...
T Consensus 81 ~~aDvViiaVptp~~~~~v~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~ 137 (467)
T 2q3e_A 81 KEADLVFISVNTPTKTYGMGKG-RAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRA 137 (467)
T ss_dssp HHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTH
T ss_pred hcCCEEEEEcCCchhhcccccc-CCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchH
Confidence 9999999998665432110000 012344566667777665 455555554 567654
No 79
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.98 E-value=1.9e-05 Score=81.00 Aligned_cols=105 Identities=11% Similarity=0.131 Sum_probs=71.9
Q ss_pred CceEEEEecccchHHHHHHHHHcC-----CCCeEEEEeCChh-----HHHHHHHHHhhcCCC---CCCCcEEEcCCc-cc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQG-----IYSNFCLIDSNED-----RCKGEMLDLQHGAPF---LRSPKIESGSDI-AM 242 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~-----l~~el~L~Di~~e-----~l~g~~~dL~~~~~~---~~~~~v~~ttd~-ea 242 (488)
++||+|||+|.||..++..|+..| +..+|.++|++++ +++.+...-...... .....+..++|+ ++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 368999999999999999998877 1138999999887 555433221111000 012356777787 56
Q ss_pred cCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhc----c-CCCcEEEEEeCCc
Q psy12825 243 SEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAK----G-SPDCILLIISNPV 297 (488)
Q Consensus 243 l~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~----~-~p~a~vIv~TNPv 297 (488)
+++||+||+++. ...+.++++.|.. + .|+.++|..+|..
T Consensus 101 ~~~aDvVilav~----------------~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 101 INDADLLIFIVP----------------CQYLESVLASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp HTTCSEEEECCC----------------HHHHHHHHHHHTC---CCCCTTCEEEECCCSC
T ss_pred HcCCCEEEEcCC----------------HHHHHHHHHHHhhhhhccCCCCCEEEEeCCcc
Confidence 899999999962 1356777778876 5 4677788777753
No 80
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.97 E-value=1.6e-05 Score=80.09 Aligned_cols=105 Identities=12% Similarity=0.185 Sum_probs=68.9
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCC-CCcEEEcCCccccCCCcEEEE
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLR-SPKIESGSDIAMSEGSRIVII 251 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~-~~~v~~ttd~eal~dADiVIi 251 (488)
+..-++||+|||+|.||..++..|+..|. +|.++|+++++++.+..+-... ..+. ...+..++++++++++|+||+
T Consensus 10 ~~~~~~kI~iIG~G~mG~ala~~L~~~G~--~V~~~~r~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~~~~aDvVil 86 (335)
T 1z82_A 10 HHHMEMRFFVLGAGSWGTVFAQMLHENGE--EVILWARRKEIVDLINVSHTSP-YVEESKITVRATNDLEEIKKEDILVI 86 (335)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHHSCBT-TBTTCCCCSEEESCGGGCCTTEEEEE
T ss_pred ccccCCcEEEECcCHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCCcc-cCCCCeeeEEEeCCHHHhcCCCEEEE
Confidence 33456899999999999999999999886 8999999988776543331110 0000 003455667755889999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCch
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVD 298 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvd 298 (488)
+... ..+.+++..+.. ++.++|.++|..+
T Consensus 87 ~vk~----------------~~~~~v~~~l~~--~~~~vv~~~nGi~ 115 (335)
T 1z82_A 87 AIPV----------------QYIREHLLRLPV--KPSMVLNLSKGIE 115 (335)
T ss_dssp CSCG----------------GGHHHHHTTCSS--CCSEEEECCCCCC
T ss_pred ECCH----------------HHHHHHHHHhCc--CCCEEEEEeCCCC
Confidence 9621 123444444444 6778888888643
No 81
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=97.93 E-value=3.8e-05 Score=77.13 Aligned_cols=66 Identities=17% Similarity=0.225 Sum_probs=52.5
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
.+.+||+|||+|.||..++..|+..|. +|+++|+++++++.. .+. .+..++++ +++++||+||++.
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~--~V~~~dr~~~~~~~l----~~~-------g~~~~~~~~e~~~~aDvVi~~v 95 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGY--ALQVWNRTPARAASL----AAL-------GATIHEQARAAARDADIVVSML 95 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTC--EEEEECSCHHHHHHH----HTT-------TCEEESSHHHHHTTCSEEEECC
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCC--eEEEEcCCHHHHHHH----HHC-------CCEeeCCHHHHHhcCCEEEEEC
Confidence 356799999999999999999999887 899999999876543 221 13345666 5689999999996
No 82
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.91 E-value=2.1e-05 Score=77.51 Aligned_cols=63 Identities=14% Similarity=0.233 Sum_probs=51.0
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
+||+|||+|.||..++..|+..|. +|+++|+++++++.... . .+..++++ +++++||+||++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~--~V~~~dr~~~~~~~~~~----~-------g~~~~~~~~~~~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC--SVTIWNRSPEKAEELAA----L-------GAERAATPCEVVESCPVTFAML 65 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSGGGGHHHHH----T-------TCEECSSHHHHHHHCSEEEECC
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC--eEEEEcCCHHHHHHHHH----C-------CCeecCCHHHHHhcCCEEEEEc
Confidence 799999999999999999999986 89999999987764321 1 23445666 5688999999996
No 83
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=97.90 E-value=1.4e-05 Score=81.47 Aligned_cols=105 Identities=15% Similarity=0.230 Sum_probs=68.7
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCC---CCCCcEEEcCCc-cccCCCcEEEE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF---LRSPKIESGSDI-AMSEGSRIVII 251 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~---~~~~~v~~ttd~-eal~dADiVIi 251 (488)
+++||+|||+|.||..++..|+..|. +|.++|+++++++............ .....+..++|+ +++++||+||+
T Consensus 14 ~M~kI~iIG~G~mG~~la~~L~~~G~--~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVil 91 (366)
T 1evy_A 14 YLNKAVVFGSGAFGTALAMVLSKKCR--EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILF 91 (366)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTTEE--EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEE
T ss_pred ccCeEEEECCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEE
Confidence 33499999999999999999988776 8999999988776543332111100 012246666777 46899999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHH----Hhcc-CC-CcEEEEEeCCch
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPK----IAKG-SP-DCILLIISNPVD 298 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~----I~~~-~p-~a~vIv~TNPvd 298 (488)
+... ..+.+++.. |..+ .| +.++|.++|..+
T Consensus 92 av~~----------------~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~ 128 (366)
T 1evy_A 92 VIPT----------------QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIE 128 (366)
T ss_dssp CCCH----------------HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCC
T ss_pred CCCh----------------HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCC
Confidence 9621 123344444 4433 34 667777887543
No 84
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=97.89 E-value=2.7e-05 Score=76.65 Aligned_cols=64 Identities=14% Similarity=0.219 Sum_probs=51.0
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
++||+|||+|.||..++..|+..|. +|+++|+++++++..... .+..++++ +.+++||+||++.
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~--~V~~~dr~~~~~~~~~~~-----------g~~~~~~~~~~~~~advvi~~v 65 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGF--DVTVWNRNPAKCAPLVAL-----------GARQASSPAEVCAACDITIAML 65 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTC--CEEEECSSGGGGHHHHHH-----------TCEECSCHHHHHHHCSEEEECC
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCC--eEEEEcCCHHHHHHHHHC-----------CCeecCCHHHHHHcCCEEEEEc
Confidence 4689999999999999999999886 899999999877653321 12345566 5678999999996
No 85
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.89 E-value=3.5e-05 Score=82.08 Aligned_cols=102 Identities=15% Similarity=0.193 Sum_probs=70.1
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc-ccCC---CcE
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA-MSEG---SRI 248 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e-al~d---ADi 248 (488)
+.++++||+|||+|.||..++..|+..|. +|.++|+++++++....... ...+..+++++ .+++ +|+
T Consensus 11 ~~~~~~~IgvIGlG~MG~~lA~~La~~G~--~V~v~~r~~~~~~~l~~~~~-------~~gi~~~~s~~e~v~~l~~aDv 81 (480)
T 2zyd_A 11 HHMSKQQIGVVGMAVMGRNLALNIESRGY--TVSIFNRSREKTEEVIAENP-------GKKLVPYYTVKEFVESLETPRR 81 (480)
T ss_dssp ----CBSEEEECCSHHHHHHHHHHHTTTC--CEEEECSSHHHHHHHHHHST-------TSCEEECSSHHHHHHTBCSSCE
T ss_pred cccCCCeEEEEccHHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHhhCC-------CCCeEEeCCHHHHHhCCCCCCE
Confidence 66788999999999999999999999887 89999999987765433221 12355666763 3444 999
Q ss_pred EEEecccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCch
Q psy12825 249 VIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVD 298 (488)
Q Consensus 249 VIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvd 298 (488)
||+++. ++. .++++.+.+..+ .|+.+||..+|-..
T Consensus 82 Vil~Vp----~~~-----------~v~~vl~~l~~~l~~g~iIId~s~g~~ 117 (480)
T 2zyd_A 82 ILLMVK----AGA-----------GTDAAIDSLKPYLDKGDIIIDGGNTFF 117 (480)
T ss_dssp EEECSC----SSS-----------HHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred EEEECC----CHH-----------HHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 999972 211 234445566665 46778888888764
No 86
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.88 E-value=6.1e-05 Score=75.68 Aligned_cols=98 Identities=12% Similarity=0.167 Sum_probs=67.0
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCC--CeEEEEeCChh--HHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcE
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIY--SNFCLIDSNED--RCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRI 248 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~--~el~L~Di~~e--~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADi 248 (488)
.++++||+|||+|.||..++..|+..|.. .+|.++|++++ +++... .. .+..+++. +++++||+
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~----~~-------G~~~~~~~~e~~~~aDv 87 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALR----KM-------GVKLTPHNKETVQHSDV 87 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHH----HH-------TCEEESCHHHHHHHCSE
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHH----Hc-------CCEEeCChHHHhccCCE
Confidence 34567999999999999999999988831 38999999875 554432 11 12234454 56889999
Q ss_pred EEEecccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCch
Q psy12825 249 VIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVD 298 (488)
Q Consensus 249 VIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvd 298 (488)
||+++. + ..+.++...+..+ .|+.++|.++|...
T Consensus 88 Vilav~----~------------~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 88 LFLAVK----P------------HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp EEECSC----G------------GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred EEEEeC----H------------HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 999972 1 1345555666665 46777888888765
No 87
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.87 E-value=1.2e-05 Score=77.66 Aligned_cols=92 Identities=16% Similarity=0.244 Sum_probs=67.1
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCC--CeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIY--SNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVII 251 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~--~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIi 251 (488)
|+++||+|||+|.||..++..|+..+.. .+|.++|+++++ . .+..++++ +.+++||+||+
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~---------~--------g~~~~~~~~~~~~~~D~vi~ 64 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN---------T--------TLNYMSSNEELARHCDIIVC 64 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS---------S--------SSEECSCHHHHHHHCSEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc---------C--------ceEEeCCHHHHHhcCCEEEE
Confidence 3467999999999999999999888731 389999998765 1 12234565 56789999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchh
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDV 299 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi 299 (488)
++. +. .+.++.+.+..+.++..++..+|..+.
T Consensus 65 ~v~----~~------------~~~~v~~~l~~~l~~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 65 AVK----PD------------IAGSVLNNIKPYLSSKLLISICGGLNI 96 (262)
T ss_dssp CSC----TT------------THHHHHHHSGGGCTTCEEEECCSSCCH
T ss_pred EeC----HH------------HHHHHHHHHHHhcCCCEEEEECCCCCH
Confidence 962 11 245556667666677778888888764
No 88
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.85 E-value=8.9e-05 Score=71.58 Aligned_cols=92 Identities=12% Similarity=0.277 Sum_probs=63.2
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEecccc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAGVR 256 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag~~ 256 (488)
|||+|||+|.||..++..|+..+. .+|.++|+++++++.....+ .+..+.++ +.+ ++|+||++..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~-~~v~~~~r~~~~~~~~~~~~----------g~~~~~~~~~~~-~~D~vi~~v~-- 66 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGG-YRIYIANRGAEKRERLEKEL----------GVETSATLPELH-SDDVLILAVK-- 66 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS-CEEEEECSSHHHHHHHHHHT----------CCEEESSCCCCC-TTSEEEECSC--
T ss_pred CEEEEECchHHHHHHHHHHHHCCC-CeEEEECCCHHHHHHHHHhc----------CCEEeCCHHHHh-cCCEEEEEeC--
Confidence 589999999999999999988873 38999999988776543221 12234455 567 9999999962
Q ss_pred cCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchh
Q psy12825 257 SLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDV 299 (488)
Q Consensus 257 ~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi 299 (488)
...+.++.+.+.. . +.+++.++|....
T Consensus 67 --------------~~~~~~v~~~l~~-~-~~ivv~~~~g~~~ 93 (263)
T 1yqg_A 67 --------------PQDMEAACKNIRT-N-GALVLSVAAGLSV 93 (263)
T ss_dssp --------------HHHHHHHHTTCCC-T-TCEEEECCTTCCH
T ss_pred --------------chhHHHHHHHhcc-C-CCEEEEecCCCCH
Confidence 1233445555544 3 6666666676654
No 89
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.85 E-value=3.5e-05 Score=76.96 Aligned_cols=68 Identities=13% Similarity=0.217 Sum_probs=53.3
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEE
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVII 251 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIi 251 (488)
...+++||+|||+|.||..++..|+..|. +|+++|+++++++... +. .+..++++ +++++||+||+
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~G~--~V~~~dr~~~~~~~l~----~~-------g~~~~~~~~~~~~~aDvvi~ 83 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKNGF--KVTVWNRTLSKCDELV----EH-------GASVCESPAEVIKKCKYTIA 83 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSGGGGHHHH----HT-------TCEECSSHHHHHHHCSEEEE
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHH----HC-------CCeEcCCHHHHHHhCCEEEE
Confidence 34457899999999999999999999987 8999999998776532 11 12345566 56889999999
Q ss_pred ec
Q psy12825 252 TA 253 (488)
Q Consensus 252 ta 253 (488)
+.
T Consensus 84 ~v 85 (310)
T 3doj_A 84 ML 85 (310)
T ss_dssp CC
T ss_pred Ec
Confidence 96
No 90
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.85 E-value=8.6e-05 Score=73.77 Aligned_cols=66 Identities=20% Similarity=0.316 Sum_probs=50.8
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
+.+||+|||+|.||..++..|+..|. +|+++|+++++++... ..- .. ..++++ +++++||+||++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~--~V~~~dr~~~~~~~~~----~~g-----~~-~~~~~~~e~~~~aDvvi~~v 72 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGL--STWGADLNPQACANLL----AEG-----AC-GAAASAREFAGVVDALVILV 72 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHH----HTT-----CS-EEESSSTTTTTTCSEEEECC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHH----HcC-----Cc-cccCCHHHHHhcCCEEEEEC
Confidence 35799999999999999999999987 8999999998776432 211 11 124455 5689999999996
No 91
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.83 E-value=6.1e-05 Score=74.75 Aligned_cols=90 Identities=13% Similarity=0.192 Sum_probs=63.2
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc-ccCCCcEEEEeccc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA-MSEGSRIVIITAGV 255 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e-al~dADiVIitag~ 255 (488)
.+||+|||+|.||..++..|+..|. +|+++|+++++++... +. .+..+++++ .++ ||+||++...
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~--~V~~~dr~~~~~~~~~----~~-------g~~~~~~~~~~~~-aDvvi~~vp~ 80 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG--GVTVYDIRIEAMTPLA----EA-------GATLADSVADVAA-ADLIHITVLD 80 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT--CEEEECSSTTTSHHHH----HT-------TCEECSSHHHHTT-SSEEEECCSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHH----HC-------CCEEcCCHHHHHh-CCEEEEECCC
Confidence 4699999999999999999998887 8999999998766432 11 234556774 466 9999999631
Q ss_pred ccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeC
Q psy12825 256 RSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISN 295 (488)
Q Consensus 256 ~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TN 295 (488)
+ ..++++.+.+... .|+.++|..|+
T Consensus 81 ~---------------~~~~~v~~~l~~~l~~g~ivv~~st 106 (296)
T 3qha_A 81 D---------------AQVREVVGELAGHAKPGTVIAIHST 106 (296)
T ss_dssp H---------------HHHHHHHHHHHTTCCTTCEEEECSC
T ss_pred h---------------HHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 1 1234445666655 46666665554
No 92
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=97.82 E-value=0.00015 Score=70.76 Aligned_cols=95 Identities=22% Similarity=0.329 Sum_probs=63.0
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccC-CCcEEEEecc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSE-GSRIVIITAG 254 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~-dADiVIitag 254 (488)
++||+|||+|.||..++..|...+...+|+++|+++++++.. .+. . ... ..++|+ +.++ +||+||+++.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~-~~~--g----~~~--~~~~~~~~~~~~~aDvVilavp 71 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDL--G----IID--EGTTSIAKVEDFSPDFVMLSSP 71 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHT--T----SCS--EEESCGGGGGGTCCSEEEECSC
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHH-HHC--C----Ccc--cccCCHHHHhcCCCCEEEEcCC
Confidence 368999999999999999999887644799999998876542 111 1 111 224566 5688 9999999962
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCC
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNP 296 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNP 296 (488)
.. ...+++..+..+ .|+.++++++|.
T Consensus 72 ~~----------------~~~~v~~~l~~~l~~~~iv~~~~~~ 98 (281)
T 2g5c_A 72 VR----------------TFREIAKKLSYILSEDATVTDQGSV 98 (281)
T ss_dssp HH----------------HHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred HH----------------HHHHHHHHHHhhCCCCcEEEECCCC
Confidence 11 122344444443 466766666653
No 93
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.81 E-value=0.00017 Score=72.43 Aligned_cols=69 Identities=20% Similarity=0.269 Sum_probs=52.5
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-c-ccCCCcEEEEec
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-A-MSEGSRIVIITA 253 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-e-al~dADiVIita 253 (488)
..+||+|||+|.||..++..|...|...+|+++|++++.++.. .++. ... ..++++ + ++++||+||+++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a-~~~G------~~~--~~~~~~~~~~~~~aDvVilav 102 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLG------IID--EGTTSIAKVEDFSPDFVMLSS 102 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTT------SCS--EEESCTTGGGGGCCSEEEECS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHH-HHCC------Ccc--hhcCCHHHHhhccCCEEEEeC
Confidence 3579999999999999999999988766899999999876542 2211 011 234565 4 689999999996
No 94
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=97.79 E-value=2e-05 Score=76.02 Aligned_cols=96 Identities=20% Similarity=0.345 Sum_probs=65.0
Q ss_pred CceEEEEecccchHHHHHHHHHcCC--CCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGI--YSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l--~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
++||+|||+|.||..++..|+..++ ..+|.++|+++++++....++ .+..+.+. +++++||+||++.
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~----------g~~~~~~~~e~~~~aDvVilav 71 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY----------GLTTTTDNNEVAKNADILILSI 71 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH----------CCEECSCHHHHHHHCSEEEECS
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh----------CCEEeCChHHHHHhCCEEEEEe
Confidence 3689999999999999999998875 348999999998776544332 12234565 5688999999997
Q ss_pred ccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEeCCch
Q psy12825 254 GVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIISNPVD 298 (488)
Q Consensus 254 g~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~TNPvd 298 (488)
++ ..+.++.+.+..+. |+.++|..++...
T Consensus 72 ----~~------------~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 72 ----KP------------DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp ----CT------------TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred ----CH------------HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 11 13455666677664 5655554445444
No 95
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.78 E-value=0.00016 Score=76.68 Aligned_cols=100 Identities=13% Similarity=0.163 Sum_probs=69.6
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc-cc---CCCcEEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA-MS---EGSRIVI 250 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e-al---~dADiVI 250 (488)
|+.+||+|||+|.||..++..|+..|. +|.++|+++++++....... ...+..+.+++ .+ +++|+||
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~~~-------~~gi~~~~s~~e~v~~l~~aDvVi 73 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRGY--TVAIYNRTTSKTEEVFKEHQ-------DKNLVFTKTLEEFVGSLEKPRRIM 73 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHTT-------TSCEEECSSHHHHHHTBCSSCEEE
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCCC--EEEEEcCCHHHHHHHHHhCc-------CCCeEEeCCHHHHHhhccCCCEEE
Confidence 445799999999999999999999887 89999999987765443321 12355666764 33 4599999
Q ss_pred EecccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCch
Q psy12825 251 ITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVD 298 (488)
Q Consensus 251 itag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvd 298 (488)
+++.. + ..+.++.+.+... .|+.++|..+|-..
T Consensus 74 lavp~----~-----------~~v~~vl~~l~~~l~~g~iiId~s~~~~ 107 (474)
T 2iz1_A 74 LMVQA----G-----------AATDATIKSLLPLLDIGDILIDGGNTHF 107 (474)
T ss_dssp ECCCT----T-----------HHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred EEccC----c-----------hHHHHHHHHHHhhCCCCCEEEECCCCCH
Confidence 99621 1 1234445566655 46677777787654
No 96
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=97.78 E-value=0.00011 Score=71.66 Aligned_cols=93 Identities=5% Similarity=0.043 Sum_probs=62.6
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecccc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVR 256 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~~ 256 (488)
++||+|||+|.||..++..|.. +. +|.++|+++++++..... .. .+ ++..+.++++|+||++...+
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g~--~V~~~~~~~~~~~~~~~~---g~------~~--~~~~~~~~~~D~vi~~v~~~ 66 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-RF--PTLVWNRTFEKALRHQEE---FG------SE--AVPLERVAEARVIFTCLPTT 66 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-TS--CEEEECSSTHHHHHHHHH---HC------CE--ECCGGGGGGCSEEEECCSSH
T ss_pred CCeEEEEcccHHHHHHHHHHhC-CC--eEEEEeCCHHHHHHHHHC---CC------cc--cCHHHHHhCCCEEEEeCCCh
Confidence 3689999999999999999988 76 899999998877653322 11 11 12225678999999996311
Q ss_pred cCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCch
Q psy12825 257 SLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVD 298 (488)
Q Consensus 257 ~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvd 298 (488)
..+.++.+.+... .|+.+++..+|...
T Consensus 67 ---------------~~~~~v~~~l~~~l~~~~~vv~~s~~~~ 94 (289)
T 2cvz_A 67 ---------------REVYEVAEALYPYLREGTYWVDATSGEP 94 (289)
T ss_dssp ---------------HHHHHHHHHHTTTCCTTEEEEECSCCCH
T ss_pred ---------------HHHHHHHHHHHhhCCCCCEEEECCCCCH
Confidence 1133444555554 46777777777653
No 97
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.78 E-value=5.1e-05 Score=75.82 Aligned_cols=117 Identities=14% Similarity=0.102 Sum_probs=72.5
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCC---cEEEcCCccccCCCcEEEEecc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSP---KIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~---~v~~ttd~eal~dADiVIitag 254 (488)
+||+|||+|.+|..++..|+..|. +|.++|+++ .+.....=.......... .+..+++.+++.++|+||+++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~--~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vilavk 78 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE--DVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVGLK 78 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC--CEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC--eEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEecC
Confidence 699999999999999999998886 899999975 232211100000000000 2233456777889999999962
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEe
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVDVLTYISWKLSGFPKNRVIG 317 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG 317 (488)
.. .+.++.+.|..+ .|+..||.+.|-.+....+ .+. +|.++|++
T Consensus 79 ~~----------------~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l-~~~--~~~~~v~~ 123 (312)
T 3hn2_A 79 TF----------------ANSRYEELIRPLVEEGTQILTLQNGLGNEEAL-ATL--FGAERIIG 123 (312)
T ss_dssp GG----------------GGGGHHHHHGGGCCTTCEEEECCSSSSHHHHH-HHH--TCGGGEEE
T ss_pred CC----------------CcHHHHHHHHhhcCCCCEEEEecCCCCcHHHH-HHH--CCCCcEEE
Confidence 11 123445566665 5778888888988754433 333 45556654
No 98
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=97.77 E-value=7e-05 Score=74.70 Aligned_cols=66 Identities=18% Similarity=0.281 Sum_probs=52.0
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
...+||+|||+|.||..++..|+..|. +|.++|+++++++..... . +..++++ +.+++||+||++.
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~--~V~~~dr~~~~~~~~~~~---g--------~~~~~~~~e~~~~aDvVi~~v 73 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGK--RVAIWNRSPGKAAALVAA---G--------AHLCESVKAALSASPATIFVL 73 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHH---T--------CEECSSHHHHHHHSSEEEECC
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHC---C--------CeecCCHHHHHhcCCEEEEEe
Confidence 346799999999999999999999987 899999999877653321 1 1234565 5688999999996
No 99
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.73 E-value=4.3e-05 Score=71.38 Aligned_cols=99 Identities=15% Similarity=0.208 Sum_probs=65.7
Q ss_pred ceEEEEe-cccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEeccc
Q psy12825 178 QKITVVG-AGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAGV 255 (488)
Q Consensus 178 ~KIaIIG-AG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag~ 255 (488)
|||+||| +|.||..++..|+..+. +|.++|+++++++....++.... . ...+.. .++ ++++++|+||++...
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~--~-~~~~~~-~~~~~~~~~~D~Vi~~~~~ 74 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGH--EIVVGSRREEKAEAKAAEYRRIA--G-DASITG-MKNEDAAEACDIAVLTIPW 74 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSHHHHHHHHHHHHHHH--S-SCCEEE-EEHHHHHHHCSEEEECSCH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcccc--c-cCCCCh-hhHHHHHhcCCEEEEeCCh
Confidence 5899999 89999999999988876 89999999887765443332111 0 112332 344 568899999999621
Q ss_pred ccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCch
Q psy12825 256 RSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVD 298 (488)
Q Consensus 256 ~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvd 298 (488)
...+++.+.+....++.+++..+|+.+
T Consensus 75 ----------------~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 75 ----------------EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp ----------------HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred ----------------hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 112233334433335778888888765
No 100
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.73 E-value=4.9e-06 Score=84.57 Aligned_cols=59 Identities=36% Similarity=0.566 Sum_probs=47.2
Q ss_pred chHHhhhhccCCCCCCCCCcEEEEecchhHHHHHHHHHhhhhHHHHHHHH---HHHHhhhCC
Q psy12825 113 STVDRLLSQVAPSIESPDQKITVVGAGQVGMACTYSILTQTMARDAVSTV---DRLLSQVAP 171 (488)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~ki~vvg~g~vg~~~a~~~~~k~la~eivlid---~~~~~e~~~ 171 (488)
+++++|+.++.++...+..||+|||+|+||+++||+++.+++++|++++| +++.++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~D 63 (331)
T 4aj2_A 2 ALKDQLIVNLLKEEQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMD 63 (331)
T ss_dssp CHHHHHEEECCC---CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHH
T ss_pred chhhhhhhcccccccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHh
Confidence 45689999998765567789999999999999999999999999999988 445554444
No 101
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=97.73 E-value=0.00026 Score=68.97 Aligned_cols=91 Identities=19% Similarity=0.389 Sum_probs=63.6
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccccc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGVRS 257 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~~~ 257 (488)
|||+|||+|.||..++..|...+. +|+++|+++++++... +. .. .. ..++++++++++|+||+++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~~~~~~~~~~~-~~--g~----~~--~~~~~~~~~~~~D~vi~av~--- 66 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGH--YLIGVSRQQSTCEKAV-ER--QL----VD--EAGQDLSLLQTAKIIFLCTP--- 66 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHH-HT--TS----CS--EEESCGGGGTTCSEEEECSC---
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHH-hC--CC----Cc--cccCCHHHhCCCCEEEEECC---
Confidence 589999999999999999998886 8999999988776431 11 10 11 23456644499999999962
Q ss_pred CCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeC
Q psy12825 258 LVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISN 295 (488)
Q Consensus 258 k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TN 295 (488)
...+.++.+.+..+ .|+.+++.+++
T Consensus 67 -------------~~~~~~~~~~l~~~~~~~~~vv~~~~ 92 (279)
T 2f1k_A 67 -------------IQLILPTLEKLIPHLSPTAIVTDVAS 92 (279)
T ss_dssp -------------HHHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred -------------HHHHHHHHHHHHhhCCCCCEEEECCC
Confidence 11345666677665 46776666654
No 102
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=97.72 E-value=0.00025 Score=74.51 Aligned_cols=115 Identities=17% Similarity=0.181 Sum_probs=72.5
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCC----------CCCcEEEcCCcccc
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL----------RSPKIESGSDIAMS 243 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~----------~~~~v~~ttd~eal 243 (488)
..-..|.+|||+|.||..+|..|+..|. +|+.+|+++++++.+...-.... .+ ...++..++| +
T Consensus 8 ~~~~~~~~ViGlGyvGlp~A~~La~~G~--~V~~~D~~~~kv~~L~~g~~pi~-epgl~~ll~~~~~~g~l~~ttd---~ 81 (431)
T 3ojo_A 8 HHHGSKLTVVGLGYIGLPTSIMFAKHGV--DVLGVDINQQTIDKLQNGQISIE-EPGLQEVYEEVLSSGKLKVSTT---P 81 (431)
T ss_dssp ----CEEEEECCSTTHHHHHHHHHHTTC--EEEEECSCHHHHHHHHTTCCSSC-CTTHHHHHHHHHHTTCEEEESS---C
T ss_pred cccCCccEEEeeCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHCCCCCcC-CCCHHHHHHhhcccCceEEeCc---h
Confidence 3456799999999999999999999998 99999999988776433211110 00 0346777777 4
Q ss_pred CCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEe-CCch
Q psy12825 244 EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIIS-NPVD 298 (488)
Q Consensus 244 ~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~T-NPvd 298 (488)
++||+||++++.|....... .-++..+...++.|.++ .|..++|+-| -|.+
T Consensus 82 ~~aDvvii~VpTp~~~~~~~----~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pg 134 (431)
T 3ojo_A 82 EASDVFIIAVPTPNNDDQYR----SCDISLVMRALDSILPFLKKGNTIIVESTIAPK 134 (431)
T ss_dssp CCCSEEEECCCCCBCSSSSC----BBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTT
T ss_pred hhCCEEEEEeCCCccccccC----CccHHHHHHHHHHHHHhCCCCCEEEEecCCChh
Confidence 58999999988775431000 11234455556666665 3555444443 4444
No 103
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.72 E-value=9.1e-06 Score=82.53 Aligned_cols=50 Identities=36% Similarity=0.472 Sum_probs=44.6
Q ss_pred chHHhhhhccCCCCCC-CCCcEEEEecchhHHHHHHHHHhhhhHHHHHHHH
Q psy12825 113 STVDRLLSQVAPSIES-PDQKITVVGAGQVGMACTYSILTQTMARDAVSTV 162 (488)
Q Consensus 113 ~~~~~~~~~~~~~~~~-~~~ki~vvg~g~vg~~~a~~~~~k~la~eivlid 162 (488)
+++++|+.++.++.+. +.+||+|||+|+||+++||+++.+++++|++++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~D 53 (330)
T 3ldh_A 3 ALKDKLIGHLATSQEPRSYNKITVVGCDAVGMADAISVLMKDLADEVALVD 53 (330)
T ss_dssp CHHHHHSCCCSCCCCCCCCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEEC
T ss_pred hHHHHHHhhcccccccCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEE
Confidence 4568999999887554 6789999999999999999999999999999988
No 104
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.71 E-value=4.4e-05 Score=67.29 Aligned_cols=94 Identities=14% Similarity=0.179 Sum_probs=65.9
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEeccc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAGV 255 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag~ 255 (488)
.+||+|||+|.+|..++..|...+. +|.++|+++++++..+.++. ..+....+. +.++++|+||.+.+.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~--~v~v~~r~~~~~~~~a~~~~--------~~~~~~~~~~~~~~~~Divi~at~~ 90 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQY--KVTVAGRNIDHVRAFAEKYE--------YEYVLINDIDSLIKNNDVIITATSS 90 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTC--EEEEEESCHHHHHHHHHHHT--------CEEEECSCHHHHHHTCSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--EEEEEcCCHHHHHHHHHHhC--------CceEeecCHHHHhcCCCEEEEeCCC
Confidence 5699999999999998888777665 59999999988876555543 133344555 568899999999754
Q ss_pred ccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchh
Q psy12825 256 RSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDV 299 (488)
Q Consensus 256 ~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi 299 (488)
+. +-... ....|..+++.+++|.++
T Consensus 91 ~~-~~~~~------------------~~l~~g~~vid~~~p~~~ 115 (144)
T 3oj0_A 91 KT-PIVEE------------------RSLMPGKLFIDLGNPPNI 115 (144)
T ss_dssp SS-CSBCG------------------GGCCTTCEEEECCSSCSB
T ss_pred CC-cEeeH------------------HHcCCCCEEEEccCCccC
Confidence 42 10100 112457888999999763
No 105
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=97.71 E-value=7.5e-05 Score=74.54 Aligned_cols=101 Identities=15% Similarity=0.215 Sum_probs=65.8
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeC--ChhHHHHHHHHHhhcCCCC-CCCcEEEcC--Cc-cccCCCcEEEE
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDS--NEDRCKGEMLDLQHGAPFL-RSPKIESGS--DI-AMSEGSRIVII 251 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di--~~e~l~g~~~dL~~~~~~~-~~~~v~~tt--d~-eal~dADiVIi 251 (488)
|||+|||+|.||..++..|+..+. +|.++|+ ++++++.....-.+. .+. ....+..++ ++ ++++++|+||+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~D~vi~ 77 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGN--EVRIWGTEFDTEILKSISAGREHP-RLGVKLNGVEIFWPEQLEKCLENAEVVLL 77 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCC--EEEEECCGGGHHHHHHHHTTCCBT-TTTBCCCSEEEECGGGHHHHHTTCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC--eEEEEEccCCHHHHHHHHHhCcCc-ccCccccceEEecHHhHHHHHhcCCEEEE
Confidence 589999999999999999998886 8999999 887665432211000 000 002345555 65 46899999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCc
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPv 297 (488)
+.... .+.++.+.+....|+.++|.++|..
T Consensus 78 ~v~~~----------------~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 78 GVSTD----------------GVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp CSCGG----------------GHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred cCChH----------------HHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 97311 1233444444434577777777766
No 106
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.70 E-value=8.3e-05 Score=74.28 Aligned_cols=118 Identities=10% Similarity=0.159 Sum_probs=73.1
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE-cCCccccCCCcEEEEeccc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES-GSDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~-ttd~eal~dADiVIitag~ 255 (488)
+|||+|||+|.||..++..|+ .+. +|.++++++++++.....=-... ......... +.+.++..++|+||+++-
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~--~V~~~~r~~~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~~~~~D~vilavK- 76 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYH--DVTVVTRRQEQAAAIQSEGIRLY-KGGEEFRADCSADTSINSDFDLLVVTVK- 76 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS--EEEEECSCHHHHHHHHHHCEEEE-ETTEEEEECCEEESSCCSCCSEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCC--ceEEEECCHHHHHHHHhCCceEe-cCCCeecccccccccccCCCCEEEEEeC-
Confidence 379999999999999999998 775 99999999876654432100000 000000110 011245789999999962
Q ss_pred ccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEee
Q psy12825 256 RSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGS 318 (488)
Q Consensus 256 ~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~ 318 (488)
+. .+.++.+.+..+.++. ||.+.|-.+..- .+.++ +|.++|++-
T Consensus 77 ---~~------------~~~~~l~~l~~~~~~~-ivs~~nGi~~~e-~l~~~--~~~~~vl~g 120 (307)
T 3ego_A 77 ---QH------------QLQSVFSSLERIGKTN-ILFLQNGMGHIH-DLKDW--HVGHSIYVG 120 (307)
T ss_dssp ---GG------------GHHHHHHHTTSSCCCE-EEECCSSSHHHH-HHHTC--CCSCEEEEE
T ss_pred ---HH------------HHHHHHHHhhcCCCCe-EEEecCCccHHH-HHHHh--CCCCcEEEE
Confidence 11 1345556666665666 888889887542 33333 566777644
No 107
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.68 E-value=0.00012 Score=71.85 Aligned_cols=92 Identities=17% Similarity=0.303 Sum_probs=64.5
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccc
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~ 255 (488)
++||+|||+ |.||..++..|...+. +|+++|+++++++.... . . +..++..+.+++||+||+++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~-~--g--------~~~~~~~~~~~~aDvVi~av~- 76 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAH--HLAAIEIAPEGRDRLQG-M--G--------IPLTDGDGWIDEADVVVLALP- 76 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSS--EEEEECCSHHHHHHHHH-T--T--------CCCCCSSGGGGTCSEEEECSC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHh-c--C--------CCcCCHHHHhcCCCEEEEcCC-
Confidence 369999999 9999999999998886 89999999887664322 1 1 111223367899999999962
Q ss_pred ccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCc
Q psy12825 256 RSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPV 297 (488)
Q Consensus 256 ~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPv 297 (488)
. ..+.++.+.+..+ .|+.+++..++..
T Consensus 77 -------------~--~~~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 77 -------------D--NIIEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -------------H--HHHHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -------------c--hHHHHHHHHHHHhCCCCCEEEECCCCc
Confidence 1 1246666777665 4566666655543
No 108
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.68 E-value=4.6e-05 Score=78.17 Aligned_cols=93 Identities=14% Similarity=0.233 Sum_probs=64.3
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCC---cEEEE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGS---RIVII 251 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dA---DiVIi 251 (488)
+.+||+|||+|.||..++..|+..|. +|.+||+++++++... .. .+..++++ +.++++ |+||+
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~--~V~v~dr~~~~~~~l~----~~-------g~~~~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGH--ECVVYDLNVNAVQALE----RE-------GIAGARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHH----TT-------TCBCCSSHHHHHHHSCSSCEEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHH----HC-------CCEEeCCHHHHHhcCCCCCEEEE
Confidence 56899999999999999999999986 8999999998766432 21 12234455 345667 99999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCc
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPV 297 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPv 297 (488)
+...+ .+.++...+... .|+.+||..+|-.
T Consensus 88 ~vp~~----------------~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 88 MVPAA----------------VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp CSCGG----------------GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred eCCHH----------------HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 96211 234444556655 4677777776643
No 109
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=97.67 E-value=0.00011 Score=72.37 Aligned_cols=63 Identities=21% Similarity=0.367 Sum_probs=49.7
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
+||+|||+|.||..++..|...+. +|.++|+++++++.... . .+..+.++ +.++++|+||++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~~~~~~~~~~~~----~-------g~~~~~~~~~~~~~~D~vi~~v 69 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY--SLVVSDRNPEAIADVIA----A-------GAETASTAKAIAEQCDVIITML 69 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC--EEEEECSCHHHHHHHHH----T-------TCEECSSHHHHHHHCSEEEECC
T ss_pred ceEEEECchHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHH----C-------CCeecCCHHHHHhCCCEEEEEC
Confidence 699999999999999999998876 89999999887664321 1 12334566 4688999999996
No 110
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.67 E-value=8.8e-05 Score=74.33 Aligned_cols=117 Identities=20% Similarity=0.240 Sum_probs=70.4
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHH-HhhcCCCCCCC---cEEEcCCccccC-CCcEEEEe
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLD-LQHGAPFLRSP---KIESGSDIAMSE-GSRIVIIT 252 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~d-L~~~~~~~~~~---~v~~ttd~eal~-dADiVIit 252 (488)
+||+|||+|.+|..++..|+..|. +|.++|+++ .+..... +.-........ .+..++|.+++. ++|+||++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~--~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVila 78 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH--CVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLC 78 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC--EEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC--eEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEe
Confidence 799999999999999999998886 999999975 2322221 10000001111 122346776555 99999999
Q ss_pred cccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEe
Q psy12825 253 AGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVDVLTYISWKLSGFPKNRVIG 317 (488)
Q Consensus 253 ag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG 317 (488)
+-.. . +.++.+.+..+ .|+..|+.+.|-.+... .+.+. +|.++|++
T Consensus 79 vK~~----~------------~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~-~l~~~--~~~~~vl~ 125 (320)
T 3i83_A 79 IKVV----E------------GADRVGLLRDAVAPDTGIVLISNGIDIEP-EVAAA--FPDNEVIS 125 (320)
T ss_dssp CCCC----T------------TCCHHHHHTTSCCTTCEEEEECSSSSCSH-HHHHH--STTSCEEE
T ss_pred cCCC----C------------hHHHHHHHHhhcCCCCEEEEeCCCCChHH-HHHHH--CCCCcEEE
Confidence 7221 1 12234455554 46778888889776332 23333 44455553
No 111
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=97.65 E-value=0.00014 Score=72.43 Aligned_cols=93 Identities=18% Similarity=0.208 Sum_probs=64.3
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEeccc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAGV 255 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag~ 255 (488)
.+||+|||+|.||..++..|+..+. +|.++|+++++++.... . .+..+.++ ++++++|+||++...
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~--~V~~~~~~~~~~~~~~~----~-------g~~~~~~~~~~~~~~DvVi~av~~ 96 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGH--TVTVWNRTAEKCDLFIQ----E-------GARLGRTPAEVVSTCDITFACVSD 96 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTC--CEEEECSSGGGGHHHHH----T-------TCEECSCHHHHHHHCSEEEECCSS
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHH----c-------CCEEcCCHHHHHhcCCEEEEeCCC
Confidence 5799999999999999999998886 89999999887764321 1 11234455 568899999999621
Q ss_pred ccCCCcchHhhHhhhHHHHHHHHHHH----hccCCCcEEEEEeCCc
Q psy12825 256 RSLVGETRLQLVDRNVKIFKDLIPKI----AKGSPDCILLIISNPV 297 (488)
Q Consensus 256 ~~k~G~~r~dll~~N~~ii~ei~~~I----~~~~p~a~vIv~TNPv 297 (488)
+ ..++++...+ ....|+.++|.++|-.
T Consensus 97 ~---------------~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~ 127 (316)
T 2uyy_A 97 P---------------KAAKDLVLGPSGVLQGIRPGKCYVDMSTVD 127 (316)
T ss_dssp H---------------HHHHHHHHSTTCGGGGCCTTCEEEECSCCC
T ss_pred H---------------HHHHHHHcCchhHhhcCCCCCEEEECCCCC
Confidence 1 1233444433 2345777777787754
No 112
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.61 E-value=0.00016 Score=76.82 Aligned_cols=101 Identities=16% Similarity=0.179 Sum_probs=68.0
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc----cCCCcEEEEec
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM----SEGSRIVIITA 253 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea----l~dADiVIita 253 (488)
|||+|||+|.||..++..|+..|. +|.++|+++++++....+.... +....+..++|+++ ++++|+||+++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~--~V~v~dr~~~~~~~l~~~~g~~---~~~~~i~~~~~~~e~v~~l~~aDvVilaV 76 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGF--KVAVFNRTYSKSEEFMKANASA---PFAGNLKAFETMEAFAASLKKPRKALILV 76 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHTTTS---TTGGGEEECSCHHHHHHHBCSSCEEEECC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhcCCC---CCCCCeEEECCHHHHHhcccCCCEEEEec
Confidence 689999999999999999999887 8999999998777554332110 01123666677643 34699999997
Q ss_pred ccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCch
Q psy12825 254 GVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVD 298 (488)
Q Consensus 254 g~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvd 298 (488)
.. +. .+.++.+.+..+ .|+.+||..+|-..
T Consensus 77 p~----~~-----------~v~~vl~~l~~~l~~g~iIId~sng~~ 107 (478)
T 1pgj_A 77 QA----GA-----------ATDSTIEQLKKVFEKGDILVDTGNAHF 107 (478)
T ss_dssp CC----SH-----------HHHHHHHHHHHHCCTTCEEEECCCCCH
T ss_pred CC----hH-----------HHHHHHHHHHhhCCCCCEEEECCCCCh
Confidence 21 11 223344445444 46777777887654
No 113
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=97.61 E-value=0.00016 Score=71.19 Aligned_cols=65 Identities=17% Similarity=0.280 Sum_probs=49.9
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
+++||+|||+|.||..++..|...+. +|+++|+++++++.. .+. .+..++++ +.++++|+||++.
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~~~~~~~~~~----~~~-------g~~~~~~~~~~~~~~D~vi~~v 68 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGV--TVYAFDLMEANVAAV----VAQ-------GAQACENNQKVAAASDIIFTSL 68 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTC--EEEEECSSHHHHHHH----HTT-------TCEECSSHHHHHHHCSEEEECC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHH----HHC-------CCeecCCHHHHHhCCCEEEEEC
Confidence 35799999999999999999998886 899999998776543 221 12334566 4578999999996
No 114
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.60 E-value=9.1e-05 Score=78.93 Aligned_cols=100 Identities=15% Similarity=0.277 Sum_probs=68.6
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc----ccCCCcEEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA----MSEGSRIVI 250 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e----al~dADiVI 250 (488)
+.++||+|||+|.||..++..|+..|+ +|+++|+++++++.....- . ...++..+.+++ .++++|+||
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~g---~---~g~~i~~~~s~~e~v~~l~~aDvVi 73 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHGF--VVCAFNRTVSKVDDFLANE---A---KGTKVVGAQSLKEMVSKLKKPRRII 73 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTTC--CEEEECSSTHHHHHHHHTT---T---TTSSCEECSSHHHHHHTBCSSCEEE
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHhcc---c---CCCceeccCCHHHHHhhccCCCEEE
Confidence 356899999999999999999999987 8999999998776533211 0 122444455653 355799999
Q ss_pred EecccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCc
Q psy12825 251 ITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPV 297 (488)
Q Consensus 251 itag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPv 297 (488)
+++.. + +.+.++...+... .|+.++|..+|-.
T Consensus 74 l~Vp~----~-----------~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 74 LLVKA----G-----------QAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp ECSCS----S-----------HHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred EecCC----h-----------HHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 99621 1 1234445566555 5777778777754
No 115
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.60 E-value=5e-05 Score=78.77 Aligned_cols=121 Identities=10% Similarity=0.074 Sum_probs=80.5
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCC------CCeEEEEeCChhHH-HHHHHHHhhcC----C---CCCCCcEEEcCC
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGI------YSNFCLIDSNEDRC-KGEMLDLQHGA----P---FLRSPKIESGSD 239 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l------~~el~L~Di~~e~l-~g~~~dL~~~~----~---~~~~~~v~~ttd 239 (488)
..++.||+|||||+.|+++|..|+.++. ..+|.||.++++.. +.....++..- . +....++..++|
T Consensus 31 ~~~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~d 110 (391)
T 4fgw_A 31 AEKPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPD 110 (391)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESC
T ss_pred cCCCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCC
Confidence 3457799999999999999999997642 13699998765421 11233333211 1 123567888999
Q ss_pred c-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEeCC-------chhHHHHHHHhcCC
Q psy12825 240 I-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIISNP-------VDVLTYISWKLSGF 310 (488)
Q Consensus 240 ~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~TNP-------vdi~t~~~~k~sg~ 310 (488)
+ +++++||+||+++. ...++++++++..+- ++..+|.++.= ..++++++.+..+.
T Consensus 111 l~~al~~ad~ii~avP----------------s~~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~~ 174 (391)
T 4fgw_A 111 LIDSVKDVDIIVFNIP----------------HQFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGI 174 (391)
T ss_dssp HHHHHTTCSEEEECSC----------------GGGHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHCC
T ss_pred HHHHHhcCCEEEEECC----------------hhhhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHhCc
Confidence 8 67999999999862 235688888888774 56666666532 23677777766543
No 116
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=97.59 E-value=0.00017 Score=72.49 Aligned_cols=101 Identities=15% Similarity=0.124 Sum_probs=63.7
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHh-hcCC--CCCCCcE-EEcCCc-cccCCCcEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQ-HGAP--FLRSPKI-ESGSDI-AMSEGSRIV 249 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~-~~~~--~~~~~~v-~~ttd~-eal~dADiV 249 (488)
|+++||+|||+|.||..++..|+..+. +|.++|+++++++....... .... .....++ ..++|+ ++++++|+|
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 79 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKGQ--SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVI 79 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEE
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEE
Confidence 345799999999999999999998886 89999999887765433211 0000 0000112 234566 458899999
Q ss_pred EEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEEE
Q psy12825 250 IITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLII 293 (488)
Q Consensus 250 Iitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~ 293 (488)
|+++... ...++++.+..+. ++.+++..
T Consensus 80 i~~v~~~----------------~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 80 LIVVPAI----------------HHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EECSCGG----------------GHHHHHHHHGGGCCTTCEEEES
T ss_pred EEeCCch----------------HHHHHHHHHHHhCCCCCEEEEc
Confidence 9997321 1134556666653 55655544
No 117
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.55 E-value=0.00027 Score=75.18 Aligned_cols=98 Identities=13% Similarity=0.232 Sum_probs=66.2
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc----cCCCcEEEEec
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM----SEGSRIVIITA 253 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea----l~dADiVIita 253 (488)
+||+|||+|.||..++..|+..|. +|.++|+++++++..... +. . ...+..++++++ ++++|+||+++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~--~V~v~dr~~~~~~~l~~~--~~---~-g~gi~~~~~~~e~v~~l~~aDvVilaV 74 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF--VVCAFNRTVSKVDDFLAN--EA---K-GTKVLGAHSLEEMVSKLKKPRRIILLV 74 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC--CEEEECSSTHHHHHHHHT--TT---T-TSSCEECSSHHHHHHHBCSSCEEEECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHhc--cc---c-CCCeEEeCCHHHHHhhccCCCEEEEeC
Confidence 689999999999999999999887 899999998877654321 00 0 023455667643 36999999996
Q ss_pred ccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCch
Q psy12825 254 GVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVD 298 (488)
Q Consensus 254 g~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvd 298 (488)
.. +. .+.++...+..+ .|+.+||..+|-..
T Consensus 75 p~----~~-----------~v~~vl~~l~~~l~~g~iII~~s~~~~ 105 (482)
T 2pgd_A 75 KA----GQ-----------AVDNFIEKLVPLLDIGDIIIDGGNSEY 105 (482)
T ss_dssp CT----TH-----------HHHHHHHHHHHHCCTTCEEEECSCCCH
T ss_pred CC----hH-----------HHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 21 11 223334445444 45677777777654
No 118
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.55 E-value=0.00044 Score=69.41 Aligned_cols=68 Identities=10% Similarity=0.039 Sum_probs=49.6
Q ss_pred CceEEEEecccchHHHHHHHHHcC-CCCeEEEEeCCh---hHHHHHHHHHhhcCCCCCCCcEEEc-CCccccCCCcEEEE
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQG-IYSNFCLIDSNE---DRCKGEMLDLQHGAPFLRSPKIESG-SDIAMSEGSRIVII 251 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~-l~~el~L~Di~~---e~l~g~~~dL~~~~~~~~~~~v~~t-td~eal~dADiVIi 251 (488)
++||+|||+|.||..++..|+..| . +|+++|+++ ++.+.....+... . + .+ +..+++++||+||+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~--~V~~~dr~~~~~~~~~~~~~~~~~~----g---~-~~~s~~e~~~~aDvVi~ 93 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAA--RLAAYDLRFNDPAASGALRARAAEL----G---V-EPLDDVAGIACADVVLS 93 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCS--EEEEECGGGGCTTTHHHHHHHHHHT----T---C-EEESSGGGGGGCSEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCC--eEEEEeCCCccccchHHHHHHHHHC----C---C-CCCCHHHHHhcCCEEEE
Confidence 469999999999999999999988 6 899999987 2333333333321 1 1 23 33467899999999
Q ss_pred ecc
Q psy12825 252 TAG 254 (488)
Q Consensus 252 tag 254 (488)
++.
T Consensus 94 avp 96 (317)
T 4ezb_A 94 LVV 96 (317)
T ss_dssp CCC
T ss_pred ecC
Confidence 973
No 119
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.53 E-value=8.5e-05 Score=76.68 Aligned_cols=98 Identities=12% Similarity=0.114 Sum_probs=60.7
Q ss_pred CceEEEEecccchHHHHHHHHHc-CCCCeEEEEe---CChhHHHHHHHHHhh--cCCCCCC------CcE-EEcCCc-cc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQ-GIYSNFCLID---SNEDRCKGEMLDLQH--GAPFLRS------PKI-ESGSDI-AM 242 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~-~l~~el~L~D---i~~e~l~g~~~dL~~--~~~~~~~------~~v-~~ttd~-ea 242 (488)
+|||+|||+|.||..++..|+.. |. +|.++| ++++.++.......- ....... .++ ..++|+ ++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~--~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 79 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGV--EVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIA 79 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTE--EEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCC--EEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHH
Confidence 37999999999999999999874 76 899999 766655432111000 0000001 012 245677 46
Q ss_pred cCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC-CCcEEEE
Q psy12825 243 SEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS-PDCILLI 292 (488)
Q Consensus 243 l~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv 292 (488)
+++||+||+++... ..+++++.|..+. |+.+|+.
T Consensus 80 ~~~aD~Vilav~~~----------------~~~~v~~~l~~~l~~~~ivv~ 114 (404)
T 3c7a_A 80 ISGADVVILTVPAF----------------AHEGYFQAMAPYVQDSALIVG 114 (404)
T ss_dssp HTTCSEEEECSCGG----------------GHHHHHHHHTTTCCTTCEEEE
T ss_pred hCCCCEEEEeCchH----------------HHHHHHHHHHhhCCCCcEEEE
Confidence 89999999997321 1356667777764 4554433
No 120
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.52 E-value=0.00087 Score=57.45 Aligned_cols=67 Identities=27% Similarity=0.447 Sum_probs=47.3
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc-----cccCCCcEE
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI-----AMSEGSRIV 249 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~-----eal~dADiV 249 (488)
.+||+|+|+|.+|..++..|...+. +++++|.++++++....+.. ..+... ++. ..+.++|+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~--~v~~~d~~~~~~~~~~~~~~--------~~~~~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH--DIVLIDIDKDICKKASAEID--------ALVINGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCS--------SEEEESCTTSHHHHHHTTTTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHhcC--------cEEEEcCCCCHHHHHHcCcccCCEE
Confidence 4799999999999999999988875 89999999877654322211 111111 122 237899999
Q ss_pred EEec
Q psy12825 250 IITA 253 (488)
Q Consensus 250 Iita 253 (488)
|++.
T Consensus 74 i~~~ 77 (140)
T 1lss_A 74 IAVT 77 (140)
T ss_dssp EECC
T ss_pred EEee
Confidence 9996
No 121
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=97.52 E-value=6.3e-05 Score=73.26 Aligned_cols=99 Identities=17% Similarity=0.161 Sum_probs=66.2
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCC--CCcEEEcCCccccCCCcEEEEeccc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLR--SPKIESGSDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~--~~~v~~ttd~eal~dADiVIitag~ 255 (488)
|||+|||+|.||..++..|+..|. +|.++|+++++++. +........ ...+. .++.++++++|+||++...
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~r~~~~~~~----l~~~~~~~~~~~~~~~-~~~~~~~~~~d~vi~~v~~ 73 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGH--EVQGWLRVPQPYCS----VNLVETDGSIFNESLT-ANDPDFLATSDLLLVTLKA 73 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCSEEE----EEEECTTSCEEEEEEE-ESCHHHHHTCSEEEECSCG
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC--CEEEEEcCccceee----EEEEcCCCceeeeeee-ecCccccCCCCEEEEEecH
Confidence 589999999999999999999887 89999998765432 221100000 01122 2445678899999999731
Q ss_pred ccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCchh
Q psy12825 256 RSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVDV 299 (488)
Q Consensus 256 ~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvdi 299 (488)
. .+.++.+.+..+ .|+.+++..+|..+.
T Consensus 74 ~----------------~~~~v~~~l~~~l~~~~~vv~~~~g~~~ 102 (291)
T 1ks9_A 74 W----------------QVSDAVKSLASTLPVTTPILLIHNGMGT 102 (291)
T ss_dssp G----------------GHHHHHHHHHTTSCTTSCEEEECSSSCT
T ss_pred H----------------hHHHHHHHHHhhCCCCCEEEEecCCCCc
Confidence 1 124555566665 467778888887654
No 122
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.52 E-value=1.1e-05 Score=80.59 Aligned_cols=42 Identities=21% Similarity=0.300 Sum_probs=36.7
Q ss_pred CcEEEEecchhHHHHHHHHHhhhhHHHHHHHH---HHHHhhhCCC
Q psy12825 131 QKITVVGAGQVGMACTYSILTQTMARDAVSTV---DRLLSQVAPS 172 (488)
Q Consensus 131 ~ki~vvg~g~vg~~~a~~~~~k~la~eivlid---~~~~~e~~~~ 172 (488)
.||+|||+|+||.++||+++++++++|++++| ++..++.+|.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL 45 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDL 45 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhh
Confidence 49999999999999999999999999999999 4566666553
No 123
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=97.51 E-value=8e-05 Score=73.05 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=47.6
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
+++||+|||+|.||..++..|...+. +|.++| ++++++... +. .+..+.++ +.++++|+||++.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~-~~~~~~~~~----~~-------g~~~~~~~~~~~~~~D~vi~~v 66 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARAGH--QLHVTT-IGPVADELL----SL-------GAVNVETARQVTEFADIIFIMV 66 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHTTC--EEEECC-SSCCCHHHH----TT-------TCBCCSSHHHHHHTCSEEEECC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCC--EEEEEc-CHHHHHHHH----Hc-------CCcccCCHHHHHhcCCEEEEEC
Confidence 35799999999999999999998876 899999 887665432 11 11223455 4588999999996
No 124
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=97.49 E-value=0.00038 Score=69.63 Aligned_cols=66 Identities=11% Similarity=0.187 Sum_probs=48.6
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCC--hhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEe
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSN--EDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIIT 252 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~--~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIit 252 (488)
+++||+|||+|.||..++..|+..|. .+|+++|++ +++.+. +.+. .+..++++ +++++||+||++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~-~~V~~~dr~~~~~~~~~----~~~~-------g~~~~~~~~e~~~~aDvVi~~ 90 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGA-IDMAAYDAASAESWRPR----AEEL-------GVSCKASVAEVAGECDVIFSL 90 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSC-CEEEEECSSCHHHHHHH----HHHT-------TCEECSCHHHHHHHCSEEEEC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCC-CeEEEEcCCCCHHHHHH----HHHC-------CCEEeCCHHHHHhcCCEEEEe
Confidence 46799999999999999999998884 489999997 444432 2221 12345566 568999999999
Q ss_pred c
Q psy12825 253 A 253 (488)
Q Consensus 253 a 253 (488)
+
T Consensus 91 v 91 (312)
T 3qsg_A 91 V 91 (312)
T ss_dssp S
T ss_pred c
Confidence 6
No 125
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.00035 Score=74.68 Aligned_cols=100 Identities=14% Similarity=0.188 Sum_probs=68.8
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc-ccC---CCcEEEE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA-MSE---GSRIVII 251 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e-al~---dADiVIi 251 (488)
-..+|+|||+|.||..++..|+..|. +|.++|+++++++....... . ...+..+.+++ .++ ++|+||+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~--~V~v~dr~~~~~~~l~~~~~-----~-~~gi~~~~s~~e~v~~l~~aDvVil 80 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGF--TVCAYNRTQSKVDHFLANEA-----K-GKSIIGATSIEDFISKLKRPRKVML 80 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC--CEEEECSSSHHHHHHHHTTT-----T-TSSEECCSSHHHHHHTSCSSCEEEE
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHcccc-----c-CCCeEEeCCHHHHHhcCCCCCEEEE
Confidence 34699999999999999999999997 89999999987765332110 0 12355566763 344 4999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCch
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVD 298 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvd 298 (488)
++.. + ..++++.+.+..+ .|+.+||..+|-..
T Consensus 81 ~Vp~----~-----------~~v~~vl~~l~~~l~~g~iIId~s~~~~ 113 (497)
T 2p4q_A 81 LVKA----G-----------APVDALINQIVPLLEKGDIIIDGGNSHF 113 (497)
T ss_dssp CCCS----S-----------HHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred EcCC----h-----------HHHHHHHHHHHHhCCCCCEEEECCCCCh
Confidence 9721 1 1344555666666 45677787887643
No 126
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.47 E-value=0.00013 Score=72.11 Aligned_cols=104 Identities=14% Similarity=0.095 Sum_probs=65.6
Q ss_pred CceEEEEecccchHHHHHHHHHc-----C-CCCeEEEEeCChhHHHHHHHHHh-hcCCCCC---CCcEEEcCCccccCCC
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQ-----G-IYSNFCLIDSNEDRCKGEMLDLQ-HGAPFLR---SPKIESGSDIAMSEGS 246 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~-----~-l~~el~L~Di~~e~l~g~~~dL~-~~~~~~~---~~~v~~ttd~eal~dA 246 (488)
+|||+|||+|.||..++..|+.. + . +|.++|+ +++++....+.. ....... ..++..+++.++++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~--~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLL--EVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTV 84 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSE--EEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCC--CEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCC
Confidence 46999999999999999999887 6 5 8999998 665554332110 0000000 0112334555678899
Q ss_pred cEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCchh
Q psy12825 247 RIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVDV 299 (488)
Q Consensus 247 DiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvdi 299 (488)
|+||++.... . +.++.+.+..+ .|+.+||.++|-.+.
T Consensus 85 D~vil~vk~~----~------------~~~v~~~i~~~l~~~~~iv~~~nG~~~ 122 (317)
T 2qyt_A 85 DYILFCTKDY----D------------MERGVAEIRPMIGQNTKILPLLNGADI 122 (317)
T ss_dssp EEEEECCSSS----C------------HHHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred CEEEEecCcc----c------------HHHHHHHHHhhcCCCCEEEEccCCCCc
Confidence 9999997321 1 23444555554 456667777887654
No 127
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.41 E-value=0.0001 Score=69.68 Aligned_cols=93 Identities=14% Similarity=0.215 Sum_probs=61.8
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEecc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAG 254 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag 254 (488)
+++||+|||+|.+|..++..|...+. +|.++|+++++++. +.+. . +..+ ++ ++++++|+||++..
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~--~V~~~~r~~~~~~~----~~~~-----g--~~~~-~~~~~~~~~DvVi~av~ 92 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGF--KVVVGSRNPKRTAR----LFPS-----A--AQVT-FQEEAVSSPEVIFVAVF 92 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTC--CEEEEESSHHHHHH----HSBT-----T--SEEE-EHHHHTTSCSEEEECSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHH----HHHc-----C--Ccee-cHHHHHhCCCEEEECCC
Confidence 45799999999999999999998886 89999999876553 2211 1 1222 44 56899999999973
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchh
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDV 299 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi 299 (488)
.. . ..+++ . +....++.+++.++|+...
T Consensus 93 ~~----~-~~~v~-------~-----l~~~~~~~~vv~~s~g~~~ 120 (215)
T 2vns_A 93 RE----H-YSSLC-------S-----LSDQLAGKILVDVSNPTEQ 120 (215)
T ss_dssp GG----G-SGGGG-------G-----GHHHHTTCEEEECCCCCHH
T ss_pred hH----H-HHHHH-------H-----HHHhcCCCEEEEeCCCccc
Confidence 11 1 11111 1 2222367888889998764
No 128
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.35 E-value=0.0011 Score=62.35 Aligned_cols=110 Identities=15% Similarity=0.105 Sum_probs=73.5
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE---cCCc-cccCCCc
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES---GSDI-AMSEGSR 247 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~---ttd~-eal~dAD 247 (488)
..++.+||.|+|| |.+|..++..|+..|. +|+++++++++++..... .. ..+.. +.+. +++.++|
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~~~~~~--~~------~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGH--EPVAMVRNEEQGPELRER--GA------SDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHT--TC------SEEEECCTTSCCGGGGTTCS
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCC--eEEEEECChHHHHHHHhC--CC------ceEEEcccHHHHHHHHcCCC
Confidence 4456789999999 9999999999999886 999999998876543211 00 01111 0233 5789999
Q ss_pred EEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 248 IVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 248 iVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+||.+++.... ......+..|+.-...+.+.+.+.... .+|++|-
T Consensus 87 ~vi~~ag~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS 131 (236)
T 3e8x_A 87 AVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRGIK-RFIMVSS 131 (236)
T ss_dssp EEEECCCCCTT--SCHHHHHHTTTHHHHHHHHHHHHHTCC-EEEEECC
T ss_pred EEEECCCCCCC--CCccccchhhHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 99999875432 234555667877777778887776544 3555543
No 129
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=97.33 E-value=0.00034 Score=68.68 Aligned_cols=63 Identities=19% Similarity=0.295 Sum_probs=49.2
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
|||+|||+|.||..++..|+..+. +|.++|+++++++.. .+. .+..++++ +.++++|+||++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~--~V~~~~~~~~~~~~~----~~~-------g~~~~~~~~~~~~~~Dvvi~~v 64 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGY--PLIIYDVFPDACKEF----QDA-------GEQVVSSPADVAEKADRIITML 64 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTC--CEEEECSSTHHHHHH----HTT-------TCEECSSHHHHHHHCSEEEECC
T ss_pred CeEEEEeccHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHH----HHc-------CCeecCCHHHHHhcCCEEEEeC
Confidence 589999999999999999998886 899999998876542 221 12344566 4578999999996
No 130
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.32 E-value=0.00048 Score=68.82 Aligned_cols=64 Identities=17% Similarity=0.320 Sum_probs=51.0
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
++||++||.|.||..+|..|+..|+ +|+.||+++++++... .. -.....++ +..++||+||.+.
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~--~v~v~dr~~~~~~~l~----~~-------Ga~~a~s~~e~~~~~dvv~~~l 67 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGY--LLNVFDLVQSAVDGLV----AA-------GASAARSARDAVQGADVVISML 67 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC--EEEEECSSHHHHHHHH----HT-------TCEECSSHHHHHTTCSEEEECC
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCC--eEEEEcCCHHHHHHHH----Hc-------CCEEcCCHHHHHhcCCceeecC
Confidence 5699999999999999999999998 8999999998776432 21 11234566 5689999999985
No 131
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.31 E-value=0.00011 Score=72.75 Aligned_cols=108 Identities=16% Similarity=0.222 Sum_probs=67.7
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcccc-CCCcEEEEecccc
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMS-EGSRIVIITAGVR 256 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal-~dADiVIitag~~ 256 (488)
+||+|||+|.+|..++..|+..+. +|.++|++++.++ +..... .....+. ....+++ .++|+||+++-
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~--~V~~~~r~~~~~~-----~~~~~g-~~~~~~~-~~~~~~~~~~~D~vilavk-- 71 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP--HTTLIGRHAKTIT-----YYTVPH-APAQDIV-VKGYEDVTNTFDVIIIAVK-- 71 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT--TCEEEESSCEEEE-----EESSTT-SCCEEEE-EEEGGGCCSCEEEEEECSC--
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC--eEEEEEeccCcEE-----EEecCC-eecccee-cCchHhcCCCCCEEEEeCC--
Confidence 699999999999999999998886 8999999865432 111100 0011222 2223555 89999999962
Q ss_pred cCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEe
Q psy12825 257 SLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPVDVLTYISWKLSGFPKNRVIG 317 (488)
Q Consensus 257 ~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG 317 (488)
+. .+.++.+.+..+ .|+..||.+.|-.+.... +|.++|++
T Consensus 72 --~~------------~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~-------~~~~~v~~ 112 (294)
T 3g17_A 72 --TH------------QLDAVIPHLTYLAHEDTLIILAQNGYGQLEH-------IPFKNVCQ 112 (294)
T ss_dssp --GG------------GHHHHGGGHHHHEEEEEEEEECCSSCCCGGG-------CCCSCEEE
T ss_pred --cc------------CHHHHHHHHHHhhCCCCEEEEeccCcccHhh-------CCCCcEEE
Confidence 11 123334444443 456778888898765322 56666654
No 132
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.28 E-value=0.0063 Score=55.23 Aligned_cols=134 Identities=13% Similarity=0.166 Sum_probs=78.6
Q ss_pred CCCceEEEEecccchHHHHHHHHHc-CCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CC---c-cc--cCC
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQ-GIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SD---I-AM--SEG 245 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~-~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td---~-ea--l~d 245 (488)
...++|.|+|+|.+|..++..|... +. +|+++|.++++++... +. . ..+... ++ + ++ +.+
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~--~V~vid~~~~~~~~~~-~~--g------~~~~~gd~~~~~~l~~~~~~~~ 105 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK--ISLGIEIREEAAQQHR-SE--G------RNVISGDATDPDFWERILDTGH 105 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS--CEEEEESCHHHHHHHH-HT--T------CCEEECCTTCHHHHHTBCSCCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC--eEEEEECCHHHHHHHH-HC--C------CCEEEcCCCCHHHHHhccCCCC
Confidence 4467999999999999999999887 86 8999999998765421 11 1 122211 22 1 23 789
Q ss_pred CcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCChHHH
Q psy12825 246 SRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTNLDSM 325 (488)
Q Consensus 246 ADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~ 325 (488)
+|+||++.+. ......++..+++.+|+..++..+|-.+.. ..+.+ .|. +.++.- ...-..
T Consensus 106 ad~vi~~~~~---------------~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-~~l~~-~G~--~~vi~p-~~~~a~ 165 (183)
T 3c85_A 106 VKLVLLAMPH---------------HQGNQTALEQLQRRNYKGQIAAIAEYPDQL-EGLLE-SGV--DAAFNI-YSEAGS 165 (183)
T ss_dssp CCEEEECCSS---------------HHHHHHHHHHHHHTTCCSEEEEEESSHHHH-HHHHH-HTC--SEEEEH-HHHHHH
T ss_pred CCEEEEeCCC---------------hHHHHHHHHHHHHHCCCCEEEEEECCHHHH-HHHHH-cCC--CEEEch-HHHHHH
Confidence 9999998531 112223344556667777777766644332 23333 344 355533 222222
Q ss_pred HHHHHHHHHhCCCC
Q psy12825 326 RFRVLLAQKLGLSP 339 (488)
Q Consensus 326 R~~~~lA~~Lgv~p 339 (488)
++...+.+.++.+.
T Consensus 166 ~l~~~~~~~~~~~~ 179 (183)
T 3c85_A 166 GFARHVCKQLEPQF 179 (183)
T ss_dssp HHHHHHHHHHCCCC
T ss_pred HHHHHHHHhcCCcc
Confidence 34444455555444
No 133
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=97.28 E-value=0.0002 Score=69.07 Aligned_cols=66 Identities=17% Similarity=0.220 Sum_probs=50.0
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
+++||+|||+|.||..++..|...+. +|.++|+++++++.....+. +..++++ +.++++|+||++.
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~g----------~~~~~~~~~~~~~~D~Vi~~v 68 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQTPH--ELIISGSSLERSKEIAEQLA----------LPYAMSHQDLIDQVDLVILGI 68 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTSSC--EEEEECSSHHHHHHHHHHHT----------CCBCSSHHHHHHTCSEEEECS
T ss_pred CccEEEEECCCHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHHcC----------CEeeCCHHHHHhcCCEEEEEe
Confidence 45799999999999999999887774 89999999987765433321 1123466 4578999999996
No 134
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.27 E-value=0.00074 Score=67.22 Aligned_cols=63 Identities=16% Similarity=0.235 Sum_probs=43.8
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
.||++||.|.||..+|..|+..|+ +|+.||+++++.+. +.+. ......++ +.++++|+||++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~--~V~v~dr~~~~~~~----l~~~-------G~~~~~s~~e~~~~~dvvi~~l 69 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGY--ELVVWNRTASKAEP----LTKL-------GATVVENAIDAITPGGIVFSVL 69 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC--EEEEC-------CT----TTTT-------TCEECSSGGGGCCTTCEEEECC
T ss_pred CcEEEEecHHHHHHHHHHHHHCCC--eEEEEeCCHHHHHH----HHHc-------CCeEeCCHHHHHhcCCceeeec
Confidence 489999999999999999999998 99999999876542 2111 12334565 6789999999985
No 135
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.24 E-value=0.0021 Score=57.09 Aligned_cols=72 Identities=18% Similarity=0.235 Sum_probs=48.6
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CC---c-c-ccCC
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SD---I-A-MSEG 245 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td---~-e-al~d 245 (488)
+....++|+|+|+|.+|..++..|...+. +|+++|.++++++. +... ....+... ++ + + .+.+
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~--~V~vid~~~~~~~~----~~~~----~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH--SVVVVDKNEYAFHR----LNSE----FSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCGGGGGG----SCTT----CCSEEEESCTTSHHHHHTTTGGG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHH----HHhc----CCCcEEEecCCCHHHHHHcCccc
Confidence 34456799999999999999999988886 89999999876542 1100 01122211 12 1 2 2788
Q ss_pred CcEEEEecc
Q psy12825 246 SRIVIITAG 254 (488)
Q Consensus 246 ADiVIitag 254 (488)
+|+||++.+
T Consensus 85 ad~Vi~~~~ 93 (155)
T 2g1u_A 85 ADMVFAFTN 93 (155)
T ss_dssp CSEEEECSS
T ss_pred CCEEEEEeC
Confidence 999999964
No 136
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.18 E-value=0.00058 Score=59.45 Aligned_cols=68 Identities=18% Similarity=0.216 Sum_probs=48.4
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc---c--ccCCCcE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI---A--MSEGSRI 248 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~---e--al~dADi 248 (488)
++++|.|+|+|.+|..++..|...|. +++++|.++++++..... . ..+... ++. + .+.++|+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~--~V~~id~~~~~~~~~~~~---~------~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK--KVLAVDKSKEKIELLEDE---G------FDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHT---T------CEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHC---C------CcEEECCCCCHHHHHhCCcccCCE
Confidence 35689999999999999999998887 899999999876643211 1 122211 222 1 3679999
Q ss_pred EEEecc
Q psy12825 249 VIITAG 254 (488)
Q Consensus 249 VIitag 254 (488)
||++.+
T Consensus 74 vi~~~~ 79 (141)
T 3llv_A 74 VLITGS 79 (141)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 999863
No 137
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=97.17 E-value=0.00089 Score=68.16 Aligned_cols=90 Identities=11% Similarity=0.242 Sum_probs=60.9
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-ccc----CCCcEEEE
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMS----EGSRIVII 251 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal----~dADiVIi 251 (488)
.+||+|||+|.||.+++..|...|. +|+++|++++.++.. .++ . . ..+.++ +.+ ++||+||+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~--~V~~~dr~~~~~~~a-~~~--G------~--~~~~~~~e~~~~a~~~aDlVil 74 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANH--SVFGYNRSRSGAKSA-VDE--G------F--DVSADLEATLQRAAAEDALIVL 74 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTC--CEEEECSCHHHHHHH-HHT--T------C--CEESCHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHH-HHc--C------C--eeeCCHHHHHHhcccCCCEEEE
Confidence 4689999999999999999998886 899999998866532 221 1 1 123454 334 35799999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
++. ...+.++.+.+..+.|+++++.++.
T Consensus 75 avP----------------~~~~~~vl~~l~~~~~~~iv~Dv~S 102 (341)
T 3ktd_A 75 AVP----------------MTAIDSLLDAVHTHAPNNGFTDVVS 102 (341)
T ss_dssp CSC----------------HHHHHHHHHHHHHHCTTCCEEECCS
T ss_pred eCC----------------HHHHHHHHHHHHccCCCCEEEEcCC
Confidence 962 1233444455555567776666653
No 138
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.17 E-value=0.0013 Score=65.30 Aligned_cols=77 Identities=16% Similarity=0.291 Sum_probs=55.3
Q ss_pred CceEEEEe-cccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccc
Q psy12825 177 DQKITVVG-AGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 177 ~~KIaIIG-AG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~ 255 (488)
++||+||| +|.||..++..|...|. +|.++|++++. +..+++++||+||+++..
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~--~V~~~~~~~~~-----------------------~~~~~~~~aDvVilavp~ 75 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGY--PISILDREDWA-----------------------VAESILANADVVIVSVPI 75 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC--CEEEECTTCGG-----------------------GHHHHHTTCSEEEECSCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCC--eEEEEECCccc-----------------------CHHHHhcCCCEEEEeCCH
Confidence 35899999 99999999999998887 89999987641 112467899999999721
Q ss_pred ccCCCcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEe
Q psy12825 256 RSLVGETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIIS 294 (488)
Q Consensus 256 ~~k~G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~T 294 (488)
. .+.++.+.+..+ .|+.+|+.++
T Consensus 76 ~----------------~~~~vl~~l~~~l~~~~iv~~~~ 99 (298)
T 2pv7_A 76 N----------------LTLETIERLKPYLTENMLLADLT 99 (298)
T ss_dssp G----------------GHHHHHHHHGGGCCTTSEEEECC
T ss_pred H----------------HHHHHHHHHHhhcCCCcEEEECC
Confidence 1 145555666665 4566555543
No 139
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.15 E-value=0.002 Score=55.36 Aligned_cols=68 Identities=16% Similarity=0.273 Sum_probs=46.6
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----c-ccCCCcE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----A-MSEGSRI 248 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----e-al~dADi 248 (488)
++++|.|+|+|.+|..++..|...+. +++++|.++++++. +.+. ...+... ++. + .+.++|+
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~--~v~~~d~~~~~~~~----~~~~-----~~~~~~~d~~~~~~l~~~~~~~~d~ 73 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGH--EVLAVDINEEKVNA----YASY-----ATHAVIANATEENELLSLGIRNFEY 73 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC--CCEEEESCHHHHHT----TTTT-----CSEEEECCTTCHHHHHTTTGGGCSE
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHH----HHHh-----CCEEEEeCCCCHHHHHhcCCCCCCE
Confidence 45689999999999999999988886 79999998865542 2111 1122211 122 2 2678999
Q ss_pred EEEecc
Q psy12825 249 VIITAG 254 (488)
Q Consensus 249 VIitag 254 (488)
||++.+
T Consensus 74 vi~~~~ 79 (144)
T 2hmt_A 74 VIVAIG 79 (144)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999974
No 140
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.10 E-value=0.00072 Score=59.25 Aligned_cols=110 Identities=18% Similarity=0.212 Sum_probs=68.4
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc-----cccCCCcEE
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI-----AMSEGSRIV 249 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~-----eal~dADiV 249 (488)
..+|.|+|+|.+|..++..|...+. +++++|.++++++... +. ...+... ++. ..+.+||+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~~~----~~-----g~~~i~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI--PLVVIETSRTRVDELR----ER-----GVRAVLGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHH----HT-----TCEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHH----Hc-----CCCEEECCCCCHHHHHhcCcccCCEE
Confidence 3589999999999999999998887 8999999998776432 11 1122221 222 136799999
Q ss_pred EEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEE
Q psy12825 250 IITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVI 316 (488)
Q Consensus 250 Iitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rVi 316 (488)
|++.+.. ..|.. ++..+++.+|+..+|.-.|-.+- ...+.+ .|. ..|+
T Consensus 76 i~~~~~~-----------~~n~~----~~~~a~~~~~~~~iiar~~~~~~-~~~l~~-~G~--d~vi 123 (140)
T 3fwz_A 76 ILTIPNG-----------YEAGE----IVASARAKNPDIEIIARAHYDDE-VAYITE-RGA--NQVV 123 (140)
T ss_dssp EECCSCH-----------HHHHH----HHHHHHHHCSSSEEEEEESSHHH-HHHHHH-TTC--SEEE
T ss_pred EEECCCh-----------HHHHH----HHHHHHHHCCCCeEEEEECCHHH-HHHHHH-CCC--CEEE
Confidence 9985311 12322 34455666777766665553332 233443 444 3555
No 141
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.10 E-value=0.00026 Score=71.76 Aligned_cols=42 Identities=26% Similarity=0.431 Sum_probs=35.2
Q ss_pred CCCcEEEEecchhHHHHHHHHHhhhhHHHHHHHH---HHHHhhhC
Q psy12825 129 PDQKITVVGAGQVGMACTYSILTQTMARDAVSTV---DRLLSQVA 170 (488)
Q Consensus 129 ~~~ki~vvg~g~vg~~~a~~~~~k~la~eivlid---~~~~~e~~ 170 (488)
...||+|||+|+||+++||+++.+++++|++++| +++.++.+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~ 52 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAI 52 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHh
Confidence 3469999999999999999999999999999988 34544433
No 142
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=97.04 E-value=0.011 Score=58.16 Aligned_cols=116 Identities=14% Similarity=0.043 Sum_probs=75.4
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---c----cccCC
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---I----AMSEG 245 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~----eal~d 245 (488)
.++.++|.|+|| |.+|++++..|+..|. +|+++|++.+..+.....+.+.. .....+....| . +.+++
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~ 83 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGY--KVRGTARSASKLANLQKRWDAKY--PGRFETAVVEDMLKQGAYDEVIKG 83 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHS--TTTEEEEECSCTTSTTTTTTTTTT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCcccHHHHHHHhhccC--CCceEEEEecCCcChHHHHHHHcC
Confidence 345689999999 9999999999999886 89999998876654433332211 01111111222 2 34678
Q ss_pred CcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 246 SRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 246 ADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+|+||.+++.... .....+.+..|+.-...+.+.+.+...-..+|++|
T Consensus 84 ~d~vih~A~~~~~-~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~S 131 (342)
T 1y1p_A 84 AAGVAHIASVVSF-SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS 131 (342)
T ss_dssp CSEEEECCCCCSC-CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEEC
T ss_pred CCEEEEeCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 9999999875432 23445567788888888888876433224455554
No 143
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.00 E-value=0.007 Score=53.42 Aligned_cols=129 Identities=15% Similarity=0.162 Sum_probs=73.7
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCC-hhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----c-ccCCC
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSN-EDRCKGEMLDLQHGAPFLRSPKIESG--SDI----A-MSEGS 246 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~-~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----e-al~dA 246 (488)
|+..||.|+|+|.+|..++..|...+. +++++|.+ +++++.....+.+ ...+... +|. + .+.+|
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g~--~V~vid~~~~~~~~~~~~~~~~------~~~~i~gd~~~~~~l~~a~i~~a 72 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRGQ--NVTVISNLPEDDIKQLEQRLGD------NADVIPGDSNDSSVLKKAGIDRC 72 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHCT------TCEEEESCTTSHHHHHHHTTTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC--CEEEEECCChHHHHHHHHhhcC------CCeEEEcCCCCHHHHHHcChhhC
Confidence 356789999999999999999988886 89999997 4555433222211 1122221 222 2 48999
Q ss_pred cEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEE-eCCchhHHHHHHHhcCCCCCcEEeecCChHHH
Q psy12825 247 RIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLII-SNPVDVLTYISWKLSGFPKNRVIGSGTNLDSM 325 (488)
Q Consensus 247 DiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~-TNPvdi~t~~~~k~sg~p~~rViG~gt~lds~ 325 (488)
|+||++.+. + ..|.. ++...++..|+..++.- .||... ..+. ..|. ..++.- ..
T Consensus 73 d~vi~~~~~---------d--~~n~~----~~~~a~~~~~~~~ii~~~~~~~~~--~~l~-~~G~--~~vi~p-----~~ 127 (153)
T 1id1_A 73 RAILALSDN---------D--ADNAF----VVLSAKDMSSDVKTVLAVSDSKNL--NKIK-MVHP--DIILSP-----QL 127 (153)
T ss_dssp SEEEECSSC---------H--HHHHH----HHHHHHHHTSSSCEEEECSSGGGH--HHHH-TTCC--SEEECH-----HH
T ss_pred CEEEEecCC---------h--HHHHH----HHHHHHHHCCCCEEEEEECCHHHH--HHHH-HcCC--CEEEcH-----HH
Confidence 999998531 1 12322 23344445566555554 455542 2233 3344 456522 22
Q ss_pred HHHHHHHHHhC
Q psy12825 326 RFRVLLAQKLG 336 (488)
Q Consensus 326 R~~~~lA~~Lg 336 (488)
-....+++.+.
T Consensus 128 ~~~~~l~~~~~ 138 (153)
T 1id1_A 128 FGSEILARVLN 138 (153)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 33455666653
No 144
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=97.00 E-value=0.0016 Score=65.90 Aligned_cols=65 Identities=15% Similarity=0.268 Sum_probs=47.9
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
+.+||+|||+|.||.+++..|...+. +|+++|.+++.....+.+. ... .+ ++ +++++||+||+++
T Consensus 15 ~~~~I~IIG~G~mG~alA~~L~~~G~--~V~~~~~~~~~~~~~a~~~--------G~~--~~-~~~e~~~~aDvVilav 80 (338)
T 1np3_A 15 QGKKVAIIGYGSQGHAHACNLKDSGV--DVTVGLRSGSATVAKAEAH--------GLK--VA-DVKTAVAAADVVMILT 80 (338)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHTTC--CEEEECCTTCHHHHHHHHT--------TCE--EE-CHHHHHHTCSEEEECS
T ss_pred cCCEEEEECchHHHHHHHHHHHHCcC--EEEEEECChHHHHHHHHHC--------CCE--Ec-cHHHHHhcCCEEEEeC
Confidence 45789999999999999999998886 7999999876432222211 112 23 55 5688999999996
No 145
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.98 E-value=0.0012 Score=54.72 Aligned_cols=69 Identities=20% Similarity=0.125 Sum_probs=49.0
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CC---c-cccCCCcEE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SD---I-AMSEGSRIV 249 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td---~-eal~dADiV 249 (488)
.++||+|+|+|.+|..++..|...+. .+|+++|+++++++... +. ...+... ++ . +.++++|+|
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~-~~v~~~~r~~~~~~~~~----~~-----~~~~~~~d~~~~~~~~~~~~~~d~v 73 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSN-YSVTVADHDLAALAVLN----RM-----GVATKQVDAKDEAGLAKALGGFDAV 73 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSS-EEEEEEESCHHHHHHHH----TT-----TCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHH----hC-----CCcEEEecCCCHHHHHHHHcCCCEE
Confidence 35799999999999999999998872 38999999988776432 11 1122111 12 1 357899999
Q ss_pred EEecc
Q psy12825 250 IITAG 254 (488)
Q Consensus 250 Iitag 254 (488)
|.+++
T Consensus 74 i~~~~ 78 (118)
T 3ic5_A 74 ISAAP 78 (118)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 99974
No 146
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=96.97 E-value=0.0027 Score=61.15 Aligned_cols=61 Identities=10% Similarity=0.152 Sum_probs=45.8
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeC--ChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDS--NEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di--~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
|||+|||+|.||..++..|+..+. +|+++|+ +++.++. +...- +. +++ +.+++||+||++.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~--~V~~~~~~~~~~~~~~----~~~~g-------~~--~~~~~~~~~aDvvi~~v 64 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGV--EVVTSLEGRSPSTIER----ARTVG-------VT--ETSEEDVYSCPVVISAV 64 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC--EEEECCTTCCHHHHHH----HHHHT-------CE--ECCHHHHHTSSEEEECS
T ss_pred CeEEEEechHHHHHHHHHHHHCCC--eEEEeCCccCHHHHHH----HHHCC-------Cc--CCHHHHHhcCCEEEEEC
Confidence 589999999999999999998886 8999988 5554443 22211 11 345 5578999999996
No 147
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.95 E-value=0.002 Score=67.15 Aligned_cols=95 Identities=13% Similarity=0.229 Sum_probs=64.4
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----c-ccCCCcE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----A-MSEGSRI 248 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----e-al~dADi 248 (488)
..++|.|+|+|.+|..++..|...+. +++++|.|+++++... +.. ..+... ++. + .+.+||+
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~--~vvvId~d~~~v~~~~----~~g-----~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGV--KMVVLDHDPDHIETLR----KFG-----MKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEECCHHHHHHHH----HTT-----CCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHH----hCC-----CeEEEcCCCCHHHHHhcCCCccCE
Confidence 34689999999999999999998887 8999999998776432 210 122221 232 2 3889999
Q ss_pred EEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 249 VIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 249 VIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
||++.+ +-..-..++..+++.+|+..||.-++-
T Consensus 72 viv~~~---------------~~~~n~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 72 LINAID---------------DPQTNLQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp EEECCS---------------SHHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred EEECCC---------------ChHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 999863 122334456666777888666665543
No 148
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.91 E-value=0.00098 Score=62.62 Aligned_cols=66 Identities=20% Similarity=0.340 Sum_probs=48.5
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc-----cccCCCcEEE
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI-----AMSEGSRIVI 250 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~-----eal~dADiVI 250 (488)
|||.|+|+|.+|..++..|...+. +++++|.++++++....... ..+... ++. ..+++||+||
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~l~~~~~--------~~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKY--GVVIINKDRELCEEFAKKLK--------ATIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHHSS--------SEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHcC--------CeEEEcCCCCHHHHHhcCcccCCEEE
Confidence 689999999999999999998887 89999999987764332211 122221 221 2488999999
Q ss_pred Eec
Q psy12825 251 ITA 253 (488)
Q Consensus 251 ita 253 (488)
++.
T Consensus 71 ~~~ 73 (218)
T 3l4b_C 71 ILT 73 (218)
T ss_dssp ECC
T ss_pred Eec
Confidence 985
No 149
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.91 E-value=0.0017 Score=59.87 Aligned_cols=96 Identities=20% Similarity=0.271 Sum_probs=67.5
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-----cccCCCcEEEE
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-----AMSEGSRIVII 251 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-----eal~dADiVIi 251 (488)
|||.|+|| |.+|..++..|+..|. +|++++++++.+... .. ...+. ..|+ +++.++|+||.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~----~~------~~~~~-~~D~~d~~~~~~~~~d~vi~ 67 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH--EVTAIVRNAGKITQT----HK------DINIL-QKDIFDLTLSDLSDQNVVVD 67 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCSHHHHHH----CS------SSEEE-ECCGGGCCHHHHTTCSEEEE
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC--EEEEEEcCchhhhhc----cC------CCeEE-eccccChhhhhhcCCCEEEE
Confidence 58999998 9999999999999986 999999988765432 11 11222 1232 46899999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+++.+... ...|+...+.+.+.+.+... ..+|++|
T Consensus 68 ~ag~~~~~-------~~~~~~~~~~l~~a~~~~~~-~~~v~~S 102 (221)
T 3ew7_A 68 AYGISPDE-------AEKHVTSLDHLISVLNGTVS-PRLLVVG 102 (221)
T ss_dssp CCCSSTTT-------TTSHHHHHHHHHHHHCSCCS-SEEEEEC
T ss_pred CCcCCccc-------cchHHHHHHHHHHHHHhcCC-ceEEEEe
Confidence 98764321 33477777888888877643 3455554
No 150
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.90 E-value=0.0014 Score=60.83 Aligned_cols=98 Identities=15% Similarity=0.124 Sum_probs=68.3
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-----cccCCCcEEEE
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-----AMSEGSRIVII 251 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-----eal~dADiVIi 251 (488)
|||.|+|| |.+|..++..|+..|. +|++++++++.+.. +.. ....+. ..|+ +++.++|+||.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~----~~~-----~~~~~~-~~D~~d~~~~~~~~~d~vi~ 68 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGH--EVLAVVRDPQKAAD----RLG-----ATVATL-VKEPLVLTEADLDSVDAVVD 68 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHH----HTC-----TTSEEE-ECCGGGCCHHHHTTCSEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCC--EEEEEEeccccccc----ccC-----CCceEE-ecccccccHhhcccCCEEEE
Confidence 58999999 9999999999999986 99999998876542 211 112222 2232 46889999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+++....+. ....|+...+.+.+.+.+.. ..+|++|
T Consensus 69 ~ag~~~~~~-----~~~~n~~~~~~l~~a~~~~~--~~~v~~S 104 (224)
T 3h2s_A 69 ALSVPWGSG-----RGYLHLDFATHLVSLLRNSD--TLAVFIL 104 (224)
T ss_dssp CCCCCTTSS-----CTHHHHHHHHHHHHTCTTCC--CEEEEEC
T ss_pred CCccCCCcc-----hhhHHHHHHHHHHHHHHHcC--CcEEEEe
Confidence 987652221 12457777788888887766 4455554
No 151
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=96.88 E-value=0.00032 Score=68.74 Aligned_cols=63 Identities=11% Similarity=0.165 Sum_probs=40.3
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeE-EEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc-ccCCCcEEEEec
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNF-CLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA-MSEGSRIVIITA 253 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el-~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e-al~dADiVIita 253 (488)
++||+|||+|.||..++..|+.. . +| .++|+++++++.....+. . .++|++ .++++|+||++.
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-~--~v~~v~~~~~~~~~~~~~~~g--------~---~~~~~~~~~~~~DvVilav 66 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-Y--EIGYILSRSIDRARNLAEVYG--------G---KAATLEKHPELNGVVFVIV 66 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-------CCCEECSSHHHHHHHHHHTC--------C---CCCSSCCCCC---CEEECS
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-C--cEEEEEeCCHHHHHHHHHHcC--------C---ccCCHHHHHhcCCEEEEeC
Confidence 36899999999999999888766 4 77 599999887765432221 1 234564 578999999996
No 152
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=96.80 E-value=0.0017 Score=64.99 Aligned_cols=69 Identities=12% Similarity=0.230 Sum_probs=52.6
Q ss_pred CCceEEEEecccchHHHHHHHHHc-CCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQ-GIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~-~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
..++|+|||+|.+|..++..|+.. + ..+|.++|+++++++....++.. ++....++ +++++||+||++.
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g-~~~V~v~dr~~~~~~~l~~~~~~--------~~~~~~~~~e~v~~aDiVi~at 204 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFS-FKEVRIWNRTKENAEKFADTVQG--------EVRVCSSVQEAVAGADVIITVT 204 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCC-CSEEEEECSSHHHHHHHHHHSSS--------CCEECSSHHHHHTTCSEEEECC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCC-CcEEEEEcCCHHHHHHHHHHhhC--------CeEEeCCHHHHHhcCCEEEEEe
Confidence 356899999999999999988775 5 35899999999887765443321 23445566 5689999999986
No 153
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=96.79 E-value=0.0031 Score=64.30 Aligned_cols=75 Identities=12% Similarity=0.150 Sum_probs=56.1
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEecc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAG 254 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag 254 (488)
..++|+|||+|.+|..++..+.......+|.++|+++++++..+.++... ....+....++ +++++||+||++..
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~----~g~~~~~~~~~~eav~~aDiVi~aTp 203 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEY----SGLTIRRASSVAEAVKGVDIITTVTA 203 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTC----TTCEEEECSSHHHHHTTCSEEEECCC
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhc----cCceEEEeCCHHHHHhcCCEEEEecc
Confidence 34689999999999998887765333468999999999988877666431 12235555676 57899999999863
No 154
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=95.68 E-value=0.00029 Score=66.20 Aligned_cols=67 Identities=13% Similarity=0.203 Sum_probs=47.4
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEe
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIIT 252 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIit 252 (488)
+....+||+|||+|.||..++..|...+. +|.++|++++ .+. +... .+..++..+.++++|+||++
T Consensus 15 ~~~~~~~I~iIG~G~mG~~la~~L~~~G~--~V~~~~r~~~-~~~----~~~~-------g~~~~~~~~~~~~aDvVila 80 (201)
T 2yjz_A 15 SSEKQGVVCIFGTGDFGKSLGLKMLQCGY--SVVFGSRNPQ-VSS----LLPR-------GAEVLCYSEAASRSDVIVLA 80 (201)
Confidence 33566799999999999999999987775 7899998765 322 1110 12223223568899999999
Q ss_pred c
Q psy12825 253 A 253 (488)
Q Consensus 253 a 253 (488)
.
T Consensus 81 v 81 (201)
T 2yjz_A 81 V 81 (201)
Confidence 6
No 155
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.64 E-value=0.0021 Score=63.07 Aligned_cols=70 Identities=17% Similarity=0.311 Sum_probs=52.4
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
.+.++|+|||+|.+|..++..|...+. +|.++|++.++++.. .+.. .+....++ +.++++|+||++.
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g~--~V~v~~r~~~~~~~l----~~~~------g~~~~~~~~~~~~~aDiVi~at 194 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEGA--KVFLWNRTKEKAIKL----AQKF------PLEVVNSPEEVIDKVQVIVNTT 194 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHTC--EEEEECSSHHHHHHH----TTTS------CEEECSCGGGTGGGCSEEEECS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcCC--EEEEEECCHHHHHHH----HHHc------CCeeehhHHhhhcCCCEEEEeC
Confidence 345799999999999999999998886 899999998766543 2211 13333355 5688999999997
Q ss_pred ccc
Q psy12825 254 GVR 256 (488)
Q Consensus 254 g~~ 256 (488)
..+
T Consensus 195 p~~ 197 (275)
T 2hk9_A 195 SVG 197 (275)
T ss_dssp STT
T ss_pred CCC
Confidence 533
No 156
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.55 E-value=0.0053 Score=61.03 Aligned_cols=127 Identities=13% Similarity=0.141 Sum_probs=77.5
Q ss_pred ecchhHHHHH-HHH-HhhhhHHHHHHHHHHHH-hhhCCC--CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCC
Q psy12825 137 GAGQVGMACT-YSI-LTQTMARDAVSTVDRLL-SQVAPS--IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSN 211 (488)
Q Consensus 137 g~g~vg~~~a-~~~-~~k~la~eivlid~~~~-~e~~~~--~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~ 211 (488)
-.|.-+-+.| |++ ++-.+++.+...++... ++.... .....++|+|||.|.||..+|..+...|. +|..||++
T Consensus 77 ~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~--~V~~~dr~ 154 (290)
T 3gvx_A 77 NAGAYSISVAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAFGM--RVIAYTRS 154 (290)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEECSS
T ss_pred cCCcceeeHHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhhCc--EEEEEecc
Confidence 3344444444 333 22457777777765532 222111 34567899999999999999999887777 99999997
Q ss_pred hhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEE
Q psy12825 212 EDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCIL 290 (488)
Q Consensus 212 ~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~v 290 (488)
.+..+. +....++ +.+++||+|+++..... .++. ++ | .+.+....|.+++
T Consensus 155 ~~~~~~----------------~~~~~~l~ell~~aDiV~l~~P~t~---~t~~-li--~-------~~~l~~mk~gail 205 (290)
T 3gvx_A 155 SVDQNV----------------DVISESPADLFRQSDFVLIAIPLTD---KTRG-MV--N-------SRLLANARKNLTI 205 (290)
T ss_dssp CCCTTC----------------SEECSSHHHHHHHCSEEEECCCCCT---TTTT-CB--S-------HHHHTTCCTTCEE
T ss_pred cccccc----------------ccccCChHHHhhccCeEEEEeeccc---cchh-hh--h-------HHHHhhhhcCceE
Confidence 643211 1233455 46889999999963211 1111 11 1 1224445688999
Q ss_pred EEEe
Q psy12825 291 LIIS 294 (488)
Q Consensus 291 Iv~T 294 (488)
|+++
T Consensus 206 IN~a 209 (290)
T 3gvx_A 206 VNVA 209 (290)
T ss_dssp EECS
T ss_pred EEee
Confidence 8887
No 157
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.54 E-value=0.00033 Score=71.44 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=34.9
Q ss_pred CCcEEEEec-chhHHHHHHHHHhhhhHHHHHHHH---HHHHhhhCC
Q psy12825 130 DQKITVVGA-GQVGMACTYSILTQTMARDAVSTV---DRLLSQVAP 171 (488)
Q Consensus 130 ~~ki~vvg~-g~vg~~~a~~~~~k~la~eivlid---~~~~~e~~~ 171 (488)
..||+|||+ |+||+++||+++.+++++|++++| +++.++.++
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~D 53 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEE 53 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHh
Confidence 469999998 999999999999999999999988 344444333
No 158
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=96.51 E-value=0.0098 Score=59.93 Aligned_cols=89 Identities=12% Similarity=0.212 Sum_probs=59.9
Q ss_pred hhhHHHHHHHHHHHH-hhhCC-C------CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHh
Q psy12825 152 QTMARDAVSTVDRLL-SQVAP-S------IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQ 223 (488)
Q Consensus 152 k~la~eivlid~~~~-~e~~~-~------~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~ 223 (488)
-.+++.+...+.... ++... . .....++|+|||+|.||..++..+...|. +|+.+|++.++.+.. .
T Consensus 122 L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~----~ 195 (330)
T 2gcg_A 122 LTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGV--QRFLYTGRQPRPEEA----A 195 (330)
T ss_dssp HHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGGGTC--CEEEEESSSCCHHHH----H
T ss_pred HHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCC--EEEEECCCCcchhHH----H
Confidence 357777777665432 22211 0 34567899999999999999999887776 899999977544321 1
Q ss_pred hcCCCCCCCcEEEcCCc-cccCCCcEEEEecc
Q psy12825 224 HGAPFLRSPKIESGSDI-AMSEGSRIVIITAG 254 (488)
Q Consensus 224 ~~~~~~~~~~v~~ttd~-eal~dADiVIitag 254 (488)
.. .+... ++ +.+++||+|+++..
T Consensus 196 ~~-------g~~~~-~l~e~l~~aDvVi~~vp 219 (330)
T 2gcg_A 196 EF-------QAEFV-STPELAAQSDFIVVACS 219 (330)
T ss_dssp TT-------TCEEC-CHHHHHHHCSEEEECCC
T ss_pred hc-------CceeC-CHHHHHhhCCEEEEeCC
Confidence 11 12233 55 45889999999973
No 159
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=96.49 E-value=0.0094 Score=60.55 Aligned_cols=113 Identities=12% Similarity=0.148 Sum_probs=68.7
Q ss_pred hhhHHHHHHHHHHH-HhhhCC------CCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhh
Q psy12825 152 QTMARDAVSTVDRL-LSQVAP------SIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQH 224 (488)
Q Consensus 152 k~la~eivlid~~~-~~e~~~------~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~ 224 (488)
-.+++.+...+... .++... ......++|+|||.|.||..+|..+...|. +|..+|++++..
T Consensus 139 L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~G~--~V~~~dr~~~~~--------- 207 (340)
T 4dgs_A 139 LAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAFGM--SVRYWNRSTLSG--------- 207 (340)
T ss_dssp HHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSCCTT---------
T ss_pred HHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCcccc---------
Confidence 35777777776443 222111 134567899999999999999998876666 899999976531
Q ss_pred cCCCCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 225 GAPFLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 225 ~~~~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
. ......++ +.+++||+|+++.... . .+..++. .+.+....|++++|+++.
T Consensus 208 -~------~~~~~~sl~ell~~aDvVil~vP~t----~-------~t~~li~--~~~l~~mk~gailIN~aR 259 (340)
T 4dgs_A 208 -V------DWIAHQSPVDLARDSDVLAVCVAAS----A-------ATQNIVD--ASLLQALGPEGIVVNVAR 259 (340)
T ss_dssp -S------CCEECSSHHHHHHTCSEEEECC---------------------C--HHHHHHTTTTCEEEECSC
T ss_pred -c------CceecCCHHHHHhcCCEEEEeCCCC----H-------HHHHHhh--HHHHhcCCCCCEEEECCC
Confidence 0 11223455 5689999999986211 0 1111220 122334457888888874
No 160
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.48 E-value=0.0077 Score=55.94 Aligned_cols=99 Identities=21% Similarity=0.365 Sum_probs=67.3
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc-------cccCCCc
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI-------AMSEGSR 247 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~-------eal~dAD 247 (488)
++||.|+|| |.+|..++..|+..+. +|++++++++.+... . ..+. ...|+ ++++++|
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----------~--~~~~~~~~Dl~d~~~~~~~~~~~d 69 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGF--EVTAVVRHPEKIKIE----------N--EHLKVKKADVSSLDEVCEVCKGAD 69 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTC--EEEEECSCGGGCCCC----------C--TTEEEECCCTTCHHHHHHHHTTCS
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEEcCcccchhc----------c--CceEEEEecCCCHHHHHHHhcCCC
Confidence 579999998 9999999999999886 999999987654211 0 1222 12232 3588999
Q ss_pred EEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 248 IVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 248 iVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+||.+++... ...+++..|+...+.+.+.+.+..... +|++|
T Consensus 70 ~vi~~a~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S 111 (227)
T 3dhn_A 70 AVISAFNPGW----NNPDIYDETIKVYLTIIDGVKKAGVNR-FLMVG 111 (227)
T ss_dssp EEEECCCC----------CCSHHHHHHHHHHHHHHHTTCSE-EEEEC
T ss_pred EEEEeCcCCC----CChhHHHHHHHHHHHHHHHHHHhCCCE-EEEeC
Confidence 9999986432 122356678888888888888765443 55544
No 161
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.48 E-value=0.013 Score=54.32 Aligned_cols=92 Identities=16% Similarity=0.253 Sum_probs=60.4
Q ss_pred eEEEEec-ccchHHHHHHHH-HcCCCCeEEEEeCChh-HHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCCCcEE
Q psy12825 179 KITVVGA-GQVGMACTYSIL-TQGIYSNFCLIDSNED-RCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEGSRIV 249 (488)
Q Consensus 179 KIaIIGA-G~vG~~ia~~La-~~~l~~el~L~Di~~e-~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~dADiV 249 (488)
+|.|+|| |.+|..++..|+ ..|. +|++++++++ +++... .. .....+... +|. ++++++|+|
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~--~V~~~~r~~~~~~~~~~----~~---~~~~~~~~~D~~d~~~~~~~~~~~d~v 77 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDM--HITLYGRQLKTRIPPEI----ID---HERVTVIEGSFQNPGXLEQAVTNAEVV 77 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCC--EEEEEESSHHHHSCHHH----HT---STTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCc--eEEEEecCccccchhhc----cC---CCceEEEECCCCCHHHHHHHHcCCCEE
Confidence 4999998 999999999999 7787 8999999887 554322 11 011122211 122 357899999
Q ss_pred EEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 250 IITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 250 Iitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
|.+++.. |+. .+.+.+.+.+..... +|++|
T Consensus 78 v~~ag~~-------------n~~-~~~~~~~~~~~~~~~-iv~iS 107 (221)
T 3r6d_A 78 FVGAMES-------------GSD-MASIVKALSRXNIRR-VIGVS 107 (221)
T ss_dssp EESCCCC-------------HHH-HHHHHHHHHHTTCCE-EEEEE
T ss_pred EEcCCCC-------------Chh-HHHHHHHHHhcCCCe-EEEEe
Confidence 9998632 334 667777777654443 55554
No 162
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=96.46 E-value=0.012 Score=59.76 Aligned_cols=68 Identities=13% Similarity=0.187 Sum_probs=49.6
Q ss_pred CCCCCceEEEEecccchHHHHHHHH-HcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEE
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSIL-TQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVI 250 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La-~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVI 250 (488)
.....++|+|||.|.||..++..+. ..|. +|+.+|++.+..+. ..++ .+....++ +.+++||+|+
T Consensus 159 ~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~--~V~~~d~~~~~~~~-~~~~----------g~~~~~~l~ell~~aDvVi 225 (348)
T 2w2k_A 159 HNPRGHVLGAVGLGAIQKEIARKAVHGLGM--KLVYYDVAPADAET-EKAL----------GAERVDSLEELARRSDCVS 225 (348)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSCCCHHH-HHHH----------TCEECSSHHHHHHHCSEEE
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHhcCC--EEEEECCCCcchhh-Hhhc----------CcEEeCCHHHHhccCCEEE
Confidence 3556789999999999999999987 6665 89999998754432 1111 11223455 4588999999
Q ss_pred Eec
Q psy12825 251 ITA 253 (488)
Q Consensus 251 ita 253 (488)
++.
T Consensus 226 l~v 228 (348)
T 2w2k_A 226 VSV 228 (348)
T ss_dssp ECC
T ss_pred EeC
Confidence 996
No 163
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.46 E-value=0.012 Score=58.42 Aligned_cols=104 Identities=20% Similarity=0.187 Sum_probs=68.8
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCC
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEG 245 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~d 245 (488)
+..+.++|.|+|| |.+|++++..|+..|. +|+.+|++++. . ...+... +|. +.+++
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~---------~------~~~~~~~Dl~d~~~~~~~~~~ 77 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGR--TVRGFDLRPSG---------T------GGEEVVGSLEDGQALSDAIMG 77 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTC--CEEEEESSCCS---------S------CCSEEESCTTCHHHHHHHHTT
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCC--EEEEEeCCCCC---------C------CccEEecCcCCHHHHHHHHhC
Confidence 4456789999999 9999999999999986 89999987653 1 1122211 122 35789
Q ss_pred CcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 246 SRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 246 ADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+|+||.+++..........+.+..|+.-...+.+.+.+..... +|++|
T Consensus 78 ~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~V~~S 125 (347)
T 4id9_A 78 VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRR-FVFAS 125 (347)
T ss_dssp CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSE-EEEEE
T ss_pred CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCe-EEEEC
Confidence 9999999875433323335667788888888888887765444 44444
No 164
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=96.41 E-value=0.0072 Score=60.77 Aligned_cols=72 Identities=10% Similarity=-0.014 Sum_probs=55.2
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEecc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAG 254 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag 254 (488)
..++|+|||+|.+|..++..|.......+|.++|+++++++..+.++.... ..+. ..++ +++ ++|+||++..
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~-----~~~~-~~~~~e~v-~aDvVi~aTp 196 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG-----ISAS-VQPAEEAS-RCDVLVTTTP 196 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT-----CCEE-ECCHHHHT-SSSEEEECCC
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcC-----ceEE-ECCHHHHh-CCCEEEEeeC
Confidence 346899999999999998888764335689999999999988777775421 2344 5566 568 9999999863
No 165
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=96.39 E-value=0.016 Score=57.92 Aligned_cols=116 Identities=14% Similarity=0.115 Sum_probs=71.9
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHH--cCCCCeEEEEeCChhHHHHHHHHHhhcC---CC-CCCCcEEEcCCc------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILT--QGIYSNFCLIDSNEDRCKGEMLDLQHGA---PF-LRSPKIESGSDI------ 240 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~--~~l~~el~L~Di~~e~l~g~~~dL~~~~---~~-~~~~~v~~ttd~------ 240 (488)
.+++++|.|+|| |.+|+.++..|+. .|. +|+++|++............... .. .....+. ..|.
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~ 83 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKA--KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVI-AADINNPLDL 83 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTS--EEEEEECCCCC-------CCCCCCGGGGTTCCSEEE-ECCTTCHHHH
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCC--eEEEEECCCccccccccchhhhhhhhhccccCceEE-ECCCCCHHHH
Confidence 356789999998 9999999999999 666 89999986542111100110000 00 0111222 2332
Q ss_pred -cc-cCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 241 -AM-SEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 241 -ea-l~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+. ..++|+||.+++..........+.+..|+.-...+.+.+.+.... +|++|
T Consensus 84 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~--~V~~S 137 (362)
T 3sxp_A 84 RRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK--VIYAS 137 (362)
T ss_dssp HHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE--EEEEE
T ss_pred HHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc--EEEeC
Confidence 12 679999999998544333445666788888888888888776543 55554
No 166
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=96.37 E-value=0.0045 Score=65.90 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=67.8
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccc
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~ 255 (488)
+|||.|+|| |.+|+.++..|+..|. +|+.++++....+. .. ... . ....+++.++|+||.+++.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~--~V~~l~R~~~~~~~-------v~-~d~-~----~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH--EVIQLVRKEPKPGK-------RF-WDP-L----NPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSSCCTTC-------EE-CCT-T----SCCTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCCCccc-------ee-ecc-c----chhHHhcCCCCEEEECCCC
Confidence 789999998 9999999999999987 89999997654211 00 000 0 1123578999999999875
Q ss_pred ccCC---CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 256 RSLV---GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 256 ~~k~---G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
.... .....+++..|+.-.+.+++.+.+...-..+|++|
T Consensus 212 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~S 253 (516)
T 3oh8_A 212 PIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISAS 253 (516)
T ss_dssp -----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEE
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 4221 12344566778888888888744433223455554
No 167
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.36 E-value=0.0044 Score=63.92 Aligned_cols=118 Identities=19% Similarity=0.321 Sum_probs=77.8
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCC----hhH----HHHHHHHHhhcCCCCCCCcEEEcCCc-cccC
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSN----EDR----CKGEMLDLQHGAPFLRSPKIESGSDI-AMSE 244 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~----~e~----l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~ 244 (488)
..+..||+|+|||.+|..++..|...|. .+|+++|++ .++ +......+.+... . .....++ ++++
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~-~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~--~---~~~~~~L~eav~ 262 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGV-KNVVAVDRKGILNENDPETCLNEYHLEIARITN--P---ERLSGDLETALE 262 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTC-CEEEEEETTEECCTTSGGGCSSHHHHHHHHTSC--T---TCCCSCHHHHHT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCC-CeEEEEECCCcccCCCcccccCHHHHHHHHhhh--c---cCchhhHHHHHc
Confidence 5567899999999999999999988774 689999997 655 4334444444321 1 0112345 6899
Q ss_pred CCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCc-hhHHHHHHHhcCCCCCcEEeec
Q psy12825 245 GSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV-DVLTYISWKLSGFPKNRVIGSG 319 (488)
Q Consensus 245 dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPv-di~t~~~~k~sg~p~~rViG~g 319 (488)
+||++|=+.+ | +. +-+++.+.|+ ++.+|+=.+||. .+..+-++++ | ..||++|
T Consensus 263 ~ADVlIG~Sa-p---~l-----------~t~emVk~Ma---~~pIIfalSNPt~E~~p~~a~~~-g---~~i~atG 316 (388)
T 1vl6_A 263 GADFFIGVSR-G---NI-----------LKPEWIKKMS---RKPVIFALANPVPEIDPELAREA-G---AFIVATG 316 (388)
T ss_dssp TCSEEEECSC-S---SC-----------SCHHHHTTSC---SSCEEEECCSSSCSSCHHHHHHT-T---CSEEEES
T ss_pred cCCEEEEeCC-C---Cc-----------cCHHHHHhcC---CCCEEEEcCCCCCCCCHHHHHHh-c---CeEEEeC
Confidence 9999887753 2 22 1133333333 566788889996 4666666664 2 3688887
No 168
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.35 E-value=0.015 Score=56.81 Aligned_cols=74 Identities=14% Similarity=0.197 Sum_probs=55.4
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcccc--CCCcEEEEe
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMS--EGSRIVIIT 252 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal--~dADiVIit 252 (488)
.+.++|.|+|+|.+|..++..|+..|. +|+++|++.++++..+.++... ..+.. .+++++ .++|+||.+
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~--~V~v~~R~~~~~~~la~~~~~~------~~~~~-~~~~~~~~~~~DivVn~ 187 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDC--AVTITNRTVSRAEELAKLFAHT------GSIQA-LSMDELEGHEFDLIINA 187 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHHTGGG------SSEEE-CCSGGGTTCCCSEEEEC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHhhcc------CCeeE-ecHHHhccCCCCEEEEC
Confidence 456799999999999999999999883 8999999998887766665431 02222 344444 489999999
Q ss_pred ccccc
Q psy12825 253 AGVRS 257 (488)
Q Consensus 253 ag~~~ 257 (488)
++.+.
T Consensus 188 t~~~~ 192 (271)
T 1nyt_A 188 TSSGI 192 (271)
T ss_dssp CSCGG
T ss_pred CCCCC
Confidence 87543
No 169
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.33 E-value=0.016 Score=57.02 Aligned_cols=145 Identities=19% Similarity=0.241 Sum_probs=87.1
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
.+.+++.|+|||..+.++++.|+..+. .+|.+++++.++++..+..+..... .+....+.+.++++|+||.+..
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~-~~i~i~nRt~~ra~~la~~~~~~~~-----~~~~~~~~~~~~~~dliiNaTp 196 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGI-ASITLCDPSTARMGAVCELLGNGFP-----GLTVSTQFSGLEDFDLVANASP 196 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHHCT-----TCEEESCCSCSTTCSEEEECSS
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCC-CeEEEeCCCHHHHHHHHHHHhccCC-----cceehhhhhhhhcccccccCCc
Confidence 456789999999999999999988875 5899999999999888777765421 1223345567899999999854
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEE-EeCCch-hHHHHHHHhcCCCCCcEEeecCChHHHHHHHHHH
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLI-ISNPVD-VLTYISWKLSGFPKNRVIGSGTNLDSMRFRVLLA 332 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv-~TNPvd-i~t~~~~k~sg~p~~rViG~gt~lds~R~~~~lA 332 (488)
..-.+.. + .+-. . ..+....|+.++.= +-||.. .+-..++ ..|.+ -+=|++ +|- ..+ ..+.
T Consensus 197 ~Gm~~~~---~-~p~~----~---~~~~~l~~~~~v~D~vY~P~~T~ll~~A~-~~G~~--~~~Gl~-MLv-~Qa-~~f~ 259 (269)
T 3tum_A 197 VGMGTRA---E-LPLS----A---ALLATLQPDTLVADVVTSPEITPLLNRAR-QVGCR--IQTGPE-MAF-AQL-GHLG 259 (269)
T ss_dssp TTCSTTC---C-CSSC----H---HHHHTCCTTSEEEECCCSSSSCHHHHHHH-HHTCE--EECHHH-HHH-HHH-HHHH
T ss_pred cccCCCC---C-CCCC----h---HHHhccCCCcEEEEEccCCCCCHHHHHHH-HCcCE--EECcHH-HHH-HHH-HHHH
Confidence 3221110 0 0000 0 11234456666632 246754 3333333 33552 233552 232 233 3566
Q ss_pred HHhCCCCCCc
Q psy12825 333 QKLGLSPESV 342 (488)
Q Consensus 333 ~~Lgv~p~~V 342 (488)
.+.|+.|-+|
T Consensus 260 lwtG~~P~ev 269 (269)
T 3tum_A 260 AFMGVTPLEI 269 (269)
T ss_dssp HHHTSSCCC-
T ss_pred HHHCCCCCCC
Confidence 7788888764
No 170
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.32 E-value=0.013 Score=56.46 Aligned_cols=101 Identities=10% Similarity=0.145 Sum_probs=65.1
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCC-Cc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEG-SR 247 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~d-AD 247 (488)
|+++||.|+|+|.+|+.++..|+..|. +|+.++++++.+. ....+... +|. +.+++ +|
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-------------~~~~~~~~Dl~d~~~~~~~~~~~~d 65 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQGH--EVTGLRRSAQPMP-------------AGVQTLIADVTRPDTLASIVHLRPE 65 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTC--CEEEEECTTSCCC-------------TTCCEEECCTTCGGGCTTGGGGCCS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCccccc-------------cCCceEEccCCChHHHHHhhcCCCC
Confidence 456899999999999999999999886 8999998765421 11122211 122 24556 99
Q ss_pred EEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 248 IVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 248 iVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+||.+++... ....+.+..|+...+.+.+.+.+..... +|++|
T Consensus 66 ~vih~a~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~~~~-~v~~S 108 (286)
T 3gpi_A 66 ILVYCVAASE---YSDEHYRLSYVEGLRNTLSALEGAPLQH-VFFVS 108 (286)
T ss_dssp EEEECHHHHH---HC-----CCSHHHHHHHHHHTTTSCCCE-EEEEE
T ss_pred EEEEeCCCCC---CCHHHHHHHHHHHHHHHHHHHhhCCCCE-EEEEc
Confidence 9999986432 1223445678888888888887654443 44444
No 171
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.32 E-value=0.005 Score=59.63 Aligned_cols=74 Identities=19% Similarity=0.312 Sum_probs=54.8
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCCh-------------------hHHHHHHHHHhhcCCCCCCCcEEE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNE-------------------DRCKGEMLDLQHGAPFLRSPKIES 236 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~-------------------e~l~g~~~dL~~~~~~~~~~~v~~ 236 (488)
+..||+|||+|.+|+.++..|+..|. .+|.|+|.+. .+++..+..+.+.. +..++..
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv-~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n---p~~~v~~ 105 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGV-GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN---PHIAITP 105 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC---TTSEEEE
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCC-CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC---CCcEEEE
Confidence 34699999999999999999999886 5899999987 67777777776642 1234432
Q ss_pred -cCCc------cccCCCcEEEEec
Q psy12825 237 -GSDI------AMSEGSRIVIITA 253 (488)
Q Consensus 237 -ttd~------eal~dADiVIita 253 (488)
..++ +.++++|+||.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~DvVi~~~ 129 (249)
T 1jw9_B 106 VNALLDDAELAALIAEHDLVLDCT 129 (249)
T ss_dssp ECSCCCHHHHHHHHHTSSEEEECC
T ss_pred EeccCCHhHHHHHHhCCCEEEEeC
Confidence 1111 2467999999985
No 172
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.29 E-value=0.0067 Score=56.29 Aligned_cols=98 Identities=17% Similarity=0.148 Sum_probs=65.3
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CC-c----cccCCCcEE
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SD-I----AMSEGSRIV 249 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td-~----eal~dADiV 249 (488)
|||.|+|| |.+|..++..|+..|. +|++++++++.++.. ....+... +| . ++++++|+|
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~~~d~v 67 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDY--QIYAGARKVEQVPQY-----------NNVKAVHFDVDWTPEEMAKQLHGMDAI 67 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSC--EEEEEESSGGGSCCC-----------TTEEEEECCTTSCHHHHHTTTTTCSEE
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCccchhhc-----------CCceEEEecccCCHHHHHHHHcCCCEE
Confidence 58999998 9999999999998886 999999987644311 01111111 23 2 468899999
Q ss_pred EEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 250 IITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 250 Iitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
|.+++.... +.+..|+.-...+.+.+.+.... .+|++|-
T Consensus 68 i~~ag~~~~------~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS 106 (219)
T 3dqp_A 68 INVSGSGGK------SLLKVDLYGAVKLMQAAEKAEVK-RFILLST 106 (219)
T ss_dssp EECCCCTTS------SCCCCCCHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred EECCcCCCC------CcEeEeHHHHHHHHHHHHHhCCC-EEEEECc
Confidence 999875532 23455666666677777665433 4555553
No 173
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=96.29 E-value=0.029 Score=54.16 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=73.7
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---cc-------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---AM------- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---ea------- 242 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++.+.++....++.... ...++. ...|. ++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~ 104 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSAG---YPGTLIPYRCDLSNEEDILSMFSA 104 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT---CSSEEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHHHhcC---CCceEEEEEecCCCHHHHHHHHHH
Confidence 45678999998 9999999999999986 89999999888776666665421 112222 22332 21
Q ss_pred ----cCCCcEEEEecccccCC---Ccc---hHhhHhhhHHH----HHHHHHHHhccCC-CcEEEEEe
Q psy12825 243 ----SEGSRIVIITAGVRSLV---GET---RLQLVDRNVKI----FKDLIPKIAKGSP-DCILLIIS 294 (488)
Q Consensus 243 ----l~dADiVIitag~~~k~---G~~---r~dll~~N~~i----i~ei~~~I~~~~p-~a~vIv~T 294 (488)
+.+.|+||.+++..... ..+ ....+..|+.- .+.+.+.+.+... .+.||+++
T Consensus 105 ~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~is 171 (279)
T 1xg5_A 105 IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININ 171 (279)
T ss_dssp HHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEEC
T ss_pred HHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEc
Confidence 23799999999864321 112 22334555543 6667777766543 35677665
No 174
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=96.25 E-value=0.0091 Score=57.81 Aligned_cols=68 Identities=15% Similarity=0.282 Sum_probs=51.0
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
.+. +|+|||+|.+|..++..|...+. +|.++|++.++++..+.++.. . ..++++++++|+||++..
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~--~v~v~~r~~~~~~~l~~~~~~--------~---~~~~~~~~~~Divi~~tp 180 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGL--EVWVWNRTPQRALALAEEFGL--------R---AVPLEKAREARLLVNATR 180 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHHTC--------E---ECCGGGGGGCSEEEECSS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhcc--------c---hhhHhhccCCCEEEEccC
Confidence 456 99999999999999999988886 899999998877655443321 1 235532389999999975
Q ss_pred cc
Q psy12825 255 VR 256 (488)
Q Consensus 255 ~~ 256 (488)
.+
T Consensus 181 ~~ 182 (263)
T 2d5c_A 181 VG 182 (263)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 175
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.23 E-value=0.011 Score=57.73 Aligned_cols=73 Identities=18% Similarity=0.210 Sum_probs=54.8
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcccc-C-CCcEEEEe
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMS-E-GSRIVIIT 252 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal-~-dADiVIit 252 (488)
.+.++|.|+|+|.+|.+++..|+..| .+|+++|++.++++..+.++... . .+.. .+++++ + ++|+||.+
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G--~~v~v~~R~~~~a~~l~~~~~~~---~---~~~~-~~~~~~~~~~~DivIn~ 187 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ--QNIVLANRTFSKTKELAERFQPY---G---NIQA-VSMDSIPLQTYDLVINA 187 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT--CEEEEEESSHHHHHHHHHHHGGG---S---CEEE-EEGGGCCCSCCSEEEEC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHcccc---C---CeEE-eeHHHhccCCCCEEEEC
Confidence 45679999999999999999999888 49999999998888776666431 0 2222 234555 3 89999999
Q ss_pred cccc
Q psy12825 253 AGVR 256 (488)
Q Consensus 253 ag~~ 256 (488)
.+.+
T Consensus 188 t~~~ 191 (272)
T 1p77_A 188 TSAG 191 (272)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 7654
No 176
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.21 E-value=0.0088 Score=59.14 Aligned_cols=78 Identities=18% Similarity=0.286 Sum_probs=58.2
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcC--Cc-cccCCCcEEE
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS--DI-AMSEGSRIVI 250 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~tt--d~-eal~dADiVI 250 (488)
..+.+++.|+|+|.+|.+++..|+..|. .+|.++|++.++++..+.++.... ...++.... +. +.+.++|+||
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~-~~v~i~~R~~~~a~~la~~~~~~~---~~~~i~~~~~~~l~~~l~~~DiVI 199 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGV-QKLQVADLDTSRAQALADVINNAV---GREAVVGVDARGIEDVIAAADGVV 199 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSSHHHHHHHHHHHHHHH---TSCCEEEECSTTHHHHHHHSSEEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHhhc---CCceEEEcCHHHHHHHHhcCCEEE
Confidence 3456799999999999999999998775 479999999999888777776431 122343332 44 4578999999
Q ss_pred Eeccc
Q psy12825 251 ITAGV 255 (488)
Q Consensus 251 itag~ 255 (488)
.+...
T Consensus 200 naTp~ 204 (283)
T 3jyo_A 200 NATPM 204 (283)
T ss_dssp ECSST
T ss_pred ECCCC
Confidence 98643
No 177
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.18 E-value=0.0094 Score=58.63 Aligned_cols=65 Identities=14% Similarity=0.081 Sum_probs=51.2
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~ 255 (488)
.++|.|+|+|.+|.++++.|+..| .+|.+++++.++++..+ ++. .... +++++.++|+||.+...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G--~~v~V~nRt~~ka~~la-~~~--------~~~~---~~~~l~~~DiVInaTp~ 182 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG--LQVSVLNRSSRGLDFFQ-RLG--------CDCF---MEPPKSAFDLIINATSA 182 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCTTHHHHH-HHT--------CEEE---SSCCSSCCSEEEECCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH-HCC--------CeEe---cHHHhccCCEEEEcccC
Confidence 579999999999999999999888 59999999999887766 443 1111 34556699999998643
No 178
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.18 E-value=0.016 Score=52.52 Aligned_cols=101 Identities=17% Similarity=0.269 Sum_probs=64.6
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCCCcEE
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEGSRIV 249 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~dADiV 249 (488)
.+||.|+|| |.+|..++..|+..+. +|++++++++.+.. .. .....+... +|+ +.++++|+|
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-------~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v 71 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSRLPS-------EG--PRPAHVVVGDVLQAADVDKTVAGQDAV 71 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCGGGSCS-------SS--CCCSEEEESCTTSHHHHHHHHTTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeChhhccc-------cc--CCceEEEEecCCCHHHHHHHHcCCCEE
Confidence 479999999 9999999999999885 99999998764321 00 111222221 122 358899999
Q ss_pred EEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 250 IITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 250 Iitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
|.+++..... +....|......+.+.+.+.... .+|++|
T Consensus 72 i~~a~~~~~~-----~~~~~n~~~~~~~~~~~~~~~~~-~~v~~S 110 (206)
T 1hdo_A 72 IVLLGTRNDL-----SPTTVMSEGARNIVAAMKAHGVD-KVVACT 110 (206)
T ss_dssp EECCCCTTCC-----SCCCHHHHHHHHHHHHHHHHTCC-EEEEEC
T ss_pred EECccCCCCC-----CccchHHHHHHHHHHHHHHhCCC-eEEEEe
Confidence 9998754321 11124566667777777665433 345444
No 179
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.18 E-value=0.007 Score=59.57 Aligned_cols=80 Identities=13% Similarity=0.192 Sum_probs=56.2
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
.+.+++.|+|+|.+|.+++..|+..| +|+++|++.++++..+.++...........+..+.-.+.+.++|+||.+++
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G---~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN---NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP 202 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS---EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC---CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCC
Confidence 45678999999999999999998877 899999999888777766643210000001222211367889999999987
Q ss_pred ccc
Q psy12825 255 VRS 257 (488)
Q Consensus 255 ~~~ 257 (488)
.+.
T Consensus 203 ~~~ 205 (287)
T 1nvt_A 203 IGM 205 (287)
T ss_dssp TTC
T ss_pred CCC
Confidence 654
No 180
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.16 E-value=0.0078 Score=58.89 Aligned_cols=105 Identities=16% Similarity=0.155 Sum_probs=68.6
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEecc
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAG 254 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag 254 (488)
++||.|+|| |.+|+.++..|+..|. +|+.++++++... +.... .....+. ..++ ++++++|+||.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-----~~~~~--~~~~Dl~-~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN--TPIILTRSIGNKA-----INDYE--YRVSDYT-LEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCC----------CCE--EEECCCC-HHHHHHHTTTCSEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC--EEEEEeCCCCccc-----CCceE--EEEcccc-HHHHHHhhcCCCEEEEccc
Confidence 368999998 9999999999999986 8999999744322 11110 0001111 1122 46889999999987
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
..... ...+.+..|+.-.+.+.+.+.+....- +|.+|
T Consensus 72 ~~~~~--~~~~~~~~n~~~~~~ll~a~~~~~~~r-~v~~S 108 (311)
T 3m2p_A 72 TRGSQ--GKISEFHDNEILTQNLYDACYENNISN-IVYAS 108 (311)
T ss_dssp CCCSS--SCGGGTHHHHHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred cCCCC--ChHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEc
Confidence 54332 344556778888888888888776544 44444
No 181
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=96.14 E-value=0.045 Score=52.36 Aligned_cols=115 Identities=8% Similarity=0.092 Sum_probs=73.2
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c-------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A------- 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e------- 241 (488)
.++.+++.|+|+ |.+|.+++..|+..|. +|+++|++++.++....++.... .++. ...|. +
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~ 75 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA--RVVITGRTKEKLEEAKLEIEQFP-----GQILTVQMDVRNTDDIQKMIE 75 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCST-----TCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEEccCCCHHHHHHHHH
Confidence 456678889998 9999999999999987 89999999988887766665321 1222 22232 1
Q ss_pred ----ccCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ----MSEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ----al~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|..... ..+. ...+.-|+. ..+.+.+.+.+....+.||+++-
T Consensus 76 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS 143 (257)
T 3imf_A 76 QIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVA 143 (257)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECc
Confidence 123789999999864321 1121 223445544 34555555544455566777753
No 182
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=96.13 E-value=0.054 Score=53.23 Aligned_cols=115 Identities=13% Similarity=0.196 Sum_probs=74.5
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc----c----
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA----M---- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e----a---- 242 (488)
++.++|.|+|| |.+|..++..|+..|. +|++.|++++.++....++.... ....+ ...| .+ .
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~-~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRGQG---FDAHG-VVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT---CCEEE-EECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC---CceEE-EEccCCCHHHHHHHHHHH
Confidence 45678999999 9999999999999987 89999999998887777776531 11111 1223 21 1
Q ss_pred ---cCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 ---SEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 ---l~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.+.|++|.++|...... .+ -...+.-|+. +.+.+.+.+.+..+.+.||+++-
T Consensus 103 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS 168 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTAS 168 (301)
T ss_dssp HHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 237899999998653211 11 1233444433 45555555666554677777764
No 183
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.12 E-value=0.021 Score=57.27 Aligned_cols=125 Identities=11% Similarity=0.084 Sum_probs=71.9
Q ss_pred CCceEEEEecccchHH-HHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcccc--CCCcEEEEe
Q psy12825 176 PDQKITVVGAGQVGMA-CTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMS--EGSRIVIIT 252 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~-ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal--~dADiVIit 252 (488)
.++||.|||.|.+|.+ +|..|...|. +|..+|.++... ....|.+. ...+....+++.+ .++|+||.+
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~--~V~~~D~~~~~~--~~~~L~~~-----gi~v~~g~~~~~l~~~~~d~vV~S 73 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGF--EVSGCDAKMYPP--MSTQLEAL-----GIDVYEGFDAAQLDEFKADVYVIG 73 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTC--EEEEEESSCCTT--HHHHHHHT-----TCEEEESCCGGGGGSCCCSEEEEC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCC--EEEEEcCCCCcH--HHHHHHhC-----CCEEECCCCHHHcCCCCCCEEEEC
Confidence 3579999999999996 8888888887 899999864311 12234332 2345544556666 489999999
Q ss_pred cccccCCCcchHhhHhhhHHHHHHHHHHHhc-cCCCcEEEEEeCCch------hHHHHHHHhcCCCC
Q psy12825 253 AGVRSLVGETRLQLVDRNVKIFKDLIPKIAK-GSPDCILLIISNPVD------VLTYISWKLSGFPK 312 (488)
Q Consensus 253 ag~~~k~G~~r~dll~~N~~ii~ei~~~I~~-~~p~a~vIv~TNPvd------i~t~~~~k~sg~p~ 312 (488)
.+++... ........++++++.++ +.+.+ ...+..+|-+|-... ++.+++. ..|+++
T Consensus 74 pgi~~~~-p~~~~a~~~gi~v~~~~-e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~-~~g~~~ 137 (326)
T 3eag_A 74 NVAKRGM-DVVEAILNLGLPYISGP-QWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLE-YAGLAP 137 (326)
T ss_dssp TTCCTTC-HHHHHHHHTTCCEEEHH-HHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHH-HTTCCC
T ss_pred CCcCCCC-HHHHHHHHcCCcEEeHH-HHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHH-HcCCCc
Confidence 8776421 11111223444444332 11111 123345677776654 3444443 345554
No 184
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=96.11 E-value=0.0051 Score=62.33 Aligned_cols=83 Identities=8% Similarity=0.178 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHHH-HhhhCC-----CCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcC
Q psy12825 153 TMARDAVSTVDRL-LSQVAP-----SIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGA 226 (488)
Q Consensus 153 ~la~eivlid~~~-~~e~~~-----~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~ 226 (488)
.+++.+...++.. .++... ......++|+|||+|.||..+|..+...|. +|..+|++.+...
T Consensus 134 ~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~--~V~~~dr~~~~~~---------- 201 (333)
T 3ba1_A 134 AVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEAFDC--PISYFSRSKKPNT---------- 201 (333)
T ss_dssp HHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHTTTC--CEEEECSSCCTTC----------
T ss_pred HHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEECCCchhcc----------
Confidence 4777777766443 222211 134567899999999999999999887676 8999999765321
Q ss_pred CCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 227 PFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 227 ~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
.+....++ +.+++||+|+++.
T Consensus 202 ------g~~~~~~l~ell~~aDvVil~v 223 (333)
T 3ba1_A 202 ------NYTYYGSVVELASNSDILVVAC 223 (333)
T ss_dssp ------CSEEESCHHHHHHTCSEEEECS
T ss_pred ------CceecCCHHHHHhcCCEEEEec
Confidence 01223466 4589999999996
No 185
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=96.10 E-value=0.058 Score=51.88 Aligned_cols=115 Identities=10% Similarity=0.138 Sum_probs=74.2
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e-------- 241 (488)
++.++|.|+|+ |.+|..++..|+..|. +|++.|++++.++....++..... .++. ...| .+
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dv~~~~~v~~~~~~ 91 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGA--RLVLSGRDVSELDAARRALGEQFG----TDVHTVAIDLAEPDAPAELARR 91 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHHC----CCEEEEECCTTSTTHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhcC----CcEEEEEecCCCHHHHHHHHHH
Confidence 45577888898 9999999999999987 899999999888877777754210 1121 1223 21
Q ss_pred ---ccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+....+.||+++-
T Consensus 92 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS 158 (266)
T 4egf_A 92 AAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVAS 158 (266)
T ss_dssp HHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcc
Confidence 1237899999998754221 111 223444543 45566666666555667777764
No 186
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.10 E-value=0.0068 Score=60.22 Aligned_cols=77 Identities=16% Similarity=0.167 Sum_probs=55.4
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
.+.++|.|+|+|.+|..++..|+..|. .+|+++|++.++++..+.++.... ..+....+. +.+.++|+||.+.
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~-~~V~v~nR~~~ka~~la~~~~~~~-----~~~~~~~~~~~~~~~aDivIn~t 212 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAA-ERIDMANRTVEKAERLVREGDERR-----SAYFSLAEAETRLAEYDIIINTT 212 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-SEEEEECSSHHHHHHHHHHSCSSS-----CCEECHHHHHHTGGGCSEEEECS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHhhhcc-----CceeeHHHHHhhhccCCEEEECC
Confidence 456799999999999999999988774 489999999988876665543210 022211233 5688999999997
Q ss_pred cccc
Q psy12825 254 GVRS 257 (488)
Q Consensus 254 g~~~ 257 (488)
+.+.
T Consensus 213 ~~~~ 216 (297)
T 2egg_A 213 SVGM 216 (297)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 6543
No 187
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.08 E-value=0.016 Score=57.59 Aligned_cols=117 Identities=11% Similarity=0.087 Sum_probs=72.6
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCC--CCCcEEEc--CCc----cccCC
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFL--RSPKIESG--SDI----AMSEG 245 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~--~~~~v~~t--td~----eal~d 245 (488)
+++++|.|+|| |.+|+.++..|+..|. +|+.+|++.........++....... ....+... +|. +++++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 100 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQ--VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG 100 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC
Confidence 34689999998 9999999999999886 89999985543222333333211000 01122211 122 35889
Q ss_pred CcEEEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 246 SRIVIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 246 ADiVIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+|+||.+++..... .....+.+..|+.-...+.+.+.+..... +|++|
T Consensus 101 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~v~~S 150 (351)
T 3ruf_A 101 VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS-FTYAA 150 (351)
T ss_dssp CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSE-EEEEE
T ss_pred CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEe
Confidence 99999998743211 11234456778888888888888775444 44443
No 188
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=96.06 E-value=0.025 Score=53.62 Aligned_cols=115 Identities=17% Similarity=0.202 Sum_probs=72.4
Q ss_pred CCceEEEEec-ccchHHHHHHHHH-cCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCcc----cc----
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILT-QGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIA----MS---- 243 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~-~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~e----al---- 243 (488)
+.++|.|+|| |.+|..++..|+. .|. +|++++++.+.++....++.... ....+... +|.+ .+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDIDDLQSIRALRDFLR 77 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHhcC---CeeEEEECCCCCHHHHHHHHHHHH
Confidence 4568899998 9999999999999 786 89999999887777666665431 11222211 1221 12
Q ss_pred ---CCCcEEEEecccccCCCc------chHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEeC
Q psy12825 244 ---EGSRIVIITAGVRSLVGE------TRLQLVDRNVKIFKDLIPKIAKGS-PDCILLIISN 295 (488)
Q Consensus 244 ---~dADiVIitag~~~k~G~------~r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~TN 295 (488)
.+.|+||.+++....... .-...+..|+.-...+.+.+.++. +.+.||+++-
T Consensus 78 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 78 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 278999999986532211 122345566665566666665542 2345666654
No 189
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=96.04 E-value=0.041 Score=56.46 Aligned_cols=116 Identities=16% Similarity=0.289 Sum_probs=78.7
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE-cCCc---c------ccC
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES-GSDI---A------MSE 244 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~-ttd~---e------al~ 244 (488)
+.++|.|+|| |.+|+.++..|+..|. .+|+++|++++.+.....++.....+. ...+.. ..|. + +..
T Consensus 34 ~~k~vLVTGatG~IG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~~~ 111 (399)
T 3nzo_A 34 SQSRFLVLGGAGSIGQAVTKEIFKRNP-QKLHVVDISENNMVELVRDIRSSFGYI-NGDFQTFALDIGSIEYDAFIKADG 111 (399)
T ss_dssp HTCEEEEETTTSHHHHHHHHHHHTTCC-SEEEEECSCHHHHHHHHHHHHHHTCCC-SSEEEEECCCTTSHHHHHHHHHCC
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCC-CEEEEEECCcchHHHHHHHHHHhcCCC-CCcEEEEEEeCCCHHHHHHHHHhC
Confidence 4579999998 9999999999998873 389999999988877777776542111 123322 2332 1 236
Q ss_pred CCcEEEEecccccCCCc-ch---HhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 245 GSRIVIITAGVRSLVGE-TR---LQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 245 dADiVIitag~~~k~G~-~r---~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+.|+||.+++....+.. +. .+.+..|+.-...+++.+.++.... ++.+|
T Consensus 112 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r-~V~iS 164 (399)
T 3nzo_A 112 QYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKK-YFCVS 164 (399)
T ss_dssp CCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSE-EEEEC
T ss_pred CCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEe
Confidence 89999999875433211 12 3556778877888888888776544 45554
No 190
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=96.01 E-value=0.054 Score=51.01 Aligned_cols=117 Identities=16% Similarity=0.180 Sum_probs=72.7
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc----CCcc-------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG----SDIA------- 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t----td~e------- 241 (488)
.++.++|.|+|+ |.+|..++..|+..|. +|+++|++++.++....++.... .....+... +|.+
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~d~d~~~~~~~~~~~~ 86 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA--SVVLLGRTEASLAEVSDQIKSAG--QPQPLIIALNLENATAQQYRELAA 86 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--SCCCEEEECCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEecCHHHHHHHHHHHHhcC--CCCceEEEeccccCCHHHHHHHHH
Confidence 446678999998 9999999999999987 89999999998887777776532 112222221 1211
Q ss_pred ----ccCCCcEEEEecccccCCC----cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ----MSEGSRIVIITAGVRSLVG----ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ----al~dADiVIitag~~~k~G----~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|.....+ .+. ...+.-|+. +.+.+.+.+.+. ..+.||+++-
T Consensus 87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS 154 (247)
T 3i1j_A 87 RVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-EDASIAFTSS 154 (247)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSEEEEEECC
T ss_pred HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCeEEEEcc
Confidence 1337899999998642211 111 223444443 445555555543 3456666653
No 191
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=96.01 E-value=0.068 Score=50.83 Aligned_cols=113 Identities=16% Similarity=0.244 Sum_probs=73.1
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc-------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA------- 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e------- 241 (488)
.++.+++.|+|+ |.+|..++..|+..|. +|++.|++++.++....++.. ++. ...| .+
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~Dv~~~~~v~~~~~ 72 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGA--TVIVSDINAEGAKAAAASIGK--------KARAIAADISDPGSVKALFA 72 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHCT--------TEEECCCCTTCHHHHHHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCC--------ceEEEEcCCCCHHHHHHHHH
Confidence 356678999998 9999999999999987 899999999888766655521 111 1112 11
Q ss_pred ----ccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 242 ----MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 242 ----al~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
.+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+..+.+.||+++-.
T Consensus 73 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 141 (247)
T 3rwb_A 73 EIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASN 141 (247)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCT
T ss_pred HHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECch
Confidence 1237899999998653211 121 223444543 445555667666556777777643
No 192
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=96.00 E-value=0.022 Score=56.14 Aligned_cols=113 Identities=13% Similarity=0.227 Sum_probs=72.2
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---c----cccC--C
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---I----AMSE--G 245 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~----eal~--d 245 (488)
.+++|.|+|| |.+|.+++..|+..|. +|+++|++.+.......++.... .....+. ..| . +.++ +
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~-~~Dl~d~~~~~~~~~~~~ 78 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGY--DVVIADNLVNSKREAIARIEKIT--GKTPAFH-ETDVSDERALARIFDAHP 78 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCCSSSCTHHHHHHHHHH--SCCCEEE-CCCTTCHHHHHHHHHHSC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCC--cEEEEecCCcchHHHHHHHHhhc--CCCceEE-EeecCCHHHHHHHHhccC
Confidence 4579999998 9999999999999987 89999986654443334443221 0111221 223 2 2344 8
Q ss_pred CcEEEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 246 SRIVIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 246 ADiVIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+|+||.+++..... .....+.+..|+.-...+.+.+.+..... +|++|
T Consensus 79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-iv~~S 128 (341)
T 3enk_A 79 ITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKR-IVFSS 128 (341)
T ss_dssp CCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred CcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCE-EEEEe
Confidence 99999998753211 11233556778888888888888765444 45544
No 193
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=96.00 E-value=0.046 Score=51.75 Aligned_cols=115 Identities=14% Similarity=0.160 Sum_probs=73.4
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... .++. ...|. +
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 79 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGA--AVVVADINAEAAEAVAKQIVADG-----GTAISVAVDVSDPESAKAMADR 79 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-----CEEEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC-----CcEEEEEccCCCHHHHHHHHHH
Confidence 45678899998 9999999999999987 89999999998887777775431 1221 12232 1
Q ss_pred ---ccCCCcEEEEecccc---cC-C--Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeCCc
Q psy12825 242 ---MSEGSRIVIITAGVR---SL-V--GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISNPV 297 (488)
Q Consensus 242 ---al~dADiVIitag~~---~k-~--G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TNPv 297 (488)
.+...|++|..+|.. .. + ..+ -...+..|+.- .+.+.+.+.+.. .+.||+++-..
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~ 150 (253)
T 3qiv_A 80 TLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTA 150 (253)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC--
T ss_pred HHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcc
Confidence 123789999999862 11 1 112 22345556543 556666665543 45677776443
No 194
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=95.99 E-value=0.059 Score=51.48 Aligned_cols=112 Identities=13% Similarity=0.180 Sum_probs=72.1
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc---------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA--------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e--------- 241 (488)
++.++|.|+|+ |.+|.+++..|+..|. +|++.|++.+.++....++... ... ...| .+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~-~~~D~~~~~~v~~~~~~~ 76 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGA--TVAIADIDIERARQAAAEIGPA------AYA-VQMDVTRQDSIDAAIAAT 76 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCTT------EEE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCC------ceE-EEeeCCCHHHHHHHHHHH
Confidence 45578999998 9999999999999987 8999999998887666665321 111 1122 21
Q ss_pred --ccCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+.+.|++|..+|...... .+ -...+..|+. +.+.+.+.+.+..+.+.||+++-
T Consensus 77 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS 142 (259)
T 4e6p_A 77 VEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMAS 142 (259)
T ss_dssp HHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECC
Confidence 1238999999998643211 11 1233445543 45555566655554667777764
No 195
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.98 E-value=0.017 Score=56.87 Aligned_cols=107 Identities=19% Similarity=0.193 Sum_probs=65.5
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCCCcE
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEGSRI 248 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~dADi 248 (488)
++|||.|+|| |.+|++++..|+..|. +|+++|++.+..+. +.+. ...+... +|. ++++++|+
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----l~~~-----~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGH--DLVLIHRPSSQIQR----LAYL-----EPECRVAEMLDHAGLERALRGLDG 80 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECTTSCGGG----GGGG-----CCEEEECCTTCHHHHHHHTTTCSE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEecChHhhhh----hccC-----CeEEEEecCCCHHHHHHHHcCCCE
Confidence 3469999998 9999999999999886 89999997654321 2211 1122211 122 35889999
Q ss_pred EEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 249 VIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 249 VIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
||.+++..........+.+..|+.-...+.+.+.+..... +|++|
T Consensus 81 vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-~v~~S 125 (342)
T 2x4g_A 81 VIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPR-ILYVG 125 (342)
T ss_dssp EEEC------------CHHHHHHHHHHHHHHHHHHHTCSC-EEEEC
T ss_pred EEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCe-EEEEC
Confidence 9999875432122344566778888888888877764333 55554
No 196
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=95.98 E-value=0.012 Score=59.14 Aligned_cols=116 Identities=12% Similarity=0.137 Sum_probs=70.8
Q ss_pred hhhHHHHHHHHHHH-HhhhCCC--CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCC
Q psy12825 152 QTMARDAVSTVDRL-LSQVAPS--IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF 228 (488)
Q Consensus 152 k~la~eivlid~~~-~~e~~~~--~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~ 228 (488)
-.+++.+...+... .++.... .....++|+|||.|.+|..+|..+..-|. +|..||++++..++ +
T Consensus 111 L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~----~------ 178 (315)
T 3pp8_A 111 LHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGF--PLRCWSRSRKSWPG----V------ 178 (315)
T ss_dssp HHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTTTC--CEEEEESSCCCCTT----C------
T ss_pred HHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHCCC--EEEEEcCCchhhhh----h------
Confidence 35778887777543 2222111 34567899999999999999998876665 89999987643211 0
Q ss_pred CCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 229 LRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 229 ~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.......++ +.+++||+|+++.... .+...++ | .+.+....|.+++|+++.
T Consensus 179 ---~~~~~~~~l~ell~~aDiV~l~~Plt----~~t~~li--~-------~~~l~~mk~gailIN~aR 230 (315)
T 3pp8_A 179 ---ESYVGREELRAFLNQTRVLINLLPNT----AQTVGII--N-------SELLDQLPDGAYVLNLAR 230 (315)
T ss_dssp ---EEEESHHHHHHHHHTCSEEEECCCCC----GGGTTCB--S-------HHHHTTSCTTEEEEECSC
T ss_pred ---hhhcccCCHHHHHhhCCEEEEecCCc----hhhhhhc--c-------HHHHhhCCCCCEEEECCC
Confidence 011111344 4688999999986211 0111111 1 123444567899999874
No 197
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=95.97 E-value=0.064 Score=50.45 Aligned_cols=115 Identities=12% Similarity=0.122 Sum_probs=71.4
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c----c--
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A----M-- 242 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e----a-- 242 (488)
.++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++... .++. ...|. + .
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~ 74 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGA--KVMITGRHSDVGEKAAKSVGTP------DQIQFFQHDSSDEDGWTKLFD 74 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCT------TTEEEEECCTTCHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhcc------CceEEEECCCCCHHHHHHHHH
Confidence 356678999998 9999999999999986 8999999988776555554321 1221 12232 1 1
Q ss_pred -----cCCCcEEEEecccccCC---Ccc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 243 -----SEGSRIVIITAGVRSLV---GET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 243 -----l~dADiVIitag~~~k~---G~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
+...|+||.+++..... ..+ ....+..|+. ..+.+.+.+.+......+|+++..
T Consensus 75 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~ 143 (251)
T 1zk4_A 75 ATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI 143 (251)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCc
Confidence 23589999999864321 112 2334555654 445555555554332567776643
No 198
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=95.94 E-value=0.019 Score=56.44 Aligned_cols=73 Identities=14% Similarity=0.244 Sum_probs=54.3
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcccc--CCCcEEEE
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMS--EGSRIVII 251 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal--~dADiVIi 251 (488)
..+.+++.|+|+|.+|.+++..|+..|. .+|++++++.++++..+.++.. ..+... +++++ .++|+||.
T Consensus 117 ~l~~k~~lvlGaGg~~~aia~~L~~~G~-~~v~i~~R~~~~a~~la~~~~~-------~~~~~~-~~~~l~~~~~DivIn 187 (272)
T 3pwz_A 117 PLRNRRVLLLGAGGAVRGALLPFLQAGP-SELVIANRDMAKALALRNELDH-------SRLRIS-RYEALEGQSFDIVVN 187 (272)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHCC-------TTEEEE-CSGGGTTCCCSEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhcc-------CCeeEe-eHHHhcccCCCEEEE
Confidence 3467899999999999999999998774 4899999999988877766643 122221 23333 78999999
Q ss_pred eccc
Q psy12825 252 TAGV 255 (488)
Q Consensus 252 tag~ 255 (488)
+...
T Consensus 188 aTp~ 191 (272)
T 3pwz_A 188 ATSA 191 (272)
T ss_dssp CSSG
T ss_pred CCCC
Confidence 8643
No 199
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.93 E-value=0.0013 Score=66.54 Aligned_cols=34 Identities=29% Similarity=0.487 Sum_probs=31.7
Q ss_pred CCCcEEEEecchhHHHHHHHHHhhhhHHHHHHHH
Q psy12825 129 PDQKITVVGAGQVGMACTYSILTQTMARDAVSTV 162 (488)
Q Consensus 129 ~~~ki~vvg~g~vg~~~a~~~~~k~la~eivlid 162 (488)
++.||+|||+|+||++++|.++.+++.+|++++|
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~D 41 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVD 41 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEe
Confidence 4469999999999999999999999999999988
No 200
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=95.93 E-value=0.079 Score=51.43 Aligned_cols=114 Identities=13% Similarity=0.145 Sum_probs=73.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc----c----
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA----M---- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e----a---- 242 (488)
++.+++.|+|+ |.+|..++..|+..|. +|++.|++++.++....++.... ..... ...| .+ .
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~-~~~Dl~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGA--QVAVAARHSDALQVVADEIAGVG---GKALP-IRCDVTQPDQVRGMLDQM 103 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHTT---CCCEE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---CeEEE-EEcCCCCHHHHHHHHHHH
Confidence 45678999998 9999999999999987 89999999988887777776531 11122 1223 21 1
Q ss_pred ---cCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEe
Q psy12825 243 ---SEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 243 ---l~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+....+.||+++
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~is 168 (276)
T 3r1i_A 104 TGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTA 168 (276)
T ss_dssp HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEC
Confidence 237899999998653221 122 223344543 4555666666554446677765
No 201
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=95.93 E-value=0.014 Score=56.10 Aligned_cols=102 Identities=17% Similarity=0.142 Sum_probs=68.6
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCCCcE
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEGSRI 248 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~dADi 248 (488)
++++|.|+|| |.+|..++..|+..+. +|++.|++++... .....+... +|. +.+++.|+
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~~D~ 67 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE--ILRLADLSPLDPA------------GPNEECVQCDLADANAVNAMVAGCDG 67 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE--EEEEEESSCCCCC------------CTTEEEEECCTTCHHHHHHHHTTCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC--EEEEEecCCcccc------------CCCCEEEEcCCCCHHHHHHHHcCCCE
Confidence 4568999998 9999999999998886 8999999764332 001111111 122 35789999
Q ss_pred EEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 249 VIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 249 VIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
||.+++.... ....+++..|+.-...+.+.+.+..... +|++|
T Consensus 68 vi~~Ag~~~~--~~~~~~~~~N~~g~~~l~~a~~~~~~~~-iv~~S 110 (267)
T 3rft_A 68 IVHLGGISVE--KPFEQILQGNIIGLYNLYEAARAHGQPR-IVFAS 110 (267)
T ss_dssp EEECCSCCSC--CCHHHHHHHHTHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred EEECCCCcCc--CCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEc
Confidence 9999986421 2334566778887778888877765444 55554
No 202
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=95.92 E-value=0.066 Score=51.27 Aligned_cols=114 Identities=18% Similarity=0.143 Sum_probs=72.4
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---cc-------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---AM------- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---ea------- 242 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... ...++. ...|. ++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~~v~~~~~~ 79 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQF---EPQKTLFIQCDVADQQQLRDTFRK 79 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTS---CGGGEEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhc---CCCceEEEecCCCCHHHHHHHHHH
Confidence 34568999998 9999999999999986 89999999887765555554321 011222 22232 11
Q ss_pred ----cCCCcEEEEecccccCCCcchHhhHhhhHH----HHHHHHHHHhccC--CCcEEEEEeC
Q psy12825 243 ----SEGSRIVIITAGVRSLVGETRLQLVDRNVK----IFKDLIPKIAKGS--PDCILLIISN 295 (488)
Q Consensus 243 ----l~dADiVIitag~~~k~G~~r~dll~~N~~----ii~ei~~~I~~~~--p~a~vIv~TN 295 (488)
+...|++|..+|.... ....+.+..|+. ..+.+.+.+.+.. +.+.||+++-
T Consensus 80 ~~~~~g~id~lv~~Ag~~~~--~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS 140 (267)
T 2gdz_A 80 VVDHFGRLDILVNNAGVNNE--KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS 140 (267)
T ss_dssp HHHHHSCCCEEEECCCCCCS--SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCh--hhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence 2357999999986432 223344555544 5566677776543 2466777764
No 203
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.92 E-value=0.09 Score=50.20 Aligned_cols=116 Identities=13% Similarity=0.152 Sum_probs=73.8
Q ss_pred CCCCceEEEEec-c-cchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---cc-----
Q psy12825 174 ESPDQKITVVGA-G-QVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---AM----- 242 (488)
Q Consensus 174 ~~~~~KIaIIGA-G-~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---ea----- 242 (488)
.++.++|.|+|+ | .+|..++..|+..|. +|+++|++.+.++....++.... ..++. ...|. ++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dl~~~~~v~~~~ 92 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGA--DVVISDYHERRLGETRDQLADLG----LGRVEAVVCDVTSTEAVDALI 92 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTC----SSCEEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC----CCceEEEEeCCCCHHHHHHHH
Confidence 345678999999 7 599999999999987 89999999988887777775431 11222 22232 11
Q ss_pred ------cCCCcEEEEecccccCCC---cch---HhhHhhhH----HHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 ------SEGSRIVIITAGVRSLVG---ETR---LQLVDRNV----KIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 ------l~dADiVIitag~~~k~G---~~r---~dll~~N~----~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+...|++|..+|...... .+. ...+..|+ .+.+.+.+.+.+....+.||+++-
T Consensus 93 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 161 (266)
T 3o38_A 93 TQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNAS 161 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECC
T ss_pred HHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 236799999998643221 122 22344443 344555556665545666777653
No 204
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=95.89 E-value=0.11 Score=49.96 Aligned_cols=116 Identities=16% Similarity=0.168 Sum_probs=72.1
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c------
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A------ 241 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e------ 241 (488)
..++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... .++. ...|. +
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dl~~~~~v~~~~ 99 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKS--KLVLWDINKHGLEETAAKCKGLG-----AKVHTFVVDCSNREDIYSSA 99 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEEcCHHHHHHHHHHHHhcC-----CeEEEEEeeCCCHHHHHHHH
Confidence 3456678999998 9999999999999986 89999999887776666665421 1221 12232 1
Q ss_pred -----ccCCCcEEEEecccccCCC---cc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeCC
Q psy12825 242 -----MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 242 -----al~dADiVIitag~~~k~G---~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TNP 296 (488)
.+.+.|+||.++|...... .+ ..+.+..|+.- .+.+.+.+.+. ..+.+|+++-.
T Consensus 100 ~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~ 168 (272)
T 1yb1_A 100 KKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASA 168 (272)
T ss_dssp HHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCC
T ss_pred HHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEech
Confidence 1237899999998653211 11 12334455443 44444444443 34567776643
No 205
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=95.87 E-value=0.069 Score=51.17 Aligned_cols=115 Identities=13% Similarity=0.172 Sum_probs=71.5
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---cc-------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---AM------- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---ea------- 242 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... . ..++. ...|. ++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~-~~~~~~~~~D~~~~~~v~~~~~~ 85 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGA--KLSLVDVSSEGLEASKAAVLETA--P-DAEVLTTVADVSDEAQVEAYVTA 85 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHC--T-TCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc--C-CceEEEEEccCCCHHHHHHHHHH
Confidence 45678999998 9999999999999986 89999999988876666665431 0 11222 22232 21
Q ss_pred ----cCCCcEEEEecccccC--C--Ccc---hHhhHhhhH----HHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 ----SEGSRIVIITAGVRSL--V--GET---RLQLVDRNV----KIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 ----l~dADiVIitag~~~k--~--G~~---r~dll~~N~----~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+...|++|..+|.... + ..+ ....+..|+ ...+.+.+.+.+.. .+.||+++-
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS 152 (267)
T 1iy8_A 86 TTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTAS 152 (267)
T ss_dssp HHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcc
Confidence 2368999999986532 1 111 122344454 24455666665543 355666653
No 206
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.87 E-value=0.052 Score=50.60 Aligned_cols=109 Identities=10% Similarity=0.005 Sum_probs=68.9
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCCCc
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEGSR 247 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~dAD 247 (488)
+++++|.|+|| |.+|..++..|+..+...+|++++++++.++. +.. ...+... +|. +.++++|
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~~~------~~~~~~~D~~d~~~~~~~~~~~d 71 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----IGG------EADVFIGDITDADSINPAFQGID 71 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----TTC------CTTEEECCTTSHHHHHHHHTTCS
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----cCC------CeeEEEecCCCHHHHHHHHcCCC
Confidence 35679999998 99999999999998422389999998765532 211 1122221 232 3578999
Q ss_pred EEEEecccccC------------CCcc---hHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 248 IVIITAGVRSL------------VGET---RLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 248 iVIitag~~~k------------~G~~---r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+||.+++.... +... ..+.+..|+.....+++.+.+.... .+|++|
T Consensus 72 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~S 132 (253)
T 1xq6_A 72 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK-HIVVVG 132 (253)
T ss_dssp EEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCS-EEEEEE
T ss_pred EEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCC-EEEEEc
Confidence 99999875321 1110 0123456777777777777766443 355554
No 207
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=95.86 E-value=0.024 Score=55.99 Aligned_cols=74 Identities=9% Similarity=0.113 Sum_probs=54.9
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcccc-CCCcEEEEe
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMS-EGSRIVIIT 252 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal-~dADiVIit 252 (488)
..+.++|.|+|+|.+|..++..|+..|. .+|.+++++.++++..+.++.... .+... +++++ .++|+||.+
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~-~~v~v~~R~~~~a~~la~~~~~~~------~~~~~-~~~~l~~~aDiIIna 194 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQP-ASITVTNRTFAKAEQLAELVAAYG------EVKAQ-AFEQLKQSYDVIINS 194 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCC-SEEEEEESSHHHHHHHHHHHGGGS------CEEEE-EGGGCCSCEEEEEEC
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCC-CeEEEEECCHHHHHHHHHHhhccC------CeeEe-eHHHhcCCCCEEEEc
Confidence 3466899999999999999999988764 489999999998888777776421 12221 23333 789999998
Q ss_pred ccc
Q psy12825 253 AGV 255 (488)
Q Consensus 253 ag~ 255 (488)
...
T Consensus 195 Tp~ 197 (281)
T 3o8q_A 195 TSA 197 (281)
T ss_dssp SCC
T ss_pred CcC
Confidence 643
No 208
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=95.86 E-value=0.022 Score=57.53 Aligned_cols=88 Identities=18% Similarity=0.229 Sum_probs=59.4
Q ss_pred hhhHHHHHHHHHHHH-hhhCC------C----CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHH
Q psy12825 152 QTMARDAVSTVDRLL-SQVAP------S----IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEML 220 (488)
Q Consensus 152 k~la~eivlid~~~~-~e~~~------~----~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~ 220 (488)
-.+++.+...+.... ++... . .....++|+|||.|.||..++..+...|. +|..+|++.+. + ...
T Consensus 110 L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~--~V~~~d~~~~~-~-~~~ 185 (333)
T 2d0i_A 110 INLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKAIARRLIPFGV--KLYYWSRHRKV-N-VEK 185 (333)
T ss_dssp HHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHHHHHHHHGGGTC--EEEEECSSCCH-H-HHH
T ss_pred HHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHHHHHHHHHHCCC--EEEEECCCcch-h-hhh
Confidence 357788877765432 21211 0 24567899999999999999998877776 89999998764 2 111
Q ss_pred HHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEecc
Q psy12825 221 DLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAG 254 (488)
Q Consensus 221 dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag 254 (488)
+. .+... ++ +.+++||+|++++.
T Consensus 186 ~~----------g~~~~-~l~e~l~~aDiVil~vp 209 (333)
T 2d0i_A 186 EL----------KARYM-DIDELLEKSDIVILALP 209 (333)
T ss_dssp HH----------TEEEC-CHHHHHHHCSEEEECCC
T ss_pred hc----------Cceec-CHHHHHhhCCEEEEcCC
Confidence 11 12222 55 45889999999963
No 209
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=95.84 E-value=0.042 Score=51.77 Aligned_cols=114 Identities=17% Similarity=0.177 Sum_probs=69.9
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc----cc---
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA----MS--- 243 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e----al--- 243 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... ....+ ...| ++ .+
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~-~~~D~~~~~~~~~~~~~~ 82 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLG---GQAFA-CRCDITSEQELSALADFA 82 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHTT---CCEEE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHHhC---CceEE-EEcCCCCHHHHHHHHHHH
Confidence 45678999998 9999999999999886 89999999887776666665421 11111 1223 21 12
Q ss_pred ----CCCcEEEEecccccCC--Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeC
Q psy12825 244 ----EGSRIVIITAGVRSLV--GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 244 ----~dADiVIitag~~~k~--G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+.|+||.+++..... ..+ ....+..|+.- .+.+.+.+.+.. ...+|+++-
T Consensus 83 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS 146 (255)
T 1fmc_A 83 ISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITS 146 (255)
T ss_dssp HHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcc
Confidence 3899999998864321 122 22334455543 344444444433 355666653
No 210
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=95.83 E-value=0.059 Score=52.13 Aligned_cols=116 Identities=21% Similarity=0.290 Sum_probs=72.8
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE-cCCc---c----c---
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES-GSDI---A----M--- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~-ttd~---e----a--- 242 (488)
.+.++|.|+|+ |.+|.+++..|+..|. +|+++|++++.++....++..... ...++.. ..|. + .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGA--SVMIVGRNPDKLAGAVQELEALGA--NGGAIRYEPTDITNEDETARAVDA 84 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTCC--SSCEEEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCC--CCceEEEEeCCCCCHHHHHHHHHH
Confidence 45678999998 9999999999999987 899999999988887777765321 1113322 2232 1 1
Q ss_pred ----cCCCcEEEEecccccCCC----cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 ----SEGSRIVIITAGVRSLVG----ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 ----l~dADiVIitag~~~k~G----~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+...|++|..+|.....+ .+ -...+..|+. +.+...+.+.+. ..+.||+++-
T Consensus 85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS 151 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-GGGSFVGISS 151 (281)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEeC
Confidence 236799999998632211 11 1234455654 344444454433 3566777753
No 211
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=95.83 E-value=0.064 Score=51.35 Aligned_cols=113 Identities=14% Similarity=0.210 Sum_probs=70.0
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++.+.++....++.... .++. ...|. +
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 77 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGT--AIALLDMNREALEKAEASVREKG-----VEARSYVCDVTSEEAVIGTVDS 77 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT-----SCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEEecCCCHHHHHHHHHH
Confidence 45678999998 9999999999999986 89999999888876666665321 1221 12232 1
Q ss_pred ---ccCCCcEEEEecccc-cC-C--Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVR-SL-V--GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~-~k-~--G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|.. .. + ..+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS 144 (262)
T 1zem_A 78 VVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTAS 144 (262)
T ss_dssp HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcc
Confidence 123789999999864 21 1 1111 223444543 3444455554432 356776653
No 212
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=95.83 E-value=0.066 Score=50.63 Aligned_cols=77 Identities=18% Similarity=0.267 Sum_probs=54.1
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc----cc---
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA----MS--- 243 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e----al--- 243 (488)
++.++|.|+|+ |.+|..++..|+..|. +|+++|++.+.++....++.... ....+. ..| .+ .+
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~-~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA--RVIIADLDEAMATKAVEDLRMEG---HDVSSV-VMDVTNTESVQNAVRSV 84 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT---CCEEEE-ECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---CceEEE-EecCCCHHHHHHHHHHH
Confidence 34578999998 9999999999999986 89999999887776666665421 111111 223 22 12
Q ss_pred ----CCCcEEEEeccccc
Q psy12825 244 ----EGSRIVIITAGVRS 257 (488)
Q Consensus 244 ----~dADiVIitag~~~ 257 (488)
.+.|+||.+++...
T Consensus 85 ~~~~~~id~vi~~Ag~~~ 102 (260)
T 3awd_A 85 HEQEGRVDILVACAGICI 102 (260)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 37899999998653
No 213
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=95.83 E-value=0.0078 Score=60.48 Aligned_cols=115 Identities=17% Similarity=0.218 Sum_probs=76.0
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHc-CCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccC
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQ-GIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSE 244 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~-~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~ 244 (488)
..++.++|.|+|| |.+|..++..|+.. |. .+|++++++++.+.....++.. ...++... +|+ ++++
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~-~~V~~~~r~~~~~~~~~~~~~~-----~~v~~~~~Dl~d~~~l~~~~~ 90 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNA-KKIIVYSRDELKQSEMAMEFND-----PRMRFFIGDVRDLERLNYALE 90 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHHCCC-SEEEEEESCHHHHHHHHHHHCC-----TTEEEEECCTTCHHHHHHHTT
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhhCCC-CEEEEEECChhhHHHHHHHhcC-----CCEEEEECCCCCHHHHHHHHh
Confidence 3456789999998 99999999999988 63 3899999998776654444431 11122111 232 3588
Q ss_pred CCcEEEEecccccCCC--cchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 245 GSRIVIITAGVRSLVG--ETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 245 dADiVIitag~~~k~G--~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
++|+||.+++....+. ....+.+..|+.-...+++...+..... +|++|
T Consensus 91 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~-~V~~S 141 (344)
T 2gn4_A 91 GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQ-VIALS 141 (344)
T ss_dssp TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSE-EEEEC
T ss_pred cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCE-EEEec
Confidence 9999999987543211 1234566778887788888877765333 55554
No 214
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.81 E-value=0.0013 Score=66.26 Aligned_cols=32 Identities=31% Similarity=0.524 Sum_probs=30.9
Q ss_pred CcEEEEecchhHHHHHHHHHhhhhHHHHHHHH
Q psy12825 131 QKITVVGAGQVGMACTYSILTQTMARDAVSTV 162 (488)
Q Consensus 131 ~ki~vvg~g~vg~~~a~~~~~k~la~eivlid 162 (488)
.||+|||+|+||.+++|.++.+++.+|++++|
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~D 37 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVD 37 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEe
Confidence 69999999999999999999999999999988
No 215
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=95.81 E-value=0.0073 Score=60.62 Aligned_cols=71 Identities=10% Similarity=0.112 Sum_probs=53.1
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEecc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAG 254 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag 254 (488)
.++|+|||+|.+|...+..|.......+|.++|++ +.+..+.++.+.. ...+... ++ +++++||+||.+..
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~----g~~~~~~-~~~eav~~aDIVi~aT~ 192 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRC----GVPARMA-APADIAAQADIVVTATR 192 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHH----TSCEEEC-CHHHHHHHCSEEEECCC
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhc----CCeEEEe-CHHHHHhhCCEEEEccC
Confidence 46899999999999988888764336799999998 5666666665431 1244555 76 57899999999864
No 216
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=95.81 E-value=0.13 Score=49.47 Aligned_cols=115 Identities=17% Similarity=0.243 Sum_probs=72.4
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCC------------hhHHHHHHHHHhhcCCCCCCCcEE-EcCC
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSN------------EDRCKGEMLDLQHGAPFLRSPKIE-SGSD 239 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~------------~e~l~g~~~dL~~~~~~~~~~~v~-~ttd 239 (488)
.++.+++.|+|+ |.+|.+++..|+..|. +|+++|++ .+.++....++.... .++. ...|
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D 82 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG-----SRIVARQAD 82 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT-----CCEEEEECC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHhcC-----CeEEEEeCC
Confidence 345678999998 9999999999999987 89999987 666665555554431 1222 1223
Q ss_pred ---cc----c-------cCCCcEEEEecccccCCC-c-chHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 240 ---IA----M-------SEGSRIVIITAGVRSLVG-E-TRLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 240 ---~e----a-------l~dADiVIitag~~~k~G-~-~r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+ . +...|++|..+|...... . .-...+..|+. +.+.+.+.+.+....+.||+++-
T Consensus 83 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS 158 (278)
T 3sx2_A 83 VRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS 158 (278)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence 21 1 237899999998653221 1 12233444543 45555666666555677777763
No 217
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.77 E-value=0.0032 Score=59.13 Aligned_cols=107 Identities=18% Similarity=0.209 Sum_probs=68.3
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC------c-cccCCCc
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD------I-AMSEGSR 247 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd------~-eal~dAD 247 (488)
+.++|.|+|| |.+|..++..|+..|...+|+++|++++.++... .. ...+. ..| . +.++++|
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--~~-------~~~~~-~~D~~d~~~~~~~~~~~d 86 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--YK-------NVNQE-VVDFEKLDDYASAFQGHD 86 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--GG-------GCEEE-ECCGGGGGGGGGGGSSCS
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--cC-------CceEE-ecCcCCHHHHHHHhcCCC
Confidence 3578999998 9999999999999886558999999775432110 00 01111 122 2 3578999
Q ss_pred EEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 248 IVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 248 iVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+||.+++.... .....+++..|+.-...+.+.+.+.... .+|++|
T Consensus 87 ~vi~~ag~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~iv~~S 131 (242)
T 2bka_A 87 VGFCCLGTTRG-KAGAEGFVRVDRDYVLKSAELAKAGGCK-HFNLLS 131 (242)
T ss_dssp EEEECCCCCHH-HHHHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred EEEECCCcccc-cCCcccceeeeHHHHHHHHHHHHHCCCC-EEEEEc
Confidence 99999875321 1122345566777667777777665433 455554
No 218
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=95.73 E-value=0.11 Score=50.08 Aligned_cols=115 Identities=15% Similarity=0.174 Sum_probs=73.0
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC-------------ChhHHHHHHHHHhhcCCCCCCCcEE-EcC
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-------------NEDRCKGEMLDLQHGAPFLRSPKIE-SGS 238 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di-------------~~e~l~g~~~dL~~~~~~~~~~~v~-~tt 238 (488)
.++.+++.|+|+ |.+|..++..|+..|. +|+++|+ +++.++....++.... .++. ...
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 84 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA--DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-----RKALTRVL 84 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-----CCEEEEEC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhcC-----CeEEEEEc
Confidence 456678899998 9999999999999987 8999998 6677776666665421 1221 222
Q ss_pred Cc---c-----------ccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEe
Q psy12825 239 DI---A-----------MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 239 d~---e-----------al~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~T 294 (488)
|. + .+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+....+.||+++
T Consensus 85 Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is 164 (280)
T 3pgx_A 85 DVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVS 164 (280)
T ss_dssp CTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEc
Confidence 32 1 1347899999998653211 121 223444543 4566666666655466677776
Q ss_pred C
Q psy12825 295 N 295 (488)
Q Consensus 295 N 295 (488)
-
T Consensus 165 S 165 (280)
T 3pgx_A 165 S 165 (280)
T ss_dssp C
T ss_pred c
Confidence 4
No 219
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=95.73 E-value=0.008 Score=59.34 Aligned_cols=70 Identities=10% Similarity=0.129 Sum_probs=47.3
Q ss_pred CCCCCceEEEEecccchHH-HHHHHHHcCCCCeEE-EEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc-ccCCCcEE
Q psy12825 173 IESPDQKITVVGAGQVGMA-CTYSILTQGIYSNFC-LIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA-MSEGSRIV 249 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~-ia~~La~~~l~~el~-L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e-al~dADiV 249 (488)
+.|+++||+|||+|.+|.. ++..+...+- .+|+ ++|+++++++..+....- . ..+|++ .++++|+|
T Consensus 2 ~~M~~~~igiIG~G~~g~~~~~~~l~~~~~-~~l~av~d~~~~~~~~~a~~~~~--------~--~~~~~~~ll~~~D~V 70 (308)
T 3uuw_A 2 NAMKNIKMGMIGLGSIAQKAYLPILTKSER-FEFVGAFTPNKVKREKICSDYRI--------M--PFDSIESLAKKCDCI 70 (308)
T ss_dssp ---CCCEEEEECCSHHHHHHTHHHHTSCSS-SEEEEEECSCHHHHHHHHHHHTC--------C--BCSCHHHHHTTCSEE
T ss_pred CccccCcEEEEecCHHHHHHHHHHHHhCCC-eEEEEEECCCHHHHHHHHHHcCC--------C--CcCCHHHHHhcCCEE
Confidence 3467789999999999985 6666654332 2555 899999888765544321 1 145774 46699999
Q ss_pred EEec
Q psy12825 250 IITA 253 (488)
Q Consensus 250 Iita 253 (488)
+++.
T Consensus 71 ~i~t 74 (308)
T 3uuw_A 71 FLHS 74 (308)
T ss_dssp EECC
T ss_pred EEeC
Confidence 9985
No 220
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.72 E-value=0.0024 Score=65.09 Aligned_cols=67 Identities=18% Similarity=0.300 Sum_probs=46.4
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE-cCCc----cccCCCcEEE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES-GSDI----AMSEGSRIVI 250 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~-ttd~----eal~dADiVI 250 (488)
+.|||.|+|||.||+.++..|... . +|.+.|++.++++.. .+.. ..+.. .+|. +.++++|+||
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~-~--~v~~~~~~~~~~~~~----~~~~-----~~~~~d~~d~~~l~~~~~~~DvVi 82 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE-F--DVYIGDVNNENLEKV----KEFA-----TPLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-S--EEEEEESCHHHHHHH----TTTS-----EEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CccEEEEECCCHHHHHHHHHHhcC-C--CeEEEEcCHHHHHHH----hccC-----CcEEEecCCHHHHHHHHhCCCEEE
Confidence 567999999999999998887543 3 899999998877643 1111 11211 1233 3579999999
Q ss_pred Eecc
Q psy12825 251 ITAG 254 (488)
Q Consensus 251 itag 254 (488)
.+.+
T Consensus 83 ~~~p 86 (365)
T 3abi_A 83 GALP 86 (365)
T ss_dssp ECCC
T ss_pred EecC
Confidence 9863
No 221
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=95.71 E-value=0.12 Score=48.94 Aligned_cols=112 Identities=15% Similarity=0.251 Sum_probs=71.0
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---ccc-------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IAM------- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~ea------- 242 (488)
++.+++.|+|| |.+|..++..|+..|. +|++.|++.+.++....++.... .++. ...| .++
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~~~~~~~~~~~~ 77 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA--AVAIAARRVEKLRALGDELTAAG-----AKVHVLELDVADRQGVDAAVAS 77 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHHHHH
Confidence 45678999998 9999999999999987 89999999988877666665421 1221 1223 211
Q ss_pred ----cCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 ----SEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 ----l~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.+.|++|..+|..... ..+. ...+..|+. +.+.+.+.+.+.. +.||+++-
T Consensus 78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS 142 (247)
T 2jah_A 78 TVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSS 142 (247)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEcc
Confidence 24789999999865321 1222 223444543 3444555554433 56777763
No 222
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=95.71 E-value=0.097 Score=49.40 Aligned_cols=108 Identities=18% Similarity=0.162 Sum_probs=66.6
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc----------
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA---------- 241 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e---------- 241 (488)
++++|.|+|| |.+|..++..|+..|. +|++.|++++.++....++.... .. ...| .+
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~------~~-~~~D~~~~~~v~~~~~~~~ 72 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGH--QVSMMGRRYQRLQQQELLLGNAV------IG-IVADLAHHEDVDVAFAAAV 72 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGGGE------EE-EECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhcCCc------eE-EECCCCCHHHHHHHHHHHH
Confidence 4567899998 9999999999999987 89999999988877666653211 11 1122 11
Q ss_pred -ccCCCcEEEEecccccCC---Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEe
Q psy12825 242 -MSEGSRIVIITAGVRSLV---GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 242 -al~dADiVIitag~~~k~---G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~T 294 (488)
.+...|++|..+|..... ..+ -...+.-|+.- .+.+.+.+.+.. +.||+++
T Consensus 73 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~is 134 (235)
T 3l6e_A 73 EWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVL 134 (235)
T ss_dssp HHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEEC
T ss_pred HhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEe
Confidence 123679999999874321 112 22345556543 344555554432 3566664
No 223
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=95.70 E-value=0.064 Score=51.05 Aligned_cols=109 Identities=16% Similarity=0.161 Sum_probs=69.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
++.++|.|+|| |.+|..++..|+..|. +|++.|++++.++....++.. ++. ...|. +
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~D~~~~~~v~~~~~~ 73 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGA--KVAFSDINEAAGQQLAAELGE--------RSMFVRHDVSSEADWTLVMAA 73 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHCT--------TEEEECCCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHcCC--------ceEEEEccCCCHHHHHHHHHH
Confidence 45678899998 9999999999999986 899999998877665555411 111 12232 1
Q ss_pred ---ccCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|.++|..... ..+. ...+..|+. ..+.+.+.+.+.. +.||+++-
T Consensus 74 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS 138 (253)
T 1hxh_A 74 VQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMAS 138 (253)
T ss_dssp HHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcc
Confidence 123569999999864321 1122 233455543 4556666666543 66777764
No 224
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=95.70 E-value=0.12 Score=49.95 Aligned_cols=115 Identities=15% Similarity=0.196 Sum_probs=72.1
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCC----------------hhHHHHHHHHHhhcCCCCCCCcEE-
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSN----------------EDRCKGEMLDLQHGAPFLRSPKIE- 235 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~----------------~e~l~g~~~dL~~~~~~~~~~~v~- 235 (488)
..+.+++.|+|+ |.+|..++..|+..|. +|+++|++ .+.++....++.... .++.
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 80 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA--DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-----RRIVT 80 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-----CCEEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-----CceEE
Confidence 345678999998 8999999999999987 89999987 566665555554321 1222
Q ss_pred EcCC---cc-----------ccCCCcEEEEecccccCCC----cch---HhhHhhhHH----HHHHHHHHHhccCCCcEE
Q psy12825 236 SGSD---IA-----------MSEGSRIVIITAGVRSLVG----ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCIL 290 (488)
Q Consensus 236 ~ttd---~e-----------al~dADiVIitag~~~k~G----~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~v 290 (488)
...| ++ .+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+....+.|
T Consensus 81 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~i 160 (286)
T 3uve_A 81 AEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSI 160 (286)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred EEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEE
Confidence 2223 21 1237899999998653321 122 223444543 455566666655555677
Q ss_pred EEEeC
Q psy12825 291 LIISN 295 (488)
Q Consensus 291 Iv~TN 295 (488)
|+++-
T Consensus 161 v~isS 165 (286)
T 3uve_A 161 ILTSS 165 (286)
T ss_dssp EEECC
T ss_pred EEECc
Confidence 77764
No 225
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=95.69 E-value=0.014 Score=59.03 Aligned_cols=66 Identities=14% Similarity=0.226 Sum_probs=49.2
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEe
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIIT 252 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIit 252 (488)
....++|+|||+|.||..++..+...|. +|+.+|++.+. + ...+. . +.. .++ +.+++||+|+++
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~-~-~~~~~--g--------~~~-~~l~~~l~~aDvVil~ 211 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNM--RILYYSRTRKE-E-VEREL--N--------AEF-KPLEDLLRESDFVVLA 211 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCH-H-HHHHH--C--------CEE-CCHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCC--EEEEECCCcch-h-hHhhc--C--------ccc-CCHHHHHhhCCEEEEC
Confidence 4567899999999999999999987776 89999998765 2 11111 0 122 355 458899999999
Q ss_pred cc
Q psy12825 253 AG 254 (488)
Q Consensus 253 ag 254 (488)
..
T Consensus 212 vp 213 (334)
T 2dbq_A 212 VP 213 (334)
T ss_dssp CC
T ss_pred CC
Confidence 73
No 226
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.69 E-value=0.033 Score=53.52 Aligned_cols=68 Identities=12% Similarity=0.117 Sum_probs=49.0
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCccccCCCcEEEEecc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIAMSEGSRIVIITAG 254 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~eal~dADiVIitag 254 (488)
++||.|+|||.+|+.++..|+..|. +|+.++++++...... .. ..++... +|++ ++++|+||.+++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~----~~-----~~~~~~~D~~d~~-~~~~d~vi~~a~ 72 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW--RIIGTSRNPDQMEAIR----AS-----GAEPLLWPGEEPS-LDGVTHLLISTA 72 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC--EEEEEESCGGGHHHHH----HT-----TEEEEESSSSCCC-CTTCCEEEECCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC--EEEEEEcChhhhhhHh----hC-----CCeEEEecccccc-cCCCCEEEECCC
Confidence 4799999999999999999998886 8999999887654321 11 0111111 1234 889999999986
Q ss_pred cc
Q psy12825 255 VR 256 (488)
Q Consensus 255 ~~ 256 (488)
..
T Consensus 73 ~~ 74 (286)
T 3ius_A 73 PD 74 (286)
T ss_dssp CB
T ss_pred cc
Confidence 43
No 227
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=95.69 E-value=0.029 Score=55.62 Aligned_cols=112 Identities=17% Similarity=0.176 Sum_probs=69.3
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc--cccCCCcE
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI--AMSEGSRI 248 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~--eal~dADi 248 (488)
..+++++|.|+|| |.+|+.++..|+..|. +|+++|++...... .+.+.. ...++. ...|. .++.++|+
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~---~~~~~~---~~~~~~~~~~D~~~~~~~~~d~ 94 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGH--EVTVVDNFFTGRKR---NVEHWI---GHENFELINHDVVEPLYIEVDQ 94 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCGG---GTGGGT---TCTTEEEEECCTTSCCCCCCSE
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCC--EEEEEeCCCccchh---hhhhhc---cCCceEEEeCccCChhhcCCCE
Confidence 4456789999999 9999999999999886 89999985431111 111111 011222 22343 46789999
Q ss_pred EEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 249 VIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 249 VIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
||.+++..... .....+.+..|+.-...+.+.+.+... .+|++|
T Consensus 95 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S 140 (343)
T 2b69_A 95 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLAS 140 (343)
T ss_dssp EEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEE
T ss_pred EEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--cEEEEC
Confidence 99998753211 122345567788877888888777653 455554
No 228
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=95.66 E-value=0.0024 Score=65.81 Aligned_cols=43 Identities=14% Similarity=0.097 Sum_probs=34.7
Q ss_pred CCcEEEEe-cchhHHHHHHHHHhhhhHHH---HHHH--H-----HHHHhhhCCC
Q psy12825 130 DQKITVVG-AGQVGMACTYSILTQTMARD---AVST--V-----DRLLSQVAPS 172 (488)
Q Consensus 130 ~~ki~vvg-~g~vg~~~a~~~~~k~la~e---ivli--d-----~~~~~e~~~~ 172 (488)
..||+||| +|+||+++||+|+.+++++| ++++ | +++.++.||.
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL 85 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMEL 85 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhH
Confidence 36999999 79999999999999999998 6552 2 3466766654
No 229
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.65 E-value=0.094 Score=50.29 Aligned_cols=114 Identities=18% Similarity=0.194 Sum_probs=72.4
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
++.+++.|+|+ |.+|.+++..|+..|. +|++.|++++.++....++.... ..++. ...|. +
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA--NVAVAGRSTADIDACVADLDQLG----SGKVIGVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTS----SSCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhC----CCcEEEEEcCCCCHHHHHHHHHH
Confidence 45678888898 9999999999999987 89999999998888777776531 11222 22232 1
Q ss_pred ---ccCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|..... ..+. ...+..|+. +.+.+.+.+.+... +.||+++-
T Consensus 82 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~-g~iv~isS 147 (262)
T 3pk0_A 82 AVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGS-GRVVLTSS 147 (262)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSS-CEEEEECC
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEEec
Confidence 123789999999864321 1222 223444543 44555555554433 45666653
No 230
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=95.64 E-value=0.057 Score=51.68 Aligned_cols=115 Identities=17% Similarity=0.245 Sum_probs=72.3
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---cc------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---AM------ 242 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---ea------ 242 (488)
.++.++|.|+|| |.+|..++..|+..|. +|++.|++++.++....++.... .++. ...|. ++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~ 98 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGA--RVVLTARDVEKLRAVEREIVAAG-----GEAESHACDLSHSDAIAAFAT 98 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-----CEEEEEECCTTCHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhC-----CceeEEEecCCCHHHHHHHHH
Confidence 455678999998 9999999999999987 89999999998887777776431 1222 12232 11
Q ss_pred -----cCCCcEEEEecccccCCC----cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 243 -----SEGSRIVIITAGVRSLVG----ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 243 -----l~dADiVIitag~~~k~G----~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
+...|+||.++|.....+ .+. .+.+..|+. +.+.+.+.+.+. ..+.||+++-.
T Consensus 99 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~ 167 (262)
T 3rkr_A 99 GVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-KRGHIINISSL 167 (262)
T ss_dssp HHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCEEEEECSS
T ss_pred HHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCceEEEEech
Confidence 235899999998632211 111 223444443 344455545443 34567777643
No 231
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=95.64 E-value=0.17 Score=48.15 Aligned_cols=113 Identities=15% Similarity=0.128 Sum_probs=70.4
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... .++. ...|. +
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 79 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA--SVYTCSRNQKELNDCLTQWRSKG-----FKVEASVCDLSSRSERQELMNT 79 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-----CEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHHHHH
Confidence 45678999998 9999999999999986 89999999888776666665321 1221 12232 1
Q ss_pred ---cc-CCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MS-EGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al-~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+ ...|++|..+|...... .+ ....+..|+. +.+...+.+.+. ..+.||+++-
T Consensus 80 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS 146 (260)
T 2ae2_A 80 VANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISS 146 (260)
T ss_dssp HHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECC
T ss_pred HHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence 12 57999999998653211 11 2233445544 334444444443 3456777654
No 232
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=95.64 E-value=0.012 Score=57.00 Aligned_cols=60 Identities=17% Similarity=0.216 Sum_probs=41.1
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEE-EEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEe
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFC-LIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIIT 252 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~-L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIit 252 (488)
|+++||+|+|+|.||+.++..+...+. +|+ .+|++.+. +. .+..++|++++.++|+||-.
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~--eLva~~d~~~~~---------~~-------gv~v~~dl~~l~~~DVvIDf 61 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGH--EIVGVIENTPKA---------TT-------PYQQYQHIADVKGADVAIDF 61 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC--EEEEEECSSCC-----------C-------CSCBCSCTTTCTTCSEEEEC
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCC--EEEEEEecCccc---------cC-------CCceeCCHHHHhCCCEEEEe
Confidence 357899999999999999988887765 555 57987651 11 12234677554499998854
No 233
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.64 E-value=0.0016 Score=65.38 Aligned_cols=32 Identities=34% Similarity=0.537 Sum_probs=30.6
Q ss_pred CcEEEEecchhHHHHHHHHHhhhhHHHHHHHH
Q psy12825 131 QKITVVGAGQVGMACTYSILTQTMARDAVSTV 162 (488)
Q Consensus 131 ~ki~vvg~g~vg~~~a~~~~~k~la~eivlid 162 (488)
.||+|||+|+||++++|.++.+++.+|++++|
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~D 32 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVD 32 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 49999999999999999999999999999988
No 234
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=95.64 E-value=0.2 Score=47.90 Aligned_cols=114 Identities=14% Similarity=0.238 Sum_probs=72.1
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
++.+++.|+|+ |.+|..++..|+..|. +|++.|++++.++....++.... . ..++. ...|. +
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~-~~~~~~~~~Dv~~~~~v~~~~~~ 80 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA--AVAFCARDGERLRAAESALRQRF--P-GARLFASVCDVLDALQVRAFAEA 80 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHS--T-TCCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc--C-CceEEEEeCCCCCHHHHHHHHHH
Confidence 45678899998 9999999999999987 89999999998887777776532 1 11122 22232 1
Q ss_pred ---ccCCCcEEEEecccccC-C--Ccch---HhhHhhhHHH----HHHHHHHHhccCCCcEEEEEe
Q psy12825 242 ---MSEGSRIVIITAGVRSL-V--GETR---LQLVDRNVKI----FKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 242 ---al~dADiVIitag~~~k-~--G~~r---~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~T 294 (488)
.+...|++|..+|.... + ..+. ...+..|+.- .+.+.+.+.+. ..+.||+++
T Consensus 81 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~is 145 (265)
T 3lf2_A 81 CERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-ADAAIVCVN 145 (265)
T ss_dssp HHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-TTEEEEEEE
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCeEEEEEC
Confidence 13467999999986432 1 1222 2335556543 34444444443 345666665
No 235
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=95.60 E-value=0.16 Score=48.90 Aligned_cols=115 Identities=14% Similarity=0.144 Sum_probs=72.7
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCC------------hhHHHHHHHHHhhcCCCCCCCcEE-EcCC
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSN------------EDRCKGEMLDLQHGAPFLRSPKIE-SGSD 239 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~------------~e~l~g~~~dL~~~~~~~~~~~v~-~ttd 239 (488)
.++.++|.|+|+ |.+|.+++..|+..|. +|+++|++ .+.++....++.... .++. ...|
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D 79 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-----RKAYTAEVD 79 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-----SCEEEEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhcC-----CceEEEEcc
Confidence 345678999998 8999999999999987 89999987 566665555554421 1221 1223
Q ss_pred c---c-----------ccCCCcEEEEecccccCC-Ccc---hHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeC
Q psy12825 240 I---A-----------MSEGSRIVIITAGVRSLV-GET---RLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISN 295 (488)
Q Consensus 240 ~---e-----------al~dADiVIitag~~~k~-G~~---r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TN 295 (488)
. + .+...|++|..+|..... ..+ -...+..|+.-...+.+.+..+ ...+.||+++-
T Consensus 80 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 80 VRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 2 1 123789999999865322 122 2344566666555566665554 34566777764
No 236
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.60 E-value=0.017 Score=56.15 Aligned_cols=69 Identities=25% Similarity=0.412 Sum_probs=49.9
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
.+. +|.|||+|.+|.+++..|+..|. .+|.++|++.++++. +.+. .......+. +.++++|+||.+.
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~-~~I~v~nR~~~ka~~----la~~------~~~~~~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGV-KDIWVVNRTIERAKA----LDFP------VKIFSLDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTC-CCEEEEESCHHHHHT----CCSS------CEEEEGGGHHHHHHTCSEEEECS
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCC-CEEEEEeCCHHHHHH----HHHH------cccCCHHHHHhhhcCCCEEEECC
Confidence 355 99999999999999999998875 589999999876553 2211 111222344 4578999999986
Q ss_pred cc
Q psy12825 254 GV 255 (488)
Q Consensus 254 g~ 255 (488)
..
T Consensus 175 p~ 176 (253)
T 3u62_A 175 SV 176 (253)
T ss_dssp ST
T ss_pred CC
Confidence 43
No 237
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=95.59 E-value=0.094 Score=49.94 Aligned_cols=113 Identities=18% Similarity=0.288 Sum_probs=70.0
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc----c--
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA----M-- 242 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e----a-- 242 (488)
.++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... .++. ...| .+ .
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~~~~~~~ 83 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA--HVVVSSRKQENVDRTVATLQGEG-----LSVTGTVCHVGKAEDRERLVA 83 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-----CceEEEEccCCCHHHHHHHHH
Confidence 345678899998 9999999999999986 89999999887776666665421 1221 1223 21 1
Q ss_pred -----cCCCcEEEEecccccC--C--Ccc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEe
Q psy12825 243 -----SEGSRIVIITAGVRSL--V--GET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 243 -----l~dADiVIitag~~~k--~--G~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+.+.|++|..+|.... + ..+ ..+.+..|+. +.+.+.+.+.+. ..+.||+++
T Consensus 84 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~is 150 (260)
T 2zat_A 84 MAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGSVLIVS 150 (260)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence 2379999999986421 1 111 1233445544 334455555443 345566665
No 238
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=95.58 E-value=0.014 Score=56.29 Aligned_cols=33 Identities=9% Similarity=0.244 Sum_probs=30.1
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeC
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDS 210 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di 210 (488)
..+||+|||+|.||.+++..|...|. +|+.+|.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~--~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGH--YVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTC--EEEECSS
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCC--EEEEecC
Confidence 45799999999999999999999987 8999987
No 239
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=95.58 E-value=0.031 Score=58.57 Aligned_cols=94 Identities=16% Similarity=0.222 Sum_probs=63.6
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEE
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVII 251 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIi 251 (488)
.....++|+|+|.|.+|..++..+...|. +|+.+|+++.+..... + .. .. . .++ +.+++||+||.
T Consensus 207 ~~L~GktVgIiG~G~IG~~vA~~Lka~Ga--~Viv~D~~p~~a~~A~-~--~G------~~--~-~sL~eal~~ADVVil 272 (436)
T 3h9u_A 207 VMIAGKTACVCGYGDVGKGCAAALRGFGA--RVVVTEVDPINALQAA-M--EG------YQ--V-LLVEDVVEEAHIFVT 272 (436)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHH-H--TT------CE--E-CCHHHHTTTCSEEEE
T ss_pred CcccCCEEEEEeeCHHHHHHHHHHHHCCC--EEEEECCChhhhHHHH-H--hC------Ce--e-cCHHHHHhhCCEEEE
Confidence 45677899999999999999998877776 8999999886543211 1 11 11 1 255 57999999998
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCc
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPv 297 (488)
+.+...--+ .+.+....|++++++++++.
T Consensus 273 t~gt~~iI~-----------------~e~l~~MK~gAIVINvgRg~ 301 (436)
T 3h9u_A 273 TTGNDDIIT-----------------SEHFPRMRDDAIVCNIGHFD 301 (436)
T ss_dssp CSSCSCSBC-----------------TTTGGGCCTTEEEEECSSSG
T ss_pred CCCCcCccC-----------------HHHHhhcCCCcEEEEeCCCC
Confidence 653221100 11244456889999999764
No 240
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=95.58 E-value=0.045 Score=53.85 Aligned_cols=112 Identities=16% Similarity=0.185 Sum_probs=69.8
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCCh-hHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCC--C
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNE-DRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEG--S 246 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~-e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~d--A 246 (488)
|+||.|+|| |.+|+.++..|+..|. +|+++|++. ........++... ....+... +|. +.+++ +
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~Dl~d~~~~~~~~~~~~~ 74 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGI--DLIVFDNLSRKGATDNLHWLSSL----GNFEFVHGDIRNKNDVTRLITKYMP 74 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSTTHHHHHHHHHTT----CCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCC--EEEEEeCCCccCchhhhhhhccC----CceEEEEcCCCCHHHHHHHHhccCC
Confidence 468999998 9999999999999886 899998742 1122222333321 11222221 122 24666 9
Q ss_pred cEEEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 247 RIVIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 247 DiVIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
|+||.+++..... .....+.+..|+.-...+.+.+.+......+|++|
T Consensus 75 d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~S 124 (347)
T 1orr_A 75 DSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSS 124 (347)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence 9999998753210 01234456778888888888888776544566665
No 241
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=95.57 E-value=0.047 Score=54.17 Aligned_cols=66 Identities=14% Similarity=0.180 Sum_probs=40.6
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEE-EEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEec
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFC-LIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITA 253 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~-L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIita 253 (488)
|+++||+|||+|.+|..++..+....- -+|+ ++|+++++++. .. . .+....++.+..++|+||++.
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~-~elvav~d~~~~~~~~------~g----~--~~~~~~~l~~~~~~DvViiat 73 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPD-FEIAGIVRRNPAEVPF------EL----Q--PFRVVSDIEQLESVDVALVCS 73 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTT-EEEEEEECC-------------CC----T--TSCEESSGGGSSSCCEEEECS
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCC-CEEEEEEcCCHHHHHH------cC----C--CcCCHHHHHhCCCCCEEEECC
Confidence 457899999999999998888876432 2666 88999876542 11 0 111224555558999999985
No 242
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=95.56 E-value=0.084 Score=50.34 Aligned_cols=118 Identities=14% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc---c---------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI---A--------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~---e--------- 241 (488)
.+.+++.|+|| |.+|..++..|+..|. +|+++|++++.++....++...........+ ...|. +
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY--RVVLIARSKQNLEKVHDEIMRSNKHVQEPIV-LPLDITDCTKADTEIKDI 81 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC--EEEEEESCHHHHHHHHHHHHHHCTTSCCCEE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhccccCcceE-EeccCCCHHHHHHHHHHH
Confidence 34567889998 9999999999999987 8999999999888777777654211011112 22232 1
Q ss_pred --ccCCCcEEEEecccccCC--Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 242 --MSEGSRIVIITAGVRSLV--GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 242 --al~dADiVIitag~~~k~--G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
.+...|++|..+|..... ..+. ...+..|+. +.+.+.+.+.+.. .+.||+++-.
T Consensus 82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~ 146 (250)
T 3nyw_A 82 HQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASR 146 (250)
T ss_dssp HHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-
T ss_pred HHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccH
Confidence 124689999999864321 1221 223444443 4455555555433 4567777643
No 243
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=95.56 E-value=0.078 Score=50.25 Aligned_cols=114 Identities=12% Similarity=0.190 Sum_probs=69.7
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC-ChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c----cc-
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-NEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A----MS- 243 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di-~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e----al- 243 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|+ +++.++....++.... .++. ...|. + .+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~~~~~~~ 77 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKA--KVVVNYRSKEDEANSVLEEIKKVG-----GEAIAVKGDVTVESDVINLVQ 77 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT-----CEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEcCCChHHHHHHHHHHHhcC-----CceEEEECCCCCHHHHHHHHH
Confidence 34578999998 9999999999999986 8999999 8777766656664321 1221 12232 1 12
Q ss_pred ------CCCcEEEEecccccCC---Ccc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 244 ------EGSRIVIITAGVRSLV---GET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 244 ------~dADiVIitag~~~k~---G~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+.|+||.+++..... ..+ ..+.+..|+. +.+.+.+.+.+..+.+.+|+++-
T Consensus 78 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS 145 (261)
T 1gee_A 78 SAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145 (261)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCC
Confidence 2789999999864321 111 1233444443 34445555554442456776654
No 244
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=95.54 E-value=0.13 Score=48.92 Aligned_cols=112 Identities=17% Similarity=0.212 Sum_probs=69.6
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc----c-------
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA----M------- 242 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e----a------- 242 (488)
++|.|+|| |.+|..++..|+..|. +|++.|++++.++....++.... ....+ ...| .+ .
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~-~~~D~~~~~~v~~~~~~~~~~ 76 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGF--AVAIADYNDATAKAVASEINQAG---GHAVA-VKVDVSDRDQVFAAVEQARKT 76 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT---CCEEE-EECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---CcEEE-EEecCCCHHHHHHHHHHHHHH
Confidence 56889998 9999999999999986 89999999888776666665421 11111 1223 21 1
Q ss_pred cCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 SEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 l~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.+.|++|..+|..... ..+. ...+..|+. +.+.+.+.+.+..+.+.||+++-
T Consensus 77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS 139 (256)
T 1geg_A 77 LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACS 139 (256)
T ss_dssp TTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECc
Confidence 23799999999864321 1111 223444543 44555666655443466777653
No 245
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=95.53 E-value=0.12 Score=49.30 Aligned_cols=113 Identities=15% Similarity=0.108 Sum_probs=72.1
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e-------- 241 (488)
.+.+++.|+|+ |.+|.+++..|+..|. +|++.|++.+.++....++.+.. .++. ...| .+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA--SVVVTDLKSEGAEAVAAAIRQAG-----GKAIGLECNVTDEQHREAVIKA 82 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHHHHH
Confidence 45678888898 9999999999999987 89999999988887777776531 1221 1223 21
Q ss_pred ---ccCCCcEEEEecccccCC--Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLV--GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~--G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|..... ..+. ...+.-|+. +.+.+.+.+.+. ..+.||+++-
T Consensus 83 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS 147 (256)
T 3gaf_A 83 ALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNISS 147 (256)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence 123789999999865321 1222 223444543 445555555443 3466777764
No 246
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=95.53 E-value=0.12 Score=50.05 Aligned_cols=114 Identities=13% Similarity=0.197 Sum_probs=69.8
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... .++. ...|. +
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 92 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGL--RVFVCARGEEGLRTTLKELREAG-----VEADGRTCDVRSVPEIEALVAA 92 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-----CceEEEECCCCCHHHHHHHHHH
Confidence 34567999998 9999999999999986 89999999888776666665421 1121 12232 1
Q ss_pred ---ccCCCcEEEEecccccCCC---cc---hHhhHhhhHHHHHHHHHHHhcc-----CCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVKIFKDLIPKIAKG-----SPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~G---~~---r~dll~~N~~ii~ei~~~I~~~-----~p~a~vIv~TN 295 (488)
.+.+.|++|..+|...... .+ -...+..|+.-...+.+.+.+. ...+.||+++-
T Consensus 93 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS 160 (277)
T 2rhc_B 93 VVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS 160 (277)
T ss_dssp HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECC
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECc
Confidence 1337899999998653211 11 1234455555444444443322 12356777654
No 247
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.53 E-value=0.024 Score=56.89 Aligned_cols=77 Identities=13% Similarity=0.160 Sum_probs=56.3
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCC---hhHHHHHHHHHhhcCCCCCCCcEEE--cCC----ccccC
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSN---EDRCKGEMLDLQHGAPFLRSPKIES--GSD----IAMSE 244 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~---~e~l~g~~~dL~~~~~~~~~~~v~~--ttd----~eal~ 244 (488)
..+.+++.|+|||.+|.+++..|+..|. .+|.+++++ .++++..+.++.... ...+.. ..+ .+.+.
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L~~~G~-~~v~v~nRt~~~~~~a~~la~~~~~~~----~~~v~~~~~~~l~~~~~~l~ 219 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQAAIEGI-KEIKLFNRKDDFFEKAVAFAKRVNENT----DCVVTVTDLADQHAFTEALA 219 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEECSSTHHHHHHHHHHHHHHHS----SCEEEEEETTCHHHHHHHHH
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHcCC-CEEEEEECCCchHHHHHHHHHHhhhcc----CcceEEechHhhhhhHhhcc
Confidence 3466799999999999999999998775 489999999 788887777776532 122222 223 23478
Q ss_pred CCcEEEEeccc
Q psy12825 245 GSRIVIITAGV 255 (488)
Q Consensus 245 dADiVIitag~ 255 (488)
++|+||.+...
T Consensus 220 ~~DiIINaTp~ 230 (312)
T 3t4e_A 220 SADILTNGTKV 230 (312)
T ss_dssp HCSEEEECSST
T ss_pred CceEEEECCcC
Confidence 99999998643
No 248
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=95.53 E-value=0.0091 Score=59.88 Aligned_cols=111 Identities=14% Similarity=0.165 Sum_probs=68.5
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHc-CCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--C-Cc----ccc
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQ-GIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--S-DI----AMS 243 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~-~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--t-d~----eal 243 (488)
..++++||.|+|| |.+|+.++..|+.. +. +|+.+|++.+.+.. +... ...++... + |. +++
T Consensus 20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~----~~~~----~~v~~~~~Dl~~d~~~~~~~~ 89 (372)
T 3slg_A 20 GSMKAKKVLILGVNGFIGHHLSKRILETTDW--EVFGMDMQTDRLGD----LVKH----ERMHFFEGDITINKEWVEYHV 89 (372)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHHSSC--EEEEEESCCTTTGG----GGGS----TTEEEEECCTTTCHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCC--EEEEEeCChhhhhh----hccC----CCeEEEeCccCCCHHHHHHHh
Confidence 4567789999998 99999999999987 66 89999997654332 1110 11122211 1 32 257
Q ss_pred CCCcEEEEecccccCCC--cchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 244 EGSRIVIITAGVRSLVG--ETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 244 ~dADiVIitag~~~k~G--~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+++|+||.+++...... ....+.+..|+.-...+.+.+.+.. ..+|++|-
T Consensus 90 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS 141 (372)
T 3slg_A 90 KKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPST 141 (372)
T ss_dssp HHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECC
T ss_pred ccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCc
Confidence 78999999886532111 1233445666666667777777766 34555553
No 249
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=95.52 E-value=0.1 Score=50.07 Aligned_cols=115 Identities=16% Similarity=0.282 Sum_probs=73.2
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc----------cc
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI----------AM 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~----------ea 242 (488)
.+.+++.|+|| |.+|.+++..|+..|. +|++.|++++.++....++..... ...+. ...|. +.
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~~ 82 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA--NVLINGRREENVNETIKEIRAQYP---DAILQPVVADLGTEQGCQDVIEK 82 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHCT---TCEEEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC---CceEEEEecCCCCHHHHHHHHHh
Confidence 34567888898 9999999999999987 899999999888877777765421 11221 12232 23
Q ss_pred cCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 SEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 l~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+. ..+.||+++-
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS 144 (267)
T 3t4x_A 83 YPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFIAS 144 (267)
T ss_dssp CCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TEEEEEEECC
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEEcc
Confidence 458999999998653221 122 223455544 345555555543 3456777653
No 250
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=95.52 E-value=0.16 Score=49.75 Aligned_cols=115 Identities=18% Similarity=0.209 Sum_probs=72.3
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCC------------hhHHHHHHHHHhhcCCCCCCCcEE-EcCC
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSN------------EDRCKGEMLDLQHGAPFLRSPKIE-SGSD 239 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~------------~e~l~g~~~dL~~~~~~~~~~~v~-~ttd 239 (488)
.++.+++.|+|| |.+|..++..|+..|. .|+++|++ .+.++....++.... .++. ...|
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D 97 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGA--DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-----RRIIASQVD 97 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT-----CCEEEEECC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecccccccccccccCHHHHHHHHHHHHhcC-----CceEEEECC
Confidence 345678889998 8999999999999987 89999987 666666666665431 1221 2223
Q ss_pred c---c-----------ccCCCcEEEEecccccCCC----cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEe
Q psy12825 240 I---A-----------MSEGSRIVIITAGVRSLVG----ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 240 ~---e-----------al~dADiVIitag~~~k~G----~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~T 294 (488)
. + .+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+....+.||+++
T Consensus 98 v~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~is 177 (299)
T 3t7c_A 98 VRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTS 177 (299)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 2 1 2347899999998643211 222 233445543 4455556655555567777776
Q ss_pred C
Q psy12825 295 N 295 (488)
Q Consensus 295 N 295 (488)
-
T Consensus 178 S 178 (299)
T 3t7c_A 178 S 178 (299)
T ss_dssp C
T ss_pred C
Confidence 4
No 251
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.49 E-value=0.013 Score=61.85 Aligned_cols=68 Identities=19% Similarity=0.322 Sum_probs=49.8
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE--cCCc-----cccCCCcE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES--GSDI-----AMSEGSRI 248 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~--ttd~-----eal~dADi 248 (488)
..|||.|+|+|.+|+++|..|...+. +++++|.|+++++.....+ + ..+.. .+++ +.+++||+
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~--~v~vId~d~~~~~~~~~~~-~-------~~~i~Gd~~~~~~L~~Agi~~ad~ 71 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENN--DITIVDKDGDRLRELQDKY-D-------LRVVNGHASHPDVLHEAGAQDADM 71 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTE--EEEEEESCHHHHHHHHHHS-S-------CEEEESCTTCHHHHHHHTTTTCSE
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHhc-C-------cEEEEEcCCCHHHHHhcCCCcCCE
Confidence 46899999999999999999987776 8999999998887543333 1 12222 1232 24899999
Q ss_pred EEEec
Q psy12825 249 VIITA 253 (488)
Q Consensus 249 VIita 253 (488)
+|.+.
T Consensus 72 ~ia~t 76 (461)
T 4g65_A 72 LVAVT 76 (461)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 88754
No 252
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=95.48 E-value=0.17 Score=48.69 Aligned_cols=115 Identities=19% Similarity=0.236 Sum_probs=73.1
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC-------------ChhHHHHHHHHHhhcCCCCCCCcEE-EcC
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-------------NEDRCKGEMLDLQHGAPFLRSPKIE-SGS 238 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di-------------~~e~l~g~~~dL~~~~~~~~~~~v~-~tt 238 (488)
.++.+++.|+|+ |.+|..++..|+..|. +|+++|+ +.+.++....++.... .++. ...
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 80 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA--DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN-----RRIVAAVV 80 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT-----CCEEEEEC
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhcC-----CeEEEEEC
Confidence 345678899998 9999999999999987 8999998 5666666555555421 1222 122
Q ss_pred C---cc-----------ccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEe
Q psy12825 239 D---IA-----------MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 239 d---~e-----------al~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~T 294 (488)
| ++ .+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+..+.+.||+++
T Consensus 81 D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~is 160 (277)
T 3tsc_A 81 DTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILIS 160 (277)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEc
Confidence 3 21 1346899999998653321 122 223444533 4566666676665567777776
Q ss_pred C
Q psy12825 295 N 295 (488)
Q Consensus 295 N 295 (488)
-
T Consensus 161 S 161 (277)
T 3tsc_A 161 S 161 (277)
T ss_dssp C
T ss_pred c
Confidence 4
No 253
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.48 E-value=0.0022 Score=64.88 Aligned_cols=33 Identities=24% Similarity=0.501 Sum_probs=31.0
Q ss_pred CCcEEEEecchhHHHHHHHHHhhhhHHHHHHHH
Q psy12825 130 DQKITVVGAGQVGMACTYSILTQTMARDAVSTV 162 (488)
Q Consensus 130 ~~ki~vvg~g~vg~~~a~~~~~k~la~eivlid 162 (488)
..||+|||+|.||+++|++++.+++++|++++|
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D 37 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVID 37 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEe
Confidence 369999999999999999999999999999988
No 254
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=95.45 E-value=0.15 Score=49.50 Aligned_cols=148 Identities=14% Similarity=0.157 Sum_probs=92.1
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---c---------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---I--------- 240 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~--------- 240 (488)
.+.+.+.|.|+ +.+|..++..|+..|. .|+++|++++.++..+.++...- .++. ...| .
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~~~g-----~~~~~~~~Dvt~~~~v~~~~~~ 77 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS--IVVAVELLEDRLNQIVQELRGMG-----KEVLGVKADVSKKKDVEEFVRR 77 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEccCCCHHHHHHHHHH
Confidence 45567777788 8899999999999987 89999999999998888887532 1111 1222 1
Q ss_pred --cccCCCcEEEEeccccc--CC--Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCCc------hhHH
Q psy12825 241 --AMSEGSRIVIITAGVRS--LV--GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNPV------DVLT 301 (488)
Q Consensus 241 --eal~dADiVIitag~~~--k~--G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNPv------di~t 301 (488)
+.+-.-|++|..+|... .+ ..+. ...+.-|+. ..+...+.|.+.. .+.||+++--. +...
T Consensus 78 ~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~~~~~ 156 (254)
T 4fn4_A 78 TFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGFAGAP 156 (254)
T ss_dssp HHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSSSCHH
T ss_pred HHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCCCChH
Confidence 23567999999998643 22 1222 223444433 5577777776654 46677775322 2334
Q ss_pred HHHHHhcCCCCCcEEeecCChHHHHHHHHHHHHhCCCCCCceeEEE
Q psy12825 302 YISWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFII 347 (488)
Q Consensus 302 ~~~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lgv~p~~V~~~V~ 347 (488)
|.+.|.. + ..+-+.+|..++ |..|++-.+
T Consensus 157 Y~asKaa---------l------~~ltr~lA~ela--~~gIrVN~V 185 (254)
T 4fn4_A 157 YTVAKHG---------L------IGLTRSIAAHYG--DQGIRAVAV 185 (254)
T ss_dssp HHHHHHH---------H------HHHHHHHHHHHG--GGTEEEEEE
T ss_pred HHHHHHH---------H------HHHHHHHHHHhh--hhCeEEEEE
Confidence 4444431 2 235666777773 555665444
No 255
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.44 E-value=0.027 Score=54.53 Aligned_cols=74 Identities=12% Similarity=0.266 Sum_probs=52.5
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCCh-------------------hHHHHHHHHHhhcCCCCCCCcEEE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNE-------------------DRCKGEMLDLQHGAPFLRSPKIES 236 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~-------------------e~l~g~~~dL~~~~~~~~~~~v~~ 236 (488)
+..||.|+|+|.+|+.++..|+..|+ .+|.|+|.+. .+++..+..+.+.. +..++..
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gv-g~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n---p~~~v~~ 102 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGV-GTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN---PDIQLTA 102 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTC-SEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC---TTSEEEE
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCC-CeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC---CCCEEEE
Confidence 45699999999999999999999987 4899998753 45666666666542 2334443
Q ss_pred cC-Cc------cccCCCcEEEEec
Q psy12825 237 GS-DI------AMSEGSRIVIITA 253 (488)
Q Consensus 237 tt-d~------eal~dADiVIita 253 (488)
.. .+ +.++++|+||.+.
T Consensus 103 ~~~~~~~~~~~~~~~~~DvVi~~~ 126 (251)
T 1zud_1 103 LQQRLTGEALKDAVARADVVLDCT 126 (251)
T ss_dssp ECSCCCHHHHHHHHHHCSEEEECC
T ss_pred EeccCCHHHHHHHHhcCCEEEECC
Confidence 22 11 2367899999884
No 256
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=95.43 E-value=0.078 Score=50.73 Aligned_cols=112 Identities=17% Similarity=0.141 Sum_probs=71.0
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc---------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA--------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e--------- 241 (488)
.+.+++.|+|+ |.+|.+++..|+..|. +|++.|++++.++....++.... .. ...| .+
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~------~~-~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEFGPRV------HA-LRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGGGE------EE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCcc------eE-EEccCCCHHHHHHHHHHH
Confidence 45678999998 9999999999999987 89999999988876665553211 11 1122 21
Q ss_pred --ccCCCcEEEEecccccCCC---cc---hHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k~G---~~---r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TN 295 (488)
.+...|++|..+|...... .+ -...+.-|+.-...+.+.+..+ .+.+.||+++-
T Consensus 77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 2347899999998754211 12 2234556655444455554443 22466777764
No 257
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=95.43 E-value=0.12 Score=51.17 Aligned_cols=116 Identities=16% Similarity=0.239 Sum_probs=72.2
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c----c---
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A----M--- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e----a--- 242 (488)
++.++|.|+|| |.+|..++..|+..|. +|++.|++.+.++....++.... ...++. ...|. + .
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~ 80 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEAEG---SGPEVMGVQLDVASREGFKMAADE 80 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC---CCCeEEEEECCCCCHHHHHHHHHH
Confidence 45678999999 9999999999999987 89999999998887777765431 111222 12232 1 1
Q ss_pred ----cCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhcc-----CCCcEEEEEeC
Q psy12825 243 ----SEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKG-----SPDCILLIISN 295 (488)
Q Consensus 243 ----l~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~-----~p~a~vIv~TN 295 (488)
+...|+||.++|...... .+ -.+++.-|+. +.+.+.+.+.+. ...+.||+++-
T Consensus 81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS 152 (319)
T 3ioy_A 81 VEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTAS 152 (319)
T ss_dssp HHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECC
T ss_pred HHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecc
Confidence 246799999998643211 11 2233444433 445555555443 23566777663
No 258
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=95.43 E-value=0.064 Score=54.61 Aligned_cols=127 Identities=15% Similarity=0.195 Sum_probs=75.4
Q ss_pred HHHHH-HHH-HhhhhHHHHHHHHHHH-HhhhCC--------------CCCCCCceEEEEecccchHHHHHHHHHcCCCCe
Q psy12825 142 GMACT-YSI-LTQTMARDAVSTVDRL-LSQVAP--------------SIESPDQKITVVGAGQVGMACTYSILTQGIYSN 204 (488)
Q Consensus 142 g~~~a-~~~-~~k~la~eivlid~~~-~~e~~~--------------~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~e 204 (488)
+-+.| |++ ++-.+++.+...+... .++... ......++|+|||.|.||..+|..+..-|. +
T Consensus 108 ~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~--~ 185 (352)
T 3gg9_A 108 PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAGYGRAFGM--N 185 (352)
T ss_dssp SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHHHHHHTTC--E
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHHHHHhCCC--E
Confidence 44444 333 2246777777777543 222211 024467899999999999999998877676 8
Q ss_pred EEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhc
Q psy12825 205 FCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAK 283 (488)
Q Consensus 205 l~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~ 283 (488)
|..||++.... ..... .+....++ +.+++||+|+++..... .++ .++ | .+.+..
T Consensus 186 V~~~d~~~~~~-----~~~~~-------g~~~~~~l~ell~~aDiV~l~~Plt~---~t~-~li--~-------~~~l~~ 240 (352)
T 3gg9_A 186 VLVWGRENSKE-----RARAD-------GFAVAESKDALFEQSDVLSVHLRLND---ETR-SII--T-------VADLTR 240 (352)
T ss_dssp EEEECSHHHHH-----HHHHT-------TCEECSSHHHHHHHCSEEEECCCCST---TTT-TCB--C-------HHHHTT
T ss_pred EEEECCCCCHH-----HHHhc-------CceEeCCHHHHHhhCCEEEEeccCcH---HHH-Hhh--C-------HHHHhh
Confidence 99999875321 11111 11233455 46889999999863111 011 111 1 123445
Q ss_pred cCCCcEEEEEeC
Q psy12825 284 GSPDCILLIISN 295 (488)
Q Consensus 284 ~~p~a~vIv~TN 295 (488)
..|.+++|+++.
T Consensus 241 mk~gailIN~aR 252 (352)
T 3gg9_A 241 MKPTALFVNTSR 252 (352)
T ss_dssp SCTTCEEEECSC
T ss_pred CCCCcEEEECCC
Confidence 568899999973
No 259
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=95.43 E-value=0.11 Score=49.77 Aligned_cols=48 Identities=15% Similarity=0.230 Sum_probs=38.9
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC-ChhHHHHHHHHHhh
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-NEDRCKGEMLDLQH 224 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di-~~e~l~g~~~dL~~ 224 (488)
++.++|.|+|+ |.+|..++..|+..|. +|+++|+ +++.++....++..
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~ 58 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGF--RVVVHYRHSEGAAQRLVAELNA 58 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHH
Confidence 45567888898 9999999999999986 8999999 88877766666654
No 260
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=95.42 E-value=0.051 Score=53.29 Aligned_cols=69 Identities=12% Similarity=0.141 Sum_probs=51.6
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~ 255 (488)
..++|.|+|+|.++..+++.|...|. .+|.+++++.++++..+.++.. .+ ..+++ +.++|+||.+...
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~-~~i~v~nRt~~ka~~la~~~~~--------~~--~~~~~-~~~~DivInaTp~ 185 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGF-EKLKIYARNVKTGQYLAALYGY--------AY--INSLE-NQQADILVNVTSI 185 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTC-CCEEEECSCHHHHHHHHHHHTC--------EE--ESCCT-TCCCSEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHcCC--------cc--chhhh-cccCCEEEECCCC
Confidence 34689999999999999999988875 4899999999888776655521 11 11223 5789999998654
Q ss_pred c
Q psy12825 256 R 256 (488)
Q Consensus 256 ~ 256 (488)
+
T Consensus 186 g 186 (271)
T 1npy_A 186 G 186 (271)
T ss_dssp T
T ss_pred C
Confidence 3
No 261
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=95.42 E-value=0.09 Score=49.52 Aligned_cols=115 Identities=11% Similarity=0.105 Sum_probs=71.0
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc---------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA--------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e--------- 241 (488)
++.++|.|+|+ |.+|..++..|+..|. +|++.|++++.++....++.+.. ....+ ...| .+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~-~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA--TVVGTATSQASAEKFENSMKEKG---FKARG-LVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHTT---CCEEE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---CceEE-EEecCCCHHHHHHHHHHH
Confidence 34568889998 9999999999999987 89999999988887766665431 11111 1122 21
Q ss_pred --ccCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 242 --MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 242 --al~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
.+...|++|.++|...... .+ -...+..|+. +.+.+.+.+.+. +.+.+|+++-.
T Consensus 77 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~ 142 (247)
T 3lyl_A 77 KAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-RWGRIISIGSV 142 (247)
T ss_dssp HHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT
T ss_pred HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcch
Confidence 1235799999998753211 11 2233444543 344444444443 34567777643
No 262
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.42 E-value=0.0023 Score=63.99 Aligned_cols=33 Identities=42% Similarity=0.619 Sum_probs=31.2
Q ss_pred CCcEEEEecchhHHHHHHHHHhhhhHHHHHHHH
Q psy12825 130 DQKITVVGAGQVGMACTYSILTQTMARDAVSTV 162 (488)
Q Consensus 130 ~~ki~vvg~g~vg~~~a~~~~~k~la~eivlid 162 (488)
..||+|||+|+||+++||+++.+++.+|++++|
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~D 46 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLD 46 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 369999999999999999999999999999988
No 263
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.40 E-value=0.011 Score=56.69 Aligned_cols=71 Identities=10% Similarity=0.244 Sum_probs=48.1
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc--cccCCCcEEEE
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI--AMSEGSRIVII 251 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~--eal~dADiVIi 251 (488)
..+.++|.|||+|.+|..-+..|+..|- +|++++.+.. . ...++.... ...+. ..++ +++.++|+||.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA--~VtVvap~~~--~-~l~~l~~~~----~i~~i-~~~~~~~dL~~adLVIa 97 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA--AITVVAPTVS--A-EINEWEAKG----QLRVK-RKKVGEEDLLNVFFIVV 97 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC--CEEEECSSCC--H-HHHHHHHTT----SCEEE-CSCCCGGGSSSCSEEEE
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEECCCCC--H-HHHHHHHcC----CcEEE-ECCCCHhHhCCCCEEEE
Confidence 3567899999999999999988888876 8999987542 1 122333211 11222 2333 67999999998
Q ss_pred ecc
Q psy12825 252 TAG 254 (488)
Q Consensus 252 tag 254 (488)
+.+
T Consensus 98 AT~ 100 (223)
T 3dfz_A 98 ATN 100 (223)
T ss_dssp CCC
T ss_pred CCC
Confidence 853
No 264
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.40 E-value=0.06 Score=47.32 Aligned_cols=85 Identities=12% Similarity=0.216 Sum_probs=51.9
Q ss_pred CCCCCceEEEEec----ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcccc-CCCc
Q psy12825 173 IESPDQKITVVGA----GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMS-EGSR 247 (488)
Q Consensus 173 ~~~~~~KIaIIGA----G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal-~dAD 247 (488)
...++.+|+|||+ |.+|..++..|...|+ + ++++|+.. + .+. .+....+++++ .++|
T Consensus 10 ~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~--~--V~~vnp~~-~----~i~---------G~~~~~s~~el~~~vD 71 (138)
T 1y81_A 10 NSKEFRKIALVGASKNPAKYGNIILKDLLSKGF--E--VLPVNPNY-D----EIE---------GLKCYRSVRELPKDVD 71 (138)
T ss_dssp ----CCEEEEETCCSCTTSHHHHHHHHHHHTTC--E--EEEECTTC-S----EET---------TEECBSSGGGSCTTCC
T ss_pred cccCCCeEEEEeecCCCCCHHHHHHHHHHHCCC--E--EEEeCCCC-C----eEC---------CeeecCCHHHhCCCCC
Confidence 3457889999999 9999999999988887 5 55555542 0 010 12233455544 4799
Q ss_pred EEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEE
Q psy12825 248 IVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILL 291 (488)
Q Consensus 248 iVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vI 291 (488)
++|++.. .+...++.+++.+....++++
T Consensus 72 lvii~vp----------------~~~v~~v~~~~~~~g~~~i~~ 99 (138)
T 1y81_A 72 VIVFVVP----------------PKVGLQVAKEAVEAGFKKLWF 99 (138)
T ss_dssp EEEECSC----------------HHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEeC----------------HHHHHHHHHHHHHcCCCEEEE
Confidence 9999952 234555555555555555333
No 265
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.40 E-value=0.035 Score=55.75 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=56.6
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCC---hhHHHHHHHHHhhcCCCCCCCcEEE--cCCc----cccC
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSN---EDRCKGEMLDLQHGAPFLRSPKIES--GSDI----AMSE 244 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~---~e~l~g~~~dL~~~~~~~~~~~v~~--ttd~----eal~ 244 (488)
..+.+++.|+|+|.+|.+++..|+..|. .+|.+++++ .++++..+.++.... ...+.. ..+. +.+.
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga-~~V~i~nR~~~~~~~a~~la~~~~~~~----~~~~~~~~~~~~~~l~~~l~ 225 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGV-KEISIFNRKDDFYANAEKTVEKINSKT----DCKAQLFDIEDHEQLRKEIA 225 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTC-SEEEEEECSSTTHHHHHHHHHHHHHHS----SCEEEEEETTCHHHHHHHHH
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCC-CEEEEEECCCchHHHHHHHHHHhhhhc----CCceEEeccchHHHHHhhhc
Confidence 3567899999999999999999998774 489999999 888887777776542 122222 2232 3467
Q ss_pred CCcEEEEeccc
Q psy12825 245 GSRIVIITAGV 255 (488)
Q Consensus 245 dADiVIitag~ 255 (488)
++|+||.+...
T Consensus 226 ~aDiIINaTp~ 236 (315)
T 3tnl_A 226 ESVIFTNATGV 236 (315)
T ss_dssp TCSEEEECSST
T ss_pred CCCEEEECccC
Confidence 99999998643
No 266
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=95.40 E-value=0.12 Score=49.88 Aligned_cols=76 Identities=16% Similarity=0.218 Sum_probs=54.5
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCcc-----------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDIA----------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~e----------- 241 (488)
.+.++|.|+|| |.+|..++..|+..|. .|++.+++.++++....++.... ..++. ...|..
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dl~~~~~~v~~~~~ 83 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNSN----HENVVFHQLDVTDPIATMSSLAD 83 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT----CCSEEEEECCTTSCHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC----CCceEEEEccCCCcHHHHHHHHH
Confidence 34567888898 9999999999999987 89999999998887777776532 11222 122321
Q ss_pred ----ccCCCcEEEEecccc
Q psy12825 242 ----MSEGSRIVIITAGVR 256 (488)
Q Consensus 242 ----al~dADiVIitag~~ 256 (488)
.+...|++|..+|..
T Consensus 84 ~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 84 FIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHSSCCEEEECCCCC
T ss_pred HHHHhCCCCCEEEECCccc
Confidence 124789999999864
No 267
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=95.39 E-value=0.12 Score=50.22 Aligned_cols=148 Identities=16% Similarity=0.144 Sum_probs=92.2
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---c----------
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---I---------- 240 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~---------- 240 (488)
+.+.+.|.|+ +.+|..++..|+..|. .|++.|++++.++..+.++.+.. .++. ...| .
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~g-----~~~~~~~~Dv~~~~~v~~~~~~~ 80 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTRKG-----YDAHGVAFDVTDELAIEAAFSKL 80 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHTT-----CCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEeeCCCHHHHHHHHHHH
Confidence 4556666687 8899999999999997 89999999999888777776532 1111 1112 1
Q ss_pred -cccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCCch------hHHHH
Q psy12825 241 -AMSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNPVD------VLTYI 303 (488)
Q Consensus 241 -eal~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNPvd------i~t~~ 303 (488)
+.+-.-|++|..+|...... .+. ...+.-|+. ..+...+.|.+....+.||+++--.. ...|.
T Consensus 81 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~ 160 (255)
T 4g81_D 81 DAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT 160 (255)
T ss_dssp HHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHH
T ss_pred HHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHH
Confidence 24667899999998754321 122 223444543 45777777766555677888863322 33444
Q ss_pred HHHhcCCCCCcEEeecCChHHHHHHHHHHHHhCCCCCCceeEEE
Q psy12825 304 SWKLSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFII 347 (488)
Q Consensus 304 ~~k~sg~p~~rViG~gt~lds~R~~~~lA~~Lgv~p~~V~~~V~ 347 (488)
+.|. |+ ..+-+.+|..++ |..|++-.+
T Consensus 161 asKa---------al------~~ltr~lA~ela--~~gIrVN~V 187 (255)
T 4g81_D 161 AAKG---------GI------KMLTCSMAAEWA--QFNIQTNAI 187 (255)
T ss_dssp HHHH---------HH------HHHHHHHHHHHG--GGTEEEEEE
T ss_pred HHHH---------HH------HHHHHHHHHHhc--ccCeEEEEE
Confidence 4442 11 235666777774 455665433
No 268
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=95.39 E-value=0.052 Score=52.24 Aligned_cols=78 Identities=13% Similarity=0.233 Sum_probs=52.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c----ccC-
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A----MSE- 244 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e----al~- 244 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|+++++++....++..... ...++. ...|. + .++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~ 79 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGA--KVTITGRHAERLEETRQQILAAGV--SEQNVNSVVADVTTDAGQDEILST 79 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC--CGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccc--CCCceeEEecccCCHHHHHHHHHH
Confidence 45567888898 9999999999999986 899999998888766666622110 011222 12232 1 233
Q ss_pred ------CCcEEEEecccc
Q psy12825 245 ------GSRIVIITAGVR 256 (488)
Q Consensus 245 ------dADiVIitag~~ 256 (488)
+.|++|..+|..
T Consensus 80 ~~~~~g~id~lv~~Ag~~ 97 (278)
T 1spx_A 80 TLGKFGKLDILVNNAGAA 97 (278)
T ss_dssp HHHHHSCCCEEEECCC--
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 799999999864
No 269
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=95.39 E-value=0.03 Score=54.99 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=67.4
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE-cCC---c----cccCC-
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES-GSD---I----AMSEG- 245 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~-ttd---~----eal~d- 245 (488)
+.++|.|+|| |.+|.+++..|+..|. +|+++|++++.... ..+.+.. ...++.. ..| . +.+++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~--~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~ 74 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGY--EVYGADRRSGEFAS--WRLKELG---IENDVKIIHMDLLEFSNIIRTIEKV 74 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCCSTTTT--HHHHHTT---CTTTEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCCccccc--ccHhhcc---ccCceeEEECCCCCHHHHHHHHHhc
Confidence 4579999999 9999999999999886 89999997654321 1122211 0112221 223 2 23444
Q ss_pred -CcEEEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 246 -SRIVIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 246 -ADiVIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
.|+||.+++..... .....+.+..|+.-...+.+.+.+......+|++|
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S 126 (345)
T 2z1m_A 75 QPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAS 126 (345)
T ss_dssp CCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEe
Confidence 59999998754211 12234456667776677777766654324455554
No 270
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=95.38 E-value=0.031 Score=57.40 Aligned_cols=116 Identities=15% Similarity=0.117 Sum_probs=69.4
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChh---HHHHHHHHHhhcCC------CCCCCcEEEcCCc--
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNED---RCKGEMLDLQHGAP------FLRSPKIESGSDI-- 240 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e---~l~g~~~dL~~~~~------~~~~~~v~~ttd~-- 240 (488)
...++++|.|+|| |.+|..++..|+..+. +|++++++++ .++.....+..... ......+. ..|+
T Consensus 65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v-~~Dl~d 141 (427)
T 4f6c_A 65 SHRPLGNTLLTGATGFLGAYLIEALQGYSH--RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVI-VGDFEC 141 (427)
T ss_dssp CCCCCEEEEEECTTSHHHHHHHHHHTTTEE--EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEE-EECC--
T ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHcCCC--EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEE-eCCCCC
Confidence 4456779999999 9999999999966665 8999998766 33333333322100 00111111 2232
Q ss_pred ----cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 241 ----AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 241 ----eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+++.++|+||.+++..... ....+.+..|+.-...+++...+ . ...+|++|
T Consensus 142 ~~~l~~~~~~d~Vih~A~~~~~~-~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~S 196 (427)
T 4f6c_A 142 MDDVVLPENMDTIIHAGARTDHF-GDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVS 196 (427)
T ss_dssp -CCCCCSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEE
T ss_pred cccCCCcCCCCEEEECCcccCCC-CCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEEC
Confidence 2567999999998754321 23445567788888888888777 2 33455554
No 271
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=95.38 E-value=0.049 Score=56.94 Aligned_cols=94 Identities=15% Similarity=0.251 Sum_probs=62.1
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEE
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVII 251 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIi 251 (488)
.....++|+|+|+|.+|..++..+...|. +|+.+|+++.+..... ... .. ..++ +.+++||+||.
T Consensus 216 ~~L~GktV~ViG~G~IGk~vA~~Lra~Ga--~Viv~D~dp~ra~~A~---~~G------~~---v~~Leeal~~ADIVi~ 281 (435)
T 3gvp_A 216 MMFGGKQVVVCGYGEVGKGCCAALKAMGS--IVYVTEIDPICALQAC---MDG------FR---LVKLNEVIRQVDIVIT 281 (435)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHH---HTT------CE---ECCHHHHTTTCSEEEE
T ss_pred ceecCCEEEEEeeCHHHHHHHHHHHHCCC--EEEEEeCChhhhHHHH---HcC------CE---eccHHHHHhcCCEEEE
Confidence 45577899999999999999998876666 8999999986543211 111 11 1244 57999999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCc
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV 297 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPv 297 (488)
+.+.+ + ++. .+.+....|.+++++++.+.
T Consensus 282 atgt~---~------------lI~--~e~l~~MK~gailINvgrg~ 310 (435)
T 3gvp_A 282 CTGNK---N------------VVT--REHLDRMKNSCIVCNMGHSN 310 (435)
T ss_dssp CSSCS---C------------SBC--HHHHHHSCTTEEEEECSSTT
T ss_pred CCCCc---c------------cCC--HHHHHhcCCCcEEEEecCCC
Confidence 74321 1 111 11223345789999998763
No 272
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=95.37 E-value=0.1 Score=48.76 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=53.8
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc----cc----
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA----MS---- 243 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e----al---- 243 (488)
+++|.|+|+ |.+|..++..|+..|. +|++.|++.++++....++..... .++. ...| .+ .+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~ 75 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY--ALALGARSVDRLEKIAHELMQEQG----VEVFYHHLDVSKAESVEEFSKKVL 75 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHHC----CCEEEEECCTTCHHHHHHHCC-HH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhcC----CeEEEEEeccCCHHHHHHHHHHHH
Confidence 457889998 8999999999999987 899999999988877777753211 1221 1122 21 22
Q ss_pred ---CCCcEEEEeccccc
Q psy12825 244 ---EGSRIVIITAGVRS 257 (488)
Q Consensus 244 ---~dADiVIitag~~~ 257 (488)
...|++|..+|...
T Consensus 76 ~~~g~id~li~~Ag~~~ 92 (235)
T 3l77_A 76 ERFGDVDVVVANAGLGY 92 (235)
T ss_dssp HHHSSCSEEEECCCCCC
T ss_pred HhcCCCCEEEECCcccc
Confidence 37899999998653
No 273
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=95.36 E-value=0.02 Score=57.60 Aligned_cols=69 Identities=13% Similarity=0.167 Sum_probs=49.1
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeE-EEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-cC--CCcEEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNF-CLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-SE--GSRIVI 250 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el-~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l~--dADiVI 250 (488)
.+++||+|||+|.+|...+..+.......+| .++|+++++++..+.... +...+|+++ ++ ++|+|+
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~----------~~~~~~~~~ll~~~~~D~V~ 80 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTG----------ARGHASLTDMLAQTDADIVI 80 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHC----------CEEESCHHHHHHHCCCSEEE
T ss_pred CCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcC----------CceeCCHHHHhcCCCCCEEE
Confidence 3568999999999999988888776211254 489999988775544331 234567754 43 899999
Q ss_pred Eec
Q psy12825 251 ITA 253 (488)
Q Consensus 251 ita 253 (488)
++.
T Consensus 81 i~t 83 (354)
T 3q2i_A 81 LTT 83 (354)
T ss_dssp ECS
T ss_pred ECC
Confidence 985
No 274
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=95.36 E-value=0.086 Score=50.00 Aligned_cols=73 Identities=15% Similarity=0.213 Sum_probs=51.7
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc----ccC--
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA----MSE-- 244 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e----al~-- 244 (488)
++.++|.|+|+ |.+|..++..|+..|. +|+++|++.+.++....++.. ...+ ...| .+ .++
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~-~~~D~~~~~~v~~~~~~~ 80 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGA--SAVLLDLPNSGGEAQAKKLGN------NCVF-APADVTSEKDVQTALALA 80 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECTTSSHHHHHHHHCT------TEEE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcHhHHHHHHHhCC------ceEE-EEcCCCCHHHHHHHHHHH
Confidence 45678999999 9999999999999987 899999988777655555421 1111 1122 21 222
Q ss_pred -----CCcEEEEecccc
Q psy12825 245 -----GSRIVIITAGVR 256 (488)
Q Consensus 245 -----dADiVIitag~~ 256 (488)
..|+||.+++..
T Consensus 81 ~~~~g~id~li~~Ag~~ 97 (265)
T 2o23_A 81 KGKFGRVDVAVNCAGIA 97 (265)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHCCCCCEEEECCccC
Confidence 799999999864
No 275
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.35 E-value=0.042 Score=54.27 Aligned_cols=97 Identities=14% Similarity=0.173 Sum_probs=64.6
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEE
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVII 251 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIi 251 (488)
...+.++|+|||+|.+|..++..+...|. +|..+|++.++++.. .++ ..++....++ +.+++||+||.
T Consensus 153 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~--~V~~~d~~~~~~~~~-~~~--------g~~~~~~~~l~~~l~~aDvVi~ 221 (300)
T 2rir_A 153 YTIHGSQVAVLGLGRTGMTIARTFAALGA--NVKVGARSSAHLARI-TEM--------GLVPFHTDELKEHVKDIDICIN 221 (300)
T ss_dssp SCSTTSEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHH-HHT--------TCEEEEGGGHHHHSTTCSEEEE
T ss_pred CCCCCCEEEEEcccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHH-HHC--------CCeEEchhhHHHHhhCCCEEEE
Confidence 45678899999999999999998887776 899999988765432 111 1122222344 46899999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe-CCch
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS-NPVD 298 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T-NPvd 298 (488)
+... ++ + |. ..+....|.+++|+++ +|.+
T Consensus 222 ~~p~----~~-----i--~~-------~~~~~mk~g~~lin~a~g~~~ 251 (300)
T 2rir_A 222 TIPS----MI-----L--NQ-------TVLSSMTPKTLILDLASRPGG 251 (300)
T ss_dssp CCSS----CC-----B--CH-------HHHTTSCTTCEEEECSSTTCS
T ss_pred CCCh----hh-----h--CH-------HHHHhCCCCCEEEEEeCCCCC
Confidence 9642 11 1 11 1234445788888886 4644
No 276
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=95.35 E-value=0.16 Score=47.46 Aligned_cols=111 Identities=9% Similarity=0.024 Sum_probs=67.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc-------cc
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA-------MS 243 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e-------al 243 (488)
++.++|.|+|+ |.+|..++..|+..|. +|+++|++++.++....++. ..++. ..| .+ .+
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-------~~~~~-~~D~~~~~~~~~~~~~~ 74 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGA--KVVAVTRTNSDLVSLAKECP-------GIEPV-CVDLGDWDATEKALGGI 74 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHST-------TCEEE-ECCTTCHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhcc-------CCCcE-EecCCCHHHHHHHHHHc
Confidence 56678999999 9999999999999986 89999999876654433321 11222 222 21 23
Q ss_pred CCCcEEEEecccccCC---Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeC
Q psy12825 244 EGSRIVIITAGVRSLV---GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 244 ~dADiVIitag~~~k~---G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TN 295 (488)
...|+||.+++..... ..+ ....+..|+.- .+.+.+.+.+....+.+|+++-
T Consensus 75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS 136 (244)
T 1cyd_A 75 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS 136 (244)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcc
Confidence 3579999998864321 111 22334455543 3444444444332456666654
No 277
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=95.35 E-value=0.17 Score=49.05 Aligned_cols=117 Identities=13% Similarity=0.096 Sum_probs=70.7
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc---c----c---
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI---A----M--- 242 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~---e----a--- 242 (488)
.++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... .....+ ...|. + .
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~-~~~Dl~~~~~~~~~~~~ 97 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGA--QCVIASRKMDVLKATAEQISSQT--GNKVHA-IQCDVRDPDMVQNTVSE 97 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH--SSCEEE-EECCTTCHHHHHHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc--CCceEE-EEeCCCCHHHHHHHHHH
Confidence 345678999998 9999999999999986 89999999888776666665421 011111 12232 1 1
Q ss_pred ----cCCCcEEEEecccccCC---Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 ----SEGSRIVIITAGVRSLV---GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 ----l~dADiVIitag~~~k~---G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TN 295 (488)
+...|+||.++|..... ..+ ....+..|+.- .+.+.+.+.+....+.+|+++-
T Consensus 98 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS 164 (302)
T 1w6u_A 98 LIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITT 164 (302)
T ss_dssp HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcc
Confidence 22459999999864321 111 22334455443 3444444443334466676654
No 278
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=95.35 E-value=0.12 Score=50.02 Aligned_cols=112 Identities=17% Similarity=0.206 Sum_probs=71.2
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc---------
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA--------- 241 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e--------- 241 (488)
+.+++.|+|| |.+|..++..|+..|. +|++.|++++.++....++.... .++. ...| .+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA--KILLGARRQARIEAIATEIRDAG-----GTALAQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHTT-----CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHHHHHH
Confidence 3467888898 8999999999999987 89999999998888777776531 1221 1123 21
Q ss_pred --ccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 76 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS 140 (264)
T 3tfo_A 76 VDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGS 140 (264)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcC
Confidence 1347899999998653211 121 223444443 3455555555443 456777653
No 279
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=95.34 E-value=0.14 Score=48.80 Aligned_cols=111 Identities=15% Similarity=0.137 Sum_probs=67.2
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc----ccC--
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA----MSE-- 244 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e----al~-- 244 (488)
++.++|.|+|| |.+|..++..|+..|. +|++.|++++.++....++.. .... ...| .+ .++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~-~~~D~~d~~~v~~~~~~~ 80 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGA--TVAIADLDVMAAQAVVAGLEN------GGFA-VEVDVTKRASVDAAMQKA 80 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTCTT------CCEE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc------CCeE-EEEeCCCHHHHHHHHHHH
Confidence 45678999998 9999999999999987 899999998776654433321 1111 1122 21 222
Q ss_pred -----CCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEe
Q psy12825 245 -----GSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 245 -----dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+.|+||..+|...... .+ ....+..|+. +.+...+.+.+....+.+|+++
T Consensus 81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~is 145 (263)
T 3ak4_A 81 IDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTA 145 (263)
T ss_dssp HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 7999999998643211 11 1223444543 3344445554433245566665
No 280
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=95.33 E-value=0.019 Score=57.51 Aligned_cols=67 Identities=13% Similarity=0.130 Sum_probs=47.7
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEE-EEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc-ccC--CCcEEEE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFC-LIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA-MSE--GSRIVII 251 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~-L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e-al~--dADiVIi 251 (488)
+++||+|||+|.+|...+..|...+-. +|+ ++|+++++++..+..+. +...+|++ .++ ++|+|++
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g----------~~~~~~~~~~l~~~~~D~V~i 71 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAANPDL-ELVVIADPFIEGAQRLAEANG----------AEAVASPDEVFARDDIDGIVI 71 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHTTT----------CEEESSHHHHTTCSCCCEEEE
T ss_pred CceEEEEECCcHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcC----------CceeCCHHHHhcCCCCCEEEE
Confidence 457999999999999988888765322 554 89999987765433221 23446774 455 8999999
Q ss_pred ec
Q psy12825 252 TA 253 (488)
Q Consensus 252 ta 253 (488)
+.
T Consensus 72 ~t 73 (344)
T 3euw_A 72 GS 73 (344)
T ss_dssp CS
T ss_pred eC
Confidence 86
No 281
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=95.28 E-value=0.13 Score=49.04 Aligned_cols=114 Identities=15% Similarity=0.216 Sum_probs=69.7
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c----c---
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A----M--- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e----a--- 242 (488)
++.++|.|+|+ |.+|..++..|+..|. +|+++|++++.++....++.... . .++. ...|. + .
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~--~~~~~~~~D~~~~~~~~~~~~~ 78 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA--HIVLVARQVDRLHEAARSLKEKF--G--VRVLEVAVDVATPEGVDAVVES 78 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH--C--CCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHHhc--C--CceEEEEcCCCCHHHHHHHHHH
Confidence 35578999998 9999999999999986 89999999887776666664320 0 1111 12232 1 1
Q ss_pred ----cCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 ----SEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 ----l~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.+.|++|.++|..... ..+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 79 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS 144 (263)
T 3ai3_A 79 VRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNAS 144 (263)
T ss_dssp HHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECc
Confidence 23799999999865321 1122 223444443 3455555554433 355666653
No 282
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=95.28 E-value=0.098 Score=50.88 Aligned_cols=82 Identities=18% Similarity=0.215 Sum_probs=56.7
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c----cc
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A----MS 243 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e----al 243 (488)
..++.++|.|+|| |.+|..++..|+..|. +|+++|++.+.++....++..........++. ...|. + .+
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 91 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELGS--NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV 91 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence 3456678999999 9999999999999986 89999999888877777775421100112222 22232 1 12
Q ss_pred -------CCCcEEEEecccc
Q psy12825 244 -------EGSRIVIITAGVR 256 (488)
Q Consensus 244 -------~dADiVIitag~~ 256 (488)
...|+||.++|..
T Consensus 92 ~~~~~~~g~id~li~~Ag~~ 111 (303)
T 1yxm_A 92 KSTLDTFGKINFLVNNGGGQ 111 (303)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 2589999999854
No 283
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=95.28 E-value=0.077 Score=50.28 Aligned_cols=47 Identities=17% Similarity=0.197 Sum_probs=38.5
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHH
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDL 222 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL 222 (488)
.++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~ 51 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGA--TVAACDLDRAAAQETVRLL 51 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHTC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHH
Confidence 355678999998 9999999999999986 8999999987776544444
No 284
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=95.27 E-value=0.2 Score=48.76 Aligned_cols=47 Identities=17% Similarity=0.234 Sum_probs=38.8
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEe-CChhHHHHHHHHHh
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLID-SNEDRCKGEMLDLQ 223 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~D-i~~e~l~g~~~dL~ 223 (488)
++.+++.|+|+ |.+|..++..|+..|. +|++.| ++++.++....++.
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~r~~~~~~~~~~~l~ 55 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSAAEANALSATLN 55 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC--eEEEEcCCCHHHHHHHHHHHh
Confidence 34567888898 9999999999999987 899999 99888877666665
No 285
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=95.26 E-value=0.16 Score=48.54 Aligned_cols=112 Identities=15% Similarity=0.163 Sum_probs=67.4
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c----cc--
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A----MS-- 243 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e----al-- 243 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++.+.++....++... .++. ...|. + .+
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~ 85 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGA--KVVIADIADDHGQKVCNNIGSP------DVISFVHCDVTKDEDVRNLVDT 85 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCT------TTEEEEECCTTCHHHHHHHHHH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCChhHHHHHHHHhCCC------CceEEEECCCCCHHHHHHHHHH
Confidence 45678999999 9999999999999986 8999999887666554444211 1221 12232 1 12
Q ss_pred -----CCCcEEEEecccccCC-----Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeC
Q psy12825 244 -----EGSRIVIITAGVRSLV-----GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 244 -----~dADiVIitag~~~k~-----G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+.|+||..++..... ..+ ..+.+..|+.- .+.+.+.+.+. ..+.+|+++-
T Consensus 86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS 153 (278)
T 2bgk_A 86 TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTAS 153 (278)
T ss_dssp HHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEEEECC
T ss_pred HHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCeEEEEee
Confidence 3789999998864311 111 22344555443 34444444332 3456666653
No 286
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=95.26 E-value=0.17 Score=49.07 Aligned_cols=77 Identities=18% Similarity=0.256 Sum_probs=53.6
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c-------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A------- 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e------- 241 (488)
.++.+++.|+|+ |.+|..++..|+..|. +|++.|++++.++....++.... .++. ...|. +
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~d~~~v~~~~~ 93 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGI--AVYGCARDAKNVSAAVDGLRAAG-----HDVDGSSCDVTSTDEVHAAVA 93 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT-----CCEEEEECCTTCHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHHHH
Confidence 345567889998 9999999999999987 89999999988887777776431 1221 12232 1
Q ss_pred ----ccCCCcEEEEeccccc
Q psy12825 242 ----MSEGSRIVIITAGVRS 257 (488)
Q Consensus 242 ----al~dADiVIitag~~~ 257 (488)
.+...|++|..+|...
T Consensus 94 ~~~~~~g~id~lv~nAg~~~ 113 (279)
T 3sju_A 94 AAVERFGPIGILVNSAGRNG 113 (279)
T ss_dssp HHHHHHCSCCEEEECCCCCC
T ss_pred HHHHHcCCCcEEEECCCCCC
Confidence 1236799999998653
No 287
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=95.25 E-value=0.013 Score=53.63 Aligned_cols=102 Identities=11% Similarity=0.119 Sum_probs=66.6
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---ccccCC--CcEE
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IAMSEG--SRIV 249 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~eal~d--ADiV 249 (488)
.+||.|+|| |.+|..++..|+..+...+|++++++++. .+ .++. ...| ++.+.. +|+|
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~--------~~-------~~~~~~~~D~~~~~~~~~~~~d~v 69 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EH-------PRLDNPVGPLAELLPQLDGSIDTA 69 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CC-------TTEECCBSCHHHHGGGCCSCCSEE
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc--------cC-------CCceEEeccccCHHHHHHhhhcEE
Confidence 468999998 99999999999998865589999987653 00 0111 1123 222222 8999
Q ss_pred EEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 250 IITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 250 Iitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
|.+++..........+++..|+.....+++.+.+.... .+|++|
T Consensus 70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 113 (215)
T 2a35_A 70 FCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGAR-HYLVVS 113 (215)
T ss_dssp EECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred EECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCC-EEEEEC
Confidence 99987543222234555667877778888887776433 355554
No 288
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=95.24 E-value=0.14 Score=48.80 Aligned_cols=111 Identities=15% Similarity=0.178 Sum_probs=68.1
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhH--HHHHHHHHhhcCCCCCCCcEE-EcCCc---cc--------
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDR--CKGEMLDLQHGAPFLRSPKIE-SGSDI---AM-------- 242 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~--l~g~~~dL~~~~~~~~~~~v~-~ttd~---ea-------- 242 (488)
+++.|+|+ |.+|..++..|+..|. +|++.|++.+. ++....++.... .++. ...|. ++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~ 75 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADGF--DIAVADLPQQEEQAAETIKLIEAAD-----QKAVFVGLDVTDKANFDSAIDEA 75 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTC--EEEEEECGGGHHHHHHHHHHHHTTT-----CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHHhcC-----CcEEEEEccCCCHHHHHHHHHHH
Confidence 57888998 9999999999999986 89999998876 665555554321 1221 12232 11
Q ss_pred ---cCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 ---SEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 ---l~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+...|++|..+|...... .+ -...+..|+. +.+.+.+.+.+....+.||+++-
T Consensus 76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS 141 (258)
T 3a28_C 76 AEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAAS 141 (258)
T ss_dssp HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECC
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECc
Confidence 237899999998643211 12 1233444543 44555555554443255777653
No 289
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=95.22 E-value=0.14 Score=49.86 Aligned_cols=116 Identities=10% Similarity=0.034 Sum_probs=72.0
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc---------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA--------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e--------- 241 (488)
++.+++.|+|| |.+|.+++..|+..|. +|++.|++++.++....++..... ..-.....| .+
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~ 105 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGY--SVVITGRRPDVLDAAAGEIGGRTG---NIVRAVVCDVGDPDQVAALFAAV 105 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHHS---SCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC---CeEEEEEcCCCCHHHHHHHHHHH
Confidence 45667888898 9999999999999987 899999999888877777754311 110111223 21
Q ss_pred --ccCCCcEEEEecccccCCC----cch---HhhHhhhHH----HHHHHHHHHhccC-CCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSLVG----ETR---LQLVDRNVK----IFKDLIPKIAKGS-PDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k~G----~~r---~dll~~N~~----ii~ei~~~I~~~~-p~a~vIv~TN 295 (488)
.+...|++|.++|.....+ .+. ...+.-|+. +.+.+.+.+.+.. +.+.||+++-
T Consensus 106 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS 173 (281)
T 4dry_A 106 RAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGS 173 (281)
T ss_dssp HHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence 1236799999998643211 121 223444443 4566666666654 3567777764
No 290
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.21 E-value=0.16 Score=48.71 Aligned_cols=114 Identities=15% Similarity=0.172 Sum_probs=71.0
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc--------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA-------- 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e-------- 241 (488)
.++.+++.|+|+ |.+|..++..|+..|. +|++.|++.+.++....++.... ..... ...| .+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~-~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA--DLVLAARTVERLEDVAKQVTDTG---RRALS-VGTDITDDAQVAHLVDE 81 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT---CCEEE-EECCTTCHHHHHHHHHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHHhcC---CcEEE-EEcCCCCHHHHHHHHHH
Confidence 345678999998 8999999999999987 89999999998887777776531 11111 1223 21
Q ss_pred ---ccCCCcEEEEecccccC--C--Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSL--V--GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k--~--G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..++.... + ..+. .+.+.-|+. +.+.+.+.+.+.. +.||+++-
T Consensus 82 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS 147 (264)
T 3ucx_A 82 TMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNS 147 (264)
T ss_dssp HHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECC
T ss_pred HHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECc
Confidence 13478999999876322 1 1121 223444443 3444445554432 56777653
No 291
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.20 E-value=0.02 Score=59.26 Aligned_cols=76 Identities=20% Similarity=0.234 Sum_probs=53.0
Q ss_pred CceEEEEecccchHHHHHHHHHcCCC-CeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCC--Cc
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIY-SNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEG--SR 247 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~-~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~d--AD 247 (488)
++||+|+|||.+|..++..|+..+-. .+|+++|++.++++..+.++.... ......... +|. +.+++ +|
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~--~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG--YGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT--CCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc--CCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 36999999999999999999887633 589999999999988777776421 001111111 122 23555 89
Q ss_pred EEEEecc
Q psy12825 248 IVIITAG 254 (488)
Q Consensus 248 iVIitag 254 (488)
+||.+++
T Consensus 79 vVin~ag 85 (405)
T 4ina_A 79 IVLNIAL 85 (405)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9999975
No 292
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=95.20 E-value=0.049 Score=52.86 Aligned_cols=89 Identities=18% Similarity=0.195 Sum_probs=61.1
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc-CCccccCCCcEEEEeccc
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG-SDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t-td~eal~dADiVIitag~ 255 (488)
|||.|+|| |.+|++++..|..+|. +|+.+.++++. ..+... .+.++++++|.||-.++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~--~V~~l~R~~~~-----------------~~~~~~~~~~~~l~~~d~vihla~~ 61 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGH--EVTLVSRKPGP-----------------GRITWDELAASGLPSCDAAVNLAGE 61 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCT-----------------TEEEHHHHHHHCCCSCSEEEECCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCCc-----------------CeeecchhhHhhccCCCEEEEeccC
Confidence 79999999 9999999999999997 89888875431 122111 123578899999998864
Q ss_pred ccC-----CCc-chHhhHhhhHHHHHHHHHHHhccC
Q psy12825 256 RSL-----VGE-TRLQLVDRNVKIFKDLIPKIAKGS 285 (488)
Q Consensus 256 ~~k-----~G~-~r~dll~~N~~ii~ei~~~I~~~~ 285 (488)
+-. ... ...++...|+...+.+.+.+....
T Consensus 62 ~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~ 97 (298)
T 4b4o_A 62 NILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP 97 (298)
T ss_dssp CSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred cccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC
Confidence 321 111 133455667777777777777664
No 293
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=95.20 E-value=0.1 Score=49.30 Aligned_cols=113 Identities=17% Similarity=0.145 Sum_probs=70.4
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC-ChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---ccc-------
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-NEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IAM------- 242 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di-~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~ea------- 242 (488)
+.++|.|+|| |.+|..++..|+..|. +|++.++ +++.++....++.... .++. ...| .++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 75 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGA--NVVVNYAGNEQKANEVVDEIKKLG-----SDAIAVRADVANAEDVTNMVKQ 75 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHHHHH
Confidence 4567889998 9999999999999986 8999999 8877776666665421 1221 1223 211
Q ss_pred ----cCCCcEEEEecccccCC---Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeCC
Q psy12825 243 ----SEGSRIVIITAGVRSLV---GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 243 ----l~dADiVIitag~~~k~---G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TNP 296 (488)
+.+.|++|..+|..... ..+ ....+..|+.- .+.+.+.+.+.. .+.||+++-.
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~ 142 (246)
T 2uvd_A 76 TVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASV 142 (246)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCT
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCH
Confidence 23799999999865321 111 12334455443 455555565443 3567776643
No 294
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=95.19 E-value=0.17 Score=48.12 Aligned_cols=114 Identities=15% Similarity=0.071 Sum_probs=68.2
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c----cc--
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A----MS-- 243 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e----al-- 243 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... .++. ...|. + .+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 84 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA--VIHTCARNEYELNECLSKWQKKG-----FQVTGSVCDASLRPEREKLMQT 84 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-----CeeEEEECCCCCHHHHHHHHHH
Confidence 45678999998 9999999999999986 89999999887776666665421 1221 12232 1 11
Q ss_pred ------CCCcEEEEecccccCC---Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeCC
Q psy12825 244 ------EGSRIVIITAGVRSLV---GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 244 ------~dADiVIitag~~~k~---G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TNP 296 (488)
.+.|+||.+++..... ..+ ....+..|+.- .+.+.+.+.+.. ...+|+++-.
T Consensus 85 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~ 152 (266)
T 1xq1_A 85 VSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSI 152 (266)
T ss_dssp HHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC--
T ss_pred HHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccc
Confidence 5789999999864321 112 22334555543 333444444443 3456666543
No 295
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=95.15 E-value=0.15 Score=49.92 Aligned_cols=114 Identities=19% Similarity=0.183 Sum_probs=70.5
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc---------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA--------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e--------- 241 (488)
++.++|.|+|| |.+|..++..|+..|. +|++.|++++.++....++.... ....+. ..| .+
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~-~~Dv~d~~~v~~~~~~~ 105 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGA--TIVFNDINQELVDRGMAAYKAAG---INAHGY-VCDVTDEDGIQAMVAQI 105 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHTT---CCCEEE-ECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---CeEEEE-EecCCCHHHHHHHHHHH
Confidence 45578999998 9999999999999986 89999999888776666665421 111221 223 21
Q ss_pred --ccCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|.++|...... .+ -...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 106 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS 170 (291)
T 3cxt_A 106 ESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICS 170 (291)
T ss_dssp HHHTCCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHHcCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECc
Confidence 1235899999998653211 11 1223444443 4455555555433 355666653
No 296
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=95.15 E-value=0.11 Score=48.96 Aligned_cols=115 Identities=21% Similarity=0.247 Sum_probs=70.0
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc-------cc
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI-------AM 242 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~-------ea 242 (488)
...+.++|.|+|| |.+|.+++..|+..|. +|++.|++++.++....++... ..+... +|. +.
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~~~~D~~~~~~~~~~~~~ 81 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGS--KVIISGSNEEKLKSLGNALKDN------YTIEVCNLANKEECSNLISK 81 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCSS------EEEEECCTTSHHHHHHHHHT
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhccC------ccEEEcCCCCHHHHHHHHHh
Confidence 4556788999998 9999999999999986 8999999998887666555421 111111 121 23
Q ss_pred cCCCcEEEEecccccCC------CcchHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 243 SEGSRIVIITAGVRSLV------GETRLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 243 l~dADiVIitag~~~k~------G~~r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
+.+.|++|..+|..... ...-...+..|+. +.+.+.+.+.+. ..+.+|+++-.
T Consensus 82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS~ 144 (249)
T 3f9i_A 82 TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-RYGRIINISSI 144 (249)
T ss_dssp CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCC
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEccH
Confidence 44789999999864321 1122334444543 344445544443 34567777644
No 297
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=95.13 E-value=0.25 Score=47.89 Aligned_cols=115 Identities=10% Similarity=0.167 Sum_probs=70.0
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC-ChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---ccc------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-NEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IAM------ 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di-~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~ea------ 242 (488)
.+.+++.|+|| |.+|.+++..|+..|. +|+++|. +++.++....++.... .++. ...| .++
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~ 99 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF--DIAITGIGDAEGVAPVIAELSGLG-----ARVIFLRADLADLSSHQATVD 99 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCHHHHHHHHHHHHHTT-----CCEEEEECCTTSGGGHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhcC-----CcEEEEEecCCCHHHHHHHHH
Confidence 44567888998 9999999999999987 8999996 7777776666665431 1221 1223 211
Q ss_pred -----cCCCcEEEEeccccc---CC--Ccc---hHhhHhhhHH----HHHHHHHHHhccC--CCcEEEEEeCC
Q psy12825 243 -----SEGSRIVIITAGVRS---LV--GET---RLQLVDRNVK----IFKDLIPKIAKGS--PDCILLIISNP 296 (488)
Q Consensus 243 -----l~dADiVIitag~~~---k~--G~~---r~dll~~N~~----ii~ei~~~I~~~~--p~a~vIv~TNP 296 (488)
+...|++|..+|... .+ ..+ -...+.-|+. +.+.+.+.+.+.. +.+.||+++-.
T Consensus 100 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~ 172 (280)
T 4da9_A 100 AVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSV 172 (280)
T ss_dssp HHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_pred HHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcch
Confidence 237899999998731 11 112 1233445544 4456666665543 24567777643
No 298
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=95.12 E-value=0.17 Score=50.03 Aligned_cols=115 Identities=14% Similarity=0.212 Sum_probs=71.2
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCC------------hhHHHHHHHHHhhcCCCCCCCcEE-EcCC
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSN------------EDRCKGEMLDLQHGAPFLRSPKIE-SGSD 239 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~------------~e~l~g~~~dL~~~~~~~~~~~v~-~ttd 239 (488)
.++.+++.|+|+ |.+|..++..|+..|. +|+++|++ .+.++.....+.... .++. ...|
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D 115 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGA--DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-----RRIIARQAD 115 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-----CCEEEEECC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC--eEEEEecccccccccccccCHHHHHHHHHHHHhcC-----CeEEEEECC
Confidence 345567888898 9999999999999987 89999986 555655555554321 1222 2223
Q ss_pred c---c-----------ccCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 240 I---A-----------MSEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 240 ~---e-----------al~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
. + .+...|++|..+|..... ..+. ...+..|+. +.+.+.+.+.+....+.||+++-
T Consensus 116 v~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS 195 (317)
T 3oec_A 116 VRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSS 195 (317)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECc
Confidence 2 1 123789999999865321 1222 233445543 45566666665555677777764
No 299
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=95.12 E-value=0.13 Score=48.28 Aligned_cols=113 Identities=14% Similarity=0.181 Sum_probs=64.3
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEE-eCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---cc----c--
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLI-DSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---AM----S-- 243 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~-Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---ea----l-- 243 (488)
+.++|.|+|+ |.+|..++..|+..|. +|+++ +.+++.++....++.... .++. ...|. ++ +
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~--~V~~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 76 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGA--NIVLNGSPASTSLDATAEEFKAAG-----INVVVAKGDVKNPEDVENMVKT 76 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECTTCSHHHHHHHHHHHTT-----CCEEEEESCTTSHHHHHHHHHH
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCcCHHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHHHHH
Confidence 4578999998 9999999999999986 88888 566666665555554321 1221 12232 21 2
Q ss_pred -----CCCcEEEEecccccCC------CcchHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeCC
Q psy12825 244 -----EGSRIVIITAGVRSLV------GETRLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 244 -----~dADiVIitag~~~k~------G~~r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TNP 296 (488)
.+.|+||.+++..... .....+.+..|+.- .+.+.+.+.+. ..+.+|+++-.
T Consensus 77 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~ 143 (247)
T 2hq1_A 77 AMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-KSGKIINITSI 143 (247)
T ss_dssp HHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECC-
T ss_pred HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCh
Confidence 3789999999864321 11123345556554 34444444433 23556776644
No 300
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=95.12 E-value=0.27 Score=46.64 Aligned_cols=117 Identities=19% Similarity=0.209 Sum_probs=72.7
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc----CCc--------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG----SDI-------- 240 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t----td~-------- 240 (488)
.++.+++.|+|+ |.+|..++..|+..|. +|+++|++++.++....++..... ....+... +|.
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~ 84 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGA--TVILLGRNEEKLRQVASHINEETG--RQPQWFILDLLTCTSENCQQLAQ 84 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHHS--CCCEEEECCTTTCCHHHHHHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhcC--CCceEEEEecccCCHHHHHHHHH
Confidence 356678999998 9999999999999987 899999999888877777654311 01111111 121
Q ss_pred ---cccCCCcEEEEecccccC--C--Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 241 ---AMSEGSRIVIITAGVRSL--V--GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 241 ---eal~dADiVIitag~~~k--~--G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.+...|++|..+|.... + ..+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS 152 (252)
T 3f1l_A 85 RIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSS 152 (252)
T ss_dssp HHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECC
T ss_pred HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECC
Confidence 123478999999986321 1 1222 223445543 4455555555543 455666654
No 301
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=95.11 E-value=0.15 Score=51.97 Aligned_cols=118 Identities=17% Similarity=0.213 Sum_probs=71.1
Q ss_pred hhhHHHHHHHHHHHH-hhhC------CCCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhh
Q psy12825 152 QTMARDAVSTVDRLL-SQVA------PSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQH 224 (488)
Q Consensus 152 k~la~eivlid~~~~-~e~~------~~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~ 224 (488)
-.+++.+...+.... ++.. .......++|+|||.|.||..+|..+..-|. +|..+|++....+. ..++.
T Consensus 132 L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~-~~~~g- 207 (351)
T 3jtm_A 132 LILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGC--NLLYHDRLQMAPEL-EKETG- 207 (351)
T ss_dssp HHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCC--EEEEECSSCCCHHH-HHHHC-
T ss_pred HHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCC--EEEEeCCCccCHHH-HHhCC-
Confidence 357777777664432 1110 0134577899999999999999998876666 89999987533321 11211
Q ss_pred cCCCCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 225 GAPFLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 225 ~~~~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+....++ +.+++||+|+++..... .++ .++ | .+ .+....|.+++|+++.
T Consensus 208 ---------~~~~~~l~ell~~aDvV~l~~Plt~---~t~-~li--~----~~---~l~~mk~gailIN~aR 257 (351)
T 3jtm_A 208 ---------AKFVEDLNEMLPKCDVIVINMPLTE---KTR-GMF--N----KE---LIGKLKKGVLIVNNAR 257 (351)
T ss_dssp ---------CEECSCHHHHGGGCSEEEECSCCCT---TTT-TCB--S----HH---HHHHSCTTEEEEECSC
T ss_pred ---------CeEcCCHHHHHhcCCEEEECCCCCH---HHH-Hhh--c----HH---HHhcCCCCCEEEECcC
Confidence 1223455 46899999999963211 111 111 1 11 2333457899999874
No 302
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.10 E-value=0.0033 Score=63.09 Aligned_cols=32 Identities=25% Similarity=0.552 Sum_probs=30.4
Q ss_pred CcEEEEecchhHHHHHHHHHhhhhHHHHHHHH
Q psy12825 131 QKITVVGAGQVGMACTYSILTQTMARDAVSTV 162 (488)
Q Consensus 131 ~ki~vvg~g~vg~~~a~~~~~k~la~eivlid 162 (488)
.||+|||+|+||.++++.++.+++++|++++|
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~D 38 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIID 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 59999999999999999999999999999987
No 303
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=95.08 E-value=0.11 Score=52.80 Aligned_cols=117 Identities=16% Similarity=0.192 Sum_probs=69.4
Q ss_pred hhhHHHHHHHHHHHH-hhhC-----------CCCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHH
Q psy12825 152 QTMARDAVSTVDRLL-SQVA-----------PSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEM 219 (488)
Q Consensus 152 k~la~eivlid~~~~-~e~~-----------~~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~ 219 (488)
-.+++.+...++... ++.. .......++|+|||.|.||..++..+...|. +|..+|++.+.. ..
T Consensus 131 L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~--~V~~~d~~~~~~--~~ 206 (347)
T 1mx3_A 131 LNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGF--NVLFYDPYLSDG--VE 206 (347)
T ss_dssp HHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHHHHTTTC--EEEEECTTSCTT--HH
T ss_pred HHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHHHHHCCC--EEEEECCCcchh--hH
Confidence 457777776664421 1110 0124577899999999999999998876665 899999865431 11
Q ss_pred HHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 220 LDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 220 ~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+.. +....++ +.+++||+|+++..... .++ .++ | . +.+....|.+++|+++.
T Consensus 207 ~~~g----------~~~~~~l~ell~~aDvV~l~~P~t~---~t~-~li--~----~---~~l~~mk~gailIN~ar 260 (347)
T 1mx3_A 207 RALG----------LQRVSTLQDLLFHSDCVTLHCGLNE---HNH-HLI--N----D---FTVKQMRQGAFLVNTAR 260 (347)
T ss_dssp HHHT----------CEECSSHHHHHHHCSEEEECCCCCT---TCT-TSB--S----H---HHHTTSCTTEEEEECSC
T ss_pred hhcC----------CeecCCHHHHHhcCCEEEEcCCCCH---HHH-HHh--H----H---HHHhcCCCCCEEEECCC
Confidence 1110 1122345 45889999999863211 011 111 1 1 22344467888888863
No 304
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.08 E-value=0.0027 Score=63.81 Aligned_cols=32 Identities=34% Similarity=0.537 Sum_probs=30.2
Q ss_pred CcEEEEecchhHHHHHHHHHhhhhHHHHHHHH
Q psy12825 131 QKITVVGAGQVGMACTYSILTQTMARDAVSTV 162 (488)
Q Consensus 131 ~ki~vvg~g~vg~~~a~~~~~k~la~eivlid 162 (488)
.||+|||+|+||.++||+++.+++++|++++|
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D 32 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVD 32 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 38999999999999999999999999999987
No 305
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=95.08 E-value=0.051 Score=54.11 Aligned_cols=111 Identities=15% Similarity=0.178 Sum_probs=66.8
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcC-CCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccC-----CC
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQG-IYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSE-----GS 246 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~-l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~-----dA 246 (488)
++.++|.|+|| |.+|..++..|+..| . +|+++|.+..... ...+... .....+.-.... +.++ ++
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~--~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~ 116 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTK--FVNLVDL---NIADYMDKEDFLIQIMAGEEFGDV 116 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCC--CEEEEECCSSGGG--GGGTTTS---CCSEEEEHHHHHHHHHTTCCCSSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCc--EEEEEecCCCcch--hhcccCc---eEeeecCcHHHHHHHHhhcccCCC
Confidence 34578999999 999999999999987 5 8999998654311 0111110 000111100111 2344 59
Q ss_pred cEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 247 RIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 247 DiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
|+||.+++..........+.+..|+.-...+.+.+.+... .+|++|
T Consensus 117 d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~--r~V~~S 162 (357)
T 2x6t_A 117 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYAS 162 (357)
T ss_dssp CEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEE
T ss_pred CEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence 9999998764432334556677888888888888877654 455554
No 306
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=95.07 E-value=0.24 Score=47.56 Aligned_cols=116 Identities=11% Similarity=0.129 Sum_probs=70.5
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c------
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A------ 241 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e------ 241 (488)
...+.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... . .++. ...|. +
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~--~~~~~~~~Dl~~~~~v~~~~ 90 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGC--SVVVASRNLEEASEAAQKLTEKY--G--VETMAFRCDVSNYEEVKKLL 90 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH--C--CCEEEEECCTTCHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc--C--CeEEEEEcCCCCHHHHHHHH
Confidence 4455678999998 9999999999999986 89999999888776666662211 0 1111 12232 1
Q ss_pred -----ccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 -----MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 -----al~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 91 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS 158 (267)
T 1vl8_A 91 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGS 158 (267)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECC
T ss_pred HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECC
Confidence 1237899999998653211 111 223444543 3344455554433 345666653
No 307
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.06 E-value=0.097 Score=51.97 Aligned_cols=37 Identities=24% Similarity=0.397 Sum_probs=32.4
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCCh
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNE 212 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~ 212 (488)
.+..||.|||+|.+|+.++..|+..|+ .+|.|+|.|.
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGV-G~i~lvD~D~ 70 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGI-GKLLLFDYDK 70 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCB
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCC-CEEEEECCCc
Confidence 455699999999999999999999986 5899999765
No 308
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=95.06 E-value=0.23 Score=48.15 Aligned_cols=112 Identities=19% Similarity=0.242 Sum_probs=69.7
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCcc----------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIA---------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~e---------- 241 (488)
++.+++.|+|+ |.+|..++..|+..|. +|+++|++++.++....++... ...... +|.+
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGC--HVLCADIDGDAADAAATKIGCG------AAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHCSS------CEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHcCCc------ceEEEecCCCHHHHHHHHHHHH
Confidence 44567888898 9999999999999987 8999999998887666555211 111111 1221
Q ss_pred -ccCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 -MSEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 -al~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|..... ..+. ...+..|+. +.+.+.+.+.+. ..+.||+++-
T Consensus 99 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS 162 (277)
T 3gvc_A 99 AAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-GGGAIVNLSS 162 (277)
T ss_dssp HHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence 234789999999864321 1222 234455554 345555555443 3566777754
No 309
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=95.05 E-value=0.085 Score=52.49 Aligned_cols=112 Identities=11% Similarity=0.155 Sum_probs=70.1
Q ss_pred hhhHHHHHHHHHHH-HhhhCCC---CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC
Q psy12825 152 QTMARDAVSTVDRL-LSQVAPS---IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP 227 (488)
Q Consensus 152 k~la~eivlid~~~-~~e~~~~---~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~ 227 (488)
-.+++.+...+... .++.... .....++|+|||.|.||..+|..+...|. +|..+|++.+ +. ..
T Consensus 95 L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~--~V~~~dr~~~--~~------~~-- 162 (303)
T 1qp8_A 95 LAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAALGA--QVRGFSRTPK--EG------PW-- 162 (303)
T ss_dssp HHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHTTC--EEEEECSSCC--CS------SS--
T ss_pred HHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHCCC--EEEEECCCcc--cc------Cc--
Confidence 45777777776543 2222111 24577899999999999999998877676 8999998764 11 10
Q ss_pred CCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 228 FLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 228 ~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
....++ +.+++||+|+++..... .-..++ | .+.+....|.+++|+++.
T Consensus 163 -------~~~~~l~ell~~aDvV~l~~P~~~----~t~~~i--~-------~~~l~~mk~gailin~sr 211 (303)
T 1qp8_A 163 -------RFTNSLEEALREARAAVCALPLNK----HTRGLV--K-------YQHLALMAEDAVFVNVGR 211 (303)
T ss_dssp -------CCBSCSHHHHTTCSEEEECCCCST----TTTTCB--C-------HHHHTTSCTTCEEEECSC
T ss_pred -------ccCCCHHHHHhhCCEEEEeCcCch----HHHHHh--C-------HHHHhhCCCCCEEEECCC
Confidence 012345 56899999999963211 111111 1 123344567898888874
No 310
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=95.04 E-value=0.19 Score=48.64 Aligned_cols=113 Identities=16% Similarity=0.256 Sum_probs=70.6
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE-cCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES-GSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~-ttd~---e-------- 241 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++... . ++.. ..|. +
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~--~~~~~~~Dv~d~~~v~~~~~~ 98 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGA--RVFICARDAEACADTATRLSAY----G--DCQAIPADLSSEAGARRLAQA 98 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHTTS----S--CEEECCCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----C--ceEEEEeeCCCHHHHHHHHHH
Confidence 34568999998 9999999999999986 8999999988777666666421 1 2221 1221 1
Q ss_pred ---ccCCCcEEEEecccccCC---Ccc---hHhhHhhhHH----HHHHHHHHHhccCC---CcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLV---GET---RLQLVDRNVK----IFKDLIPKIAKGSP---DCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~---G~~---r~dll~~N~~----ii~ei~~~I~~~~p---~a~vIv~TN 295 (488)
.+...|++|..+|..... ..+ -...+..|+. +.+.+.+.+.+... .+.||+++-
T Consensus 99 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS 168 (276)
T 2b4q_A 99 LGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGS 168 (276)
T ss_dssp HHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECC
T ss_pred HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECC
Confidence 134789999999864321 111 2234445543 34555666654432 156777654
No 311
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=95.03 E-value=0.018 Score=57.10 Aligned_cols=68 Identities=9% Similarity=0.033 Sum_probs=45.9
Q ss_pred CCCceEEEEecccchHH-HHHHHHHcCCCCeEE-EEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcccc-CCCcEEEE
Q psy12825 175 SPDQKITVVGAGQVGMA-CTYSILTQGIYSNFC-LIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMS-EGSRIVII 251 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~-ia~~La~~~l~~el~-L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal-~dADiVIi 251 (488)
|+++||+|||+|.+|.. ++..+....- .+|+ ++|+++++++..+.... . . ..+|++++ .++|+|++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~-~~lvav~d~~~~~~~~~~~~~g-~-------~--~~~~~~~l~~~~D~V~i 71 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASD-WTLQGAWSPTRAKALPICESWR-I-------P--YADSLSSLAASCDAVFV 71 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSS-EEEEEEECSSCTTHHHHHHHHT-C-------C--BCSSHHHHHTTCSEEEE
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCC-eEEEEEECCCHHHHHHHHHHcC-C-------C--ccCcHHHhhcCCCEEEE
Confidence 45689999999999986 7777754321 2555 99999988765443321 0 1 34566655 68999999
Q ss_pred ec
Q psy12825 252 TA 253 (488)
Q Consensus 252 ta 253 (488)
+.
T Consensus 72 ~t 73 (319)
T 1tlt_A 72 HS 73 (319)
T ss_dssp CS
T ss_pred eC
Confidence 85
No 312
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=95.02 E-value=0.13 Score=49.61 Aligned_cols=113 Identities=13% Similarity=0.175 Sum_probs=71.9
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE-cCC---cc--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES-GSD---IA-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~-ttd---~e-------- 241 (488)
++.+++.|+|+ |.+|..++..|+..|. +|++.|++++.++....++.... .++.. ..| .+
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 96 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGA--RILINGTDPSRVAQTVQEFRNVG-----HDAEAVAFDVTSESEIIEAFAR 96 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHTT-----CCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-----CceEEEEcCCCCHHHHHHHHHH
Confidence 45667888898 9999999999999987 89999999998887777776531 12221 122 21
Q ss_pred ---ccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|...... .+. ...+..|+. +.+...+.+.+.. .+.||+++-
T Consensus 97 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS 162 (271)
T 4ibo_A 97 LDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGS 162 (271)
T ss_dssp HHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcc
Confidence 1237899999998653211 122 223444543 4455555555443 355676653
No 313
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.01 E-value=0.058 Score=50.64 Aligned_cols=98 Identities=14% Similarity=0.174 Sum_probs=59.7
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcC-CCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---c----ccc
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQG-IYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---I----AMS 243 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~-l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~----eal 243 (488)
..+.+++|.|+|| |.+|..++..|+..| . +|++++++++.+.. .. .....+. ..| . +++
T Consensus 19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~--~V~~~~R~~~~~~~-------~~--~~~~~~~-~~Dl~d~~~~~~~~ 86 (236)
T 3qvo_A 19 FQGHMKNVLILGAGGQIARHVINQLADKQTI--KQTLFARQPAKIHK-------PY--PTNSQII-MGDVLNHAALKQAM 86 (236)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHTTCTTE--EEEEEESSGGGSCS-------SC--CTTEEEE-ECCTTCHHHHHHHH
T ss_pred ecCcccEEEEEeCCcHHHHHHHHHHHhCCCc--eEEEEEcChhhhcc-------cc--cCCcEEE-EecCCCHHHHHHHh
Confidence 3445678999998 999999999999888 5 89999998765431 10 1111222 223 2 358
Q ss_pred CCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 244 EGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 244 ~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+++|+||.+++.. ..+ ...+.+.+.+++.... .+|++|-
T Consensus 87 ~~~D~vv~~a~~~------~~~------~~~~~~~~~~~~~~~~-~iV~iSS 125 (236)
T 3qvo_A 87 QGQDIVYANLTGE------DLD------IQANSVIAAMKACDVK-RLIFVLS 125 (236)
T ss_dssp TTCSEEEEECCST------THH------HHHHHHHHHHHHTTCC-EEEEECC
T ss_pred cCCCEEEEcCCCC------chh------HHHHHHHHHHHHcCCC-EEEEEec
Confidence 8999999987531 111 1234556666655433 4555553
No 314
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=94.99 E-value=0.13 Score=48.14 Aligned_cols=114 Identities=15% Similarity=0.158 Sum_probs=68.8
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCC-----eEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c----c
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYS-----NFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A----M 242 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~-----el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e----a 242 (488)
.++|.|+|+ |.+|..++..|+..|... +|+++|++.+.++....++... ..++. ...|. + .
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~ 76 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-----GALTDTITADISDMADVRRL 76 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-----TCEEEEEECCTTSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc-----CCeeeEEEecCCCHHHHHHH
Confidence 357899998 999999999999887522 7999999988777666666432 11222 12232 1 1
Q ss_pred -------cCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 243 -------SEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 243 -------l~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
+.+.|+||.++|...... .+ ....+..|+. +.+.+.+.+.+. ..+.+|+++-.
T Consensus 77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~ 146 (244)
T 2bd0_A 77 TTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSV 146 (244)
T ss_dssp HHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred HHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEEecc
Confidence 237999999998653211 11 2233444543 334444444433 34567777643
No 315
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.98 E-value=0.18 Score=48.70 Aligned_cols=78 Identities=10% Similarity=0.244 Sum_probs=53.7
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c----c---
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A----M--- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e----a--- 242 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... ....++. ...|. + .
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGA--NVTITGRSSERLEETRQIILKSG--VSEKQVNSVVADVTTEDGQDQIINS 79 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT--CCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHcC--CCCcceEEEEecCCCHHHHHHHHHH
Confidence 44567888898 9999999999999987 89999999988876666665321 0000222 22232 1 1
Q ss_pred ----cCCCcEEEEecccc
Q psy12825 243 ----SEGSRIVIITAGVR 256 (488)
Q Consensus 243 ----l~dADiVIitag~~ 256 (488)
+...|++|..+|..
T Consensus 80 ~~~~~g~iD~lv~nAg~~ 97 (280)
T 1xkq_A 80 TLKQFGKIDVLVNNAGAA 97 (280)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 23689999999864
No 316
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=94.98 E-value=0.25 Score=49.16 Aligned_cols=47 Identities=17% Similarity=0.234 Sum_probs=38.6
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEe-CChhHHHHHHHHHh
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLID-SNEDRCKGEMLDLQ 223 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~D-i~~e~l~g~~~dL~ 223 (488)
++.++|.|+|+ |.+|..++..|+..|. +|++.| ++++.++....++.
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~--~Vv~~~~r~~~~~~~~~~~l~ 92 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSAAEANALSATLN 92 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHH
Confidence 34567888898 9999999999999987 899999 99888877666664
No 317
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=94.97 E-value=0.35 Score=46.48 Aligned_cols=114 Identities=16% Similarity=0.142 Sum_probs=70.8
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
++.+++.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... .++. ...|. +
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 91 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA--RVYTCSRNEKELDECLEIWREKG-----LNVEGSVCDLLSRTERDKLMQT 91 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-----CceEEEECCCCCHHHHHHHHHH
Confidence 45578999998 9999999999999986 89999999888776666665421 1221 12232 1
Q ss_pred ---cc-CCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 242 ---MS-EGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 242 ---al-~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
.+ ...|++|..+|..... ..+. ...+..|+. +.+.+.+.+.+.. .+.||+++-.
T Consensus 92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~ 159 (273)
T 1ae1_A 92 VAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSI 159 (273)
T ss_dssp HHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCG
T ss_pred HHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCH
Confidence 12 5789999999864321 1122 223344543 3444444554433 3567777643
No 318
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.97 E-value=0.044 Score=55.71 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=53.2
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc-cccCCCcEEEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI-AMSEGSRIVII 251 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~-eal~dADiVIi 251 (488)
.++.+|.|+|+|.+|..++..+...|. +|+++|+++++++.......+. ..+... .+. +.++++|+||.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga--~V~v~dr~~~r~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~DvVI~ 236 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLFGSR------VELLYSNSAEIETAVAEADLLIG 236 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGGG------SEEEECCHHHHHHHHHTCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhhCce------eEeeeCCHHHHHHHHcCCCEEEE
Confidence 456899999999999999998888786 8999999998887543322221 111111 122 45779999999
Q ss_pred eccccc
Q psy12825 252 TAGVRS 257 (488)
Q Consensus 252 tag~~~ 257 (488)
+.+.+.
T Consensus 237 ~~~~~~ 242 (361)
T 1pjc_A 237 AVLVPG 242 (361)
T ss_dssp CCCCTT
T ss_pred CCCcCC
Confidence 987543
No 319
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=94.97 E-value=0.022 Score=57.39 Aligned_cols=116 Identities=11% Similarity=0.136 Sum_probs=70.2
Q ss_pred hhhHHHHHHH-HHHH-HhhhCC---CCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcC
Q psy12825 152 QTMARDAVST-VDRL-LSQVAP---SIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGA 226 (488)
Q Consensus 152 k~la~eivli-d~~~-~~e~~~---~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~ 226 (488)
-.+++.+... +... .++... ......++|+|||.|.||..+|..+..-|. +|..||++.+..+.
T Consensus 107 L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~--------- 175 (324)
T 3evt_A 107 LSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASALGM--HVIGVNTTGHPADH--------- 175 (324)
T ss_dssp HHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSCCCCTT---------
T ss_pred HHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhCCC--EEEEECCCcchhHh---------
Confidence 3566776665 5432 111111 134567899999999999999998877676 89999987643211
Q ss_pred CCCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 227 PFLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 227 ~~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
........++ +.+++||+|+++.... .+...++ | .+.+....|.+++|+++-
T Consensus 176 ----~~~~~~~~~l~ell~~aDvV~l~lPlt----~~t~~li--~-------~~~l~~mk~gailIN~aR 228 (324)
T 3evt_A 176 ----FHETVAFTATADALATANFIVNALPLT----PTTHHLF--S-------TELFQQTKQQPMLINIGR 228 (324)
T ss_dssp ----CSEEEEGGGCHHHHHHCSEEEECCCCC----GGGTTCB--S-------HHHHHTCCSCCEEEECSC
T ss_pred ----HhhccccCCHHHHHhhCCEEEEcCCCc----hHHHHhc--C-------HHHHhcCCCCCEEEEcCC
Confidence 0122233455 4688999999986211 0111111 1 122444567899999873
No 320
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=94.97 E-value=0.18 Score=48.11 Aligned_cols=112 Identities=10% Similarity=0.124 Sum_probs=71.6
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc----cc--
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA----MS-- 243 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e----al-- 243 (488)
++.+++.|+|| |.+|..++..|+..|. +|++.|++++.++....++.... .++. ...| .+ .+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 77 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF--TVFAGRRNGEKLAPLVAEIEAAG-----GRIVARSLDARNEDEVTAFLNA 77 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHTT-----CEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-----CeEEEEECcCCCHHHHHHHHHH
Confidence 35578899998 8999999999999987 89999999998887777776531 1222 1223 21 12
Q ss_pred ----CCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEe
Q psy12825 244 ----EGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 244 ----~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~T 294 (488)
...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+.. .+.||+++
T Consensus 78 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~is 141 (252)
T 3h7a_A 78 ADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTG 141 (252)
T ss_dssp HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEE
T ss_pred HHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEC
Confidence 25799999998654211 121 223444433 4455555555543 45566665
No 321
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=94.96 E-value=0.2 Score=48.26 Aligned_cols=113 Identities=19% Similarity=0.174 Sum_probs=70.3
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCcc---------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIA--------- 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~e--------- 241 (488)
.++.+++.|+|+ |.+|.+++..|+..|. +|++.|++++.++....++... ...... +|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~~~~Dv~~~~~v~~~~~~~ 79 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGA--RVVLADLPETDLAGAAASVGRG------AVHHVVDLTNEVSVRALIDFT 79 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECTTSCHHHHHHHHCTT------CEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhCCC------eEEEECCCCCHHHHHHHHHHH
Confidence 345678899998 9999999999999987 8999999988887666555211 111111 1211
Q ss_pred --ccCCCcEEEEecccccC-CC----cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSL-VG----ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k-~G----~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..++.... .. .+ ....+..|+. +.+.+.+.+.+. ..+.||+++-
T Consensus 80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS 146 (271)
T 3tzq_B 80 IDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNISS 146 (271)
T ss_dssp HHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECC
Confidence 22378999999986522 11 12 1234555654 344444444543 3466777753
No 322
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=94.93 E-value=0.21 Score=47.51 Aligned_cols=115 Identities=10% Similarity=0.122 Sum_probs=70.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc----ccC-
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA----MSE- 244 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e----al~- 244 (488)
++.++|.|+|+ |.+|..++..|+..|. +|+++|++++.++....++.... . ..++. ...| .+ .++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~-~~~~~~~~~D~~~~~~v~~~~~~ 79 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA--RLLLFSRNREKLEAAASRIASLV--S-GAQVDIVAGDIREPGDIDRLFEK 79 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHS--T-TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--C-CCeEEEEEccCCCHHHHHHHHHH
Confidence 34568999998 9999999999999986 89999999888776666665321 0 10121 1223 21 122
Q ss_pred -----CCcEEEEecccccCC---Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeC
Q psy12825 245 -----GSRIVIITAGVRSLV---GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 245 -----dADiVIitag~~~k~---G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.|++|..+|..... ..+ ....+..|+.- .+.+.+.+.+.. .+.||+++-
T Consensus 80 ~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS 144 (260)
T 2z1n_A 80 ARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGS 144 (260)
T ss_dssp HHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECc
Confidence 499999999864321 111 22334555443 355555555443 355666653
No 323
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=94.91 E-value=0.032 Score=55.75 Aligned_cols=70 Identities=9% Similarity=0.094 Sum_probs=47.1
Q ss_pred CCCCceEEEEecccchHHHHHHHH-HcCCCCe-EEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-cC--CCcE
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSIL-TQGIYSN-FCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-SE--GSRI 248 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La-~~~l~~e-l~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l~--dADi 248 (488)
.++++||+|||+|.+|...+..+. ...- .+ +.++|+++++++..+..+ . .. ...+|+++ ++ ++|+
T Consensus 5 ~~~~~~v~iiG~G~ig~~~~~~l~~~~~~-~~~vav~d~~~~~~~~~a~~~------g-~~--~~~~~~~~~l~~~~~D~ 74 (346)
T 3cea_A 5 TRKPLRAAIIGLGRLGERHARHLVNKIQG-VKLVAACALDSNQLEWAKNEL------G-VE--TTYTNYKDMIDTENIDA 74 (346)
T ss_dssp CCCCEEEEEECCSTTHHHHHHHHHHTCSS-EEEEEEECSCHHHHHHHHHTT------C-CS--EEESCHHHHHTTSCCSE
T ss_pred CCCcceEEEEcCCHHHHHHHHHHHhcCCC-cEEEEEecCCHHHHHHHHHHh------C-CC--cccCCHHHHhcCCCCCE
Confidence 356789999999999998888876 3322 25 468899998776433221 1 11 23457743 54 7999
Q ss_pred EEEec
Q psy12825 249 VIITA 253 (488)
Q Consensus 249 VIita 253 (488)
|+++.
T Consensus 75 V~i~t 79 (346)
T 3cea_A 75 IFIVA 79 (346)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 99985
No 324
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=94.91 E-value=0.066 Score=48.71 Aligned_cols=105 Identities=10% Similarity=0.101 Sum_probs=66.9
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcC---Cc----cccC---CC
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS---DI----AMSE---GS 246 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~tt---d~----eal~---dA 246 (488)
++|.|+|+ |.+|..++..|+.+ +|+++|++++.++....++.. . .... |+ +.++ +.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~~~~~~~~~~~~--------~-~~~~D~~~~~~~~~~~~~~~~i 67 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH----DLLLSGRRAGALAELAREVGA--------R-ALPADLADELEAKALLEEAGPL 67 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS----EEEEECSCHHHHHHHHHHHTC--------E-ECCCCTTSHHHHHHHHHHHCSE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHHHHHHHHHhccC--------c-EEEeeCCCHHHHHHHHHhcCCC
Confidence 47899999 99999999988877 899999998877655444421 1 1111 22 2233 89
Q ss_pred cEEEEecccccCC------CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 247 RIVIITAGVRSLV------GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 247 DiVIitag~~~k~------G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
|+||.+++..... .......+..|+.-...+.+.+.+. +.+.+|+++-.
T Consensus 68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS~ 122 (207)
T 2yut_A 68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGAY 122 (207)
T ss_dssp EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECCC
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcCh
Confidence 9999999864321 1123345666776666666666332 33556666643
No 325
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.91 E-value=0.1 Score=55.39 Aligned_cols=71 Identities=15% Similarity=0.198 Sum_probs=52.1
Q ss_pred CceEEEEecccchHH-HHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEeccc
Q psy12825 177 DQKITVVGAGQVGMA-CTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAGV 255 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~-ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag~ 255 (488)
.+||.|||.|..|.+ +|..|...|. +|...|.++... ...|... ...+....+.+.+.++|+||.+.++
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~--~V~~~D~~~~~~---~~~l~~~-----gi~~~~g~~~~~~~~~d~vV~Spgi 91 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGY--QISGSDLAPNSV---TQHLTAL-----GAQIYFHHRPENVLDASVVVVSTAI 91 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTC--EEEEECSSCCHH---HHHHHHT-----TCEEESSCCGGGGTTCSEEEECTTS
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCC--eEEEEECCCCHH---HHHHHHC-----CCEEECCCCHHHcCCCCEEEECCCC
Confidence 569999999999996 8988888887 899999865422 2234432 1244444456778999999999877
Q ss_pred cc
Q psy12825 256 RS 257 (488)
Q Consensus 256 ~~ 257 (488)
+.
T Consensus 92 ~~ 93 (494)
T 4hv4_A 92 SA 93 (494)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 326
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=94.91 E-value=0.2 Score=48.33 Aligned_cols=115 Identities=15% Similarity=0.157 Sum_probs=71.0
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCcc----------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIA---------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~e---------- 241 (488)
++.+++.|+|| |.+|..++..|+..|. +|+++|++++.++....++..... ....... +|.+
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~ 100 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGA--MVIGTATTEAGAEGIGAAFKQAGL---EGRGAVLNVNDATAVDALVESTL 100 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHTC---CCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEEeCCCHHHHHHHHHHHH
Confidence 44567888898 9999999999999987 899999999888877777765321 1111111 1221
Q ss_pred -ccCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 -MSEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 -al~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|..... ..+. ...+.-|+. +.+.+.+.+.+. ..+.||+++-
T Consensus 101 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS 164 (270)
T 3ftp_A 101 KEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNITS 164 (270)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECc
Confidence 233789999999865321 1122 223445543 344445455443 3466777653
No 327
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.91 E-value=0.049 Score=54.10 Aligned_cols=114 Identities=11% Similarity=0.094 Sum_probs=69.2
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChh----HHHHHHHHHhhcCCCCCCCcEEEcCC---c----cc
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNED----RCKGEMLDLQHGAPFLRSPKIESGSD---I----AM 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e----~l~g~~~dL~~~~~~~~~~~v~~ttd---~----ea 242 (488)
+++++|.|+|| |.+|+.++..|+..|. +|+++|++.. .++.....+.... .....+. ..| . +.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~Dl~d~~~~~~~ 99 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ--KVVGLDNFATGHQRNLDEVRSLVSEKQ--WSNFKFI-QGDIRNLDDCNNA 99 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCHHHHHHHHHHSCHHH--HTTEEEE-ECCTTSHHHHHHH
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCccchhhHHHHhhhccccc--CCceEEE-ECCCCCHHHHHHH
Confidence 34579999999 9999999999999886 8999998542 2332221111100 0011121 223 2 35
Q ss_pred cCCCcEEEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 243 SEGSRIVIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 243 l~dADiVIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
++++|+||.+++..... .....+.+..|+.-...+.+.+.+.... .+|++|
T Consensus 100 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~v~~S 152 (352)
T 1sb8_A 100 CAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQ-SFTYAA 152 (352)
T ss_dssp HTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEE
T ss_pred hcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence 78999999998753211 0123345667777777788877765433 355554
No 328
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=94.90 E-value=0.2 Score=48.43 Aligned_cols=114 Identities=14% Similarity=0.154 Sum_probs=71.0
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc---cc----c---
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI---AM----S--- 243 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~---ea----l--- 243 (488)
++.+++.|+|+ |.+|..++..|+..|. +|++.|++++.++....++.... .... ....|. ++ +
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~-~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGA--HVILHGVKPGSTAAVQQRIIASG---GTAQ-ELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSTTTTHHHHHHHHHTT---CCEE-EEECCTTSTTHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC---CeEE-EEEecCCCHHHHHHHHHHH
Confidence 34567888898 9999999999999987 89999999888877777775421 1111 122232 11 1
Q ss_pred ---CCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 244 ---EGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 244 ---~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS 168 (275)
T 4imr_A 105 EAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGS 168 (275)
T ss_dssp HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECC
Confidence 36899999998643211 122 223444543 4455555555443 456777653
No 329
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=94.89 E-value=0.15 Score=48.60 Aligned_cols=111 Identities=15% Similarity=0.207 Sum_probs=68.8
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---ccc--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IAM-------- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~ea-------- 242 (488)
++.++|.|+|| |.+|..++..|+..|. +|++.|++++.++....++... ..+ ...| .++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~-~~~D~~~~~~~~~~~~~~ 73 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGA--RVVLADVLDEEGAATARELGDA------ARY-QHLDVTIEEDWQRVVAYA 73 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTTGGG------EEE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCc------eeE-EEecCCCHHHHHHHHHHH
Confidence 45678999998 9999999999999987 8999999988776544443111 011 1122 211
Q ss_pred ---cCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 ---SEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 ---l~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.+.|++|..+|...... .+ ....+..|+. ..+.+.+.+.+.. .+.||+++-
T Consensus 74 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS 138 (254)
T 1hdc_A 74 REEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISS 138 (254)
T ss_dssp HHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECc
Confidence 237999999998653211 11 1233444543 3356666665543 355676653
No 330
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=94.89 E-value=0.04 Score=54.50 Aligned_cols=69 Identities=12% Similarity=0.136 Sum_probs=49.5
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
.+.+++.|+|+|.+|.++++.|...|. .+|.+++++.++++..+.++ ......+.+++ ++|+||.+..
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~-~~v~v~nRt~~ka~~La~~~----------~~~~~~~l~~l-~~DivInaTp 187 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFA-KDIYVVTRNPEKTSEIYGEF----------KVISYDELSNL-KGDVIINCTP 187 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTC-SEEEEEESCHHHHHHHCTTS----------EEEEHHHHTTC-CCSEEEECSS
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCC-CEEEEEeCCHHHHHHHHHhc----------CcccHHHHHhc-cCCEEEECCc
Confidence 456799999999999999999988774 58999999988766543221 11112233335 8999999864
Q ss_pred c
Q psy12825 255 V 255 (488)
Q Consensus 255 ~ 255 (488)
.
T Consensus 188 ~ 188 (282)
T 3fbt_A 188 K 188 (282)
T ss_dssp T
T ss_pred c
Confidence 3
No 331
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=94.89 E-value=0.019 Score=57.09 Aligned_cols=67 Identities=15% Similarity=0.218 Sum_probs=46.5
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeE-EEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-c-CCCcEEEEec
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNF-CLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-S-EGSRIVIITA 253 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el-~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l-~dADiVIita 253 (488)
++||+|||+|.+|..++..+...+-. ++ .++|.++++++. +.+.. . . ....+|+++ + .++|+|+++.
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~-~~~~v~d~~~~~~~~----~~~~~--~-~--~~~~~~~~~~l~~~~D~V~i~t 70 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEY-QLVAIYSRKLETAAT----FASRY--Q-N--IQLFDQLEVFFKSSFDLVYIAS 70 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSE-EEEEEECSSHHHHHH----HGGGS--S-S--CEEESCHHHHHTSSCSEEEECS
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCe-EEEEEEeCCHHHHHH----HHHHc--C-C--CeEeCCHHHHhCCCCCEEEEeC
Confidence 46999999999999988888765422 44 588999876653 22221 1 1 133467754 5 7899999995
No 332
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.86 E-value=0.0041 Score=62.48 Aligned_cols=32 Identities=25% Similarity=0.494 Sum_probs=30.8
Q ss_pred CcEEEEecchhHHHHHHHHHhhhhHHHHHHHH
Q psy12825 131 QKITVVGAGQVGMACTYSILTQTMARDAVSTV 162 (488)
Q Consensus 131 ~ki~vvg~g~vg~~~a~~~~~k~la~eivlid 162 (488)
.||+|||+|.||.++|+.++.+++.+|++++|
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~D 39 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLID 39 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 59999999999999999999999999999998
No 333
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=94.85 E-value=0.11 Score=49.98 Aligned_cols=97 Identities=12% Similarity=0.146 Sum_probs=62.9
Q ss_pred ceEEEEec-ccchHHHHHHHHHc-CCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCCCcEE
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQ-GIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEGSRIV 249 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~-~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~dADiV 249 (488)
|||.|+|| |.+|..++..|... +. +|++++++++++.. +.. ....+... +|. ++++++|+|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~--~V~~~~R~~~~~~~----~~~-----~~v~~~~~D~~d~~~l~~~~~~~d~v 69 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHID--HFHIGVRNVEKVPD----DWR-----GKVSVRQLDYFNQESMVEAFKGMDTV 69 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCT--TEEEEESSGGGSCG----GGB-----TTBEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCC--cEEEEECCHHHHHH----hhh-----CCCEEEEcCCCCHHHHHHHHhCCCEE
Confidence 58999998 99999999998776 55 89999998765431 111 11222221 122 368999999
Q ss_pred EEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 250 IITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 250 Iitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
|.+++.... ...|+...+.+++.+.+..... +|++|
T Consensus 70 i~~a~~~~~--------~~~~~~~~~~l~~aa~~~gv~~-iv~~S 105 (289)
T 3e48_A 70 VFIPSIIHP--------SFKRIPEVENLVYAAKQSGVAH-IIFIG 105 (289)
T ss_dssp EECCCCCCS--------HHHHHHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred EEeCCCCcc--------chhhHHHHHHHHHHHHHcCCCE-EEEEc
Confidence 999864321 1235666677777777765443 44443
No 334
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=94.85 E-value=0.28 Score=47.64 Aligned_cols=112 Identities=13% Similarity=0.228 Sum_probs=71.4
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c---------
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A--------- 241 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e--------- 241 (488)
+.+.+.|+|| |.+|..++..|+..|. +|+++|++.+.++....++.... .++. ...|. +
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV--TVGALGRTRTEVEEVADEIVGAG-----GQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHTTTT-----CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEEccCCCHHHHHHHHHHH
Confidence 4567888998 9999999999999987 89999999988887777775421 1221 22232 1
Q ss_pred --ccCCCcEEEEecccccC--C--Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSL--V--GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k--~--G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|.... + ..+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 100 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS 165 (283)
T 3v8b_A 100 VLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSS 165 (283)
T ss_dssp HHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcC
Confidence 12378999999986422 2 1222 233445543 4455555555543 456777654
No 335
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=94.85 E-value=0.32 Score=47.34 Aligned_cols=115 Identities=10% Similarity=0.105 Sum_probs=69.1
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHH-HHhhcCCCCCCCcEE-EcCCc---c------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEML-DLQHGAPFLRSPKIE-SGSDI---A------ 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~-dL~~~~~~~~~~~v~-~ttd~---e------ 241 (488)
.++.++|.|+|+ |.+|.+++..|+..|. +|++.|++.+....... .+... ..++. ...|. +
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~ 116 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGA--NIAIAYLDEEGDANETKQYVEKE-----GVKCVLLPGDLSDEQHCKDIV 116 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTT-----TCCEEEEESCTTSHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHH
Confidence 456678999998 9999999999999987 89999998754332222 33321 11222 22232 1
Q ss_pred -----ccCCCcEEEEecccccCCC----cc---hHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeC
Q psy12825 242 -----MSEGSRIVIITAGVRSLVG----ET---RLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISN 295 (488)
Q Consensus 242 -----al~dADiVIitag~~~k~G----~~---r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TN 295 (488)
.+...|++|..++.....+ .+ -...+.-|+.-...+.+.+..+ ...+.||+++-
T Consensus 117 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 117 QETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 1236899999988643211 12 2334566665555555555544 23456777653
No 336
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=94.84 E-value=0.085 Score=53.55 Aligned_cols=134 Identities=13% Similarity=0.134 Sum_probs=77.5
Q ss_pred CcEEEEec-chhHHHHH-HHH-HhhhhHHHHHHHHHHHH--hhhCC-----CCCCCCceEEEEecccchHHHHHHHHHcC
Q psy12825 131 QKITVVGA-GQVGMACT-YSI-LTQTMARDAVSTVDRLL--SQVAP-----SIESPDQKITVVGAGQVGMACTYSILTQG 200 (488)
Q Consensus 131 ~ki~vvg~-g~vg~~~a-~~~-~~k~la~eivlid~~~~--~e~~~-----~~~~~~~KIaIIGAG~vG~~ia~~La~~~ 200 (488)
..|.|.-+ |.-.-+.| |++ ++-.+++.+...+.... +++.- ......++|+|||.|.||..+|..+..-|
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~G 171 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAMG 171 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhCC
Confidence 35655543 22223333 333 22357788877776543 21100 03446789999999999999999887666
Q ss_pred CCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHH
Q psy12825 201 IYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIP 279 (488)
Q Consensus 201 l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~ 279 (488)
. +|..||++.+. .... . +... ++ +.+++||+|+++..... .++ .++ |. +
T Consensus 172 ~--~V~~~d~~~~~------~~~~------~--~~~~-~l~ell~~aDvV~l~~Plt~---~t~-~li--~~-------~ 221 (343)
T 2yq5_A 172 A--KVIAYDVAYNP------EFEP------F--LTYT-DFDTVLKEADIVSLHTPLFP---STE-NMI--GE-------K 221 (343)
T ss_dssp C--EEEEECSSCCG------GGTT------T--CEEC-CHHHHHHHCSEEEECCCCCT---TTT-TCB--CH-------H
T ss_pred C--EEEEECCChhh------hhhc------c--cccc-CHHHHHhcCCEEEEcCCCCH---HHH-HHh--hH-------H
Confidence 6 89999997653 1111 1 1222 55 46889999999863211 111 111 11 2
Q ss_pred HHhccCCCcEEEEEe
Q psy12825 280 KIAKGSPDCILLIIS 294 (488)
Q Consensus 280 ~I~~~~p~a~vIv~T 294 (488)
.+....|.+++|+++
T Consensus 222 ~l~~mk~gailIN~a 236 (343)
T 2yq5_A 222 QLKEMKKSAYLINCA 236 (343)
T ss_dssp HHHHSCTTCEEEECS
T ss_pred HHhhCCCCcEEEECC
Confidence 234446789999887
No 337
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.82 E-value=0.033 Score=57.60 Aligned_cols=73 Identities=19% Similarity=0.288 Sum_probs=52.8
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
.+.++|+|||+|.+|..++..+...|. .+|+++|++.++++..+.++.. .+....++ +.+.++|+||.+.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~-~~V~v~~r~~~ra~~la~~~g~--------~~~~~~~l~~~l~~aDvVi~at 235 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGV-RAVLVANRTYERAVELARDLGG--------EAVRFDELVDHLARSDVVVSAT 235 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCC-SEEEEECSSHHHHHHHHHHHTC--------EECCGGGHHHHHHTCSEEEECC
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHcCC--------ceecHHhHHHHhcCCCEEEEcc
Confidence 467899999999999999998887774 4899999998877555554421 11111233 4578999999997
Q ss_pred ccc
Q psy12825 254 GVR 256 (488)
Q Consensus 254 g~~ 256 (488)
+.+
T Consensus 236 ~~~ 238 (404)
T 1gpj_A 236 AAP 238 (404)
T ss_dssp SSS
T ss_pred CCC
Confidence 543
No 338
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.82 E-value=0.29 Score=46.53 Aligned_cols=108 Identities=11% Similarity=0.086 Sum_probs=65.7
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc---------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA--------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e--------- 241 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++. +....++.. .+ ...| .+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~-~~~~~~~~~--------~~-~~~D~~~~~~~~~~~~~~ 71 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGA--LVALCDLRPEG-KEVAEAIGG--------AF-FQVDLEDERERVRFVEEA 71 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTTH-HHHHHHHTC--------EE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChhH-HHHHHHhhC--------CE-EEeeCCCHHHHHHHHHHH
Confidence 45578999998 9999999999999986 89999998776 444444321 11 1122 11
Q ss_pred --ccCCCcEEEEecccccCC---Ccc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSLV---GET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k~---G~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|..... ..+ -...+..|+. +.+.+.+.+.+. ..+.||+++-
T Consensus 72 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS 136 (256)
T 2d1y_A 72 AYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVAS 136 (256)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence 134789999999864321 112 1234455554 334444444443 2456777653
No 339
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=94.80 E-value=0.046 Score=53.66 Aligned_cols=112 Identities=18% Similarity=0.146 Sum_probs=68.8
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChh--HHHHHHHHHhhcCCCCCCCcEE-EcCC---c----cccC
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNED--RCKGEMLDLQHGAPFLRSPKIE-SGSD---I----AMSE 244 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e--~l~g~~~dL~~~~~~~~~~~v~-~ttd---~----eal~ 244 (488)
+.|||.|+|| |.+|.+++..|+..+...+|+.+|++.. ..+ .+.+.. ...++. ...| . +.+.
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~----~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~ 74 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPA----NLKDLE---DDPRYTFVKGDVADYELVKELVR 74 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG----GGTTTT---TCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchh----HHhhhc---cCCceEEEEcCCCCHHHHHHHhh
Confidence 4578999998 9999999999998863348999997531 111 111110 011222 1223 2 2457
Q ss_pred CCcEEEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 245 GSRIVIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 245 dADiVIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
++|+||.+++..... .....+++..|+.-...+.+.+.+......+|++|
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S 126 (336)
T 2hun_A 75 KVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVS 126 (336)
T ss_dssp TCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 899999998754210 01234456778888888888877764334566665
No 340
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=94.79 E-value=0.12 Score=48.20 Aligned_cols=113 Identities=12% Similarity=0.198 Sum_probs=68.9
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEE-eCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc---cc----------
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLI-DSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI---AM---------- 242 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~-Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~---ea---------- 242 (488)
++|.|+|| |.+|..++..|+..|. +|+++ +++++.++....++.... .........|. +.
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G~--~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDGF--ALAIHYGQNREKAEEVAEEARRRG---SPLVAVLGANLLEAEAATALVHQAAE 76 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTC--EEEEEESSCHHHHHHHHHHHHHTT---CSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC---CceEEEEeccCCCHHHHHHHHHHHHH
Confidence 57889998 9999999999999886 78887 888887776655554321 11112122232 11
Q ss_pred -cCCCcEEEEecccccCC---Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeCC
Q psy12825 243 -SEGSRIVIITAGVRSLV---GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 243 -l~dADiVIitag~~~k~---G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TNP 296 (488)
+.+.|+||..++..... ..+ ....+..|+.- .+.+.+.+.+.. ...+|+++-.
T Consensus 77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~ 140 (245)
T 2ph3_A 77 VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSV 140 (245)
T ss_dssp HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCT
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeCh
Confidence 34789999999865321 111 22334455443 555555555443 3556776643
No 341
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=94.79 E-value=0.16 Score=49.08 Aligned_cols=110 Identities=19% Similarity=0.232 Sum_probs=67.8
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---c-----------c
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---I-----------A 241 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~-----------e 241 (488)
+++.|+|| |.+|..++..|+..|. +|+++|++++.++....++... .++. ...| . +
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~ 93 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGW--SLVLTGRREERLQALAGELSAK------TRVLPLTLDVRDRAAMSAAVDNLPE 93 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTT------SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhcC------CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 57888898 9999999999999986 8999999988887666665431 1111 1122 1 1
Q ss_pred ccCCCcEEEEecccccC--C--Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 MSEGSRIVIITAGVRSL--V--GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 al~dADiVIitag~~~k--~--G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|.... + ..+. ...+..|+. ..+.+.+.+.+......||+++-
T Consensus 94 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS 158 (272)
T 2nwq_A 94 EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS 158 (272)
T ss_dssp GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 12345999999986432 1 1111 223444543 34555666655443315666653
No 342
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=94.78 E-value=0.027 Score=55.44 Aligned_cols=74 Identities=18% Similarity=0.161 Sum_probs=45.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEE-EEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc-ccCCCcEEEE
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFC-LIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA-MSEGSRIVII 251 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~-L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e-al~dADiVIi 251 (488)
|+++||+|+|| |.||..++..+...+-. +|+ .+|.+.....+ .|+....... ..+..++|++ .+.++|+||.
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~-eLv~~~d~~~~~~~G--~d~gel~g~~--~gv~v~~dl~~ll~~~DVVID 79 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDA-TLVGALDRTGSPQLG--QDAGAFLGKQ--TGVALTDDIERVCAEADYLID 79 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTE-EEEEEBCCTTCTTTT--SBTTTTTTCC--CSCBCBCCHHHHHHHCSEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEEecCccccc--ccHHHHhCCC--CCceecCCHHHHhcCCCEEEE
Confidence 67799999995 99999998888766422 444 46876432221 2222221111 1344456774 4778999998
Q ss_pred ec
Q psy12825 252 TA 253 (488)
Q Consensus 252 ta 253 (488)
..
T Consensus 80 fT 81 (272)
T 4f3y_A 80 FT 81 (272)
T ss_dssp CS
T ss_pred cC
Confidence 74
No 343
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=94.78 E-value=0.11 Score=48.74 Aligned_cols=113 Identities=15% Similarity=0.129 Sum_probs=68.7
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc----cc--
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA----MS-- 243 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e----al-- 243 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... . .++. ...| .+ .+
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~--~~~~~~~~D~~~~~~~~~~~~~ 78 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS--TVIITGTSGERAKAVAEEIANKY--G--VKAHGVEMNLLSEESINKAFEE 78 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHH--C--CCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhc--C--CceEEEEccCCCHHHHHHHHHH
Confidence 45678899998 9999999999999886 89999999887776655554311 0 1121 1222 21 12
Q ss_pred -----CCCcEEEEecccccCCC---cc---hHhhHhhhHHHH----HHHHHHHhccCCCcEEEEEe
Q psy12825 244 -----EGSRIVIITAGVRSLVG---ET---RLQLVDRNVKIF----KDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 244 -----~dADiVIitag~~~k~G---~~---r~dll~~N~~ii----~ei~~~I~~~~p~a~vIv~T 294 (488)
.+.|+||.+++...... .+ ..+.+..|+.-. +.+.+.+.+.. .+.+|+++
T Consensus 79 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~s 143 (248)
T 2pnf_A 79 IYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNIS 143 (248)
T ss_dssp HHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEEC
T ss_pred HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEc
Confidence 37999999998653211 11 223445555433 44444444332 34566665
No 344
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=94.77 E-value=0.034 Score=56.27 Aligned_cols=72 Identities=19% Similarity=0.203 Sum_probs=48.2
Q ss_pred CCCCCceEEEEecccchHHHHHHHH-HcCCCCeE-EEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-cC--CCc
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSIL-TQGIYSNF-CLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-SE--GSR 247 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La-~~~l~~el-~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l~--dAD 247 (488)
..|+++||+|||+|.+|...+..+. ...-. +| .++|+++++++..+..+.- .....+|+++ +. +.|
T Consensus 19 ~~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~-~lvav~d~~~~~~~~~a~~~g~--------~~~~~~~~~~ll~~~~~D 89 (357)
T 3ec7_A 19 FQGMTLKAGIVGIGMIGSDHLRRLANTVSGV-EVVAVCDIVAGRAQAALDKYAI--------EAKDYNDYHDLINDKDVE 89 (357)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTCTTE-EEEEEECSSTTHHHHHHHHHTC--------CCEEESSHHHHHHCTTCC
T ss_pred cCCCeeeEEEECCcHHHHHHHHHHHhhCCCc-EEEEEEeCCHHHHHHHHHHhCC--------CCeeeCCHHHHhcCCCCC
Confidence 4456789999999999998888887 33222 54 4899999888765544420 1223467743 43 699
Q ss_pred EEEEec
Q psy12825 248 IVIITA 253 (488)
Q Consensus 248 iVIita 253 (488)
+|+++.
T Consensus 90 ~V~i~t 95 (357)
T 3ec7_A 90 VVIITA 95 (357)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 999985
No 345
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.77 E-value=0.08 Score=53.41 Aligned_cols=107 Identities=14% Similarity=0.086 Sum_probs=69.8
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCCCcE
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEGSRI 248 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~dADi 248 (488)
++++|.|+|| |.+|.+++..|+..+. +|+++|++.+.... +.. ....+... +|. ++++++|+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~-----~~v~~~~~Dl~d~~~~~~~~~~~d~ 96 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH--YVIASDWKKNEHMT----EDM-----FCDEFHLVDLRVMENCLKVTEGVDH 96 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCSSSC----GGG-----TCSEEEECCTTSHHHHHHHHTTCSE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC--eEEEEECCCccchh----hcc-----CCceEEECCCCCHHHHHHHhCCCCE
Confidence 5679999999 9999999999999886 89999987643211 000 01122221 122 35789999
Q ss_pred EEEecccccCC---CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 249 VIITAGVRSLV---GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 249 VIitag~~~k~---G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
||.+++..... .....+.+..|+.-...+.+.+.+..... +|++|
T Consensus 97 Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~-~V~~S 144 (379)
T 2c5a_A 97 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKR-FFYAS 144 (379)
T ss_dssp EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSE-EEEEE
T ss_pred EEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEe
Confidence 99998754211 12345566778888888888877664443 45444
No 346
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=94.77 E-value=0.069 Score=52.52 Aligned_cols=98 Identities=14% Similarity=0.125 Sum_probs=64.6
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEE
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVII 251 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIi 251 (488)
...+.++|+|||+|.+|..++..+...|. +|..+|++.++++.. .++ ........+. +.++++|+||+
T Consensus 151 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~--~V~~~dr~~~~~~~~-~~~--------g~~~~~~~~l~~~l~~aDvVi~ 219 (293)
T 3d4o_A 151 FTIHGANVAVLGLGRVGMSVARKFAALGA--KVKVGARESDLLARI-AEM--------GMEPFHISKAAQELRDVDVCIN 219 (293)
T ss_dssp SCSTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHH-HHT--------TSEEEEGGGHHHHTTTCSEEEE
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHH-HHC--------CCeecChhhHHHHhcCCCEEEE
Confidence 34577899999999999999998887776 899999988755422 111 1122212344 45899999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe-CCchh
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS-NPVDV 299 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T-NPvdi 299 (488)
+... ++ + |. ..+....|.+++|+++ +|.++
T Consensus 220 ~~p~----~~-----i--~~-------~~l~~mk~~~~lin~ar~~~~~ 250 (293)
T 3d4o_A 220 TIPA----LV-----V--TA-------NVLAEMPSHTFVIDLASKPGGT 250 (293)
T ss_dssp CCSS----CC-----B--CH-------HHHHHSCTTCEEEECSSTTCSB
T ss_pred CCCh----HH-----h--CH-------HHHHhcCCCCEEEEecCCCCCC
Confidence 9631 11 1 11 1223345788899988 66543
No 347
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.76 E-value=0.46 Score=45.11 Aligned_cols=116 Identities=11% Similarity=0.061 Sum_probs=68.1
Q ss_pred CCCceEEEEec-cc--chHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc-------
Q psy12825 175 SPDQKITVVGA-GQ--VGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~--vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e------- 241 (488)
++.+++.|+|| |. +|..++..|+..|. +|++.|+++...+. ..++..... .....+. ..| .+
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~-~~~~~~~~~-~~~~~~~-~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA--RLIFTYAGERLEKS-VHELAGTLD-RNDSIIL-PCDVTNDAEIETCFA 79 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHH-HHHHHHTSS-SCCCEEE-ECCCSSSHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEecCchHHHHH-HHHHHHhcC-CCCceEE-eCCCCCHHHHHHHHH
Confidence 45678999998 66 99999999999987 89999998654443 333433211 0012222 223 21
Q ss_pred ----ccCCCcEEEEecccccC-----C--Ccch---HhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeC
Q psy12825 242 ----MSEGSRIVIITAGVRSL-----V--GETR---LQLVDRNVKIFKDLIPKIAKG-SPDCILLIISN 295 (488)
Q Consensus 242 ----al~dADiVIitag~~~k-----~--G~~r---~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TN 295 (488)
.+...|++|..++.... + ..+. ...+..|+.-...+.+.+..+ .+.+.||+++-
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 12367999999886531 1 1111 233455555444555555544 34567777764
No 348
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=94.76 E-value=0.047 Score=55.40 Aligned_cols=58 Identities=17% Similarity=0.304 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHhhh-C---CCCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCCh
Q psy12825 154 MARDAVSTVDRLLSQV-A---PSIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNE 212 (488)
Q Consensus 154 la~eivlid~~~~~e~-~---~~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~ 212 (488)
||+..+.+.-|+++=. . +....+..||.|||+|.+|+.++..|+..|+ .+|.|+|.+.
T Consensus 7 ~~~~~~~lnl~lm~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGV-g~ItlvD~D~ 68 (340)
T 3rui_A 7 IADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNGT 68 (340)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCB
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEecCCE
Confidence 5555555554433321 1 1123356799999999999999999999997 5899999743
No 349
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=94.76 E-value=0.21 Score=46.63 Aligned_cols=113 Identities=11% Similarity=0.078 Sum_probs=67.6
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCcc-------ccC
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIA-------MSE 244 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~e-------al~ 244 (488)
++.++|.|+|+ |.+|..++..|+..|. +|+++|++++.++....++.. .++... +|++ .+.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-------~~~~~~D~~~~~~~~~~~~~~~ 75 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGA--RVVAVSRTQADLDSLVRECPG-------IEPVCVDLGDWEATERALGSVG 75 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHSTT-------CEEEECCTTCHHHHHHHHTTCC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHcCC-------CCEEEEeCCCHHHHHHHHHHcC
Confidence 34578999999 9999999999999886 899999998776644333311 122211 1221 233
Q ss_pred CCcEEEEecccccCCC---cc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeCC
Q psy12825 245 GSRIVIITAGVRSLVG---ET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 245 dADiVIitag~~~k~G---~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TNP 296 (488)
..|+||.+++...... .+ ....+..|+.- .+.+.+.+.+....+.+|+++-.
T Consensus 76 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~ 137 (244)
T 3d3w_A 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ 137 (244)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred CCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCch
Confidence 5899999988643211 11 22344555543 34444444443324567777643
No 350
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.75 E-value=0.26 Score=48.20 Aligned_cols=114 Identities=15% Similarity=0.238 Sum_probs=69.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c----c---
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A----M--- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e----a--- 242 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... ....++. ...|. + .
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKAG--VPAEKINAVVADVTEASGQDDIINT 99 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CCCceEEEEecCCCCHHHHHHHHHH
Confidence 34567888898 9999999999999987 89999999988876666665421 0000222 12232 1 1
Q ss_pred ----cCCCcEEEEecccccCCC-----cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEe
Q psy12825 243 ----SEGSRIVIITAGVRSLVG-----ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 243 ----l~dADiVIitag~~~k~G-----~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+...|++|..+|...... .+ ....+..|+. +.+.+.+.+.+.. +.||+++
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~is 165 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVS 165 (297)
T ss_dssp HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEEC
T ss_pred HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEc
Confidence 237899999998643211 11 1223444443 3444555554432 5677765
No 351
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=94.74 E-value=0.025 Score=56.94 Aligned_cols=68 Identities=13% Similarity=0.130 Sum_probs=47.4
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeE-EEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc-cc--CCCcEEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNF-CLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA-MS--EGSRIVI 250 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el-~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e-al--~dADiVI 250 (488)
++++||+|||+|.+|...+..+...+- .+| .++|+++++++..+.... . . ..+|++ .+ .++|+|+
T Consensus 3 ~~~~~vgiiG~G~~g~~~~~~l~~~~~-~~lvav~d~~~~~~~~~~~~~g-~-------~--~~~~~~~~l~~~~~D~V~ 71 (354)
T 3db2_A 3 YNPVGVAAIGLGRWAYVMADAYTKSEK-LKLVTCYSRTEDKREKFGKRYN-C-------A--GDATMEALLAREDVEMVI 71 (354)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSS-EEEEEEECSSHHHHHHHHHHHT-C-------C--CCSSHHHHHHCSSCCEEE
T ss_pred CCcceEEEEccCHHHHHHHHHHHhCCC-cEEEEEECCCHHHHHHHHHHcC-C-------C--CcCCHHHHhcCCCCCEEE
Confidence 356799999999999988887765432 254 488999988776544331 1 1 145774 35 6799999
Q ss_pred Eec
Q psy12825 251 ITA 253 (488)
Q Consensus 251 ita 253 (488)
++.
T Consensus 72 i~t 74 (354)
T 3db2_A 72 ITV 74 (354)
T ss_dssp ECS
T ss_pred EeC
Confidence 985
No 352
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=94.74 E-value=0.12 Score=50.09 Aligned_cols=103 Identities=16% Similarity=0.185 Sum_probs=66.3
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC-----c-cccCCCcEEE
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD-----I-AMSEGSRIVI 250 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd-----~-eal~dADiVI 250 (488)
|||.|+|| |.+|++++..|+..|. +|+.+|++.+...... + ....+. ..| . +++++ |+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~----~-----~~~~~~-~~Dl~d~~~~~~~~~-d~vi 67 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY--EVVVVDNLSSGRREFV----N-----PSAELH-VRDLKDYSWGAGIKG-DVVF 67 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCCSSCCGGGS----C-----TTSEEE-CCCTTSTTTTTTCCC-SEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC--EEEEEeCCCCCchhhc----C-----CCceEE-ECccccHHHHhhcCC-CEEE
Confidence 58999999 9999999999999887 8999998654322110 0 111111 122 1 34556 9999
Q ss_pred EecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 251 ITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 251 itag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
.+++.+... .......+..|+.-...+.+.+.+..... +|++|
T Consensus 68 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-iv~~S 112 (312)
T 3ko8_A 68 HFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRT-VVFAS 112 (312)
T ss_dssp ECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCE-EEEEE
T ss_pred ECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEeC
Confidence 998754221 12344556778888888888887765443 44444
No 353
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=94.74 E-value=0.15 Score=48.49 Aligned_cols=112 Identities=16% Similarity=0.266 Sum_probs=69.9
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc---------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA--------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e--------- 241 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++... ... ...| .+
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~-~~~D~~~~~~~~~~~~~~ 77 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGA--KVVIVDRDKAGAERVAGEIGDA------ALA-VAADISKEADVDAAVEAA 77 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCTT------EEE-EECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhCCc------eEE-EEecCCCHHHHHHHHHHH
Confidence 35578999998 8999999999999986 8999999998887666555321 111 1122 11
Q ss_pred --ccCCCcEEEEecccccCCC----cch---HhhHhhhHH----HHHHHHHHHhccC---CCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSLVG----ETR---LQLVDRNVK----IFKDLIPKIAKGS---PDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k~G----~~r---~dll~~N~~----ii~ei~~~I~~~~---p~a~vIv~TN 295 (488)
.+...|++|.++|....++ .+. ...+..|+. +.+.+.+.+.+.. ..+.||+++-
T Consensus 78 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS 147 (261)
T 3n74_A 78 LSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVAS 147 (261)
T ss_dssp HHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred HHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCc
Confidence 1236899999998654221 121 223344433 4555556655542 2456777664
No 354
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=94.73 E-value=0.18 Score=50.50 Aligned_cols=88 Identities=13% Similarity=0.112 Sum_probs=58.4
Q ss_pred hhhHHHHHHHHHHH-HhhhCC-------CCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeC-ChhHHHHHHHHH
Q psy12825 152 QTMARDAVSTVDRL-LSQVAP-------SIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDS-NEDRCKGEMLDL 222 (488)
Q Consensus 152 k~la~eivlid~~~-~~e~~~-------~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di-~~e~l~g~~~dL 222 (488)
-.+++.+...++.. .++... ......++|+|||.|.||..++..+...|. +|+.+|+ +.+... ..++
T Consensus 113 L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~--~~~~ 188 (320)
T 1gdh_A 113 LGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDM--DIDYFDTHRASSSD--EASY 188 (320)
T ss_dssp HHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSCCCHHH--HHHH
T ss_pred HHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCC--EEEEECCCCcChhh--hhhc
Confidence 45777777766443 222211 034567899999999999999998876565 8999999 776421 1111
Q ss_pred hhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 223 QHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 223 ~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
. +....++ +.+++||+|+++.
T Consensus 189 g----------~~~~~~l~ell~~aDvVil~~ 210 (320)
T 1gdh_A 189 Q----------ATFHDSLDSLLSVSQFFSLNA 210 (320)
T ss_dssp T----------CEECSSHHHHHHHCSEEEECC
T ss_pred C----------cEEcCCHHHHHhhCCEEEEec
Confidence 1 1123355 4688999999986
No 355
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.73 E-value=0.081 Score=53.82 Aligned_cols=74 Identities=19% Similarity=0.351 Sum_probs=51.6
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCCh-------------------hHHHHHHHHHhhcCCCCCCCcEEE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNE-------------------DRCKGEMLDLQHGAPFLRSPKIES 236 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~-------------------e~l~g~~~dL~~~~~~~~~~~v~~ 236 (488)
+..||.|||+|.+|+.++..|+..|+ .+|.|+|.+. .+++..+..+.... +..++..
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGv-g~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n---p~v~v~~ 192 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGI-GEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRN---SEISVSE 192 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC---TTSEEEE
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCC-CeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHC---CCCeEEE
Confidence 35699999999999999999999986 5899999753 24555555555542 2334433
Q ss_pred cC-------CccccCCCcEEEEec
Q psy12825 237 GS-------DIAMSEGSRIVIITA 253 (488)
Q Consensus 237 tt-------d~eal~dADiVIita 253 (488)
.. +.++++++|+||.+.
T Consensus 193 ~~~~i~~~~~~~~~~~~DlVvd~~ 216 (353)
T 3h5n_A 193 IALNINDYTDLHKVPEADIWVVSA 216 (353)
T ss_dssp EECCCCSGGGGGGSCCCSEEEECC
T ss_pred eecccCchhhhhHhccCCEEEEec
Confidence 21 122388999999875
No 356
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=94.73 E-value=0.0059 Score=62.55 Aligned_cols=66 Identities=17% Similarity=0.257 Sum_probs=47.5
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE-cCC---c-cccCCCcEEE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES-GSD---I-AMSEGSRIVI 250 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~-ttd---~-eal~dADiVI 250 (488)
+.+||+|||+|.+|..++..|+.. .+|.++|++.++++..+.... .+.. ..| + +.++++|+||
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~---~~V~V~~R~~~~a~~la~~~~---------~~~~d~~~~~~l~~ll~~~DvVI 82 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFAT---------PLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTSE---------EEECCTTCHHHHHHHHTTCSCEE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCC---------eEEEecCCHHHHHHHHhCCCEEE
Confidence 567999999999999999998876 489999999988765432110 0111 122 2 4588999999
Q ss_pred Eec
Q psy12825 251 ITA 253 (488)
Q Consensus 251 ita 253 (488)
++.
T Consensus 83 n~~ 85 (365)
T 2z2v_A 83 GAL 85 (365)
T ss_dssp ECC
T ss_pred ECC
Confidence 985
No 357
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=94.73 E-value=0.2 Score=47.01 Aligned_cols=112 Identities=15% Similarity=0.204 Sum_probs=67.0
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc----cc----
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA----MS---- 243 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e----al---- 243 (488)
.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... ..++. ...| ++ .+
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD--RVAALDLSAETLEETARTHWHAY----ADKVLRVRADVADEGDVNAAIAATM 75 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHSTTT----GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 357899998 9999999999999986 89999999887776555552110 11221 1223 21 12
Q ss_pred ---CCCcEEEEecccccCCC------cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 244 ---EGSRIVIITAGVRSLVG------ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 244 ---~dADiVIitag~~~k~G------~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+.|+||.++|...... .+ ....+..|+. +.+.+.+.+.+.. ...+|+++-
T Consensus 76 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS 142 (250)
T 2cfc_A 76 EQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIAS 142 (250)
T ss_dssp HHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECC
Confidence 37899999998643211 11 1223444443 3345555555443 355666653
No 358
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.72 E-value=0.037 Score=56.75 Aligned_cols=76 Identities=16% Similarity=0.180 Sum_probs=53.0
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc-cccCCCcEEE
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI-AMSEGSRIVI 250 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~-eal~dADiVI 250 (488)
..+..+|+|+|+|.+|..++..+...|. +|+.+|+++++++.....+.. ...+... .+. +.++++|+||
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga--~V~~~d~~~~~l~~~~~~~g~------~~~~~~~~~~~l~~~l~~aDvVi 236 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA--TVTVLDINIDKLRQLDAEFCG------RIHTRYSSAYELEGAVKRADLVI 236 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTT------SSEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhcCC------eeEeccCCHHHHHHHHcCCCEEE
Confidence 3567899999999999999998887776 899999999877643222211 1111111 123 4577999999
Q ss_pred Eeccccc
Q psy12825 251 ITAGVRS 257 (488)
Q Consensus 251 itag~~~ 257 (488)
.+++.+.
T Consensus 237 ~~~~~p~ 243 (377)
T 2vhw_A 237 GAVLVPG 243 (377)
T ss_dssp ECCCCTT
T ss_pred ECCCcCC
Confidence 9987654
No 359
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=94.72 E-value=0.17 Score=51.38 Aligned_cols=116 Identities=16% Similarity=0.170 Sum_probs=71.1
Q ss_pred hhhHHHHHHHHHHH-HhhhCCC-------CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHh
Q psy12825 152 QTMARDAVSTVDRL-LSQVAPS-------IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQ 223 (488)
Q Consensus 152 k~la~eivlid~~~-~~e~~~~-------~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~ 223 (488)
-.+++.+...+... .++.... .....++|+|||.|.||..+|..+..-|. +|..||++....+..
T Consensus 140 L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~----- 212 (345)
T 4g2n_A 140 LNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGFGL--AIHYHNRTRLSHALE----- 212 (345)
T ss_dssp HHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTTTC--EEEEECSSCCCHHHH-----
T ss_pred HHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHCCC--EEEEECCCCcchhhh-----
Confidence 46778887777543 2222110 34567899999999999999998875565 899999975333211
Q ss_pred hcCCCCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 224 HGAPFLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 224 ~~~~~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.. +....++ +.+++||+|+++.... .+...++ | . +.+....|.+++|+++.
T Consensus 213 ~g--------~~~~~~l~ell~~sDvV~l~~Plt----~~T~~li--~----~---~~l~~mk~gailIN~aR 264 (345)
T 4g2n_A 213 EG--------AIYHDTLDSLLGASDIFLIAAPGR----PELKGFL--D----H---DRIAKIPEGAVVINISR 264 (345)
T ss_dssp TT--------CEECSSHHHHHHTCSEEEECSCCC----GGGTTCB--C----H---HHHHHSCTTEEEEECSC
T ss_pred cC--------CeEeCCHHHHHhhCCEEEEecCCC----HHHHHHh--C----H---HHHhhCCCCcEEEECCC
Confidence 01 1223455 4688999999986321 0111111 1 1 22344467899999974
No 360
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=94.72 E-value=0.024 Score=56.87 Aligned_cols=90 Identities=17% Similarity=0.242 Sum_probs=61.2
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCC--hhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSN--EDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~--~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
|||.|+|| |.+|..++..|+..+. .+|+.+|++ ++.+. +.++++|+||.+++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~-~~v~~~d~~~d~~~l~------------------------~~~~~~d~Vih~a~ 55 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD-HHIFEVHRQTKEEELE------------------------SALLKADFIVHLAG 55 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-CEEEECCTTCCHHHHH------------------------HHHHHCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CEEEEECCCCCHHHHH------------------------HHhccCCEEEECCc
Confidence 68999998 9999999999998874 278888884 11111 12346888998886
Q ss_pred cccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 255 VRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 255 ~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
.... ....+.+..|+...+.+++.+++......+|.+|
T Consensus 56 ~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S 93 (369)
T 3st7_A 56 VNRP--EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSS 93 (369)
T ss_dssp SBCT--TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEE
T ss_pred CCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 5432 1223345567777788888888776554455554
No 361
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=94.71 E-value=0.16 Score=51.92 Aligned_cols=118 Identities=14% Similarity=0.210 Sum_probs=71.0
Q ss_pred hhhHHHHHHHHHHHH-hhhC------CCCCCCCceEEEEecccchHHHHHHHHHcCCCCe-EEEEeCChhHHHHHHHHHh
Q psy12825 152 QTMARDAVSTVDRLL-SQVA------PSIESPDQKITVVGAGQVGMACTYSILTQGIYSN-FCLIDSNEDRCKGEMLDLQ 223 (488)
Q Consensus 152 k~la~eivlid~~~~-~e~~------~~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~e-l~L~Di~~e~l~g~~~dL~ 223 (488)
-.+++.+...+.... ++.. .......++|+|||.|.||..++..+..-|. + |+.+|++....+. ..++
T Consensus 132 L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~--~~V~~~d~~~~~~~~-~~~~- 207 (364)
T 2j6i_A 132 LVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLVPFNP--KELLYYDYQALPKDA-EEKV- 207 (364)
T ss_dssp HHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCC--SEEEEECSSCCCHHH-HHHT-
T ss_pred HHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECcCHHHHHHHHHHHhCCC--cEEEEECCCccchhH-HHhc-
Confidence 467777777664432 1110 1135577899999999999999998865554 6 9999987644331 1111
Q ss_pred hcCCCCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 224 HGAPFLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 224 ~~~~~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+....++ +.+++||+|+++..... .++ .++ | ...+....|++++|+++.
T Consensus 208 ---------g~~~~~~l~ell~~aDvV~l~~P~t~---~t~-~li--~-------~~~l~~mk~ga~lIn~ar 258 (364)
T 2j6i_A 208 ---------GARRVENIEELVAQADIVTVNAPLHA---GTK-GLI--N-------KELLSKFKKGAWLVNTAR 258 (364)
T ss_dssp ---------TEEECSSHHHHHHTCSEEEECCCCST---TTT-TCB--C-------HHHHTTSCTTEEEEECSC
T ss_pred ---------CcEecCCHHHHHhcCCEEEECCCCCh---HHH-HHh--C-------HHHHhhCCCCCEEEECCC
Confidence 12223355 45789999999863211 011 111 1 122344567898888874
No 362
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=94.71 E-value=0.18 Score=50.72 Aligned_cols=114 Identities=18% Similarity=0.193 Sum_probs=68.9
Q ss_pred CceEEEEec-ccchHHHHHHHH-HcCCCCeEEEEeCChhH---------HHHHHHHHhhcCCC--CCC---CcEEEcCCc
Q psy12825 177 DQKITVVGA-GQVGMACTYSIL-TQGIYSNFCLIDSNEDR---------CKGEMLDLQHGAPF--LRS---PKIESGSDI 240 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La-~~~l~~el~L~Di~~e~---------l~g~~~dL~~~~~~--~~~---~~v~~ttd~ 240 (488)
.|+|.|+|| |.+|.+++..|+ ..+. +|+++|++... .+.....+.+.... ... ..+. ..|.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl 78 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNH--SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALE-VGDV 78 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCC--EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEE-ESCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCC--EEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEE-ECCC
Confidence 368999998 999999999999 8886 89999986433 23222222222110 001 2222 2332
Q ss_pred -------cccC--C-CcEEEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 241 -------AMSE--G-SRIVIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 241 -------eal~--d-ADiVIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+.++ + +|+||.+++..... .....+++..|+.-...+.+.+.+..... +|++|
T Consensus 79 ~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~-iv~~S 143 (397)
T 1gy8_A 79 RNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDK-IIFSS 143 (397)
T ss_dssp TCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred CCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCE-EEEEC
Confidence 2344 5 99999998754211 01234566778888888888877764443 44444
No 363
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=94.71 E-value=0.12 Score=51.32 Aligned_cols=87 Identities=20% Similarity=0.278 Sum_probs=58.4
Q ss_pred hhhHHHHHHHHHHHH-hhhCC----CCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcC
Q psy12825 152 QTMARDAVSTVDRLL-SQVAP----SIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGA 226 (488)
Q Consensus 152 k~la~eivlid~~~~-~e~~~----~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~ 226 (488)
-.+++.+...++... ++... ......++|+|||.|.||..++..+...|. +|+.+|++.+. + ...+. .
T Consensus 112 L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~--~V~~~d~~~~~-~-~~~~~--g- 184 (307)
T 1wwk_A 112 FSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANALGM--NILLYDPYPNE-E-RAKEV--N- 184 (307)
T ss_dssp HHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCH-H-HHHHT--T-
T ss_pred HHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHCCC--EEEEECCCCCh-h-hHhhc--C-
Confidence 467777777765432 22211 034567899999999999999998877675 89999998764 2 11111 0
Q ss_pred CCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 227 PFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 227 ~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
+.. .++ +.+++||+|+++.
T Consensus 185 -------~~~-~~l~ell~~aDvV~l~~ 204 (307)
T 1wwk_A 185 -------GKF-VDLETLLKESDVVTIHV 204 (307)
T ss_dssp -------CEE-CCHHHHHHHCSEEEECC
T ss_pred -------ccc-cCHHHHHhhCCEEEEec
Confidence 112 255 4588999999986
No 364
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=94.71 E-value=0.036 Score=55.52 Aligned_cols=69 Identities=9% Similarity=0.076 Sum_probs=46.9
Q ss_pred CCCceEEEEecccchHH-HHHHHHHcCCCCeE-EEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-c--CCCcEE
Q psy12825 175 SPDQKITVVGAGQVGMA-CTYSILTQGIYSNF-CLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-S--EGSRIV 249 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~-ia~~La~~~l~~el-~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l--~dADiV 249 (488)
.+++||+|||+|.+|.. .+..+...+-. +| .++|+++++++..+..+. ..+ ..+|+++ | .+.|+|
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g-------~~~--~y~d~~ell~~~~iDaV 90 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFS-------VPH--AFGSYEEMLASDVIDAV 90 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHT-------CSE--EESSHHHHHHCSSCSEE
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcC-------CCe--eeCCHHHHhcCCCCCEE
Confidence 35689999999999974 45666554322 44 488999998876655442 112 3468754 3 568999
Q ss_pred EEec
Q psy12825 250 IITA 253 (488)
Q Consensus 250 Iita 253 (488)
+++.
T Consensus 91 ~I~t 94 (350)
T 4had_A 91 YIPL 94 (350)
T ss_dssp EECS
T ss_pred EEeC
Confidence 9985
No 365
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=94.70 E-value=0.15 Score=49.26 Aligned_cols=113 Identities=15% Similarity=0.119 Sum_probs=70.5
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCcc----------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIA---------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~e---------- 241 (488)
.+.+++.|+|| |.+|..++..|+..|. +|++.|++.+.++....++... ..+... +|.+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~~~~Dv~d~~~v~~~~~~~~ 97 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGY--GVALAGRRLDALQETAAEIGDD------ALCVPTDVTDPDSVRALFTATV 97 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTSC------CEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCCC------eEEEEecCCCHHHHHHHHHHHH
Confidence 34556777798 9999999999999987 8999999998887766665321 111111 1221
Q ss_pred -ccCCCcEEEEecccccCCC----cch---HhhHhhhHH----HHHHHHHHHhccC-CCcEEEEEeC
Q psy12825 242 -MSEGSRIVIITAGVRSLVG----ETR---LQLVDRNVK----IFKDLIPKIAKGS-PDCILLIISN 295 (488)
Q Consensus 242 -al~dADiVIitag~~~k~G----~~r---~dll~~N~~----ii~ei~~~I~~~~-p~a~vIv~TN 295 (488)
.+...|++|..+|.....+ .+. .+.+.-|+. +.+.+.+.+.+.. +.+.||+++-
T Consensus 98 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS 164 (272)
T 4dyv_A 98 EKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGS 164 (272)
T ss_dssp HHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECc
Confidence 1237999999998743211 121 233445543 4566666666554 2567777764
No 366
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=94.70 E-value=0.2 Score=47.89 Aligned_cols=111 Identities=15% Similarity=0.242 Sum_probs=69.6
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc----ccC--
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA----MSE-- 244 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e----al~-- 244 (488)
++.++|.|+|| |.+|..++..|+..|. +|++.|++++.++....++.... .+ ...| .+ .++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~------~~-~~~D~~~~~~v~~~~~~~ 75 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGA--KVVFGDILDEEGKAMAAELADAA------RY-VHLDVTQPAQWKAAVDTA 75 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTGGGE------EE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhcCc------eE-EEecCCCHHHHHHHHHHH
Confidence 45678999998 9999999999999987 89999999887766555553211 11 1122 21 232
Q ss_pred -----CCcEEEEecccccCC---Ccc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 245 -----GSRIVIITAGVRSLV---GET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 245 -----dADiVIitag~~~k~---G~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.|++|..+|..... ..+ -...+..|+. +.+.+.+.+.+.. .+.+|+++-
T Consensus 76 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS 140 (260)
T 1nff_A 76 VTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISS 140 (260)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEee
Confidence 799999999865321 112 1233445544 3355566665543 355666653
No 367
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=94.70 E-value=0.18 Score=46.92 Aligned_cols=109 Identities=16% Similarity=0.219 Sum_probs=65.7
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCcc-----------c
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIA-----------M 242 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~e-----------a 242 (488)
.++|.|+|+ |.+|..++..|+..|. +|+++|++++.++....++.. ..+... +|.+ .
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-------~~~~~~D~~~~~~~~~~~~~~~~~ 75 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGY--RVGLMARDEKRLQALAAELEG-------ALPLPGDVREEGDWARAVAAMEEA 75 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHSTT-------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhh-------ceEEEecCCCHHHHHHHHHHHHHH
Confidence 356899998 9999999999999887 899999998777654444321 111111 1221 1
Q ss_pred cCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 SEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 l~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.+.|+||.++|...... .+ ..+.+..|+. ..+.+.+.+.+. ..+.+|+++-
T Consensus 76 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~isS 137 (234)
T 2ehd_A 76 FGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNVGS 137 (234)
T ss_dssp HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECC
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEECC
Confidence 237899999998643211 11 2233444543 334555555543 3455666654
No 368
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=94.69 E-value=0.11 Score=51.00 Aligned_cols=112 Identities=19% Similarity=0.214 Sum_probs=65.1
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHH--HHHHHhhcCCCCCCCcEEEc--CC---c-cccCCCc
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKG--EMLDLQHGAPFLRSPKIESG--SD---I-AMSEGSR 247 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g--~~~dL~~~~~~~~~~~v~~t--td---~-eal~dAD 247 (488)
+++|.|+|| |.+|++++..|+..|. +|+.++++.+.... ...++... ....+... +| . ++++++|
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~D 82 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGY--AVNTTVRDPDNQKKVSHLLELQEL----GDLKIFRADLTDELSFEAPIAGCD 82 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTC--EEEEEESCTTCTTTTHHHHHHGGG----SCEEEEECCTTTSSSSHHHHTTCS
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCcchhhhHHHHHhcCCC----CcEEEEecCCCChHHHHHHHcCCC
Confidence 478999998 9999999999999886 88877776543211 11122211 01111111 12 2 3578999
Q ss_pred EEEEecccccCCCcc-hHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 248 IVIITAGVRSLVGET-RLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 248 iVIitag~~~k~G~~-r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+||-+++........ ..+++..|+.-...+.+.+.+...-..+|++|
T Consensus 83 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~S 130 (338)
T 2rh8_A 83 FVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTS 130 (338)
T ss_dssp EEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred EEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEe
Confidence 999998643111111 12366778888788888777653123455554
No 369
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=94.69 E-value=0.14 Score=49.46 Aligned_cols=115 Identities=11% Similarity=0.112 Sum_probs=70.4
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc-------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA------- 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e------- 241 (488)
.++.++|.|+|| |.+|..++..|+..|. +|++++++++.++....++.... .++. ...| .+
T Consensus 41 ~l~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dl~d~~~v~~~~~ 113 (285)
T 2c07_A 41 CGENKVALVTGAGRGIGREIAKMLAKSVS--HVICISRTQKSCDSVVDEIKSFG-----YESSGYAGDVSKKEEISEVIN 113 (285)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSS--EEEEEESSHHHHHHHHHHHHTTT-----CCEEEEECCTTCHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcC-----CceeEEECCCCCHHHHHHHHH
Confidence 345678999998 9999999999998876 89999998887776666665421 1221 1223 21
Q ss_pred ----ccCCCcEEEEecccccCC---Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeCC
Q psy12825 242 ----MSEGSRIVIITAGVRSLV---GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 242 ----al~dADiVIitag~~~k~---G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TNP 296 (488)
.+.+.|+||.++|..... ..+ ..+.+..|+.- .+.+.+.+.+.. .+.+|+++-.
T Consensus 114 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~ 181 (285)
T 2c07_A 114 KILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSI 181 (285)
T ss_dssp HHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCT
T ss_pred HHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCh
Confidence 124789999999865321 112 22334445433 444444444433 3556666643
No 370
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=94.68 E-value=0.13 Score=48.90 Aligned_cols=114 Identities=13% Similarity=0.117 Sum_probs=63.7
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCcc----------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIA---------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~e---------- 241 (488)
.+.+++.|+|+ |.+|.+++..|+..|. +|+++|++++.++....++... ..+... +|.+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~~~~Dv~~~~~v~~~~~~~~ 76 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGA--TVLGLDLKPPAGEEPAAELGAA------VRFRNADVTNEADATAALAFAK 76 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSCC------------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHhCCc------eEEEEccCCCHHHHHHHHHHHH
Confidence 34567889998 9999999999999987 8999999887766554444211 111111 1221
Q ss_pred -ccCCCcEEEEecccccCCC-------cc---hHhhHhhhHH----HHHHHHHHHhcc-----CCCcEEEEEeCC
Q psy12825 242 -MSEGSRIVIITAGVRSLVG-------ET---RLQLVDRNVK----IFKDLIPKIAKG-----SPDCILLIISNP 296 (488)
Q Consensus 242 -al~dADiVIitag~~~k~G-------~~---r~dll~~N~~----ii~ei~~~I~~~-----~p~a~vIv~TNP 296 (488)
.+...|++|..+|...... .+ -...+..|+. +.+.+.+.+.+. ...+.||+++-.
T Consensus 77 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~ 151 (257)
T 3tpc_A 77 QEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASI 151 (257)
T ss_dssp HHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred HHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEech
Confidence 1237999999998653211 11 1223444543 445555555553 235667777643
No 371
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=94.68 E-value=0.074 Score=52.37 Aligned_cols=116 Identities=14% Similarity=0.123 Sum_probs=67.5
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CC---c-cccCCCcE
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SD---I-AMSEGSRI 248 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td---~-eal~dADi 248 (488)
++++|.|+|| |.+|++++..|+..|. +|+.++++.+..... ..+.+.........+... +| . ++++++|+
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPTNVKKV-KHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTG 80 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCTTCHHHH-HHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEECCcchhHHH-HHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCE
Confidence 4578999997 9999999999999886 888888776533221 112111000000111111 12 2 35789999
Q ss_pred EEEecccccCCCcc-hHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 249 VIITAGVRSLVGET-RLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 249 VIitag~~~k~G~~-r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
||.+++........ ..+++..|+.-...+.+.+.+...-..+|++|
T Consensus 81 Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~S 127 (337)
T 2c29_D 81 VFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTS 127 (337)
T ss_dssp EEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred EEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEee
Confidence 99988643211122 23466778887788888777654223455554
No 372
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.67 E-value=0.017 Score=59.77 Aligned_cols=119 Identities=20% Similarity=0.364 Sum_probs=73.8
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCCh----hH---HHHHHHHHhhcCCCCCCCcEEEcCCc-cccC
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNE----DR---CKGEMLDLQHGAPFLRSPKIESGSDI-AMSE 244 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~----e~---l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~ 244 (488)
...+..||+|+|||.+|.+++..+...|. .+|+++|.+- ++ +......+.+... ... ...++ ++++
T Consensus 184 ~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga-~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~---~~~--~~~~L~eav~ 257 (398)
T 2a9f_A 184 KSLDEVSIVVNGGGSAGLSITRKLLAAGA-TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTN---REF--KSGTLEDALE 257 (398)
T ss_dssp CCTTSCEEEEECCSHHHHHHHHHHHHHTC-CEEEEEETTEECCTTCCCSCCC---CHHHHHS---CTT--CCCSCSHHHH
T ss_pred CCCCccEEEEECCCHHHHHHHHHHHHcCC-CeEEEEECCCcccCCccccchHHHHHHhhccC---ccc--chhhHHHHhc
Confidence 45667899999999999999999888775 6899999862 11 2222222221100 000 12344 6799
Q ss_pred CCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCc-hhHHHHHHHhcCCCCCcEEeec
Q psy12825 245 GSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPV-DVLTYISWKLSGFPKNRVIGSG 319 (488)
Q Consensus 245 dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPv-di~t~~~~k~sg~p~~rViG~g 319 (488)
+||++|=+.+ ||. +-+++.+.|. ++.+|+=.+||. .+..+-++++ | ..||++|
T Consensus 258 ~ADV~IG~Sa----pgl-----------~T~EmVk~Ma---~~pIIfalsNPt~E~~pe~a~~~-g---~~i~atG 311 (398)
T 2a9f_A 258 GADIFIGVSA----PGV-----------LKAEWISKMA---ARPVIFAMANPIPEIYPDEALEA-G---AYIVGTG 311 (398)
T ss_dssp TTCSEEECCS----TTC-----------CCHHHHHTSC---SSCEEEECCSSSCSSCHHHHHTT-T---CSEEEES
T ss_pred cCCEEEecCC----CCC-----------CCHHHHHhhC---CCCEEEECCCCCccCCHHHHHHh-C---CeEEEeC
Confidence 9998776532 332 1133344443 789999999996 4555666554 2 3588887
No 373
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.66 E-value=0.08 Score=54.17 Aligned_cols=67 Identities=18% Similarity=0.178 Sum_probs=49.8
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-ccc-CCCcEEEE
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMS-EGSRIVII 251 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal-~dADiVIi 251 (488)
..+.++|+|+|+|.||..++..|...|. +|+++|++.++++..+.++. .+ .. +. +.+ .+||+++.
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~Ga--kVvv~D~~~~~l~~~a~~~g--------a~--~v-~~~~ll~~~~DIvip 236 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGA--KLVVTDVNKAAVSAAVAEEG--------AD--AV-APNAIYGVTCDIFAP 236 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHC--------CE--EC-CGGGTTTCCCSEEEE
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHcC--------CE--EE-ChHHHhccCCcEeec
Confidence 4677899999999999999999988887 79999999987765544431 11 11 22 223 38999998
Q ss_pred ec
Q psy12825 252 TA 253 (488)
Q Consensus 252 ta 253 (488)
++
T Consensus 237 ~a 238 (364)
T 1leh_A 237 CA 238 (364)
T ss_dssp CS
T ss_pred cc
Confidence 75
No 374
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=94.65 E-value=0.19 Score=47.72 Aligned_cols=111 Identities=14% Similarity=0.121 Sum_probs=69.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCcc----------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIA---------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~e---------- 241 (488)
.+.+++.|+|+ |.+|.+++..|+..|. +|++.|++++.++....++.... ..... +|.+
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~------~~~~~Dv~d~~~v~~~~~~~~ 78 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGA--KVIGTATSESGAQAISDYLGDNG------KGMALNVTNPESIEAVLKAIT 78 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHGGGE------EEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcccc------eEEEEeCCCHHHHHHHHHHHH
Confidence 34567888898 9999999999999987 89999999988877666664321 11111 1221
Q ss_pred -ccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEe
Q psy12825 242 -MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 242 -al~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~T 294 (488)
.+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+.. .+.||+++
T Consensus 79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~is 141 (248)
T 3op4_A 79 DEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVG 141 (248)
T ss_dssp HHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEc
Confidence 2337899999998653211 111 223444543 4455555554443 35566665
No 375
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.65 E-value=0.3 Score=46.82 Aligned_cols=113 Identities=16% Similarity=0.065 Sum_probs=68.1
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e-------- 241 (488)
++.+++.|+|| |.+|..++..|+..|. +|+++|++++.++....++. .++. ...| .+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~ 73 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGA--SLVAVDREERLLAEAVAALE--------AEAIAVVADVSDPKAVEAVFAE 73 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTCC--------SSEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhc--------CceEEEEcCCCCHHHHHHHHHH
Confidence 45678999998 9999999999999987 89999999887765443332 1111 1223 21
Q ss_pred ---ccCCCcEEEEecccccCC---Ccch---HhhHhhhHHHHHHHHHHHhccC-CCcEEEEEeCCc
Q psy12825 242 ---MSEGSRIVIITAGVRSLV---GETR---LQLVDRNVKIFKDLIPKIAKGS-PDCILLIISNPV 297 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~---G~~r---~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~TNPv 297 (488)
.+...|++|..+|..... ..+. ...+..|+.-...+.+.+..+- ..+.||+++-..
T Consensus 74 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 139 (263)
T 2a4k_A 74 ALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA 139 (263)
T ss_dssp HHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 123569999999865321 1121 2345566554444444433321 145677776543
No 376
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=94.64 E-value=0.23 Score=46.70 Aligned_cols=112 Identities=15% Similarity=0.162 Sum_probs=68.5
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---ccc--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IAM-------- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~ea-------- 242 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... ..+ ...| .++
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~-~~~D~~~~~~~~~~~~~~ 80 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGA--RLILIDREAAALDRAAQELGAAV-----AAR-IVADVTDAEAMTAAAAEA 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGGGE-----EEE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcccc-----eeE-EEEecCCHHHHHHHHHHH
Confidence 45578999998 9999999999999986 89999999887766555552110 011 1122 211
Q ss_pred --cCCCcEEEEecccccCC---Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 --SEGSRIVIITAGVRSLV---GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 --l~dADiVIitag~~~k~---G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.+.|+||.++|..... ..+ ..+.+..|+.- .+.+.+.+.+.. .+.+|+++-
T Consensus 81 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS 144 (254)
T 2wsb_A 81 EAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGS 144 (254)
T ss_dssp HHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEec
Confidence 25789999999864321 111 12334455443 444555554443 355666654
No 377
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=94.63 E-value=0.16 Score=51.28 Aligned_cols=116 Identities=11% Similarity=0.123 Sum_probs=70.0
Q ss_pred hhhHHHHHHHHHHH-HhhhCC----CCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcC
Q psy12825 152 QTMARDAVSTVDRL-LSQVAP----SIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGA 226 (488)
Q Consensus 152 k~la~eivlid~~~-~~e~~~----~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~ 226 (488)
-.+++.+...+... .++... ......++|+|||.|.||..+|..+..-|. +|+.||++.+.. ...+. .
T Consensus 135 L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~--~~~~~--g- 207 (335)
T 2g76_A 135 MCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGM--KTIGYDPIISPE--VSASF--G- 207 (335)
T ss_dssp HHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSSCHH--HHHHT--T-
T ss_pred HHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHHCCC--EEEEECCCcchh--hhhhc--C-
Confidence 35777777766443 222211 134567899999999999999998875554 899999976532 11111 0
Q ss_pred CCCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 227 PFLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 227 ~~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.. . .++ +.+++||+|+++..... .++ .++ | .+.+....|.+++|+++-
T Consensus 208 -----~~--~-~~l~ell~~aDvV~l~~P~t~---~t~-~li--~-------~~~l~~mk~gailIN~ar 256 (335)
T 2g76_A 208 -----VQ--Q-LPLEEIWPLCDFITVHTPLLP---STT-GLL--N-------DNTFAQCKKGVRVVNCAR 256 (335)
T ss_dssp -----CE--E-CCHHHHGGGCSEEEECCCCCT---TTT-TSB--C-------HHHHTTSCTTEEEEECSC
T ss_pred -----ce--e-CCHHHHHhcCCEEEEecCCCH---HHH-Hhh--C-------HHHHhhCCCCcEEEECCC
Confidence 11 1 255 56889999999863211 011 111 1 123444567888888863
No 378
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.62 E-value=0.05 Score=53.69 Aligned_cols=109 Identities=15% Similarity=0.109 Sum_probs=68.4
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---c----ccc
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---I----AMS 243 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~----eal 243 (488)
...+.++|.|+|| |.+|..++..|+..|. +|+++|++...... +.+. . .++. ...| . +.+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~--l---~~v~~~~~Dl~d~~~~~~~~ 84 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGH--EILVIDNFATGKRE----VLPP--V---AGLSVIEGSVTDAGLLERAF 84 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTC--EEEEEECCSSSCGG----GSCS--C---TTEEEEECCTTCHHHHHHHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCccchh----hhhc--c---CCceEEEeeCCCHHHHHHHH
Confidence 4456789999999 9999999999998886 89999985432210 0010 0 1221 1223 2 246
Q ss_pred C--CCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 244 E--GSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 244 ~--dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+ ++|+||.+++..........+ +..|+.-...+.+.+.+.... .+|++|
T Consensus 85 ~~~~~D~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~-~iV~~S 135 (330)
T 2pzm_A 85 DSFKPTHVVHSAAAYKDPDDWAED-AATNVQGSINVAKAASKAGVK-RLLNFQ 135 (330)
T ss_dssp HHHCCSEEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHHTCS-EEEEEE
T ss_pred hhcCCCEEEECCccCCCccccChh-HHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence 6 899999998754322122223 567777777777777765433 455554
No 379
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=94.62 E-value=0.064 Score=52.01 Aligned_cols=110 Identities=15% Similarity=0.113 Sum_probs=65.9
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccCCCcEEEEecc
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSEGSRIVIITAG 254 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~dADiVIitag 254 (488)
+++||.|+|| |.+|++++..|+..|. +|+.+|++..........+.+.. ....+ ..-..++.++|+||.+++
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~--~~~~~Dl~~~d~vi~~a~ 78 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGE--EVTVLDDLRVPPMIPPEGTGKFL---EKPVL--ELEERDLSDVRLVYHLAS 78 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC--CEEEECCCSSCCSSCCTTSSEEE---CSCGG--GCCHHHHTTEEEEEECCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCC--EEEEEecCCcccccchhhhhhhc---cCCCe--eEEeCccccCCEEEECCc
Confidence 4689999999 9999999999999886 89999986541100000011100 00010 001135669999999987
Q ss_pred cccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 255 VRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 255 ~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
..... .....+.+. |+.-.+.+.+.+.+..... +|++|
T Consensus 79 ~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~-~v~~S 118 (321)
T 3vps_A 79 HKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPK-VVVGS 118 (321)
T ss_dssp CCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCE-EEEEE
T ss_pred cCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCe-EEEec
Confidence 54210 111223345 8888888888888776444 44444
No 380
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=94.61 E-value=0.17 Score=49.57 Aligned_cols=113 Identities=14% Similarity=0.171 Sum_probs=70.9
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
++.++|.|+|+ |.+|..++..|+..|. +|++.|++++.++....++.... ..++. ...|. +
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dv~d~~~v~~~~~~ 112 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGA--NVAVAARSPRELSSVTAELGELG----AGNVIGVRLDVSDPGSCADAART 112 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHTTSS----SSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhC----CCcEEEEEEeCCCHHHHHHHHHH
Confidence 45567888898 9999999999999987 89999999988887777775431 11222 22232 1
Q ss_pred ---ccCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEe
Q psy12825 242 ---MSEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~T 294 (488)
.+...|++|..+|..... ..+. ...+..|+. +.+...+.+.+... +.||+++
T Consensus 113 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~-g~iV~is 177 (293)
T 3rih_A 113 VVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGR-GRVILTS 177 (293)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSS-CEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-CEEEEEe
Confidence 234679999999864321 1222 223445544 34444555555443 4566665
No 381
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=94.61 E-value=0.13 Score=49.06 Aligned_cols=113 Identities=15% Similarity=0.185 Sum_probs=69.3
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhH-HHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDR-CKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~-l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
+.++|.|+|| |.+|..++..|+..|. +|++.|++++. ++....++.... ..++. ...|. +
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~ 76 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGA--DIVLNGFGDAAEIEKVRAGLAAQH----GVKVLYDGADLSKGEAVRGLVDN 76 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEECCSCHHHHHHHHHHHHHHH----TSCEEEECCCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHhcc----CCcEEEEECCCCCHHHHHHHHHH
Confidence 4567888898 9999999999999987 89999998876 666555554320 01111 12232 1
Q ss_pred ---ccCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|...... .+ -...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 77 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS 142 (260)
T 1x1t_A 77 AVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIAS 142 (260)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECc
Confidence 1237899999998653211 11 1233445544 4555555555443 356777754
No 382
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=94.60 E-value=0.05 Score=54.87 Aligned_cols=73 Identities=8% Similarity=0.042 Sum_probs=47.5
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-cC--CCcEEEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-SE--GSRIVII 251 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l~--dADiVIi 251 (488)
++++||+|||+|.+|..++..|...+-..-+.++|.++++++..+.... .. ......+|+++ ++ ++|+|++
T Consensus 4 ~~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~----~~--~~~~~~~~~~~ll~~~~~D~V~i 77 (362)
T 1ydw_A 4 ETQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANN----YP--ESTKIHGSYESLLEDPEIDALYV 77 (362)
T ss_dssp --CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTT----CC--TTCEEESSHHHHHHCTTCCEEEE
T ss_pred CCceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhC----CC--CCCeeeCCHHHHhcCCCCCEEEE
Confidence 3568999999999999888877765322234689999887765443321 11 12233467754 43 6999999
Q ss_pred ec
Q psy12825 252 TA 253 (488)
Q Consensus 252 ta 253 (488)
+.
T Consensus 78 ~t 79 (362)
T 1ydw_A 78 PL 79 (362)
T ss_dssp CC
T ss_pred cC
Confidence 85
No 383
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=94.59 E-value=0.033 Score=56.24 Aligned_cols=70 Identities=10% Similarity=0.115 Sum_probs=46.4
Q ss_pred CCCCCceEEEEecccchH-HHHHHHHHcCCCCeE-EEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-cC--CCc
Q psy12825 173 IESPDQKITVVGAGQVGM-ACTYSILTQGIYSNF-CLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-SE--GSR 247 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~-~ia~~La~~~l~~el-~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l~--dAD 247 (488)
..|+++||+|||+|.+|. .++..|...+-. +| .++|+++++++..+.... .. ..+|+++ ++ +.|
T Consensus 23 ~~m~~~rigiIG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g--------~~--~~~~~~~ll~~~~~D 91 (350)
T 3rc1_A 23 ANANPIRVGVIGCADIAWRRALPALEAEPLT-EVTAIASRRWDRAKRFTERFG--------GE--PVEGYPALLERDDVD 91 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHCTTE-EEEEEEESSHHHHHHHHHHHC--------SE--EEESHHHHHTCTTCS
T ss_pred CCCCceEEEEEcCcHHHHHHHHHHHHhCCCe-EEEEEEcCCHHHHHHHHHHcC--------CC--CcCCHHHHhcCCCCC
Confidence 445678999999999998 677777765322 55 488999987775444331 11 2257743 44 699
Q ss_pred EEEEec
Q psy12825 248 IVIITA 253 (488)
Q Consensus 248 iVIita 253 (488)
+|+++.
T Consensus 92 ~V~i~t 97 (350)
T 3rc1_A 92 AVYVPL 97 (350)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999985
No 384
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=94.59 E-value=0.17 Score=49.13 Aligned_cols=113 Identities=19% Similarity=0.193 Sum_probs=70.5
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE-cCC---cc--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES-GSD---IA-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~-ttd---~e-------- 241 (488)
.+.+++.|+|| |.+|..++..|+..|. +|+++|++++.++....++.... .++.. ..| .+
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 78 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGA--KVVVTARNGNALAELTDEIAGGG-----GEAAALAGDVGDEALHEALVEL 78 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHTTTT-----CCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHHHHH
Confidence 45567888898 9999999999999987 89999999988887777665321 12221 222 21
Q ss_pred ---ccCCCcEEEEecccccCCC----cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLVG----ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~G----~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|.....+ .+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 79 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS 145 (280)
T 3tox_A 79 AVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSS 145 (280)
T ss_dssp HHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcC
Confidence 1237899999998642211 121 223444443 3444555555433 456666653
No 385
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=94.59 E-value=0.028 Score=56.08 Aligned_cols=69 Identities=7% Similarity=0.048 Sum_probs=47.9
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEE-EEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-cC--CCcEEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFC-LIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-SE--GSRIVI 250 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~-L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l~--dADiVI 250 (488)
++++||+|||+|.+|..++..|...+-. +|+ ++|+++++++..+.... .. ...+|+++ +. ++|+|+
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~-------~~--~~~~~~~~ll~~~~~D~V~ 72 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQA-EVRGIASRRLENAQKMAKELA-------IP--VAYGSYEELCKDETIDIIY 72 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSE-EEEEEBCSSSHHHHHHHHHTT-------CC--CCBSSHHHHHHCTTCSEEE
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCc-EEEEEEeCCHHHHHHHHHHcC-------CC--ceeCCHHHHhcCCCCCEEE
Confidence 4568999999999999988888765322 554 88999887765443321 01 12457743 44 899999
Q ss_pred Eec
Q psy12825 251 ITA 253 (488)
Q Consensus 251 ita 253 (488)
++.
T Consensus 73 i~t 75 (330)
T 3e9m_A 73 IPT 75 (330)
T ss_dssp ECC
T ss_pred EcC
Confidence 985
No 386
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=94.57 E-value=0.14 Score=47.83 Aligned_cols=111 Identities=16% Similarity=0.126 Sum_probs=66.1
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEE-EeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc----c-----
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCL-IDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA----M----- 242 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L-~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e----a----- 242 (488)
++|.|+|| |.+|..++..|+..|. +|++ ++++++.++....++.... .++. ...| .+ .
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~--~v~~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~ 74 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGC--KVLVNYARSAKAAEEVSKQIEAYG-----GQAITFGGDVSKEADVEAMMKTAI 74 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHT-----CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC-----CcEEEEeCCCCCHHHHHHHHHHHH
Confidence 57889998 9999999999999986 7887 5888877766655554321 1221 1223 21 1
Q ss_pred --cCCCcEEEEecccccCCC---cc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeCC
Q psy12825 243 --SEGSRIVIITAGVRSLVG---ET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 243 --l~dADiVIitag~~~k~G---~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TNP 296 (488)
+.+.|+||.+++...... .+ ....+..|+.- .+.+.+.+.+. ..+.+|+++-.
T Consensus 75 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~ 139 (244)
T 1edo_A 75 DAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASV 139 (244)
T ss_dssp HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT
T ss_pred HHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCh
Confidence 237899999998654211 11 22334455443 34444444333 24567776643
No 387
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.57 E-value=0.11 Score=50.78 Aligned_cols=77 Identities=16% Similarity=0.236 Sum_probs=55.1
Q ss_pred CCCceEEEEe-cccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE-cCCc----cccCCCcE
Q psy12825 175 SPDQKITVVG-AGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES-GSDI----AMSEGSRI 248 (488)
Q Consensus 175 ~~~~KIaIIG-AG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~-ttd~----eal~dADi 248 (488)
.+.+++.|+| +|.+|.+++..|+..|. +|+++|++.++++....++..... ..-+.. .+|. +.++++|+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~--~V~i~~R~~~~~~~l~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~Dv 191 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA--EVVLCGRKLDKAQAAADSVNKRFK---VNVTAAETADDASRAEAVKGAHF 191 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHHT---CCCEEEECCSHHHHHHHTTTCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEECCHHHHHHHHHHHHhcCC---cEEEEecCCCHHHHHHHHHhCCE
Confidence 4567899999 69999999999999986 699999998888777666653210 001111 1232 35788999
Q ss_pred EEEecccc
Q psy12825 249 VIITAGVR 256 (488)
Q Consensus 249 VIitag~~ 256 (488)
||.+++..
T Consensus 192 lVn~ag~g 199 (287)
T 1lu9_A 192 VFTAGAIG 199 (287)
T ss_dssp EEECCCTT
T ss_pred EEECCCcc
Confidence 99998643
No 388
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=94.57 E-value=0.074 Score=51.36 Aligned_cols=107 Identities=16% Similarity=0.186 Sum_probs=66.9
Q ss_pred eEEEEec-ccchHHHHHHHHHcC-CCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccC-----CCcEEE
Q psy12825 179 KITVVGA-GQVGMACTYSILTQG-IYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSE-----GSRIVI 250 (488)
Q Consensus 179 KIaIIGA-G~vG~~ia~~La~~~-l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~-----dADiVI 250 (488)
||.|+|| |.+|++++..|+..| . +|++++.+..... ...+... .....+.-.... +.++ ++|+||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~--~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~d~vi 73 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTK--FVNLVDL---NIADYMDKEDFLIQIMAGEEFGDVEAIF 73 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCC--CEEEEECCSSGGG--GHHHHTS---CCSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCc--EEEEEccCCCCch--hhhcCcc---eeccccccHHHHHHHHhccccCCCcEEE
Confidence 6899999 999999999999887 4 8999998654321 1112211 001111101112 2344 499999
Q ss_pred EecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 251 ITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 251 itag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
.+++..........+.+..|+.-...+.+.+.+... .+|++|
T Consensus 74 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S 115 (310)
T 1eq2_A 74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYAS 115 (310)
T ss_dssp ECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEE
T ss_pred ECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Confidence 998754332234556677888888888888877654 455554
No 389
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=94.57 E-value=0.17 Score=53.03 Aligned_cols=119 Identities=13% Similarity=0.082 Sum_probs=74.8
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCC-CCeEEEEeCChhHHHHHHHHHhhcCCCC-----------CCCcEEE-cC
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGI-YSNFCLIDSNEDRCKGEMLDLQHGAPFL-----------RSPKIES-GS 238 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l-~~el~L~Di~~e~l~g~~~dL~~~~~~~-----------~~~~v~~-tt 238 (488)
...++++|.|+|| |.+|+.++..|+..+. ..+|++++++++.... ...+.+..... ...++.. ..
T Consensus 69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 147 (478)
T 4dqv_A 69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAADRLEVVAG 147 (478)
T ss_dssp CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence 4456789999998 9999999999998732 2499999997654432 22332221100 0012221 22
Q ss_pred Cc-------------cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 239 DI-------------AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 239 d~-------------eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
|. +.++++|+||.+++.... ....+.+..|+.-...+++...+.....+|.+-|
T Consensus 148 Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS 214 (478)
T 4dqv_A 148 DKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTKLKPFTYVST 214 (478)
T ss_dssp CTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred ECCCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence 32 235689999999875432 2233556778888888888888775555444444
No 390
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=94.57 E-value=0.1 Score=50.23 Aligned_cols=111 Identities=15% Similarity=0.135 Sum_probs=68.1
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCcc----cc-----
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIA----MS----- 243 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~e----al----- 243 (488)
++++|.|+|| |.+|.+++..|+..|. +|++.|++.+.++....++.. ...+... +|.+ .+
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~ 75 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGD--TVIGTARRTEALDDLVAAYPD------RAEAISLDVTDGERIDVVAADVLA 75 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHCTT------TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhccC------CceEEEeeCCCHHHHHHHHHHHHH
Confidence 3567888898 9999999999999987 899999998877654433321 1111111 1221 12
Q ss_pred --CCCcEEEEecccccCC---Ccch---HhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeC
Q psy12825 244 --EGSRIVIITAGVRSLV---GETR---LQLVDRNVKI----FKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 244 --~dADiVIitag~~~k~---G~~r---~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+.|+||.++|..... ..+. ...+..|+.- .+.+.+.+.+.. .+.||+++-
T Consensus 76 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS 138 (281)
T 3m1a_A 76 RYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISS 138 (281)
T ss_dssp HHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcC
Confidence 3789999999864321 1222 2344555544 666666666544 345666653
No 391
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=94.56 E-value=0.089 Score=53.15 Aligned_cols=115 Identities=16% Similarity=0.224 Sum_probs=70.8
Q ss_pred hhhHHHHHHHHHHHH-hhhCC-----CCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhc
Q psy12825 152 QTMARDAVSTVDRLL-SQVAP-----SIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHG 225 (488)
Q Consensus 152 k~la~eivlid~~~~-~e~~~-----~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~ 225 (488)
-.+++.+...++... ++... ......++|+|||.|.||..+|..+..-|. +|..||++.+... .+ ..
T Consensus 110 L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~---~~--~g 182 (334)
T 2pi1_A 110 LTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAFGM--KVLCYDVVKREDL---KE--KG 182 (334)
T ss_dssp HHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCHHH---HH--TT
T ss_pred HHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHCcC--EEEEECCCcchhh---Hh--cC
Confidence 467788877775532 21110 024457899999999999999998876676 9999999875431 11 11
Q ss_pred CCCCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 226 APFLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 226 ~~~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.. .++ +.+++||+|+++..... .++ .++ | . +.+....|.+++|+++-
T Consensus 183 --------~~~-~~l~ell~~aDvV~l~~P~t~---~t~-~li--~----~---~~l~~mk~gailIN~aR 231 (334)
T 2pi1_A 183 --------CVY-TSLDELLKESDVISLHVPYTK---ETH-HMI--N----E---ERISLMKDGVYLINTAR 231 (334)
T ss_dssp --------CEE-CCHHHHHHHCSEEEECCCCCT---TTT-TCB--C----H---HHHHHSCTTEEEEECSC
T ss_pred --------cee-cCHHHHHhhCCEEEEeCCCCh---HHH-Hhh--C----H---HHHhhCCCCcEEEECCC
Confidence 111 235 46889999999863211 111 111 1 1 22344467899999873
No 392
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=94.55 E-value=0.093 Score=55.13 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=61.1
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEE
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVII 251 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIi 251 (488)
.....++|+|+|.|.+|..+|..+..-|. +|+.+|+++.+..... .+. .++ .++ +.++.||||+.
T Consensus 243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa--~Viv~d~dp~~a~~A~---~~G------~~v---v~LeElL~~ADIVv~ 308 (464)
T 3n58_A 243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGA--RVKVTEVDPICALQAA---MDG------FEV---VTLDDAASTADIVVT 308 (464)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHH---HTT------CEE---CCHHHHGGGCSEEEE
T ss_pred CcccCCEEEEECcCHHHHHHHHHHHHCCC--EEEEEeCCcchhhHHH---hcC------cee---ccHHHHHhhCCEEEE
Confidence 45678899999999999999988876665 8999999886543211 111 111 244 56899999998
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
+.+.. + ++. .+.+....|.+++||++..
T Consensus 309 atgt~---~------------lI~--~e~l~~MK~GAILINvGRg 336 (464)
T 3n58_A 309 TTGNK---D------------VIT--IDHMRKMKDMCIVGNIGHF 336 (464)
T ss_dssp CCSSS---S------------SBC--HHHHHHSCTTEEEEECSSS
T ss_pred CCCCc---c------------ccC--HHHHhcCCCCeEEEEcCCC
Confidence 75321 1 110 1223334578989988754
No 393
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=94.55 E-value=0.16 Score=48.22 Aligned_cols=111 Identities=14% Similarity=0.214 Sum_probs=68.2
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc----ccC-
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA----MSE- 244 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e----al~- 244 (488)
++.++|.|+|| |.+|..++..|+..|. +|++.|++++ +....++.... .++. ...| .+ .++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~--~~~~~~l~~~~-----~~~~~~~~D~~~~~~v~~~~~~ 72 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGA--NIVLNGFGDP--APALAEIARHG-----VKAVHHPADLSDVAQIEALFAL 72 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEECSSCC--HHHHHHHHTTS-----CCEEEECCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCch--HHHHHHHHhcC-----CceEEEeCCCCCHHHHHHHHHH
Confidence 34578899998 9999999999999987 8999999765 33344443311 1222 2223 21 233
Q ss_pred ------CCcEEEEecccccCC---Ccc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 245 ------GSRIVIITAGVRSLV---GET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 245 ------dADiVIitag~~~k~---G~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.|++|..+|..... ..+ ....+..|+. ..+.+.+.+.+.. .+.||+++-
T Consensus 73 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS 138 (255)
T 2q2v_A 73 AEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIAS 138 (255)
T ss_dssp HHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcC
Confidence 799999999864321 111 2234555655 5566666666543 355777664
No 394
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=94.53 E-value=0.19 Score=48.41 Aligned_cols=112 Identities=21% Similarity=0.218 Sum_probs=69.1
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc---------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA--------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e--------- 241 (488)
++.++|.|+|+ |.+|..++..|+..|. .|++.|++++.++....++... ..+ ...| .+
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~-~~~Dv~d~~~v~~~~~~~ 95 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGA--IVGLHGTREDKLKEIAADLGKD------VFV-FSANLSDRKSIKQLAEVA 95 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCSS------EEE-EECCTTSHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCc------eEE-EEeecCCHHHHHHHHHHH
Confidence 35567888898 9999999999999987 8999999998877655544211 111 1222 21
Q ss_pred --ccCCCcEEEEecccccCC---Ccc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeCC
Q psy12825 242 --MSEGSRIVIITAGVRSLV---GET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 242 --al~dADiVIitag~~~k~---G~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TNP 296 (488)
.+...|++|..+|..... ..+ -...+..|+.- .+.+.+.+.+.. .+.||+++--
T Consensus 96 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~ 161 (266)
T 3grp_A 96 EREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSI 161 (266)
T ss_dssp HHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCH
Confidence 124789999999865321 122 12334455443 555666665543 3556766543
No 395
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=94.53 E-value=0.33 Score=47.03 Aligned_cols=115 Identities=17% Similarity=0.219 Sum_probs=71.0
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC-ChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-NEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A------ 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di-~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e------ 241 (488)
.++.+++.|+|| |.+|..++..|+..|. +|++.|+ +.+.++....++.... ..++. ...|. +
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~ 95 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGA--NIVLNGFGAPDEIRTVTDEVAGLS----SGTVLHHPADMTKPSEIADMM 95 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEECCCCHHHHHHHHHHHHTTC----SSCEEEECCCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHhhcc----CCcEEEEeCCCCCHHHHHHHH
Confidence 445678899998 9999999999999987 8999999 6676766666665421 11222 22232 1
Q ss_pred -----ccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 -----MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 -----al~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 96 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS 163 (281)
T 3v2h_A 96 AMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIAS 163 (281)
T ss_dssp HHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECC
Confidence 1347899999998753221 122 223444543 4455555555543 355666653
No 396
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=94.51 E-value=0.032 Score=55.24 Aligned_cols=66 Identities=21% Similarity=0.136 Sum_probs=45.6
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-cC--CCcEEEEe
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-SE--GSRIVIIT 252 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l~--dADiVIit 252 (488)
+++||+|||+|.+|..++..|...+-..-+.++|+++++++. .. .. +...+|+++ ++ ++|+|+++
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~-------~~---~~--~~~~~~~~~~l~~~~~D~V~i~ 76 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLAL-------VP---PG--CVIESDWRSVVSAPEVEAVIIA 76 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTT-------CC---TT--CEEESSTHHHHTCTTCCEEEEE
T ss_pred CcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHH-------HH---hh--CcccCCHHHHhhCCCCCEEEEe
Confidence 467999999999999888888775322234589999875542 11 11 234567754 54 89999999
Q ss_pred c
Q psy12825 253 A 253 (488)
Q Consensus 253 a 253 (488)
.
T Consensus 77 t 77 (315)
T 3c1a_A 77 T 77 (315)
T ss_dssp S
T ss_pred C
Confidence 5
No 397
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.49 E-value=0.021 Score=53.91 Aligned_cols=95 Identities=16% Similarity=0.238 Sum_probs=58.5
Q ss_pred CCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----c-ccCCCcE
Q psy12825 176 PDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----A-MSEGSRI 248 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----e-al~dADi 248 (488)
..++|.|+|+|.+|..++..|...+. ++++|.++++++... .. ..+... +|. + .+.+||.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~---v~vid~~~~~~~~~~---~~-------~~~i~gd~~~~~~l~~a~i~~ad~ 74 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV---FVLAEDENVRKKVLR---SG-------ANFVHGDPTRVSDLEKANVRGARA 74 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE---EEEESCGGGHHHHHH---TT-------CEEEESCTTCHHHHHHTTCTTCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe---EEEEECCHHHHHHHh---cC-------CeEEEcCCCCHHHHHhcCcchhcE
Confidence 34689999999999999988866653 899999988765432 11 122221 222 2 3889999
Q ss_pred EEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCc-EEEEEeCCch
Q psy12825 249 VIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDC-ILLIISNPVD 298 (488)
Q Consensus 249 VIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a-~vIv~TNPvd 298 (488)
||++.+. + ..|.. ++..+++..|+. ++..+.||.+
T Consensus 75 vi~~~~~---------d--~~n~~----~~~~a~~~~~~~~iia~~~~~~~ 110 (234)
T 2aef_A 75 VIVDLES---------D--SETIH----CILGIRKIDESVRIIAEAERYEN 110 (234)
T ss_dssp EEECCSC---------H--HHHHH----HHHHHHHHCSSSEEEEECSSGGG
T ss_pred EEEcCCC---------c--HHHHH----HHHHHHHHCCCCeEEEEECCHhH
Confidence 9998521 1 12322 344455567774 4445556765
No 398
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=94.49 E-value=0.0089 Score=62.90 Aligned_cols=72 Identities=15% Similarity=0.085 Sum_probs=48.5
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-E-cCCc----cccCCCcE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-S-GSDI----AMSEGSRI 248 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~-ttd~----eal~dADi 248 (488)
|++++|.|+|+|.+|..++..|+..+. +|+++|++.++++..+..+. ..... . .+|. +.++++|+
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~G~--~V~v~~R~~~~a~~la~~~~-------~~~~~~~Dv~d~~~l~~~l~~~Dv 71 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDSGI--KVTVACRTLESAKKLSAGVQ-------HSTPISLDVNDDAALDAEVAKHDL 71 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTTTC--EEEEEESSHHHHHHTTTTCT-------TEEEEECCTTCHHHHHHHHTTSSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcC--EEEEEECCHHHHHHHHHhcC-------CceEEEeecCCHHHHHHHHcCCcE
Confidence 346789999999999999999997775 79999999876653221111 01111 1 1222 34789999
Q ss_pred EEEeccc
Q psy12825 249 VIITAGV 255 (488)
Q Consensus 249 VIitag~ 255 (488)
||.+++.
T Consensus 72 VIn~a~~ 78 (450)
T 1ff9_A 72 VISLIPY 78 (450)
T ss_dssp EEECCC-
T ss_pred EEECCcc
Confidence 9999853
No 399
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=94.47 E-value=0.25 Score=45.96 Aligned_cols=43 Identities=19% Similarity=0.150 Sum_probs=35.8
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHH
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDL 222 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL 222 (488)
++|.|+|| |.+|..++..|+..|. +|++.|++++.++....++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~ 45 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGK--ATYLTGRSESKLSTVTNCL 45 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHTC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHH
Confidence 46889998 9999999999999986 7999999998877655444
No 400
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=94.44 E-value=0.39 Score=46.43 Aligned_cols=111 Identities=16% Similarity=0.135 Sum_probs=68.6
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc---------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA--------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e--------- 241 (488)
++.+++.|+|| |.+|.+++..|+..|. +|++.|++++.++....++... ... ...| .+
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~-~~~Dv~d~~~v~~~~~~~ 95 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGA--YVVVADVNEDAAVRVANEIGSK------AFG-VRVDVSSAKDAESMVEKT 95 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHCTT------EEE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCc------eEE-EEecCCCHHHHHHHHHHH
Confidence 45567888998 9999999999999987 8999999998777655554211 111 1122 11
Q ss_pred --ccCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|..... ..+. ...+.-|+. +.+.+.+.+.+. ..+.||+++-
T Consensus 96 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS 160 (277)
T 4dqx_A 96 TAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-GGGSIINTTS 160 (277)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECC
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECc
Confidence 123789999999864321 1122 223445544 344555555443 3456777753
No 401
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=94.43 E-value=0.1 Score=49.59 Aligned_cols=111 Identities=9% Similarity=0.024 Sum_probs=65.4
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc--------cccCCCcE
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI--------AMSEGSRI 248 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~--------eal~dADi 248 (488)
++|.|+|+ |.+|..++..|+..|. +|++.|++++.++.... +.... ......-..+. +.+...|+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~-l~~~~---~~~~~~d~~~v~~~~~~~~~~~g~iD~ 75 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGH--TVACHDESFKQKDELEA-FAETY---PQLKPMSEQEPAELIEAVTSAYGQVDV 75 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTC--EEEECCGGGGSHHHHHH-HHHHC---TTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH-HHhcC---CcEEEECHHHHHHHHHHHHHHhCCCCE
Confidence 46888898 9999999999999987 89999998877765433 54321 01111101111 12347899
Q ss_pred EEEecccc-cC-C--Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 249 VIITAGVR-SL-V--GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 249 VIitag~~-~k-~--G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+|..+|.. .. + ..+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS 132 (254)
T 1zmt_A 76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITS 132 (254)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECC
Confidence 99999865 21 1 1111 223444543 4455555555443 355777654
No 402
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=94.43 E-value=0.4 Score=46.77 Aligned_cols=115 Identities=16% Similarity=0.132 Sum_probs=69.9
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCCh--hHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c-----
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNE--DRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A----- 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~--e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e----- 241 (488)
.++.+++.|+|+ |.+|.+++..|+..|. +|++.|++. +.++.....+.... .++. ...|. +
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~ 118 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEECG-----RKAVLLPGDLSDESFARSL 118 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHTT-----CCEEECCCCTTSHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHcC-----CcEEEEEecCCCHHHHHHH
Confidence 345678999998 9999999999999987 899999863 34444444443321 1222 12232 1
Q ss_pred ------ccCCCcEEEEecccccCCC----cc---hHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeC
Q psy12825 242 ------MSEGSRIVIITAGVRSLVG----ET---RLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISN 295 (488)
Q Consensus 242 ------al~dADiVIitag~~~k~G----~~---r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TN 295 (488)
.+...|++|..+|.....+ .+ -...+.-|+.-...+.+.+... ...+.||+++-
T Consensus 119 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 119 VHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 1347899999998643211 12 2334566665555556655544 23466777753
No 403
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=94.42 E-value=0.37 Score=46.62 Aligned_cols=47 Identities=17% Similarity=0.201 Sum_probs=38.6
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCCh-hHHHHHHHHHh
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNE-DRCKGEMLDLQ 223 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~-e~l~g~~~dL~ 223 (488)
++.+++.|+|| |.+|..++..|+..|. +|+++|+++ +.++....++.
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~~l~ 69 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGY--RVVIHYHNSAEAAVSLADELN 69 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTC--EEEEEESSCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHH
Confidence 45577888898 9999999999999986 899999988 77776666664
No 404
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=94.42 E-value=0.037 Score=54.91 Aligned_cols=68 Identities=16% Similarity=0.096 Sum_probs=45.5
Q ss_pred CceEEEEecccchH-HHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcccc-CCCcEEEEec
Q psy12825 177 DQKITVVGAGQVGM-ACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMS-EGSRIVIITA 253 (488)
Q Consensus 177 ~~KIaIIGAG~vG~-~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal-~dADiVIita 253 (488)
++||+|||+|.+|. .++..|...+- .+|+++|+++++++..+..+. . .. ..+++.+.+ .++|+|+++.
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~-~~l~v~d~~~~~~~~~a~~~g-~------~~-~~~~~~~~l~~~~D~V~i~t 71 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPD-IELVLCTRNPKVLGTLATRYR-V------SA-TCTDYRDVLQYGVDAVMIHA 71 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTT-EEEEEECSCHHHHHHHHHHTT-C------CC-CCSSTTGGGGGCCSEEEECS
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHHcC-C------Cc-cccCHHHHhhcCCCEEEEEC
Confidence 46999999999998 47777755321 267799999988765443321 0 11 122334566 7899999996
No 405
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=94.42 E-value=0.02 Score=57.61 Aligned_cols=72 Identities=11% Similarity=0.136 Sum_probs=47.8
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcC----CC--Ce-EEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-c-
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQG----IY--SN-FCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-S- 243 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~----l~--~e-l~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l- 243 (488)
+.|++.+|+|||+|.+|...+..+...+ +. .+ +.++|+++++++..+.++.- . ...+|+++ |
T Consensus 2 ~~M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~-------~--~~~~d~~~ll~ 72 (390)
T 4h3v_A 2 NAMTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGW-------S--TTETDWRTLLE 72 (390)
T ss_dssp --CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTC-------S--EEESCHHHHTT
T ss_pred CCCCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCC-------C--cccCCHHHHhc
Confidence 4567789999999999987766665431 11 13 45889999988766555421 1 23468754 4
Q ss_pred -CCCcEEEEec
Q psy12825 244 -EGSRIVIITA 253 (488)
Q Consensus 244 -~dADiVIita 253 (488)
.+.|+|+++.
T Consensus 73 ~~~iDaV~I~t 83 (390)
T 4h3v_A 73 RDDVQLVDVCT 83 (390)
T ss_dssp CTTCSEEEECS
T ss_pred CCCCCEEEEeC
Confidence 4689999985
No 406
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=94.42 E-value=0.03 Score=53.20 Aligned_cols=55 Identities=13% Similarity=0.193 Sum_probs=41.3
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeE-EEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-c-CCCcEEEEec
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNF-CLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-S-EGSRIVIITA 253 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el-~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l-~dADiVIita 253 (488)
+||+|||+|.||..++..|...++ +| .++|.++ +.+. ...|+++ + .++|+||++.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~--~lv~v~d~~~-~~~~------------------~~~~~~~l~~~~~DvVv~~~ 58 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGF--EIAAILDVRG-EHEK------------------MVRGIDEFLQREMDVAVEAA 58 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEEECSSC-CCTT------------------EESSHHHHTTSCCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHhcCCC--EEEEEEecCc-chhh------------------hcCCHHHHhcCCCCEEEECC
Confidence 589999999999999998886565 76 6899874 2210 2356643 4 6999999996
No 407
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.41 E-value=0.041 Score=56.12 Aligned_cols=74 Identities=16% Similarity=0.174 Sum_probs=50.7
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc-cccCCCcEEEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI-AMSEGSRIVII 251 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~-eal~dADiVIi 251 (488)
.+.++|+|+|+|.+|..++..+...|. +|+++|+++++++.....+.. ......+ .+. +.++++|+||.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga--~V~~~d~~~~~~~~~~~~~g~------~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA--QVTILDVNHKRLQYLDDVFGG------RVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTT------SEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHhcCc------eEEEecCCHHHHHHHHhCCCEEEE
Confidence 567899999999999999998888786 899999998877643222210 1011111 122 45789999999
Q ss_pred ecccc
Q psy12825 252 TAGVR 256 (488)
Q Consensus 252 tag~~ 256 (488)
+++.+
T Consensus 236 ~~g~~ 240 (369)
T 2eez_A 236 AVLVP 240 (369)
T ss_dssp CCC--
T ss_pred CCCCC
Confidence 98654
No 408
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=94.40 E-value=0.039 Score=54.89 Aligned_cols=112 Identities=14% Similarity=0.008 Sum_probs=68.5
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---c----cccCC--
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---I----AMSEG-- 245 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~----eal~d-- 245 (488)
+.++|.|+|| |.+|++++..|+..|. +|+++|++.+........+.. .....+. ..| . +.+++
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~-~~Dl~d~~~~~~~~~~~~ 80 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGA--TVKGYSLTAPTVPSLFETARV----ADGMQSE-IGDIRDQNKLLESIREFQ 80 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCSSSSCHHHHTTT----TTTSEEE-ECCTTCHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC--eEEEEeCCCcccchhhHhhcc----CCceEEE-EccccCHHHHHHHHHhcC
Confidence 4579999998 9999999999999886 899999876543322222211 1112222 223 2 23454
Q ss_pred CcEEEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 246 SRIVIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 246 ADiVIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
.|+||.+++.+... .....+.+..|+.-...+.+.+.+...-..+|++|
T Consensus 81 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S 131 (357)
T 1rkx_A 81 PEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT 131 (357)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred CCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEec
Confidence 89999998753211 11233456677777777777776654233455554
No 409
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=94.39 E-value=0.14 Score=51.56 Aligned_cols=117 Identities=13% Similarity=0.178 Sum_probs=70.3
Q ss_pred hhhHHHHHHHHHHHH-hhhC----C--CCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhh
Q psy12825 152 QTMARDAVSTVDRLL-SQVA----P--SIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQH 224 (488)
Q Consensus 152 k~la~eivlid~~~~-~e~~----~--~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~ 224 (488)
-.+++.+...+.... ++.. . ......++|+|||.|.||..+|..+..-|. +|+.||++....+. ..++.
T Consensus 113 L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~-~~~~g- 188 (330)
T 4e5n_A 113 VGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQGWGA--TLQYHEAKALDTQT-EQRLG- 188 (330)
T ss_dssp HHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTTSCC--EEEEECSSCCCHHH-HHHHT-
T ss_pred HHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHHCCC--EEEEECCCCCcHhH-HHhcC-
Confidence 457777777765432 2221 0 034567899999999999999888755555 89999997633221 11211
Q ss_pred cCCCCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 225 GAPFLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 225 ~~~~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.. .++ +.++.||+|+++..... .++ .++ | .+.+....|.+++|+++.
T Consensus 189 ---------~~~-~~l~ell~~aDvV~l~~P~t~---~t~-~li--~-------~~~l~~mk~gailIN~ar 237 (330)
T 4e5n_A 189 ---------LRQ-VACSELFASSDFILLALPLNA---DTL-HLV--N-------AELLALVRPGALLVNPCR 237 (330)
T ss_dssp ---------EEE-CCHHHHHHHCSEEEECCCCST---TTT-TCB--C-------HHHHTTSCTTEEEEECSC
T ss_pred ---------cee-CCHHHHHhhCCEEEEcCCCCH---HHH-HHh--C-------HHHHhhCCCCcEEEECCC
Confidence 122 245 46889999999863211 011 111 1 123445568899999973
No 410
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=94.38 E-value=0.22 Score=47.62 Aligned_cols=114 Identities=18% Similarity=0.196 Sum_probs=69.1
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEE-eCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLI-DSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~-Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~---e-------- 241 (488)
++.+++.|+|+ |.+|..++..|+..|. +|++. +.+.+.++....++.... ..... ...|. +
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~Dv~~~~~v~~~~~~ 79 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIEKLG---RSALA-IKADLTNAAEVEAAISA 79 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHTTT---SCCEE-EECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC---CceEE-EEcCCCCHHHHHHHHHH
Confidence 45678999998 8999999999999987 78887 667776666666665431 11222 22232 1
Q ss_pred ---ccCCCcEEEEeccccc--CC--Ccch---HhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEe
Q psy12825 242 ---MSEGSRIVIITAGVRS--LV--GETR---LQLVDRNVKIFKDLIPKIAKG-SPDCILLIIS 294 (488)
Q Consensus 242 ---al~dADiVIitag~~~--k~--G~~r---~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~T 294 (488)
.+...|++|..+|... .+ ..+. ...+.-|+.-...+.+.+... .+.+.||+++
T Consensus 80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 80 AADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 1237899999987542 11 1222 234555655444555554443 2245667665
No 411
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.35 E-value=0.006 Score=60.73 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=29.8
Q ss_pred CcEEEEecchhHHHHHHHHHhhhhHHHHHHHH
Q psy12825 131 QKITVVGAGQVGMACTYSILTQTMARDAVSTV 162 (488)
Q Consensus 131 ~ki~vvg~g~vg~~~a~~~~~k~la~eivlid 162 (488)
.||+|||+|++|.++|+.+..+++++|++++|
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D 32 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVD 32 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEE
Confidence 38999999999999999999999999999877
No 412
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=94.34 E-value=0.036 Score=58.93 Aligned_cols=68 Identities=22% Similarity=0.253 Sum_probs=43.6
Q ss_pred ceEEEEecccchHHHHHHHHHc------CCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEE
Q psy12825 178 QKITVVGAGQVGMACTYSILTQ------GIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVI 250 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~------~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVI 250 (488)
+||+|||.|.||.+++..|... |+ +|++.+.+..+....+.+. . +...... ..+. +++++||+||
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~--~ViVg~r~~sks~e~A~e~--G--~~v~d~t--a~s~aEAa~~ADVVI 126 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKIGLRKGSKSFDEARAA--G--FTEESGT--LGDIWETVSGSDLVL 126 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCC--EEEEEECTTCSCHHHHHHT--T--CCTTTTC--EEEHHHHHHHCSEEE
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCC--EEEEEeCCchhhHHHHHHC--C--CEEecCC--CCCHHHHHhcCCEEE
Confidence 7999999999999999999887 66 7766655433222222222 1 1100010 1233 6789999999
Q ss_pred Eec
Q psy12825 251 ITA 253 (488)
Q Consensus 251 ita 253 (488)
++.
T Consensus 127 LaV 129 (525)
T 3fr7_A 127 LLI 129 (525)
T ss_dssp ECS
T ss_pred ECC
Confidence 996
No 413
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=94.32 E-value=0.3 Score=47.11 Aligned_cols=116 Identities=13% Similarity=0.093 Sum_probs=70.9
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc-------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA------- 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e------- 241 (488)
.++.+++.|+|+ |.+|..++..|+..|. +|+++|++.+.++....++..... .++. ...| .+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~ 97 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC--HTVIASRSLPRVLTAARKLAGATG----RRCLPLSMDVRAPPAVMAAVD 97 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHHHS----SCEEEEECCTTCHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHH
Confidence 345678999998 8999999999999887 899999999888777777654211 1111 1223 21
Q ss_pred ----ccCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 242 ----MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 242 ----al~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
.+...|++|..+|...... .+ -...+..|+. +.+.+.+.+.+. ..+.||+++-.
T Consensus 98 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~ 165 (277)
T 4fc7_A 98 QALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-HGGVIVNITAT 165 (277)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCS
T ss_pred HHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECch
Confidence 1337899999998543211 12 1223444543 334444444332 24667777643
No 414
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=94.31 E-value=0.007 Score=60.51 Aligned_cols=30 Identities=33% Similarity=0.545 Sum_probs=28.6
Q ss_pred cEEEEecchhHHHHHHHHHhhhhHHHHHHHH
Q psy12825 132 KITVVGAGQVGMACTYSILTQTMARDAVSTV 162 (488)
Q Consensus 132 ki~vvg~g~vg~~~a~~~~~k~la~eivlid 162 (488)
||+|||+|+||.++||.++.+++ +|++++|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l-~el~L~D 30 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY-DDLLLIA 30 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-SCEEEEC
T ss_pred CEEEECcCHHHHHHHHHHHhCCC-CEEEEEc
Confidence 89999999999999999999999 8899988
No 415
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=94.30 E-value=0.073 Score=53.61 Aligned_cols=116 Identities=11% Similarity=0.168 Sum_probs=71.5
Q ss_pred hhhHHHHHHHHHHH-HhhhCCC--CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCC
Q psy12825 152 QTMARDAVSTVDRL-LSQVAPS--IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF 228 (488)
Q Consensus 152 k~la~eivlid~~~-~~e~~~~--~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~ 228 (488)
-.+++.+...+... .++.... .....++|+|||.|.||..+|..+..-|. +|..||++......
T Consensus 112 L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~----------- 178 (324)
T 3hg7_A 112 LSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGM--KVLGVSRSGRERAG----------- 178 (324)
T ss_dssp HHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCCCTT-----------
T ss_pred HHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhCCC--EEEEEcCChHHhhh-----------
Confidence 35778887777543 2222111 34567899999999999999999877676 89999987632110
Q ss_pred CCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 229 LRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 229 ~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
........++ +.+++||+|+++..... .++ .++ | .+.+....|.+++|+++-
T Consensus 179 --~~~~~~~~~l~ell~~aDvV~l~lPlt~---~T~-~li--~-------~~~l~~mk~gailIN~aR 231 (324)
T 3hg7_A 179 --FDQVYQLPALNKMLAQADVIVSVLPATR---ETH-HLF--T-------ASRFEHCKPGAILFNVGR 231 (324)
T ss_dssp --CSEEECGGGHHHHHHTCSEEEECCCCCS---SST-TSB--C-------TTTTTCSCTTCEEEECSC
T ss_pred --hhcccccCCHHHHHhhCCEEEEeCCCCH---HHH-HHh--H-------HHHHhcCCCCcEEEECCC
Confidence 0122223455 46889999999863211 111 111 1 112344567899999873
No 416
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=94.30 E-value=0.029 Score=56.09 Aligned_cols=65 Identities=11% Similarity=0.194 Sum_probs=45.6
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcccc-CCCcEEEEec
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMS-EGSRIVIITA 253 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal-~dADiVIita 253 (488)
|+++||+|||+|.||..++..+...+-..-+.++|+++++ . +. ..+..++|++++ .++|+||++.
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~-----~~--------~gv~~~~d~~~ll~~~DvViiat 66 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-D-----TK--------TPVFDVADVDKHADDVDVLFLCM 66 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-S-----SS--------SCEEEGGGGGGTTTTCSEEEECS
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-h-----hc--------CCCceeCCHHHHhcCCCEEEEcC
Confidence 4578999999999999988877665322234688988654 1 11 124456677654 7999999985
No 417
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.29 E-value=0.28 Score=46.39 Aligned_cols=109 Identities=14% Similarity=0.053 Sum_probs=65.7
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCcc-----------
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIA----------- 241 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~e----------- 241 (488)
+.+++.|+|| |.+|..++..|+..|. +|++.|++++.++....++. ...... +|.+
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~~~~~~~~~~~ 73 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGA--RLVACDIEEGPLREAAEAVG--------AHPVVMDVADPASVERGFAEALA 73 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTTT--------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHcC--------CEEEEecCCCHHHHHHHHHHHHH
Confidence 4578999998 9999999999999987 89999999877664433221 111111 1221
Q ss_pred ccCCCcEEEEecccccCCC---cc---hHhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVKI----FKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 al~dADiVIitag~~~k~G---~~---r~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|.++|...... .+ -...+..|+.- .+.+.+.+.+. ..+.||+++-
T Consensus 74 ~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS 136 (245)
T 1uls_A 74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTAS 136 (245)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEcc
Confidence 1235899999998653211 11 22344555543 34444444433 3456777653
No 418
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=94.28 E-value=0.64 Score=44.72 Aligned_cols=116 Identities=15% Similarity=0.175 Sum_probs=68.1
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCC-hhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc----c--
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSN-EDRCKGEMLDLQHGAPFLRSPKIESGSD---IA----M-- 242 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~-~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e----a-- 242 (488)
..+.+++.|+|| |.+|..++..|+..|. +|++.|.+ .++++....++.... .... ....| .+ .
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~l~~~~---~~~~-~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGA--AVALTYVNAAERAQAVVSEIEQAG---GRAV-AIRADNRDAEAIEQAIR 101 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT---CCEE-EEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC---CcEE-EEECCCCCHHHHHHHHH
Confidence 356678999998 8999999999999987 78888664 466666666665431 1111 12223 21 1
Q ss_pred -----cCCCcEEEEecccccCCC---cc---hHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeC
Q psy12825 243 -----SEGSRIVIITAGVRSLVG---ET---RLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISN 295 (488)
Q Consensus 243 -----l~dADiVIitag~~~k~G---~~---r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TN 295 (488)
+...|++|..+|...... .+ -...+..|+.-...+.+.+... .+.+.||+++-
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 237899999998753221 12 2233455544333333333332 23456777653
No 419
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=94.27 E-value=0.04 Score=54.81 Aligned_cols=65 Identities=14% Similarity=0.179 Sum_probs=46.1
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEE-EEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc-ccC--CCcEEEEe
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFC-LIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA-MSE--GSRIVIIT 252 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~-L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e-al~--dADiVIit 252 (488)
++||+|||+|.+|...+..+...+-. +|+ ++|+++++++..+.... +. .+|++ .++ ++|+|+++
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~----------~~-~~~~~~~l~~~~~D~V~i~ 70 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADA-RLVAVADAFPAAAEAIAGAYG----------CE-VRTIDAIEAAADIDAVVIC 70 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTT----------CE-ECCHHHHHHCTTCCEEEEC
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCc-EEEEEECCCHHHHHHHHHHhC----------CC-cCCHHHHhcCCCCCEEEEe
Confidence 47999999999999988888765322 554 89999987765443321 11 45664 344 89999998
Q ss_pred c
Q psy12825 253 A 253 (488)
Q Consensus 253 a 253 (488)
.
T Consensus 71 t 71 (331)
T 4hkt_A 71 T 71 (331)
T ss_dssp S
T ss_pred C
Confidence 5
No 420
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=94.27 E-value=0.16 Score=48.22 Aligned_cols=114 Identities=11% Similarity=0.084 Sum_probs=68.5
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC-ChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc----ccC
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-NEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA----MSE 244 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di-~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e----al~ 244 (488)
++.++|.|+|| |.+|..++..|+..|. +|++.|. +.+.++....++.... .++. ...| .+ .++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~~~~~~~ 91 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKLG-----AQGVAIQADISKPSEVVALFD 91 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT-----CCEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhcC-----CcEEEEEecCCCHHHHHHHHH
Confidence 45678999998 9999999999999986 8999998 7777766666665421 1221 1223 21 222
Q ss_pred -------CCcEEEEecccccCC---Ccc---hHhhHhhhHHHHHHHHHHHhccC-CCcEEEEEeC
Q psy12825 245 -------GSRIVIITAGVRSLV---GET---RLQLVDRNVKIFKDLIPKIAKGS-PDCILLIISN 295 (488)
Q Consensus 245 -------dADiVIitag~~~k~---G~~---r~dll~~N~~ii~ei~~~I~~~~-p~a~vIv~TN 295 (488)
+.|+||.+++..... ..+ ..+.+..|+.-...+.+.+.+.. ..+.+|+++-
T Consensus 92 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS 156 (274)
T 1ja9_A 92 KAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS 156 (274)
T ss_dssp HHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcC
Confidence 789999998864321 111 12344555554444444433321 1255666653
No 421
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.27 E-value=0.058 Score=52.39 Aligned_cols=72 Identities=15% Similarity=0.212 Sum_probs=48.6
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCC-----hhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccC
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSN-----EDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSE 244 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~-----~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~ 244 (488)
++||.|+|| |.+|..++..|+..+. +|++++++ +++.+. ...+... ...+... +|+ ++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~-~~~~~~~-----~~~~~~~D~~d~~~l~~~~~ 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH--PTYVLFRPEVVSNIDKVQM-LLYFKQL-----GAKLIEASLDDHQRLVDALK 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCSCCSSCHHHHHH-HHHHHTT-----TCEEECCCSSCHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC--cEEEEECCCcccchhHHHH-HHHHHhC-----CeEEEeCCCCCHHHHHHHHh
Confidence 578999998 9999999999999885 89999987 333322 1222211 1222211 122 4688
Q ss_pred CCcEEEEecccc
Q psy12825 245 GSRIVIITAGVR 256 (488)
Q Consensus 245 dADiVIitag~~ 256 (488)
++|+||.+++..
T Consensus 76 ~~d~vi~~a~~~ 87 (313)
T 1qyd_A 76 QVDVVISALAGG 87 (313)
T ss_dssp TCSEEEECCCCS
T ss_pred CCCEEEECCccc
Confidence 999999998653
No 422
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.26 E-value=0.051 Score=56.41 Aligned_cols=42 Identities=24% Similarity=0.286 Sum_probs=35.9
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHH
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKG 217 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g 217 (488)
..++.||+|||+|.+|...+..+...|. +|..+|+++++++.
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~ 228 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGA--VVSATDVRPAAKEQ 228 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSTTHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC--EEEEEcCCHHHHHH
Confidence 3467899999999999999888877776 89999999988764
No 423
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=94.24 E-value=0.53 Score=45.23 Aligned_cols=114 Identities=14% Similarity=0.230 Sum_probs=68.9
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCC------------hhHHHHHHHHHhhcCCCCCCCcEE-EcCC
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSN------------EDRCKGEMLDLQHGAPFLRSPKIE-SGSD 239 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~------------~e~l~g~~~dL~~~~~~~~~~~v~-~ttd 239 (488)
.++.+++.|+|+ |.+|.+++..|+..|. +|+++|++ .+.++.....+.... .++. ...|
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D 79 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGA--DIAICDRCENSDVVGYPLATADDLAETVALVEKTG-----RRCISAKVD 79 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-----CCEEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCccccccccccccHHHHHHHHHHHHhcC-----CeEEEEeCC
Confidence 345678999998 9999999999999987 89999986 455555444454321 1221 1223
Q ss_pred ---cc-----------ccCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 240 ---IA-----------MSEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 240 ---~e-----------al~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+ .+...|++|..+|..... ..+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 80 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS 158 (281)
T 3s55_A 80 VKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSS 158 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECC
Confidence 21 123789999999865321 1222 233445543 4455555555443 456777763
No 424
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=94.24 E-value=0.038 Score=55.40 Aligned_cols=67 Identities=19% Similarity=0.222 Sum_probs=46.3
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeE-EEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-cC--CCcEEEEe
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNF-CLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-SE--GSRIVIIT 252 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el-~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l~--dADiVIit 252 (488)
++||+|||+|.+|...+..|...+-. +| .++|+++++++..+.... .. ...+|+++ ++ ++|+|+++
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~-------~~--~~~~~~~~ll~~~~~D~V~i~ 71 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDA-ILYAISDVREDRLREMKEKLG-------VE--KAYKDPHELIEDPNVDAVLVC 71 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTE-EEEEEECSCHHHHHHHHHHHT-------CS--EEESSHHHHHHCTTCCEEEEC
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHhC-------CC--ceeCCHHHHhcCCCCCEEEEc
Confidence 46999999999999888777664322 55 488999988775544332 11 23457643 44 89999998
Q ss_pred c
Q psy12825 253 A 253 (488)
Q Consensus 253 a 253 (488)
.
T Consensus 72 t 72 (344)
T 3ezy_A 72 S 72 (344)
T ss_dssp S
T ss_pred C
Confidence 5
No 425
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.23 E-value=0.037 Score=58.75 Aligned_cols=93 Identities=14% Similarity=0.232 Sum_probs=62.1
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEE
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVII 251 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIi 251 (488)
.....++|+|||.|.||..+|..+...|. +|+.+|++....... .... .+ . .++ +.+++||+||.
T Consensus 253 ~~l~GktVgIIG~G~IG~~vA~~l~~~G~--~Viv~d~~~~~~~~a---~~~g------~~--~-~~l~ell~~aDiVi~ 318 (479)
T 1v8b_A 253 FLISGKIVVICGYGDVGKGCASSMKGLGA--RVYITEIDPICAIQA---VMEG------FN--V-VTLDEIVDKGDFFIT 318 (479)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHHTC--EEEEECSCHHHHHHH---HTTT------CE--E-CCHHHHTTTCSEEEE
T ss_pred cccCCCEEEEEeeCHHHHHHHHHHHhCcC--EEEEEeCChhhHHHH---HHcC------CE--e-cCHHHHHhcCCEEEE
Confidence 35678899999999999999998877676 899999998654211 1111 11 1 255 56899999999
Q ss_pred ecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCC
Q psy12825 252 TAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNP 296 (488)
Q Consensus 252 tag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNP 296 (488)
+.+.. + ++. .+.+....|.+++++++-.
T Consensus 319 ~~~t~---~------------lI~--~~~l~~MK~gailiNvgrg 346 (479)
T 1v8b_A 319 CTGNV---D------------VIK--LEHLLKMKNNAVVGNIGHF 346 (479)
T ss_dssp CCSSS---S------------SBC--HHHHTTCCTTCEEEECSST
T ss_pred CCChh---h------------hcC--HHHHhhcCCCcEEEEeCCC
Confidence 85211 1 111 1233445678988888743
No 426
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=94.23 E-value=0.22 Score=47.03 Aligned_cols=115 Identities=17% Similarity=0.122 Sum_probs=66.7
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++.+.......++.... . .++. ...|. +
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~--~~~~~~~~Dl~~~~~~~~~~~~ 85 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA--NVAVIYRSAADAVEVTEKVGKEF--G--VKTKAYQCDVSNTDIVTKTIQQ 85 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSCTTHHHHHHHHHHHH--T--CCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCcchhhHHHHHHHHHhc--C--CeeEEEEeeCCCHHHHHHHHHH
Confidence 45678999998 9999999999999986 89999996655544444443221 0 1121 12232 1
Q ss_pred ---ccCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|+||.+++...... .+ ....+..|+. +.+.+.+.+.+....+.+|+++-
T Consensus 86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 152 (265)
T 1h5q_A 86 IDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSS 152 (265)
T ss_dssp HHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCC
Confidence 1345899999988643211 11 1223444543 33444444444333455666653
No 427
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.22 E-value=0.091 Score=54.11 Aligned_cols=81 Identities=15% Similarity=0.068 Sum_probs=52.6
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhc-CCCC-----CCCcEE---------EcC
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHG-APFL-----RSPKIE---------SGS 238 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~-~~~~-----~~~~v~---------~tt 238 (488)
..++.||+|||+|.+|...+..+...|. +|..+|+++++++.. .++... .... ...... ...
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~-~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~ 257 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGA--KTTGYDVRPEVAEQV-RSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQ 257 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTC--EEEEECSSGGGHHHH-HHTTCEECCCC-------------CHHHHHHHHH
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHH-HHcCCeEEeccccccccccchhhhhHHHHhhhHH
Confidence 3467899999999999999888877776 899999999887643 333211 0000 000000 001
Q ss_pred Cc-cccCCCcEEEEeccccc
Q psy12825 239 DI-AMSEGSRIVIITAGVRS 257 (488)
Q Consensus 239 d~-eal~dADiVIitag~~~ 257 (488)
++ +.+++||+||.++..|.
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg 277 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPG 277 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTT
T ss_pred HHHHHHhcCCEEEECCCCCC
Confidence 23 46899999999876553
No 428
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.16 E-value=0.19 Score=50.85 Aligned_cols=75 Identities=15% Similarity=0.288 Sum_probs=53.2
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCCh-------------------hHHHHHHHHHhhcCCCCCCCcEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNE-------------------DRCKGEMLDLQHGAPFLRSPKIE 235 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~-------------------e~l~g~~~dL~~~~~~~~~~~v~ 235 (488)
.+..+|+|||+|.+|+.++..|+..|+ .+|.|+|.+. .+++..+..+.... +..++.
T Consensus 34 L~~~~VlivG~GGlG~~ia~~La~~Gv-g~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln---p~v~v~ 109 (346)
T 1y8q_A 34 LRASRVLLVGLKGLGAEIAKNLILAGV-KGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN---PMVDVK 109 (346)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC---TTSEEE
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCC-CEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC---CCeEEE
Confidence 345699999999999999999999996 5899998532 25555566666542 234454
Q ss_pred EcC-Cc-----cccCCCcEEEEec
Q psy12825 236 SGS-DI-----AMSEGSRIVIITA 253 (488)
Q Consensus 236 ~tt-d~-----eal~dADiVIita 253 (488)
... +. +-++++|+||.+.
T Consensus 110 ~~~~~~~~~~~~~~~~~dvVv~~~ 133 (346)
T 1y8q_A 110 VDTEDIEKKPESFFTQFDAVCLTC 133 (346)
T ss_dssp EECSCGGGCCHHHHTTCSEEEEES
T ss_pred EEecccCcchHHHhcCCCEEEEcC
Confidence 332 22 3478999999985
No 429
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.16 E-value=0.11 Score=54.22 Aligned_cols=76 Identities=17% Similarity=0.158 Sum_probs=52.9
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcc-ccCC-CcEEEEe
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIA-MSEG-SRIVIIT 252 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~e-al~d-ADiVIit 252 (488)
.+.+||.|||.|..|.+.|..|...|. +|..+|.++.........|... ..++....+.+ .+.+ +|+||.+
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~--~V~~~D~~~~~~~~~~~~L~~~-----gi~~~~g~~~~~~~~~~~d~vv~s 79 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGA--IVTVNDGKPFDENPTAQSLLEE-----GIKVVCGSHPLELLDEDFCYMIKN 79 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTC--EEEEEESSCGGGCHHHHHHHHT-----TCEEEESCCCGGGGGSCEEEEEEC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC--EEEEEeCCcccCChHHHHHHhC-----CCEEEECCChHHhhcCCCCEEEEC
Confidence 456899999999999999988988887 9999999653211122344432 22455444454 3466 9999999
Q ss_pred ccccc
Q psy12825 253 AGVRS 257 (488)
Q Consensus 253 ag~~~ 257 (488)
.+++.
T Consensus 80 pgi~~ 84 (451)
T 3lk7_A 80 PGIPY 84 (451)
T ss_dssp TTSCT
T ss_pred CcCCC
Confidence 88764
No 430
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=94.16 E-value=0.51 Score=44.97 Aligned_cols=112 Identities=14% Similarity=0.129 Sum_probs=68.3
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEE-eCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLI-DSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~-Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
+.++|.|+|| |.+|.+++..|+..|. +|++. +.+++.++....++.... .++. ...|. +
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~--~vv~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 75 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGY--NIVINYARSKKAALETAEEIEKLG-----VKVLVVKANVGQPAKIKEMFQQ 75 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHHHHH
Confidence 3467888898 9999999999999987 78885 888888877777775421 1222 22232 1
Q ss_pred ---ccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+..-|++|..+|...... .+. ...+.-|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS 141 (258)
T 3oid_A 76 IDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISS 141 (258)
T ss_dssp HHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEE
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECc
Confidence 1235699999998643211 121 223444543 3455555555443 456666653
No 431
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=94.15 E-value=0.3 Score=47.11 Aligned_cols=114 Identities=13% Similarity=0.096 Sum_probs=66.8
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhH-HHHHHHHHhhcCCCCCCCcEEEcCCc---c---------
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDR-CKGEMLDLQHGAPFLRSPKIESGSDI---A--------- 241 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~-l~g~~~dL~~~~~~~~~~~v~~ttd~---e--------- 241 (488)
+.++|.|+|| |.+|..++..|+..|. +|++.|++.+. ++....++.... ....+ ...|. +
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~-~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKNG---SDAAC-VKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT---CCEEE-EECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHHhC---CCeEE-EEcCCCCHHHHHHHHHHH
Confidence 4567888898 9999999999999987 89999997643 343444454321 11111 12231 1
Q ss_pred --ccCCCcEEEEecccccCCC---cc---hHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k~G---~~---r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TN 295 (488)
.+...|++|..+|...... .+ -...+..|+.-...+.+.+.++ ...+.||+++-
T Consensus 102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 1347899999998653211 11 2234555655444444444433 23456777653
No 432
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.14 E-value=0.008 Score=60.21 Aligned_cols=32 Identities=28% Similarity=0.555 Sum_probs=30.4
Q ss_pred CcEEEEecchhHHHHHHHHHhhhhHHHHHHHH
Q psy12825 131 QKITVVGAGQVGMACTYSILTQTMARDAVSTV 162 (488)
Q Consensus 131 ~ki~vvg~g~vg~~~a~~~~~k~la~eivlid 162 (488)
.||+|||+|.||.++|+.+..+++++|++++|
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~D 38 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLID 38 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 59999999999999999999999999999988
No 433
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=94.13 E-value=0.088 Score=54.45 Aligned_cols=96 Identities=13% Similarity=0.155 Sum_probs=60.1
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEe
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIIT 252 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIit 252 (488)
....++|+|||.|.||..++..+...|. +|+.+|++....+ ...++. +....++ +.++.||+|+++
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~G~--~V~~~d~~~~~~~-~~~~~G----------~~~~~~l~ell~~aDvV~l~ 254 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPFDV--HLHYTDRHRLPES-VEKELN----------LTWHATREDMYPVCDVVTLN 254 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTC--EEEEECSSCCCHH-HHHHHT----------CEECSSHHHHGGGCSEEEEC
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCC--EEEEEcCCccchh-hHhhcC----------ceecCCHHHHHhcCCEEEEe
Confidence 4577899999999999999998866565 8999998754332 111111 1122345 458899999999
Q ss_pred cccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 253 AGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 253 ag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.... + .++ .++ | ...+....|.+++|+++.
T Consensus 255 ~Plt--~-~t~-~li--~-------~~~l~~mk~gailIN~aR 284 (393)
T 2nac_A 255 CPLH--P-ETE-HMI--N-------DETLKLFKRGAYIVNTAR 284 (393)
T ss_dssp SCCC--T-TTT-TCB--S-------HHHHTTSCTTEEEEECSC
T ss_pred cCCc--h-HHH-HHh--h-------HHHHhhCCCCCEEEECCC
Confidence 6321 1 111 111 1 122344467888888873
No 434
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=94.13 E-value=0.21 Score=46.84 Aligned_cols=74 Identities=14% Similarity=0.249 Sum_probs=52.4
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCC-hhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc----ccC
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSN-EDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA----MSE 244 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~-~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e----al~ 244 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++ ++.++....++.... .++. ...| .+ .++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~ 77 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGA--KVGLHGRKAPANIDETIASMRADG-----GDAAFFAADLATSEACQQLVD 77 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCCTTHHHHHHHHHHTT-----CEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEECCCchhhHHHHHHHHHhcC-----CceEEEECCCCCHHHHHHHHH
Confidence 34578999998 9999999999999887 89999998 777766666664321 1221 1223 21 232
Q ss_pred -------CCcEEEEeccc
Q psy12825 245 -------GSRIVIITAGV 255 (488)
Q Consensus 245 -------dADiVIitag~ 255 (488)
+.|+||.+++.
T Consensus 78 ~~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 78 EFVAKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHHHHSSCSEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 79999999986
No 435
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.13 E-value=0.034 Score=50.26 Aligned_cols=33 Identities=21% Similarity=0.492 Sum_probs=29.9
Q ss_pred ceEEEEecccchHHHHHHHHHcCCCCeEEEEeCCh
Q psy12825 178 QKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNE 212 (488)
Q Consensus 178 ~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~ 212 (488)
..|+|||||..|.+.|..|+..|+ +++|+|..+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~--~V~v~Ek~~ 35 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGH--QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCC
Confidence 469999999999999999999998 899999754
No 436
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.12 E-value=0.046 Score=57.77 Aligned_cols=70 Identities=13% Similarity=0.115 Sum_probs=48.8
Q ss_pred CCCceEEEEecccchHHHHHHHHHc-CCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcE-EE-cCCc----cccCCCc
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQ-GIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKI-ES-GSDI----AMSEGSR 247 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~-~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v-~~-ttd~----eal~dAD 247 (488)
.++++|.|+|||.+|..++..|+.. +. +|+++|++.++++..+.. .. ... .. ..|+ +.++++|
T Consensus 21 l~~k~VlIiGAGgiG~aia~~L~~~~g~--~V~v~~R~~~ka~~la~~-~~-------~~~~~~D~~d~~~l~~~l~~~D 90 (467)
T 2axq_A 21 HMGKNVLLLGSGFVAQPVIDTLAANDDI--NVTVACRTLANAQALAKP-SG-------SKAISLDVTDDSALDKVLADND 90 (467)
T ss_dssp --CEEEEEECCSTTHHHHHHHHHTSTTE--EEEEEESSHHHHHHHHGG-GT-------CEEEECCTTCHHHHHHHHHTSS
T ss_pred CCCCEEEEECChHHHHHHHHHHHhCCCC--eEEEEECCHHHHHHHHHh-cC-------CcEEEEecCCHHHHHHHHcCCC
Confidence 3567899999999999999999887 44 899999998877654322 11 111 11 1222 3567999
Q ss_pred EEEEecc
Q psy12825 248 IVIITAG 254 (488)
Q Consensus 248 iVIitag 254 (488)
+||.+++
T Consensus 91 vVIn~tp 97 (467)
T 2axq_A 91 VVISLIP 97 (467)
T ss_dssp EEEECSC
T ss_pred EEEECCc
Confidence 9999975
No 437
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=94.09 E-value=0.14 Score=49.17 Aligned_cols=114 Identities=12% Similarity=0.088 Sum_probs=68.0
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc----cc---
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA----MS--- 243 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e----al--- 243 (488)
++.++|.|+|+ |.+|..++..|+..|. +|+++|++.+.++.....+.... ....+ ...| .+ .+
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~-~~~Dl~~~~~~~~~~~~~ 105 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGA--DVAIWYNSHPADEKAEHLQKTYG---VHSKA-YKCNISDPKSVEETISQQ 105 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTC--EEEEEESSSCCHHHHHHHHHHHC---SCEEE-EECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---CcceE-EEeecCCHHHHHHHHHHH
Confidence 44568999998 9999999999999886 89999998776655444443321 01111 1223 21 12
Q ss_pred ----CCCcEEEEecccccC--C---Ccch---HhhHhhhHHH----HHHHHHHHhccCCCcEEEEEeC
Q psy12825 244 ----EGSRIVIITAGVRSL--V---GETR---LQLVDRNVKI----FKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 244 ----~dADiVIitag~~~k--~---G~~r---~dll~~N~~i----i~ei~~~I~~~~p~a~vIv~TN 295 (488)
...|+||..++.... + ..+. ...+..|+.- .+.+.+.+.+.. .+.+|+++-
T Consensus 106 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS 172 (279)
T 3ctm_A 106 EKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSS 172 (279)
T ss_dssp HHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred HHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECc
Confidence 348999999986432 1 1111 2234445443 556666666543 345666653
No 438
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=94.08 E-value=0.066 Score=52.11 Aligned_cols=102 Identities=16% Similarity=0.173 Sum_probs=52.3
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccC--CCcEEEEe
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSE--GSRIVIIT 252 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~--dADiVIit 252 (488)
.++|.|+|| |.+|.+++..|+..|. +|+++|++.+. .+ .. ...+.-..+. ++++ ++|+||.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~-~~----~~-------~~Dl~d~~~~~~~~~~~~~d~vih~ 67 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW--HAVGCGFRRAR-PK----FE-------QVNLLDSNAVHHIIHDFQPHVIVHC 67 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEC------------------------------CHHHHHHHCCSEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC--eEEEEccCCCC-CC----eE-------EecCCCHHHHHHHHHhhCCCEEEEC
Confidence 368999999 9999999999998885 89999976542 00 00 0111111122 2455 48999999
Q ss_pred cccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 253 AGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 253 ag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
++..... .....+.+..|+.-...+.+.+.+... .+|++|
T Consensus 68 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S 109 (315)
T 2ydy_A 68 AAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA--FLIYIS 109 (315)
T ss_dssp C-------------------CHHHHHHHHHHHHHTC--EEEEEE
T ss_pred CcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence 8754321 122344556677777777777776543 455555
No 439
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.08 E-value=0.13 Score=47.92 Aligned_cols=42 Identities=10% Similarity=0.219 Sum_probs=34.3
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHH
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKG 217 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g 217 (488)
+.++|.|+|+ |.+|..++..|+..|...+|+++|++.+.++.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~ 44 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE 44 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH
Confidence 4578999998 99999999999988821289999998876653
No 440
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=94.06 E-value=0.3 Score=47.01 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=66.6
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc---------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA--------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e--------- 241 (488)
++.++|.|+|+ |.+|..++..|+..|. +|+++|++++.++....++... .. ...| .+
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-------~~-~~~Dv~d~~~v~~~~~~~ 76 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGA--RVVICDKDESGGRALEQELPGA-------VF-ILCDVTQEDDVKTLVSET 76 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCTTE-------EE-EECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcCC-------eE-EEcCCCCHHHHHHHHHHH
Confidence 45678999998 9999999999999986 8999999988776554443211 11 1122 21
Q ss_pred --ccCCCcEEEEecccccCCC----cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSLVG----ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k~G----~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|.....+ .+. ...+..|+. +.+...+.+.+. .+.+|+++-
T Consensus 77 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS 141 (270)
T 1yde_A 77 IRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISS 141 (270)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcC
Confidence 1237899999998643211 111 233444543 334444444333 355676653
No 441
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=94.06 E-value=0.21 Score=47.23 Aligned_cols=106 Identities=15% Similarity=0.125 Sum_probs=63.9
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc-----------c
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA-----------M 242 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e-----------a 242 (488)
++|.|+|+ |.+|.+++..|+..|. +|+++|++++.++....++.+. .. ...| .+ .
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-------~~-~~~Dv~~~~~v~~~~~~~~~~ 72 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGD--KVCFIDIDEKRSADFAKERPNL-------FY-FHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHTTCTTE-------EE-EECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhcccC-------Ce-EEeeCCCHHHHHHHHHHHHHH
Confidence 57889998 9999999999999987 8999999987766543332211 11 1122 21 1
Q ss_pred cCCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 243 SEGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 243 l~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+...|++|..+|..... ..+. ...+..|+. +.+...+.+.+. .+.||+++-
T Consensus 73 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS 133 (247)
T 3dii_A 73 LQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIAS 133 (247)
T ss_dssp HSCCCEEEECCC-CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEcc
Confidence 34789999999864321 1111 223444443 344445555443 456777753
No 442
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=94.04 E-value=0.092 Score=52.84 Aligned_cols=108 Identities=16% Similarity=0.137 Sum_probs=69.0
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcC-CCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---c----cccC
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQG-IYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---I----AMSE 244 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~-l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~----eal~ 244 (488)
+++++|.|+|| |.+|..++..|+..+ . +|+++|++.+.... .+. ...++. ...| . +.++
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~---~l~------~~~~v~~~~~Dl~d~~~l~~~~~ 98 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVN--QVHVVDNLLSAEKI---NVP------DHPAVRFSETSITDDALLASLQD 98 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCS--EEEEECCCTTCCGG---GSC------CCTTEEEECSCTTCHHHHHHCCS
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCc--eEEEEECCCCCchh---hcc------CCCceEEEECCCCCHHHHHHHhh
Confidence 45679999998 999999999999988 5 89999986542210 010 011222 1223 2 3578
Q ss_pred CCcEEEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEe
Q psy12825 245 GSRIVIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKG-SPDCILLIIS 294 (488)
Q Consensus 245 dADiVIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~T 294 (488)
++|+||.+++..... .....+.+..|+.....+.+.+.+. ... .+|++|
T Consensus 99 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~~V~~S 150 (377)
T 2q1s_A 99 EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLK-KVVYSA 150 (377)
T ss_dssp CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCC-EEEEEE
T ss_pred CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEeC
Confidence 999999998743211 0123455677888888888888775 333 355554
No 443
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.98 E-value=0.17 Score=50.16 Aligned_cols=90 Identities=18% Similarity=0.228 Sum_probs=56.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCCh----hHHHHHHHHHhhcCCCCCCCcEEEc--CCc----ccc
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNE----DRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMS 243 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~----e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal 243 (488)
|.++||.|+|| |.+|..++..|+..+. +|++++++. ++++ ....+... ...+... +|. +++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~-~~~~l~~~-----~v~~~~~Dl~d~~~l~~~~ 79 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHR--PTYILARPGPRSPSKAK-IFKALEDK-----GAIIVYGLINEQEAMEKIL 79 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTC--CEEEEECSSCCCHHHHH-HHHHHHHT-----TCEEEECCTTCHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC--CEEEEECCCCCChhHHH-HHHHHHhC-----CcEEEEeecCCHHHHHHHH
Confidence 45679999999 9999999999998885 899999865 3333 12233221 1223221 122 357
Q ss_pred C--CCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccC
Q psy12825 244 E--GSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGS 285 (488)
Q Consensus 244 ~--dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~ 285 (488)
+ ++|+||.+++.. |+..-+.+++.+.+..
T Consensus 80 ~~~~~d~Vi~~a~~~-------------n~~~~~~l~~aa~~~g 110 (346)
T 3i6i_A 80 KEHEIDIVVSTVGGE-------------SILDQIALVKAMKAVG 110 (346)
T ss_dssp HHTTCCEEEECCCGG-------------GGGGHHHHHHHHHHHC
T ss_pred hhCCCCEEEECCchh-------------hHHHHHHHHHHHHHcC
Confidence 7 999999998642 3333455555655554
No 444
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=93.97 E-value=0.15 Score=54.65 Aligned_cols=87 Identities=16% Similarity=0.174 Sum_probs=58.1
Q ss_pred hhhHHHHHHHHHHHH-hhhCC----CCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcC
Q psy12825 152 QTMARDAVSTVDRLL-SQVAP----SIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGA 226 (488)
Q Consensus 152 k~la~eivlid~~~~-~e~~~----~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~ 226 (488)
-.+++.+...+.... ++... ......++|+|||.|.||..+|..+...|. +|+.||++..... +.++.
T Consensus 112 l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~~g--- 184 (529)
T 1ygy_A 112 LAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGA--YVVAYDPYVSPAR--AAQLG--- 184 (529)
T ss_dssp HHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTTTC--EEEEECTTSCHHH--HHHHT---
T ss_pred HHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHhCCC--EEEEECCCCChhH--HHhcC---
Confidence 467777777765432 22210 034567899999999999999998877676 8999999764221 22221
Q ss_pred CCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 227 PFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 227 ~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
+... ++ +.+++||+|+++.
T Consensus 185 -------~~~~-~l~e~~~~aDvV~l~~ 204 (529)
T 1ygy_A 185 -------IELL-SLDDLLARADFISVHL 204 (529)
T ss_dssp -------CEEC-CHHHHHHHCSEEEECC
T ss_pred -------cEEc-CHHHHHhcCCEEEECC
Confidence 1122 55 5688999999996
No 445
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=93.97 E-value=0.46 Score=44.84 Aligned_cols=112 Identities=18% Similarity=0.268 Sum_probs=64.9
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCe-EEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc----c------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSN-FCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI----A------ 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~e-l~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~----e------ 241 (488)
++.++|.|+|+ |.+|..++..|+..|. + |+++|++++. ....++.+.. . ..++. ...|. +
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~--~~v~~~~r~~~~--~~~~~l~~~~--~-~~~~~~~~~D~~~~~~~~~~~~ 75 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNL--KNFVILDRVENP--TALAELKAIN--P-KVNITFHTYDVTVPVAESKKLL 75 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCC--SEEEEEESSCCH--HHHHHHHHHC--T-TSEEEEEECCTTSCHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC--cEEEEEecCchH--HHHHHHHHhC--C-CceEEEEEEecCCChHHHHHHH
Confidence 45678999998 9999999999999886 5 8999997632 1223333321 0 11221 12232 1
Q ss_pred -----ccCCCcEEEEecccccCCCcchHhhHhhhHH----HHHHHHHHHhccC--CCcEEEEEeC
Q psy12825 242 -----MSEGSRIVIITAGVRSLVGETRLQLVDRNVK----IFKDLIPKIAKGS--PDCILLIISN 295 (488)
Q Consensus 242 -----al~dADiVIitag~~~k~G~~r~dll~~N~~----ii~ei~~~I~~~~--p~a~vIv~TN 295 (488)
.+.+.|+||.++|.... ......+..|+. +.+.+.+.+.+.. +.+.+|+++-
T Consensus 76 ~~~~~~~g~id~lv~~Ag~~~~--~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS 138 (254)
T 1sby_A 76 KKIFDQLKTVDILINGAGILDD--HQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS 138 (254)
T ss_dssp HHHHHHHSCCCEEEECCCCCCT--TCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred HHHHHhcCCCCEEEECCccCCH--HHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECc
Confidence 12378999999986421 223334455544 3444445454432 2466777764
No 446
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=93.96 E-value=0.067 Score=52.81 Aligned_cols=108 Identities=16% Similarity=0.139 Sum_probs=65.7
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---c----cccC
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---I----AMSE 244 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~----eal~ 244 (488)
..++++|.|+|| |.+|..++..|+..|. +|+++|++...... .+.+ . .++. ...| . +.++
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~---~l~~---~---~~~~~~~~Dl~d~~~~~~~~~ 86 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGD--KVVGIDNFATGRRE---HLKD---H---PNLTFVEGSIADHALVNQLIG 86 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCGG---GSCC---C---TTEEEEECCTTCHHHHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEECCCccchh---hHhh---c---CCceEEEEeCCCHHHHHHHHh
Confidence 345789999998 9999999999999885 89999986432110 0110 0 1221 1223 2 2456
Q ss_pred C--CcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 245 G--SRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 245 d--ADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+ +|+||.+++..........+ +..|+.-...+.+.+.+.... .+|++|
T Consensus 87 ~~~~D~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~-~iV~~S 136 (333)
T 2q1w_A 87 DLQPDAVVHTAASYKDPDDWYND-TLTNCVGGSNVVQAAKKNNVG-RFVYFQ 136 (333)
T ss_dssp HHCCSEEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHTTCS-EEEEEE
T ss_pred ccCCcEEEECceecCCCccCChH-HHHHHHHHHHHHHHHHHhCCC-EEEEEC
Confidence 6 99999998754322112222 666777777777777765433 455554
No 447
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=93.94 E-value=0.081 Score=57.58 Aligned_cols=75 Identities=15% Similarity=0.288 Sum_probs=53.7
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCCh-------------------hHHHHHHHHHhhcCCCCCCCcEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNE-------------------DRCKGEMLDLQHGAPFLRSPKIE 235 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~-------------------e~l~g~~~dL~~~~~~~~~~~v~ 235 (488)
.+..||.|||+|.+|+.++..|+..|+ .+|.|+|.+. .+++..+..+.... +..++.
T Consensus 324 L~~arVLIVGaGGLGs~vA~~La~aGV-G~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN---P~V~v~ 399 (615)
T 4gsl_A 324 IKNTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF---PLMDAT 399 (615)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC---TTCEEE
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC---CCcEEE
Confidence 456799999999999999999999997 5899999754 35565666666542 233444
Q ss_pred EcC------------------C---c-cccCCCcEEEEec
Q psy12825 236 SGS------------------D---I-AMSEGSRIVIITA 253 (488)
Q Consensus 236 ~tt------------------d---~-eal~dADiVIita 253 (488)
... + . +.++++|+||.+.
T Consensus 400 ~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~t 439 (615)
T 4gsl_A 400 GVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLV 439 (615)
T ss_dssp EECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECC
T ss_pred EeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecC
Confidence 321 1 1 2367899999885
No 448
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=93.93 E-value=0.28 Score=46.47 Aligned_cols=79 Identities=18% Similarity=0.257 Sum_probs=50.1
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCC-CCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc----c
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGI-YSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA----M 242 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l-~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e----a 242 (488)
...++++|.|+|| |.+|..++..|+..+. ..+|+++|++.+.++. ..++.... .++. ...| .+ .
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~~~l~~~~-----~~~~~~~~Dl~~~~~v~~~ 90 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNH-----SNIHILEIDLRNFDAYDKL 90 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHHC-----TTEEEEECCTTCGGGHHHH
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-HHHhhccC-----CceEEEEecCCChHHHHHH
Confidence 3445678999998 9999999999998871 1289999998765543 23443221 1121 1122 21 1
Q ss_pred cC---------CCcEEEEeccccc
Q psy12825 243 SE---------GSRIVIITAGVRS 257 (488)
Q Consensus 243 l~---------dADiVIitag~~~ 257 (488)
++ ..|+||.++|...
T Consensus 91 ~~~~~~~~g~~~id~li~~Ag~~~ 114 (267)
T 1sny_A 91 VADIEGVTKDQGLNVLFNNAGIAP 114 (267)
T ss_dssp HHHHHHHHGGGCCSEEEECCCCCC
T ss_pred HHHHHHhcCCCCccEEEECCCcCC
Confidence 22 6999999998654
No 449
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=93.92 E-value=0.39 Score=46.35 Aligned_cols=112 Identities=13% Similarity=0.181 Sum_probs=67.8
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
++.+++.|+|| |.+|..++..|+..|. +|++.|.+ +.++....++.... .++. ...|. +
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~-~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 100 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGA--HVLAWGRT-DGVKEVADEIADGG-----GSAEAVVADLADLEGAANVAEE 100 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESS-THHHHHHHHHHTTT-----CEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCH-HHHHHHHHHHHhcC-----CcEEEEEecCCCHHHHHHHHHH
Confidence 45678999998 9999999999999987 89999955 44555555554321 1221 12232 1
Q ss_pred --ccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 --MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 --al~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|...... .+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 101 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS 165 (273)
T 3uf0_A 101 LAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIAS 165 (273)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred HHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcc
Confidence 1237899999998653211 121 223444543 4455555555443 455777653
No 450
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=93.92 E-value=0.063 Score=53.99 Aligned_cols=72 Identities=13% Similarity=0.168 Sum_probs=44.3
Q ss_pred CCCCCceEEEEecccchHHHHHHHHH-----cCC-CCe-EEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-c-
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILT-----QGI-YSN-FCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-S- 243 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~-----~~l-~~e-l~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l- 243 (488)
+.|++.||+|||+|.+|..-+..+.. ... ..+ +.++|+++++++..+.++.- . ...+|+++ |
T Consensus 21 ~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~-------~--~~y~d~~ell~ 91 (393)
T 4fb5_A 21 QSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGF-------E--KATADWRALIA 91 (393)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTC-------S--EEESCHHHHHH
T ss_pred cCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCC-------C--eecCCHHHHhc
Confidence 56788899999999999865544321 111 113 56889999988876555421 1 23568754 3
Q ss_pred -CCCcEEEEec
Q psy12825 244 -EGSRIVIITA 253 (488)
Q Consensus 244 -~dADiVIita 253 (488)
.+.|+|+++.
T Consensus 92 ~~~iDaV~Iat 102 (393)
T 4fb5_A 92 DPEVDVVSVTT 102 (393)
T ss_dssp CTTCCEEEECS
T ss_pred CCCCcEEEECC
Confidence 4789999985
No 451
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=93.89 E-value=0.32 Score=46.95 Aligned_cols=48 Identities=15% Similarity=0.265 Sum_probs=40.1
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhh
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQH 224 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~ 224 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|++++.++....++..
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~ 74 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGA--HVVVTARSKETLQKVVSHCLE 74 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHH
Confidence 45678999999 9999999999999986 899999999888766655543
No 452
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=93.86 E-value=0.092 Score=54.70 Aligned_cols=75 Identities=9% Similarity=0.074 Sum_probs=49.1
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeE-EEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcC----Cccc-cC--C
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNF-CLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS----DIAM-SE--G 245 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el-~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~tt----d~ea-l~--d 245 (488)
.++++||+|||+|.+|...+..+...+-. +| .++|+++++++..+..+.... + ......+ |+++ ++ +
T Consensus 17 ~~~~~rvgiIG~G~~g~~h~~~l~~~~~~-~lvav~d~~~~~~~~~a~~~~~~g-~---~~~~~~~~~~~~~~~ll~~~~ 91 (444)
T 2ixa_A 17 NPKKVRIAFIAVGLRGQTHVENMARRDDV-EIVAFADPDPYMVGRAQEILKKNG-K---KPAKVFGNGNDDYKNMLKDKN 91 (444)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSCHHHHHHHHHHHHHTT-C---CCCEEECSSTTTHHHHTTCTT
T ss_pred CCCCceEEEEecCHHHHHHHHHHHhCCCc-EEEEEEeCCHHHHHHHHHHHHhcC-C---CCCceeccCCCCHHHHhcCCC
Confidence 35678999999999999877777654322 44 689999998876655553210 1 1122234 7754 54 6
Q ss_pred CcEEEEec
Q psy12825 246 SRIVIITA 253 (488)
Q Consensus 246 ADiVIita 253 (488)
.|+|+++.
T Consensus 92 vD~V~i~t 99 (444)
T 2ixa_A 92 IDAVFVSS 99 (444)
T ss_dssp CCEEEECC
T ss_pred CCEEEEcC
Confidence 89999985
No 453
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=93.86 E-value=0.19 Score=47.36 Aligned_cols=109 Identities=17% Similarity=0.160 Sum_probs=65.4
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc-------cc
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA-------MS 243 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e-------al 243 (488)
++.++|.|+|| |.+|..++..|+..|. +|+++|+++++++... ++.+ ... ...| .+ .+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~-~~~~-------~~~-~~~D~~~~~~~~~~~~~~ 72 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGA--KVIATDINESKLQELE-KYPG-------IQT-RVLDVTKKKQIDQFANEV 72 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHGGGG-GSTT-------EEE-EECCTTCHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHH-hccC-------ceE-EEeeCCCHHHHHHHHHHh
Confidence 45578899998 9999999999999986 8999999887654322 2110 111 1122 21 25
Q ss_pred CCCcEEEEecccccCC---Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 244 EGSRIVIITAGVRSLV---GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 244 ~dADiVIitag~~~k~---G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
...|++|..+|..... ..+. ...+..|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 73 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS 133 (246)
T 2ag5_A 73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSS 133 (246)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEec
Confidence 6789999999864321 1111 223444443 3444455454433 456777654
No 454
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=93.83 E-value=0.079 Score=52.26 Aligned_cols=114 Identities=17% Similarity=0.113 Sum_probs=67.2
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE-cCCc-------cccCC
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES-GSDI-------AMSEG 245 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~-ttd~-------eal~d 245 (488)
++++||.|+|| |.+|..++..|+..|...+|+.+|...... ....+.... ...++.. ..|+ +++++
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~--~~~~l~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~ 96 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG--NLNNVKSIQ---DHPNYYFVKGEIQNGELLEHVIKE 96 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC--CGGGGTTTT---TCTTEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc--chhhhhhhc---cCCCeEEEEcCCCCHHHHHHHHhh
Confidence 45689999999 999999999999988444788888743111 111122211 1122221 2332 24555
Q ss_pred --CcEEEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 246 --SRIVIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 246 --ADiVIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+|+||.+++..... .....+.+..|+.-...+.+.+.+..... +|++|
T Consensus 97 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~v~~S 148 (346)
T 4egb_A 97 RDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIK-LVQVS 148 (346)
T ss_dssp HTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSE-EEEEE
T ss_pred cCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCE-EEEeC
Confidence 99999998754321 12334556778888888888888775443 44444
No 455
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=93.82 E-value=0.18 Score=48.95 Aligned_cols=111 Identities=13% Similarity=0.166 Sum_probs=69.5
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEE-EcCC---cc-------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSD---IA------- 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e------- 241 (488)
.++.++|.|+|| |.+|..++..|+..|. +|++.|+++++++....++. .++. ...| ++
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~Dl~d~~~v~~~~~ 82 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGA--TVIMAVRDTRKGEAAARTMA--------GQVEVRELDLQDLSSVRRFAD 82 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHTTSS--------SEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhc--------CCeeEEEcCCCCHHHHHHHHH
Confidence 345678999998 9999999999999986 89999999887765443331 1222 1123 21
Q ss_pred ccCCCcEEEEecccccCCC-c---chHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 MSEGSRIVIITAGVRSLVG-E---TRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 al~dADiVIitag~~~k~G-~---~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|...... . .-...+..|+.-...+.+.+...-.. .||+++-
T Consensus 83 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-riv~isS 139 (291)
T 3rd5_A 83 GVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-RVVTVSS 139 (291)
T ss_dssp TCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-EEEEECC
T ss_pred hcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-heeEeec
Confidence 2346799999998753221 1 12334566666555556655554322 3555543
No 456
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=93.79 E-value=0.064 Score=55.84 Aligned_cols=75 Identities=16% Similarity=0.104 Sum_probs=49.1
Q ss_pred CCCCCceEEEEecccchH-HHHHHHHHcCCCCe-EEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-cC--CCc
Q psy12825 173 IESPDQKITVVGAGQVGM-ACTYSILTQGIYSN-FCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-SE--GSR 247 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~-~ia~~La~~~l~~e-l~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l~--dAD 247 (488)
..++++||+|||+|.+|. .++..+...+-. + +.++|.++++++....... . ....+...+|+++ ++ ++|
T Consensus 79 ~~~~~irigiIG~G~~g~~~~~~~l~~~~~~-~lvav~d~~~~~~~~~a~~~g----~-~~~~~~~~~~~~~ll~~~~vD 152 (433)
T 1h6d_A 79 PEDRRFGYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYG----V-DPRKIYDYSNFDKIAKDPKID 152 (433)
T ss_dssp CCCCCEEEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTT----C-CGGGEECSSSGGGGGGCTTCC
T ss_pred CCCCceEEEEECCcHHHHHHHHHHHhhCCCc-EEEEEEcCCHHHHHHHHHHhC----C-CcccccccCCHHHHhcCCCCC
Confidence 456678999999999997 677766543322 4 4689999987765433321 0 0112444567755 44 799
Q ss_pred EEEEec
Q psy12825 248 IVIITA 253 (488)
Q Consensus 248 iVIita 253 (488)
+|+++.
T Consensus 153 ~V~iat 158 (433)
T 1h6d_A 153 AVYIIL 158 (433)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 999985
No 457
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=93.79 E-value=0.16 Score=50.07 Aligned_cols=113 Identities=20% Similarity=0.191 Sum_probs=66.9
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhH------HHHHHHHHhhcCCCCCCCcEEEc--CCc----ccc
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDR------CKGEMLDLQHGAPFLRSPKIESG--SDI----AMS 243 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~------l~g~~~dL~~~~~~~~~~~v~~t--td~----eal 243 (488)
+++|.|+|| |.+|++++..|+..|. +|+++|++... ......++.... .....+... +|. +.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~ 77 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY--LPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLF 77 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC--CEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecCCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHHHHHHHH
Confidence 368999998 9999999999999886 89999874321 111122232210 011122221 122 234
Q ss_pred C--CCcEEEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 244 E--GSRIVIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 244 ~--dADiVIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+ ++|+||.+++..... .....+.+..|+.-...+.+.+.+.... .+|++|
T Consensus 78 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~S 131 (348)
T 1ek6_A 78 KKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVK-NLVFSS 131 (348)
T ss_dssp HHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred HhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCC-EEEEEC
Confidence 5 799999998753211 0123455677888778888887765443 355554
No 458
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=93.79 E-value=0.26 Score=50.99 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=70.6
Q ss_pred hhHHHHHHHHHHH-HhhhCC----CCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC
Q psy12825 153 TMARDAVSTVDRL-LSQVAP----SIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP 227 (488)
Q Consensus 153 ~la~eivlid~~~-~~e~~~----~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~ 227 (488)
.+++.+...+... .++... ......++|+|||.|.||..+|..+..-|. +|+.||++.... .
T Consensus 116 ~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~----------~- 182 (404)
T 1sc6_A 116 LLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESLGM--YVYFYDIENKLP----------L- 182 (404)
T ss_dssp HHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCCC----------C-
T ss_pred HHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHCCC--EEEEEcCCchhc----------c-
Confidence 4667776666442 222211 134578899999999999999998876666 899999865310 0
Q ss_pred CCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe--CCch
Q psy12825 228 FLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS--NPVD 298 (488)
Q Consensus 228 ~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T--NPvd 298 (488)
..+....++ +.++.||+|++..... + .++ .++ | . +.+....|.+++|+++ .++|
T Consensus 183 ----~~~~~~~~l~ell~~aDvV~l~~P~t--~-~t~-~li--~----~---~~l~~mk~ga~lIN~aRg~~vd 239 (404)
T 1sc6_A 183 ----GNATQVQHLSDLLNMSDVVSLHVPEN--P-STK-NMM--G----A---KEISLMKPGSLLINASRGTVVD 239 (404)
T ss_dssp ----TTCEECSCHHHHHHHCSEEEECCCSS--T-TTT-TCB--C----H---HHHHHSCTTEEEEECSCSSSBC
T ss_pred ----CCceecCCHHHHHhcCCEEEEccCCC--h-HHH-HHh--h----H---HHHhhcCCCeEEEECCCChHHh
Confidence 112233456 4588999999986321 1 111 111 1 1 2233445788889887 3455
No 459
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=93.78 E-value=0.5 Score=45.05 Aligned_cols=117 Identities=12% Similarity=0.163 Sum_probs=68.4
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEE-EeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCcc--------
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCL-IDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDIA-------- 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L-~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~e-------- 241 (488)
.+..++|.|+|| |.+|..++..|+..|. +|++ .+.+.+.++....++.... ....+... +|.+
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~ 97 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGF--NIGVHYHRDAAGAQETLNAIVANG---GNGRLLSFDVANREQCREVLEH 97 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHH
Confidence 344567889998 9999999999999987 6755 5567777776666665431 11122211 1221
Q ss_pred ---ccCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.+...|++|..+|...... .+ ....+..|+. +.+.....+.+....+.||+++-
T Consensus 98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS 164 (267)
T 4iiu_A 98 EIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSS 164 (267)
T ss_dssp HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred HHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 1237899999998654221 11 2233445543 33444444443445677777764
No 460
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=93.77 E-value=0.044 Score=54.92 Aligned_cols=34 Identities=21% Similarity=0.432 Sum_probs=30.5
Q ss_pred CceEEEEecccchHHHHHHHHHcCCCCeEEEEeCCh
Q psy12825 177 DQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNE 212 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~ 212 (488)
.+||+|||||.+|.++|..|+..|+ +++++|.++
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~--~v~v~Er~~ 34 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI--KVTIYERNS 34 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC--CEEEEecCC
Confidence 3799999999999999999999998 899998743
No 461
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=93.77 E-value=0.7 Score=45.03 Aligned_cols=114 Identities=12% Similarity=0.028 Sum_probs=68.2
Q ss_pred CCCceEEEEec-c--cchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc-------
Q psy12825 175 SPDQKITVVGA-G--QVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G--~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e------- 241 (488)
++.+++.|+|+ | .+|..++..|+..|. +|++.|++++..+.......... ... ....| .+
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~-~~~~Dv~d~~~v~~~~~ 100 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA--EVALTYLSETFKKRVDPLAESLG----VKL-TVPCDVSDAESVDNMFK 100 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHHT----CCE-EEECCTTCHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhcC----CeE-EEEcCCCCHHHHHHHHH
Confidence 34568899998 4 899999999999987 89999998765543322222221 111 12223 21
Q ss_pred ----ccCCCcEEEEecccccC-----C--Ccc---hHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeC
Q psy12825 242 ----MSEGSRIVIITAGVRSL-----V--GET---RLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISN 295 (488)
Q Consensus 242 ----al~dADiVIitag~~~k-----~--G~~---r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TN 295 (488)
.+...|++|.++|.... + ..+ -...+..|+.-...+.+.+..+ ...+.||+++-
T Consensus 101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 12367999999986531 1 112 2234556665555555555544 23567777764
No 462
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=93.76 E-value=0.025 Score=56.47 Aligned_cols=70 Identities=9% Similarity=0.084 Sum_probs=44.7
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-cC--CCcEEEE
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-SE--GSRIVII 251 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l~--dADiVIi 251 (488)
++++||+|||+|.+|..++..+...+...-+.++|+++++++..+.. + ...+ ..+|+++ +. ++|+|++
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~------~-~~~~--~~~~~~~ll~~~~~D~V~i 73 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANK------Y-HLPK--AYDKLEDMLADESIDVIYV 73 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---C------C-CCSC--EESCHHHHHTCTTCCEEEE
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHH------c-CCCc--ccCCHHHHhcCCCCCEEEE
Confidence 46689999999999998888877654322345889988766532211 1 1111 3467753 55 7999999
Q ss_pred ec
Q psy12825 252 TA 253 (488)
Q Consensus 252 ta 253 (488)
+.
T Consensus 74 ~t 75 (329)
T 3evn_A 74 AT 75 (329)
T ss_dssp CS
T ss_pred CC
Confidence 85
No 463
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=93.76 E-value=0.6 Score=45.20 Aligned_cols=114 Identities=12% Similarity=0.090 Sum_probs=69.8
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChh-------HHHHHHHHHhhcCCCCCCCcEE-EcCC---cc-
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNED-------RCKGEMLDLQHGAPFLRSPKIE-SGSD---IA- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e-------~l~g~~~dL~~~~~~~~~~~v~-~ttd---~e- 241 (488)
++.+++.|+|| |.+|..++..|+..|. +|+++|++.+ .++....++.... .++. ...| .+
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~ 79 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA--NVALVAKSAEPHPKLPGTIYTAAKEIEEAG-----GQALPIVGDIRDGDA 79 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHHT-----SEEEEEECCTTSHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECChhhhhhhhHHHHHHHHHHHhcC-----CcEEEEECCCCCHHH
Confidence 35678889998 9999999999999887 8999999876 3555555555431 1221 1122 11
Q ss_pred ----------ccCCCcEEEEecccccCC---Ccch---HhhHhhhHHHHHHHHHHHhcc---CCCcEEEEEeC
Q psy12825 242 ----------MSEGSRIVIITAGVRSLV---GETR---LQLVDRNVKIFKDLIPKIAKG---SPDCILLIISN 295 (488)
Q Consensus 242 ----------al~dADiVIitag~~~k~---G~~r---~dll~~N~~ii~ei~~~I~~~---~p~a~vIv~TN 295 (488)
.+...|++|.++|..... ..+. ...+.-|+.-...+.+.+... ...+.||+++-
T Consensus 80 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS 152 (285)
T 3sc4_A 80 VAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSP 152 (285)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence 123789999999865321 1222 234556665444455544433 23456777764
No 464
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=93.76 E-value=0.11 Score=46.04 Aligned_cols=61 Identities=21% Similarity=0.229 Sum_probs=39.2
Q ss_pred CceEEEEec----ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcccc-CCCcEEEE
Q psy12825 177 DQKITVVGA----GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMS-EGSRIVII 251 (488)
Q Consensus 177 ~~KIaIIGA----G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal-~dADiVIi 251 (488)
+.+|+|||+ |.+|..++..|...|+ +| +++|+... + ..+. -+....+++++ .++|+|++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~--~v--~~vnp~~~-g--~~i~---------G~~~~~sl~el~~~~Dlvii 76 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGY--HV--IPVSPKVA-G--KTLL---------GQQGYATLADVPEKVDMVDV 76 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTC--CE--EEECSSST-T--SEET---------TEECCSSTTTCSSCCSEEEC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCC--EE--EEeCCccc-c--cccC---------CeeccCCHHHcCCCCCEEEE
Confidence 578999999 8899999999988887 54 45444321 0 0010 12223344443 47899999
Q ss_pred ec
Q psy12825 252 TA 253 (488)
Q Consensus 252 ta 253 (488)
+.
T Consensus 77 ~v 78 (145)
T 2duw_A 77 FR 78 (145)
T ss_dssp CS
T ss_pred Ee
Confidence 85
No 465
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=93.74 E-value=0.52 Score=45.89 Aligned_cols=116 Identities=15% Similarity=0.185 Sum_probs=71.6
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCC-CCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEE-cCC---c---------
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGI-YSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIES-GSD---I--------- 240 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l-~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~-ttd---~--------- 240 (488)
+.+++.|+|| |.+|..++..|+..|. ...|++.|++.+.++....++..... ..++.. ..| .
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP---NAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCT---TCEEEEEECCTTCGGGHHHHHHT
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCC---CCeEEEEECCCCCHHHHHHHHHH
Confidence 3568899998 9999999999998764 23899999999988887777765311 112221 122 2
Q ss_pred --cccCCCcEEEEecccccCC----Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 241 --AMSEGSRIVIITAGVRSLV----GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 241 --eal~dADiVIitag~~~k~----G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
+.+...|++|..+|..... ..+. ...+.-|+. +.+.+.+.+.+.. .+.||+++-
T Consensus 109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS 175 (287)
T 3rku_A 109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGS 175 (287)
T ss_dssp SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECC
Confidence 1234689999999864321 1122 233444543 4455555555543 355666653
No 466
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=93.74 E-value=0.35 Score=46.28 Aligned_cols=113 Identities=12% Similarity=0.138 Sum_probs=68.2
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEE-eCChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c--------
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLI-DSNEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A-------- 241 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~-Di~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e-------- 241 (488)
+.++|.|+|| |.+|..++..|+..|. +|++. +.+.+.++....++.... .++. ...|. +
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~ 97 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGW--RVGVNYAANREAADAVVAAITESG-----GEAVAIPGDVGNAADIAAMFSA 97 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT-----CEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCChhHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHHHHH
Confidence 3456777898 9999999999999987 77665 778777776666665431 1222 12232 1
Q ss_pred ---ccCCCcEEEEecccccCCC----cch---HhhHhhhHH----HHHHHHHHHhcc--CCCcEEEEEeC
Q psy12825 242 ---MSEGSRIVIITAGVRSLVG----ETR---LQLVDRNVK----IFKDLIPKIAKG--SPDCILLIISN 295 (488)
Q Consensus 242 ---al~dADiVIitag~~~k~G----~~r---~dll~~N~~----ii~ei~~~I~~~--~p~a~vIv~TN 295 (488)
.+...|+||..+|....++ .+. ...+..|+. +.+.+.+.+.+. ...+.||+++-
T Consensus 98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS 167 (272)
T 4e3z_A 98 VDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSS 167 (272)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred HHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcc
Confidence 1236799999998654321 121 233444433 445555556553 23566777764
No 467
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.74 E-value=0.031 Score=54.20 Aligned_cols=71 Identities=20% Similarity=0.260 Sum_probs=49.2
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCCh-------hHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cc
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNE-------DRCKGEMLDLQHGAPFLRSPKIESG--SDI----AM 242 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~-------e~l~g~~~dL~~~~~~~~~~~v~~t--td~----ea 242 (488)
++||.|+|| |.+|.+++..|+..|. +|+.++++. ++++. ..++.+. ...+... +|. ++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~-~~~l~~~-----~v~~v~~D~~d~~~l~~~ 73 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN--PTYALVRKTITAANPETKEEL-IDNYQSL-----GVILLEGDINDHETLVKA 73 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC--CEEEEECCSCCSSCHHHHHHH-HHHHHHT-----TCEEEECCTTCHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC--cEEEEECCCcccCChHHHHHH-HHHHHhC-----CCEEEEeCCCCHHHHHHH
Confidence 568999999 9999999999998885 789999876 44432 2233221 1222221 122 46
Q ss_pred cCCCcEEEEeccc
Q psy12825 243 SEGSRIVIITAGV 255 (488)
Q Consensus 243 l~dADiVIitag~ 255 (488)
++++|+||.+++.
T Consensus 74 ~~~~d~vi~~a~~ 86 (307)
T 2gas_A 74 IKQVDIVICAAGR 86 (307)
T ss_dssp HTTCSEEEECSSS
T ss_pred HhCCCEEEECCcc
Confidence 8899999999864
No 468
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=93.71 E-value=0.15 Score=48.72 Aligned_cols=94 Identities=18% Similarity=0.193 Sum_probs=62.1
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccC--CCcEEEEec
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSE--GSRIVIITA 253 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~--dADiVIita 253 (488)
|||.|+|| |.+|++++..|+..|. +|+.+++.. .|+.+ ..+. +.++ ++|+||.++
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~-------~D~~d------------~~~~~~~~~~~~~d~vi~~a 64 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEY--DIYPFDKKL-------LDITN------------ISQVQQVVQEIRPHIIIHCA 64 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTE--EEEEECTTT-------SCTTC------------HHHHHHHHHHHCCSEEEECC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC--EEEEecccc-------cCCCC------------HHHHHHHHHhcCCCEEEECC
Confidence 48999998 9999999999988876 899998721 01100 0011 2333 689999998
Q ss_pred ccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 254 GVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 254 g~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+..... .....+.+..|+.-...+.+.+.+... .+|++|
T Consensus 65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~S 105 (287)
T 3sc6_A 65 AYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA--KLVYIS 105 (287)
T ss_dssp CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC--EEEEEE
T ss_pred cccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence 754321 123455667788877888888877654 355554
No 469
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=93.71 E-value=0.2 Score=43.98 Aligned_cols=110 Identities=15% Similarity=0.107 Sum_probs=63.3
Q ss_pred CCceEEEEec----ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccccC-CCcEEE
Q psy12825 176 PDQKITVVGA----GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMSE-GSRIVI 250 (488)
Q Consensus 176 ~~~KIaIIGA----G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal~-dADiVI 250 (488)
++.+|+|||+ |.+|+.++..|...|+ + +|++|+.+... ++ ..+....+.+++. ..|+++
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~--~--v~~vnp~~~~~---~i---------~G~~~~~sl~el~~~vDlav 75 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGY--R--VLPVNPRFQGE---EL---------FGEEAVASLLDLKEPVDILD 75 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTC--E--EEEECGGGTTS---EE---------TTEECBSSGGGCCSCCSEEE
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCC--E--EEEeCCCcccC---cC---------CCEEecCCHHHCCCCCCEEE
Confidence 3568999999 7999999999888887 4 77777753110 11 1122334455543 699999
Q ss_pred EecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeCCchhHHHHHHHhcCCCCCcEEeecCC
Q psy12825 251 ITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISNPVDVLTYISWKLSGFPKNRVIGSGTN 321 (488)
Q Consensus 251 itag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TNPvdi~t~~~~k~sg~p~~rViG~gt~ 321 (488)
++.. .+...++.+++.+....++++..+-...-+.+.+.+ .|+ +++|=.|.
T Consensus 76 i~vp----------------~~~~~~v~~~~~~~gi~~i~~~~g~~~~~~~~~a~~-~Gi---r~vgpnc~ 126 (140)
T 1iuk_A 76 VFRP----------------PSALMDHLPEVLALRPGLVWLQSGIRHPEFEKALKE-AGI---PVVADRCL 126 (140)
T ss_dssp ECSC----------------HHHHTTTHHHHHHHCCSCEEECTTCCCHHHHHHHHH-TTC---CEEESCCH
T ss_pred EEeC----------------HHHHHHHHHHHHHcCCCEEEEcCCcCHHHHHHHHHH-cCC---EEEcCCcc
Confidence 9852 234444454544454455433322333344444443 355 57764343
No 470
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=93.71 E-value=0.03 Score=55.14 Aligned_cols=69 Identities=14% Similarity=0.081 Sum_probs=48.7
Q ss_pred CCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 175 SPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 175 ~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIita 253 (488)
.+.++|.|+|+|.+|.+++..|+..|. .+|.+++++.++++..+ . ........+. +.+.++|+||.+.
T Consensus 115 l~~k~vlvlGaGg~g~aia~~L~~~G~-~~v~v~~R~~~~a~~la----~------~~~~~~~~~~~~~~~~aDiVInaT 183 (277)
T 3don_A 115 IEDAYILILGAGGASKGIANELYKIVR-PTLTVANRTMSRFNNWS----L------NINKINLSHAESHLDEFDIIINTT 183 (277)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHTTCC-SCCEEECSCGGGGTTCC----S------CCEEECHHHHHHTGGGCSEEEECC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC-CEEEEEeCCHHHHHHHH----H------hcccccHhhHHHHhcCCCEEEECc
Confidence 345789999999999999999988774 47999999987654321 1 1122112233 3578999999986
Q ss_pred c
Q psy12825 254 G 254 (488)
Q Consensus 254 g 254 (488)
.
T Consensus 184 p 184 (277)
T 3don_A 184 P 184 (277)
T ss_dssp C
T ss_pred c
Confidence 3
No 471
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=93.71 E-value=0.064 Score=53.70 Aligned_cols=68 Identities=16% Similarity=0.193 Sum_probs=46.5
Q ss_pred CceEEEEecccchHHHHHHHH-HcCCCCeEE-EEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-cC--CCcEEEE
Q psy12825 177 DQKITVVGAGQVGMACTYSIL-TQGIYSNFC-LIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-SE--GSRIVII 251 (488)
Q Consensus 177 ~~KIaIIGAG~vG~~ia~~La-~~~l~~el~-L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l~--dADiVIi 251 (488)
++||+|||+|.+|...+..+. ...-. +|+ ++|+++++++..+..+. . .....+|+++ ++ ++|+|++
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~-~l~av~d~~~~~~~~~~~~~g------~--~~~~~~~~~~ll~~~~~D~V~i 72 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGA-EIVAVTDVNQEAAQKVVEQYQ------L--NATVYPNDDSLLADENVDAVLV 72 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSE-EEEEEECSSHHHHHHHHHHTT------C--CCEEESSHHHHHHCTTCCEEEE
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCc-EEEEEEcCCHHHHHHHHHHhC------C--CCeeeCCHHHHhcCCCCCEEEE
Confidence 369999999999999888887 33222 544 88999987775443331 0 1234567754 43 5999999
Q ss_pred ec
Q psy12825 252 TA 253 (488)
Q Consensus 252 ta 253 (488)
+.
T Consensus 73 ~t 74 (344)
T 3mz0_A 73 TS 74 (344)
T ss_dssp CS
T ss_pred CC
Confidence 85
No 472
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=93.65 E-value=0.075 Score=50.29 Aligned_cols=108 Identities=10% Similarity=0.077 Sum_probs=65.8
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEE-e--CChhHHHHHHHHHhhcCCCCCCCcEEEcCCc--------cccCC
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLI-D--SNEDRCKGEMLDLQHGAPFLRSPKIESGSDI--------AMSEG 245 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~-D--i~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~--------eal~d 245 (488)
+++.|+|+ |.+|..++..|+..|. +|++. | ++++.++....++ .. .++.-..+. +.+..
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~r~~~~~~~~~~~~-~~------~~~~~~~~v~~~~~~~~~~~g~ 72 (244)
T 1zmo_A 2 VIALVTHARHFAGPAAVEALTQDGY--TVVCHDASFADAAERQRFESEN-PG------TIALAEQKPERLVDATLQHGEA 72 (244)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTC--EEEECCGGGGSHHHHHHHHHHS-TT------EEECCCCCGGGHHHHHGGGSSC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCcCCHHHHHHHHHHh-CC------CcccCHHHHHHHHHHHHHHcCC
Confidence 56888898 9999999999999987 89999 6 8888776655544 10 111101111 23457
Q ss_pred CcEEEEecccccC----C--Ccch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeC
Q psy12825 246 SRIVIITAGVRSL----V--GETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 246 ADiVIitag~~~k----~--G~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
.|++|..+|.... + ..+. ...+..|+. +.+.+.+.+.+. ..+.||+++-
T Consensus 73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS 134 (244)
T 1zmo_A 73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVIFITS 134 (244)
T ss_dssp EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECC
Confidence 8999999986532 1 1121 223445543 345555555443 3466777764
No 473
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=93.64 E-value=0.16 Score=49.91 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=66.5
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCCCcEE
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEGSRIV 249 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~dADiV 249 (488)
+++|.|+|| |.+|++++..|+..+...+|+++|++..... ...+.... .....+... +|. ++++++|+|
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~v 79 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEAIL--GDRVELVVGDIADAELVDKLAAKADAI 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGGGC--SSSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCC--hhHHhhhc--cCCeEEEECCCCCHHHHHHHhhcCCEE
Confidence 578999998 9999999999998833338999998542100 00111110 011112111 122 357899999
Q ss_pred EEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 250 IITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 250 Iitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
|.+++..... .....+.+..|+.-...+.+.+.+... .+|++|
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~--~~v~~S 124 (348)
T 1oc2_A 80 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI--RFHHVS 124 (348)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC--EEEEEE
T ss_pred EECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC--eEEEec
Confidence 9998754210 012234566777777777777777643 455554
No 474
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=93.64 E-value=0.54 Score=45.17 Aligned_cols=112 Identities=13% Similarity=0.134 Sum_probs=68.1
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC-ChhHHHHHHHHHhhcCCCCCCCcEE-EcCCc---c-------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-NEDRCKGEMLDLQHGAPFLRSPKIE-SGSDI---A------- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di-~~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~---e------- 241 (488)
++.++|.|+|+ |.+|.+++..|+..|. +|++.|. +.+.++....++.... .++. ...|. +
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~d~~~v~~~~~ 98 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGA--KVAVNYASSAGAADEVVAAIAAAG-----GEAFAVKADVSQESEVEALFA 98 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT-----CCEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHHHH
Confidence 34567888898 9999999999999987 8889888 6666666666665431 1221 22232 1
Q ss_pred ----ccCCCcEEEEecccccCCC---cch---HhhHhhhHH----HHHHHHHHHhccCCCcEEEEEe
Q psy12825 242 ----MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVK----IFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 242 ----al~dADiVIitag~~~k~G---~~r---~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~T 294 (488)
.+...|++|..+|...... .+. ...+.-|+. +.+.+.+.+.+.. .+.||+++
T Consensus 99 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~is 164 (269)
T 4dmm_A 99 AVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIA 164 (269)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEC
Confidence 1237899999998653221 121 223444543 3455555555443 35566665
No 475
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=93.64 E-value=0.11 Score=52.22 Aligned_cols=117 Identities=17% Similarity=0.187 Sum_probs=67.6
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHH----------------HHHHHhhcCCCCCCCcEE
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKG----------------EMLDLQHGAPFLRSPKIE 235 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g----------------~~~dL~~~~~~~~~~~v~ 235 (488)
....+++|.|+|| |.+|++++..|+..|. +|+++|.+...... ...++.... .....+.
T Consensus 7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~v~~~ 82 (404)
T 1i24_A 7 HHHHGSRVMVIGGDGYCGWATALHLSKKNY--EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT--GKSIELY 82 (404)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH--CCCCEEE
T ss_pred cccCCCeEEEeCCCcHHHHHHHHHHHhCCC--eEEEEEecCccccccccccccccccchhhhhhhhHhhcc--CCceEEE
Confidence 3456789999998 9999999999999886 89999986432110 111111110 0112222
Q ss_pred EcCCc-------cccCC--CcEEEEecccccCC--Ccch---HhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 236 SGSDI-------AMSEG--SRIVIITAGVRSLV--GETR---LQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 236 ~ttd~-------eal~d--ADiVIitag~~~k~--G~~r---~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
..|. +.+++ +|+||.+++..... ..+. ...+..|+.-...+.+.+.+......+|++|
T Consensus 83 -~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~S 154 (404)
T 1i24_A 83 -VGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLG 154 (404)
T ss_dssp -ESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred -ECCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 2232 23555 99999998753211 0111 2355678887888888887765433455555
No 476
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=93.64 E-value=0.11 Score=50.94 Aligned_cols=106 Identities=14% Similarity=0.159 Sum_probs=65.1
Q ss_pred ceEEEEec-ccchHHHHHHHHHc-CCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CC----c-cccCCCcE
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQ-GIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SD----I-AMSEGSRI 248 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~-~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td----~-eal~dADi 248 (488)
|||.|+|| |.+|++++..|+.. +. +|+++|++.+.++. +.. .....+... +| . ++++++|+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~----~~~----~~~~~~~~~D~~~~~~~~~~~~~~~d~ 70 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY--EVYGLDIGSDAISR----FLN----HPHFHFVEGDISIHSEWIEYHVKKCDV 70 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC--EEEEEESCCGGGGG----GTT----CTTEEEEECCTTTCSHHHHHHHHHCSE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC--EEEEEeCCcchHHH----hhc----CCCeEEEeccccCcHHHHHhhccCCCE
Confidence 58999999 99999999999987 65 89999997754321 111 011111111 12 1 24568999
Q ss_pred EEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEeC
Q psy12825 249 VIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIISN 295 (488)
Q Consensus 249 VIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~TN 295 (488)
||.+++..... .....+.+..|+.-...+.+.+.+.. ..+|++|-
T Consensus 71 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS 117 (345)
T 2bll_A 71 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPST 117 (345)
T ss_dssp EEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECC
T ss_pred EEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEec
Confidence 99998753211 01233455667666667777776654 44565553
No 477
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=93.60 E-value=0.21 Score=53.35 Aligned_cols=130 Identities=15% Similarity=0.161 Sum_probs=73.4
Q ss_pred CCceEEEEecccchHH-HHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCcccc-CCCcEEEEec
Q psy12825 176 PDQKITVVGAGQVGMA-CTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAMS-EGSRIVIITA 253 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~-ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~eal-~dADiVIita 253 (488)
+.+||.+||.|..|.+ +|..|...|. +|...|.+.... ....|... ...+....+.+.+ .++|+||.+.
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~--~V~~sD~~~~~~--~~~~L~~~-----gi~~~~G~~~~~~~~~~d~vV~Sp 88 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGH--TVTGSDANIYPP--MSTQLEQA-----GVTIEEGYLIAHLQPAPDLVVVGN 88 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCCTT--HHHHHHHT-----TCEEEESCCGGGGCSCCSEEEECT
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCC--EEEEECCCCCcH--HHHHHHHC-----CCEEECCCCHHHcCCCCCEEEECC
Confidence 5789999999999987 6777777887 899999864211 12234332 2345554556666 5799999998
Q ss_pred ccccCCCcchHhhHhhhHHHHHHHHHHHhc-cCCCcEEEEEeCCch------hHHHHHHHhcCCCCCcEEe
Q psy12825 254 GVRSLVGETRLQLVDRNVKIFKDLIPKIAK-GSPDCILLIISNPVD------VLTYISWKLSGFPKNRVIG 317 (488)
Q Consensus 254 g~~~k~G~~r~dll~~N~~ii~ei~~~I~~-~~p~a~vIv~TNPvd------i~t~~~~k~sg~p~~rViG 317 (488)
+++... ........++++++.+. +.+.+ ..++..+|-+|-... ++.+++ +..|+++.-++|
T Consensus 89 gi~~~~-p~l~~a~~~gi~v~~~~-e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL-~~~G~~~~~~iG 156 (524)
T 3hn7_A 89 AMKRGM-DVIEYMLDTGLRYTSGP-QFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWIL-HYAGIDAGFLIG 156 (524)
T ss_dssp TCCTTS-HHHHHHHHHTCCEEEHH-HHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHH-HHTTCCCEEECS
T ss_pred CcCCCC-HHHHHHHHCCCcEEEHH-HHHHHHHhccCcEEEEECCCCHHHHHHHHHHHH-HHcCCCceEEEC
Confidence 776421 11111123444444332 11222 123445677776654 334444 345676543443
No 478
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=93.59 E-value=0.27 Score=47.43 Aligned_cols=102 Identities=16% Similarity=0.203 Sum_probs=63.9
Q ss_pred CceEEEEec-ccchHHHHHHHHHcC-CCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCCCcE
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQG-IYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEGSRI 248 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~-l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~dADi 248 (488)
+++|.|+|| |.+|..++..|+..+ . +|++++++++.... ..+... ...+... +|+ ++++++|.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~--~V~~~~R~~~~~~~--~~l~~~-----~~~~~~~D~~d~~~l~~~~~~~d~ 75 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTF--KVRVVTRNPRKKAA--KELRLQ-----GAEVVQGDQDDQVIMELALNGAYA 75 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSS--EEEEEESCTTSHHH--HHHHHT-----TCEEEECCTTCHHHHHHHHTTCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCc--eEEEEEcCCCCHHH--HHHHHC-----CCEEEEecCCCHHHHHHHHhcCCE
Confidence 478999999 999999999999876 5 89999998765432 223221 1122221 222 36889999
Q ss_pred EEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 249 VIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 249 VIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
||.+++..... ....|+...+.+.+.+.+..... +|+.|
T Consensus 76 vi~~a~~~~~~------~~~~~~~~~~~~~~aa~~~gv~~-iv~~S 114 (299)
T 2wm3_A 76 TFIVTNYWESC------SQEQEVKQGKLLADLARRLGLHY-VVYSG 114 (299)
T ss_dssp EEECCCHHHHT------CHHHHHHHHHHHHHHHHHHTCSE-EEECC
T ss_pred EEEeCCCCccc------cchHHHHHHHHHHHHHHHcCCCE-EEEEc
Confidence 99987643211 12345556667777766654333 44433
No 479
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.58 E-value=0.72 Score=44.93 Aligned_cols=115 Identities=9% Similarity=0.032 Sum_probs=65.6
Q ss_pred CCCCceEEEEec-cc--chHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---cc------
Q psy12825 174 ESPDQKITVVGA-GQ--VGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---IA------ 241 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~--vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~e------ 241 (488)
.++.+++.|+|| |. +|..++..|+..|. +|++.|++++..+. ..++..... ... ....| .+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~-~~~~~~~~~---~~~-~~~~Dv~d~~~v~~~~ 100 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKR-VEPLAEELG---AFV-AGHCDVADAASIDAVF 100 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHH-HHHHHHHHT---CEE-EEECCTTCHHHHHHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHH-HHHHHHhcC---Cce-EEECCCCCHHHHHHHH
Confidence 345678899998 66 99999999999987 89999998654332 333332210 111 11222 21
Q ss_pred -----ccCCCcEEEEeccccc-----CC--Ccch---HhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeC
Q psy12825 242 -----MSEGSRIVIITAGVRS-----LV--GETR---LQLVDRNVKIFKDLIPKIAKG-SPDCILLIISN 295 (488)
Q Consensus 242 -----al~dADiVIitag~~~-----k~--G~~r---~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TN 295 (488)
.+...|++|..+|... .+ ..+. ...+..|+.-...+.+.+..+ ...+.||+++-
T Consensus 101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 1347899999998653 11 1121 233455554333344443332 23567777764
No 480
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=93.58 E-value=0.084 Score=51.74 Aligned_cols=113 Identities=16% Similarity=0.041 Sum_probs=67.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHH-HHHHHHhhcCCCCCCCcEEEcCC---c----cccCC
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCK-GEMLDLQHGAPFLRSPKIESGSD---I----AMSEG 245 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~-g~~~dL~~~~~~~~~~~v~~ttd---~----eal~d 245 (488)
.+.+||.|+|| |.+|..++..|+..|. +|+.+|++.+... .....+... ....+. ..| . +.+++
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~-~~Dl~d~~~~~~~~~~ 84 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGY--RVHGLVARRSSDTRWRLRELGIE----GDIQYE-DGDMADACSVQRAVIK 84 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCHHHHHTTCG----GGEEEE-ECCTTCHHHHHHHHHH
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCCccccccchhhcccc----CceEEE-ECCCCCHHHHHHHHHH
Confidence 35689999999 9999999999999886 8999998654311 111122100 011111 223 2 23554
Q ss_pred --CcEEEEecccccCC--CcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 246 --SRIVIITAGVRSLV--GETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 246 --ADiVIitag~~~k~--G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
.|+||.+++..... .....+.+..|+.-...+.+.+.+......+|++|
T Consensus 85 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S 137 (335)
T 1rpn_A 85 AQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAS 137 (335)
T ss_dssp HCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred cCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 59999998753211 12344556778777777888877765323455555
No 481
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=93.58 E-value=0.12 Score=52.33 Aligned_cols=70 Identities=9% Similarity=0.066 Sum_probs=44.7
Q ss_pred CCCCceEEEEecccchH-HHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCccc-cC--CCcEE
Q psy12825 174 ESPDQKITVVGAGQVGM-ACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDIAM-SE--GSRIV 249 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~-~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~ea-l~--dADiV 249 (488)
.|++.||+|||+|.++. .++..+...+. .-+.++|+++++++..+..+. ..+ ..+|+++ +. +.|+|
T Consensus 23 Mm~~irvgiiG~G~~~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~~-------~~~--~~~~~~~ll~~~~vD~V 92 (361)
T 3u3x_A 23 MMDELRFAAVGLNHNHIYGQVNCLLRAGA-RLAGFHEKDDALAAEFSAVYA-------DAR--RIATAEEILEDENIGLI 92 (361)
T ss_dssp ---CCEEEEECCCSTTHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHHHSS-------SCC--EESCHHHHHTCTTCCEE
T ss_pred hccCcEEEEECcCHHHHHHHHHHhhcCCc-EEEEEEcCCHHHHHHHHHHcC-------CCc--ccCCHHHHhcCCCCCEE
Confidence 34678999999999885 45555554443 225688999988776544432 112 3467754 44 58999
Q ss_pred EEec
Q psy12825 250 IITA 253 (488)
Q Consensus 250 Iita 253 (488)
+++.
T Consensus 93 ~I~t 96 (361)
T 3u3x_A 93 VSAA 96 (361)
T ss_dssp EECC
T ss_pred EEeC
Confidence 9985
No 482
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=93.57 E-value=0.48 Score=45.34 Aligned_cols=113 Identities=12% Similarity=0.160 Sum_probs=67.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC-ChhHHHHHHHHHhhcCCCCCCCcEEEcCCc---c----c---
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-NEDRCKGEMLDLQHGAPFLRSPKIESGSDI---A----M--- 242 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di-~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~---e----a--- 242 (488)
++.++|.|+|| |.+|..++..|+..|. +|++.++ +++..+....++.... ....+ ...|. + .
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~-~~~D~~~~~~v~~~~~~ 100 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGL--KVWINYRSNAEVADALKNELEEKG---YKAAV-IKFDAASESDFIEAIQT 100 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT---CCEEE-EECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC---CceEE-EECCCCCHHHHHHHHHH
Confidence 34568889998 9999999999999987 8999998 5555555555554321 11111 12232 1 1
Q ss_pred ----cCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEe
Q psy12825 243 ----SEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 243 ----l~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~T 294 (488)
+.+.|++|..+|...... .+ -...+..|+. +.+.+.+.+.+.. .+.||+++
T Consensus 101 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~is 165 (271)
T 4iin_A 101 IVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVA 165 (271)
T ss_dssp HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEe
Confidence 237899999998754321 11 1233444443 3455555555443 35566665
No 483
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=93.56 E-value=0.15 Score=49.58 Aligned_cols=106 Identities=16% Similarity=0.140 Sum_probs=66.0
Q ss_pred CCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cccCC-
Q psy12825 174 ESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMSEG- 245 (488)
Q Consensus 174 ~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal~d- 245 (488)
..+.++|.|+|| |.+|+.++..|+..|. +|+++|++.+. +. + . ..+... +|. +.+++
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~-~~----l-~-------~~~~~~Dl~d~~~~~~~~~~~ 73 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNV--EVFGTSRNNEA-KL----P-N-------VEMISLDIMDSQRVKKVISDI 73 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCTTC-CC----T-T-------EEEEECCTTCHHHHHHHHHHH
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCC--EEEEEecCCcc-cc----c-e-------eeEEECCCCCHHHHHHHHHhc
Confidence 345678999999 9999999999999886 89999987643 11 1 1 111111 122 23454
Q ss_pred -CcEEEEecccccC--CCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 246 -SRIVIITAGVRSL--VGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 246 -ADiVIitag~~~k--~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
.|+||.+++.... ......+.+..|+.-...+.+.+.+......+|++|
T Consensus 74 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S 125 (321)
T 2pk3_A 74 KPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIG 125 (321)
T ss_dssp CCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred CCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEc
Confidence 8999999875421 111344566778887777777775553334566555
No 484
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=93.55 E-value=0.072 Score=56.72 Aligned_cols=67 Identities=13% Similarity=0.225 Sum_probs=48.5
Q ss_pred CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEE
Q psy12825 173 IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVII 251 (488)
Q Consensus 173 ~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIi 251 (488)
.....++|+|||.|.+|..+|..+..-|. +|+.+|++...... .... ..++ .++ +.+++||+||.
T Consensus 273 ~~L~GktVgIIG~G~IG~~vA~~l~~~G~--~V~v~d~~~~~~~~---a~~~------G~~~---~~l~ell~~aDiVi~ 338 (494)
T 3d64_A 273 VMIAGKIAVVAGYGDVGKGCAQSLRGLGA--TVWVTEIDPICALQ---AAME------GYRV---VTMEYAADKADIFVT 338 (494)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSCHHHHHH---HHTT------TCEE---CCHHHHTTTCSEEEE
T ss_pred cccCCCEEEEEccCHHHHHHHHHHHHCCC--EEEEEeCChHhHHH---HHHc------CCEe---CCHHHHHhcCCEEEE
Confidence 45678899999999999999998875554 89999998864311 1111 1121 245 56899999999
Q ss_pred ec
Q psy12825 252 TA 253 (488)
Q Consensus 252 ta 253 (488)
+.
T Consensus 339 ~~ 340 (494)
T 3d64_A 339 AT 340 (494)
T ss_dssp CS
T ss_pred CC
Confidence 96
No 485
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=93.54 E-value=0.64 Score=44.65 Aligned_cols=115 Identities=16% Similarity=0.212 Sum_probs=69.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhH-------HHHHHHHHhhcCCCCCCCcEE-EcCCc---c-
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDR-------CKGEMLDLQHGAPFLRSPKIE-SGSDI---A- 241 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~-------l~g~~~dL~~~~~~~~~~~v~-~ttd~---e- 241 (488)
++.+++.|+|+ |.+|..++..|+..|. +|++.|++.+. ++....++.... .++. ...|. +
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~ 76 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA--NVAIAAKSAVANPKLPGTIHSAAAAVNAAG-----GQGLALKCDIREEDQ 76 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCSCCTTSCCCHHHHHHHHHHHT-----SEEEEEECCTTCHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeccchhhhhhHHHHHHHHHHHHhcC-----CeEEEEeCCCCCHHH
Confidence 45678899998 9999999999999987 89999997653 444444444321 1211 12221 1
Q ss_pred ----------ccCCCcEEEEecccccCCC---cc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCCc
Q psy12825 242 ----------MSEGSRIVIITAGVRSLVG---ET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNPV 297 (488)
Q Consensus 242 ----------al~dADiVIitag~~~k~G---~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNPv 297 (488)
.+...|++|..+|...... .+ -...+..|+. +.+.+.+.+.+. ..+.||+++-..
T Consensus 77 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~ 151 (274)
T 3e03_A 77 VRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-PNPHILTLAPPP 151 (274)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-SSCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-CCceEEEECChH
Confidence 1347899999998653221 11 1233455554 445555555443 345677776543
No 486
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=93.53 E-value=0.73 Score=46.34 Aligned_cols=117 Identities=19% Similarity=0.185 Sum_probs=71.6
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhH-------HHHHHHHHhhcCCCCCCCcEE-EcCCc---
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDR-------CKGEMLDLQHGAPFLRSPKIE-SGSDI--- 240 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~-------l~g~~~dL~~~~~~~~~~~v~-~ttd~--- 240 (488)
..++.++|.|+|| |.+|..++..|+..|. +|+++|++++. ++....++.... .++. ...|.
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g-----~~~~~~~~Dv~d~ 113 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGA--NIVIAAKTAQPHPKLLGTIYTAAEEIEAVG-----GKALPCIVDVRDE 113 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHTT-----CEEEEEECCTTCH
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCC--EEEEEECChhhhhhhHHHHHHHHHHHHhcC-----CeEEEEEccCCCH
Confidence 3456678999998 9999999999999987 89999997763 444455554421 1221 12232
Q ss_pred c-----------ccCCCcEEEEecccccCC---Ccc---hHhhHhhhHH----HHHHHHHHHhccCCCcEEEEEeCCc
Q psy12825 241 A-----------MSEGSRIVIITAGVRSLV---GET---RLQLVDRNVK----IFKDLIPKIAKGSPDCILLIISNPV 297 (488)
Q Consensus 241 e-----------al~dADiVIitag~~~k~---G~~---r~dll~~N~~----ii~ei~~~I~~~~p~a~vIv~TNPv 297 (488)
+ .+.+.|++|..+|..... ..+ -...+..|+. +.+.+.+.+.+. ..+.||+++-+.
T Consensus 114 ~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~~ 190 (346)
T 3kvo_A 114 QQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS-KVAHILNISPPL 190 (346)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC-SSCEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCCEEEEECCHH
Confidence 1 134899999999864321 112 1234555655 334444444443 346678877554
No 487
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.51 E-value=0.11 Score=50.15 Aligned_cols=71 Identities=21% Similarity=0.346 Sum_probs=47.2
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCCh------hHHHHHHHHHhhcCCCCCCCcEEEc--CCc----ccc
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNE------DRCKGEMLDLQHGAPFLRSPKIESG--SDI----AMS 243 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~------e~l~g~~~dL~~~~~~~~~~~v~~t--td~----eal 243 (488)
++||.|+|| |.+|.+++..|+..|. +|+.++++. ++.+ ....+... ...+... +|. +++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~-~~~~l~~~-----~v~~v~~D~~d~~~l~~~~ 75 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGH--PTFLLVRESTASSNSEKAQ-LLESFKAS-----GANIVHGSIDDHASLVEAV 75 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCCCCTTTTHHHHH-HHHHHHTT-----TCEEECCCTTCHHHHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC--CEEEEECCcccccCHHHHH-HHHHHHhC-----CCEEEEeccCCHHHHHHHH
Confidence 578999999 9999999999999885 788998863 2222 11222211 1222211 122 368
Q ss_pred CCCcEEEEeccc
Q psy12825 244 EGSRIVIITAGV 255 (488)
Q Consensus 244 ~dADiVIitag~ 255 (488)
+++|+||.+++.
T Consensus 76 ~~~d~vi~~a~~ 87 (308)
T 1qyc_A 76 KNVDVVISTVGS 87 (308)
T ss_dssp HTCSEEEECCCG
T ss_pred cCCCEEEECCcc
Confidence 899999999864
No 488
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=93.48 E-value=0.15 Score=53.49 Aligned_cols=81 Identities=14% Similarity=0.106 Sum_probs=52.5
Q ss_pred CCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHH-hh---cCCC---------CCCCcEEEcCCc
Q psy12825 174 ESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDL-QH---GAPF---------LRSPKIESGSDI 240 (488)
Q Consensus 174 ~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL-~~---~~~~---------~~~~~v~~ttd~ 240 (488)
..++.||+|||+|.+|..++..+....-..=+.++|+++++++....++ .. .... .....+..++|+
T Consensus 20 ~~k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~ 99 (446)
T 3upl_A 20 TGKPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDN 99 (446)
T ss_dssp TTCCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCH
T ss_pred cCCceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCH
Confidence 3567899999999999988776654432234678899999887765544 20 0000 001235567888
Q ss_pred cc-cC--CCcEEEEecc
Q psy12825 241 AM-SE--GSRIVIITAG 254 (488)
Q Consensus 241 ea-l~--dADiVIitag 254 (488)
++ ++ +.|+|+++.+
T Consensus 100 eeLL~d~dIDaVviaTp 116 (446)
T 3upl_A 100 DLILSNPLIDVIIDATG 116 (446)
T ss_dssp HHHHTCTTCCEEEECSC
T ss_pred HHHhcCCCCCEEEEcCC
Confidence 53 44 6999999864
No 489
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=93.47 E-value=0.065 Score=51.09 Aligned_cols=99 Identities=19% Similarity=0.173 Sum_probs=65.6
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcC---Cc----cccCCCcEE
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGS---DI----AMSEGSRIV 249 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~tt---d~----eal~dADiV 249 (488)
++|.|+|| |.+|..++..|+..+. +|+++|++++... .. ...+ ... |. +.++++|+|
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~------~~------~~~~-~~~Dl~d~~~~~~~~~~~d~v 67 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAH--EVRLSDIVDLGAA------EA------HEEI-VACDLADAQAVHDLVKDCDGI 67 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEE--EEEECCSSCCCCC------CT------TEEE-CCCCTTCHHHHHHHHTTCSEE
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCCCcccc------CC------CccE-EEccCCCHHHHHHHHcCCCEE
Confidence 58999999 9999999999988875 8999998764210 00 0011 112 22 357899999
Q ss_pred EEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 250 IITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 250 Iitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
|.+++.. ......+.+..|+.-...+.+.+.+.... .+|++|
T Consensus 68 i~~a~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~S 109 (267)
T 3ay3_A 68 IHLGGVS--VERPWNDILQANIIGAYNLYEAARNLGKP-RIVFAS 109 (267)
T ss_dssp EECCSCC--SCCCHHHHHHHTHHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred EECCcCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEeC
Confidence 9998754 12233456677888777788877765433 455554
No 490
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=93.46 E-value=0.054 Score=54.17 Aligned_cols=70 Identities=9% Similarity=0.138 Sum_probs=44.8
Q ss_pred CCceEEEEecccchHHHHHHHHH-cCCCCeEEEEeCChhH-HHHHHHHHhhcCCCCCCCcEEEcCCcccc------CCCc
Q psy12825 176 PDQKITVVGAGQVGMACTYSILT-QGIYSNFCLIDSNEDR-CKGEMLDLQHGAPFLRSPKIESGSDIAMS------EGSR 247 (488)
Q Consensus 176 ~~~KIaIIGAG~vG~~ia~~La~-~~l~~el~L~Di~~e~-l~g~~~dL~~~~~~~~~~~v~~ttd~eal------~dAD 247 (488)
++.||+|||+|.+|..++..+.. .....-+.++|+++++ ....+.++. .. ..+.+++++ .+.|
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g--------~~-~~~~~~e~ll~~~~~~~iD 73 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMG--------VT-TTYAGVEGLIKLPEFADID 73 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTT--------CC-EESSHHHHHHHSGGGGGEE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcC--------CC-cccCCHHHHHhccCCCCCc
Confidence 46799999999999998888765 3322235678998776 343332221 11 123344433 6789
Q ss_pred EEEEecc
Q psy12825 248 IVIITAG 254 (488)
Q Consensus 248 iVIitag 254 (488)
+||++.+
T Consensus 74 vV~~atp 80 (312)
T 1nvm_B 74 FVFDATS 80 (312)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9999964
No 491
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=93.46 E-value=0.012 Score=59.18 Aligned_cols=42 Identities=21% Similarity=0.154 Sum_probs=34.0
Q ss_pred CcEEEEe-cchhHHHHHHHHHhh-hhHHHHHHHHH--HHHhhhCCC
Q psy12825 131 QKITVVG-AGQVGMACTYSILTQ-TMARDAVSTVD--RLLSQVAPS 172 (488)
Q Consensus 131 ~ki~vvg-~g~vg~~~a~~~~~k-~la~eivlid~--~~~~e~~~~ 172 (488)
.||+||| +|+||.++||.|..+ ++++|++++|. +..++.++.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl 46 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDL 46 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHh
Confidence 4899999 899999999999888 89999999883 344554443
No 492
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=93.45 E-value=0.53 Score=46.03 Aligned_cols=148 Identities=16% Similarity=0.186 Sum_probs=85.3
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCC---c----------
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSD---I---------- 240 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd---~---------- 240 (488)
.+.+.+.|.|| +.+|..++..|+..|. .|++.|++++.++..+.++.... +....| .
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~g~~~-------~~~~~Dv~~~~~v~~~~~~~ 97 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEIGGGA-------VGIQADSANLAELDRLYEKV 97 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCTTC-------EEEECCTTCHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcCCCe-------EEEEecCCCHHHHHHHHHHH
Confidence 34556667788 8899999999999997 89999999999988777764321 111112 1
Q ss_pred -cccCCCcEEEEecccccC-C--Ccc---hHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeCCc------hhHHHHHHH
Q psy12825 241 -AMSEGSRIVIITAGVRSL-V--GET---RLQLVDRNVKIFKDLIPKIAKG-SPDCILLIISNPV------DVLTYISWK 306 (488)
Q Consensus 241 -eal~dADiVIitag~~~k-~--G~~---r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TNPv------di~t~~~~k 306 (488)
+.+-.-|++|..+|.... + ..+ -.+.+.-|+.-.-.+++..-.+ ...+.||+++--. +...|.+.|
T Consensus 98 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asK 177 (273)
T 4fgs_A 98 KAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASK 177 (273)
T ss_dssp HHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHH
Confidence 235578999999986432 2 122 2234555554333333332222 2245566665222 123344433
Q ss_pred hcCCCCCcEEeecCChHHHHHHHHHHHHhCCCCCCceeEEEe
Q psy12825 307 LSGFPKNRVIGSGTNLDSMRFRVLLAQKLGLSPESVHGFIIG 348 (488)
Q Consensus 307 ~sg~p~~rViG~gt~lds~R~~~~lA~~Lgv~p~~V~~~V~G 348 (488)
.. + ..+-+.+|..++ |..|++-.+-
T Consensus 178 aa---------v------~~ltr~lA~Ela--~~gIrVN~V~ 202 (273)
T 4fgs_A 178 AA---------L------RSFARNWILDLK--DRGIRINTLS 202 (273)
T ss_dssp HH---------H------HHHHHHHHHHTT--TSCEEEEEEE
T ss_pred HH---------H------HHHHHHHHHHhc--ccCeEEEEEe
Confidence 21 1 235667788774 5566654443
No 493
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=93.44 E-value=0.35 Score=50.30 Aligned_cols=116 Identities=14% Similarity=0.194 Sum_probs=70.0
Q ss_pred hhHHHHHHHHHHH-HhhhCCC----CCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCC
Q psy12825 153 TMARDAVSTVDRL-LSQVAPS----IESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAP 227 (488)
Q Consensus 153 ~la~eivlid~~~-~~e~~~~----~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~ 227 (488)
.+++.+...+... .++.... .....++|+|||.|.||..+|..+..-|. +|..||+++...
T Consensus 127 ~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~G~--~V~~yd~~~~~~------------ 192 (416)
T 3k5p_A 127 MLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESLGM--TVRYYDTSDKLQ------------ 192 (416)
T ss_dssp HHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECTTCCCC------------
T ss_pred HHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHCCC--EEEEECCcchhc------------
Confidence 4666666666442 2222111 34567899999999999999998876676 999999864211
Q ss_pred CCCCCcEEEcCCc-cccCCCcEEEEecccccCCCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe--CCch
Q psy12825 228 FLRSPKIESGSDI-AMSEGSRIVIITAGVRSLVGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS--NPVD 298 (488)
Q Consensus 228 ~~~~~~v~~ttd~-eal~dADiVIitag~~~k~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T--NPvd 298 (488)
........++ +.++.||+|++...... +...++ | .+.+....|.+++|+++ .++|
T Consensus 193 ---~~~~~~~~sl~ell~~aDvV~lhvPlt~----~T~~li--~-------~~~l~~mk~gailIN~aRG~vvd 250 (416)
T 3k5p_A 193 ---YGNVKPAASLDELLKTSDVVSLHVPSSK----STSKLI--T-------EAKLRKMKKGAFLINNARGSDVD 250 (416)
T ss_dssp ---BTTBEECSSHHHHHHHCSEEEECCCC---------CCB--C-------HHHHHHSCTTEEEEECSCTTSBC
T ss_pred ---ccCcEecCCHHHHHhhCCEEEEeCCCCH----HHhhhc--C-------HHHHhhCCCCcEEEECCCChhhh
Confidence 0011233455 46889999999863211 011111 1 12344456789999997 3455
No 494
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=93.42 E-value=0.039 Score=53.82 Aligned_cols=109 Identities=16% Similarity=0.151 Sum_probs=62.9
Q ss_pred CceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCCCCCCcEEEcCCc-cccCCCcEEEEecc
Q psy12825 177 DQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPFLRSPKIESGSDI-AMSEGSRIVIITAG 254 (488)
Q Consensus 177 ~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~-eal~dADiVIitag 254 (488)
|++|.|+|| |.+|..++..|+..| ..+.+.+.+....+. +.....+ ....+. ..+. +.++++|+||.+++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~~~~~~~~~----~~~~~~~-~~~Dl~-~~~~~~~~~~~d~vih~a~ 72 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN--EIVVIDNLSSGNEEF----VNEAARL-VKADLA-ADDIKDYLKGAEEVWHIAA 72 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS--CEEEECCCSSCCGGG----SCTTEEE-ECCCTT-TSCCHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC--CEEEEEcCCCCChhh----cCCCcEE-EECcCC-hHHHHHHhcCCCEEEECCC
Confidence 468999998 999999999998887 234443333322211 0000000 000000 0122 45789999999987
Q ss_pred cccC--CCcchHhhHhhhHHHHHHHHHHHhccCCCcEEEEEe
Q psy12825 255 VRSL--VGETRLQLVDRNVKIFKDLIPKIAKGSPDCILLIIS 294 (488)
Q Consensus 255 ~~~k--~G~~r~dll~~N~~ii~ei~~~I~~~~p~a~vIv~T 294 (488)
.+.. ......+.+..|+.-...+.+.+.+.... .+|++|
T Consensus 73 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~S 113 (313)
T 3ehe_A 73 NPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVS-RIVFTS 113 (313)
T ss_dssp CCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCC-EEEEEC
T ss_pred CCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeC
Confidence 5422 12234566778888888888888776544 355554
No 495
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=93.37 E-value=0.54 Score=45.00 Aligned_cols=117 Identities=12% Similarity=0.059 Sum_probs=68.5
Q ss_pred CCCCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC-ChhHHHHHHHHHhhcCCCCCCCcEEEcCCc---c------
Q psy12825 173 IESPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-NEDRCKGEMLDLQHGAPFLRSPKIESGSDI---A------ 241 (488)
Q Consensus 173 ~~~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di-~~e~l~g~~~dL~~~~~~~~~~~v~~ttd~---e------ 241 (488)
..++.+++.|+|+ |.+|..++..|+..|. +|++.|. +.+.++....++.... ..... ...|. +
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~Dv~~~~~v~~~~ 87 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGA--KVVVNYANSTKDAEKVVSEIKALG---SDAIA-IKADIRQVPEIVKLF 87 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT---CCEEE-EECCTTSHHHHHHHH
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC---CcEEE-EEcCCCCHHHHHHHH
Confidence 3456678888898 8999999999999987 8888776 4555666666665421 11111 22232 1
Q ss_pred -----ccCCCcEEEEecccccCCC---cch---HhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEeC
Q psy12825 242 -----MSEGSRIVIITAGVRSLVG---ETR---LQLVDRNVKIFKDLIPKIAKG-SPDCILLIISN 295 (488)
Q Consensus 242 -----al~dADiVIitag~~~k~G---~~r---~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~TN 295 (488)
.+...|++|..+|...... .+. ...+..|+.-...+.+.+..+ .+.+.||+++-
T Consensus 88 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 88 DQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 1236799999998753211 122 233455554333344443333 22456776654
No 496
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=93.37 E-value=0.041 Score=53.84 Aligned_cols=72 Identities=15% Similarity=0.122 Sum_probs=48.3
Q ss_pred CCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCCh------hHHHHHHHHHhhcCCCCCCCcEEEc--CCc----cc
Q psy12825 176 PDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSNE------DRCKGEMLDLQHGAPFLRSPKIESG--SDI----AM 242 (488)
Q Consensus 176 ~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~~------e~l~g~~~dL~~~~~~~~~~~v~~t--td~----ea 242 (488)
++++|.|+|| |.+|.+++..|+..+. +|++++++. ++.+. ..++... ...+... +|. ++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~-l~~~~~~-----~v~~v~~D~~d~~~l~~a 74 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSH--PTFIYARPLTPDSTPSSVQL-REEFRSM-----GVTIIEGEMEEHEKMVSV 74 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTC--CEEEEECCCCTTCCHHHHHH-HHHHHHT-----TCEEEECCTTCHHHHHHH
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCC--cEEEEECCcccccChHHHHH-HHHhhcC-----CcEEEEecCCCHHHHHHH
Confidence 3578999998 9999999999999885 899999875 23321 2223221 1222221 122 46
Q ss_pred cCCCcEEEEeccc
Q psy12825 243 SEGSRIVIITAGV 255 (488)
Q Consensus 243 l~dADiVIitag~ 255 (488)
++++|+||.+++.
T Consensus 75 ~~~~d~vi~~a~~ 87 (321)
T 3c1o_A 75 LKQVDIVISALPF 87 (321)
T ss_dssp HTTCSEEEECCCG
T ss_pred HcCCCEEEECCCc
Confidence 8999999999864
No 497
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=93.36 E-value=0.31 Score=48.18 Aligned_cols=76 Identities=17% Similarity=0.308 Sum_probs=53.2
Q ss_pred CCCceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeCC----------hhHHHHHHHHHhhcCCCCCCCcEE-EcCCc--
Q psy12825 175 SPDQKITVVGA-GQVGMACTYSILTQGIYSNFCLIDSN----------EDRCKGEMLDLQHGAPFLRSPKIE-SGSDI-- 240 (488)
Q Consensus 175 ~~~~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di~----------~e~l~g~~~dL~~~~~~~~~~~v~-~ttd~-- 240 (488)
++.+++.|+|+ |.+|..++..|+..|. +|++.|++ .+.++....++.... .++. ...|.
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d 97 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGA--RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG-----GEAVADGSNVAD 97 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT-----CEEEEECCCTTS
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCcccccccccccHHHHHHHHHHHHhcC-----CcEEEEECCCCC
Confidence 44567888898 9999999999999987 89999987 666776666665431 1222 22232
Q ss_pred -c-----------ccCCCcEEEEeccccc
Q psy12825 241 -A-----------MSEGSRIVIITAGVRS 257 (488)
Q Consensus 241 -e-----------al~dADiVIitag~~~ 257 (488)
+ .+...|++|..+|...
T Consensus 98 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 126 (322)
T 3qlj_A 98 WDQAAGLIQTAVETFGGLDVLVNNAGIVR 126 (322)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEECCCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 1 1237899999998653
No 498
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=93.35 E-value=0.13 Score=49.90 Aligned_cols=108 Identities=18% Similarity=0.189 Sum_probs=62.6
Q ss_pred ceEEEEec-ccchHHHHHHHHHcCCCCeEEEEeC-ChhH---HHHHHHHHhhcCCCCCCCcEEE-cC---C---c-cccC
Q psy12825 178 QKITVVGA-GQVGMACTYSILTQGIYSNFCLIDS-NEDR---CKGEMLDLQHGAPFLRSPKIES-GS---D---I-AMSE 244 (488)
Q Consensus 178 ~KIaIIGA-G~vG~~ia~~La~~~l~~el~L~Di-~~e~---l~g~~~dL~~~~~~~~~~~v~~-tt---d---~-eal~ 244 (488)
++|.|+|| |.+|++++..|+..|. +|+.+++ +++. ... ..++... ..++.. .. | . ++++
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~ 73 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGY--SVNTTIRADPERKRDVSF-LTNLPGA-----SEKLHFFNADLSNPDSFAAAIE 73 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC--EEEEECCCC----CCCHH-HHTSTTH-----HHHEEECCCCTTCGGGGHHHHT
T ss_pred CEEEEECChhHHHHHHHHHHHHCCC--EEEEEEeCCccchhHHHH-HHhhhcc-----CCceEEEecCCCCHHHHHHHHc
Confidence 68999998 9999999999999886 8888877 5432 111 1111100 001111 11 2 2 3578
Q ss_pred CCcEEEEecccccCCCcc-hHhhHhhhHHHHHHHHHHHhcc-CCCcEEEEEe
Q psy12825 245 GSRIVIITAGVRSLVGET-RLQLVDRNVKIFKDLIPKIAKG-SPDCILLIIS 294 (488)
Q Consensus 245 dADiVIitag~~~k~G~~-r~dll~~N~~ii~ei~~~I~~~-~p~a~vIv~T 294 (488)
++|+||.+++........ ..+++..|+.-...+.+...+. ... .+|++|
T Consensus 74 ~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~-~iV~~S 124 (322)
T 2p4h_X 74 GCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVK-RFIYTS 124 (322)
T ss_dssp TCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCC-EEEEEE
T ss_pred CCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEec
Confidence 999999998532101111 2236677888888888887766 233 455554
No 499
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=93.34 E-value=0.0064 Score=61.61 Aligned_cols=42 Identities=24% Similarity=0.184 Sum_probs=35.2
Q ss_pred CcEEEEe-cchhHHHHHHHHHhhhhHHH-----HHHHHH-----HHHhhhCCC
Q psy12825 131 QKITVVG-AGQVGMACTYSILTQTMARD-----AVSTVD-----RLLSQVAPS 172 (488)
Q Consensus 131 ~ki~vvg-~g~vg~~~a~~~~~k~la~e-----ivlid~-----~~~~e~~~~ 172 (488)
.||+|+| +|+||.++||.|+.+++++| ++++|. ++.++.++.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL 56 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMEL 56 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhh
Confidence 5999999 79999999999999999999 998873 455555543
No 500
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=93.34 E-value=0.21 Score=49.87 Aligned_cols=87 Identities=16% Similarity=0.225 Sum_probs=58.9
Q ss_pred hhhHHHHHHHHHHH-HhhhCC--CCCCCCceEEEEecccchHHHHHHHHHcCCCCeEEEEeCChhHHHHHHHHHhhcCCC
Q psy12825 152 QTMARDAVSTVDRL-LSQVAP--SIESPDQKITVVGAGQVGMACTYSILTQGIYSNFCLIDSNEDRCKGEMLDLQHGAPF 228 (488)
Q Consensus 152 k~la~eivlid~~~-~~e~~~--~~~~~~~KIaIIGAG~vG~~ia~~La~~~l~~el~L~Di~~e~l~g~~~dL~~~~~~ 228 (488)
-.+++.+...+... .++... ......++|+|||.|.||..++..+...|. +|+.+|++.+... ..+. .
T Consensus 114 L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~--~~~~--g--- 184 (313)
T 2ekl_A 114 IAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAMGM--KVLAYDILDIREK--AEKI--N--- 184 (313)
T ss_dssp HHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHTTC--EEEEECSSCCHHH--HHHT--T---
T ss_pred HHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHCCC--EEEEECCCcchhH--HHhc--C---
Confidence 45777777776443 222211 145567899999999999999999887776 8999999876432 1111 0
Q ss_pred CCCCcEEEcCCc-cccCCCcEEEEec
Q psy12825 229 LRSPKIESGSDI-AMSEGSRIVIITA 253 (488)
Q Consensus 229 ~~~~~v~~ttd~-eal~dADiVIita 253 (488)
.. . .++ +.+++||+|+++.
T Consensus 185 ---~~--~-~~l~ell~~aDvVvl~~ 204 (313)
T 2ekl_A 185 ---AK--A-VSLEELLKNSDVISLHV 204 (313)
T ss_dssp ---CE--E-CCHHHHHHHCSEEEECC
T ss_pred ---ce--e-cCHHHHHhhCCEEEEec
Confidence 11 2 255 4588999999986
Done!