BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12833
(254 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|B Chain B, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|C Chain C, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|D Chain D, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
Length = 261
Score = 308 bits (790), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/252 (61%), Positives = 189/252 (75%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
+KG+V ++TGGASGLG AT L DLP S GE+ AK+LG + FAP DVTS
Sbjct: 8 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 67
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E+DVQ A+ L K FG++DV VNCAGI+ A K +N KG H+L+DF+R+L VN +GTFN
Sbjct: 68 EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 127
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
V RL A + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 128 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
GIRV TIAPGLF TPLL+ L EKVRNFLA +P P RLG P E+A LVQ+II NP +N
Sbjct: 188 PIGIRVMTIAPGLFGTPLLTSLPEKVRNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 247
Query: 242 GEVIRIDGALRM 253
GEVIR+DGA+RM
Sbjct: 248 GEVIRLDGAIRM 259
>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
pdb|2O23|B Chain B, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
Length = 265
Score = 305 bits (780), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/252 (61%), Positives = 188/252 (74%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
+KG+V ++TGGASGLG AT L DLP S GE+ AK+LG + FAP DVTS
Sbjct: 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 69
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E+DVQ A+ L K FG++DV VNCAGI+ A K +N KG H+L+DF+R+L VN +GTFN
Sbjct: 70 EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 129
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
V RL A + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 130 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 189
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
GIRV TIAPGLF TPLL+ L EKV NFLA +P P RLG P E+A LVQ+II NP +N
Sbjct: 190 PIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 249
Query: 242 GEVIRIDGALRM 253
GEVIR+DGA+RM
Sbjct: 250 GEVIRLDGAIRM 261
>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As
3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh),
Endoplasmic Reticulum- Associated Amyloid Beta-peptide
Binding Protein (erab)]
Length = 261
Score = 304 bits (779), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/252 (61%), Positives = 188/252 (74%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
+KG+V ++TGGASGLG AT L DLP S GE+ AK+LG + FAP DVTS
Sbjct: 8 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 67
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E+DVQ A+ L K FG++DV VNCAGI+ A K +N KG H+L+DF+R+L VN +GTFN
Sbjct: 68 EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 127
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
V RL A + +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 128 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
GIRV TIAPGLF TPLL+ L EKV NFLA +P P RLG P E+A LVQ+II NP +N
Sbjct: 188 PIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 247
Query: 242 GEVIRIDGALRM 253
GEVIR+DGA+RM
Sbjct: 248 GEVIRLDGAIRM 259
>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 303 bits (777), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 149/252 (59%), Positives = 191/252 (75%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
+KG+V ++TGGASGLG +T L D+P SEGE+ AK+LG + FAP +VTS
Sbjct: 8 VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTS 67
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E++VQ A+ L K+ FG++DV VNCAGI+ A K ++ K VH+L+DF+R++ VN +GTFN
Sbjct: 68 EKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFN 127
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
V RL A ++ +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 128 VIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
GIRV TIAPGLF TPLL+ L +KVRNFLA +P P RLG P E+A LVQ +I NP +N
Sbjct: 188 PIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQMVIENPFLN 247
Query: 242 GEVIRIDGALRM 253
GEVIR+DGA+RM
Sbjct: 248 GEVIRLDGAIRM 259
>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
Length = 260
Score = 303 bits (776), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 149/252 (59%), Positives = 191/252 (75%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
+KG+V ++TGGASGLG +T L D+P SEGE+ AK+LG + FAP +VTS
Sbjct: 7 VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTS 66
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E++VQ A+ L K+ FG++DV VNCAGI+ A K ++ K VH+L+DF+R++ VN +GTFN
Sbjct: 67 EKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFN 126
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
V RL A ++ +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 127 VIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 186
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
GIRV TIAPGLF TPLL+ L +KVRNFLA +P P RLG P E+A LVQ +I NP +N
Sbjct: 187 PIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQMVIENPFLN 246
Query: 242 GEVIRIDGALRM 253
GEVIR+DGA+RM
Sbjct: 247 GEVIRLDGAIRM 258
>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 301 bits (771), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/252 (58%), Positives = 190/252 (75%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
+KG+V ++TGGASGLG +T L D+P SEGE+ AK+LG + FAP +VTS
Sbjct: 8 VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTS 67
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E++VQ A+ L K+ FG++DV VNCAGI+ A K ++ K VH+L+DF+R++ VN +GTFN
Sbjct: 68 EKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFN 127
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
V RL A ++ +N+ ++ G RGVIINTAS+AA+EGQ GQ AYSASK GIVGMTLP+ARDLA
Sbjct: 128 VIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 187
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLIN 241
GIRV TIAPGLF TPLL+ L + VRNFLA +P P RLG P E+A LVQ +I NP +N
Sbjct: 188 PIGIRVVTIAPGLFATPLLTTLPDTVRNFLASQVPFPSRLGDPAEYAHLVQMVIENPFLN 247
Query: 242 GEVIRIDGALRM 253
GEVIR+DGA+RM
Sbjct: 248 GEVIRLDGAIRM 259
>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
pdb|3TL3|B Chain B, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
Length = 257
Score = 224 bits (571), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/255 (49%), Positives = 167/255 (65%), Gaps = 10/255 (3%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
++ V +VTGGASGLG AT + D+ GE V +LG +FA DVT
Sbjct: 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVADLGDRARFAAADVTD 63
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E V A+ L ++ G L + VNCAG A ++ + + V SL F++I+ +N VG+FN
Sbjct: 64 EAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDG--VFSLAAFRKIVDINLVGSFN 120
Query: 122 VARLSAQLIHENKL---NEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
V RL+A+ I + + N + RGVIINTAS+AA++GQ GQ AYSASK G+VGMTLP+AR
Sbjct: 121 VLRLAAERIAKTEPVGPNAEE-RGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
DLA IRV TIAPGLFDTPLL+ L E+ R L + +P P RLG+PDE+ L II NP
Sbjct: 180 DLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIENP 239
Query: 239 LINGEVIRIDGALRM 253
++NGEVIR+DGA+RM
Sbjct: 240 MLNGEVIRLDGAIRM 254
>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa
Dehydrogenase From Thermus Thermophilus Hb8
pdb|1UAY|B Chain B, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa
Dehydrogenase From Thermus Thermophilus Hb8
Length = 242
Score = 218 bits (556), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/246 (51%), Positives = 161/246 (65%), Gaps = 12/246 (4%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
LVTGGASGLG+A + DL EGE D+ + DVT EEDV++
Sbjct: 6 LVTGGASGLGRAAALALKARGYRVVVLDL-RREGE--------DLIYVEGDVTREEDVRR 56
Query: 68 AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
AV ++ L V+ AG+ A KI K H L+ F+R+L VN +GTFNV RL+A
Sbjct: 57 AVARAQEE-APLFAVVSAAGVGLAEKILG--KEGPHGLESFRRVLEVNLLGTFNVLRLAA 113
Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRV 187
+ EN + +G RGVI+NTAS+AA+EGQ GQ AY+ASK G+V +TLP AR+LAG GIRV
Sbjct: 114 WAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRV 173
Query: 188 NTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLINGEVIRI 247
T+APGLFDTPLL L EK + LA +P P RLG P+E+A LV I+ NP++NGEV+R+
Sbjct: 174 VTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVVRL 233
Query: 248 DGALRM 253
DGALRM
Sbjct: 234 DGALRM 239
>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|B Chain B, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|C Chain C, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|D Chain D, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|E Chain E, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|F Chain F, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|G Chain G, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|H Chain H, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
Length = 257
Score = 211 bits (536), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/252 (48%), Positives = 156/252 (61%), Gaps = 2/252 (0%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVT 60
LK V +VTG +SGLG A DL GE A ELG V+F DVT
Sbjct: 4 QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVT 63
Query: 61 SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
+E D A+ K FG + VNCAG + KI + H+LD F R + VN +GTF
Sbjct: 64 NEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILG--RSGPHALDSFARTVAVNLIGTF 121
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
N RL+A++ + + + DG RGVI+NTASIAA++GQ GQ AY+ASK G+ +TLP AR+L
Sbjct: 122 NXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAREL 181
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
A GIRV TIAPG+FDTP + + V++ LA S+P P RLG +E+A LV+ I N +
Sbjct: 182 ARFGIRVVTIAPGIFDTPXXAGXPQDVQDALAASVPFPPRLGRAEEYAALVKHICENTXL 241
Query: 241 NGEVIRIDGALR 252
NGEVIR+DGALR
Sbjct: 242 NGEVIRLDGALR 253
>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|B Chain B, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|C Chain C, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|D Chain D, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
Length = 281
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 150/253 (59%), Gaps = 3/253 (1%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
+G +V+GGA GLG+AT + DL +G+++A ELG +F +VTS
Sbjct: 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTS 87
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNC-AGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
E+ V A+ + G+L V G A +I + G+ + F + + + GT+
Sbjct: 88 EDSVLAAIE-AANQLGRLRYAVVAHGGFGVAQRIVQRD-GSPADMGGFTKTIDLYLNGTY 145
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
NVARL A I + E+G RG ++ TASIA YEGQ GQ AY+A+K+G++G+T+ ARDL
Sbjct: 146 NVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDL 205
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNPLI 240
+ AGIRVNTIAPG TP++ + E+ A +IP P+RLG PDEFA ++TN I
Sbjct: 206 SSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTNGYI 265
Query: 241 NGEVIRIDGALRM 253
NGEV+R+DGA R
Sbjct: 266 NGEVMRLDGAQRF 278
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 130/258 (50%), Gaps = 19/258 (7%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEG-ESVAKEL---GPDVKFAPV 57
LKG +VTG + GLGKA L P S ++ A+E G +V A
Sbjct: 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
DV + EDV+ V D+FG++D+ VN AGI+ + S D+ +L N
Sbjct: 63 DVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLK------MSEKDWDDVLNTNLK 116
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
+ + ++++ + K G IIN SIA G +GQ Y+ASK+G++G T +A
Sbjct: 117 SAYLCTKAVSKIMLKQK------SGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIA 170
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
++ A GI N +APG+ T + +L +KV+ +IP +R G P+E A +V + ++
Sbjct: 171 KEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPL-KRFGTPEEVANVVGFLASD 229
Query: 238 P--LINGEVIRIDGALRM 253
I G+VI IDG L M
Sbjct: 230 DSNYITGQVINIDGGLVM 247
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 17/256 (6%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L+G V LVTG + G+GKA S ++++ LG + K ++VT+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E ++ + D FG +D+ VN AGI+ + + +++ I+ N F
Sbjct: 70 PESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKE------EEWSDIMETNLTSIFR 123
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+++ + + + + +G IIN S+ G +GQ Y+A+K+G++G T MAR++A
Sbjct: 124 LSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVA 177
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
G+ VNT+APG +T + LN++ R +PA RLG P E A V + + +P
Sbjct: 178 SRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 235
Query: 239 LINGEVIRIDGALRMI 254
I GE + ++G + MI
Sbjct: 236 YITGETLHVNGGMYMI 251
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 17/256 (6%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L+G V LVTG + G+GKA S ++++ LG + K ++VT+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E ++ + D FG +D+ VN AGI+ + + +++ I+ N F
Sbjct: 70 PESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKE------EEWSDIMETNLTSIFR 123
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+++ + + + + +G IIN S+ G +GQ Y+A+K+G++G T MAR++A
Sbjct: 124 LSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVA 177
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
G+ VNT+APG +T + LN++ R +PA RLG P E A V + + +P
Sbjct: 178 SRGVTVNTVAPGAIETDMTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 235
Query: 239 LINGEVIRIDGALRMI 254
I GE + ++G + MI
Sbjct: 236 YITGETLHVNGGMYMI 251
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 17/256 (6%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L+G V LVTG + G+GKA S ++++ LG + K ++VT+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E ++ + D FG +D+ VN AGI+ + + +++ I+ N F
Sbjct: 70 PESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKE------EEWSDIMETNLTSIFR 123
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+++ + + + + +G IIN S+ G +GQ ++A+K+G++G T MAR++A
Sbjct: 124 LSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVA 177
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
G+ VNT+APG +T + LN++ R +PA RLG P E A V + + +P
Sbjct: 178 SRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 235
Query: 239 LINGEVIRIDGALRMI 254
I GE + ++G + MI
Sbjct: 236 YITGETLHVNGGMYMI 251
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 17/256 (6%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L+G V LVTG + G+GKA S ++++ LG + K ++VT+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E ++ + D FG +D+ VN A I+ + + +++ I+ N F
Sbjct: 70 PESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKE------EEWSDIMETNLTSIFR 123
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+++ + + + + +G IIN S+ G +GQ Y+A+K+G++G T MAR++A
Sbjct: 124 LSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVA 177
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
G+ VNT+APG +T + LN++ R +PA RLG P E A V + + +P
Sbjct: 178 SRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 235
Query: 239 LINGEVIRIDGALRMI 254
I GE + ++G + MI
Sbjct: 236 YITGETLHVNGGMYMI 251
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 17/256 (6%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L+G V LVTG + G+GKA S ++++ LG + K ++VT+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E ++ + D FG +D+ VN A I+ + + +++ I+ N F
Sbjct: 70 PESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKE------EEWSDIMETNLTSIFR 123
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+++ + + + + +G IIN S+ G +GQ Y+A+K+G++G T MAR++A
Sbjct: 124 LSKAVLRGMMKKR------QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVA 177
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
G+ VNT+APG +T + LN++ R +PA RLG P E A V + + +P
Sbjct: 178 SRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 235
Query: 239 LINGEVIRIDGALRMI 254
I GE + ++G + MI
Sbjct: 236 YITGETLHVNGGMYMI 251
>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2PNF|B Chain B, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2P68|A Chain A, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
pdb|2P68|B Chain B, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
Length = 248
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 130/256 (50%), Gaps = 19/256 (7%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL----GPDVKFAPV 57
L+G V LVTG G+G+A + ++VA+E+ G +
Sbjct: 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
++ SEE + KA + +D+ VN AGI+ K+F SL D++ +L VN
Sbjct: 65 NLLSEESINKAFEEIYNLVDGIDILVNNAGITRD-KLF-----LRMSLLDWEEVLKVNLT 118
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
GTF V + S + + + + G I+N +S+ + G GQV YS +K+G++G T +A
Sbjct: 119 GTFLVTQNSLRKMIKQRW------GRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLA 172
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
++LA + VN +APG +T + ++L+E+++ IP R G P+E A +V + +
Sbjct: 173 KELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLG-RFGSPEEVANVVLFLCSE 231
Query: 238 --PLINGEVIRIDGAL 251
I GEVI ++G +
Sbjct: 232 LASYITGEVIHVNGGM 247
>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|B Chain B, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|C Chain C, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|D Chain D, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
Length = 264
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 27/266 (10%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELG-PDVKFAP---- 56
L+ + LVTG SG+G+A CDL + + + LG P K P
Sbjct: 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64
Query: 57 -----VDVTSEEDVQKAVLLCKDSFGKL-DVNVNCAGISCAFKIFNYNKGTVH-SLDDFK 109
DV+ + + + F + V V+CAGI+ ++ +H S DD+
Sbjct: 65 HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT-------QDEFLLHMSEDDWD 117
Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGI 169
+++ VN GTF V + +AQ + N G RG IIN +SI G GQ Y+ASK+G+
Sbjct: 118 KVIAVNLKGTFLVTQAAAQALVSN-----GCRGSIINISSIVGKVGNVGQTNYAASKAGV 172
Query: 170 VGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQ 229
+G+T AR+L GIR N++ PG TP+ + +KV + + IP LG P++ A
Sbjct: 173 IGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGH-LGDPEDVAD 231
Query: 230 LVQSIITNP--LINGEVIRIDGALRM 253
+V + + I G + + G L M
Sbjct: 232 VVAFLASEDSGYITGTSVEVTGGLFM 257
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 17/256 (6%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L+G V LVTG + G+GKA S ++++ LG + K ++VT+
Sbjct: 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALNVTN 66
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E ++ + D FG +D+ VN AGI+ + + +++ I N F
Sbjct: 67 PESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKE------EEWSDIXETNLTSIF- 119
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
RLS ++ +G IIN S+ G +GQ Y+A+K+G++G T AR++A
Sbjct: 120 --RLSKAVLRGXXKKR---QGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVA 174
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--- 238
G+ VNT+APG +T LN++ R +PA RLG P E A V + + +P
Sbjct: 175 SRGVTVNTVAPGFIETDXTKALNDEQRTATLAQVPAG-RLGDPREIASAV-AFLASPEAA 232
Query: 239 LINGEVIRIDGALRMI 254
I GE + ++G I
Sbjct: 233 YITGETLHVNGGXYXI 248
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 19/259 (7%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLC----DLPTSEGESVAKELGPDVKFAP 56
MLKG V LVTG + G+G+A + + +E K+LG D
Sbjct: 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR 60
Query: 57 VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
DV + EDV V D FG++D+ VN AG++ + + +++ ++ N
Sbjct: 61 ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKE------EEWDTVINTNL 114
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
G F + ++ + + G I+N AS+ G GQ Y A+K+G++G+T
Sbjct: 115 KGVFLCTKAVSRFMMRQR------HGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTS 168
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
A++LA I VN IAPG T + +L+E ++ + + IPA Q G + A V +
Sbjct: 169 AKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQ-FGEAQDIANAVTFFAS 227
Query: 237 N--PLINGEVIRIDGALRM 253
+ I G+ + +DG + M
Sbjct: 228 DQSKYITGQTLNVDGGMVM 246
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 17/253 (6%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G ++TGGA GLG L D+ EG + A+ELG ++ +DVT
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
EED Q+ V ++ FG +D VN AGIS + S++ F++++ +N G F
Sbjct: 63 EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL------ETESVERFRKVVEINLTGVFI 116
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+ + +D G I+N +S A G + +Y ASK G+ G++ A +L
Sbjct: 117 GMKTVIPAM------KDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG 170
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ-RLGHPDEFAQLVQSII--TNP 238
IRVN++ PG+ TP+ + +R P R+G P E A V ++ T+
Sbjct: 171 TDRIRVNSVHPGMTYTPMTA--ETGIRQGEGNYPNTPMGRVGEPGEIAGAVVKLLSDTSS 228
Query: 239 LINGEVIRIDGAL 251
+ G + +DG
Sbjct: 229 YVTGAELAVDGGW 241
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 19/199 (9%)
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
DV+ E +V+ + +G+LDV VN AGI+ + + DD++ +L +N
Sbjct: 86 DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKR------DDWQSVLDLNLG 139
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
G F +R +A+++ + + G IIN AS+ G GQ YSA+K+G++G+T +A
Sbjct: 140 GVFLCSRAAAKIMLKQR------SGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVA 193
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
++LA GI VN +APG T M +E L IP R G E A +V+ + +
Sbjct: 194 KELASRGITVNAVAPGFIAT---DMTSELAAEKLLEVIPL-GRYGEAAEVAGVVRFLAAD 249
Query: 238 P---LINGEVIRIDGALRM 253
P I G+VI IDG L M
Sbjct: 250 PAAAYITGQVINIDGGLVM 268
>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|B Chain B, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|C Chain C, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|D Chain D, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|E Chain E, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|F Chain F, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|G Chain G, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|H Chain H, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
Length = 245
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 121/252 (48%), Gaps = 22/252 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPV--DV 59
LK L+TG A G+G+AT CD+ E +E V PV DV
Sbjct: 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE----EGPLREAAEAVGAHPVVXDV 58
Query: 60 TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
V++ G+LD V+ AGI+ F++ L+D++ +L VN G+
Sbjct: 59 ADPASVERGFAEALAHLGRLDGVVHYAGITR--DNFHWKX----PLEDWELVLRVNLTGS 112
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
F VA+ +++ E G I+ TAS Y G GQ Y+AS +G+VG+T +A +
Sbjct: 113 FLVAKAASEAXREKN------PGSIVLTAS-RVYLGNLGQANYAASXAGVVGLTRTLALE 165
Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-- 237
L GIRVNT+APG +T + + EKVR + P R G P E A ++++
Sbjct: 166 LGRWGIRVNTLAPGFIETRXTAKVPEKVREKAIAATPL-GRAGKPLEVAYAALFLLSDES 224
Query: 238 PLINGEVIRIDG 249
I G+V+ +DG
Sbjct: 225 SFITGQVLFVDG 236
>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l
pdb|2NTN|B Chain B, Crystal Structure Of Maba-c60v/g139a/s144l
Length = 267
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 15/199 (7%)
Query: 57 VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
VDVT + V +A ++ G ++V V+ AG+S + + + F++++ N
Sbjct: 80 VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTE------EKFEKVINANL 133
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
G F VA+ +++ + NK G +I AS++ G Q Y+ASK+G++GM +
Sbjct: 134 TGAFRVAQRASRSMQRNKF------GRMIFIASVSGLWGIGNQANYAASKAGVIGMARSI 187
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
AR+L+ A + N +APG DT + L+E+++ + IPA +R+G P E A +V + +
Sbjct: 188 ARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA-KRVGTPAEVAGVVSFLAS 246
Query: 237 N--PLINGEVIRIDGALRM 253
I+G VI +DG + M
Sbjct: 247 EDASYISGAVIPVDGGMGM 265
>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
pdb|1VL8|B Chain B, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
Length = 267
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 24/260 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL----GPDVKFAPV 57
L+G V LVTGG+ GLG + E A++L G +
Sbjct: 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
DV++ E+V+K + K+ FGKLD VN AGI+ + LD+F++++ VN
Sbjct: 79 DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN------RRHPAEEFPLDEFRQVIEVNLF 132
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV-AYSASKSGIVGMTLPM 176
GT+ V R + L+ E+ IIN S+ E + AY+ASK G+ +T +
Sbjct: 133 GTYYVCREAFSLLRESD------NPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKAL 186
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSML---NEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
A++ GIRVN IAPG + T + + EK+ +++ + IP R G P++ +
Sbjct: 187 AKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKL-DYMLKRIPL-GRTGVPEDLKGVAVF 244
Query: 234 IITN--PLINGEVIRIDGAL 251
+ + + G++I +DG
Sbjct: 245 LASEEAKYVTGQIIFVDGGW 264
>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|B Chain B, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|C Chain C, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|D Chain D, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
Length = 249
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 15/255 (5%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G LVTG GLG+A L + + +A ELG + P +++
Sbjct: 8 LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSD 67
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E V+ ++ G +D+ VN AGI+ S +D+ +L VN FN
Sbjct: 68 REAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRM------SDEDWDAVLTVNLTSVFN 121
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+ R +L H +G IIN SI G GQ Y ASK+G++G + +A+++A
Sbjct: 122 LTR---ELTHPMMRRRNGR---IINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIA 175
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
+ VN IAPG ++ + LNEK ++ + +IP +R+G + A V + ++
Sbjct: 176 SRNVTVNCIAPGFIESAMTGKLNEKQKDAIMGNIPM-KRMGVGADIAAAVVYLASDEAAY 234
Query: 240 INGEVIRIDGALRMI 254
+ G+ + ++G + MI
Sbjct: 235 VTGQTLHVNGGMAMI 249
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 15/255 (5%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G LVTG GLG+A L + + +A ELG + P +++
Sbjct: 5 LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSD 64
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E V+ ++ G +D+ VN AGI+ S +D+ +L VN FN
Sbjct: 65 REAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRM------SDEDWDAVLTVNLTSVFN 118
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+ R +L H +G IIN SI G GQ Y ASK+G++G + +A+++A
Sbjct: 119 LTR---ELTHPMMRRRNGR---IINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIA 172
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
+ VN IAPG ++ + LNEK ++ + +IP +R+G + A V + ++
Sbjct: 173 SRNVTVNCIAPGFIESAMTGKLNEKQKDAIMGNIPM-KRMGVGADIAAAVVYLASDEAAY 231
Query: 240 INGEVIRIDGALRMI 254
+ G+ + ++G + MI
Sbjct: 232 VTGQTLHVNGGMAMI 246
>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|B Chain B, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|C Chain C, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|D Chain D, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
Length = 256
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 125/257 (48%), Gaps = 26/257 (10%)
Query: 3 KGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSE 62
KGV LVTGGA G+G+A LCDL EG+ VA+ +G F VD+ E
Sbjct: 7 KGV--LVTGGARGIGRAIAQAFAREGALVALCDL-RPEGKEVAEAIGG--AFFQVDLEDE 61
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
+ + V + G++DV VN A I+ L +++R+L VN ++
Sbjct: 62 RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVR------LPEWRRVLEVNLTAPMHL 115
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
+ L+A+ ++ + G G I+N AS+ + AY+ASK G+V +T +A DLA
Sbjct: 116 SALAAR-----EMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAP 169
Query: 183 AGIRVNTIAPGLFDTP------LLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
IRVN +APG T LS E+ R + A +RLG P+E A+ V + +
Sbjct: 170 LRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDW-EDLHALRRLGKPEEVAEAVLFLAS 228
Query: 237 N--PLINGEVIRIDGAL 251
I G ++ +DG +
Sbjct: 229 EKASFITGAILPVDGGM 245
>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZM|B Chain B, Maba From Mycobacterium Tuberculosis
pdb|1UZN|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZN|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 106/199 (53%), Gaps = 15/199 (7%)
Query: 57 VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
VDVT + V +A ++ G ++V V+ AG+S + + + F++++ N
Sbjct: 60 VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTE------EKFEKVINANL 113
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
G F VA+ +++ + NK G +I S++ G Q Y+ASK+G++GM +
Sbjct: 114 TGAFRVAQRASRSMQRNKF------GRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
AR+L+ A + N +APG DT + L+E+++ + IPA +R+G P E A +V + +
Sbjct: 168 ARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA-KRVGTPAEVAGVVSFLAS 226
Query: 237 N--PLINGEVIRIDGALRM 253
I+G VI +DG + M
Sbjct: 227 EDASYISGAVIPVDGGMGM 245
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 14/252 (5%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G ++TGGA GLG L D+ EG + A+ELG ++ +DVT
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
EED Q+ V ++ FG +D VN AGIS + S++ F++++ +N G F
Sbjct: 63 EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL------ETESVERFRKVVEINLTGVFI 116
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+ + +D G I+N +S A G + +Y ASK G+ G++ A +L
Sbjct: 117 GMKTVIPAM------KDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG 170
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII--TNPL 239
IRVN++ PG+ TP+ + + + P + P E A V ++ T+
Sbjct: 171 TDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSY 230
Query: 240 INGEVIRIDGAL 251
+ G + +DG
Sbjct: 231 VTGAELAVDGGW 242
>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZL|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 15/198 (7%)
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
DVT + V +A ++ G ++V V+ AG+S + + + F++++ N
Sbjct: 61 DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTE------EKFEKVINANLT 114
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
G F VA+ +++ + NK G +I S++ G Q Y+ASK+G++GM +A
Sbjct: 115 GAFRVAQRASRSMQRNKF------GRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIA 168
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
R+L+ A + N +APG DT + L+E+++ + IPA +R+G P E A +V + +
Sbjct: 169 RELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA-KRVGTPAEVAGVVSFLASE 227
Query: 238 --PLINGEVIRIDGALRM 253
I+G VI +DG + M
Sbjct: 228 DASYISGAVIPVDGGMGM 245
>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|B Chain B, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|C Chain C, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|D Chain D, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|E Chain E, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|F Chain F, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|G Chain G, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|H Chain H, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
Length = 262
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 93/197 (47%), Gaps = 18/197 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL---PTSEGESVAKELGPDVKFAPVD 58
G V LVTG +G AT L D+ + E+ +E G + + D
Sbjct: 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFK-IFNYNKGTVHSLDDFKRILLVNTV 117
VTSEE V V FGK+D N AG AF + +Y DDF R+L +N
Sbjct: 65 VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPS------DDFARVLTINVT 118
Query: 118 GTFNVAR-LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
G F+V + +S Q+I +N G I+NTAS+A +G AY SK I+ +T
Sbjct: 119 GAFHVLKAVSRQMITQN-------YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETA 171
Query: 177 ARDLAGAGIRVNTIAPG 193
A DLA IRVN I+PG
Sbjct: 172 ALDLAPYNIRVNAISPG 188
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 18/251 (7%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
V LVTG G+G+ +SV E+ G + DV+ +
Sbjct: 46 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK 105
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
E++ + + +D+ VN AGI+ +F K D+++ +L N F +
Sbjct: 106 EEISEVINKILTEHKNVDILVNNAGIT-RDNLFLRMKN-----DEWEDVLRTNLNSLFYI 159
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
+ ++ + N+ G IIN +SI G GQ YS+SK+G++G T +A++LA
Sbjct: 160 TQPISKRMINNRY------GRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELAS 213
Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--LI 240
I VN IAPG + + ++E+++ + +IPA R+G P+E A L + ++ I
Sbjct: 214 RNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAG-RMGTPEEVANLACFLSSDKSGYI 272
Query: 241 NGEVIRIDGAL 251
NG V IDG L
Sbjct: 273 NGRVFVIDGGL 283
>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
Length = 277
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 111/253 (43%), Gaps = 23/253 (9%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
V +VTGG SG+G+AT + D+ VA E+G VDV+S +D
Sbjct: 29 VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDA 88
Query: 66 QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
+ V +G++DV VN AG + + T + RI VN G F ++
Sbjct: 89 ESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEET------WDRIXSVNVKGIFLCSKY 142
Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
+ N G IINT S A + + AY ASK I +T A D A GI
Sbjct: 143 VIPVXRRNG------GGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGI 196
Query: 186 RVNTIAPGLFDTPLLSMLNEKVR-------NFLARSIPAPQRLGHPDEFAQ--LVQSIIT 236
RVN +APG D+P + + + + +F AR++ R G +E A+ L +
Sbjct: 197 RVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV--XDRXGTAEEIAEAXLFLASDR 254
Query: 237 NPLINGEVIRIDG 249
+ G ++ +DG
Sbjct: 255 SRFATGSILTVDG 267
>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase
pdb|1IY8|B Chain B, Crystal Structure Of Levodione Reductase
pdb|1IY8|C Chain C, Crystal Structure Of Levodione Reductase
pdb|1IY8|D Chain D, Crystal Structure Of Levodione Reductase
pdb|1IY8|E Chain E, Crystal Structure Of Levodione Reductase
pdb|1IY8|F Chain F, Crystal Structure Of Levodione Reductase
pdb|1IY8|G Chain G, Crystal Structure Of Levodione Reductase
pdb|1IY8|H Chain H, Crystal Structure Of Levodione Reductase
Length = 267
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 118/259 (45%), Gaps = 31/259 (11%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAK----ELGPDVKF--APVDVTS 61
L+TGG SGLG+AT L D+ +SEG +K E PD + DV+
Sbjct: 17 LITGGGSGLGRATAVRLAAEGAKLSLVDV-SSEGLEASKAAVLETAPDAEVLTTVADVSD 75
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E V+ V + FG++D N AGI N + +F +++ +N G F
Sbjct: 76 EAQVEAYVTATTERFGRIDGFFNNAGIEG-----KQNPTESFTAAEFDKVVSINLRGVFL 130
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+++ E G+++NTAS+ G Q Y+A+K G+VG+T A +
Sbjct: 131 GLEKVLKIMREQG------SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYG 184
Query: 182 GAGIRVNTIAPGLFDTPLL--SMLN-------EKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
GIR+N IAPG TP++ SM + F+ + +R G E A +V
Sbjct: 185 RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFI--QVNPSKRYGEAPEIAAVVA 242
Query: 233 SIITN--PLINGEVIRIDG 249
++++ +N V+ IDG
Sbjct: 243 FLLSDDASYVNATVVPIDG 261
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 120/255 (47%), Gaps = 15/255 (5%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
+G + LVTG + G+G+A + ++++ LG + K ++VT
Sbjct: 3 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
++ + + FG++D+ VN AGI+ + +++ I+ N F
Sbjct: 63 PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKD------EEWNDIIETNLSSVFR 116
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+++ + + + + G II S+ G GQ Y+A+K+G++G + +AR++A
Sbjct: 117 LSKAVMRAMMKKR------HGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVA 170
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
GI VN +APG +T + L++ R + +PA RLG E A V + ++
Sbjct: 171 SRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAG-RLGGAQEIANAVAFLASDEAAY 229
Query: 240 INGEVIRIDGALRMI 254
I GE + ++G + M+
Sbjct: 230 ITGETLHVNGGMYMV 244
>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFF|B Chain B, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFQ|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 113/235 (48%), Gaps = 28/235 (11%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G V LV+GGA G+G + D+ EG+++A EL ++ +DVT
Sbjct: 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQ 64
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKRILLVNTVGT 119
+ AV +FG L V VN AGI N GT+ ++L +++RIL VN G
Sbjct: 65 PAQWKAAVDTAVTAFGGLHVLVNNAGI--------LNIGTIEDYALTEWQRILDVNLTGV 116
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA---YSASKSGIVGMTLPM 176
F R + + E RG IIN +SI EG +G VA Y+A+K + G+T
Sbjct: 117 FLGIRAVVKPMKEAG------RGSIINISSI---EGLAGTVACHGYTATKFAVRGLTKST 167
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
A +L +GIRVN+I PGL TP+ + E + A R P E + LV
Sbjct: 168 ALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQ------TALGRAAEPVEVSNLV 216
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
Length = 244
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 120/255 (47%), Gaps = 15/255 (5%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
+G + LVTG + G+G+A + ++++ LG + K ++VT
Sbjct: 3 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
++ + + FG++D+ VN AGI+ + +++ I+ N F
Sbjct: 63 PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKD------EEWNDIIETNLSSVFR 116
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+++ + + + + G II S+ G GQ ++A+K+G++G + +AR++A
Sbjct: 117 LSKAVMRAMMKKR------HGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVA 170
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
GI VN +APG +T + L++ R + +PA RLG E A V + ++
Sbjct: 171 SRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAG-RLGGAQEIANAVAFLASDEAAY 229
Query: 240 INGEVIRIDGALRMI 254
I GE + ++G + M+
Sbjct: 230 ITGETLHVNGGMYMV 244
>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|B Chain B, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|C Chain C, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|D Chain D, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
Length = 250
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 22/259 (8%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKE----LGPDVKFAPVDVTS 61
V +VTG +SG G A DL E A+ V DV
Sbjct: 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVAD 63
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHS--LDDFKRILLVNTVGT 119
E DV A+ + FG +DV VN AGI+ N G +H+ ++ F +++ VN G
Sbjct: 64 EGDVNAAIAATMEQFGAIDVLVNNAGITG-----NSEAGVLHTTPVEQFDKVMAVNVRGI 118
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
F L + + + L + GVI+N AS+A+ G+ AY+ SK ++ +T +A D
Sbjct: 119 F----LGCRAVLPHMLLQGA--GVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVD 172
Query: 180 LAGAGIRVNTIAPGLFDTPL--LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
AG+GIR N + PG+ +TP+ + ++R+ + IP + +G + A V +
Sbjct: 173 YAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP-QKEIGTAAQVADAVMFLAGE 231
Query: 238 --PLINGEVIRIDGALRMI 254
+NG + +DGA I
Sbjct: 232 DATYVNGAALVMDGAYTAI 250
>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein
Reductase From Brassica Napus Complexed With Nadp+
pdb|2CDH|G Chain G, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|H Chain H, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|I Chain I, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|J Chain J, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|K Chain K, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|L Chain L, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 244
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 22/252 (8%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEG-ESVAKEL----GPDVKFAPVDVTSE 62
+VTG + G+GKA + +++ E V+K++ G + F DV+ E
Sbjct: 5 VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGG-DVSKE 63
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
DV+ + D++G +DV VN AGI+ + K + ++ +N G F
Sbjct: 64 ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKK------SQWDEVIDLNLTGVFLC 117
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
+ + +++ + + +G IIN AS+ G GQ Y+A+K+G++G + AR+ A
Sbjct: 118 TQAATKIMMKKR------KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGAS 171
Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP---L 239
I VN + PG + + + L E + + +IP R G P+ A LV+ + +P
Sbjct: 172 RNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLG-RTGQPENVAGLVEFLALSPAASY 230
Query: 240 INGEVIRIDGAL 251
I G+ IDG +
Sbjct: 231 ITGQAFTIDGGI 242
>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 256
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 15/210 (7%)
Query: 46 KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
K LG D + +V + ++A K G++DV VN AGI+ + + K T
Sbjct: 59 KALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT---RDVVFRKMT---R 112
Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
+D++ ++ N FNV + Q+I + + E G G IIN +S+ +GQ GQ YS +
Sbjct: 113 EDWQAVIDTNLTSLFNVTK---QVI--DGMVERGW-GRIINISSVNGQKGQFGQTNYSTA 166
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPD 225
K+GI G T+ +A+++A G+ VNT++PG T ++ + V + +IP +RLG PD
Sbjct: 167 KAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPV-RRLGSPD 225
Query: 226 EFAQLVQSIITNP--LINGEVIRIDGALRM 253
E +V + + G ++G L M
Sbjct: 226 EIGSIVAWLASEESGFSTGADFSLNGGLHM 255
>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G V LV+GGA G G + D+ EG++ A EL ++ +DVT
Sbjct: 5 LTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAELADAARYVHLDVTQ 64
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV--HSLDDFKRILLVNTVGT 119
+ AV +FG L V VN AGI N GT+ ++L +++RIL VN G
Sbjct: 65 PAQWKAAVDTAVTAFGGLHVLVNNAGI--------LNIGTIEDYALTEWQRILDVNLTGV 116
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA---YSASKSGIVGMTLPM 176
F R K ++ RG IIN +SI EG +G VA Y+A+K + G+T
Sbjct: 117 FLGIRAVV------KPXKEAGRGSIINISSI---EGLAGTVACHGYTATKFAVRGLTKST 167
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
A +L +GIRVN+I PGL TP + E + A R P E + LV
Sbjct: 168 ALELGPSGIRVNSIHPGLVKTPXTDWVPEDIFQ------TALGRAAEPVEVSNLV 216
>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|B Chain B, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|C Chain C, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|D Chain D, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 269
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 22/256 (8%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA----KELGPDVKFAPVDVTS 61
V VTGG GLG A + ++ S ++ G D K VDV
Sbjct: 27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD 86
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E ++ FGK+DV +N AGI+ KG D+ ++ + FN
Sbjct: 87 FESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKG------DWDAVMRTDLDAMFN 140
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
V + + E + G I+N S+ G GQ Y+++K+GI G T +A + A
Sbjct: 141 VTKQFIAGMVERRF------GRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETA 194
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA--PQRLGHPDEFAQLVQSIITNP- 238
GI VNT++PG T ++ + + V A+ +P RLG PDE A L+ + ++
Sbjct: 195 KRGITVNTVSPGYLATAMVEAVPQDV--LEAKILPQIPVGRLGRPDEVAALIAFLCSDDA 252
Query: 239 -LINGEVIRIDGALRM 253
+ G + I+G + M
Sbjct: 253 GFVTGADLAINGGMHM 268
>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181
pdb|3AWD|B Chain B, Crystal Structure Of Gox2181
pdb|3AWD|C Chain C, Crystal Structure Of Gox2181
pdb|3AWD|D Chain D, Crystal Structure Of Gox2181
Length = 260
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
V +VTGGA +G A + DL + ++L G DV +DVT+
Sbjct: 15 VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT 74
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
E VQ AV + G++D+ V CAGI C ++ K + + + + +N G F
Sbjct: 75 ESVQNAVRSVHEQEGRVDILVACAGI-CISEV----KAEDMTDGQWLKQVDINLNGMFRS 129
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAY--EGQSGQVAYSASKSGIVGMTLPMARDL 180
+ +++ E K +GVI+ S++ Q AY+ASK+G+ +A +
Sbjct: 130 CQAVGRIMLEQK------QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEW 183
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ-RLGHPDEFAQLVQSIITN-- 237
A GIR N +AP +T L EK + A P R+G PDE A +VQ + ++
Sbjct: 184 APHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAA 243
Query: 238 PLINGEVIRID 248
L+ G ++ +D
Sbjct: 244 SLMTGAIVNVD 254
>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
pdb|2NM0|B Chain B, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
Length = 253
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
D+T E V++A +++ G ++V + AG++ + ++ +DF ++ N
Sbjct: 67 DITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSE------EDFTSVVETNLT 120
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
GTF V + + + + K +G ++ +S+ G +GQ Y+ASK+G+VG +A
Sbjct: 121 GTFRVVKRANRAMLRAK------KGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLA 174
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
R+L I N +APG DT + +L ++ R + +P R P+E A V+ + ++
Sbjct: 175 RELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPL-GRYARPEEIAATVRFLASD 233
Query: 238 --PLINGEVIRIDGALRM 253
I G VI +DG L M
Sbjct: 234 DASYITGAVIPVDGGLGM 251
>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|B Chain B, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|C Chain C, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|D Chain D, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|E Chain E, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|F Chain F, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|G Chain G, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|H Chain H, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
Length = 291
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLP----TSEGESVAKELGPDVKFAPV 57
LKG L+TGG SG+G+A + L +E + ++ G P
Sbjct: 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
D++ E+ + V G L++ VN + Y + + ++ +N
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEY-----ITAEQLEKTFRINIF 159
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
F+V + A L H + + VIINTASI AYEG + YSA+K IV T ++
Sbjct: 160 SYFHVTK--AALSHLKQGD------VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLS 211
Query: 178 RDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
+ L GIRVN +APG TPL+ S +EK + ++P QR G P E A + +
Sbjct: 212 QSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPM-QRPGQPYELAPAYVYLAS 270
Query: 237 --NPLINGEVIRIDGAL 251
+ + G++I ++G +
Sbjct: 271 SDSSYVTGQMIHVNGGV 287
>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
pdb|2PH3|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
Length = 245
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 74 DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHEN 133
+ G LD VN AGI+ + +D++ +L N F R + +L+ +
Sbjct: 76 EVLGGLDTLVNNAGITRDTLLVRMKD------EDWEAVLEANLSAVFRTTREAVKLMMKA 129
Query: 134 KLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
+ G I+N S+ G GQ Y ASK+G++G T +A++ A GI VN +APG
Sbjct: 130 RF------GRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPG 183
Query: 194 LFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGAL 251
+T + L ++V+ + IPA R G P+E A+ V +++ I G+ + +DG L
Sbjct: 184 FIETEMTERLPQEVKEAYLKQIPA-GRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 21/253 (8%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE-GESVAKEL---GPDVKFAPVDVTSEE 63
LVTG + G+G++ + + E E+V +E+ G D +V +
Sbjct: 14 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADAD 73
Query: 64 DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN-V 122
+V+ + FG LDV VN AGI+ + + DD ++ N G FN +
Sbjct: 74 EVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKE---QEWDD---VIDTNLKGVFNCI 127
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
+ + Q++ + G IIN +S+ G GQ Y A+K+G++G+T AR+LA
Sbjct: 128 QKATPQMLRQRS-------GAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELAS 180
Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLI 240
GI VN +APG + + L+++++ + IP R G + A V + ++ I
Sbjct: 181 RGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLA-RFGQDTDIANTVAFLASDKAKYI 239
Query: 241 NGEVIRIDGALRM 253
G+ I ++G + M
Sbjct: 240 TGQTIHVNGGMYM 252
>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|B Chain B, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|C Chain C, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|D Chain D, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|E Chain E, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|F Chain F, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|G Chain G, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|H Chain H, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
Length = 291
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 21/257 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLP----TSEGESVAKELGPDVKFAPV 57
LKG L+TGG SG+G+A + L +E + ++ G P
Sbjct: 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
D++ E+ + V G L++ VN + Y + + ++ +N
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEY-----ITAEQLEKTFRINIF 159
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
F+V + A L H + + VIINTASI AYEG + YSA+K IV T ++
Sbjct: 160 SYFHVTK--AALSHLKQGD------VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLS 211
Query: 178 RDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
+ L GIRVN +APG TPL+ S +EK + ++P QR G P E A + +
Sbjct: 212 QSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPX-QRPGQPYELAPAYVYLAS 270
Query: 237 --NPLINGEVIRIDGAL 251
+ + G+ I ++G +
Sbjct: 271 SDSSYVTGQXIHVNGGV 287
>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|C Chain C, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|D Chain D, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
Length = 266
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 15/255 (5%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G LVTG G+G+A L + + +A +LG DV +++
Sbjct: 25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSD 84
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
+ +++ + + +D+ VN AGI+ D+ +L VN
Sbjct: 85 RKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQD------QDWDDVLAVNLTAAST 138
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+ R +LIH G IIN SI G GQ Y A+K+G++G + +A+++A
Sbjct: 139 LTR---ELIHSMMRRR---YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIA 192
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDE--FAQLVQSIITNPL 239
I VN IAPG + + LNEK + + IP +R+G +E FA + +
Sbjct: 193 SRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPM-KRMGIGEEIAFATVYLASDEAAY 251
Query: 240 INGEVIRIDGALRMI 254
+ G+ + I+G + MI
Sbjct: 252 LTGQTLHINGGMAMI 266
>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4B79|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery
Length = 242
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 113/248 (45%), Gaps = 31/248 (12%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
LVTGG+SG+G A L + + V P ++ +D+T + +Q+
Sbjct: 15 LVTGGSSGIGAAIAMQFAELGAEVVALGL---DADGVHAPRHPRIRREELDITDSQRLQR 71
Query: 68 AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
++ +LDV VN AGIS + L F+R+L +N ++L+
Sbjct: 72 LF----EALPRLDVLVNNAGIS--------RDREEYDLATFERVLRLNLSAAMLASQLAR 119
Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRV 187
L+ + G I+N AS+ + G + + AYSASK IV +T +A + A IRV
Sbjct: 120 PLLAQRG-------GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRV 172
Query: 188 NTIAPGLFDTPLLSMLN---EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP---LIN 241
N IAPG DTPL + L E R + R+ A R G E A + + P +
Sbjct: 173 NAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA--RWGEAPEVAS-AAAFLCGPGASFVT 229
Query: 242 GEVIRIDG 249
G V+ +DG
Sbjct: 230 GAVLAVDG 237
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 120/258 (46%), Gaps = 25/258 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G L+TG +SG+G A + + +S+ L + ++ +
Sbjct: 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLAN 71
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISC---AFKIFNYNKGTVHSLDDFKRILLVNTVG 118
+E+ L+ K S LD+ V AGI+ A ++ + DF +++ +N
Sbjct: 72 KEECSN--LISKTS--NLDILVCNAGITSDTLAIRMKD---------QDFDKVIDINLKA 118
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
F + R + + + + + G IIN +SI G GQ Y ASK+G++GMT ++
Sbjct: 119 NFILNREAIKKMIQKRY------GRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSY 172
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN- 237
++A GI VN +APG + + LNEK R + + IP G P++ A V + +N
Sbjct: 173 EVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGT-YGIPEDVAYAVAFLASNN 231
Query: 238 -PLINGEVIRIDGALRMI 254
I G+ + ++G + M+
Sbjct: 232 ASYITGQTLHVNGGMLMV 249
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 26/257 (10%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA---KELGPDVKFAPVDVTSE 62
V +VTG + G+G+A + E + K+ G + + A ++V
Sbjct: 30 VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDA 89
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGIS---CAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
V V FG L+V VN AGI+ A ++ + D++ ++ N
Sbjct: 90 TAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKD---------DEWDAVIDTNLKAV 140
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
F ++R + + + + G I+N S+ G GQV Y+A+K+G+ GMT +AR+
Sbjct: 141 FRLSRAVLRPMMKAR------GGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALARE 194
Query: 180 LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP- 238
+ GI VN +APG DT + L ++ + L IP RLG P++ A V + + +P
Sbjct: 195 IGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLG-RLGSPEDIAHAV-AFLASPQ 252
Query: 239 --LINGEVIRIDGALRM 253
I G + ++G + M
Sbjct: 253 AGYITGTTLHVNGGMFM 269
>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|B Chain B, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|C Chain C, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|D Chain D, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
Length = 253
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 103/236 (43%), Gaps = 19/236 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L+G V LVTGGASG+G D+ + G+ +A ELG F DV+S
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSS 63
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E D + + G L+V VN AGI + L+DF R+L +NT F
Sbjct: 64 EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDM------ETGRLEDFSRLLKINTESVFI 117
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL- 180
+ + E G IIN AS++++ YSASK+ + +T A
Sbjct: 118 GCQQGIAAMKETG-------GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCR 170
Query: 181 -AGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFLARSIPAPQRLGH---PDEFAQLV 231
G IRVN+I P TP++ + L + V + P R G P+ AQLV
Sbjct: 171 KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLV 226
>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
Length = 261
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 123/258 (47%), Gaps = 22/258 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L+G V L+TG SG G+ + D + E VA E+G D++
Sbjct: 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISK 66
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E DV AV FGK+D+ VN AGI + ++F RI+ VN G +
Sbjct: 67 EADVDAAVEAALSKFGKVDILVNNAGIG-----HKPQNAELVEPEEFDRIVGVNVRGVY- 120
Query: 122 VARLSAQLIHENKLNEDGLRG---VIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
++++LI K E+G +G VI+N AS A + Y+A+K +V +T +A
Sbjct: 121 --LMTSKLIPHFK--ENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAI 176
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML----NEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
+LA A IRV + P +TPLL+ +E++R SIP RL PD+ A+ +
Sbjct: 177 ELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPM-GRLLKPDDLAE-AAAF 234
Query: 235 ITNP---LINGEVIRIDG 249
+ +P +I G + +DG
Sbjct: 235 LCSPQASMITGVALDVDG 252
>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZJZ|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK0|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZK1|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK2|A Chain A, Orthorhombic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|A Chain A, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|B Chain B, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|C Chain C, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|D Chain D, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|E Chain E, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|F Chain F, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|G Chain G, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|H Chain H, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
Length = 251
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELG-PD-VKFAPVDV 59
L G V ++TGG G+G A + D + GE AK +G PD ++F D
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHDS 63
Query: 60 TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD-DFKRILLVNTVG 118
+ E+ K + +FG + VN AGI+ NK + +++++L VN G
Sbjct: 64 SDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-------NKSVEETTTAEWRKLLAVNLDG 116
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
F RL Q ++ GL IIN +SI + G AY+ASK + M+ A
Sbjct: 117 VFFGTRLGIQ-----RMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAAL 171
Query: 179 D--LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
D L +RVNT+ PG TPL+ L R+ +G P++ A + + +
Sbjct: 172 DCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS 231
Query: 237 N--PLINGEVIRIDG 249
N G +DG
Sbjct: 232 NESKFATGSEFVVDG 246
>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|D Chain D, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|C Chain C, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|F Chain F, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|E Chain E, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|H Chain H, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|G Chain G, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 271
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 113/254 (44%), Gaps = 16/254 (6%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L+ V ++TG G+G T L DLP ++ A +G VD+T+
Sbjct: 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTN 68
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E V+ + D+FG+LD+ N A S + + TV DD VN GT
Sbjct: 69 EVSVRALIDFTIDTFGRLDIVDNNAAHSDPADML-VTQMTVDVWDD---TFTVNARGTML 124
Query: 122 VARLS-AQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
+ + + +LI G I+N +S A+ AY+ +K+ I +T +A
Sbjct: 125 MCKYAIPRLISAGG-------GAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQY 177
Query: 181 AGAGIRVNTIAPGLFDTPLLSM-LNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN-- 237
G+R N IAPGL TP L + L + + + A A R+G P E A+LV + ++
Sbjct: 178 GRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA-GRIGEPHEIAELVCFLASDRA 236
Query: 238 PLINGEVIRIDGAL 251
I G+VI D L
Sbjct: 237 AFITGQVIAADSGL 250
>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
pdb|2A4K|B Chain B, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
Length = 263
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 18/250 (7%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G LVTG ASG+G+A D L + DV+
Sbjct: 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSD 63
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
+ V+ + FG+L + AG++ + +N L+ ++++L VN G+F
Sbjct: 64 PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNL------PLEAWEKVLRVNLTGSFL 117
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
VAR + +++ E G ++ T S+A G G Y+A K G+VG+ +A +LA
Sbjct: 118 VARKAGEVLEEG--------GSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELA 168
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPL 239
G+RVN + PGL TP+ + L + P R G P+E AQ +++ +
Sbjct: 169 RKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAY 227
Query: 240 INGEVIRIDG 249
I G+ + +DG
Sbjct: 228 ITGQALYVDG 237
>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
pdb|3AY7|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
Length = 269
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAK----ELGPDVKFAPV 57
LK V ++TGG++GLG+A + E AK E G
Sbjct: 13 LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
DVT EEDV V FG LDV +N AG+ N H SLD++ +++ N
Sbjct: 73 DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVE--------NPVPSHELSLDNWNKVIDTN 124
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
G F +R + + EN + +G +IN +S+ V Y+ASK G+ MT
Sbjct: 125 LTGAFLGSREAIKYFVENDI-----KGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTET 179
Query: 176 MARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
+A + A GIRVN I PG +TP+ + V+ S+ +G P+E A
Sbjct: 180 LALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVA 233
>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|C Chain C, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|D Chain D, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
Length = 269
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAK----ELGPDVKFAPV 57
LK V ++TGG++GLG+A + E AK E G
Sbjct: 13 LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
DVT EEDV V FG LDV +N AG+ N H SLD++ +++ N
Sbjct: 73 DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVE--------NPVPSHELSLDNWNKVIDTN 124
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
G F +R + + EN + +G +IN +S+ V Y+ASK G+ MT
Sbjct: 125 LTGAFLGSREAIKYFVENDI-----KGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTET 179
Query: 176 MARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
+A + A GIRVN I PG +TP+ + V+ S+ +G P+E A
Sbjct: 180 LALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVA 233
>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUS|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUT|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUT|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUU|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
pdb|3AUU|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
Length = 269
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 104/234 (44%), Gaps = 20/234 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAK----ELGPDVKFAPV 57
LK V ++TGG++GLG+A + E AK E G
Sbjct: 13 LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLVN 115
DVT EEDV V FG LDV +N AG+ N H SLD++ +++ N
Sbjct: 73 DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVE--------NPVPSHELSLDNWNKVIDTN 124
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
G F +R + + EN + +G +IN +S+ V Y+ASK G+ MT
Sbjct: 125 LTGAFLGSREAIKYFVENDI-----KGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTET 179
Query: 176 MARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
+A + A GIRVN I PG +TP+ + V+ S+ +G P+E A
Sbjct: 180 LALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVA 233
>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|B Chain B, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|C Chain C, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|D Chain D, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|E Chain E, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|F Chain F, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|G Chain G, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|H Chain H, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|I Chain I, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|J Chain J, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|K Chain K, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|L Chain L, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|M Chain M, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|N Chain N, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|O Chain O, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|P Chain P, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
Length = 270
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 13/171 (7%)
Query: 33 LCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAF 92
+CD S G ++ +EL P F DVT E+DV+ V FG+LD VN AG
Sbjct: 38 ICDKDESGGRALEQEL-PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP 96
Query: 93 KIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA 152
+ + S F+++L +N +GT+ + +L+ + +++ G +IN +S+
Sbjct: 97 Q-----RPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-------GNVINISSLVG 144
Query: 153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML 203
GQ+ V Y A+K + MT +A D + G+RVN I+PG TPL L
Sbjct: 145 AIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL 195
>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph
pdb|3SJU|B Chain B, Hedamycin Polyketide Ketoreductase Bound To Nadph
Length = 279
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 46 KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
+ G DV + DVTS ++V AV + FG + + VN AG + G L
Sbjct: 69 RAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRN--------GGGETADL 120
Query: 106 DD--FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYS 163
DD + +L N G F V R +++ + E G G I+N AS +G Y+
Sbjct: 121 DDALWADVLDTNLTGVFRVTR---EVLRAGGMREAGW-GRIVNIASTGGKQGVMYAAPYT 176
Query: 164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ---- 219
ASK G+VG T + +LA GI VN + PG +TP+ E+VR AR +
Sbjct: 177 ASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMA----ERVREGYARHWGVTEQEVH 232
Query: 220 ----------RLGHPDEFAQLVQSIITNPL--INGEVIRIDGAL 251
R P+E A LV ++T+ I + + + G L
Sbjct: 233 ERFNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL 276
>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGK|B Chain B, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGL|A Chain A, X-Ray Structure Of Binary-Secoisolariciresinol
Dehydrogenase
pdb|2BGM|A Chain A, X-Ray Structure Of Ternary-Secoisolariciresinol
Dehydrogenase
Length = 278
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 17/174 (9%)
Query: 33 LCDLPTSEGESVAKELG-PDV-KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGI-- 88
+ D+ G+ V +G PDV F DVT +EDV+ V GKLD+ G+
Sbjct: 45 IADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLS 104
Query: 89 SCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTA 148
+ + I +DFKR++ +N G F VA+ +A+++ K +G I+ TA
Sbjct: 105 TTPYSILEAGN------EDFKRVMDINVYGAFLVAKHAARVMIPAK------KGSIVFTA 152
Query: 149 SIAAYE-GQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
SI+++ G+ Y+A+K ++G+T + +L GIRVN ++P + +PLL+
Sbjct: 153 SISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLT 206
>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida
Tropicalis Peroxisomal Multifunctional Enzyme Type 2
Length = 604
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 37/257 (14%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTS-----EGESVAKELGPDVKFAP 56
LK V L+TG +GLGK + D + E ++ E PD
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQH--- 376
Query: 57 VDVTSE-EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
DV + E + K V+ D +G +D+ VN AGI + ++ K + D +++ L+
Sbjct: 377 -DVAKDSEAIIKNVI---DKYGTIDILVNNAGI---LRDRSFAKMSKQEWDSVQQVHLI- 428
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
GTFN++RL+ E + G IIN S + G GQ YS+SK+GI+G++
Sbjct: 429 --GTFNLSRLAWPYFVEKQF------GRIINITSTSGIYGNFGQANYSSSKAGILGLSKT 480
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
MA + A I+VN +AP LS++ E+ +N L H D+ A L+ +
Sbjct: 481 MAIEGAKNNIKVNIVAPHAETAMTLSIMREQDKN-----------LYHADQVAPLLVYLG 529
Query: 236 TNPL-INGEVIRIDGAL 251
T+ + + GE I G
Sbjct: 530 TDDVPVTGETFEIGGGW 546
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 21/200 (10%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL---------PTSEGESVAKELGPDV 52
K V ++TG GLGK + DL + + V E+ +
Sbjct: 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65
Query: 53 KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRIL 112
A D + D K V +FG + V +N AGI + + K T D+K ++
Sbjct: 66 GVAVADYNNVLDGDKIVETAVKNFGTVHVIINNAGI---LRDASMKKMTEK---DYKLVI 119
Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
V+ G F V + + + K G I+NT+S A G GQ Y+++KS ++G
Sbjct: 120 DVHLNGAFAVTKAAWPYFQKQKY------GRIVNTSSPAGLYGNFGQANYASAKSALLGF 173
Query: 173 TLPMARDLAGAGIRVNTIAP 192
+A++ A I+ N IAP
Sbjct: 174 AETLAKEGAKYNIKANAIAP 193
>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IJK|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Length = 271
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46 KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGI---SCAFKIFNYNKGTV 102
+E G D SE D +A+ S G L VN AG+ A K+
Sbjct: 75 EEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKM-------- 126
Query: 103 HSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY 162
+DF ++ N F R + +++ +++ G ++N ASI G GQ Y
Sbjct: 127 -KTEDFHHVIDNNLTSAFIGCREALKVMSKSRF------GSVVNVASIIGERGNMGQTNY 179
Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLG 222
SASK G++ M+ A + A IR N++ PG +T + + L ++++ ++IP RLG
Sbjct: 180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIP-LNRLG 238
Query: 223 HPDEFAQLVQSIITN--PLINGEVIRIDGALRM 253
E A+ V ++++ I GE ++++G L M
Sbjct: 239 SAKEVAEAVAFLLSDHSSYITGETLKVNGGLYM 271
>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|B Chain B, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|E Chain E, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|F Chain F, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
Length = 261
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 26/263 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA-----KELGPDVKFAP 56
L+G V ++TG ++GLGK + + + + E E+ + K++G +
Sbjct: 5 LEGKVVVITGSSTGLGK-SMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 57 VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
DVT E DV V FGKLDV +N AG+ N + H SL D+ +++
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLE--------NPVSSHEMSLSDWNKVIDT 115
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
N G F +R + + EN + +G +IN +S+ V Y+ASK G+ MT
Sbjct: 116 NLTGAFLGSREAIKYFVENDI-----KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTK 170
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
+A + A GIRVN I PG +TP+ + + + R + IP +G P+E A +
Sbjct: 171 TLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-GYIGEPEEIAAVAA 229
Query: 233 SIITN--PLINGEVIRIDGALRM 253
+ ++ + G + DG + +
Sbjct: 230 WLASSEASYVTGITLFADGGMTL 252
>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
Length = 261
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 26/261 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA-----KELGPDVKFAP 56
L+G V ++TG ++GLGK + + + + E E+ + K++G +
Sbjct: 5 LEGKVVVITGSSTGLGK-SMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 57 VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
DVT E DV V FGKLDV +N AG++ N + H SL D+ +++
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLA--------NPVSSHEMSLSDWNKVIDT 115
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
N G F +R + + EN + +G +IN +S+ V Y+ASK G+ MT
Sbjct: 116 NLTGAFLGSREAIKYFVENDI-----KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTE 170
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
+A + A GIRVN I PG +TP+ + + + R + IP +G P+E A +
Sbjct: 171 TLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-GYIGEPEEIAAVAA 229
Query: 233 SIITN--PLINGEVIRIDGAL 251
+ ++ + G + DG +
Sbjct: 230 WLASSEASYVTGITLFADGGM 250
>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
Length = 261
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 26/263 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA-----KELGPDVKFAP 56
L+G V ++TG ++GLGK + + + + E E+ + K++G +
Sbjct: 5 LEGKVVVITGSSTGLGK-SMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 57 VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
DVT E DV V FGKLDV +N AG+ N + H SL D+ +++
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLE--------NPVSSHEMSLSDWNKVIDT 115
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
N G F +R + + EN + +G +IN +S+ V Y+ASK G+ MT
Sbjct: 116 NLTGAFLGSREAIKYFVENDI-----KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTE 170
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
+A + A GIRVN I PG +TP+ + + + R + IP +G P+E A +
Sbjct: 171 TLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-GYIGEPEEIAAVAA 229
Query: 233 SIITN--PLINGEVIRIDGALRM 253
+ ++ + G + DG + +
Sbjct: 230 WLASSEASYVTGITLFADGGMTL 252
>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
pdb|2B4Q|B Chain B, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
Length = 276
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 14/258 (5%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGP--DVKFAPVDV 59
L G + LVTGG+ G+G+ +C A L D + P D+
Sbjct: 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADL 86
Query: 60 TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
+SE ++ + +LD+ VN AG S + +Y + +++++ +N
Sbjct: 87 SSEAGARRLAQALGELSARLDILVNNAGTSWGAALESY------PVSGWEKVMQLNVTSV 140
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV-AYSASKSGIVGMTLPMAR 178
F+ + L+ + E+ R +IN S+A Q AY SK+ + ++ +A+
Sbjct: 141 FSCIQQLLPLLRRSASAENPAR--VINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAK 198
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ-RLGHPDEFAQLVQSI--I 235
+L G I VN IAPG F + + + + A S P R G P+E A L S+
Sbjct: 199 ELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGT 258
Query: 236 TNPLINGEVIRIDGALRM 253
+ G VI IDG +
Sbjct: 259 AGAYMTGNVIPIDGGFHL 276
>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
pdb|4E3Z|B Chain B, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
Length = 272
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 118/265 (44%), Gaps = 47/265 (17%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA-----------------KELGP 50
LVTGG+ G+G A +C L +G V E G
Sbjct: 30 LVTGGSRGIGAA-------------VCRLAARQGWRVGVNYAANREAADAVVAAITESGG 76
Query: 51 DVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNY-NKGTVHSLDDFK 109
+ P DV + D+ FG+LD VN AGI +Y + S++ +
Sbjct: 77 EAVAIPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGI------VDYPQRVDEXSVERIE 130
Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-VAYSASKSG 168
R L VN G+ A A+ + G G I+N +S AA G + Q V Y+ASK+
Sbjct: 131 RXLRVNVTGSILCA---AEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAA 187
Query: 169 IVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIPAPQRLGHPDE 226
I T+ +AR++A GIRVN + PG+ +T L + L ++ R A S+P QR G P+E
Sbjct: 188 IDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRARE-XAPSVPX-QRAGXPEE 245
Query: 227 FAQLVQSII--TNPLINGEVIRIDG 249
A + ++ + + G ++ + G
Sbjct: 246 VADAILYLLSPSASYVTGSILNVSG 270
>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AG3|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
Length = 269
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 117/257 (45%), Gaps = 18/257 (7%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
L+G V LVTG + G+G+A S E +A+ L G + +D
Sbjct: 25 LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLD 84
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
V+S+E V + + G+ + VN AGI+ + + D + +VNT
Sbjct: 85 VSSDESVAATLEHIQQHLGQPLIVVNNAGIT--------RDNLLVRMKDDEWFDVVNT-N 135
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
++ RLS ++ G IIN S+ G +GQ Y+A+K+G+ G T +AR
Sbjct: 136 LNSLYRLSKAVLRGMT---KARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAR 192
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN- 237
++ I VN +APG DT + L E R L IP RLG +E A++V + ++
Sbjct: 193 EVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLG-RLGQAEEIAKVVGFLASDG 251
Query: 238 -PLINGEVIRIDGALRM 253
+ G + ++G + M
Sbjct: 252 AAYVTGATVPVNGGMYM 268
>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|B Chain B, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|E Chain E, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|F Chain F, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
Length = 261
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 26/261 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA-----KELGPDVKFAP 56
L+G V ++TG ++GLGK + + + + E E+ + K++G +
Sbjct: 5 LEGKVVVITGSSTGLGK-SMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 57 VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH--SLDDFKRILLV 114
DVT E DV V FGKLDV +N AG+ N + H SL D+ +++
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLE--------NPVSSHEMSLSDWNKVIDT 115
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
N G F +R + + EN + +G +IN +S+ V Y+ASK G+ MT
Sbjct: 116 NLTGAFLGSREAIKYFVENDI-----KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTE 170
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
+A + A GIRVN I PG +TP+ + + + R + IP +G P+E A +
Sbjct: 171 TLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-GYIGEPEEIAAVAA 229
Query: 233 SIITNP--LINGEVIRIDGAL 251
+ ++ + G + DG +
Sbjct: 230 WLASSEASYVTGITLFADGGM 250
>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GED|B Chain B, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GEG|A Chain A, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
pdb|3GEG|B Chain B, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
Length = 247
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 117/260 (45%), Gaps = 32/260 (12%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVT 60
M +GV+ VTGG G+GK D+ AKE P++ + DV
Sbjct: 1 MNRGVI--VTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER-PNLFYFHGDVA 57
Query: 61 SEEDVQKAVLLCKDSFGKLDVNVN--CAGISCAFKIFNYNKGTVHSL--DDFKRILLVNT 116
++K V + ++DV VN C G +KG + SL ++F IL V
Sbjct: 58 DPLTLKKFVEYAMEKLQRIDVLVNNACRG----------SKGILSSLLYEEFDYILSVGL 107
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
+ ++RL + +NK G IIN AS A++ + AY+++K GIV +T +
Sbjct: 108 KAPYELSRLCRDELIKNK-------GRIINIASTRAFQSEPDSEAYASAKGGIVALTHAL 160
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
A L G + VN IAPG + ++ +IPA ++G P + + +V +
Sbjct: 161 AMSL-GPDVLVNCIAPGWINVTEQQEFTQED----CAAIPAG-KVGTPKDISNMVLFLCQ 214
Query: 237 NPLINGEVIRIDGAL--RMI 254
I GE I +DG + RMI
Sbjct: 215 QDFITGETIIVDGGMSKRMI 234
>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|B Chain B, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|C Chain C, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|D Chain D, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
Length = 254
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 23/263 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
LK V +VTG SG+G+A +L + +EL G +V D
Sbjct: 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNT 116
V+ ++DV++ V +++ ++DV N AGI V + D ++R+L VN
Sbjct: 65 VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVT-------PVAEVSDELWERVLAVNL 117
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
F +R ++ + +GVI+NTASIA G Y+ +K G++G+T +
Sbjct: 118 YSAFYSSRAVIPIMLKQG------KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSI 171
Query: 177 ARDLAGAGIRVNTIAPGLFDTPL---LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
A GIR + PG T + S +E L + + RL P++ A ++
Sbjct: 172 AAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVF 231
Query: 234 IITN--PLINGEVIRIDGALRMI 254
+ ++ +NG+ + +DG L ++
Sbjct: 232 LASDEASFVNGDAVVVDGGLTVL 254
>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh)
(Apoenyzme) From Lactobacillus Brevis
pdb|1ZK4|A Chain A, Structure Of R-specific Alcohol Dehydrogenase (wildtype)
From Lactobacillus Brevis In Complex With Acetophenone
And Nadp
Length = 251
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 110/255 (43%), Gaps = 19/255 (7%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELG-PD-VKFAPVDV 59
L G V ++TGG G+G A + + GE AK +G PD ++F D
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS 63
Query: 60 TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD-DFKRILLVNTVG 118
+ E+ K + +FG + VN AGI+ NK + +++++L VN G
Sbjct: 64 SDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-------NKSVEETTTAEWRKLLAVNLDG 116
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
F RL Q ++ GL IIN +SI + G AY+ASK + M+ A
Sbjct: 117 VFFGTRLGIQ-----RMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAAL 171
Query: 179 D--LAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
D L +RVNT+ PG TPL+ L R+ +G P++ A + + +
Sbjct: 172 DCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS 231
Query: 237 N--PLINGEVIRIDG 249
N G +DG
Sbjct: 232 NESKFATGSEFVVDG 246
>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase
Type1, Complexed With Nad+
Length = 267
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 35/258 (13%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVK-----FA 55
M+ G V LVTG A G+G+A L D G L + F
Sbjct: 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFI 63
Query: 56 PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
DV ++ ++ D FG+LD+ VN AG V++ ++++ L +N
Sbjct: 64 QCDVADQQQLRDTFRKVVDHFGRLDILVNNAG--------------VNNEKNWEKTLQIN 109
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT-- 173
V + L L + +K N G G+IIN +S+A + Q Y ASK GIVG T
Sbjct: 110 LVSVISGTYLG--LDYMSKQN-GGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS 166
Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ- 232
+A +L +G+R+N I PG +T +L + EK N Q + + D +++
Sbjct: 167 AALAANLMNSGVRLNAICPGFVNTAILESI-EKEENM-------GQYIEYKDHIKDMIKY 218
Query: 233 -SIITNPLI-NGEVIRID 248
I+ PLI NG + I+
Sbjct: 219 YGILDPPLIANGLITLIE 236
>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
pdb|3OSU|B Chain B, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
Length = 246
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 113/249 (45%), Gaps = 21/249 (8%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE-GESVAKEL---GPDVKFAPVDVTSEE 63
LVTG + G+G++ + + E E+V +E+ G D +V +
Sbjct: 8 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADAD 67
Query: 64 DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN-V 122
+V+ + FG LDV VN AGI+ + + DD ++ N G FN +
Sbjct: 68 EVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKE---QEWDD---VIDTNLKGVFNCI 121
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
+ + Q + + G IIN +S+ G GQ Y A+K+G++G+T AR+LA
Sbjct: 122 QKATPQXLRQRS-------GAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELAS 174
Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLI 240
GI VN +APG + L+++++ IP R G + A V + ++ I
Sbjct: 175 RGITVNAVAPGFIVSDXTDALSDELKEQXLTQIPLA-RFGQDTDIANTVAFLASDKAKYI 233
Query: 241 NGEVIRIDG 249
G+ I ++G
Sbjct: 234 TGQTIHVNG 242
>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
Length = 281
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 29/214 (13%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCD-----------LPTSE--GESVA--K 46
+G L+TGGA G+G++ +CD L T++ E+VA +
Sbjct: 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 47 ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
+ G A VDV ++ V +D+ G +D+ + AGIS +
Sbjct: 68 KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESA------ 121
Query: 107 DFKRILLVNTVGTFN-VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
+ ++ N GTFN +A ++ +I N G I+ +S+ + Q +Y +S
Sbjct: 122 QWDEVIGTNLTGTFNTIAAVAPGMIKRN-------YGRIVTVSSMLGHSANFAQASYVSS 174
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPL 199
K G++G+T A DL G GI VN +APG +TP+
Sbjct: 175 KWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPM 208
>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp
pdb|1AE1|B Chain B, Tropinone Reductase-I Complex With Nadp
Length = 273
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 29/264 (10%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGES---VAKELGPDVKFAPVD 58
LKG LVTGG+ G+G A C E + + +E G +V+ + D
Sbjct: 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 59 VTSEEDVQKAVLLCKDSF-GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
+ S + K + F GKL++ VN AG+ + ++ + D+ I+ N
Sbjct: 79 LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTE------KDYNIIMGTNFE 132
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
+++++++ L+ ++ G +I +SIA + YSASK I MT +A
Sbjct: 133 AAYHLSQIAYPLLKASQ------NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLA 186
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML-------NEKVRNFLARSIPAPQ-RLGHPDEFAQ 229
+ A IRVN++APG+ TPL+ E++ NF+ ++ P R G P E +
Sbjct: 187 CEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT---PMGRAGKPQEVSA 243
Query: 230 LVQSII--TNPLINGEVIRIDGAL 251
L+ + I G++I DG
Sbjct: 244 LIAFLCFPAASYITGQIIWADGGF 267
>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|B Chain B, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|C Chain C, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|D Chain D, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
Length = 263
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 113/265 (42%), Gaps = 25/265 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G +VTGG+ G+G A + DL ++V L VDVT
Sbjct: 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTK 69
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
V A+ D+ G D+ AG+S + +++ VN G F
Sbjct: 70 RASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITD------EEWDFNFDVNARGVF- 122
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
L+ Q+ + L + +GVI+NTAS+AA G YSASK + G T +AR++A
Sbjct: 123 ---LANQIACRHFLASN-TKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMA 178
Query: 182 GAGIRVNTIAPG-----------LFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQL 230
IRVN + PG +++ L M E VR P R+ P++ A +
Sbjct: 179 PKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPL-GRIEEPEDVADV 237
Query: 231 VQSIITNP--LINGEVIRIDGALRM 253
V + ++ + G+ I + G +RM
Sbjct: 238 VVFLASDAARFMTGQGINVTGGVRM 262
>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|A Chain A, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|B Chain B, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|C Chain C, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
Length = 255
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 110/256 (42%), Gaps = 21/256 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTS---EGESVAKELGPDVKFAPVD 58
L G LVTG A GLG A L D+ + E G D D
Sbjct: 7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-SLDDFKRILLVNTV 117
VT E ++ A +D+ +N AGI Y K V L+++++++ N
Sbjct: 67 VTDELAIEAAFSKLDAEGIHVDILINNAGI-------QYRKPMVELELENWQKVIDTNLT 119
Query: 118 GTFNVARLSAQ-LIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
F V+R +A+ +I N G IIN S+ + + Y+A+K GI +T M
Sbjct: 120 SAFLVSRSAAKRMIARNS------GGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSM 173
Query: 177 ARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEF--AQLVQS 233
A + A I+ N I PG T + +++ +K + +S QR G P+E + S
Sbjct: 174 AAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLS 233
Query: 234 IITNPLINGEVIRIDG 249
+ ING++I +DG
Sbjct: 234 SKASDYINGQIIYVDG 249
>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|B Chain B, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|C Chain C, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|D Chain D, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|E Chain E, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|F Chain F, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|G Chain G, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|H Chain H, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
Length = 256
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 28/262 (10%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
V LVTG G+GKA + D + ++VA E+ G VDV+
Sbjct: 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
+ V AV + + G DV VN AG++ + I + V ++ +N G
Sbjct: 64 DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVD------KVYNINVKGVIWG 117
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
+ + + ++G G IIN S A + G YS+SK + G+T ARDLA
Sbjct: 118 IQAAVE-----AFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP 172
Query: 183 AGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ----------RLGHPDEFAQLVQ 232
GI VN PG+ TP+ + ++ +V + + RL P++ A V
Sbjct: 173 LGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACV- 231
Query: 233 SIITNP---LINGEVIRIDGAL 251
S + +P + G+ + IDG +
Sbjct: 232 SYLASPDSDYMTGQSLLIDGGM 253
>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QIV|B Chain B, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFA---PVDVTSE 62
VG+VTG G+G+A + D+ E+VAK++ D A VDV+
Sbjct: 11 VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDP 70
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
E + FG +D VN A I K+ + ++D +K+ + VN G
Sbjct: 71 ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKL-----DFLLTIDPEYYKKFMSVNLDGAL 125
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
R +++ G G I+N +S AA+ + Y +K GI G+T ++R+L
Sbjct: 126 WCTRA----VYKKMTKRGG--GAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLSREL 176
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEK-VRNFLARSIPAPQRLGHPDEFAQLVQSIITN-- 237
G IR+N IAPG DT K + + + + +P R+G PD+ + ++++
Sbjct: 177 GGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPL-SRMGTPDDLVGMCLFLLSDEA 235
Query: 238 PLINGEVIRIDG 249
I G++ +DG
Sbjct: 236 SWITGQIFNVDG 247
>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|B Chain B, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|C Chain C, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|D Chain D, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
Length = 277
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 20/256 (7%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G V +VTG +G+G A D+ ++ A ++G VDV+
Sbjct: 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSD 86
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E+ + V C +FG +D V AG+ + + +++DF R++ +N G +
Sbjct: 87 EQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDT------TVEDFDRVIAINLRGAWL 140
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+ +A + E G I+N +S+A G AY SK+GI+ ++ A +L
Sbjct: 141 CTKHAAPRMIERG------GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELR 194
Query: 182 GAGIRVNTIAPGLFDTPL----LSMLNEKVRNFLARSIPA--PQRLGHPDEFAQLVQSII 235
+GIR NT+ P DTP+ ++M + + ARS+ A R+ P+E A +V ++
Sbjct: 195 SSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLL 254
Query: 236 TN--PLINGEVIRIDG 249
++ +I G DG
Sbjct: 255 SDDASMITGTTQIADG 270
>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|B Chain B, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|C Chain C, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|D Chain D, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|E Chain E, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|F Chain F, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|G Chain G, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|H Chain H, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|I Chain I, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|J Chain J, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|K Chain K, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|L Chain L, Mannitol Dehydrogenase From Agaricus Bisporus
Length = 265
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 42 ESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGT 101
E V KE G K DV++ + V K + G + + AG+S T
Sbjct: 56 EKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVV------KPAT 109
Query: 102 VHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLN-----EDGLRGVIINTASIAAYEGQ 156
+ +DF + VN G FN R A+L + + + IIN +S+ G
Sbjct: 110 ELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL---NGS 166
Query: 157 SGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP 216
QV Y++SK+ + +A + A AGIRVN ++PG +T + +++K+R+ A +IP
Sbjct: 167 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIP 226
Query: 217 APQRLGHPDE 226
R P+E
Sbjct: 227 L-NRFAQPEE 235
>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
pdb|1K2W|B Chain B, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
Length = 256
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G L+TG A G+G+A + D+ + A E+GP +DVT
Sbjct: 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTD 62
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
+ + + V D +G +D+ VN A +F+ + + + R+ +N GT
Sbjct: 63 QASIDRCVAELLDRWGSIDILVNNAA------LFDLAPIVEITRESYDRLFAINVSGTLF 116
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+ + A+ + G G IIN AS A G++ Y A+K+ ++ +T +L
Sbjct: 117 MMQAVAR-----AMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI 171
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNF 210
GI VN IAPG+ D ++ K ++
Sbjct: 172 RHGINVNAIAPGVVDGEHWDGVDAKFADY 200
>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|B Chain B, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|C Chain C, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|D Chain D, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
Length = 454
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVKFAPVD 58
L G V +VTG A G+G D+ ++ E+ +K G + D
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL---D 267
Query: 59 VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
VT+++ V K +D G K D+ VN AGI+ + N +DD + +L VN
Sbjct: 268 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLAN--------MDDARWDAVLAVN 319
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
+ RL+ L+ + E G +I +SIA G GQ Y+ +K+G++G+T
Sbjct: 320 LLAPL---RLTEGLVGNGSIGEGGR---VIGLSSIAGIAGNRGQTNYATTKAGMIGITQA 373
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
+A LA GI +N +APG +T + + + R + R + + + G P + A+ + +
Sbjct: 374 LAPGLAAKGITINAVAPGFIETQMTAAIPLATRE-VGRRLNSLLQGGQPVDVAEAI-AYF 431
Query: 236 TNPLIN---GEVIRIDG 249
+P N G VIR+ G
Sbjct: 432 ASPASNAVTGNVIRVCG 448
>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|B Chain B, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|C Chain C, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|D Chain D, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
Length = 446
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVKFAPVD 58
L G V +VTG A G+G D+ ++ E+ +K G + D
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL---D 259
Query: 59 VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
VT+++ V K +D G K D+ VN AGI+ + N +DD + +L VN
Sbjct: 260 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLAN--------MDDARWDAVLAVN 311
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
+ RL+ L+ + E G +I +SIA G GQ Y+ +K+G++G+T
Sbjct: 312 LLAPL---RLTEGLVGNGSIGEGGR---VIGLSSIAGIAGNRGQTNYATTKAGMIGITQA 365
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
+A LA GI +N +APG +T + + + R + R + + + G P + A+ + +
Sbjct: 366 LAPGLAAKGITINAVAPGFIETQMTAAIPLATRE-VGRRLNSLLQGGQPVDVAEAI-AYF 423
Query: 236 TNPLIN---GEVIRIDG 249
+P N G VIR+ G
Sbjct: 424 ASPASNAVTGNVIRVCG 440
>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
Length = 267
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 55 APVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV 114
A DV+ V++ +++FG +DV VN AGI I F R++ V
Sbjct: 82 AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAV------FDRVIAV 135
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
N GTFN R +AQ + + G IIN ++ Y+A+K+G+ T
Sbjct: 136 NLKGTFNTLREAAQRLR--------VGGRIINXSTSQVGLLHPSYGIYAAAKAGVEAXTH 187
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPL-LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
++++L G I VN +APG T L L +++VR+ A+ P +RLG P + A V +
Sbjct: 188 VLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPL-ERLGTPQDIAGAV-A 245
Query: 234 IITNP---LINGEVIRIDGAL 251
+ P +NG+V+R +G +
Sbjct: 246 FLAGPDGAWVNGQVLRANGGI 266
>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1T|D Chain D, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1U|A Chain A, Crystal Structure Of A Beta-Ketoacyl Reductase Fabg4 From
Mycobacterium Tuberculosis H37rv Complexed With Nad+ And
Hexanoyl-Coa At 2.5 Angstrom Resolution
Length = 462
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVKFAPVD 58
L G V +VTG A G+G D+ ++ E+ +K G + D
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL---D 275
Query: 59 VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
VT+++ V K +D G K D+ VN AGI+ + N +DD + +L VN
Sbjct: 276 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLAN--------MDDARWDAVLAVN 327
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
+ RL+ L+ + E G +I +SIA G GQ Y+ +K+G++G+T
Sbjct: 328 LLAPL---RLTEGLVGNGSIGEGGR---VIGLSSIAGIAGNRGQTNYATTKAGMIGITQA 381
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
+A LA GI +N +APG +T + + + R + R + + + G P + A+ + +
Sbjct: 382 LAPGLAAKGITINAVAPGFIETQMTAAIPLATRE-VGRRLNSLLQGGQPVDVAEAI-AYF 439
Query: 236 TNPLIN---GEVIRIDG 249
+P N G VIR+ G
Sbjct: 440 ASPASNAVTGNVIRVCG 456
>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
pdb|3M1L|B Chain B, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
Length = 432
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVKFAPVD 58
L G V +VTG A G+G D+ ++ E+ +K G + D
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL---D 251
Query: 59 VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
VT+++ V K +D G K D+ VN AGI+ + N +DD + +L VN
Sbjct: 252 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLAN--------MDDARWDAVLAVN 303
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
+ RL+ L+ + E G +I +SIA G GQ Y+ +K+G++G+T
Sbjct: 304 LLAPL---RLTEGLVGNGSIGEGGR---VIGLSSIAGIAGNRGQTNYATTKAGMIGITQA 357
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
+A LA GI +N +APG +T + + + R + R + + + G P + A+ + +
Sbjct: 358 LAPGLAAKGITINAVAPGFIETQMTAAIPLATRE-VGRRLNSLLQGGQPVDVAEAI-AYF 415
Query: 236 TNPLIN---GEVIRIDG 249
+P N G VIR+ G
Sbjct: 416 ASPASNAVTGNVIRVCG 432
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 107/259 (41%), Gaps = 34/259 (13%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-------------PTSEGESV--AK 46
L+G V +TG A G G+ DL P E+V +
Sbjct: 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 47 ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
E G + DV +Q V FG +D+ V+ GIS N+G V SL
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS--------NQGEVVSLT 155
Query: 107 D--FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSA 164
D + IL N +G ++ R + E G G +I +S G GQ Y+A
Sbjct: 156 DQQWSDILQTNLIGAWHACRAVLP-----SMIERGQGGSVIFVSSTVGLRGAPGQSHYAA 210
Query: 165 SKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHP 224
SK G+ G+ L +A ++ IRVN++ PG +T + LNEK+ + P R
Sbjct: 211 SKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM--ALNEKLLKMFLPHLENPTREDAA 268
Query: 225 DEFAQLVQSIITNPLINGE 243
+ F+QL +++ P + E
Sbjct: 269 ELFSQL--TLLPIPWVEPE 285
>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
Length = 277
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 26/260 (10%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCD--LPT--SEGESVAKELGPDVKFAP 56
+L+ V +TGG SG+G + LP + +A G
Sbjct: 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLS 83
Query: 57 VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAG--ISCAFKIFNYNKGTVHSLDDFKRILLV 114
+DV + V AV FG++D+ +NCA C ++N FK ++ +
Sbjct: 84 MDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNA--------FKTVMDI 135
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
+T GTFNV+R+ ++E + G GVI+N + GQ+ QV ++K+ + MT
Sbjct: 136 DTSGTFNVSRV----LYEKFFRDHG--GVIVNITATLGNRGQALQVHAGSAKAAVDAMTR 189
Query: 175 PMARDLAGAGIRVNTIAPG-LFDTPLLSMLNEKVRNFLARSIPAP-QRLGHPDEFAQLVQ 232
+A + IRVN++APG + T L L + + +P QRLG+ E A V
Sbjct: 190 HLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVL 249
Query: 233 SIITNPL---INGEVIRIDG 249
+ +PL + G V+ DG
Sbjct: 250 -YLASPLASYVTGAVLVADG 268
>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
pdb|3LLS|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
Length = 475
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVKFAPVD 58
L G V +VTG A G+G D+ ++ E+ +K G + D
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWL---D 288
Query: 59 VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVN 115
VT+++ V K +D G K D+ VN AGI+ + N +DD + +L VN
Sbjct: 289 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLAN--------MDDARWDAVLAVN 340
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
+ RL+ L+ + E G +I +SIA G GQ Y+ +K+G++G+T
Sbjct: 341 LLAPL---RLTEGLVGNGSIGEGGR---VIGLSSIAGIAGNRGQTNYATTKAGMIGITQA 394
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
+A LA GI +N +APG +T + + + R + R + + + G P + A+ + +
Sbjct: 395 LAPGLAAKGITINAVAPGFIETQMTAAIPLATRE-VGRRLNSLLQGGQPVDVAEAI-AYF 452
Query: 236 TNPLIN---GEVIRIDG 249
+P N G VIR+ G
Sbjct: 453 ASPASNAVTGNVIRVCG 469
>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE2|B Chain B, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE1|A Chain A, Tropinone Reductase-Ii
Length = 260
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 26/262 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
L+G LVTGG+ G+G C E + G V+ + D
Sbjct: 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 66
Query: 59 VTSEEDVQKAVLLCKDSF-GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
++S + Q+ + + F GKL++ VN AGI Y + ++++D+ I+ +N
Sbjct: 67 LSSRSERQELMNTVANHFHGKLNILVNNAGIVI------YKEAKDYTVEDYSLIMSINFE 120
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
++++ L+ + ++ RG ++ +S++ + Y A+K + +T +A
Sbjct: 121 AAYHLSVLAHPFLKASE------RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLA 174
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLV 231
+ A IRVN + PG+ T L+ M E + + R A +R+G P E A +V
Sbjct: 175 FEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC--ALRRMGEPKELAAMV 232
Query: 232 QSII--TNPLINGEVIRIDGAL 251
+ + G++I +DG L
Sbjct: 233 AFLCFPAASYVTGQIIYVDGGL 254
>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPE|B Chain B, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPF|A Chain A, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
pdb|1IPF|B Chain B, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
Length = 259
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 26/262 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
L+G LVTGG+ G+G C E + G V+ + D
Sbjct: 6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65
Query: 59 VTSEEDVQKAVLLCKDSF-GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
++S + Q+ + + F GKL++ VN AGI Y + ++++D+ I+ +N
Sbjct: 66 LSSRSERQELMNTVANHFHGKLNILVNNAGIVI------YKEAKDYTVEDYSLIMSINFE 119
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
++++ L+ + ++ RG ++ +S++ + Y A+K + +T +A
Sbjct: 120 AAYHLSVLAHPFLKASE------RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLA 173
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLARSIPAPQRLGHPDEFAQLV 231
+ A IRVN + PG+ T L+ M E + + R A +R+G P E A +V
Sbjct: 174 FEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC--ALRRMGEPKELAAMV 231
Query: 232 QSII--TNPLINGEVIRIDGAL 251
+ + G++I +DG L
Sbjct: 232 AFLCFPAASYVTGQIIYVDGGL 253
>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|B Chain B, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|C Chain C, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|D Chain D, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|A Chain A, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|B Chain B, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
Length = 249
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 24/258 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESVAKELGPDVKFAPVDVT 60
LK + ++TGGA+G+G+A + DL P E E+ + LG V DV+
Sbjct: 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS 64
Query: 61 SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
DV+ +FG+ D+ VN AGI + + +++ T + +K+ +N F
Sbjct: 65 QPGDVEAFGKQVISTFGRCDILVNNAGI---YPLIPFDELT---FEQWKKTFEINVDSGF 118
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
+A+ + N G IIN S + Y ++K+ +G T +A DL
Sbjct: 119 LMAKAFVPGMKRNGW------GRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDL 172
Query: 181 AGAGIRVNTIAPGLFDTPL-----LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
GI VN IAP L T LS + + + N L ++IP RL P + +
Sbjct: 173 GKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML-QAIP---RLQVPLDLTGAAAFLA 228
Query: 236 TN--PLINGEVIRIDGAL 251
++ I G+ + +DG +
Sbjct: 229 SDDASFITGQTLAVDGGM 246
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 22/258 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESVA--KELGPDVKFAPVD 58
L G LVTG + GLG+A + P+ ++V + +G D + D
Sbjct: 24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD 83
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-SLDDFKRILLVNTV 117
VTSE ++ +A + +D+ VN AGI + K + D++R++ N
Sbjct: 84 VTSESEIIEAFARLDEQGIDVDILVNNAGI-------QFRKPMIELETADWQRVIDTNLT 136
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
F + R +A+ + G I+N S+ + ++ Y+ +K GI +T MA
Sbjct: 137 SAFMIGREAAKRMIPRGY------GKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMA 190
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEF--AQLVQS 233
+ A GI+ N I PG T + L N + ++ PA +R G P E + S
Sbjct: 191 AEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA-KRWGKPQELVGTAVFLS 249
Query: 234 IITNPLINGEVIRIDGAL 251
+ +NG++I +DG +
Sbjct: 250 ASASDYVNGQIIYVDGGM 267
>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3R1I|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 276
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 20/255 (7%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL-GPDVKFAPV--D 58
L G L+TG ++G+GK + + + VA E+ G K P+ D
Sbjct: 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
VT + V+ + G +D+ V AGI + + L++F+RI N G
Sbjct: 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDM------PLEEFQRIQDTNVTG 143
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA--YSASKSGIVGMTLPM 176
F A+ +A+ + + GL G II TAS++ + Q Y SK+ +V +T M
Sbjct: 144 VFLTAQAAAR-----AMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAM 198
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
A +LA IRVN+++PG T L+ L + IP R+G P+E L + +
Sbjct: 199 AVELAPHQIRVNSVSPGYIRTELVEPLAD-YHALWEPKIPL-GRMGRPEELTGLYLYLAS 256
Query: 237 --NPLINGEVIRIDG 249
+ + G I IDG
Sbjct: 257 AASSYMTGSDIVIDG 271
>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|B Chain B, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|C Chain C, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|D Chain D, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
Length = 303
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 124/266 (46%), Gaps = 34/266 (12%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELG---PDVKFAPV 57
+L+G V +VTGGA+G+GKA + +S A EL P K A V
Sbjct: 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74
Query: 58 -----DVTSEEDVQKAVLLCKDSFGKLDVNVNCAG---ISCAFKIFNYNKGTVHSLDDFK 109
++ +EE+V V D+FGK++ VN G +S A I S +
Sbjct: 75 IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHI---------SSKGWH 125
Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGI 169
+L N GTF + + ++ + + E G G I+N + G V A+++G+
Sbjct: 126 AVLETNLTGTFYMCKA----VYSSWMKEHG--GSIVNII-VPTKAGFPLAVHSGAARAGV 178
Query: 170 VGMTLPMARDLAGAGIRVNTIAPG-LFDTPLLSMLNEKVRNFLARS---IPAPQRLGHPD 225
+T +A + A +GIR+N +APG ++ + ++F S IPA +R+G P+
Sbjct: 179 YNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-KRIGVPE 237
Query: 226 EFAQLVQSIIT--NPLINGEVIRIDG 249
E + +V +++ I G+ + +DG
Sbjct: 238 EVSSVVCFLLSPAASFITGQSVDVDG 263
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
V LVTG SG+G +C + KEL G + DV S
Sbjct: 28 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
+++ V + +G +DV VN AG G L D + ++ N G F
Sbjct: 88 PEIEALVAAVVERYGPVDVLVNNAG--------RLGGGATAELADELWLDVVETNLTGVF 139
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
R++ Q++ + E G G I+N AS +G YSASK G+VG T + +L
Sbjct: 140 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 195
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
A GI VN + PG +TP+ + + E + S I A +G P E A++
Sbjct: 196 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 255
Query: 231 VQSII 235
V +I
Sbjct: 256 VAYLI 260
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
V LVTG SG+G +C + KEL G + DV S
Sbjct: 24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 83
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
+++ V + +G +DV VN AG G L D + ++ N G F
Sbjct: 84 PEIEALVAAVVERYGPVDVLVNNAG--------RLGGGATAELADELWLDVVETNLTGVF 135
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
R++ Q++ + E G G I+N AS +G YSASK G+VG T + +L
Sbjct: 136 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 191
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
A GI VN + PG +TP+ + + E + S I A +G P E A++
Sbjct: 192 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 251
Query: 231 VQSII 235
V +I
Sbjct: 252 VAYLI 256
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
V LVTG SG+G +C + KEL G + DV S
Sbjct: 8 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 67
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
+++ V + +G +DV VN AG G L D + ++ N G F
Sbjct: 68 PEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGVF 119
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
R++ Q++ + E G G I+N AS +G YSASK G+VG T + +L
Sbjct: 120 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 175
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
A GI VN + PG +TP+ + + E + S I A +G P E A++
Sbjct: 176 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 235
Query: 231 VQSII 235
V +I
Sbjct: 236 VAYLI 240
>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
pdb|3SVT|B Chain B, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
Length = 281
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 49 GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD- 107
G +++ P D+T+E++ +AV G+L V+CAG S N G + +D
Sbjct: 62 GGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGS-------ENIGPITQVDSE 114
Query: 108 -FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASK 166
++R + +N GT V L H + G G + +SIAA AY +K
Sbjct: 115 AWRRTVDLNVNGTMYV------LKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTK 168
Query: 167 SGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE--KVRNFLARSIPAPQRLGHP 224
S + + A +L + +RVN+I PGL T L++ + E ++ + A P P R G
Sbjct: 169 SAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLP-RQGEV 227
Query: 225 DEFAQLVQSIITN--PLINGEVIRIDG 249
++ A + ++++ + G+VI +DG
Sbjct: 228 EDVANMAMFLLSDAASFVTGQVINVDG 254
>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|B Chain B, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|C Chain C, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|D Chain D, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3RWB|A Chain A, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|B Chain B, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|C Chain C, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|D Chain D, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
Length = 247
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 13/252 (5%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G LVTG A G+GKA + D+ ++ A +G + D++
Sbjct: 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISD 63
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
V+ + G +D+ VN A I + + LD +++I+ VN GTF
Sbjct: 64 PGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVD------LDHWRKIIDVNLTGTFI 117
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
V R +++ G G +I+ AS + G AY A+K G++G T +A +L
Sbjct: 118 VTRAG-----TDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELG 172
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--L 239
I N + PGL ++ + + A + G P+ A +V + ++
Sbjct: 173 KYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARW 232
Query: 240 INGEVIRIDGAL 251
I G+ + +D +
Sbjct: 233 ITGQTLNVDAGM 244
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
V LVTG SG+G +C + KEL G + DV S
Sbjct: 28 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
+++ V + +G +DV VN AG G L D + ++ N G F
Sbjct: 88 PEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGVF 139
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
R++ Q++ + E G G I+N AS +G YSASK G+VG T + +L
Sbjct: 140 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 195
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
A GI VN + PG +TP+ + + E + S I A +G P E A++
Sbjct: 196 ARTGITVNAVCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 255
Query: 231 VQSII 235
V +I
Sbjct: 256 VAYLI 260
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
V LVTG SG+G +C + KEL G + DV S
Sbjct: 28 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
+++ V + +G +DV VN AG G L D + ++ N G F
Sbjct: 88 PEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGVF 139
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
R++ Q++ + E G G I+N AS +G YSASK G+VG T + +L
Sbjct: 140 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLEL 195
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
A GI VN + PG +TP+ + + E + S I A +G P E A++
Sbjct: 196 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 255
Query: 231 VQSII 235
V +I
Sbjct: 256 VAYLI 260
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
V LVTG SG+G +C + KEL G + DV S
Sbjct: 28 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
+++ V + +G +DV VN AG G L D + ++ N G F
Sbjct: 88 PEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGVF 139
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
R++ Q++ + E G G I+N AS +G YSASK G+VG T + +L
Sbjct: 140 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 195
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
A GI VN + PG +TP+ + + E + S I A +G P E A++
Sbjct: 196 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 255
Query: 231 VQSII 235
V +I
Sbjct: 256 VAYLI 260
>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC0|B Chain B, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
V LVTG SG+G +C + KEL G + DV S
Sbjct: 28 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
+++ V + +G +DV VN AG G L D + ++ N G F
Sbjct: 88 PEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGVF 139
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
R++ Q++ + E G G I+N AS +G YSASK G+VG T + +L
Sbjct: 140 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 195
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
A GI VN + PG +TP+ + + E + S I A +G P E A++
Sbjct: 196 ARTGITVNAVCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 255
Query: 231 VQSII 235
V +I
Sbjct: 256 VAYLI 260
>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|B Chain B, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|C Chain C, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|D Chain D, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
Length = 269
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 36/260 (13%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
V +VTGG+SG+G A L +V+ +DVT+EE+V
Sbjct: 16 VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF-------KIDVTNEEEV 68
Query: 66 QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
++AV +G++D+ VN AGI Y+ + + ++RI+ VN G++ +A+
Sbjct: 69 KEAVEKTTKKYGRIDILVNNAGIE------QYSPLHLTPTEIWRRIIDVNVNGSYLMAKY 122
Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
+ ++ G IIN AS+ +Y AY SK ++G+T +A D A I
Sbjct: 123 TIPVMLAIG------HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYA-PKI 175
Query: 186 RVNTIAPGLFDTPLL------------SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQS 233
R N + PG TP++ + + K+ + R P R+G P+E A++V
Sbjct: 176 RCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEW-GRQHPM-GRIGRPEEVAEVVAF 233
Query: 234 IITN--PLINGEVIRIDGAL 251
+ ++ I G + +DG L
Sbjct: 234 LASDRSSFITGACLTVDGGL 253
>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|B Chain B, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|C Chain C, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|D Chain D, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
Length = 247
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 22/251 (8%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEG-----ESVAKELGPDVKFAPVDVT 60
V LVTG + G+G + TS+ E+ KE G + ++++
Sbjct: 7 VALVTGASRGIG--FEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLNIS 64
Query: 61 SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
E +Q K +D+ VN AGI+ N S D+++ ++ N F
Sbjct: 65 DIESIQNFFAEIKAENLAIDILVNNAGIT------RDNLXXRXSEDEWQSVINTNLSSIF 118
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
++ + + + G II+ S+ G GQ Y A+K+G++G + +A ++
Sbjct: 119 RXSKECVRGXXKKRW------GRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEV 172
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--P 238
A I VN +APG T L ++ ++F+A IP+ Q +G P + A V + +
Sbjct: 173 ASRNITVNVVAPGFIATDXTDKLTDEQKSFIATKIPSGQ-IGEPKDIAAAVAFLASEEAK 231
Query: 239 LINGEVIRIDG 249
I G+ + ++G
Sbjct: 232 YITGQTLHVNG 242
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
V LVTG SG+G +C + KEL G + DV S
Sbjct: 24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 83
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD--FKRILLVNTVGTF 120
+++ V + +G +DV VN AG G L D + ++ N G F
Sbjct: 84 PEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGVF 135
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
R++ Q++ + E G G I+N AS +G YSASK G+VG T + +L
Sbjct: 136 ---RVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 191
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARS-------IPAPQRLG---HPDEFAQL 230
A GI VN + PG +TP+ + + E + S I A +G P E A++
Sbjct: 192 ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 251
Query: 231 VQSII 235
V +I
Sbjct: 252 VAYLI 256
>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|E Chain E, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|F Chain F, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|G Chain G, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|H Chain H, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
Length = 255
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL--PTSEGESVAKELGPDVKFAPVDV 59
LKG LVTG SG+G L P +A+ G P D+
Sbjct: 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARH-GVKAVHHPADL 60
Query: 60 TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
+ ++ L + FG +D+ VN AGI + + L+ + +I+ +N
Sbjct: 61 SDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQF------PLESWDKIIALNLSAV 114
Query: 120 FNVARLSAQLIHENKLNEDGLR----GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
F H +L G+R G IIN AS+ G +G+ AY A+K G+VG+T
Sbjct: 115 F----------HGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKV 164
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLL 200
+ + A + + N I PG TPL+
Sbjct: 165 VGLETATSNVTCNAICPGWVLTPLV 189
>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|N Chain N, Architecture Of Mammalian Fatty Acid Synthase
Length = 226
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 115/252 (45%), Gaps = 30/252 (11%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
+G + LVTG + G+G+A + ++++ LG + K ++VT
Sbjct: 3 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
++ + + FG++D+ VN AGI+ + +++ I+ N F
Sbjct: 63 PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKD------EEWNDIIETNLSSVFR 116
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
+++ + + + + G II GQ Y+A+K+G++G + +AR++A
Sbjct: 117 LSKAVMRAMMKKR------HGRIITIG---------GQANYAAAKAGLIGFSKSLAREVA 161
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
GI VN +APG +T +++ LA+ +PA RLG E A V + ++
Sbjct: 162 SRGITVNVVAPGFIETS-----DDQRAGILAQ-VPAG-RLGGAQEIANAVAFLASDEAAY 214
Query: 240 INGEVIRIDGAL 251
I GE + ++G +
Sbjct: 215 ITGETLHVNGGM 226
>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|B Chain B, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|C Chain C, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|D Chain D, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
Length = 247
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 14/254 (5%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G LVTG A G+GKA + D+ ++ A +G + D++
Sbjct: 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISD 63
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
V+ + G +D+ VN A I + + LD +++I+ VN GTF
Sbjct: 64 PGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVD------LDHWRKIIDVNLTGTFI 117
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
V R ++ G G +I+ AS + G AY A+K G++G T +A +L
Sbjct: 118 VTRAG-----TDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELG 172
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--L 239
I N + PGL ++ + + A + G P+ A +V + ++
Sbjct: 173 KYNITANAVTPGLIESDGVKASPHNEAFGFVEXLQAXKGKGQPEHIADVVSFLASDDARW 232
Query: 240 INGEVIRID-GALR 252
I G+ + +D G +R
Sbjct: 233 ITGQTLNVDAGXVR 246
>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|B Chain B, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|C Chain C, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|D Chain D, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
Length = 259
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L+G L+TG A G+G+A + D+ A E+GP DVT
Sbjct: 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQXDVTR 65
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
++ + A+ + G LD+ VN A + I + + ++++ +N GT
Sbjct: 66 QDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITR------ESYEKLFAINVAGT-- 117
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
L + G G IIN AS A G++ Y A+K+ ++ +T DL
Sbjct: 118 ---LFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLI 174
Query: 182 GAGIRVNTIAPGLFD 196
I VN IAPG+ D
Sbjct: 175 KHRINVNAIAPGVVD 189
>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
Length = 322
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-------PTSEG---ESVAKELGP 50
++ G V +VTG G+G+A + D+ P S G +SV E+
Sbjct: 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83
Query: 51 DVKFAPVDVTSEEDVQKAVLLCK---DSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD 107
A D ++ D +A L + ++FG LDV VN AGI I N ++ ++
Sbjct: 84 AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSE------EE 137
Query: 108 FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKS 167
F ++ V+ G F R +A + G IINT+S A +G GQ YSA+K+
Sbjct: 138 FDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKA 197
Query: 168 GIVGMTLPMARDLAGAGIRVNTIAPG----LFDTPLLSMLNEKVRNFLA 212
GI +TL A ++ G+ VN IAP + +T M+ + ++F A
Sbjct: 198 GIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFAEMMATQDQDFDA 246
>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase
pdb|2EHD|B Chain B, Crystal Structure Analysis Of Oxidoreductase
Length = 234
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
+KG V L+TG + G+G+AT L +++A EL + P DV
Sbjct: 4 MKGAV-LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPL-PGDVRE 61
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
E D +AV +++FG+L VN AG+ + +L++++ +L N G F
Sbjct: 62 EGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHEL------TLEEWRLVLDTNLTGAFL 115
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
R + + L G G I+N S+A G AY+ASK G++G+ DL
Sbjct: 116 GIRHAVPAL----LRRGG--GTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLR 169
Query: 182 GAGIRVNTIAPGLFDT 197
A +RV + PG DT
Sbjct: 170 EANVRVVNVLPGSVDT 185
>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|D Chain D, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|A Chain A, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|B Chain B, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|E Chain E, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|F Chain F, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|G Chain G, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|H Chain H, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
Length = 258
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 28/263 (10%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVK--FAPVDVT 60
V +VTGGA G+G+ + DLP E E++ D K F +DVT
Sbjct: 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT 63
Query: 61 SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
+ + A+ + G DV VN AGI+ + + +D K+I VN F
Sbjct: 64 DKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTE------EDLKQIYSVNVFSVF 117
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
+ +++ K +E G++G IIN ASIAA +G AYS +K + G+T A++L
Sbjct: 118 FGIQAASR-----KFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQEL 172
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKV---------RNFLARSIP-APQRLGHPDEFAQL 230
A G VN APG+ T + ++ ++ NF S A R P++ A L
Sbjct: 173 APKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGL 232
Query: 231 VQSIIT--NPLINGEVIRIDGAL 251
V + + + + G+V+ +DG +
Sbjct: 233 VSFLASENSNYVTGQVMLVDGGM 255
>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIV|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
Length = 267
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
G II +S++ G GQV YSA+K+GI+G T +A +LA I VN IAPGL DT ++
Sbjct: 157 GRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIE 216
Query: 202 MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDGAL 251
M ++ A S+ +R+G +E A L ++++ + +VI I+G +
Sbjct: 217 MEESALKE--AMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM 266
>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1WMB|B Chain B, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1X1T|A Chain A, Crystal Structure Of D-3-hydroxybutyrate Dehydrogenase
From Pseudomonas Fragi Complexed With Nad+
pdb|2ZTL|A Chain A, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|B Chain B, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|C Chain C, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|D Chain D, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTV|A Chain A, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|B Chain B, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|C Chain C, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|D Chain D, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
Length = 260
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 104/244 (42%), Gaps = 34/244 (13%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESV----AKELGPDVKFA 55
MLKG V +VTG SG+G L +E E V A + G V +
Sbjct: 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 56 PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
D++ E V+ V G++D+ VN AGI I ++ + + IL +N
Sbjct: 61 GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF------PTEKWDAILALN 114
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
F+ +A L H + + G G IIN AS + + AY A+K G+VG T
Sbjct: 115 LSAVFH--GTAAALPH---MKKQGF-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKV 168
Query: 176 MARDLAGAGIRVNTIAPGLFDTPL----LSMLNEK--------VRNFLARSIPA-----P 218
A + AG GI N I PG TPL +S L EK R L+ P+ P
Sbjct: 169 TALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTP 228
Query: 219 QRLG 222
++LG
Sbjct: 229 EQLG 232
>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|B Chain B, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|C Chain C, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|D Chain D, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
Length = 294
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 25/236 (10%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGES-----VAKELGPDVKFAP 56
LK LVTGG SG+G+A + LP E ++ + +E G P
Sbjct: 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106
Query: 57 VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAF-KIFNYNKGTVHSLDDFKRILLVN 115
D++ E + V +++ G LD+ AG A +I + + F++ VN
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTS------EQFQQTFAVN 160
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
F + + + L+ + II T+SI AY+ + Y+A+K+ I+ +
Sbjct: 161 VFALFWITQEAIPLLPKG--------ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRG 212
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLL---SMLNEKVRNFLARSIPAPQRLGHPDEFA 228
+A+ +A GIRVN +APG T L +K+ F + P +R G P E A
Sbjct: 213 LAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQF-GQQTPM-KRAGQPAELA 266
>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|B Chain B, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|C Chain C, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|D Chain D, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Length = 260
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 104/244 (42%), Gaps = 34/244 (13%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESV----AKELGPDVKFA 55
MLKG V +VTG SG+G L +E E V A + G V +
Sbjct: 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 56 PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
D++ E V+ V G++D+ VN AGI I ++ + + IL +N
Sbjct: 61 GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF------PTEKWDAILALN 114
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
F+ +A L H + + G G IIN AS + + AY A+K G+VG T
Sbjct: 115 LSAVFH--GTAAALPH---MKKQGF-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKV 168
Query: 176 MARDLAGAGIRVNTIAPGLFDTPL----LSMLNEK--------VRNFLARSIPA-----P 218
A + AG GI N I PG +PL +S L EK R L+ P+ P
Sbjct: 169 TALETAGQGITANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTP 228
Query: 219 QRLG 222
++LG
Sbjct: 229 EQLG 232
>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|A Chain A, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|B Chain B, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|D Chain D, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
Length = 271
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 17/231 (7%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA----KELGPDVKFAPVDVTSEE 63
L+TGG+ G+G A+ + S +E G DV E
Sbjct: 29 LITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVAKER 88
Query: 64 DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
+V G+L VN AG+ + + +L+ +R +N G+F A
Sbjct: 89 EVLAXFETVDAQLGRLSALVNNAGV-----VDQTTRVDGITLERLQRXFEINVFGSFLCA 143
Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ-VAYSASKSGIVGMTLPMARDLAG 182
R + + G G I+N +S AA G GQ V Y+A+K I TL +A+++A
Sbjct: 144 R---EAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVAT 200
Query: 183 AGIRVNTIAPGLFDTPLLSM--LNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
GIRVN + PG+ +T + + L + R+ +A +P QR G E A+ +
Sbjct: 201 EGIRVNAVRPGIIETDIHASGGLPNRARD-VAPQVPX-QRAGTAREVAEAI 249
>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium
Smegmatis
Length = 454
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 22/254 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL--PTSEGESVAKELGPDVKFAPVDV 59
L G V +VTG A G+G D+ + + VA ++G +DV
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTA--LTLDV 268
Query: 60 TSEEDVQK-AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
T+++ V K + + GK+D+ VN AGI+ + N D KR V V
Sbjct: 269 TADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANM---------DEKRWDAVIAVN 319
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
RL+ L+ + E G +I +S+A G GQ Y+ +K+G++G+ +A
Sbjct: 320 LLAPQRLTEGLVGNGTIGEGGR---VIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAP 376
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP 238
LA GI +N +APG +T + + R + R + + + G P + A+L+ + +P
Sbjct: 377 VLADKGITINAVAPGFIETKMTEAIPLATRE-VGRRLNSLFQGGQPVDVAELI-AYFASP 434
Query: 239 LIN---GEVIRIDG 249
N G IR+ G
Sbjct: 435 ASNAVTGNTIRVCG 448
>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|B Chain B, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|C Chain C, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|D Chain D, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
Length = 255
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 107/255 (41%), Gaps = 20/255 (7%)
Query: 3 KGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSE 62
+G +V GG G G AT L S + +E GP V D+
Sbjct: 7 QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL 66
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
++ + G +D+ AG+S ++ +++ + S D R VNT G F
Sbjct: 67 NEIAVLGAAAGQTLGAIDLLHINAGVS---ELEPFDQVSEASYD---RQFAVNTKGAFFT 120
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
+ LI E G I+ T+S+A G G YSASK+ +V +A +L
Sbjct: 121 VQRLTPLIREG--------GSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLP 172
Query: 183 AGIRVNTIAPGLFDTPL--LSMLNEKVR---NFLARSIPAPQRLGHPDEFAQLVQSI-IT 236
GIRVN+++PG DTP ++ + E R L +I +R G DE A+ V +
Sbjct: 173 RGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE 232
Query: 237 NPLINGEVIRIDGAL 251
G + +DG L
Sbjct: 233 ATFTTGAKLAVDGGL 247
>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
pdb|3VC7|B Chain B, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
Length = 254
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 107/255 (41%), Gaps = 20/255 (7%)
Query: 3 KGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSE 62
+G +V GG G G AT L S + +E GP V D+
Sbjct: 6 QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL 65
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNV 122
++ + G +D+ AG+S ++ +++ + S D R VNT G F
Sbjct: 66 NEIAVLGAAAGQTLGAIDLLHINAGVS---ELEPFDQVSEASYD---RQFAVNTKGAFFT 119
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAG 182
+ LI E G I+ T+S+A G G YSASK+ +V +A +L
Sbjct: 120 VQRLTPLIREG--------GSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLP 171
Query: 183 AGIRVNTIAPGLFDTPL--LSMLNEKVR---NFLARSIPAPQRLGHPDEFAQLVQSI-IT 236
GIRVN+++PG DTP ++ + E R L +I +R G DE A+ V +
Sbjct: 172 RGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE 231
Query: 237 NPLINGEVIRIDGAL 251
G + +DG L
Sbjct: 232 ATFTTGAKLAVDGGL 246
>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
pdb|1YBV|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
Length = 283
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 2 LKGVVGLVTGGASGLGK--ATXXXXXXXXXXXXLCDLPTSEGESVA--KELGPDVKFAPV 57
L+G V LVTG G+G+ A + S E VA K+ G D
Sbjct: 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
+V ED+ + FGKLD+ + +G+ F + K + ++F R+ +NT
Sbjct: 87 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS----FGHVKDV--TPEEFDRVFTINTR 140
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV----AYSASKSGIVGMT 173
G F VAR + + + + G +I SI GQ+ V YS SK I
Sbjct: 141 GQFFVAREAYKHLE--------IGGRLILMGSIT---GQAKAVPKHAVYSGSKGAIETFA 189
Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRNFLARSIPAPQRL 221
MA D+A I VN +APG T + ++ NE+V + A +R+
Sbjct: 190 RCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRV 249
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRM 253
G P + A++V + +N + G+VI IDG M
Sbjct: 250 GLPIDIARVVCFLASNDGGWVTGKVIGIDGGACM 283
>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|B Chain B, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|C Chain C, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|D Chain D, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
Length = 260
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 103/244 (42%), Gaps = 34/244 (13%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESV----AKELGPDVKFA 55
MLKG V +VTG SG+G L +E E V A + G V +
Sbjct: 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 56 PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
D++ E V+ V G++D+ VN AGI I ++ + + IL +N
Sbjct: 61 GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF------PTEKWDAILALN 114
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
F+ +A L H + + G G IIN AS + + AY A+K G+VG T
Sbjct: 115 LSAVFH--GTAAALPH---MKKQGF-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKV 168
Query: 176 MARDLAGAGIRVNTIAPGLFDTPL----LSMLNEK--------VRNFLARSIPA-----P 218
A + AG GI N I PG PL +S L EK R L+ P+ P
Sbjct: 169 TALETAGQGITANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTP 228
Query: 219 QRLG 222
++LG
Sbjct: 229 EQLG 232
>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1DOH|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1G0N|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0N|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0O|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|C Chain C, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|D Chain D, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
Length = 283
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 2 LKGVVGLVTGGASGLGK--ATXXXXXXXXXXXXLCDLPTSEGESVA--KELGPDVKFAPV 57
L+G V LVTG G+G+ A + S E VA K+ G D
Sbjct: 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
+V ED+ + FGKLD+ + +G+ F + K + ++F R+ +NT
Sbjct: 87 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS----FGHVKDV--TPEEFDRVFTINTR 140
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV----AYSASKSGIVGMT 173
G F VAR + + + + G +I SI GQ+ V YS SK I
Sbjct: 141 GQFFVAREAYKHLE--------IGGRLILMGSIT---GQAKAVPKHAVYSGSKGAIETFA 189
Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRNFLARSIPAPQRL 221
MA D+A I VN +APG T + ++ NE+V + A +R+
Sbjct: 190 RCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRV 249
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRM 253
G P + A++V + +N + G+VI IDG M
Sbjct: 250 GLPIDIARVVCFLASNDGGWVTGKVIGIDGGACM 283
>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|B Chain B, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|C Chain C, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|D Chain D, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
Length = 264
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 19/255 (7%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDV----KFAPVDVTSEE 63
L+T G GLGK + + KE DV +F DVT +E
Sbjct: 11 LITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKE 70
Query: 64 DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
D+ K V FGK+D +N AG +F K + D++ ++ N F++
Sbjct: 71 DLHKIVEEAMSHFGKIDFLINNAGPY----VFERKKLVDYEEDEWNEMIQGNLTAVFHLL 126
Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYE--GQSGQVAYSASKSGIVGMTLPMARDLA 181
+L ++ + G IIN A G + A++A+K G+V +T +A + A
Sbjct: 127 KLVVPVMRKQNF------GRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEA 180
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PL 239
GI N + PG + ++ R + P R G ++ A+ + + + +
Sbjct: 181 EYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIG-RSGTGEDIARTISFLCEDDSDM 239
Query: 240 INGEVIRIDGALRMI 254
I G +I + GA+ +I
Sbjct: 240 ITGTIIEVTGAVDVI 254
>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|B Chain B, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|C Chain C, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|D Chain D, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
Length = 293
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 102/250 (40%), Gaps = 22/250 (8%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGP----DVKFAPVDVTSEE 63
LVTGG G+G+ + E SV ELG +V +DV+
Sbjct: 45 LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPG 104
Query: 64 DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT-FNV 122
A D+FG LDV AGI F + + + +L VN GT + V
Sbjct: 105 SCADAARTVVDAFGALDVVCANAGI------FPEARLDTMTPEQLSEVLDVNVKGTVYTV 158
Query: 123 ARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTLPMARDLA 181
A L RG +I T+SI G G Y ASK+ +G A +LA
Sbjct: 159 QACLAPLTASG-------RGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELA 211
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--L 239
G+ VN I PG T L + E+ + +ARSIP LG P + L + T+
Sbjct: 212 PRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPM-GMLGSPVDIGHLAAFLATDEAGY 270
Query: 240 INGEVIRIDG 249
I G+ I +DG
Sbjct: 271 ITGQAIVVDG 280
>pdb|3SX2|A Chain A, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|B Chain B, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|C Chain C, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|D Chain D, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|E Chain E, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|F Chain F, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|G Chain G, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|H Chain H, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
Length = 278
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 47/266 (17%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXX---XXXLCD------LPTSEGESVA------K 46
L G V +TG A G G+A LCD P + E +A +
Sbjct: 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 47 ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
++G + DV E + A+ D G+LD+ V AGI+ + G D
Sbjct: 71 DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP------MSAGD----D 120
Query: 107 DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG----QSGQVAY 162
+ ++ VN G ++ +++ L + G G I+ +S A G G V Y
Sbjct: 121 GWHDVIDVNLTGVYHTIKVAIP-----TLVKQGTGGSIVLISSSAGLAGVGSADPGSVGY 175
Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA---PQ 219
A+K G+VG+ A LAG IRVN+I P +TP+++ NE R +LA+ A P
Sbjct: 176 VAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMIN--NEFTREWLAKMAAATDTPG 233
Query: 220 RLGH--------PDEFAQLVQSIITN 237
+G+ P++ A V ++++
Sbjct: 234 AMGNAMPVEVLAPEDVANAVAWLVSD 259
>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
pdb|3UF0|B Chain B, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 26/257 (10%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G +VTG SG+G+A L T + VA E+ A V
Sbjct: 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHV-LAWGRTDGVKEVADEIADGGGSAEAVVAD 87
Query: 62 EEDVQKAVLLCKD--SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
D++ A + ++ + ++DV VN AGI SL ++ +L VN
Sbjct: 88 LADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEV------SLGRWREVLTVNLDAA 141
Query: 120 FNVARL--SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
+ ++R +A L H + G I+ AS+ +++G AY+ASK +VG+T +A
Sbjct: 142 WVLSRSFGTAMLAHGS--------GRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALA 193
Query: 178 RDLAGAGIRVNTIAPGLF---DTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
+ AG G+ VN +APG +T L +E+ AR IPA R P++ +
Sbjct: 194 SEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITAR-IPA-GRWATPEDMVGPAVFL 251
Query: 235 ITNP--LINGEVIRIDG 249
++ ++G+V+ +DG
Sbjct: 252 ASDAASYVHGQVLAVDG 268
>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
pdb|3V2H|B Chain B, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
Length = 281
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 56 PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
P D T ++ D FG D+ VN AG+ KI ++ ++ + RI+ VN
Sbjct: 82 PADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDF------PVEQWDRIIAVN 135
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
+F+ R + + G IIN AS + AY A+K GI G+T
Sbjct: 136 LSSSFHTIRGAIPPXKKKGW------GRIINIASAHGLVASPFKSAYVAAKHGIXGLTKT 189
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLL 200
+A ++A +G+ VN+I PG TPL+
Sbjct: 190 VALEVAESGVTVNSICPGYVLTPLV 214
>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase
Family Protein From Francisella Tularensis Subsp.
Tularensis Schu S4
Length = 244
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 111/258 (43%), Gaps = 42/258 (16%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXL-CDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQ 66
LVTGG+ G+GKA + D+ S ++KF D+T ++D+
Sbjct: 8 LVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------AENLKFIKADLTKQQDIT 60
Query: 67 KAVLLCKD-SFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
+ + K+ SF + +N AGI IF+ + ++ K++L +N +
Sbjct: 61 NVLDIIKNVSFDGIFLN---AGILIKGSIFDID------IESIKKVLDLNVWSS------ 105
Query: 126 SAQLIHENKLNEDGLR--GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGA 183
I+ K E+ L+ I+ S + + AY+ SK I T +A DLA
Sbjct: 106 ----IYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKY 161
Query: 184 GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ----------RLGHPDEFAQLVQS 233
IRVNT+ PG DT L L +K N + S Q R+ P E A+LV
Sbjct: 162 QIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIF 221
Query: 234 IITN--PLINGEVIRIDG 249
++++ G +I IDG
Sbjct: 222 LLSDKSKFXTGGLIPIDG 239
>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y93|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y99|A Chain A, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|2Y99|B Chain B, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|3ZV3|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV3|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV4|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV4|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV5|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV5|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV6|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
pdb|3ZV6|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
Length = 281
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G V L+TGGASGLG+A + D + G + DV S
Sbjct: 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRS 62
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD-----FKRILLVNT 116
+D ++A C +FGK+D + AGI ++Y+ +D F I VN
Sbjct: 63 LQDQKRAAERCLAAFGKIDTLIPNAGI------WDYSTALADLPEDKIDAAFDDIFHVNV 116
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
G + + + + RG ++ T S A + G Y+A+K +VG+ M
Sbjct: 117 KGYIHAVKACLPALVSS-------RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQM 169
Query: 177 ARDLAGAGIRVNTIAPGLFDTPL 199
A +LA +RVN +APG +T L
Sbjct: 170 AFELA-PHVRVNGVAPGGMNTDL 191
>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
pdb|2ZK7|B Chain B, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
Length = 257
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 37/266 (13%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE-GESVAKELGPDVKFAPVDVT 60
L+ V +VTG + G+G+A + DL + GE+ + DVT
Sbjct: 13 LRDKVVIVTGASMGIGRAIAERFVDEGSK--VIDLSIHDPGEAKYDHI-------ECDVT 63
Query: 61 SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
+ + V+ ++ +G + V VN AGI +Y K S+ +++RI+ VN G +
Sbjct: 64 NPDQVKASIDHIFKEYGSISVLVNNAGIE------SYGKIESMSMGEWRRIIDVNLFGYY 117
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
++ + + ++ I+N +S+ A AY SK ++G+T +A D
Sbjct: 118 YASKFAIPYMIRSRDPS------IVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDY 171
Query: 181 AGAGIRVNTIAPGLFDTPLLS-----------MLNEKVRNFLARSIPAPQRLGHPDEFAQ 229
A +R N + P DTPL+ M EK + P QR+G P E A
Sbjct: 172 APL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM-QRIGKPQEVAS 229
Query: 230 LVQSIITN--PLINGEVIRIDGALRM 253
V + + I G + +DG L +
Sbjct: 230 AVAFLASREASFITGTCLYVDGGLSI 255
>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
pdb|4HP8|B Chain B, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
Length = 247
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 42/263 (15%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESV-AKELGPDVKFAPVDVT 60
L+G LVTG +GLG+A L + E V A PD +D+
Sbjct: 7 LEGRKALVTGANTGLGQAIA------------VGLAAAGAEVVCAARRAPD---ETLDII 51
Query: 61 SEEDVQKAVLL--------CKDSF--GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKR 110
+++ + LL KDSF D+ VN AGI S D+
Sbjct: 52 AKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAGI------IRRADSVEFSELDWDE 105
Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIV 170
++ VN F + A+ +L G G ++N AS+ +++G +Y+A+K G+
Sbjct: 106 VMDVNLKALFFTTQAFAK-----ELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVA 160
Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRN-FLARSIPAPQRLGHPDEF- 227
G+T +A + A GI VN IAPG +T L + RN + IPA R GH ++
Sbjct: 161 GLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPA-GRWGHSEDIA 219
Query: 228 -AQLVQSIITNPLINGEVIRIDG 249
A + S ++G ++ +DG
Sbjct: 220 GAAVFLSSAAADYVHGAILNVDG 242
>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|B Chain B, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|C Chain C, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|D Chain D, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|E Chain E, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|F Chain F, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
Length = 327
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLP---------TSEGESVAKELGPDV 52
G V LVTG +GLG+A + DL + + V +E+
Sbjct: 28 FDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRG 87
Query: 53 KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRIL 112
A + S E+ +K V D+FG++DV VN AGI + ++ + S +D+ I
Sbjct: 88 GKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGI---LRDRSFAR---ISDEDWDIIH 141
Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
V+ G+F V R + + + + K G II T+S + G GQ YSA+K G++G+
Sbjct: 142 RVHLRGSFQVTRAAWEHMKKQKY------GRIIMTSSASGIYGNFGQANYSAAKLGLLGL 195
Query: 173 TLPMARDLAGAGIRVNTIAP 192
+A + + I NTIAP
Sbjct: 196 ANSLAIEGRKSNIHCNTIAP 215
>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTD|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTE|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTE|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTX|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
pdb|2DTX|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
Length = 264
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 37/266 (13%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE-GESVAKELGPDVKFAPVDVT 60
L+ V +VTG + G+G+A + DL + GE+ + DVT
Sbjct: 6 LRDKVVIVTGASMGIGRAIAERFVDEGSK--VIDLSIHDPGEAKYDHI-------ECDVT 56
Query: 61 SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
+ + V+ ++ +G + V VN AGI +Y K S+ +++RI+ VN G +
Sbjct: 57 NPDQVKASIDHIFKEYGSISVLVNNAGIE------SYGKIESMSMGEWRRIIDVNLFGYY 110
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
++ + + ++ I+N +S+ A AY SK ++G+T +A D
Sbjct: 111 YASKFAIPYMIRSR------DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDY 164
Query: 181 AGAGIRVNTIAPGLFDTPLLS-----------MLNEKVRNFLARSIPAPQRLGHPDEFAQ 229
A +R N + P DTPL+ M EK + P QR+G P E A
Sbjct: 165 APL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM-QRIGKPQEVAS 222
Query: 230 LVQSIITN--PLINGEVIRIDGALRM 253
V + + I G + +DG L +
Sbjct: 223 AVAFLASREASFITGTCLYVDGGLSI 248
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 30/265 (11%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTS---EGESVAKELGPDVKFAPVD 58
LKG + LVTG + G+G A D+ G + K G + D
Sbjct: 32 LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCD 91
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
VT E+ +Q V + G +D+ VN AGI + F++++ ++
Sbjct: 92 VTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAA------QFRQVIDIDLNA 145
Query: 119 TFNVAR-LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
F V++ + +I + G IIN S+ + G+ AY+A+K G+ +T +A
Sbjct: 146 PFIVSKAVIPSMIKKG-------HGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIA 198
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRN--------FLARSIPAPQRLGHPDEF-- 227
+ A I+ N I PG TP + L E ++ F+ PA R G ++
Sbjct: 199 SEYGEANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAA-RWGEAEDLMG 257
Query: 228 -AQLVQSIITNPLINGEVIRIDGAL 251
A + S +N +NG ++ +DG +
Sbjct: 258 PAVFLASDASN-FVNGHILYVDGGI 281
>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|B Chain B, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|C Chain C, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|D Chain D, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
Length = 319
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLP---------TSEGESVAKELGPDV 52
G V LVTG GLG+A + DL +S + V +E+
Sbjct: 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66
Query: 53 KFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRIL 112
A + S E +K V D+FG++DV VN AGI + ++++ + D +R+
Sbjct: 67 GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGI---LRDRSFSRISDEDWDIIQRVH 123
Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
L G+F V R A H K N G II TAS + G GQ YSA+K G++G+
Sbjct: 124 LR---GSFQVTR--AAWDHXKKQN----YGRIIXTASASGIYGNFGQANYSAAKLGLLGL 174
Query: 173 TLPMARDLAGAGIRVNTIAP 192
+ + I NTIAP
Sbjct: 175 ANTLVIEGRKNNIHCNTIAP 194
>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|B Chain B, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|C Chain C, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|D Chain D, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
Length = 280
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 29/228 (12%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-----------PTS-----EGESVA 45
L+G V +TG A G G++ CD+ P S E +
Sbjct: 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 46 KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
++ G +DV + +++ V + FG+LDV V AG+ +++
Sbjct: 73 EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTD------ 126
Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
+ + ++ VN GT+ R + + E G G I+ +S A + G YSAS
Sbjct: 127 EQWDTVIGVNLTGTWRTLRATVP-----AMIEAGNGGSIVVVSSSAGLKATPGNGHYSAS 181
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR 213
K G+ +T +A +L GIRVN+I P +TP++ E + AR
Sbjct: 182 KHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE--PEAMMEIFAR 227
>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|B Chain B, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|C Chain C, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|D Chain D, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|E Chain E, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|F Chain F, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|G Chain G, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|H Chain H, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|3VDR|A Chain A, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|B Chain B, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|C Chain C, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|D Chain D, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDQ|A Chain A, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|B Chain B, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|C Chain C, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|D Chain D, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
Length = 260
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEG-----ESVAKELGPDVKFA 55
MLKG +VTG SG+G A + E ++ + G +
Sbjct: 1 MLKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYL 60
Query: 56 PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
D++ + + + ++ G LD+ VN AGI I + +D + I+ +N
Sbjct: 61 NADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEF------PVDKWNAIIALN 114
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
F+ + ++ + G IIN AS + AY A+K G+VG+T
Sbjct: 115 LSAVFHGTAAALPIMQKQGW------GRIINIASAHGLVASVNKSAYVAAKHGVVGLTKV 168
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKV------------RNFLARSIPA-----P 218
A + AG GI N I PG TPL+ E + R LA P+ P
Sbjct: 169 TALENAGKGITCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTP 228
Query: 219 QRLG 222
++LG
Sbjct: 229 EQLG 232
>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|B Chain B, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|C Chain C, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|D Chain D, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
Length = 247
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 22/243 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
L+G V L+TG +SG+G+AT + + ++ EL G V +D
Sbjct: 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNT 116
V + V AV ++ G LD+ VN AGI G V D D+ R++ N
Sbjct: 65 VADRQGVDAAVASTVEALGGLDILVNNAGIMLL--------GPVEDADTTDWTRMIDTNL 116
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
+G + R + + +K G ++ +SIA Y A+K G+ + +
Sbjct: 117 LGLMYMTRAALPHLLRSK-------GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETL 169
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEK-VRNFLARSIPAPQRLGHPDEFAQLVQSII 235
+++ G+RV I PG DT L + + + I ++L D A+ V+ +
Sbjct: 170 RQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQD-IAEAVRYAV 228
Query: 236 TNP 238
T P
Sbjct: 229 TAP 231
>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 266
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 22/256 (8%)
Query: 1 MLKGVVGLVTGGA-SGLGKATXXXXXXXXXXXXLCDLPTSE-GESVAK--ELG-PDVKFA 55
+LKG V LVT A +G+G T + D GE+ + +LG V+
Sbjct: 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAV 78
Query: 56 PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
DVTS E V + + G+LDV VN AG+ + + +++ R+L V
Sbjct: 79 VCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTD------EEWDRVLNVT 132
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
R A L + ++ G VI+N AS+ + Q Q Y+A+K+G++ +T
Sbjct: 133 LTSVMRATR--AALRYFRGVDHGG---VIVNNASVLGWRAQHSQSHYAAAKAGVMALTRC 187
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR--SIPAPQRLGHPDEFAQLVQS 233
A + G+R+N ++P + L + L R S A R P E A +
Sbjct: 188 SAIEAVEFGVRINAVSPSIARHKFLEKTSSS--ELLDRLASDEAFGRAAEPWEVAATIAF 245
Query: 234 IITN--PLINGEVIRI 247
+ ++ + GEV+ +
Sbjct: 246 LASDYSSYMTGEVVSV 261
>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|B Chain B, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|C Chain C, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|D Chain D, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
Length = 257
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAG--ISCAFKIFNYNKGTVHSLDDFKRILLVN 115
DV + +D+QK + + FG++D+ +N A C + S++ + ++ +
Sbjct: 63 DVRNTDDIQKXIEQIDEKFGRIDILINNAAGNFICPAEDL--------SVNGWNSVINIV 114
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
GTF +Q I + + E G++G IIN + A++ G + +A+K+G++ T
Sbjct: 115 LNGTF----YCSQAIGKYWI-EKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKT 169
Query: 176 MARDLA-GAGIRVNTIAPGLFDTPLLS---MLNEKVRNFLARSIPAPQRLGHPDEFAQLV 231
+A + GIRVN IAPG + + ++E+ +S+P RLG P+E A L
Sbjct: 170 LAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEXAKRTIQSVPLG-RLGTPEEIAGLA 228
Query: 232 QSIITNP--LINGEVIRIDGALRM 253
+ ++ ING DG +
Sbjct: 229 YYLCSDEAAYINGTCXTXDGGQHL 252
>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHI|B Chain B, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHH|A Chain A, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1AHH|B Chain B, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1FMC|A Chain A, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
pdb|1FMC|B Chain B, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
Length = 255
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 20/254 (7%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKE---LGPDVKFAPVD 58
L G ++TG +G+GK + D+ V E LG D
Sbjct: 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
+TSE+++ GK+D+ VN AG K F+ + DF+R +N
Sbjct: 69 ITSEQELSALADFAISKLGKVDILVNNAG-GGGPKPFDM------PMADFRRAYELNVFS 121
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
F++++L A + +N GVI+ S+AA +Y++SK+ + MA
Sbjct: 122 FFHLSQLVAPEMEKNG------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAF 175
Query: 179 DLAGAGIRVNTIAPG-LFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT- 236
DL IRVN IAPG + L S++ ++ + + P +RLG P + A + +
Sbjct: 176 DLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI-RRLGQPQDIANAALFLCSP 234
Query: 237 -NPLINGEVIRIDG 249
++G+++ + G
Sbjct: 235 AASWVSGQILTVSG 248
>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|B Chain B, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|C Chain C, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|D Chain D, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|E Chain E, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|F Chain F, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|G Chain G, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|H Chain H, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
Length = 256
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 20/223 (8%)
Query: 33 LCDLPTSEGESVA---KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGIS 89
+ DL + E+VA ++ G +VT E+ + + D FGK+ V VN AG
Sbjct: 41 VTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAG-G 99
Query: 90 CAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS 149
K F+ + DF+ +N F +++L+A H K G I+N +S
Sbjct: 100 GGPKPFDM------PMSDFEWAFKLNLFSLFRLSQLAAP--HMQKAG----GGAILNISS 147
Query: 150 IAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDT-PLLSMLNEKVR 208
+A +Y +SK+ + +T +A D+ GIRVN IAPG T L ++L ++
Sbjct: 148 MAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIE 207
Query: 209 NFLARSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDG 249
+ + P RLG + A + + I+G+V+ + G
Sbjct: 208 RAMLKHTPL-GRLGEAQDIANAALFLCSPAAAWISGQVLTVSG 249
>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM
SINORHIZOBIUM Meliloti 1021
Length = 271
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 109/260 (41%), Gaps = 33/260 (12%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE-GESVAKEL---GPDVKFAPV 57
L G VTGG+ G+G A L + +E ++V E+ G
Sbjct: 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
D E +++A+ ++ G LD+ VN AGI + + ++ DF + VN
Sbjct: 89 DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEET------TVADFDEVXAVNFR 142
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVII--NTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
F R +++ + DG R + I N A + + G S YSASK+ + G+T
Sbjct: 143 APFVAIRSASRHLG------DGGRIITIGSNLAELVPWPGIS---LYSASKAALAGLTKG 193
Query: 176 MARDLAGAGIRVNTIAPGLFDT---PLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQ 232
+ARDL GI VN + PG DT P E R +A G P + A LV
Sbjct: 194 LARDLGPRGITVNIVHPGSTDTDXNPADGDHAEAQRERIATG-----SYGEPQDIAGLV- 247
Query: 233 SIITNP---LINGEVIRIDG 249
+ + P + G + IDG
Sbjct: 248 AWLAGPQGKFVTGASLTIDG 267
>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
Length = 277
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 27/216 (12%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCD----LPT------------SEGESVA 45
L+G V +TG A G G+A D LP+ SE +
Sbjct: 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 46 KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
+ + A VD + ++K V + G+LD+ V AG++ +
Sbjct: 69 EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITP------ 122
Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
+DF+ ++ +N GT+N A ++ E G G II +S A + Q + Y+AS
Sbjct: 123 EDFRDVMDINVTGTWNTVMAGAP-----RIIEGGRGGSIILISSAAGMKMQPFMIHYTAS 177
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
K + G+ A +L IRVN++ PG +TP+ S
Sbjct: 178 KHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGS 213
>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From
Arabidopsis Thaliana Gene At1g07440
pdb|2Q45|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Putative Tropinone Reductase From Arabidopsis Thaliana
Gene At1g07440
Length = 266
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 20/257 (7%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLC---DLPTSEGESVAKELGPDVKFAPVD 58
LK LVTGG G+G A C + +E S ++ G V + D
Sbjct: 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71
Query: 59 VTSEEDVQKAVLLCKDSFG-KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
+ + +K + FG KLD+ +N G + +Y + +DF + N
Sbjct: 72 ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDY------TAEDFSFHISTNLE 125
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
+++++L+ L+ + G II +SIA S YSA+K + + +A
Sbjct: 126 SAYHLSQLAHPLLKASGC------GNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 179
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
+ A GIR N +AP + TPL + + + S R G P+E + LV + +
Sbjct: 180 CEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLV-AFLCM 238
Query: 238 P---LINGEVIRIDGAL 251
P I G+ I +DG L
Sbjct: 239 PAASYITGQTICVDGGL 255
>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|B Chain B, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|C Chain C, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|D Chain D, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
Length = 247
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 22/243 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
L+G V L+TG +SG+G+AT + + ++ EL G V +D
Sbjct: 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNT 116
V + V AV ++ G LD+ VN AGI G V D D+ R + N
Sbjct: 65 VADRQGVDAAVASTVEALGGLDILVNNAGIXLL--------GPVEDADTTDWTRXIDTNL 116
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
+G R + + +K G ++ +SIA Y A+K G+ + +
Sbjct: 117 LGLXYXTRAALPHLLRSK-------GTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETL 169
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLSMLNEK-VRNFLARSIPAPQRLGHPDEFAQLVQSII 235
+++ G+RV I PG DT L + + + I ++L D A+ V+ +
Sbjct: 170 RQEVTERGVRVVVIEPGTTDTELRGHITHTATKEXYEQRISQIRKLQAQD-IAEAVRYAV 228
Query: 236 TNP 238
T P
Sbjct: 229 TAP 231
>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From
Pseudomonas Sp. Lb400
Length = 277
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
LKG L+TGGASGLG+A + D + + G +V DV S
Sbjct: 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRS 62
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV----HSLD-DFKRILLVNT 116
ED ++A C FGK+D + AG I++Y+ V SLD F + +N
Sbjct: 63 LEDQKQAASRCVARFGKIDTLIPNAG------IWDYSTALVDLPEESLDAAFDEVFHINV 116
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
G + + + + RG +I T S A + G Y+A+K IVG+ +
Sbjct: 117 KGYIHAVKACLPALVAS-------RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVREL 169
Query: 177 ARDLAGAGIRVNTIAPGLFDTPL 199
A +LA +RVN + G ++ L
Sbjct: 170 AFELA-PYVRVNGVGSGGINSDL 191
>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy
Benzoate Dehydrogenase
Length = 250
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 95/243 (39%), Gaps = 48/243 (19%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFA------PVDVTS 61
VTG G+G AT E+ AK G D F +V
Sbjct: 11 WVTGAGKGIGYATALAFV----------------EAGAKVTGFDQAFTQEQYPFATEVMD 54
Query: 62 EEDVQKAVLLCKDSFG---KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
D + +C+ +LD VN AGI S +D+++ VN G
Sbjct: 55 VADAAQVAQVCQRLLAETERLDALVNAAGI------LRMGATDQLSKEDWQQTFAVNVGG 108
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
FN+ + + + G I+ AS AA+ + G AY ASK+ + + L +
Sbjct: 109 AFNLFQQTMNQFRRQR------GGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL 162
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSML-------NEKVRNF---LARSIPAPQRLGHPDEFA 228
+LAG+G+R N ++PG DT + L +++R F IP ++ P E A
Sbjct: 163 ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLG-KIARPQEIA 221
Query: 229 QLV 231
+
Sbjct: 222 NTI 224
>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GLO|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GVX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
Length = 258
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 86/215 (40%), Gaps = 36/215 (16%)
Query: 50 PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFK 109
P + PV++ + + AV +FG+LD VN AG++ + V SL+ +
Sbjct: 55 PRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLE--R 112
Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGI 169
++ + + V L A RG I+N +S A GQ Y ASK
Sbjct: 113 NLIHYYAMAHYCVPHLKAT------------RGAIVNISSKTAVTGQGNTSGYCASKGAQ 160
Query: 170 VGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLAR-------------SIP 216
+ +T A L G+RVN + P TPL RN++A +P
Sbjct: 161 LALTREWAVALREHGVRVNAVIPAEVMTPLY-------RNWIATFEDPEAKLAEIAAKVP 213
Query: 217 APQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDG 249
+R PDE A +++ GE + +DG
Sbjct: 214 LGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDG 248
>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus
Thermophilus Hb8
pdb|2EKP|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|B Chain B, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|C Chain C, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|D Chain D, Structure Of Tt0495 Protein From Thermus Thermophilus
Length = 239
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 25/248 (10%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
LVTGG+ G+G+A + + E A+ LG P+ E+D K
Sbjct: 6 LVTGGSRGIGRAIAEALVARGYRVAIA---SRNPEEAAQSLGA----VPLPTDLEKDDPK 58
Query: 68 AVL-LCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVH-SLDDFKRILLVNTVGTFNVARL 125
++ ++ G L V V+ A + N K + S ++++R+L ++ +VA L
Sbjct: 59 GLVKRALEALGGLHVLVHAAAV-------NVRKPALELSYEEWRRVLYLH----LDVAFL 107
Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
AQ + R + I + + G AY+ +K+ ++G+T +A++ A GI
Sbjct: 108 LAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGI 167
Query: 186 RVNTIAPGLFDTPLLSML--NEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLIN 241
RVN + PG +T L N ++ + IP R P+E A++ + + +
Sbjct: 168 RVNLLCPGYVETEFTLPLRQNPELYEPITARIPM-GRWARPEEIARVAAVLCGDEAEYLT 226
Query: 242 GEVIRIDG 249
G+ + +DG
Sbjct: 227 GQAVAVDG 234
>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|C Chain C, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|D Chain D, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|3LQF|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|2WSB|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
Length = 254
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 21/255 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
L G VTG SG+G L D + + A+ELG V V +
Sbjct: 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVT 68
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
+ + A ++ + + VN AGI+ + T +++++ VN G F
Sbjct: 69 DAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDAT------WRQVMAVNVDGMFW 122
Query: 122 VARLSAQLIHENK----LNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
+R + + +N + G I+N A+ +Y ASK + +T +A
Sbjct: 123 ASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFAS--------SYMASKGAVHQLTRALA 174
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQ-RLGHPDEF--AQLVQSI 234
+ AG G+RVN +APG T + + E+ F P R G P E A L +
Sbjct: 175 AEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLAS 234
Query: 235 ITNPLINGEVIRIDG 249
+ G ++ +DG
Sbjct: 235 PAASYVTGAILAVDG 249
>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of
Caenorhabditis Elegans In The Apo-Form
Length = 278
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 29/268 (10%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL------GPDVKFAPVDV 59
V ++TG ++G+G+AT + E +++ +V DV
Sbjct: 8 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 67
Query: 60 TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
T++ + + FGKLD+ VN AG A GT S++ + L +N
Sbjct: 68 TTDAGQDEILSTTLGKFGKLDILVNNAG--AAIPDSQSKTGTAQSIESYDATLNLNLRSV 125
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTLPMAR 178
+ + + + K G I+N +SIA+ YS +K+ I T A
Sbjct: 126 IALTKKAVPHLSSTK-------GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAI 178
Query: 179 DLAGAGIRVNTIAPGLFDTPL---LSMLNEKVRNF------LARSIPAPQRLGHPDEFAQ 229
DL GIRVN+I+PGL T + M E + F + +PA +G P + A+
Sbjct: 179 DLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG-VMGQPQDIAE 237
Query: 230 LVQSII---TNPLINGEVIRIDGALRMI 254
++ + T+ I G + +DG +I
Sbjct: 238 VIAFLADRKTSSYIIGHQLVVDGGSSLI 265
>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
pdb|3TJR|B Chain B, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
G +VTGGASG+G AT L D+ E L G D D
Sbjct: 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 59 VTSEEDVQKAVLLCKDSF---GKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
V + + V L ++F G +DV + AGI A + N DD++ ++ ++
Sbjct: 89 V---RHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNH------DDWRWVIDID 139
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
G+ + + A L +L E G G I TAS A +G Y +K G+VG+
Sbjct: 140 LWGSIHA--VEAFL---PRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAET 194
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVR 208
+AR++ GI V+ + P + +T L+S +E++R
Sbjct: 195 LAREVKPNGIGVSVLCPMVVETKLVSN-SERIR 226
>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|B Chain B, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|C Chain C, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|D Chain D, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
Length = 280
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 13/210 (6%)
Query: 48 LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD 107
LG V F D+ Q V FG++D VN AGI+ + + ++
Sbjct: 77 LGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVR----DDFLDLKPEN 132
Query: 108 FKRILLVNTVGT--FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
F I+ VN GT F A L A L + + + IIN S++A ++ Y S
Sbjct: 133 FDTIVGVNLRGTVFFTQAVLKAXLASDARASRS-----IINITSVSAVXTSPERLDYCXS 187
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPD 225
K+G+ + +A LA GI V + PG+ + + ++ K + + +R G P+
Sbjct: 188 KAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDXTAAVSGKYDGLIESGLVPXRRWGEPE 247
Query: 226 EFAQLVQSIITNP--LINGEVIRIDGALRM 253
+ +V + G VI+ DG L +
Sbjct: 248 DIGNIVAGLAGGQFGFATGSVIQADGGLSI 277
>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE
FROM Bacillus Anthracis Str. Ames Ancestor
pdb|3T4X|B Chain B, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE
FROM Bacillus Anthracis Str. Ames Ancestor
Length = 267
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 39/273 (14%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELG---PDVKFAPV 57
LKG LVTG +G+GKA + KE+ PD PV
Sbjct: 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 58 --DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
D+ +E+ Q + + + K+D+ +N GI + F+ +D+ ++ VN
Sbjct: 67 VADLGTEQGCQDVI----EKYPKVDILINNLGIFEPVEYFDIPD------EDWFKLFEVN 116
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
+ R + E K G +I AS AA YSA+K+ + ++
Sbjct: 117 IXSGVRLTRSYLKKXIERK------EGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRS 170
Query: 176 MARDLAGAGIRVNTIAPGL-----FDTPLLSM-------LNEKVRNFLARSIPAP--QRL 221
+A G + VNTI PG +T L S+ + E + F + P QRL
Sbjct: 171 LAELTTGTNVTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRL 230
Query: 222 GHPDEFAQLVQSIITNPL---INGEVIRIDGAL 251
P+E A LV + +++PL ING +RIDG L
Sbjct: 231 IRPEEIAHLV-TFLSSPLSSAINGSALRIDGGL 262
>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From
Oenococcus Oeni Psu-1
pdb|3KSU|B Chain B, Crystal Structure Of Short-Chain Dehydrogenase From
Oenococcus Oeni Psu-1
Length = 262
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAK------ELGPDVKFA 55
LK V ++ GG LG T L + ++ K + G V
Sbjct: 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY 68
Query: 56 PVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVN 115
D+++EE+V K + FGK+D+ +N G I ++ ++D + N
Sbjct: 69 QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMD-----TINN 123
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
V F + + + +N +G + I T+ +AAY G Y+ +K+ + T
Sbjct: 124 KVAYFFIKQAAKH------MNPNG-HIITIATSLLAAYTGFYS--TYAGNKAPVEHYTRA 174
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
+++L I VN IAPG DT K +S +L ++ A +++ +
Sbjct: 175 ASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLT 234
Query: 236 TN-PLINGEVIRIDG 249
T+ ING+ I +G
Sbjct: 235 TDGWWINGQTIFANG 249
>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|G Chain G, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|I Chain I, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
Length = 280
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 107/263 (40%), Gaps = 32/263 (12%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPV---- 57
L+G + +VTG +SG+G+A + T+ + EL ++
Sbjct: 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVV----TARNGNALAELTDEIAGGGGEAAA 61
Query: 58 ---DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL--DDFKRIL 112
DV E + V L FG LD N AG A G + SL + ++ L
Sbjct: 62 LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAM-------GEISSLSVEGWRETL 114
Query: 113 LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
N F A+ I G + ++ + G +G Y+ASK+G++G+
Sbjct: 115 DTNLTSAFLAAKYQVPAIAAL-----GGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGL 169
Query: 173 TLPMARDLAGAGIRVNTIAPGLFDTPL----LSMLNEKVRNFLARSIPAPQRLGHPDEFA 228
+A +L GIRVN + PG DTP L + R F+ + A +R+ P+E A
Sbjct: 170 VQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFV-EGLHALKRIARPEEIA 228
Query: 229 QLVQSIITN--PLINGEVIRIDG 249
+ + ++ + G + DG
Sbjct: 229 EAALYLASDGASFVTGAALLADG 251
>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
Length = 280
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAG--ISCAFKIFNYNKGTVHSLDDFKRILLVN 115
DVT+E+ + + FGK+DV VN AG I AF GT +D + + L +N
Sbjct: 66 DVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFG----TTGTDQGIDIYHKTLKLN 121
Query: 116 TVGTFNVAR-LSAQLIHENKLNEDGLRGVIINTASI-AAYEGQSGQVAYSASKSGIVGMT 173
+ + + L+ +G I+N +SI A + Q + Y+ +K+ + T
Sbjct: 122 LQAVIEMTKKVKPHLVAS--------KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYT 173
Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLLSML------NEKVRNFLA---RSIPAPQRLGHP 224
A DLA GIRVN+++PG+ +T + + ++K NF+A IP G P
Sbjct: 174 RSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGA-AGKP 232
Query: 225 DEFAQLVQSIITNPL---INGEVIRIDGALRMI 254
+ A ++ + L I G+ I DG ++
Sbjct: 233 EHIANIILFLADRNLSFYILGQSIVADGGTSLV 265
>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|B Chain B, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|C Chain C, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|D Chain D, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
Length = 261
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
G ++ +SIAA+ G Y+ SK+ ++G+T +A +LA IRVN +APGL T
Sbjct: 145 GSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSR 204
Query: 202 MLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDG 249
ML +K + + +RLG P++ A +V + + I GE + + G
Sbjct: 205 MLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETVVVGG 255
>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|B Chain B, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|C Chain C, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|D Chain D, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
Length = 250
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 27/202 (13%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFA------PVDV 59
+ ++TG + G+G L E V E+ K P+D+
Sbjct: 9 LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDI 68
Query: 60 TSEEDVQKAVLLCKD---SFGKLDVNVNCAGISCAFKIFNYNKGTVHS-LDDFKRILLVN 115
T D KA KD +G +D+ VN A + G++ +D+F++I +N
Sbjct: 69 T---DCTKADTEIKDIHQKYGAVDILVNAAA--------XFXDGSLSEPVDNFRKIXEIN 117
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLP 175
+ + + + ++ K G I N AS AA G + Y ++K ++G+
Sbjct: 118 VIAQYGILKTVTEIXKVQK------NGYIFNVASRAAKYGFADGGIYGSTKFALLGLAES 171
Query: 176 MARDLAGAGIRVNTIAPGLFDT 197
+ R+LA GIRV T+ PG +T
Sbjct: 172 LYRELAPLGIRVTTLCPGWVNT 193
>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|B Chain B, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|C Chain C, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|D Chain D, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|E Chain E, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|F Chain F, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|G Chain G, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|H Chain H, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
Length = 266
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 26/263 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE----GESVAKELGPDVKFAPV 57
L G L+TG G+G L SE ++ ++ G DV +
Sbjct: 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
D+ + + ++FG LDV VN AGIS + + + F + VN
Sbjct: 78 DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQL------FDATIAVN-- 129
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
L A + + + G G II AS AA AY SK+G+V T +A
Sbjct: 130 --LRAPALLASAVGKAMVAA-GEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLA 186
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQR--LGH---PDEFAQLVQ 232
R+L GIR N++ P T +L+ + ++V A+S P R LG P E + V
Sbjct: 187 RELGPHGIRANSVCP----TVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVV 242
Query: 233 SIITNP--LINGEVIRIDGALRM 253
+ ++ +ING I +DG M
Sbjct: 243 WLASDAASMINGVDIPVDGGYTM 265
>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|B Chain B, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|C Chain C, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|D Chain D, Carbonyl Reductase Complexed With Nadph And 2-Propanol
Length = 244
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 22/236 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
G+ LVTG G+G+ T S+ S+AKE P ++ VD+
Sbjct: 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-PGIEPVCVDLGD 63
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFN 121
+ +KA+ G +D+ VN A + K + F R VN F
Sbjct: 64 WDATEKAL----GGIGPVDLLVNNAALVIMQPFLEVTK------EAFDRSFSVNLRSVFQ 113
Query: 122 VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLA 181
V+ Q++ + +N G+ G I+N +S+ A+ + YS++K + +T MA +L
Sbjct: 114 VS----QMVARDMINR-GVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG 168
Query: 182 GAGIRVNTIAPGLFDTPLLSMLNEKVRN--FLARSIPAPQRLGHPDEFAQLVQSII 235
IRVN++ P T +L+ + +KV AR + L E +V SI+
Sbjct: 169 PHKIRVNSVNP----TVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSIL 220
>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|B Chain B, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|C Chain C, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|D Chain D, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
Length = 286
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 105/269 (39%), Gaps = 35/269 (13%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-------------PTSEGESVA--- 45
++G V VTG A G G++ D+ P S E +A
Sbjct: 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 46 ---KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV 102
K + A VDV + ++ AV + G+LD+ V AGI +
Sbjct: 69 DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKT---- 124
Query: 103 HSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAY 162
S +D+ ++ +N G + + A + H + G G II T+S+ + Y
Sbjct: 125 -SEEDWTEMIDINLAGVWKTVK--AGVPH---MIAGGRGGSIILTSSVGGLKAYPHTGHY 178
Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLG 222
A+K G+VG+ +L IRVN++ P TP+L NE + P
Sbjct: 179 VAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLH--NEGTFKMFRPDLENPG--- 233
Query: 223 HPDEFAQLVQSIITNPLINGEVIRIDGAL 251
PD+ A + Q T P+ E I I A+
Sbjct: 234 -PDDMAPICQMFHTLPIPWVEPIDISNAV 261
>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
(Apo Form) From Fungus Cochliobolus Lunatus
pdb|3QWF|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|E Chain E, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|F Chain F, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|G Chain G, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|H Chain H, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWI|A Chain A, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|B Chain B, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|C Chain C, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|D Chain D, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWH|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
Length = 270
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 32/266 (12%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESVAKE---LGPDVKFAPV 57
L G V LVTG G+G A + T + E V E LG D
Sbjct: 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
D+ ++ K FG LD+ V+ +G+ F + K + ++F R+ +NT
Sbjct: 76 DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS----FGHLKDV--TEEEFDRVFSLNTR 129
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
G F VAR + + L E G +++ +++ + YS SK + +
Sbjct: 130 GQFFVAREAYR-----HLTEGGR--IVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFS 182
Query: 178 RDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRNFLARSIPAPQRLGHPD 225
+D I VN +APG T + S E+ + A + P R G P
Sbjct: 183 KDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL-HRNGWPQ 241
Query: 226 EFAQLVQSIITN--PLINGEVIRIDG 249
+ A +V +++ +NG+V+ +DG
Sbjct: 242 DVANVVGFLVSKEGEWVNGKVLTLDG 267
>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid
Dehydrogenase From Comamonas Testosteroni, A Member Of
The Short Chain DehydrogenaseREDUCTASE FAMILY
pdb|1FJH|B Chain B, The Crystal Structure Of 3-Alpha-Hydroxysteroid
Dehydrogenase From Comamonas Testosteroni, A Member Of
The Short Chain DehydrogenaseREDUCTASE FAMILY
pdb|1FK8|A Chain A, The Crystal Structure Of The Binary Complex With Nad Of 3-
Alpha-Hydroxysteroid Dehydrogenase From Comamonas
Testosteroni, A Member Of The Short Chain
DehydrogenaseREDUCTASE FAMILY
pdb|1FK8|B Chain B, The Crystal Structure Of The Binary Complex With Nad Of 3-
Alpha-Hydroxysteroid Dehydrogenase From Comamonas
Testosteroni, A Member Of The Short Chain
DehydrogenaseREDUCTASE FAMILY
Length = 257
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 48 LGPDVKFAPV--DVTSEEDVQKAV--LLCKDSFGKLDVNVNCAGISCAFKIF------NY 97
+G D++ A V D+++ E ++A+ +L K S G +D V CAG+ K+ NY
Sbjct: 29 VGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKG-MDGLVLCAGLGPQTKVLGNVVSVNY 87
Query: 98 NKGTVHSLDDFKRIL---------LVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTA 148
G +D F L ++++V + ++A L + E+ I+ A
Sbjct: 88 F-GATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHA 146
Query: 149 SIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS--MLNEK 206
Q G +AY+ SK+ + A AG+R+NTIAPG +TPLL + + +
Sbjct: 147 G-----EQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR 201
Query: 207 VRNFLARSIPAPQRLGHPDEFAQLVQSIIT--NPLINGEVIRIDGAL 251
+A+ +P R P E A ++ +++ ++G I IDG +
Sbjct: 202 YGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248
>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6
pdb|2AG5|B Chain B, Crystal Structure Of Human Dhrs6
pdb|2AG5|C Chain C, Crystal Structure Of Human Dhrs6
pdb|2AG5|D Chain D, Crystal Structure Of Human Dhrs6
Length = 246
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 38/234 (16%)
Query: 36 LPTSEGESVAKELG--PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFK 93
+ T ES +EL P ++ +DVT ++ + + + +LDV N AG
Sbjct: 34 IATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFA----NEVERLDVLFNVAGF----- 84
Query: 94 IFNYNKGTVHSLD----DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTAS 149
+ GTV + DF L V ++ A L L ++ G IIN +S
Sbjct: 85 ---VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKS--------GNIINMSS 133
Query: 150 IAA-YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML----- 203
+A+ +G + YS +K+ ++G+T +A D GIR N + PG DTP L
Sbjct: 134 VASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG 193
Query: 204 -NEKVRN-FLARSIPAPQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGALRM 253
E+ RN FL R R +E A L + ++ + G + IDG +
Sbjct: 194 NPEEARNDFLKRQKTG--RFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL 245
>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid
Dehydrogenase (Y167f Mutated Form) From Fungus
Cochliobolus Lunatus
Length = 270
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 32/266 (12%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL-PTSEGESVAKE---LGPDVKFAPV 57
L G V LVTG G+G A + T + E V E LG D
Sbjct: 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
D+ ++ K FG LD+ V+ +G+ F + K + ++F R+ +NT
Sbjct: 76 DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS----FGHLKDV--TEEEFDRVFSLNTR 129
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
G F VAR + + L E G +++ +++ + +S SK + +
Sbjct: 130 GQFFVAREAYR-----HLTEGGR--IVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFS 182
Query: 178 RDLAGAGIRVNTIAPGLFDTPLL------------SMLNEKVRNFLARSIPAPQRLGHPD 225
+D I VN +APG T + S E+ + A + P R G P
Sbjct: 183 KDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL-HRNGWPQ 241
Query: 226 EFAQLVQSIITN--PLINGEVIRIDG 249
+ A +V +++ +NG+V+ +DG
Sbjct: 242 DVANVVGFLVSKEGEWVNGKVLTLDG 267
>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
Length = 299
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 2 LKGVVGLVTGGASGLGKA---TXXXXXXXXXXXXLCD------LPTSEGESVAKE----- 47
++G V +TG A G G++ T +C LP S + +A+
Sbjct: 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 48 -LGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNV-NCAGISCAFKIFNYNKGTVHSL 105
LG + + VDV + +Q AV G+LD+ + N A S ++ + T
Sbjct: 86 ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKT---- 141
Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
++ ++ VN G + AR++ I K G I+ T+SI G Y AS
Sbjct: 142 --WRDMIDVNLNGAWITARVAIPHIMAGKRG-----GSIVFTSSIGGLRGAENIGNYIAS 194
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE 205
K G+ G+ MA +L IRVN + P TP+L LNE
Sbjct: 195 KHGLHGLMRTMALELGPRNIRVNIVCPSSVATPML--LNE 232
>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
Length = 263
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 30/208 (14%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLC----DLPTSEGESVAKELGPDVKFAPV 57
+ G V ++TG +SG+G A L D S+ ++ G V V
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDD---FKRILLV 114
DV + E V V + SFG D+ VN AG N+ + + D+ F LLV
Sbjct: 65 DVATPEGVDAVVESVRSSFGGADILVNNAGTGS-------NETIMEAADEKWQFYWELLV 117
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLR----GVIINTASIAAYEGQSGQVAYSASKSGIV 170
RL+ L+ G+R G II+ ASI A + + Y+ +K+ ++
Sbjct: 118 -----MAAVRLARGLV-------PGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALM 165
Query: 171 GMTLPMARDLAGAGIRVNTIAPGLFDTP 198
+ +A ++ IRVN I PGL TP
Sbjct: 166 MFSKTLATEVIKDNIRVNCINPGLILTP 193
>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|B Chain B, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|C Chain C, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|D Chain D, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|B Chain B, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|C Chain C, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|D Chain D, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum
Length = 267
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 2 LKGVVGLVTG--GASGLGKATXXXXXXXXXXXXLCDLPTSEG-ESVAKEL----GPDVKF 54
LKG V +VTG G G+G + ++G E KEL G K
Sbjct: 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 55 APVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV 114
V S E +K V FG++D + AG + I + S++ + ++ V
Sbjct: 78 YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILD------GSVEAWNHVVQV 131
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQ--SGQVAYSASKSGIVGM 172
+ GTF+ A+ E G ++ TAS++ + Q +Y+ +K+G + M
Sbjct: 132 DLNGTFHCAKAVGHHFKERGT------GSLVITASMSGHIANFPQEQTSYNVAKAGCIHM 185
Query: 173 TLPMA---RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP 216
+A RD A RVN+I+PG DT L + ++ + IP
Sbjct: 186 ARSLANEWRDFA----RVNSISPGYIDTGLSDFVPKETQQLWHSMIP 228
>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
Length = 286
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 31/253 (12%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDL---------PTSEGESVA------K 46
+ G V ++G A G G++ D+ P S E +A K
Sbjct: 13 VAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLVK 72
Query: 47 ELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD 106
+L + A VDV E ++ AV + G+LD+ V AG+ + + + V
Sbjct: 73 DLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNV---- 128
Query: 107 DFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASK 166
++ ++ +N G ++ + A + H + G G I+ T+S+ + Y A+K
Sbjct: 129 -WQDMIDINLTGVWHTVK--AGVPH---VLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAK 182
Query: 167 SGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDE 226
G++G+ A +L IRVN + P T ++ +N++ + P PD+
Sbjct: 183 HGVIGLMRAFAVELGPHMIRVNAVLPTQVSTTMV--MNDQTFRLFRPDLENPG----PDD 236
Query: 227 FAQLVQSIITNPL 239
FA + Q + T P+
Sbjct: 237 FAPISQMMHTLPV 249
>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|B Chain B, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|C Chain C, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|D Chain D, Crystal Structure Of A Mammalian Reductase
Length = 260
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVG 118
V ED ++ V + + G +D+ V+ A ++ F N T D +IL VN
Sbjct: 72 VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFG--NIIDATEEVWD---KILHVNVKA 126
Query: 119 TFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMAR 178
T ++ ++ E + + G V+I +S+ AY Y+ SK+ ++G+T +A
Sbjct: 127 TV---LMTKAVVPE--MEKRGGGSVLI-VSSVGAYHPFPNLGPYNVSKTALLGLTKNLAV 180
Query: 179 DLAGAGIRVNTIAPGLFDTPLLSMLN-EKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
+LA IRVN +APGL T +L +K R + +RLG+P++ A +V + +
Sbjct: 181 ELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 240
Query: 238 --PLINGEVIRIDG 249
I GE + + G
Sbjct: 241 DASYITGETVVVGG 254
>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI1|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI2|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|H Chain H, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|D Chain D, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|F Chain F, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
Length = 263
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 24/205 (11%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLC----DLPTSEGESVAKELGPDVKFAPV 57
+ G V ++TG +SG+G A L D S+ ++ G V V
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
DV + E V V + SFG D+ VN AG N+ + + D+ + +
Sbjct: 65 DVATPEGVDAVVESVRSSFGGADILVNNAGTGS-------NETIMEAADE--KWQFYWEL 115
Query: 118 GTFNVARLSAQLIHENKLNEDGLR----GVIINTASIAAYEGQSGQVAYSASKSGIVGMT 173
RL+ L+ G+R G II+ ASI A + + Y+ +K+ ++ +
Sbjct: 116 HVMAAVRLARGLV-------PGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFS 168
Query: 174 LPMARDLAGAGIRVNTIAPGLFDTP 198
+A ++ IRVN I PGL TP
Sbjct: 169 KTLATEVIKDNIRVNCINPGLILTP 193
>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|B Chain B, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|C Chain C, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|D Chain D, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
Length = 260
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 20/211 (9%)
Query: 42 ESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGT 101
S+ PD+ D++ E + V + FG++D VN AG+ A +
Sbjct: 60 RSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEXTQ-- 117
Query: 102 VHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA 161
+D+ L VN G F++ + +A L + V I T+ +
Sbjct: 118 ----EDYDHNLGVNVAGFFHITQRAAA----EXLKQGSGHIVSITTSLVDQPXVGXPSAL 169
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
S +K G+ +T +A + + +G+RVN ++PG+ TP + + LA P +
Sbjct: 170 ASLTKGGLNAVTRSLAXEFSRSGVRVNAVSPGVIKTPXHPA---ETHSTLAGLHP----V 222
Query: 222 GHPDEFAQLVQSII---TNPLINGEVIRIDG 249
G E +V +++ I GE++ +DG
Sbjct: 223 GRXGEIRDVVDAVLYLEHAGFITGEILHVDG 253
>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMC|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMC|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMN|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMN|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMN|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMO|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMO|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMO|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMQ|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3BMQ|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3JQ6|A Chain A, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|B Chain B, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|C Chain C, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|D Chain D, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ8|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ9|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQ9|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQA|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQB|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQB|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQB|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQC|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQE|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQF|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQF|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQF|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQG|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3JQG|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3GN2|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3MCV|A Chain A, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|B Chain B, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|C Chain C, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|D Chain D, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|2X9G|A Chain A, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|B Chain B, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|C Chain C, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|D Chain D, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9V|A Chain A, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|B Chain B, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|C Chain C, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|D Chain D, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9N|A Chain A, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|B Chain B, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|C Chain C, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|D Chain D, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2YHI|B Chain B, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
pdb|2YHI|D Chain D, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
Length = 288
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
Y+ K +VG+T A +LA GIRVN +APG+ P+ + E+ ++ R +P +R
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 251
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
++ A V +++ I G +I++DG L ++
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286
>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD8|A Chain A, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|B Chain B, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|C Chain C, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|D Chain D, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2VZ0|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|C Chain C, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|D Chain D, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
Length = 268
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
Y+ K +VG+T A +LA GIRVN +APG+ P+ + E+ ++ R +P +R
Sbjct: 174 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 231
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
++ A V +++ I G +I++DG L ++
Sbjct: 232 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 266
>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQA|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQA|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQF|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQG|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3JQG|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|2YHI|A Chain A, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
pdb|2YHI|C Chain C, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
Length = 288
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
Y+ K +VG+T A +LA GIRVN +APG+ P+ + E+ ++ R +P +R
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 251
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
++ A V +++ I G +I++DG L ++
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286
>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMN|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMO|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMQ|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3BMQ|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3JQ8|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ8|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ8|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ9|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQ9|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQB|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQD|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3GN1|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|2YHU|A Chain A, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|B Chain B, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|C Chain C, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|D Chain D, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
Length = 288
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
Y+ K +VG+T A +LA GIRVN +APG+ P+ + E+ ++ R +P +R
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 251
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
++ A V +++ I G +I++DG L ++
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286
>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD7|C Chain C, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD7|D Chain D, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
Length = 268
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
Y+ K +VG+T A +LA GIRVN +APG+ P+ + E+ ++ R +P +R
Sbjct: 174 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 231
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
++ A V +++ I G +I++DG L ++
Sbjct: 232 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 266
>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQ7|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQ7|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQA|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
Length = 288
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
Y+ K +VG+T A +LA GIRVN +APG+ P+ + E+ ++ R +P +R
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 251
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
++ A V +++ I G +I++DG L ++
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286
>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|B Chain B, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|C Chain C, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|D Chain D, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
Length = 268
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 162 YSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRL 221
Y+ K +VG+T A +LA GIRVN +APG+ P+ + E+ ++ R +P +R
Sbjct: 174 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVPLGRRE 231
Query: 222 GHPDEFAQLVQSIITNP--LINGEVIRIDGALRMI 254
++ A V +++ I G +I++DG L ++
Sbjct: 232 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 266
>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
pdb|3IOY|B Chain B, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
Length = 319
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL--------GPDVK 53
G VTGGA+G+G + D+ +S+ K L GP+V
Sbjct: 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQ---DSIDKALATLEAEGSGPEVM 62
Query: 54 FAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILL 113
+DV S E + A + FG + + N AG++ + S DD+ +L
Sbjct: 63 GVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNL------FQPIEESSYDDWDWLLG 116
Query: 114 VNTVGTFN-VARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGM 172
VN G N V +++ K E G ++NTAS+AA+ Y+ +K + G+
Sbjct: 117 VNLHGVVNGVTTFVPRMVERVKAGEQK-GGHVVNTASMAAFLAAGSPGIYNTTKFAVRGL 175
Query: 173 TLPMARDLAGAGIRVNTIAPGL 194
+ + L I V+ + PGL
Sbjct: 176 SESLHYSLLKYEIGVSVLCPGL 197
>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|B Chain B, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|C Chain C, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|D Chain D, Improved Nadph-Dependent Blue Fluorescent Protein
Length = 266
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 50 PDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFK 109
P+ A VDVT + A+ + +G D VN AG+ +I ++++
Sbjct: 59 PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQI------DTQEANEWQ 112
Query: 110 RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGI 169
R+ VN +G N + A L N G IIN +SIA + AY +K +
Sbjct: 113 RMFDVNVLGLLN--GMQAVLAPMKARN----CGTIINISSIAGKKTFPDHAAYCGTKFAV 166
Query: 170 VGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
++ + ++A + +RV TIAP T LLS
Sbjct: 167 HAISENVREEVAASNVRVMTIAPSAVKTELLS 198
>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
SDR FROM Xanthobacter Autotrophicus Py2
Length = 272
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 77/192 (40%), Gaps = 16/192 (8%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDV 65
+ +VTG SG+G+A L + A E+G D P DVT + V
Sbjct: 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSV 89
Query: 66 QKAVLLCKDSFGKLDVNVNCAGISC-AFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR 124
+ + FG++DV N AG A + + +K+++ N G F
Sbjct: 90 RALFTATVEKFGRVDVLFNNAGTGAPAIPXEDL------TFAQWKQVVDTNLTGPF---- 139
Query: 125 LSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAG 184
L Q ++ G IIN SI+A + Y+A+K I G+T + D
Sbjct: 140 LCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDG---- 195
Query: 185 IRVNTIAPGLFD 196
RV+ IA G D
Sbjct: 196 -RVHDIACGQID 206
>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|B Chain B, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|C Chain C, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|D Chain D, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
Length = 262
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVD 58
L G V +VTG + G+G A L + +V +E+ G + + D
Sbjct: 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLD--DFKRILLVNT 116
++ + + + G+ DV VN AG+ + G +H++ ++ ++ VN
Sbjct: 87 LSHSDAIAAFATGVLAAHGRCDVLVNNAGV-------GWFGGPLHTMKPAEWDALIAVNL 139
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
+ + R A + K RG IIN +S+A + AY+ASK G+ G+
Sbjct: 140 KAPYLLLRAFAPAMIAAK------RGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSA 193
Query: 177 ARDLAGAGIRVNTIAPGLFDT 197
A +L +RV+ +APG T
Sbjct: 194 AEELRQHQVRVSLVAPGSVRT 214
>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
Length = 259
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 46 KELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSL 105
++LG D+T+ +V+ A+ D FG++ V+ AG A K T+ +
Sbjct: 54 EKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARK-------TIAEM 106
Query: 106 DD--FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQS-GQVAY 162
D+ + ++L VN F L + L + G I+ +S A +G G +AY
Sbjct: 107 DEAFWHQVLDVNLTSLF--------LTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAY 158
Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNE-KVRNFLARSIPAPQRL 221
+ SK ++ T +A+++ G IRVN + PG+ T + +VR +A + + +R
Sbjct: 159 ATSKGAVMTFTRGLAKEV-GPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGA-TSLKRE 216
Query: 222 GHPDEFAQLVQSIITN--PLINGEVIRIDGAL 251
G ++ A LV + ++ + G I+G +
Sbjct: 217 GSSEDVAGLVAFLASDDAAYVTGACYDINGGV 248
>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASU|B Chain B, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASV|A Chain A, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|B Chain B, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|C Chain C, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|D Chain D, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|E Chain E, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|F Chain F, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
Length = 248
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 13/188 (6%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
LVTG +G G+ + + ELG ++ A +DV + +++
Sbjct: 4 LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEE 63
Query: 68 AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVAR-LS 126
+ + +D+ VN AG++ + S++D++ ++ N G + R +
Sbjct: 64 MLASLPAEWCNIDILVNNAGLALGME-----PAHKASVEDWETMIDTNNKGLVYMTRAVL 118
Query: 127 AQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIR 186
++ N G IIN S A +G Y A+K+ + +L + DL G +R
Sbjct: 119 PGMVERN-------HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVR 171
Query: 187 VNTIAPGL 194
V I PGL
Sbjct: 172 VTDIEPGL 179
>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|B Chain B, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|C Chain C, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|D Chain D, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|E Chain E, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|F Chain F, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|G Chain G, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|H Chain H, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
Length = 279
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 34/229 (14%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLC--DLPTSE-GESVAKELGPDVKFAPVD 58
LKG V VTG + G+G A + P E E + K G K +
Sbjct: 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 59 VTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKG---TVHSLDDFKRILLVN 115
++ + V++ + + FG +DV V AG++ + +G V + D + +I+ V+
Sbjct: 92 ISDPKSVEETISQQEKDFGTIDVFVANAGVT-------WTQGPEIDVDNYDSWNKIISVD 144
Query: 116 TVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG--------QVAYSASKS 167
G + + ++ +N +G +I T+SI SG Q Y+ +K+
Sbjct: 145 LNGVYYCSHNIGKIFKKNG------KGSLIITSSI------SGKIVNIPQLQAPYNTAKA 192
Query: 168 GIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP 216
+ +A + A RVNTI+PG DT + ++ ++ + P
Sbjct: 193 ACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTP 240
>pdb|3RJ5|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ5|B Chain B, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|B Chain B, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|C Chain C, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|D Chain D, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|E Chain E, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|F Chain F, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
Length = 254
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 37 PTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL---DVNVNCAGISCAFK 93
PT+ E A ++ F DVT V ++ L K F +L D+ +N AGI
Sbjct: 42 PTALAELKAINPKVNITFHTYDVTVP--VAESKKLLKKIFDQLKTVDILINGAGI----- 94
Query: 94 IFNYNKGTVHSLDDFK--RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA 151
LDD + R + +N G NV + K G G+I N S+
Sbjct: 95 -----------LDDHQIERTIAINFTGLVNVTTAILDFWDKRK---GGPGGIIANICSVT 140
Query: 152 AYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFL 211
+ YSASK+ +V T +A+ G+ +I PG+ TPL+ N +
Sbjct: 141 GFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLD--- 197
Query: 212 ARSIPAPQRLGHPDEFAQ-----LVQSIITNPLINGEVIRID-GALRMI 254
A L HP + ++ V++I N NG + ++D G L I
Sbjct: 198 VEPRVAELLLSHPTQTSEQCGQNFVKAIEANK--NGAIWKLDLGTLEAI 244
>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid
Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With
Nadh
pdb|2DKN|B Chain B, Crystal Structure Of The 3-alpha-hydroxysteroid
Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With
Nadh
Length = 255
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 150 IAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSM------L 203
+A +GQ+ +AY+ SK + + D AG G+R+N +APG +TPLL
Sbjct: 142 LAEQQGQT-HLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY 200
Query: 204 NEKVRNFLARSIPAP-QRLGHPDEFAQLVQSII--TNPLINGEVIRIDGAL 251
E R F+ AP R P E A+ + ++ I+G V+ +DG +
Sbjct: 201 GESTRRFV-----APLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGM 246
>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
Length = 262
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 96/254 (37%), Gaps = 18/254 (7%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL----GPDVKFAPV 57
L+G +VTGG G+G+ + T++ ++ +L V
Sbjct: 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
DV+ + FG +DV AG+ F + + I VN
Sbjct: 68 DVSDRAQCDALAGRAVEEFGGIDVVCANAGV------FPDAPLATMTPEQLNGIFAVNVN 121
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
GTF + + L G V++ ++ G G Y A+K+ +G A
Sbjct: 122 GTFYAVQACL-----DALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAA 176
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN 237
+LA I VN I PG T L E+ +ARSIPA LG P++ L + T
Sbjct: 177 IELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPA-GALGTPEDIGHLAAFLATK 235
Query: 238 P--LINGEVIRIDG 249
I G+ I +DG
Sbjct: 236 EAGYITGQAIAVDG 249
>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|B Chain B, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|C Chain C, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|D Chain D, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
Length = 266
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 24/184 (13%)
Query: 76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKL 135
G+LD+ VN AG+ +I T + D+ L VN F + R + L
Sbjct: 92 LGRLDIVVNNAGVISRGRI------TETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGG 145
Query: 136 NEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLF 195
I+N AS G Y +K+ + +T D A GIR+N + P
Sbjct: 146 GA------IVNVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEV 199
Query: 196 DTPLLSMLNEKVRNF--------LARSIPAPQRLGHPDEFAQLVQSIITNP--LINGEVI 245
+TP L K R F L R++P R+ P++ A +V + ++ + G ++
Sbjct: 200 NTPXLRTGFAK-RGFDPDRAVAELGRTVPL-GRIAEPEDIADVVLFLASDAARYLCGSLV 257
Query: 246 RIDG 249
++G
Sbjct: 258 EVNG 261
>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
pdb|1XHL|B Chain B, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
Length = 297
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 76 FGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKL 135
FGK+D+ VN AG + A N T ++ +++ +N + + + + + + K
Sbjct: 104 FGKIDILVNNAGANLADGTAN----TDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK- 158
Query: 136 NEDGLRGVIINTASI-AAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGL 194
G I+N +SI A + SG Y+ +K+ + T A DL G+RVN+++PG
Sbjct: 159 ------GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGA 212
Query: 195 FDTPLLSML------NEKVRNFLA---RSIPAPQRLGHPDEFAQLV 231
T + + ++K+ +F+ IP G P+E A ++
Sbjct: 213 VATGFMGAMGLPETASDKLYSFIGSRKECIPVGH-CGKPEEIANII 257
>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|B Chain B, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|C Chain C, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|D Chain D, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|E Chain E, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|F Chain F, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|G Chain G, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|H Chain H, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|I Chain I, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|J Chain J, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
Length = 281
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEE-- 63
V LVTG +SG G+A T + + + +DVT E
Sbjct: 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERI 66
Query: 64 DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVA 123
DV A +L + +G++DV VN AG + ++ + + T L D + + F A
Sbjct: 67 DVVAADVLAR--YGRVDVLVNNAGRT---QVGAFEETTERELRDLFELHV------FGPA 115
Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGA 183
RL+ L+ + + E G G ++N +S +G AYSA+K+ + ++ +A ++A
Sbjct: 116 RLTRALLPQXR--ERG-SGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPF 172
Query: 184 GIRVNTIAPGLFDTPLL 200
GI+V + PG F T L
Sbjct: 173 GIKVLIVEPGAFRTNLF 189
>pdb|1A4U|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
pdb|1A4U|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
pdb|1B16|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-3-pentanone
pdb|1B16|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-3-pentanone
pdb|1B14|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Binary
Complex With Nad+
pdb|1B14|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis Binary
Complex With Nad+
pdb|1B15|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-Acetone
pdb|1B15|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-Acetone
pdb|1B2L|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis:
Ternary Complex With Nad-Cyclohexanone
pdb|1SBY|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
Complexed With Nad+ And 2,2,2-Trifluoroethanol At 1.1 A
Resolution
pdb|1SBY|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
Complexed With Nad+ And 2,2,2-Trifluoroethanol At 1.1 A
Resolution
Length = 254
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 37 PTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKL---DVNVNCAGISCAFK 93
PT+ E A ++ F DVT V ++ L K F +L D+ +N AGI
Sbjct: 42 PTALAELKAINPKVNITFHTYDVTVP--VAESKKLLKKIFDQLKTVDILINGAGI----- 94
Query: 94 IFNYNKGTVHSLDDFK--RILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA 151
LDD + R + +N G N + K G G+I N S+
Sbjct: 95 -----------LDDHQIERTIAINFTGLVNTTTAILDFWDKRK---GGPGGIIANICSVT 140
Query: 152 AYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFL 211
+ YSASK+ +V T +A+ G+ +I PG+ TPL+ N +
Sbjct: 141 GFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLD--- 197
Query: 212 ARSIPAPQRLGHPDEFAQ-----LVQSIITNPLINGEVIRID-GALRMI 254
A L HP + ++ V++I N NG + ++D G L I
Sbjct: 198 VEPRVAELLLSHPTQTSEQCGQNFVKAIEANK--NGAIWKLDLGTLEAI 244
>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
pdb|1P33|B Chain B, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
pdb|1P33|C Chain C, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
pdb|1P33|D Chain D, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
Length = 289
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 22/193 (11%)
Query: 72 CKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV--------NTVGTFNVA 123
C +G+ DV VN A + + G S K L V N + + +
Sbjct: 97 CYMHWGRCDVLVNNASSFYPTPLLRKDAGEGGSSVGDKESLEVAAADLFGSNAIAPYFLI 156
Query: 124 RLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGA 183
+ AQ + + + + G I+N + G Y+ +K + G+T A +LA
Sbjct: 157 KAFAQRVADTRAEQRGTSYSIVNMVDAMTSQPLLGYTMYTMAKEALEGLTRSAALELASL 216
Query: 184 GIRVNTIAPGLF----DTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP- 238
IRVN ++PGL D P + E R R +P QR +E + +V + +P
Sbjct: 217 QIRVNGVSPGLSVLPDDMPF--SVQEDYR----RKVPLYQRNSSAEEVSDVVI-FLCSPK 269
Query: 239 --LINGEVIRIDG 249
I G I++DG
Sbjct: 270 AKYITGTCIKVDG 282
>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|B Chain B, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|C Chain C, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|D Chain D, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
Length = 283
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 109/266 (40%), Gaps = 40/266 (15%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTSE 62
V L+TG SG+G+AT +E E VA E+ G DV+ E
Sbjct: 30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89
Query: 63 EDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFK-----RILLVNTV 117
+ AV FG LD+ V AGI+ G +DD K + VN
Sbjct: 90 LQXRNAVRDLVLKFGHLDIVVANAGIN----------GVWAPIDDLKPFEWDETIAVNLR 139
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEG--QSGQVAYSASKSGIVGMTLP 175
GTF L+ + + G I+ +SI G AY+A+K+ V +
Sbjct: 140 GTFLTLHLTVPYLKQRG------GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQ 193
Query: 176 MARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP-------APQRLGHP---D 225
+A +L IRVN + PG +T + N K+R+ +IP P G P +
Sbjct: 194 LALELGKHHIRVNAVCPGAIETNISD--NTKLRHEEETAIPVEWPKGQVPITDGQPGRSE 251
Query: 226 EFAQLVQSIITNPL--INGEVIRIDG 249
+ A+L++ +++ + G + IDG
Sbjct: 252 DVAELIRFLVSERARHVTGSPVWIDG 277
>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
pdb|1YB1|B Chain B, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
Length = 272
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 88/233 (37%), Gaps = 27/233 (11%)
Query: 4 GVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA---KELGPDVKFAPVDVT 60
G + L+TG G+G+ T L D+ E A K LG V VD +
Sbjct: 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCS 90
Query: 61 SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
+ ED+ + K G + + VN AG+ +F + ++ VN + F
Sbjct: 91 NREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQI------EKTFEVNVLAHF 144
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
+ + +N G I+ AS A + +AY +SK VG + +L
Sbjct: 145 WTTKAFLPAMTKNN------HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDEL 198
Query: 181 AG---AGIRVNTIAPGLFDTPLL---------SMLNEKVRNFLARSIPAPQRL 221
A G++ + P +T + ++ E+V N L I Q++
Sbjct: 199 AALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQKM 251
>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|B Chain B, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|C Chain C, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|D Chain D, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
Length = 272
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 12/192 (6%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPV--DVTSEEDV 65
+TG SG G+A L +++A EL + P+ DV
Sbjct: 25 FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAX 84
Query: 66 QKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARL 125
AV + F L +N AG++ + LDD+ + N G RL
Sbjct: 85 SAAVDNLPEEFATLRGLINNAGLA-----LGTDPAQSCDLDDWDTXVDTNIKGLLYSTRL 139
Query: 126 SAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGI 185
+L G I+N S+A G Y +K+ + +L + DL G G+
Sbjct: 140 LLP-----RLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGV 194
Query: 186 RVNTIAPGLFDT 197
RV + PGL ++
Sbjct: 195 RVTNLEPGLCES 206
>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|B Chain B, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|C Chain C, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|D Chain D, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
Length = 287
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 78/200 (39%), Gaps = 19/200 (9%)
Query: 8 LVTGGASGLGKATXXXXXXXX---XXXXLCDLPTSEGESVAKELGPD-----VKFAPVDV 59
L+TG ++G+GKAT L + E + K + + V A +D+
Sbjct: 37 LITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDI 96
Query: 60 TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
T E ++ + F +D+ VN AG K ++ + +D + + N
Sbjct: 97 TQAEKIKPFIENLPQEFKDIDILVNNAG-----KALGSDRVGQIATEDIQDVFDTNVTAL 151
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARD 179
N+ + + G I+N SIA + Y ASK + T + ++
Sbjct: 152 INITQAVLPIFQAKN------SGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKE 205
Query: 180 LAGAGIRVNTIAPGLFDTPL 199
L IRV IAPGL +T
Sbjct: 206 LINTKIRVILIAPGLVETEF 225
>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
pdb|3ICC|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
Length = 255
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 19/176 (10%)
Query: 78 KLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNE 137
K D+ +N AGI I + T F R + VN F + + + + +N
Sbjct: 91 KFDILINNAGIGPGAFI----EETTEQF--FDRXVSVNAKAPFFIIQQALSRLRDNSR-- 142
Query: 138 DGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDT 197
IIN +S A +AYS +K I T +A+ L GI VN I PG T
Sbjct: 143 ------IINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLGARGITVNAILPGFVKT 196
Query: 198 PL-LSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP---LINGEVIRIDG 249
+L++ A +I A RLG ++ A + + +P + G++I + G
Sbjct: 197 DXNAELLSDPXXKQYATTISAFNRLGEVEDIAD-TAAFLASPDSRWVTGQLIDVSG 251
>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 264
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 42 ESVAKEL---GPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYN 98
E VAK++ G D+T + V V ++G++DV +N A F++ +
Sbjct: 49 EDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNA-----FRVPSMK 103
Query: 99 KGTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSG 158
+ + + + + G + + + E+K G ++N S+ Q+
Sbjct: 104 PFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-------GAVVNVNSMVVRHSQAK 156
Query: 159 QVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
AY +KS ++ M+ +A +L GIRVN++ PG
Sbjct: 157 YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPG 191
>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional
Enzyme Type 2 From Drosophila Melanogaster
Length = 613
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 21/198 (10%)
Query: 4 GVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKF--------- 54
G V +VTG +GLG+ + DL + A + D+
Sbjct: 19 GRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE 78
Query: 55 APVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV 114
A D S D K + +FG++D+ VN AGI + ++ + ++D V
Sbjct: 79 AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVND------V 132
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
+ G+F + A + K N G II T+S + G GQV Y+A+K G++G+
Sbjct: 133 HLKGSFKCTQ--AAFPYMKKQN----YGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLAN 186
Query: 175 PMARDLAGAGIRVNTIAP 192
+A + A + N I P
Sbjct: 187 TVAIEGARNNVLCNVIVP 204
>pdb|1MG5|A Chain A, Crystal Structure Of Drosophila Melanogaster Alcohol
Dehydrogenase Complexed With Nadh And Acetate At 1.6 A
pdb|1MG5|B Chain B, Crystal Structure Of Drosophila Melanogaster Alcohol
Dehydrogenase Complexed With Nadh And Acetate At 1.6 A
Length = 255
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 52 VKFAPVDVTSEEDVQKAVLLCKDSFGKL---DVNVNCAGISCAFKIFNYNKGTVHSLDD- 107
V F P DVT + + L K F +L DV +N AGI LDD
Sbjct: 58 VTFYPYDVTVP--IAETTKLLKTIFAQLKTVDVLINGAGI----------------LDDH 99
Query: 108 -FKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASK 166
+R + VN G N +A L +K + G G+I N S+ + YS +K
Sbjct: 100 QIERTIAVNYTGLVNTT--TAILDFWDK-RKGGPGGIICNIGSVTGFNAIYQVPVYSGTK 156
Query: 167 SGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDE 226
+ +V T +A+ G+ T+ PG+ T L+ N + A + L HP +
Sbjct: 157 AAVVNFTSSLAKLAPITGVTAYTVNPGITRTTLVHKFNSWLD---VEPQVAEKLLAHPTQ 213
Query: 227 FA-----QLVQSIITNPLINGEVIRID-GALRMI 254
+ V++I N NG + ++D G L I
Sbjct: 214 PSLACAENFVKAIELNQ--NGAIWKLDLGTLEAI 245
>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|D Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
Length = 279
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 20/242 (8%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAP--VDVT 60
+ LVTG + G+G A C E +A E G P D++
Sbjct: 34 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 93
Query: 61 SEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTF 120
+EED+ + +D+ +N AG++ + + S +K + VN +
Sbjct: 94 NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLS------GSTSGWKDMFNVNVLALS 147
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA--YSASKSGIVGMTLPMAR 178
R + Q + E +++ G IIN S++ + V YSA+K + +T + +
Sbjct: 148 ICTREAYQSMKERNVDD----GHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 203
Query: 179 DL--AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIIT 236
+L A IR I+PG+ +T L++K A + + L P++ A+ V +++
Sbjct: 204 ELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCL-KPEDVAEAVIYVLS 262
Query: 237 NP 238
P
Sbjct: 263 TP 264
>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
Length = 245
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
G +I S A G Y+ASK + G+ ++ A GIRV+T++PG +TP+L
Sbjct: 126 GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ 185
Query: 202 -MLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSII 235
+++ + NF P+ P E A ++ +I
Sbjct: 186 GLMDSQGTNF------RPEIYIEPKEIANAIRFVI 214
>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Reductase In Complex With Nadph And Pyroquilon
Length = 274
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 106/268 (39%), Gaps = 35/268 (13%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEG--ESVA--KELGPDVKFAPV 57
L G V L TG G+G+ + +S+ E VA K+LG
Sbjct: 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 78
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
D++ +V FG LD ++ +G+ + + F ++ +NT
Sbjct: 79 DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQ------ELFDKVFNLNTR 132
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAA-YEGQSGQVAYSASKSGIVGMTLPM 176
G F VA+ + G II T+SIAA G Y+ SK+ + G
Sbjct: 133 GQFFVAQQGLKHCRRG--------GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAF 184
Query: 177 ARDLAGAGIRVNTIAPGLFDTPLLS-------------MLNEKVRNFLARSIPAPQRLGH 223
A D G+ VN IAPG T + M EK+ LA P +R+G+
Sbjct: 185 AVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGY 243
Query: 224 PDEFAQLVQSIIT--NPLINGEVIRIDG 249
P + + V ++ + ING+VI++ G
Sbjct: 244 PADIGRAVSALCQEESEWINGQVIKLTG 271
>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2
From Pseudomonas Aeruginosa Pao1 Containing An Atypical
Catalytic Center
pdb|3LF1|B Chain B, Apo Structure Of The Short Chain Oxidoreductase Q9hya2
From Pseudomonas Aeruginosa Pao1 Containing An Atypical
Catalytic Center
pdb|3LF2|A Chain A, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|B Chain B, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|C Chain C, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|D Chain D, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
Length = 265
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 17/201 (8%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSE---GESVAKELGPDVK-FAPV 57
L V +VTGG+SG+G AT C ES ++ P + FA V
Sbjct: 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65
Query: 58 -DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
DV V+ C+ + G + VN AG ++ + + T + + ++ +
Sbjct: 66 CDVLDALQVRAFAEACERTLGCASILVNNAGQG---RVSTFAETTDEAWSEELQLKFFSV 122
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
+ V QL E I+ S+ A + + VA SA+++G+ + M
Sbjct: 123 I--HPVRAFLPQL-------ESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSM 173
Query: 177 ARDLAGAGIRVNTIAPGLFDT 197
A + A G+RVN I GL ++
Sbjct: 174 AFEFAPKGVRVNGILIGLVES 194
>pdb|3L6E|A Chain A, Crystal Structure Of Putative Short Chain
DehydrogenaseREDUCTASE Family Oxidoreductase From
Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966
pdb|3L6E|B Chain B, Crystal Structure Of Putative Short Chain
DehydrogenaseREDUCTASE Family Oxidoreductase From
Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966
Length = 235
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 13/185 (7%)
Query: 8 LVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTSEEDVQK 67
+VTG SGLG+A + LG V D+ EDV
Sbjct: 7 IVTGAGSGLGRALTIGLVERGHQVSXXGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDV 66
Query: 68 AVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGTFNVARLSA 127
A + G ++ ++CAG + V++ + +R+ N V T VA+ +
Sbjct: 67 AFAAAVEWGGLPELVLHCAGTG------EFGPVGVYTAEQIRRVXESNLVSTILVAQQTV 120
Query: 128 QLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRV 187
+LI E GV+ N S AA G++ + Y ASK G G + +L + +R+
Sbjct: 121 RLIGERG-------GVLANVLSSAAQVGKANESLYCASKWGXRGFLESLRAELKDSPLRL 173
Query: 188 NTIAP 192
+ P
Sbjct: 174 VNLYP 178
>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|B Chain B, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|C Chain C, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|D Chain D, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
Length = 244
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 14/183 (7%)
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
D++ DV++ + +G +D VN AG+ + + + +DF + N
Sbjct: 66 DISDMADVRRLTTHIVERYGHIDCLVNNAGVG------RFGALSDLTEEDFDYTMNTNLK 119
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
GTF + + L+ G I S+AA + Y SK G G+ M
Sbjct: 120 GTFFLTQALFALMERQH------SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMR 173
Query: 178 RDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLA--RSIPAPQRLGHPDEFAQLVQSII 235
+R+ + PG TP+ ++++++ + I AP + +V+ II
Sbjct: 174 LYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEII 233
Query: 236 TNP 238
P
Sbjct: 234 LRP 236
>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1
pdb|2Z1N|B Chain B, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1
Length = 260
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 32/266 (12%)
Query: 2 LKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAPVDVTS 61
++G + +VT G+SGLG A+ L + E+ A + V A VD+ +
Sbjct: 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 62 EE-----DVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
+ D+ + +D G D+ V G + V D+ R+L +
Sbjct: 65 GDIREPGDIDRLFEKARD-LGGADILVYSTGGPRPGRFMELG---VEDWDESYRLLARSA 120
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
V V R +A+ ++ E G G ++ S+ + + ++G+ +
Sbjct: 121 VW---VGRRAAE-----QMVEKGW-GRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTL 171
Query: 177 ARDLAGAGIRVNTIAPGLFDTP-LLSMLNEKVR----------NFLARSIPAPQRLGHPD 225
A +LA G+ VN + P L T + S+ E+ R +A IP R+G P+
Sbjct: 172 ALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPM-GRVGKPE 230
Query: 226 EFAQLVQSIITN--PLINGEVIRIDG 249
E A +V + + I G VI +DG
Sbjct: 231 ELASVVAFLASEKASFITGAVIPVDG 256
>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|B Chain B, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|C Chain C, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|D Chain D, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
Length = 249
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 135 LNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGL 194
+ E G G I+ S + ++++ + G ++ ++A GI VN +APG
Sbjct: 127 MKEKGW-GRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGW 185
Query: 195 FDTPLL-SMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGAL 251
+T + +L+E+ + + IP +R+ P+E A +V + + + G+ I +DG L
Sbjct: 186 TETERVKELLSEEKKKQVESQIPM-RRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL 244
>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From
Leishmania Donovani
pdb|2XOX|B Chain B, Crystal Structure Of Pteridine Reductase (Ptr1) From
Leishmania Donovani
Length = 288
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 12/191 (6%)
Query: 69 VLLCKDSFGKLDVNVNCAGISCAFKIFNYNK-GTVHSLDDFKRILLV-------NTVGTF 120
V C +G+ DV VN A + ++ G V + D + + N + +
Sbjct: 93 VAACYTHWGRCDVLVNNASSFYPTPLLRKDEDGHVPCVGDREAMEAAAADLFGSNAMAPY 152
Query: 121 NVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDL 180
+ + A + + + G I+N + G Y+ +K + G+T A +L
Sbjct: 153 FLIKAFAHRVADTPAEQRGTNYSIVNMVDAMTSQPLLGYTIYTMAKGALEGLTRSAALEL 212
Query: 181 AGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSIITN--P 238
A IRVN + PGL + L + VR +P QR E + +V + ++
Sbjct: 213 APLQIRVNGVGPGL--SVLADDMPPAVREDYRSKVPLYQRDSSAAEVSDVVIFLCSSKAK 270
Query: 239 LINGEVIRIDG 249
+ G +++DG
Sbjct: 271 YVTGTCVKVDG 281
>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
pdb|4IMR|B Chain B, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
Length = 275
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
G +++ SI +S AY+A+K+ + ARD AG + +NT+APGL DT +
Sbjct: 161 GRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNA 220
Query: 202 --------MLNEKVR--NFLARSIPAPQRLGHPDEF--AQLVQSIITNPLINGEVIRIDG 249
+E VR N++ R+ G P+E A L + + GE I + G
Sbjct: 221 DRRAQDPEGWDEYVRTLNWMGRA-------GRPEEMVGAALFLASEACSFMTGETIFLTG 273
>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXH|B Chain B, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXH|C Chain C, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXH|D Chain D, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
Length = 276
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA 217
G Y+ +K + G+T A +LA IRVN +APGL P + ++ + R +P
Sbjct: 178 GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQETQEEYRRKVPL 235
Query: 218 PQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGAL 251
Q + A + +++ I G +++DG L
Sbjct: 236 GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271
>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXF|B Chain B, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXF|C Chain C, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXF|D Chain D, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
Length = 276
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 158 GQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPA 217
G Y+ +K + G+T A +LA IRVN +APGL P ++ + R +P
Sbjct: 178 GFCVYTXAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAXPQETQEEYRRKVPL 235
Query: 218 PQRLGHPDEFAQLVQSIITNP--LINGEVIRIDGAL 251
Q + A + +++ I G +++DG L
Sbjct: 236 GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271
>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex
pdb|1W6U|B Chain B, Structure Of Human Decr Ternary Complex
pdb|1W6U|D Chain D, Structure Of Human Decr Ternary Complex
pdb|1W6U|C Chain C, Structure Of Human Decr Ternary Complex
Length = 302
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 144 IINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTP-LLSM 202
++ +I A G V +++K+G+ M+ +A + G+R N I PG T S
Sbjct: 159 FLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSR 218
Query: 203 LNEK---VRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDG 249
L+ + + R IP RLG +E A L + ++ ING VI+ DG
Sbjct: 219 LDPTGTFEKEMIGR-IPC-GRLGTVEELANLAAFLCSDYASWINGAVIKFDG 268
>pdb|3TFO|A Chain A, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|B Chain B, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|C Chain C, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|D Chain D, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
Length = 264
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 25/244 (10%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL---GPDVKFAPV 57
M+ V L+TG + G+G+ L + E++A E+ G +
Sbjct: 1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL 60
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
DVT V D++G++DV VN AG + + +D+++R++ VN
Sbjct: 61 DVTDRHSVAAFAQAAVDTWGRIDVLVNNAG------VMPLSPLAAVKVDEWERMIDVNIK 114
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
G + A L + E G IIN SI A Y A+K + ++ +
Sbjct: 115 GVL--WGIGAVL----PIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLR 168
Query: 178 RDLAGAGIRVNTIAPGLFDTPLL-SMLNEKVRNFL--ARSIPAPQRLGHPDEFAQLVQSI 234
++ IRV + PG+ ++ L ++ +E+ + R+I P + A+ V+ +
Sbjct: 169 QE--STNIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIAL-----QPADIARAVRQV 221
Query: 235 ITNP 238
I P
Sbjct: 222 IEAP 225
>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|B Chain B, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|C Chain C, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|D Chain D, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|E Chain E, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|F Chain F, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|G Chain G, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|H Chain H, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2WYU|A Chain A, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Apo-Form
pdb|2WYU|B Chain B, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Apo-Form
pdb|2WYU|C Chain C, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Apo-Form
pdb|2WYU|D Chain D, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Apo-Form
pdb|2WYV|A Chain A, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad-Form
pdb|2WYV|B Chain B, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad-Form
pdb|2WYV|C Chain C, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad-Form
pdb|2WYV|D Chain D, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad-Form
pdb|2WYW|A Chain A, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad And Triclosan-Form
pdb|2WYW|B Chain B, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad And Triclosan-Form
pdb|2WYW|C Chain C, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad And Triclosan-Form
pdb|2WYW|D Chain D, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad And Triclosan-Form
Length = 261
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 38/230 (16%)
Query: 40 EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNK 99
E E +A+ LG + F DVT +E++ K++FG LD V+ I+ A + +
Sbjct: 49 EAEKLAEALGGALLF-RADVTQDEELDALFAGVKEAFGGLDYLVHA--IAFAPREAMEGR 105
Query: 100 GTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ 159
D+ L V+ VAR + L+ E G I+ A+ +
Sbjct: 106 YIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--------GGIVTLTYYASEKVVPKY 157
Query: 160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP--- 216
+ +K+ + +A +L G+RVN I+ G VR ARSIP
Sbjct: 158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAG------------PVRTVAARSIPGFT 205
Query: 217 ---------APQRLGHPDEFAQLVQSIITNPL---INGEVIRIDGALRMI 254
AP R E + + +PL I GEV+ +D ++
Sbjct: 206 KMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIM 255
>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|1ULU|B Chain B, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|1ULU|C Chain C, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|1ULU|D Chain D, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
Length = 261
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 88/224 (39%), Gaps = 38/224 (16%)
Query: 40 EGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNK 99
E E +A+ LG + F DVT +E++ K++FG LD V+ I+ A + +
Sbjct: 49 EAEKLAEALGGALLFR-ADVTQDEELDALFAGVKEAFGGLDYLVHA--IAFAPREAXEGR 105
Query: 100 GTVHSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQ 159
D+ L V+ VAR + L+ E G I+ A+ +
Sbjct: 106 YIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--------GGIVTLTYYASEKVVPKY 157
Query: 160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIP--- 216
+ +K+ + +A +L G+RVN I+ G VR ARSIP
Sbjct: 158 NVXAIAKAALEASVRYLAYELGPKGVRVNAISAG------------PVRTVAARSIPGFT 205
Query: 217 ---------APQRLGHPDEFAQLVQSIITNPL---INGEVIRID 248
AP R E + + +PL I GEV+ +D
Sbjct: 206 KXYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVD 249
>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|B Chain B, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|C Chain C, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|D Chain D, Crystal Structure Of A Probable Dehydrogenase Protein
Length = 273
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 144 IINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSML 203
++ T S A G Y+ASK+ + DL GIR+NT++PG +T L L
Sbjct: 155 VVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVEL 214
Query: 204 NEK-------VRNFLARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDG 249
K + N LA +P R+G +E A + ++ + G + +DG
Sbjct: 215 AGKDPVQQQGLLNALAAQVPXG-RVGRAEEVAAAALFLASDDSSFVTGAELFVDG 268
>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For
Alginate Metabolism
pdb|3AFM|B Chain B, Crystal Structure Of Aldose Reductase A1-R Responsible For
Alginate Metabolism
pdb|3AFN|B Chain B, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|A Chain A, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|C Chain C, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|D Chain D, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
Length = 258
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 184 GIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQ---LVQSIITNPLI 240
G+R N ++PG DT + + VR+ ++ IP R G +E A S + + I
Sbjct: 186 GVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPM-GRFGTAEEMAPAFLFFASHLASGYI 244
Query: 241 NGEVIRIDG 249
G+V+ I+G
Sbjct: 245 TGQVLDING 253
>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In
Complex With Nadph
pdb|3UCE|B Chain B, Crystal Structure Of A Small-Chain Dehydrogenase In
Complex With Nadph
pdb|3UCE|C Chain C, Crystal Structure Of A Small-Chain Dehydrogenase In
Complex With Nadph
pdb|3UCE|D Chain D, Crystal Structure Of A Small-Chain Dehydrogenase In
Complex With Nadph
pdb|3UCF|A Chain A, Crystal Structure Of A Small-chain Dehydrogenase
pdb|3UCF|B Chain B, Crystal Structure Of A Small-chain Dehydrogenase
pdb|3UCF|C Chain C, Crystal Structure Of A Small-chain Dehydrogenase
pdb|3UCF|D Chain D, Crystal Structure Of A Small-chain Dehydrogenase
Length = 223
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 163 SASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAP---Q 219
+A + I T +A++LA IRVN I+PGL T +N R+ + + +
Sbjct: 131 AAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVG 188
Query: 220 RLGHPDEFAQLVQSIITNPLINGEVIRIDG 249
++G + A I N + G VI +DG
Sbjct: 189 KVGEASDIAMAYLFAIQNSYMTGTVIDVDG 218
>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Apo Form)
pdb|3OIC|D Chain D, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Apo Form)
pdb|3OID|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|B Chain B, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|C Chain C, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|D Chain D, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
Length = 258
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 103/260 (39%), Gaps = 27/260 (10%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXL-------CDLPTSEGESVAKELGPDVK 53
M + LVTG + G+GKA + L T+E ++LG V
Sbjct: 1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEE---IEKLGVKVL 57
Query: 54 FAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILL 113
+V +++ ++FG+LDV VN A + + + +
Sbjct: 58 VVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEE------THWDWTMN 111
Query: 114 VNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT 173
+N A+ +A+L+ +N G I++ +S+ + SK+ + +T
Sbjct: 112 INAKALLFCAQEAAKLMEKNG------GGHIVSISSLGSIRYLENYTTVGVSKAALEALT 165
Query: 174 LPMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFL--ARSIPAPQRLGHPDEFAQLV 231
+A +L+ I VN ++ G DT L + + L AR R+ + V
Sbjct: 166 RYLAVELSPKQIIVNAVSGGAIDTDALKHFPNR-EDLLEDARQNTPAGRMVEIKDMVDTV 224
Query: 232 QSIITNP--LINGEVIRIDG 249
+ ++++ +I G+ I +DG
Sbjct: 225 EFLVSSKADMIRGQTIIVDG 244
>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From
Salmonella Enterica Subsp. Enterica Serovar Typhi Str.
Ct18
Length = 258
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 19/200 (9%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKELGPDVKFAP---- 56
+L+ + LVTG + G+G+ L + VA+ + + P
Sbjct: 11 LLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFT 70
Query: 57 ---VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILL 113
+ T+EE Q A + + +LD ++ AG+ + + ++ ++
Sbjct: 71 LDLLTCTAEECRQVADRIAA-HYPRLDGVLHNAGLLGEIGPMSEQDPQI-----WQDVMQ 124
Query: 114 VNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMT 173
VN TF + Q + L D G ++ T+S +G++ AY+ SK GM
Sbjct: 125 VNVNATF----MLTQALLPLLLKSDA--GSLVFTSSSVGRQGRANWGAYATSKFATEGMM 178
Query: 174 LPMARDLAGAGIRVNTIAPG 193
+A + +RVN I PG
Sbjct: 179 QVLADEYQNRSLRVNCINPG 198
>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|B Chain B, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|C Chain C, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|D Chain D, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|E Chain E, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|F Chain F, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|G Chain G, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|H Chain H, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex
Length = 307
Score = 34.3 bits (77), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
N + + + + A + G IIN + G Y+ +K + G+T
Sbjct: 166 NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTR 225
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
A +LA IRVN + PGL + L+ + V +P QR E + +V +
Sbjct: 226 SAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFL 283
Query: 235 ITN--PLINGEVIRIDGALRM 253
++ I G +++DG +
Sbjct: 284 CSSKAKYITGTCVKVDGGYSL 304
>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
pdb|3TN7|B Chain B, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
Length = 257
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL----GPDVKFAP 56
ML+ V ++TG + G+G+A L E +A EL G +V +
Sbjct: 21 MLEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHH 80
Query: 57 VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGI 88
+DV+ E V++ + FG +DV V AG+
Sbjct: 81 LDVSKAESVEEFSKKVLERFGDVDVVVANAGL 112
>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|1E92|B Chain B, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|1E92|C Chain C, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|1E92|D Chain D, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|2BF7|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BF7|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BF7|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BF7|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BFA|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFA|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFA|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFA|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFM|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFM|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFM|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFM|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFO|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFO|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFO|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFO|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFP|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|2BFP|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|2BFP|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|2BFP|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|3H4V|A Chain A, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|B Chain B, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|C Chain C, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|D Chain D, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|E Chain E, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|F Chain F, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|G Chain G, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|H Chain H, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
Length = 288
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
N + + + + A + G IIN + G Y+ +K + G+T
Sbjct: 147 NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTR 206
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
A +LA IRVN + PGL + L+ + V +P QR E + +V +
Sbjct: 207 SAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFL 264
Query: 235 ITN--PLINGEVIRIDGALRM 253
++ I G +++DG +
Sbjct: 265 CSSKAKYITGTCVKVDGGYSL 285
>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The
Mechanism Of Leishmania Pteridine Reductase With Pterin
Metabolism And Antifolate Drug Resistance In Trpanosomes
pdb|1E7W|B Chain B, One Active Site, Two Modes Of Reduction Correlate The
Mechanism Of Leishmania Pteridine Reductase With Pterin
Metabolism And Antifolate Drug Resistance In Trpanosomes
Length = 291
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
N + + + + A + G IIN + G Y+ +K + G+T
Sbjct: 150 NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTR 209
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
A +LA IRVN + PGL + L+ + V +P QR E + +V +
Sbjct: 210 SAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFL 267
Query: 235 ITN--PLINGEVIRIDGALRM 253
++ I G +++DG +
Sbjct: 268 CSSKAKYITGTCVKVDGGYSL 288
>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
pdb|2QHX|B Chain B, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
pdb|2QHX|C Chain C, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
pdb|2QHX|D Chain D, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
Length = 328
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
N + + + + A + G IIN + G Y+ +K + G+T
Sbjct: 187 NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTR 246
Query: 175 PMARDLAGAGIRVNTIAPGLFDTPLLSMLNEKVRNFLARSIPAPQRLGHPDEFAQLVQSI 234
A +LA IRVN + PGL + L+ + V +P QR E + +V +
Sbjct: 247 SAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFL 304
Query: 235 ITN--PLINGEVIRIDGALRM 253
++ I G +++DG +
Sbjct: 305 CSSKAKYITGTCVKVDGGYSL 325
>pdb|3GEM|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3GEM|B Chain B, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3GEM|C Chain C, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3GEM|D Chain D, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
Length = 260
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 106 DDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSAS 165
D+F R V+ + + + L+ +++ + I++ + +G S +AY A+
Sbjct: 120 DNFTRXFSVHXLAPYLINLHCEPLLTASEVAD------IVHISDDVTRKGSSKHIAYCAT 173
Query: 166 KSGIVGMTLPMARDLAGAGIRVNTIAPGLF 195
K+G+ +TL A A ++VN IAP L
Sbjct: 174 KAGLESLTLSFAARFAPL-VKVNGIAPALL 202
>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W73|B Chain B, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W73|C Chain C, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W73|D Chain D, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W8D|A Chain A, Binary Structure Of Human Decr.
pdb|1W8D|B Chain B, Binary Structure Of Human Decr.
pdb|1W8D|C Chain C, Binary Structure Of Human Decr.
pdb|1W8D|D Chain D, Binary Structure Of Human Decr
Length = 302
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 89/223 (39%), Gaps = 23/223 (10%)
Query: 35 DLPTSEGESVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKI 94
D+ + E ++ + G V DV + VQ V G ++ +N A
Sbjct: 61 DVLKATAEQISSQTGNKVHAIQCDVRDPDXVQNTVSELIKVAGHPNIVINNAA------- 113
Query: 95 FNYNKGTVH-SLDDFKRILLVNTVGT-FNVARLSAQLIHENKLNEDGLRGVIINTASIAA 152
N+ T S + +K I + GT F + QLI K ++ +I A
Sbjct: 114 GNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK------GAAFLSITTIYA 167
Query: 153 YEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTP-LLSMLNEK---VR 208
G V +++K+G+ + +A + G R N I PG T S L+ +
Sbjct: 168 ETGSGFVVPSASAKAGVEAXSKSLAAEWGKYGXRFNVIQPGPIKTKGAFSRLDPTGTFEK 227
Query: 209 NFLARSIPAPQRLGHPDEFAQLVQSIITN--PLINGEVIRIDG 249
+ R IP RLG +E A L + ++ ING VI+ DG
Sbjct: 228 EXIGR-IPC-GRLGTVEELANLAAFLCSDYASWINGAVIKFDG 268
>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
pdb|3E03|B Chain B, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
pdb|3E03|C Chain C, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
Length = 274
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHS-LDDFKRILLVNT 116
D+ E+ V+ AV D+FG +D+ VN A + +GT+ + F VN
Sbjct: 70 DIREEDQVRAAVAATVDTFGGIDILVNNASAI-------WLRGTLDTPXKRFDLXQQVNA 122
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
G+F A+ A L H + + + + A+ G Y+ +K G +TL +
Sbjct: 123 RGSFVCAQ--ACLPHLLQAPNPHILTLAPPPSLNPAWWG--AHTGYTLAKXGXSLVTLGL 178
Query: 177 ARDLAGAGIRVNTIAP 192
A + G+ +N + P
Sbjct: 179 AAEFGPQGVAINALWP 194
>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|E Chain E, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|F Chain F, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
Length = 287
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 76/222 (34%), Gaps = 42/222 (18%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCD-----------LPTSEGESVA----KELGP 50
V LVTGGA G G++ L D L TS A ++ G
Sbjct: 12 VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR 71
Query: 51 DVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKR 110
A VDV V + + FGKLDV V AGI C G + F
Sbjct: 72 KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI-CPL-------GAHLPVQAFAD 123
Query: 111 ILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIA-----------AYEGQSGQ 159
V+ VG N + + II T S+A G
Sbjct: 124 AFDVDFVGVINTVHAALPYLTSG--------ASIITTGSVAGLIAAAQPPGAGGPQGPGG 175
Query: 160 VAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDTPLLS 201
YS +K + TL +A LA IR N I P +T +L+
Sbjct: 176 AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLN 217
>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon
Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp
Length = 235
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVAKEL----GPDVKFAPVDVTS 61
V ++TG + G+G+A L E +A EL G +V + +DV+
Sbjct: 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 63
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGI 88
E V++ + FG +DV V AG+
Sbjct: 64 AESVEEFSKKVLERFGDVDVVVANAGL 90
>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
Length = 281
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 52/139 (37%), Gaps = 14/139 (10%)
Query: 58 DVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTV 117
DV + V + F +LD+ VN AG + + + + I+ N
Sbjct: 91 DVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEE-----VTFEQWNGIVAANLT 145
Query: 118 GTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMA 177
G F L Q + G IIN SI+A + Y+A+K I G+T A
Sbjct: 146 GAF----LCTQHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTA 201
Query: 178 RDLAGAGIRVNTIAPGLFD 196
D R + IA G D
Sbjct: 202 LDG-----RXHDIACGQID 215
>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073
pdb|3F5Q|B Chain B, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073
pdb|3GZ4|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073 Complexed With Nadph
pdb|3GZ4|B Chain B, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073 Complexed With Nadph
Length = 262
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 18/199 (9%)
Query: 1 MLKGVVGLVTGGASGLGKATXXXXXXXXXXXXLCDLPTSEGESVA----KELGPDVKFAP 56
+L + LVTG + G+G+ L + VA +E G ++
Sbjct: 11 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFI 70
Query: 57 VDV--TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLV 114
+D+ + ED Q+ ++ +LD ++ AG+ + V ++ ++ V
Sbjct: 71 LDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQV-----WQDVMQV 125
Query: 115 NTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTL 174
N TF + Q + L D G ++ T+S +G++ AY+ASK GM
Sbjct: 126 NVNATF----MLTQALLPLLLKSDA--GSLVFTSSSVGRQGRANWGAYAASKFATEGMMQ 179
Query: 175 PMARDLAGAGIRVNTIAPG 193
+A D +RVN I PG
Sbjct: 180 VLA-DEYQQRLRVNCINPG 197
>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase (Nadph) From Sinorhizobium Meliloti
Length = 324
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 8 LVTGGASGLGKATXXX-----XXXXXXXXXLCDLPTSEGESVA---KELGPDVKFAPVDV 59
L+TG +SG G+ T + S E++A ++ D++ +DV
Sbjct: 9 LITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARDNDVDLRTLELDV 68
Query: 60 TSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNTVGT 119
S+ V +A+ G++DV ++ AG + + + F + +N + T
Sbjct: 69 QSQVSVDRAIDQIIGEDGRIDVLIHNAGHXV------FGPAEAFTPEQFAELYDINVLST 122
Query: 120 FNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVA-YSASKSGIVGMTLPMAR 178
V R A L H + G++I +S ++ G +A Y A+K+ + + AR
Sbjct: 123 QRVNR--AALPHXRRQKH----GLLIWISSSSSAGGTPPYLAPYFAAKAAXDAIAVQYAR 176
Query: 179 DLAGAGIRVNTIAPGLF 195
+L+ GI + I PG F
Sbjct: 177 ELSRWGIETSIIVPGAF 193
>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
pdb|3KVO|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
Length = 346
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 57 VDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTVHSLDDFKRILLVNT 116
VDV E+ + AV FG +D+ VN A A + N LD ++ VNT
Sbjct: 108 VDVRDEQQISAAVEKAIKKFGGIDILVNNAS---AISLTNTLDTPTKRLD---LMMNVNT 161
Query: 117 VGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPM 176
GT+ ++ + ++K+ +N + + AY+ +K G+ L M
Sbjct: 162 RGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQ----HCAYTIAKYGMSMYVLGM 217
Query: 177 ARDLAGAGIRVNTIAP 192
A + G I VN + P
Sbjct: 218 AEEFKGE-IAVNALWP 232
>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301
pdb|3F5S|B Chain B, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301
pdb|3GY0|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301 Complexed With Nadp
Length = 255
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
G ++ T+S +G++ AY+ASK GM +A D +RVN I PG
Sbjct: 143 GSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA-DEYQQRLRVNCINPG 193
>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From
E.Coli
pdb|3F1L|B Chain B, The 0.95 A Structure Of An Oxidoreductase, Ycik From
E.Coli
Length = 252
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
G ++ T+S +G++ AY+ASK GM +A D +RVN I PG
Sbjct: 145 GSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA-DEYQQRLRVNCINPG 195
>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
Str. Lt2 In Complex With Nadp And Acetate.
pdb|3IAH|B Chain B, Crystal Structure Of Short Chain Dehydrogenase (ycik) From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
Str. Lt2 In Complex With Nadp And Acetate
Length = 256
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
G ++ T+S +G++ AY+ SK G +A + +RVN I PG
Sbjct: 148 GSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQNRSLRVNCINPG 199
>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|B Chain B, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|C Chain C, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|D Chain D, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
Length = 285
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 43 SVAKELGPDVKFAPVDVTSEEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKIFNYNKGTV 102
+AK G D+ DV+ +ED++ ++++G LD+ V+ S A+ KG V
Sbjct: 65 EIAKGFGSDL-VVKCDVSLDEDIKNLKKFLEENWGSLDIIVH----SIAYAPKEEFKGGV 119
Query: 103 --HSLDDFKRILLVNTVGTFNVARLSAQLIHENKLNEDGLRGVIINTASIAAYEGQSGQV 160
S + FK + + +++ L+ +L+ L E G G I+ + A +
Sbjct: 120 IDTSREGFK---IAMDISVYSLIALTRELL---PLME-GRNGAIVTLSYYGAEKVVPHYN 172
Query: 161 AYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
+K+ + +A D+A G R+N I+ G
Sbjct: 173 VMGIAKAALESTVRYLAYDIAKHGHRINAISAG 205
>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2
Length = 276
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXX-XXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTS 61
V LVTGG G+G A L + G++ ++L G +F +D+
Sbjct: 6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKI 94
+ ++ + +G LDV VN AGI AFK+
Sbjct: 66 LQSIRALRDFLRKEYGGLDVLVNNAGI--AFKV 96
>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With
Hydroxy-pp
pdb|3BHI|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In
Complex With Nadp
pdb|3BHJ|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In
Complex With Glutathione
pdb|3BHM|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In
Complex With S-Hydroxymethylglutathione
Length = 276
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 6 VGLVTGGASGLGKATXXXXXXXXX-XXXLCDLPTSEGESVAKEL---GPDVKFAPVDVTS 61
V LVTGG G+G A L + G++ ++L G +F +D+
Sbjct: 6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 62 EEDVQKAVLLCKDSFGKLDVNVNCAGISCAFKI 94
+ ++ + +G LDV VN AGI AFK+
Sbjct: 66 LQSIRALRDFLRKEYGGLDVLVNNAGI--AFKV 96
>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster
Length = 267
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 112 LLVNTVGTFNVARLSAQLIHEN-KLNEDGLRGV----IINTASI-AAYEGQS--GQVAYS 163
L NTV +A+ L+ + K NE GV IIN +SI + +G + G AY
Sbjct: 131 LQTNTVVPIXLAKACLPLLKKAAKANESQPXGVGRAAIINXSSILGSIQGNTDGGXYAYR 190
Query: 164 ASKSGIVGMTLPMARDLAGAGIRVNTIAPGLFDT 197
SKS + T ++ DL I ++ PG T
Sbjct: 191 TSKSALNAATKSLSVDLYPQRIXCVSLHPGWVKT 224
>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From
Shigella Flexneri
pdb|3E9Q|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase From
Shigella Flexneri
Length = 273
Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
G ++ T+S +G++ AY+ASK G +A D +RVN I PG
Sbjct: 166 GSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLA-DEYQQRLRVNCINPG 216
>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase,
Complexed With Nadp+ At 2.6a Resolution
Length = 252
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 142 GVIINTASIAAYEGQSGQVAYSASKSGIVGMTLPMARDLAGAGIRVNTIAPG 193
G ++ T+S +G++ AY+ASK G +A D +RVN I PG
Sbjct: 145 GSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLA-DEYQQRLRVNCINPG 195
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,852,128
Number of Sequences: 62578
Number of extensions: 261319
Number of successful extensions: 1266
Number of sequences better than 100.0: 262
Number of HSP's better than 100.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 706
Number of HSP's gapped (non-prelim): 267
length of query: 254
length of database: 14,973,337
effective HSP length: 97
effective length of query: 157
effective length of database: 8,903,271
effective search space: 1397813547
effective search space used: 1397813547
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)