RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12834
(275 letters)
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 52.3 bits (126), Expect = 3e-10
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 199 TGERPYQCDICNATFIYPEHFKKH-RRIHTGEKPYVCEV 236
+ +PY C C F P+H H +++HT E+P+ C+V
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 49.2 bits (118), Expect = 4e-09
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 94 TGNRPFICRVCGKSFVRKAEVKDHER-THTGEKPYQCE 130
+ +P+IC+ CGK F R + H + HT E+P++C+
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 46.1 bits (110), Expect = 5e-08
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDI 208
K Y C SC K F R L+ HIK HT ERP++C +
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 36.1 bits (84), Expect = 1e-04
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 40 KRPFSCEKCDKSFYTQQNLVQHEK-THSGSKDFVC 73
+P+ C+ C K F +L H K H+ + C
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 35.4 bits (82), Expect = 3e-04
Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 19/56 (33%)
Query: 122 TGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPC 177
+ KPY C+ CG F S+ +L H + H +++ + C
Sbjct: 1 SVGKPYICQSCGKGF-------------------SRPDHLNGHIKQVHTSERPHKC 37
Score = 33.8 bits (78), Expect = 0.001
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 9 TGARPYECKTCKKTFVSKYTYKAHL-VTHTDRKRPFSCE 46
+ +PY C++C K F H+ HT + P C+
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSER-PHKCQ 38
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 50.3 bits (121), Expect = 1e-09
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGE 229
H+GE+PY C C F +H+R+HTGE
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 49.2 bits (118), Expect = 3e-09
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 92 VHTGNRPFICRVCGKSFVRKAEVKDHERTHTGE 124
+H+G +P+ C CGK+F R + + H+R HTGE
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 38.8 bits (91), Expect = 2e-05
Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 65 HSGSKDFVCTECGKAFGTLRNLEVHLAVHTG 95
HSG K + C ECGKAF L H VHTG
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 38.0 bits (89), Expect = 3e-05
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 8 HTGARPYECKTCKKTFVSKYTYKAHLVTHT 37
H+G +PY C C K F H HT
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHT 31
Score = 37.6 bits (88), Expect = 4e-05
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 36 HTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
H+ K P+ C +C K+F LVQH++ H+G
Sbjct: 2 HSGEK-PYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 34.9 bits (81), Expect = 4e-04
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 20/49 (40%)
Query: 121 HTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH 169
H+GEKPY C CG F S+ S L H+R H
Sbjct: 2 HSGEKPYGCVECGKAF-------------------SRSSILVQHQR-VH 30
Score = 29.1 bits (66), Expect = 0.038
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 169 HFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGE 201
H +K Y C C KAF R +L H + HTGE
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQR-VHTGE 33
Score = 27.2 bits (61), Expect = 0.22
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 225 IHTGEKPYVCE 235
IH+GEKPY C
Sbjct: 1 IHSGEKPYGCV 11
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 45.5 bits (108), Expect = 6e-08
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 101 CRVCGKSFVRKAEVKDHERTHTGEKPYQCEF 131
CGKSF K +K+H + H+ + Y CEF
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 41.6 bits (98), Expect = 2e-06
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 204 YQCD--ICNATFIYPEHFKKHRRIHTGEKPYVCE 235
+ C C +F + +H K+H ++H+ + Y+CE
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 35.1 bits (81), Expect = 4e-04
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 71 FVCTE--CGKAFGTLRNLEVHLAVHTGNRPFIC 101
F C E CGK+F ++L+ H+ +H+ R +IC
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 33.5 bits (77), Expect = 0.001
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 176 PCTSCPKAFKRRRLLDYHIKAAHTGERPYQCD 207
P +C K+F ++ L H+K H+ R Y C+
Sbjct: 5 PEPACGKSFNFKKHLKEHMKL-HSDTRDYICE 35
Score = 31.6 bits (72), Expect = 0.006
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 44 SCEKCDKSFYTQQNLVQHEKTHSGSKDFVC 73
C KSF +++L +H K HS ++D++C
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 27.0 bits (60), Expect = 0.28
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 14 YECK--TCKKTFVSKYTYKAHLVTHTDRKRPFSCE 46
+ C C K+F K K H+ H+D + + CE
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTR-DYICE 35
Score = 23.5 bits (51), Expect = 5.3
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 4 HLVSHTGARPYECK 17
H+ H+ R Y C+
Sbjct: 22 HMKLHSDTRDYICE 35
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 45.2 bits (107), Expect = 1e-07
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGE 229
R Y+CD C +F + KHRR HTGE
Sbjct: 7 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 42.5 bits (100), Expect = 8e-07
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 89 HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGE 124
R + C CGKSF +++ H RTHTGE
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 38.2 bits (89), Expect = 3e-05
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 60 QHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTG 95
+ E + + C ECGK+F +L H HTG
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 36.7 bits (85), Expect = 1e-04
Identities = 6/25 (24%), Positives = 9/25 (36%)
Query: 117 HERTHTGEKPYQCEFCGAQFRFKGS 141
E + Y+C+ CG F
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSD 27
Score = 35.1 bits (81), Expect = 4e-04
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
+R+ + C++C KSF +L +H +TH+G
Sbjct: 3 SEWQQRERR-RYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 34.8 bits (80), Expect = 4e-04
Identities = 10/34 (29%), Positives = 12/34 (35%)
Query: 4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHT 37
R Y+C C K+F H THT
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36
Score = 32.8 bits (75), Expect = 0.002
Identities = 4/27 (14%), Positives = 9/27 (33%)
Query: 221 KHRRIHTGEKPYVCEVRLAVFYYVTCL 247
+ + Y C+ F + + L
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDL 28
Score = 26.7 bits (59), Expect = 0.38
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 164 HKRATHFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGE 201
+ +RY C C K+F L H + HTGE
Sbjct: 3 SEW-QQRERRRYKCDECGKSFSHSSDLSKHRR-THTGE 38
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 45.0 bits (107), Expect = 1e-07
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGEK 230
HTGE+PY C C+ TF + H + +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 43.5 bits (103), Expect = 3e-07
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 92 VHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEK 125
HTG +P+ C C K+F +K + H + +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 37.0 bits (86), Expect = 9e-05
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 8 HTGARPYECKTCKKTFVSKYTYKAHLVTHTD 38
HTG +PY C C KTF K H + D
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 36.6 bits (85), Expect = 1e-04
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 63 KTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTG 95
+TH+G K + C+ C K F + L++H +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 36.6 bits (85), Expect = 1e-04
Identities = 15/55 (27%), Positives = 19/55 (34%), Gaps = 20/55 (36%)
Query: 119 RTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDK 173
RTHTGEKPY C C F Q+ L H + + +
Sbjct: 1 RTHTGEKPYACSHCDKTF-------------------RQKQLLDMHFK-RYHDPN 35
Score = 35.8 bits (83), Expect = 2e-04
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 35 THTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
THT K P++C CDK+F +Q L H K +
Sbjct: 2 THTGEK-PYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 27.7 bits (62), Expect = 0.16
Identities = 9/12 (75%), Positives = 9/12 (75%)
Query: 224 RIHTGEKPYVCE 235
R HTGEKPY C
Sbjct: 1 RTHTGEKPYACS 12
Score = 26.9 bits (60), Expect = 0.26
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGE 201
TH +K Y C+ C K F++++LLD H K +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDP 34
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 43.4 bits (103), Expect = 3e-07
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 97 RPFICRVCGKSFVRKAEVKDHERTHTGEK 125
R F+C VC ++F R+ +K H R+HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 42.2 bits (100), Expect = 1e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 RPYQCDICNATFIYPEHFKKHRRIHTGEK 230
R + C++C F EH K+H R HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 36.4 bits (85), Expect = 1e-04
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
R F CE C ++F Q++L +H ++H+ K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 33.0 bits (76), Expect = 0.002
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 69 KDFVCTECGKAFGTLRNLEVHLAVHTGNR 97
+ FVC C +AF +L+ H HT +
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 31.1 bits (71), Expect = 0.010
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 12 RPYECKTCKKTFVSKYTYKAHLVTHTDRK 40
R + C+ C + F + K H +HT+ K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 28.4 bits (64), Expect = 0.083
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGER 202
+ + C C +AF R+ L H + +HT E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEK 29
Score = 24.5 bits (54), Expect = 1.9
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 20/49 (40%)
Query: 125 KPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDK 173
+ + CE C F +++ +L+ H R +H N+K
Sbjct: 1 RSFVCEVCTRAF-------------------ARQEHLKRHYR-SHTNEK 29
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 43.8 bits (103), Expect = 4e-07
Identities = 8/47 (17%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 186 RRRLLDYHIKAAHTGERPYQCDICNA--TFIYPEHFKKHRRIHTGEK 230
R +D ++K ++ ++C TF + + H + H ++
Sbjct: 3 PRGSIDKYVK--EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 35.7 bits (82), Expect = 2e-04
Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 93 HTGNRPFICRVC--GKSFVRKAEVKDHERTHTGEK 125
++ F C K+F R+ ++ H +TH ++
Sbjct: 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 30.7 bits (69), Expect = 0.015
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 116 DHERTHTGEKPYQCEFCGAQFRFKGSS 142
D +K ++C F G FK
Sbjct: 8 DKYVKEMPDKTFECLFPGCTKTFKRRY 34
Score = 27.2 bits (60), Expect = 0.27
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 26 KYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
+ + ++ D+ C K+F + N+ H +TH +
Sbjct: 4 RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.8 bits (59), Expect = 0.41
Identities = 9/42 (21%), Positives = 13/42 (30%), Gaps = 2/42 (4%)
Query: 58 LVQHEKTHSGSKDFVCTEC--GKAFGTLRNLEVHLAVHTGNR 97
+ K F C K F N+ H+ H +R
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 23.4 bits (50), Expect = 7.4
Identities = 3/20 (15%), Positives = 7/20 (35%), Gaps = 1/20 (5%)
Query: 216 PEHFKKHRRIHTGEKPYVCE 235
K+ + +K + C
Sbjct: 4 RGSIDKYVK-EMPDKTFECL 22
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 43.1 bits (101), Expect = 7e-07
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVH 93
+ + C+ C KSF + +H H G + + C CGK F +L H+ +H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 42.7 bits (100), Expect = 1e-06
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 69 KDFVCTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTH 121
K + C +CGK+F + H+++H G RP+ C VCGK F K + H + H
Sbjct: 2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 38.1 bits (88), Expect = 5e-05
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 12 RPYECKTCKKTFVSKYTYKAHLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTH 65
+ Y C+ C K+F K H+ + RP+ C C K F + +LV H K H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 36.6 bits (84), Expect = 1e-04
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 172 DKRYPCTSCPKAFKRRRLLDYHIKAAHTGERPYQCDICNATFIYPEHFKKHRRIH 226
DK YPC C K+F + D H+ H G RPY C +C F H H +IH
Sbjct: 1 DKLYPC-QCGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 32.3 bits (73), Expect = 0.004
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 97 RPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFKGS 141
+ + C+ CGKSF K++ H H G +PY C CG +F+ K
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHH 45
Score = 29.7 bits (66), Expect = 0.052
Identities = 18/72 (25%), Positives = 25/72 (34%), Gaps = 21/72 (29%)
Query: 124 EKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDKRYPCTSCPKA 183
+K Y C+ CG F + +S H H + Y C C K
Sbjct: 1 DKLYPCQ-CGKSF-------------------THKSQRDRHMS-MHLGLRPYGCGVCGKK 39
Query: 184 FKRRRLLDYHIK 195
FK + L H+K
Sbjct: 40 FKMKHHLVGHMK 51
Score = 27.0 bits (59), Expect = 0.43
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 201 ERPYQCDICNATFIYPEHFKKHRRIHTGEKPYVCEV 236
++ Y C C +F + +H +H G +PY C V
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGV 35
Score = 24.3 bits (52), Expect = 4.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTH 36
H+ H G RPY C C K F K+ H+ H
Sbjct: 21 HMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 42.4 bits (100), Expect = 8e-07
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTGE 229
+G+RP+ C IC + F + +H ++HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 40.9 bits (96), Expect = 3e-06
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 93 HTGNRPFICRVCGKSFVRKAEVKDHERTHTGE 124
+G RPF+CR+C +F KA H + HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 37.0 bits (86), Expect = 6e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 8 HTGARPYECKTCKKTFVSKYTYKAHLVTHTD 38
+G RP+ C+ C F +K HL HTD
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 35.1 bits (81), Expect = 4e-04
Identities = 15/32 (46%), Positives = 16/32 (50%)
Query: 65 HSGSKDFVCTECGKAFGTLRNLEVHLAVHTGN 96
SG + FVC C AF T N HL VHT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 33.2 bits (76), Expect = 0.002
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHSGS 68
RPF C C +F T+ N +H K H+ +
Sbjct: 6 RPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 29.3 bits (66), Expect = 0.044
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 121 HTGEKPYQCEFCGAQFRFK 139
+G++P+ C C + F K
Sbjct: 2 SSGKRPFVCRICLSAFTTK 20
Score = 23.6 bits (51), Expect = 4.1
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 169 HFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGE 201
+ + C C AF + H+K HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTDT 33
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 41.9 bits (99), Expect = 1e-06
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 198 HTGERPYQCDICNATFIYPEHFKKH-RRIHTGE 229
H+GE+PY+C IC+A F K H + HT
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 40.7 bits (96), Expect = 3e-06
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 19/51 (37%)
Query: 119 RTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH 169
RTH+GEKPY+C C A+F +Q ++ H H
Sbjct: 1 RTHSGEKPYECYICHARF-------------------TQSGTMKMHILQKH 32
Score = 39.2 bits (92), Expect = 1e-05
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 92 VHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEK 125
H+G +P+ C +C F + +K H E
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 35.7 bits (83), Expect = 2e-04
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 63 KTHSGSKDFVCTECGKAFGTLRNLEVH-LAVHTGN 96
+THSG K + C C F +++H L HT N
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 33.8 bits (78), Expect = 0.001
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 8 HTGARPYECKTCKKTFVSKYTYKAHLVTHT 37
H+G +PYEC C F T K H++
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 32.6 bits (75), Expect = 0.003
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 168 THFNDKRYPCTSCPKAFKRRRLLDYHIKAAHTGE 201
TH +K Y C C F + + HI HT
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 32.3 bits (74), Expect = 0.003
Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 1/33 (3%)
Query: 35 THTDRKRPFSCEKCDKSFYTQQNLVQHEKTHSG 67
TH+ K P+ C C F + H
Sbjct: 2 THSGEK-PYECYICHARFTQSGTMKMHILQKHT 33
Score = 28.8 bits (65), Expect = 0.066
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 224 RIHTGEKPYVCEV 236
R H+GEKPY C +
Sbjct: 1 RTHSGEKPYECYI 13
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 40.0 bits (94), Expect = 5e-06
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 97 RPFICRVCGKSFVRKAEVKDHERTHTGEK 125
+ F C C K F+R + H +TH +K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 40.0 bits (94), Expect = 6e-06
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 202 RPYQCDICNATFIYPEHFKKHRRIHTGEK 230
+ + C C F+ +H KH + H +K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 33.5 bits (77), Expect = 0.001
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
+ F+C +C K F +L +H KTH K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 30.8 bits (70), Expect = 0.011
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 69 KDFVCTECGKAFGTLRNLEVHLAVHTGNR 97
K F C EC K F +L H+ H +
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 28.8 bits (65), Expect = 0.055
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 12 RPYECKTCKKTFVSKYTYKAHLVTHTDRK 40
+ + C C K F+ H+ TH ++K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 26.5 bits (59), Expect = 0.36
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGER 202
K++ C CPK F R L HIK H ++
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIK-THQNKK 29
Score = 23.8 bits (52), Expect = 3.6
Identities = 10/49 (20%), Positives = 15/49 (30%), Gaps = 20/49 (40%)
Query: 125 KPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATHFNDK 173
K + C C +F + +L H + TH N K
Sbjct: 1 KKFACPECPKRF-------------------MRSDHLSKHIK-THQNKK 29
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 40.1 bits (94), Expect = 7e-06
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 198 HTGERPYQCDICNATFIYPEHFKKHRRIHTG 228
TG +P+QC C+ +F +H HR+ H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 39.3 bits (92), Expect = 1e-05
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 89 HLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTG 123
TG +PF C C +SF R + H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 37.0 bits (86), Expect = 7e-05
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 20/53 (37%)
Query: 117 HERTHTGEKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH 169
R TG KP+QC C F S+ +L H++ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSF-------------------SRSDHLALHRK-RH 34
Score = 35.1 bits (81), Expect = 3e-04
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 4 HLVSHTGARPYECKTCKKTFVSKYTYKAHLVTHT 37
TG +P++C C ++F H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 34.7 bits (80), Expect = 5e-04
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 61 HEKTHSGSKDFVCTECGKAFGTLRNLEVHLAVHTG 95
+ +G K F C +C ++F +L +H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 34.3 bits (79), Expect = 7e-04
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 32 HLVTHTDRKRPFSCEKCDKSFYTQQNLVQHEKTH 65
T K PF C CD+SF +L H K H
Sbjct: 2 STRGSTGIK-PFQCPDCDRSFSRSDHLALHRKRH 34
Score = 32.8 bits (75), Expect = 0.003
Identities = 8/26 (30%), Positives = 9/26 (34%)
Query: 222 HRRIHTGEKPYVCEVRLAVFYYVTCL 247
R TG KP+ C F L
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHL 27
Score = 25.1 bits (55), Expect = 1.4
Identities = 9/32 (28%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 164 HKRATHFNDKRYPCTSCPKAFKRRRLLDYHIK 195
R K + C C ++F R L H K
Sbjct: 2 STR-GSTGIKPFQCPDCDRSFSRSDHLALHRK 32
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 39.5 bits (93), Expect = 8e-06
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 201 ERPYQCDICNATFIYPEHFKKHRRIHTG 228
++P+QC IC F +H H R HTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 38.4 bits (90), Expect = 2e-05
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 97 RPFICRVCGKSFVRKAEVKDHERTHTG 123
+PF CR+C ++F R + H RTHTG
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 35.3 bits (82), Expect = 3e-04
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHSG 67
+PF C C ++F +L H +TH+G
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 33.0 bits (76), Expect = 0.002
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 69 KDFVCTECGKAFGTLRNLEVHLAVHTG 95
K F C C + F +L H+ HTG
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 31.0 bits (71), Expect = 0.009
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 12 RPYECKTCKKTFVSKYTYKAHLVTHT 37
+P++C+ C + F H+ THT
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHT 27
Score = 27.2 bits (61), Expect = 0.21
Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 20/46 (43%)
Query: 124 EKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKRATH 169
+KP+QC C F S+ +L +H R TH
Sbjct: 1 QKPFQCRICMRNF-------------------SRSDHLTTHIR-TH 26
Score = 24.5 bits (54), Expect = 1.6
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTG 200
K + C C + F R L HI+ HTG
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIR-THTG 28
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 39.2 bits (92), Expect = 1e-05
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 97 RPFICRV--CGKSFVRKAEVKDHERTHTGEK 125
RPF+C CGK F R E++ H+RTHTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 37.3 bits (87), Expect = 5e-05
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 202 RPYQCDI--CNATFIYPEHFKKHRRIHTGEK 230
RP+ C C F + ++H+R HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.5 bits (72), Expect = 0.006
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 41 RPFSC--EKCDKSFYTQQNLVQHEKTHSGSK 69
RPF C C K F L +H++TH+G K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 28.8 bits (65), Expect = 0.051
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 69 KDFVCT--ECGKAFGTLRNLEVHLAVHTGNR 97
+ F+CT CGK F L+ H HTG +
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 26.5 bits (59), Expect = 0.37
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Query: 12 RPYEC--KTCKKTFVSKYTYKAHLVTHTDRK 40
RP+ C C K F + H THT K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 37.3 bits (87), Expect = 6e-05
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 97 RPFIC--RVCGKSFVRKAEVKDHERTHTGE 124
+P C C KS+ R +K H R+HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 34.6 bits (80), Expect = 5e-04
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 202 RPYQCDI--CNATFIYPEHFKKHRRIHTGE 229
+P++C C ++ E+ K H R HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 30.0 bits (68), Expect = 0.021
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 41 RPFSC--EKCDKSFYTQQNLVQHEKTHSG 67
+P C E C KS+ +NL H ++H+G
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 28.8 bits (65), Expect = 0.047
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 69 KDFVCTE--CGKAFGTLRNLEVHLAVHTG 95
K CT C K++ L NL+ HL HTG
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 26.5 bits (59), Expect = 0.31
Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 12 RPYECK--TCKKTFVSKYTYKAHLVTHT 37
+P++C C+K++ K HL +HT
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHT 28
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 34.3 bits (79), Expect = 6e-04
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 97 RPFIC--RVCGKSFVRKAEVKDHERTHTGE 124
+PF C CGK F ++ H R HTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 32.0 bits (73), Expect = 0.004
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 202 RPYQCDI--CNATFIYPEHFKKHRRIHTGE 229
+P+QC C F + + H RIHTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 27.7 bits (62), Expect = 0.13
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 41 RPFSC--EKCDKSFYTQQNLVQHEKTHSG 67
+PF C E C K F NL H + H+G
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29
Score = 27.0 bits (60), Expect = 0.22
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 69 KDFVCTE--CGKAFGTLRNLEVHLAVHTG 95
K F CT CGK F NL H+ +HTG
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29
Score = 25.4 bits (56), Expect = 1.0
Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 12 RPYECK--TCKKTFVSKYTYKAHLVTHT 37
+P++C C K F + + H+ HT
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT 28
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 33.8 bits (78), Expect = 8e-04
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 97 RPFIC--RVCGKSFVRKAEVKDHERTHTG 123
RP+ C C + F R A++ H R HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 31.5 bits (72), Expect = 0.006
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 202 RPYQCDI--CNATFIYPEHFKKHRRIHTG 228
RPY C + C+ F +H RIHTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 30.0 bits (68), Expect = 0.018
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 41 RPFSC--EKCDKSFYTQQNLVQHEKTHSG 67
RP++C E CD+ F +L +H + H+G
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 28.4 bits (64), Expect = 0.078
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 69 KDFVCTE--CGKAFGTLRNLEVHLAVHTG 95
+ + C C + F +L H+ +HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 25.7 bits (57), Expect = 0.63
Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 12 RPYECK--TCKKTFVSKYTYKAHLVTHT 37
RPY C +C + F H+ HT
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHT 28
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 33.7 bits (78), Expect = 0.001
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 97 RPFICRVCGKSFVRKAEVKDHERTHT 122
+P+ C CGK+F + + + +H+R HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 32.6 bits (75), Expect = 0.002
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 202 RPYQCDICNATFIYPEHFKKHRRIHT 227
+PY+C C F H+RIHT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 31.0 bits (71), Expect = 0.009
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTHS 66
+P+ C +C K+F L+ H++ H+
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 29.1 bits (66), Expect = 0.042
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 69 KDFVCTECGKAFGTLRNLEVHLAVHT 94
K + C ECGKAF L H +HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 28.7 bits (65), Expect = 0.054
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 12 RPYECKTCKKTFVSKYTYKAHLVTHT 37
+PY+C C K F H HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 23.3 bits (51), Expect = 5.1
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 19/42 (45%)
Query: 125 KPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKR 166
KPY+C CG F SQ S L +H+R
Sbjct: 1 KPYKCLECGKAF-------------------SQNSGLINHQR 23
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 33.8 bits (78), Expect = 0.001
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 201 ERPYQCDI--CNATFIYPEHFKKHRRIHTGE 229
+RPY CD C+ F+ +H++ H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 33.5 bits (77), Expect = 0.001
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 97 RPFICRV--CGKSFVRKAEVKDHERTHTGE 124
RP+ C C K+FVR ++ H+++H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 30.0 bits (68), Expect = 0.022
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 41 RPFSC--EKCDKSFYTQQNLVQHEKTHSG 67
RP+SC CDK+F +L++H+K+H
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 26.9 bits (60), Expect = 0.24
Identities = 8/29 (27%), Positives = 11/29 (37%), Gaps = 2/29 (6%)
Query: 69 KDFVCTE--CGKAFGTLRNLEVHLAVHTG 95
+ + C C KAF +L H H
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 25.0 bits (55), Expect = 1.3
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 12 RPYECK--TCKKTFVSKYTYKAHLVTHTDR 39
RPY C C K FV + H +H ++
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 22.7 bits (49), Expect = 7.7
Identities = 8/43 (18%), Positives = 14/43 (32%), Gaps = 17/43 (39%)
Query: 124 EKPYQCEFCGAQFRFKGSSGTESIDKLLLCFLSQRSNLQSHKR 166
++PY C+ G F + +L HK+
Sbjct: 1 DRPYSCDHPGCDKAF-----------------VRNHDLIRHKK 26
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 31.6 bits (72), Expect = 0.006
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 97 RPFICRV--CGKSFVRKAEVKDHERTHT 122
RP++C C K F + +K H TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 29.2 bits (66), Expect = 0.038
Identities = 10/28 (35%), Positives = 11/28 (39%), Gaps = 2/28 (7%)
Query: 202 RPYQCDI--CNATFIYPEHFKKHRRIHT 227
RPY C CN F + K H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 27.3 bits (61), Expect = 0.17
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 41 RPFSC--EKCDKSFYTQQNLVQHEKTHS 66
RP+ C + C+K F NL H TH+
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 25.8 bits (57), Expect = 0.55
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 69 KDFVCTE--CGKAFGTLRNLEVHLAVHT 94
+ +VC C K F NL+ H+ H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 25.0 bits (55), Expect = 1.0
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 12 RPYECK--TCKKTFVSKYTYKAHLVTHT 37
RPY C C K F K+H++TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 30.7 bits (69), Expect = 0.010
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 97 RPFICRVCGKSFVRKAEVKDHERTHTGE 124
R +C CGK+FV +++K H+ HTGE
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
Score = 29.2 bits (65), Expect = 0.041
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 69 KDFVCTECGKAFGTLRNLEVHLAVHTG 95
+ VC ECGKAF L+ H VHTG
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTG 27
Score = 24.2 bits (52), Expect = 2.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 202 RPYQCDICNATFIYPEHFKKHRRIHTGE 229
R + C C F+ K+H+ +HTGE
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 30.6 bits (69), Expect = 0.012
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 97 RPFICRVCGKSFVRKAEVKDHERTH 121
+PF C +CG+ F R E K H + H
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIH 26
Score = 27.9 bits (62), Expect = 0.12
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 201 ERPYQCDICNATFIYPEHFKKHRRIH 226
E+P+ CDIC F + K+H +IH
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 25.6 bits (56), Expect = 0.90
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 40 KRPFSCEKCDKSFYTQQNLVQHEKTH 65
++PF+C+ C + F +H K H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 23.2 bits (50), Expect = 6.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 124 EKPYQCEFCGAQF 136
EKP+ C+ CG +F
Sbjct: 1 EKPFACDICGRKF 13
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 29.3 bits (65), Expect = 0.042
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 202 RPYQCDICNATFIYPEHFKKHRRIHTGEKPY 232
+ C+IC F H +H+ H+GEKPY
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 28.5 bits (63), Expect = 0.071
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 101 CRVCGKSFVRKAEVKDHERTHTGEKPY 127
C +CGK F + H+ +H+GEKPY
Sbjct: 8 CEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 26.6 bits (58), Expect = 0.35
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 69 KDFVCTECGKAFGTLRNLEVHLAVHTGNRPF 99
K C CGK F + +L H H+G +P+
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 25.0 bits (54), Expect = 1.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 40 KRPFSCEKCDKSFYTQQNLVQHEKTHSGSKDF 71
++ +CE C K F +L +H+ +HSG K +
Sbjct: 3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 24.3 bits (52), Expect = 2.8
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 173 KRYPCTSCPKAFKRRRLLDYHIKAAHTGERPY 204
K+ C C K F+ L+ H K +H+GE+PY
Sbjct: 4 KQVACEICGKIFRDVYHLNRH-KLSHSGEKPY 34
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 28.9 bits (64), Expect = 0.059
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 98 PFICRVCGKSFVRKAEVKDHERTHTG 123
P C VCGK F RK ++K H R HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 25.0 bits (54), Expect = 1.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 203 PYQCDICNATFIYPEHFKKHRRIHTG 228
P++C++C F + K H R HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 24.3 bits (52), Expect = 2.3
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 42 PFSCEKCDKSFYTQQNLVQHEKTHSG 67
P CE C K F + L H + H+G
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 22.7 bits (48), Expect = 9.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 13 PYECKTCKKTFVSKYTYKAHLVTHT 37
P++C+ C K F K K H+ HT
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHT 25
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 28.9 bits (65), Expect = 0.13
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 43 FSCEKCDKSFYTQQNLVQHEKT 64
C C + F NL H ++
Sbjct: 16 HRCLACARYFIDSTNLKTHFRS 37
Score = 26.2 bits (58), Expect = 1.0
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 14 YECKTCKKTFVSKYTYKAHLVTHTDRKR 41
+ C C + F+ K H + +KR
Sbjct: 16 HRCLACARYFIDSTNLKTHFRSKDHKKR 43
Score = 23.5 bits (51), Expect = 9.1
Identities = 7/24 (29%), Positives = 9/24 (37%)
Query: 67 GSKDFVCTECGKAFGTLRNLEVHL 90
G C C + F NL+ H
Sbjct: 12 GGGLHRCLACARYFIDSTNLKTHF 35
Score = 23.5 bits (51), Expect = 9.3
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 99 FICRVCGKSFVRKAEVKDHERT 120
C C + F+ +K H R+
Sbjct: 16 HRCLACARYFIDSTNLKTHFRS 37
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 28.2 bits (62), Expect = 0.14
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 199 TGERPYQCDICNATFIYPEHFKKHR 223
TG +PY+C+IC F++ + F +H
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHV 25
Score = 25.9 bits (56), Expect = 0.77
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 9 TGARPYECKTCKKTFVSKYTYKAHLVTHTDRKR 41
TG +PYEC C K F+ + ++ H+ + T
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHVTSCTKSYE 33
Score = 24.7 bits (53), Expect = 2.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 122 TGEKPYQCEFCGAQFRFKGS 141
TG KPY+C C +F ++ S
Sbjct: 1 TGIKPYECNICAKRFMWRDS 20
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 28
Score = 27.3 bits (60), Expect = 0.19
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 42 PFSCEKCDKSFYTQQNLVQHE 62
PF C KC K ++ ++NL++HE
Sbjct: 1 PFECPKCGKCYFRKENLLEHE 21
Score = 23.1 bits (49), Expect = 6.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 98 PFICRVCGKSFVRKAEVKDHE 118
PF C CGK + RK + +HE
Sbjct: 1 PFECPKCGKCYFRKENLLEHE 21
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 27.0 bits (59), Expect = 0.22
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 99 FICRVCGKSFVRKAEVKDHERTHTGE 124
F C VC ++F R+ E++ H +HTGE
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 23.9 bits (51), Expect = 3.2
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 171 NDKRYPCTSCPKAFKRRRLLDYHIKAAHTGE 201
+++ + C+ C + F+RR L H+ +HTGE
Sbjct: 1 SEQVFTCSVCQETFRRRMELRLHM-VSHTGE 30
Score = 23.5 bits (50), Expect = 5.0
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 14 YECKTCKKTFVSKYTYKAHLVTHT 37
+ C C++TF + + H+V+HT
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHT 28
Score = 22.8 bits (48), Expect = 8.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 71 FVCTECGKAFGTLRNLEVHLAVHTG 95
F C+ C + F L +H+ HTG
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTG 29
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 26.6 bits (58), Expect = 0.37
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 15 ECKTCKKTFVSKYTYKAHLVTHTDRK 40
EC TC K F+SKY K H HT K
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 26.2 bits (57), Expect = 0.41
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 205 QCDICNATFIYPEHFKKHRRIHTGEK 230
+C C+ F+ + K H R HTGEK
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 26.2 bits (57), Expect = 0.44
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 101 CRVCGKSFVRKAEVKDHERTHTGEK 125
C C K F+ K +K H R HTGEK
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 26.2 bits (57), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 41 RPFSC--EKCDKSFYTQQNLVQHEKTHSG 67
+PF C E C+K F + +L +H TH+G
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG 29
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 26.2 bits (57), Expect = 0.54
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 97 RPFICRVCGKSFVRKAEVKDHERTHTG 123
+P+ C VCG F RK + H R+H G
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 24.6 bits (53), Expect = 2.0
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 201 ERPYQCDICNATFIYPEHFKKHRRIHTG 228
E+PY C +C F + H R H G
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 23.1 bits (49), Expect = 7.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 40 KRPFSCEKCDKSFYTQQNLVQHEKTHSGS 68
++P+SC C F + + H ++H GS
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS 29
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 36
Score = 25.4 bits (56), Expect = 1.1
Identities = 8/36 (22%), Positives = 11/36 (30%), Gaps = 13/36 (36%)
Query: 99 FICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGA 134
+C +CG H GE +C C
Sbjct: 6 HLCPICG-------------YIHKGEDFEKCPICFR 28
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 37
Score = 25.4 bits (56), Expect = 1.1
Identities = 11/36 (30%), Positives = 13/36 (36%), Gaps = 13/36 (36%)
Query: 99 FICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGA 134
+IC +CG T E P C CGA
Sbjct: 6 YICPICG-------------YTAVDEAPEYCPVCGA 28
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 25.7 bits (56), Expect = 1.1
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 99 FICRVCGKSFVRKAEVKDHERTH 121
C +CGK F ++ HE H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
Score = 25.3 bits (55), Expect = 1.6
Identities = 9/23 (39%), Positives = 9/23 (39%)
Query: 43 FSCEKCDKSFYTQQNLVQHEKTH 65
C C K F L QHE H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 24.9 bits (54), Expect = 1.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 42 PFSCEKCDKSFYTQQNLVQHEKTHSGSK 69
P+ C C+ SF T+ NL +H K+ + SK
Sbjct: 1 PYHCTYCNFSFKTKGNLTKHMKSKAHSK 28
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 26.6 bits (58), Expect = 2.0
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 13/71 (18%)
Query: 73 CTECGKAFGTLRNLEVHLAVHTGNRPFICRVCGKSFVRKAEVKDHERTHTGEKPYQCEFC 132
C CG+ G L G+ +C C K+ K V+ + + C+ C
Sbjct: 51 CILCGEQLGML-----------GSASVVCEDCKKNVCTKCGVETSN--NRPHPVWLCKIC 97
Query: 133 GAQFRFKGSSG 143
Q SG
Sbjct: 98 LEQREVWKRSG 108
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 24.5 bits (53), Expect = 2.0
Identities = 7/29 (24%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Query: 201 ERPYQCDI--CNATFIYPEHFKKHRRIHT 227
++P+ C C F +H H+ H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 24.3 bits (52), Expect = 2.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 99 FICRVCGKSFVRKAEVKDHERTHTG 123
F+C CGK+F R+ + H G
Sbjct: 5 FVCSKCGKTFTRRNTMARHADNCAG 29
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 29
Score = 24.3 bits (52), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 40 KRPFSC--EKCDKSFYTQQNLVQHEKTHS 66
+ P+ C E CDK F L +HEK H+
Sbjct: 1 QLPYECPHEGCDKRFSLPSRLKRHEKVHA 29
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 24.3 bits (53), Expect = 2.6
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 68 SKDFVCTECGKAFGTLRNLEVHLAVHTGNR 97
+ + C+ C + F + + L H+ VH +R
Sbjct: 3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 23.1 bits (50), Expect = 6.4
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 41 RPFSCEKCDKSFYTQQNLVQHEKTH 65
R ++C C + F + Q L H H
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVH 28
Score = 23.1 bits (50), Expect = 7.6
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 12 RPYECKTCKKTFVS 25
R Y C CK+ F S
Sbjct: 4 RSYTCSFCKREFRS 17
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 24.0 bits (51), Expect = 2.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 202 RPYQCDICNATFIYPEHFKKHRRIHT 227
+PY+C C+ KH RIH+
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIHS 27
Score = 22.4 bits (47), Expect = 9.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 12 RPYECKTCKKTFVSKYTYKAHLVTHTD 38
+PY+CKTC + HL H+D
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIHSD 28
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 24.2 bits (52), Expect = 2.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 201 ERPYQCDICNATFIYPEHFKKHRRIHTGE 229
ERP++C IC H R HTG+
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
Score = 23.8 bits (51), Expect = 3.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 97 RPFICRVCGKSFVRKAEVKDHERTHTGE 124
RPF C++C + +++ H R+HTG+
Sbjct: 2 RPFKCQICPYASRNSSQLTVHLRSHTGD 29
>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 31
Score = 24.2 bits (52), Expect = 2.8
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 69 KDFVCT--ECGKAFGTLRNLEVHLAVHTG 95
K ++C+ +CG A+ L+ HL+ HTG
Sbjct: 2 KRYICSFADCGAAYNKNWKLQAHLSKHTG 30
>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor,
different fingers {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 36
Score = 24.3 bits (52), Expect = 3.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 71 FVCTECGKAFGTLRNLEVHLAVHTGNR 97
F+C CG AF + LE H A + +R
Sbjct: 9 FMCLPCGIAFSSPSTLEAHQAYYCSHR 35
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 23.7 bits (51), Expect = 3.3
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 204 YQCDICNATFIYPEHFKKHRRIHTGEK 230
Y C+ C P KKH R HT +
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 22.9 bits (49), Expect = 6.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 99 FICRVCGKSFVRKAEVKDHERTHTGEK 125
+IC CG + + +K H RTHT +
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 22.9 bits (49), Expect = 7.5
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 174 RYPCTSCPKAFKRRRLLDYHIKAAHTGER 202
+Y C C K+ +L HI+ HT R
Sbjct: 1 KYICEECGIRAKKPSMLKKHIR-THTDVR 28
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 23.6 bits (51), Expect = 4.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 175 YPCTSCPKAFKRRRLLDYHIKAAHTG 200
YPC C +AF RR LL H + H+G
Sbjct: 2 YPCGLCNRAFTRRDLLIRHAQKIHSG 27
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 26
Score = 23.2 bits (49), Expect = 6.0
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 13 PYECKTCKKTFVSKYTYKAHLV 34
PY+C +C + F+ K ++H++
Sbjct: 2 PYKCSSCSQQFMQKKDLQSHMI 23
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 23.1 bits (49), Expect = 6.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 175 YPCTSCPKAFKRRRLLDYHIKAAH 198
YPC C K F R+ + H+K H
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKIIH 25
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 23.2 bits (49), Expect = 6.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 99 FICRVCGKSFVRKAEVKDHERTH 121
+ C +C +SFV K+ + H+R H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
Score = 22.8 bits (48), Expect = 7.3
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 204 YQCDICNATFIYPEHFKKHRRIH 226
Y+C +C +F+ +H+R+H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 290
Score = 25.3 bits (55), Expect = 9.0
Identities = 8/39 (20%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 101 CRVCGKSFVRKAEVKDHERTHTGEKPYQCEFCGAQFRFK 139
C CG + A + TG + C C ++ +
Sbjct: 167 CPACGSPPM--AGMIRQGGKETGLRYLSCSLCACEWHYV 203
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.326 0.137 0.445
Gapped
Lambda K H
0.267 0.0526 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,037,752
Number of extensions: 48631
Number of successful extensions: 596
Number of sequences better than 10.0: 1
Number of HSP's gapped: 557
Number of HSP's successfully gapped: 291
Length of query: 275
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 191
Effective length of database: 1,254,276
Effective search space: 239566716
Effective search space used: 239566716
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 52 (24.3 bits)