Query psy12838
Match_columns 494
No_of_seqs 335 out of 2447
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 21:04:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12838.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12838hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qfs_A CPR, P450R, NADPH--cyto 100.0 5.7E-75 2E-79 613.0 36.9 373 76-494 61-458 (458)
2 4dql_A Bifunctional P-450/NADP 100.0 1.7E-72 5.8E-77 585.7 33.7 367 77-494 6-392 (393)
3 3qe2_A CPR, P450R, NADPH--cyto 100.0 1.6E-71 5.5E-76 608.9 37.4 373 76-494 221-618 (618)
4 2qtl_A MSR;, methionine syntha 100.0 1E-71 3.4E-76 600.0 34.4 376 76-494 113-539 (539)
5 1f20_A Nitric-oxide synthase; 100.0 8.9E-69 3.1E-73 565.2 32.6 382 65-494 20-434 (435)
6 2bpo_A CPR, P450R, NADPH-cytoc 100.0 4.8E-68 1.6E-72 587.4 28.2 370 76-493 258-682 (682)
7 1ddg_A Sulfite reductase (NADP 100.0 2.3E-66 7.9E-71 536.8 30.6 349 76-493 10-374 (374)
8 1tll_A Nitric-oxide synthase, 100.0 4.2E-64 1.4E-68 556.0 30.2 372 77-494 251-655 (688)
9 1fnb_A Ferredoxin-NADP+ reduct 100.0 4.1E-34 1.4E-38 288.8 25.3 253 77-493 37-314 (314)
10 2bmw_A Ferredoxin--NADP reduct 100.0 1.2E-33 4.1E-38 283.9 25.7 253 77-493 21-304 (304)
11 3vo2_A Putative uncharacterize 100.0 5.4E-34 1.9E-38 287.5 18.1 213 239-493 66-310 (310)
12 3lo8_A Ferredoxin--NADP reduct 100.0 6E-32 2E-36 272.5 18.5 226 225-493 47-311 (311)
13 2rc5_A Ferredoxin-NADP reducta 100.0 5.1E-31 1.7E-35 266.0 24.1 198 252-493 91-314 (314)
14 2b5o_A FNR, ferredoxin--NADP r 100.0 1.3E-31 4.4E-36 279.6 18.6 212 240-493 157-402 (402)
15 3jqq_A Ferredoxin NADP reducta 100.0 8.6E-30 2.9E-34 257.6 20.0 256 76-427 14-300 (316)
16 4eh1_A Flavohemoprotein; struc 99.9 1.9E-24 6.5E-29 209.4 11.5 173 240-428 35-224 (243)
17 1tvc_A Methane monooxygenase c 99.9 8.8E-24 3E-28 205.9 15.9 174 240-427 45-232 (250)
18 2eix_A NADH-cytochrome B5 redu 99.9 1.7E-23 5.7E-28 202.9 16.2 175 240-427 43-233 (243)
19 1qfj_A Protein (flavin reducta 99.9 1.2E-23 4.1E-28 202.5 12.8 173 240-426 31-216 (232)
20 1ep3_B Dihydroorotate dehydrog 99.9 4.7E-24 1.6E-28 209.6 9.2 166 240-426 35-211 (262)
21 1umk_A B5R, NADH-cytochrome B5 99.9 3.2E-23 1.1E-27 204.7 15.0 184 240-427 48-265 (275)
22 1fdr_A Flavodoxin reductase; f 99.9 1.2E-23 3.9E-28 204.6 10.9 173 240-427 32-229 (248)
23 2r6h_A NADH:ubiquinone oxidore 99.9 4.9E-23 1.7E-27 204.8 15.6 171 252-427 84-277 (290)
24 2pia_A Phthalate dioxygenase r 99.9 7.9E-24 2.7E-28 214.2 8.5 171 240-426 40-214 (321)
25 1krh_A Benzoate 1,2-dioxygenas 99.9 2.6E-23 8.9E-28 211.7 12.3 172 240-427 140-323 (338)
26 4fk8_A Ferredoxin--NADP reduct 99.9 1.9E-24 6.6E-29 213.1 3.8 175 240-429 48-252 (271)
27 4g1v_A Flavohemoglobin; three 99.9 1.7E-22 5.9E-27 210.3 15.4 178 240-427 185-378 (399)
28 2bgi_A Ferredoxin-NADP(H) redu 99.9 3.2E-23 1.1E-27 204.8 9.2 173 240-427 45-248 (272)
29 1gvh_A Flavohemoprotein; oxido 99.9 5.9E-23 2E-27 213.5 11.5 173 240-427 184-378 (396)
30 2cnd_A NADH-dependent nitrate 99.9 3.2E-22 1.1E-26 196.9 14.5 184 240-426 44-258 (270)
31 2qdx_A Ferredoxin reductase; o 99.9 2E-23 7E-28 204.2 4.6 173 240-427 32-234 (257)
32 1cqx_A Flavohemoprotein; globi 99.9 1.3E-21 4.4E-26 203.8 14.9 177 240-427 186-384 (403)
33 2gpj_A Siderophore-interacting 99.7 9.7E-19 3.3E-23 170.9 5.3 161 240-425 40-211 (252)
34 3lrx_A Putative hydrogenase; a 99.7 7.1E-17 2.4E-21 146.6 6.9 118 298-427 1-135 (158)
35 3a1f_A Cytochrome B-245 heavy 99.6 5.5E-16 1.9E-20 143.1 5.5 122 305-428 2-170 (186)
36 3lyu_A Putative hydrogenase; t 99.6 2.4E-15 8.2E-20 134.1 6.9 112 304-427 3-130 (142)
37 2ljs_A Trypsin inhibitor 3; be 80.1 0.25 8.6E-06 30.0 -0.6 15 10-24 4-18 (30)
38 2b5o_A FNR, ferredoxin--NADP r 71.0 6.5 0.00022 39.9 6.7 47 77-123 122-169 (402)
39 3vo2_A Putative uncharacterize 60.3 15 0.0005 35.6 6.6 46 77-122 33-78 (310)
40 3s2u_A UDP-N-acetylglucosamine 40.0 23 0.00079 35.0 4.4 27 321-347 3-31 (365)
41 3lo8_A Ferredoxin--NADP reduct 35.1 65 0.0022 30.8 6.6 45 78-122 29-73 (311)
42 1mct_I Trypsin inhibitor A; co 23.0 12 0.00042 22.7 -0.7 14 11-24 4-17 (28)
43 1h9h_I EETI-II, trypsin inhibi 22.0 13 0.00045 23.7 -0.7 14 11-24 3-16 (36)
44 1lu0_A CMTI-I, trypsin inhibit 21.9 14 0.00048 22.7 -0.6 15 10-24 3-17 (29)
45 2c1x_A UDP-glucose flavonoid 3 20.2 4.6E+02 0.016 26.3 10.2 16 319-334 269-284 (456)
No 1
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=100.00 E-value=5.7e-75 Score=612.98 Aligned_cols=373 Identities=25% Similarity=0.471 Sum_probs=336.9
Q ss_pred cceEEEEeeeeeeccCCCCCeEEEEEEeCCC-CccccCCCeeEEccCCCHHHHHHHHHHhhcCCCCCCCCceEEEeecCC
Q psy12838 76 FGYVKEQREEMTVLCEPALADVRHIKLKLPA-TLQYSPGDVLLVHPHNRHSSVRKCLELLQDRDKPLTPSSRLRVVQKNQ 154 (494)
Q Consensus 76 fg~~~~v~~n~~lt~~~~~~~~~~l~l~~~~-~~~y~~Gd~l~v~P~N~~~~V~~~l~~l~~~~~~l~~~~~v~~~~~~~ 154 (494)
.+|.++|++|++||. ++.++++|++|++++ +++|+|||+|+|+|.|+++.|+++|++| ++++++.|++.....
T Consensus 61 ~p~~a~v~~n~~Lt~-~~~r~~~hie~dl~~s~l~Y~~GD~l~V~p~N~~~~V~~~l~~l-----~~~~d~~v~~~~~~~ 134 (458)
T 3qfs_A 61 NPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKIL-----GADLDVVMSLNNLDE 134 (458)
T ss_dssp SCEEEEEEEEEECCS-SSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHH-----TCCTTCEEEEEESST
T ss_pred CCEEEEEEEEEEcCC-CCCCCEEEEEEEeCCCCcccCCCCEEEEEeeCCHHHHHHHHHHh-----CcCCCceEEecCCCc
Confidence 468999999999998 578999999999987 8999999999999999999999999999 899999999976543
Q ss_pred CCCCCccCCCcccHHHHHhhcccccCCCcHHHHHHHHhcCCCHHHHHHHHhhcc--ccchhhhhhhhccCCCCEEeeecc
Q psy12838 155 YMPVPYALRKPLSVEQLATFYWDLNATPKRYAFEVLAHFTPSELEQEKLTEFTS--AEGQTDLLNYAHRPKRTVLEMLTD 232 (494)
Q Consensus 155 ~~~~p~~~~~~~tl~~ll~~~~Dl~~~p~~~~l~~la~~~~d~~~k~~L~~l~s--~~~~~~~~~~~~~~~~t~~dvl~~ 232 (494)
....+.+++.++|++++|++|+||+++|+++||+.||.||+|+.+|++|.+|++ ++|.++|.+|+.+++++++|||.+
T Consensus 135 ~~~~~~p~~~~~tl~~~l~~~~di~~~p~~~~l~~la~~a~~~~ek~~L~~l~~~~~~~~~~~~~~~~~~~~~ildvL~~ 214 (458)
T 3qfs_A 135 ESNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQD 214 (458)
T ss_dssp TCSCCCSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHHHHSCSHHHHHHHHHHTTTTTCCHHHHHHH
T ss_pred ccccCCCCCCCeeHHHHHHhcEeccCCCCHHHHHHHHHHcCCHHHHHHHHHHhccCcccHHHHHHHHhhcCCCHHHHHHh
Confidence 322333488899999999999999999999999999999999999999999987 468899999999999999999999
Q ss_pred CCCCccccChHHHHHHhCCCCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCCCC------eEEE
Q psy12838 233 FPHATRAVPVEYLFELFSPIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNPGD------SVAI 306 (494)
Q Consensus 233 fp~~~~~~~l~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~Gd------~v~i 306 (494)
||+ +++|+++|++++|+++||+|||||+|..+++.++|+|++|.|.+..++.+.|.||+||+++.+|+ .|.|
T Consensus 215 fps--~~~p~~~ll~~lp~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~~r~~~G~~S~~L~~l~~gg~~~~~~~v~v 292 (458)
T 3qfs_A 215 CPS--LRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPM 292 (458)
T ss_dssp STT--BCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCSSCSSCCCCEEEE
T ss_pred CCc--cCCCHHHHHhhCCCCcceeEeeccCcccCCCEEEEEEEEEEecCCCCCCCCCchhHHHHhhccCCccCCceEEEE
Confidence 997 57899999999999999999999999877799999999999998878888999999999887765 6999
Q ss_pred EeeCCCccCCCCCCCCEEEEecCCcchhhHHHHHHHHH---cCCCCCCceEEEEeeecCCcccccHHHHHHHHHcCCC-e
Q psy12838 307 SIKRGSFVFPKNEERPLIMVGPGTGIAPFRSYIHTRIS---NQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQL-T 382 (494)
Q Consensus 307 ~~p~G~F~lp~~~~~piImIa~GtGIAPf~s~l~~~~~---~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~~l-~ 382 (494)
.+|.|.|++|.+..+|+||||+|||||||++|++++.. ++. ..+.++||||||+...|++|++||+++.+.+.+ +
T Consensus 293 ~~p~g~F~lp~~~~~piImIggGTGIAPfrs~lq~r~~l~~~g~-~~~~~~Lf~G~R~~~~D~ly~dEl~~l~~~g~l~~ 371 (458)
T 3qfs_A 293 FVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGK-EVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQ 371 (458)
T ss_dssp EEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHTC-CCCCEEEEEEESCTTTSCTTHHHHHHHHHHTSSSE
T ss_pred EecCCCcccCCCCCCceEEEcCCcchhhHHHHHHHHHHHHhcCC-CCCCEEEEEEeCCchHhhhHHHHHHHHHHcCCCCE
Confidence 99999999998888999999999999999999999752 332 123468999999976799999999999887654 2
Q ss_pred ------------EEEecccccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHHHhhhhhchHHHHHHHHHHhhccC
Q psy12838 383 ------------FYVQHVMSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVETITLELQDEEEAKQYATVLIAGNA 450 (494)
Q Consensus 383 ------------~yVqd~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~~~~~~~~~~~~~ 450 (494)
+||||.+.++.+.+++++. .++.||||||+..|+++|+++|.++++ ++
T Consensus 372 l~~a~SRd~~~k~yVqd~l~~~~~~l~~~l~-~~~~vYvCGp~~~M~~~V~~~L~~i~~-------------------~~ 431 (458)
T 3qfs_A 372 LNVAFSREQSHKVYVQHLLKQDREHLWKLIE-GGAHIYVCGDARNMARDVQNTFYDIVA-------------------EL 431 (458)
T ss_dssp EEEEETTSSSSCCCHHHHHHHTHHHHHHHHH-TTCEEEEEEETTTHHHHHHHHHHHHHH-------------------HH
T ss_pred EEEEEECCCCCcccHhHHHHHhHHHHHHHhc-CCCEEEEECCCHHHHHHHHHHHHHHHH-------------------Hc
Confidence 7999999999999999985 589999999966899999999999999 88
Q ss_pred CCCcchhhhHHhhhhhccccCHHHHHHHHHHHHHcCCeeEeecC
Q psy12838 451 NDMPTAVREVLVKVITLELQDEEKAKQYVEQMEREGRLQTETWA 494 (494)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w~ 494 (494)
+++ ++++|++|+++|+++|||++||||
T Consensus 432 g~~-----------------~~~~A~~~~~~l~~~~RY~~Dvws 458 (458)
T 3qfs_A 432 GAM-----------------EHAQAVDYIKKLMTKGRYSLDVWS 458 (458)
T ss_dssp TTC-----------------CHHHHHHHHHHHHHTTSEEEEEEC
T ss_pred CCC-----------------CHHHHHHHHHHHHHCCCeEEEecC
Confidence 999 899999999999999999999998
No 2
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=100.00 E-value=1.7e-72 Score=585.74 Aligned_cols=367 Identities=30% Similarity=0.519 Sum_probs=323.7
Q ss_pred ceEEEEeeeeeeccCCCCCeEEEEEEeCCCCccccCCCeeEEccCCCHHHHHHHHHHhhcCCCCCCCCceEEEeecCC-C
Q psy12838 77 GYVKEQREEMTVLCEPALADVRHIKLKLPATLQYSPGDVLLVHPHNRHSSVRKCLELLQDRDKPLTPSSRLRVVQKNQ-Y 155 (494)
Q Consensus 77 g~~~~v~~n~~lt~~~~~~~~~~l~l~~~~~~~y~~Gd~l~v~P~N~~~~V~~~l~~l~~~~~~l~~~~~v~~~~~~~-~ 155 (494)
.|.++|++|++||..++.++++|++|+++++++|+|||+|+|+|.|+++.|+++|++| ++++++.|++..... .
T Consensus 6 ~~~a~v~~n~~Lt~~~~~~~~~hie~~l~~~~~Y~~GD~l~v~p~N~~~~V~~~l~~l-----~l~~~~~v~~~~~~~~~ 80 (393)
T 4dql_A 6 AFSTNVVASKELQQPGSARSTRHLEIELPKEASYQEGDHLGVIPRNYEGIVNRVTARF-----GLDASQQIRLEAEEEKL 80 (393)
T ss_dssp CEEEEEEEEEECSCTTCSCCEEEEEEECCTTCCCCTTCEEEECCCCCHHHHHHHHHHH-----TCCTTCEECCCC-----
T ss_pred cEEEEEEeEEEcCCCCCCceEEEEEEECCCCCccCCCCEEEEEccCCHHHHHHHHHHh-----CcCCCCeEEEeCCCCcc
Confidence 4788999999999999999999999999989999999999999999999999999999 899999887754221 1
Q ss_pred CCCCccCCCcccHHHHHhhcccccCCCcHHHHHHHHhcCCCHHHHHHHHhhccccchhhhhhhhccCCCCEEeeeccCCC
Q psy12838 156 MPVPYALRKPLSVEQLATFYWDLNATPKRYAFEVLAHFTPSELEQEKLTEFTSAEGQTDLLNYAHRPKRTVLEMLTDFPH 235 (494)
Q Consensus 156 ~~~p~~~~~~~tl~~ll~~~~Dl~~~p~~~~l~~la~~~~d~~~k~~L~~l~s~~~~~~~~~~~~~~~~t~~dvl~~fp~ 235 (494)
..+| ++.|+|++++|++ +||+++|+++||+.||+||+|+.+|++|++|++.+ +|.+++.+++++++|||.+||+
T Consensus 81 ~~~p--~~~~~tl~~~l~~-~di~~~~~~~~l~~la~~~~~~~~~~~L~~l~~~~---~~~~~~~~~~~~~ldvL~~fps 154 (393)
T 4dql_A 81 AHLP--LAKTVSVEELLQY-VELQDPVTRTQLRAMAAKTVCPPHKVELEALLEKQ---AYKEQVLAKRLTMLELLEKYPA 154 (393)
T ss_dssp --------CCEEHHHHTTS-BCSSSBCCHHHHHHHHHTCCSHHHHHHHHHTTSHH---HHHHHTTTTTCBHHHHHHHCTT
T ss_pred ccCC--CCCcEEHHHHHHh-ccccCCCCHHHHHHHHHhCCCHHHHHHHHHHhCch---HHHHHHhccCCCHHHHHHhCCC
Confidence 2334 6778999999999 99999999999999999999999999999999742 7889999999999999999996
Q ss_pred CccccChHHHHHHhCCCCCcccccccCCCCCCCeEEEEEEEEEeecCCCC-CccCchhhHhhcCCCCCeEE--EEeeCCC
Q psy12838 236 ATRAVPVEYLFELFSPIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLA-PRYGLCSNYLAALNPGDSVA--ISIKRGS 312 (494)
Q Consensus 236 ~~~~~~l~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~-~~~G~~S~~L~~l~~Gd~v~--i~~p~G~ 312 (494)
+++|++++++++|++++|+|||||+|..+++.++|+|+++++.+..++ .+.|.||+||+++++|+.|. |.+|.|.
T Consensus 155 --~~~p~~~~l~~lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~l~~Gd~v~v~v~~P~g~ 232 (393)
T 4dql_A 155 --CEMKFSEFIALLPSIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAELQEGDTITCFISTPQSE 232 (393)
T ss_dssp --CCCCHHHHHHTSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHHCCTTCEEEEEEECCSSC
T ss_pred --CCCCHHHHHHhCCCCcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHhCCCcCEEEEEEEcCCCC
Confidence 589999999999999999999999998777999999999998765443 35699999999999999998 5577899
Q ss_pred ccCCCCCCCCEEEEecCCcchhhHHHHHHHHH---cCCCCCCceEEEEeeecCCcccccHHHHHHHHHcCCCe-------
Q psy12838 313 FVFPKNEERPLIMVGPGTGIAPFRSYIHTRIS---NQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT------- 382 (494)
Q Consensus 313 F~lp~~~~~piImIa~GtGIAPf~s~l~~~~~---~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~~l~------- 382 (494)
|++|.+..+|+||||+|||||||++|++++.. .+. ..+.++||||||++..|++|++||+++.+.+.++
T Consensus 233 F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g~-~~~~v~L~~G~R~~~~d~ly~~el~~~~~~~~l~l~~a~Sr 311 (393)
T 4dql_A 233 FTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQ-SLGEAHLYFGCRSPHEDYLYQEELENAQSEGIITLHTAFSR 311 (393)
T ss_dssp CCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTC-CCCCEEEEEEESCTTTCCTTHHHHHHHHHTTSCEEEEEESS
T ss_pred cccCccCCCCeEEEccCceechHHHHHHHHHHHHhcCC-CCCCEEEEEEECCcchhhHHHHHHHHHHhCCCeEEEEEEeC
Confidence 99998888999999999999999999999743 332 2234689999999657999999999998766554
Q ss_pred ------EEEecccccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHHHhhhhhchHHHHHHHHHHhhccCCCCcch
Q psy12838 383 ------FYVQHVMSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVETITLELQDEEEAKQYATVLIAGNANDMPTA 456 (494)
Q Consensus 383 ------~yVqd~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (494)
.||||.++++.+.+++++.. ++.||||||++.|+++|+++|.++++ +++++
T Consensus 312 ~~~~~k~yVq~~l~~~~~~l~~~l~~-~~~vYvCGp~~~M~~~V~~~L~~i~~-------------------~~~~~--- 368 (393)
T 4dql_A 312 MPNQPKTYVQHVMEQDGKKLIELLDQ-GAHFYICGDGSQMAPAVEATLMKSYA-------------------DVHQV--- 368 (393)
T ss_dssp CTTSCCCCHHHHHHHTHHHHHHHHHT-TCEEEEEEETTTHHHHHHHHHHHHHH-------------------HHHTC---
T ss_pred CCCCCCcchhhHHHhCHHHHHHHHhC-CcEEEEECCchhhHHHHHHHHHHHHH-------------------HhcCC---
Confidence 78899998888999998864 89999999977899999999999999 88888
Q ss_pred hhhHHhhhhhccccCHHHHHHHHHHHHHcCCeeEeecC
Q psy12838 457 VREVLVKVITLELQDEEKAKQYVEQMEREGRLQTETWA 494 (494)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w~ 494 (494)
+.++|++|+++|+++|||++||||
T Consensus 369 --------------~~~~a~~~~~~l~~~~Ry~~dv~s 392 (393)
T 4dql_A 369 --------------SEADARLWLQQLEEKGRYAKDVWA 392 (393)
T ss_dssp --------------CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred --------------CHHHHHHHHHHHHHCCCEEEEecc
Confidence 899999999999999999999997
No 3
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=100.00 E-value=1.6e-71 Score=608.94 Aligned_cols=373 Identities=26% Similarity=0.479 Sum_probs=337.8
Q ss_pred cceEEEEeeeeeeccCCCCCeEEEEEEeCCC-CccccCCCeeEEccCCCHHHHHHHHHHhhcCCCCCCCCceEEEeecCC
Q psy12838 76 FGYVKEQREEMTVLCEPALADVRHIKLKLPA-TLQYSPGDVLLVHPHNRHSSVRKCLELLQDRDKPLTPSSRLRVVQKNQ 154 (494)
Q Consensus 76 fg~~~~v~~n~~lt~~~~~~~~~~l~l~~~~-~~~y~~Gd~l~v~P~N~~~~V~~~l~~l~~~~~~l~~~~~v~~~~~~~ 154 (494)
.+|.++|++|++|+. ++.++++|++|++++ +++|+|||+|+|+|.|+++.|+++|++| ++++++.|++.....
T Consensus 221 ~~~~a~v~~n~~Lt~-~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l-----~l~~d~~v~~~~~~~ 294 (618)
T 3qe2_A 221 NPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKIL-----GADLDVVMSLNNLDE 294 (618)
T ss_dssp SCEEEEEEEEEECSC-CSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHT-----TCCTTCEEEEEESCT
T ss_pred CcEEEEEEeEEEcCC-CCCCcEEEEEEEcCCCCcccccCCEEEEEcCCCHHHHHHHHHHh-----CcCCCceEEEecCCc
Confidence 358899999999996 578999999999987 7999999999999999999999999999 899999999976544
Q ss_pred CCCCCccCCCcccHHHHHhhcccccCCCcHHHHHHHHhcCCCHHHHHHHHhhc--cccchhhhhhhhccCCCCEEeeecc
Q psy12838 155 YMPVPYALRKPLSVEQLATFYWDLNATPKRYAFEVLAHFTPSELEQEKLTEFT--SAEGQTDLLNYAHRPKRTVLEMLTD 232 (494)
Q Consensus 155 ~~~~p~~~~~~~tl~~ll~~~~Dl~~~p~~~~l~~la~~~~d~~~k~~L~~l~--s~~~~~~~~~~~~~~~~t~~dvl~~ 232 (494)
....+.++|.++|++++|++|+||+++|+++||+.||.|++|+.+|++|.+|+ +++|.++|.+|+.+++++++|||.+
T Consensus 295 ~~~~~~~~p~~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~i~dvL~~ 374 (618)
T 3qe2_A 295 ESNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQD 374 (618)
T ss_dssp TCSCCSSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHHTTCSSSHHHHHHHHHTTTTTCCHHHHHHH
T ss_pred cccCCCCCCCceEHHHhhhhEeecCCCCcHHHHHHHHHHcCCHHHHHHHHHhhccChhhHHHHHHHHhhcCCCHHHHHHh
Confidence 33333448889999999999999999999999999999999999999999999 7789999999999999999999999
Q ss_pred CCCCccccChHHHHHHhCCCCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCC-CC-----eEEE
Q psy12838 233 FPHATRAVPVEYLFELFSPIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNP-GD-----SVAI 306 (494)
Q Consensus 233 fp~~~~~~~l~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~-Gd-----~v~i 306 (494)
||+ +++|+++|++++|+++||+|||||+|..+++.++|+|+++.|.+..++.+.|.||+||+++.+ |+ .|.|
T Consensus 375 fps--~~~p~~~l~~~lp~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~Gd~~~~~~v~v 452 (618)
T 3qe2_A 375 CPS--LRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPM 452 (618)
T ss_dssp STT--BCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC-----CCEEEE
T ss_pred CCc--cCCCHHHHHHhccccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhcccCCCCcceEEEE
Confidence 997 478999999999999999999999998878999999999999988788889999999999888 88 9999
Q ss_pred EeeCCCccCCCCCCCCEEEEecCCcchhhHHHHHHHHHc---CCCCCCceEEEEeeecCCcccccHHHHHHHHHcCCC-e
Q psy12838 307 SIKRGSFVFPKNEERPLIMVGPGTGIAPFRSYIHTRISN---QTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQL-T 382 (494)
Q Consensus 307 ~~p~G~F~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~---~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~~l-~ 382 (494)
.+|.|.|++|.+..+|+||||+|||||||+||++++... +. ..+.++||||||+++.|++|++||+++.+.+.+ +
T Consensus 453 ~~p~g~F~lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g~-~~~~~~L~~G~R~~~~D~ly~~el~~~~~~g~l~~ 531 (618)
T 3qe2_A 453 FVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGK-EVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQ 531 (618)
T ss_dssp EEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTC-CCCCEEEEEEESCTTTSCTTHHHHHHHHHHTSSSE
T ss_pred EEecCcccCCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcCC-CCCCEEEEEecCCCccccchHHHHHHHHhcCCCcE
Confidence 999999999988889999999999999999999998752 22 223468999999996799999999999887665 2
Q ss_pred ------------EEEecccccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHHHhhhhhchHHHHHHHHHHhhccC
Q psy12838 383 ------------FYVQHVMSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVETITLELQDEEEAKQYATVLIAGNA 450 (494)
Q Consensus 383 ------------~yVqd~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~~~~~~~~~~~~~ 450 (494)
.||||.++++.+.+++++. .++.||||||+..|+++|+++|.++++ ++
T Consensus 532 l~~a~Srd~~~k~yVqd~l~~~~~~l~~~l~-~~a~vYvCGp~~~M~~~V~~~L~~i~~-------------------~~ 591 (618)
T 3qe2_A 532 LNVAFSREQSHKVYVQHLLKQDREHLWKLIE-GGAHIYVCGDARNMARDVQNTFYDIVA-------------------EL 591 (618)
T ss_dssp EEEEETTSSSSCCCHHHHHHHTHHHHHHHHH-HTCEEEEEEETTTHHHHHHHHHHHHHH-------------------HH
T ss_pred EEEEEcCCCCCCCcHHHHHHHhHHHHHHHHh-CCcEEEEECCchHHHHHHHHHHHHHHH-------------------Hh
Confidence 7999999999999999885 489999999955899999999999999 88
Q ss_pred CCCcchhhhHHhhhhhccccCHHHHHHHHHHHHHcCCeeEeecC
Q psy12838 451 NDMPTAVREVLVKVITLELQDEEKAKQYVEQMEREGRLQTETWA 494 (494)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w~ 494 (494)
+++ ++++|++|+++|+++|||++||||
T Consensus 592 g~~-----------------~~~~a~~~~~~l~~~~RY~~Dv~s 618 (618)
T 3qe2_A 592 GAM-----------------EHAQAVDYIKKLMTKGRYSLDVWS 618 (618)
T ss_dssp TTC-----------------CHHHHHHHHHHHHHTTSEEEEEEC
T ss_pred CCC-----------------CHHHHHHHHHHHHHcCCeEEeecC
Confidence 999 899999999999999999999998
No 4
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=100.00 E-value=1e-71 Score=600.04 Aligned_cols=376 Identities=26% Similarity=0.479 Sum_probs=328.4
Q ss_pred cceEEEEeeeeeeccCCCCCeEEEEEEeCCC-CccccCCCeeEEccCCCHHHHHHHHHHhhcCCCCCC--CCceEEEeec
Q psy12838 76 FGYVKEQREEMTVLCEPALADVRHIKLKLPA-TLQYSPGDVLLVHPHNRHSSVRKCLELLQDRDKPLT--PSSRLRVVQK 152 (494)
Q Consensus 76 fg~~~~v~~n~~lt~~~~~~~~~~l~l~~~~-~~~y~~Gd~l~v~P~N~~~~V~~~l~~l~~~~~~l~--~~~~v~~~~~ 152 (494)
..|.++|++|++||..++.++++|++|++++ +++|+|||+|+|+|.|+++.|+++|++| +++ .+..|.+...
T Consensus 113 ~~~~a~v~~~~~Lt~~~~~r~v~hield~~~~~l~Y~~GD~l~V~P~N~~~~V~~~l~~l-----gl~~~~~~~v~~~~~ 187 (539)
T 2qtl_A 113 PVFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRL-----QLEDKREHCVLLKIK 187 (539)
T ss_dssp CCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECCCCHHHHHHHHHHT-----TCGGGTTSEEEEEEC
T ss_pred CCEEEEEEeeEEcCCCCCCCcEEEEEEecCCCCcCcCCCCEEEEEeCCCHHHHHHHHHHh-----CCCccCCeEEEEecc
Confidence 4578899999999999999999999999987 6899999999999999999999999999 665 4667777653
Q ss_pred CC----CCCCCccCCCcccHHHHHhhcccccCCCcHHHHHHHHhcCCCHHHHHHHHhhccccchhhhhhhhccCCCCEEe
Q psy12838 153 NQ----YMPVPYALRKPLSVEQLATFYWDLNATPKRYAFEVLAHFTPSELEQEKLTEFTSAEGQTDLLNYAHRPKRTVLE 228 (494)
Q Consensus 153 ~~----~~~~p~~~~~~~tl~~ll~~~~Dl~~~p~~~~l~~la~~~~d~~~k~~L~~l~s~~~~~~~~~~~~~~~~t~~d 228 (494)
.. ...+|.++|.++|++++|++|+||+++|++.||+.||.||+|+.+|++|.+|++++|.++|++|+.+++++++|
T Consensus 188 ~~~~~~~~~~p~~~p~~~tl~~~L~~~lDi~~~p~~~~l~~la~~a~d~~ek~~L~~l~s~~~~~~~~~~~~~~~~~lld 267 (539)
T 2qtl_A 188 ADTKKKGATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDACACLLD 267 (539)
T ss_dssp TTCCCTTCCCCTTSCTTCBHHHHHHHTBCTTSCCCHHHHHHHHTTBCSHHHHHHHHHHHSSTTHHHHHHHTTTTTCCHHH
T ss_pred ccccCCCccCCCCCCCcccHHHHHHHHhhhcCCCCHHHHHHHHHHcCCHHHHHHHHHHhChhhHHHHHHHHhhcCCCHHH
Confidence 32 23456668899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCCccccChHHHHHHhCCCCCcccccccCCCCCCCeEEEEEEEEEeec--CCCCCccCchhhHhhcC--------
Q psy12838 229 MLTDFPHATRAVPVEYLFELFSPIRPRAFSIASSPKTHSGELHLLVAIVKYKT--KMLAPRYGLCSNYLAAL-------- 298 (494)
Q Consensus 229 vl~~fp~~~~~~~l~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~--~~~~~~~G~~S~~L~~l-------- 298 (494)
||.+||+ +++|+++++.++|++++|+|||||+|..+++.++|+|+++.|.+ ..++.+.|+||+||+++
T Consensus 268 vL~~fps--~~~p~~~ll~~lp~l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~~~~~ 345 (539)
T 2qtl_A 268 LLLAFPS--CQPPLSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPN 345 (539)
T ss_dssp HHHHSTT--BCCCHHHHHHHSCBCCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTTC---
T ss_pred HHHhCCC--cCCCHHHHHHhCcCCcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhhcccc
Confidence 9999996 58999999999999999999999999755699999999998854 33455789999999876
Q ss_pred ---CCCC-------eEEEEeeCC-CccCCCCCCCCEEEEecCCcchhhHHHHHHHHHc---CC-CCCCceEEEEeeecCC
Q psy12838 299 ---NPGD-------SVAISIKRG-SFVFPKNEERPLIMVGPGTGIAPFRSYIHTRISN---QT-ASAQRLHLFFGCRNQG 363 (494)
Q Consensus 299 ---~~Gd-------~v~i~~p~G-~F~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~---~~-~~~~~i~Lf~G~R~~~ 363 (494)
++|+ .|.|.+|.| .|++|.+..+|+||||+|||||||+||++++... +. ...+.++||||||+++
T Consensus 346 ~~~~~Gd~~~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~v~LffG~R~~~ 425 (539)
T 2qtl_A 346 IHASHEDSGKALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKD 425 (539)
T ss_dssp -----------CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEESCTT
T ss_pred ccCCCCCccccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhccccCCCCCEEEEEEECCcc
Confidence 8999 999999986 9999988789999999999999999999997542 11 0123468999999996
Q ss_pred cccccHHHHHHHHHcCCC-------------------eEEEecccccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHH
Q psy12838 364 ADFYFNQEWQNAIQANQL-------------------TFYVQHVMSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVL 424 (494)
Q Consensus 364 ~d~ly~~el~~~~~~~~l-------------------~~yVqd~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L 424 (494)
.|++|++||+++.+.+.+ ++||||.+.++.+.+++++...++.||||||++.|+++|.++|
T Consensus 426 ~D~ly~dEL~~~~~~g~~~~l~~afSRd~~~~~~~g~k~yVqd~l~e~~~~l~~~l~~~~a~vYVCGp~~~M~~~V~~~L 505 (539)
T 2qtl_A 426 RDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKNMAKDVHDAL 505 (539)
T ss_dssp TCCTTHHHHHHHHHTTSSCEEEEEESSSCC------CCCSHHHHHHHTHHHHHHHHHHSCCEEEEEESCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhCCCcEEEEEEccCCCccccCCCccchhHHHHHhHHHHHHhhccCCcEEEEECCCHHHHHHHHHHH
Confidence 799999999999875532 2588888888888999988545899999999548999999999
Q ss_pred HHHHhhhhhchHHHHHHHHHHhhccCCCCcchhhhHHhhhhhccccCHHHHHHHHHHHHHcCCeeEeecC
Q psy12838 425 VETITLELQDEEEAKQYATVLIAGNANDMPTAVREVLVKVITLELQDEEKAKQYVEQMEREGRLQTETWA 494 (494)
Q Consensus 425 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w~ 494 (494)
.++++ +++++ ++++|++|+++|+++|||++||||
T Consensus 506 ~~i~~-------------------~~~~~-----------------~~~~A~~~l~~l~~~~RY~~Dvw~ 539 (539)
T 2qtl_A 506 VQIIS-------------------KEVGV-----------------EKLEAMKTLATLKEEKRYLQDIWS 539 (539)
T ss_dssp HHHHH-------------------HHHTC-----------------CHHHHHHHHHHHHHTTSEEEEEC-
T ss_pred HHHHH-------------------HhCCC-----------------CHHHHHHHHHHHHHCCcEEEEcCC
Confidence 99999 78888 899999999999999999999997
No 5
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=100.00 E-value=8.9e-69 Score=565.18 Aligned_cols=382 Identities=25% Similarity=0.436 Sum_probs=328.2
Q ss_pred hhhHHhhhccCcceEEEEeeeeeeccCCCCCeEEEEEEeCCC--CccccCCCeeEEccCCCHHHHHHHHHHhhcCCCCCC
Q psy12838 65 AQFDTFYRQADFGYVKEQREEMTVLCEPALADVRHIKLKLPA--TLQYSPGDVLLVHPHNRHSSVRKCLELLQDRDKPLT 142 (494)
Q Consensus 65 ~~~~~f~~q~dfg~~~~v~~n~~lt~~~~~~~~~~l~l~~~~--~~~y~~Gd~l~v~P~N~~~~V~~~l~~l~~~~~~l~ 142 (494)
..+..|-++ ..|.+++++|++|+..++.++++|++|++++ +++|+|||+|+|+|.|+++.|+++|++| ++..+
T Consensus 20 ~~~~~~~~~--~~~~a~v~~~~~l~~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l---~~~~~ 94 (435)
T 1f20_A 20 QGLSNVHKK--RVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERL---EDAPP 94 (435)
T ss_dssp HHHHHHHTS--CCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTB---SSCCC
T ss_pred hhccccccC--CcEEEEEEeEEECCCCCCCceEEEEEEECCCCCCCcCCCCCEEEEEecCCHHHHHHHHHHh---CCCCC
Confidence 344555555 3477899999999999999999999999975 6999999999999999999999999999 23457
Q ss_pred CCceEEEeecCC---------CCCCCccCCCcccHHHHHhhcccccCCCcHHHHHHHHhcCCCHHHHHHHHhhccccchh
Q psy12838 143 PSSRLRVVQKNQ---------YMPVPYALRKPLSVEQLATFYWDLNATPKRYAFEVLAHFTPSELEQEKLTEFTSAEGQT 213 (494)
Q Consensus 143 ~~~~v~~~~~~~---------~~~~p~~~~~~~tl~~ll~~~~Dl~~~p~~~~l~~la~~~~d~~~k~~L~~l~s~~~~~ 213 (494)
+++.|++..... .+..+.++| ++|++++|++|+||+++|+++||+.||.||+|+.+|++|.+|++ +.+
T Consensus 95 ~d~~v~~~~~~~~~~~~~~~~~~~~~~~~p-~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~--~~~ 171 (435)
T 1f20_A 95 ANHVVKVEMLEERNTALGVISNWKDESRLP-PCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSK--GLQ 171 (435)
T ss_dssp TTSCEEEEEEEEESSSTTCEEEEEECCSSC-SBCHHHHHHHTBCCSSCCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSH
T ss_pred CCeEEEEeccccccCCCCccccccccCCCC-CccHHHHHHhceecCCCCCHHHHHHHHHHCCCHHHHHHHHHhhc--CHH
Confidence 889888854211 011233467 99999999999999999999999999999999999999999995 678
Q ss_pred hhhhhhccCCCCEEeeeccCCCCccccChHHHHHHhCCCCCcccccccCCCCCCCeEEEEEEEEEeecCCC--CCccCch
Q psy12838 214 DLLNYAHRPKRTVLEMLTDFPHATRAVPVEYLFELFSPIRPRAFSIASSPKTHSGELHLLVAIVKYKTKML--APRYGLC 291 (494)
Q Consensus 214 ~~~~~~~~~~~t~~dvl~~fp~~~~~~~l~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~--~~~~G~~ 291 (494)
+|.+|+..+.++++|++.+||+ +++|+++++..+|++.+|+|||||+|..+++.++|+|+++.|.+..+ +.+.|.|
T Consensus 172 ~~~~~~~~~~~~i~~vl~~fps--~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~ 249 (435)
T 1f20_A 172 EYEEWKWGKNPTMVEVLEEFPS--IQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVC 249 (435)
T ss_dssp HHHHHHHHHCCCHHHHHHHSTT--BCBCHHHHHHHSCBCCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHH
T ss_pred HHHHHHhccCCCHHHHHHhCCc--CCCCHHHHHHhCCCCCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCcc
Confidence 8999998888999999999996 46899999999999999999999999876789999999998876432 4567999
Q ss_pred hhHhhcCCCCCeEEEEee-CCCccCCCCCCCCEEEEecCCcchhhHHHHHHHHHc----CCCCCCceEEEEeeecCCccc
Q psy12838 292 SNYLAALNPGDSVAISIK-RGSFVFPKNEERPLIMVGPGTGIAPFRSYIHTRISN----QTASAQRLHLFFGCRNQGADF 366 (494)
Q Consensus 292 S~~L~~l~~Gd~v~i~~p-~G~F~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~----~~~~~~~i~Lf~G~R~~~~d~ 366 (494)
|+||+++++|+.|.|.++ .|.|++|.+..+|+||||+|||||||+||++++... +. ....++||||||+++.|+
T Consensus 250 S~~L~~l~~Gd~v~v~~~~~g~F~lp~~~~~piilIagGtGIAP~~s~l~~~~~~~~~~~~-~~~~~~L~~G~R~~~~d~ 328 (435)
T 1f20_A 250 SSWLNRIQADDVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGM-NPCPMVLVFGCRQSKIDH 328 (435)
T ss_dssp HHHHTTCCTTCEEEEEEECCTTSSCCSCTTSCEEEECCGGGGHHHHHHHHHHHHHHHHHCC-CCCCEEEEEEESCTTTSC
T ss_pred chhHhhCCCCCEEEEEEecCCCccCCCCCCCCEEEEECCcCcHHHHHHHHHHHHhhhhccC-CCCCEEEEEeecccccch
Confidence 999999999999999996 569999987789999999999999999999999863 11 123468999999996689
Q ss_pred ccHHHHHHHHHcCCC--------------eEEEecccccC-hhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHHHhhh
Q psy12838 367 YFNQEWQNAIQANQL--------------TFYVQHVMSRH-LPLLQDLICSHQATVLIAGNANDMPTAVREVLVETITLE 431 (494)
Q Consensus 367 ly~~el~~~~~~~~l--------------~~yVqd~l~~~-~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~ 431 (494)
+|++||+++...+.+ +.|||+.+.++ .+.+++++...++.||||||+ .|+++|.++|.+++.
T Consensus 329 ly~~El~~~~~~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~l~~~~~~~l~~~~~~vYvCGp~-~M~~~V~~~L~~i~~-- 405 (435)
T 1f20_A 329 IYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDV-TMAADVLKAIQRIMT-- 405 (435)
T ss_dssp TTHHHHHHHHHTTSEEEEEEEESSCTTSCCCCHHHHHHHHSHHHHHHHHHTSCCEEEEEECH-HHHHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHcCCccEEEEEECCCCCCCCcchhhHHHhhhHHHHHHHHhcCCcEEEEeCCh-hHHHHHHHHHHHHHH--
Confidence 999999999876542 26788877766 667777774458999999994 899999999999999
Q ss_pred hhchHHHHHHHHHHhhccCCCCcchhhhHHhhhhhccccCHHHHHHHHHHHHHcCCeeEeecC
Q psy12838 432 LQDEEEAKQYATVLIAGNANDMPTAVREVLVKVITLELQDEEKAKQYVEQMEREGRLQTETWA 494 (494)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w~ 494 (494)
+++++ ++++|++|+++|+++|||++||||
T Consensus 406 -----------------~~~~~-----------------~~~~a~~~~~~l~~~~RY~~Dv~~ 434 (435)
T 1f20_A 406 -----------------QQGKL-----------------SEEDAGVFISRLRDDNRYHEDIFG 434 (435)
T ss_dssp -----------------HHTTC-----------------CHHHHHHHHHHHHHTTCEEEEECC
T ss_pred -----------------HcCCC-----------------CHHHHHHHHHHHHHCCCEEEEecC
Confidence 88899 899999999999999999999997
No 6
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=100.00 E-value=4.8e-68 Score=587.44 Aligned_cols=370 Identities=24% Similarity=0.449 Sum_probs=326.9
Q ss_pred cceEEEEeeeeeeccCCCCCeEEEEEEeCCC-CccccCCCeeEEccCCCHHHHHHHHHHhhcCCCCCCCCceEEEeecCC
Q psy12838 76 FGYVKEQREEMTVLCEPALADVRHIKLKLPA-TLQYSPGDVLLVHPHNRHSSVRKCLELLQDRDKPLTPSSRLRVVQKNQ 154 (494)
Q Consensus 76 fg~~~~v~~n~~lt~~~~~~~~~~l~l~~~~-~~~y~~Gd~l~v~P~N~~~~V~~~l~~l~~~~~~l~~~~~v~~~~~~~ 154 (494)
.+|.+.|++|++|+. ++.++++|++|++++ +++|+|||+|+|+|.|+++.|+++|++| ++++++.|++....+
T Consensus 258 ~p~~a~v~~~~~L~~-~~~~~~~hie~d~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l-----~l~~d~~v~~~~~~~ 331 (682)
T 2bpo_A 258 QPYIAPIVKSRELFS-SNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIF-----NLDPETIFDLKPLDP 331 (682)
T ss_dssp BCCCEEEEEEEECCC-CSSCCEEEEEEECTTBTCCCCTTCEEEECCCCCHHHHHHHHHHH-----TCCTTCEEECCBSST
T ss_pred CceEEEEEEEEEccC-CCCCCEEEEEEEcCCCCceecCCCEEEEEcCCCHHHHHHHHHHh-----hccCCcEEEEecCCc
Confidence 357789999999998 789999999999987 8999999999999999999999999999 999999999876544
Q ss_pred CCCCCccCCCcccHHHHHhhcccccCCCcHHHHHHHHhcCCCHHHHHHHHhhccccchhhhhhhhccCCCCEEeeeccCC
Q psy12838 155 YMPVPYALRKPLSVEQLATFYWDLNATPKRYAFEVLAHFTPSELEQEKLTEFTSAEGQTDLLNYAHRPKRTVLEMLTDFP 234 (494)
Q Consensus 155 ~~~~p~~~~~~~tl~~ll~~~~Dl~~~p~~~~l~~la~~~~d~~~k~~L~~l~s~~~~~~~~~~~~~~~~t~~dvl~~fp 234 (494)
..+.| +|.++|++++|++|+||+++|+++||+.||.|++|+.+|++|.+|+ +|.++|.+|+.+++++++|||.+||
T Consensus 332 ~~~~p--~p~~~tl~~~l~~~ldi~~~p~~~~l~~la~~a~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~i~dvL~~fp 407 (682)
T 2bpo_A 332 TVKVP--FPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAVEITSKYFNIADALKYLS 407 (682)
T ss_dssp TCCCS--SCSSEEHHHHHHHTBCCSSCCCHHHHHHHSTTCSSHHHHHHHHHHT--TCHHHHHHHTGGGTCCHHHHHHHHH
T ss_pred ccCCC--CCCCccHHHHHHHhhhccCCCCHHHHHHHHHHCCCHHHHHHHHHhc--cCHHHHHHHHhcCCCCHHHHHHhcc
Confidence 43444 8899999999999999999999999999999999999999999999 7899999999999999999999999
Q ss_pred CC--ccccChHHHHHHhCCCCCcccccccCCCCCCCeEEEEEEEEEeecCC---CCCccCchhhHhhcCCC---------
Q psy12838 235 HA--TRAVPVEYLFELFSPIRPRAFSIASSPKTHSGELHLLVAIVKYKTKM---LAPRYGLCSNYLAALNP--------- 300 (494)
Q Consensus 235 ~~--~~~~~l~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~---~~~~~G~~S~~L~~l~~--------- 300 (494)
.. ++++|+++++..+|++++|+|||||+|..+++.++|+|+++.|.+.. ++.+.|+||+||+++++
T Consensus 408 ~~~~s~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~g~~~~~~~~ 487 (682)
T 2bpo_A 408 DGAKWDTVPMQFLVESVPQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAE 487 (682)
T ss_dssp TTCCCTTSCHHHHHHHSCBCCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHHHHTTCCTTT
T ss_pred CcccccCCCHHHHHHhCcccccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhcccccccccccc
Confidence 32 45899999999999999999999999987779999999999988765 56678999999988776
Q ss_pred ---CCeEEEEeeCCC--------------ccCCCCCCCCEEEEecCCcchhhHHHHHHHHHcCC-------C-CCCceEE
Q psy12838 301 ---GDSVAISIKRGS--------------FVFPKNEERPLIMVGPGTGIAPFRSYIHTRISNQT-------A-SAQRLHL 355 (494)
Q Consensus 301 ---Gd~v~i~~p~G~--------------F~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~~~-------~-~~~~i~L 355 (494)
|+.|.|.+|.|. |++|.++.+|+||||+|||||||+||++++...+. . ..+.++|
T Consensus 488 ~~~G~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~g~~~~~~~L 567 (682)
T 2bpo_A 488 TNLPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHIL 567 (682)
T ss_dssp SCCCCCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----CCCCCCEEE
T ss_pred cccccceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhhcccccccccCCcCCEEE
Confidence 666666666554 57887778999999999999999999999986431 0 1234689
Q ss_pred EEeeecCCcccccHHHHHHHH-HcCC--------------CeEEEecccccChhHHHHhhccCCCEEEEeCCCCchHHHH
Q psy12838 356 FFGCRNQGADFYFNQEWQNAI-QANQ--------------LTFYVQHVMSRHLPLLQDLICSHQATVLIAGNANDMPTAV 420 (494)
Q Consensus 356 f~G~R~~~~d~ly~~el~~~~-~~~~--------------l~~yVqd~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V 420 (494)
|||||++ .|++|++||+++. +.+. -+.||||.+.++.+.+++++. .++.||||||++.|+++|
T Consensus 568 ~fG~R~~-~D~ly~dEl~~~~~~~g~~~~l~~afSr~d~~~k~yVqd~l~e~~~~l~~~l~-~~~~vYvCGpa~~M~~~V 645 (682)
T 2bpo_A 568 FYGSRNT-DDFLYQDEWPEYAKKLDGSFEMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMIN-NGAFIYVCGDAKGMAKGV 645 (682)
T ss_dssp EEEESSS-SSCTTTTTHHHHHHHHGGGEEEEEEESCCTTSCCCCHHHHHHHTHHHHHHHHT-TTCEEEEEECSTTHHHHH
T ss_pred EEecCCh-hhhhhHHHHHHHHHhcCCceEEEEEECCCCCCCCcchHHHHHhhHHHHHHHHh-CCcEEEEeCCchHhHHHH
Confidence 9999999 8999999999994 3221 127999999999999999885 489999999966899999
Q ss_pred HHHHHHHHhhhhhchHHHHHHHHHHhhccCCCCcchhhhHHhhhhhccccCHHHHHHHHHHHHHcCCeeEeec
Q psy12838 421 REVLVETITLELQDEEEAKQYATVLIAGNANDMPTAVREVLVKVITLELQDEEKAKQYVEQMEREGRLQTETW 493 (494)
Q Consensus 421 ~~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w 493 (494)
.++|.++++ +++++ ++++|++|+++|+++|||++|||
T Consensus 646 ~~~L~~i~~-------------------~~~~~-----------------~~~~a~~~~~~l~~~~Ry~~Dvw 682 (682)
T 2bpo_A 646 STALVGILS-------------------RGKSI-----------------TTDEATELIKMLKTSGRYQEDVW 682 (682)
T ss_dssp HHHHHHHHH-------------------HHTTC-----------------CHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHH-------------------HhCCC-----------------CHHHHHHHHHHHHHCCCEEEEeC
Confidence 999999999 88899 89999999999999999999999
No 7
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=100.00 E-value=2.3e-66 Score=536.76 Aligned_cols=349 Identities=31% Similarity=0.505 Sum_probs=312.3
Q ss_pred cceEEEEeeeeeeccCCCCCeEEEEEEeCCC-CccccCCCeeEEccCCCHHHHHHHHHHhhcCCCCCCCCceEEEeecCC
Q psy12838 76 FGYVKEQREEMTVLCEPALADVRHIKLKLPA-TLQYSPGDVLLVHPHNRHSSVRKCLELLQDRDKPLTPSSRLRVVQKNQ 154 (494)
Q Consensus 76 fg~~~~v~~n~~lt~~~~~~~~~~l~l~~~~-~~~y~~Gd~l~v~P~N~~~~V~~~l~~l~~~~~~l~~~~~v~~~~~~~ 154 (494)
.+|.+++++|++||..++.++++|++|++++ +++|+|||+|+|+|.|+++.|+++|++| ++++++.|++.
T Consensus 10 ~~~~a~v~~~~~lt~~~~~~~~~hi~~~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l-----~~~~~~~v~~~---- 80 (374)
T 1ddg_A 10 APLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELL-----WLKGDEPVTVE---- 80 (374)
T ss_dssp BCEEEEEEEEEECSCTTCSSEEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHT-----TCCSCSEEEET----
T ss_pred CCEEEEEEEEEEeCCCCCCceEEEEEEEcCCCCcccCCCCEEEEEcCCCHHHHHHHHHHh-----CCCCCceEEEC----
Confidence 3578899999999999999999999999976 7999999999999999999999999999 89999988773
Q ss_pred CCCCCccCCCcccHHHHHhhcccccCCCcHHHHHHHHhcCCCHHHHHHHHhhccccchhhhhhhhccCCCCEEeeeccCC
Q psy12838 155 YMPVPYALRKPLSVEQLATFYWDLNATPKRYAFEVLAHFTPSELEQEKLTEFTSAEGQTDLLNYAHRPKRTVLEMLTDFP 234 (494)
Q Consensus 155 ~~~~p~~~~~~~tl~~ll~~~~Dl~~~p~~~~l~~la~~~~d~~~k~~L~~l~s~~~~~~~~~~~~~~~~t~~dvl~~fp 234 (494)
+.++|++++|++|+||+ +|+++||+.||.|++|+. |.+|+ ++.++|.+|+. +++++|+|.+||
T Consensus 81 --------~~~~tl~~~l~~~~di~-~p~~~~l~~la~~~~~~~----L~~l~--~~~~~~~~~~~--~~~~~~vl~~~p 143 (374)
T 1ddg_A 81 --------GKTLPLNEALQWHFELT-VNTANIVENYATLTRSET----LLPLV--GDKAKLQHYAA--TTPIVDMVRFSP 143 (374)
T ss_dssp --------TEEEEHHHHHHHHBCCS-CCCHHHHHHHHHHHTCTT----TGGGT--TCTHHHHHHHH--HSCHHHHHHHSC
T ss_pred --------CCCccHHHHHHhcccCC-CCCHHHHHHHHHHCCCHH----HHHHh--cChHHHHHHHc--CCCHHHHHHHCC
Confidence 25899999999999999 899999999999999973 88888 46678888876 589999999999
Q ss_pred CCccccChHHHHHHhCCCCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhc-CCCCCeEEEEeeC-CC
Q psy12838 235 HATRAVPVEYLFELFSPIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAA-LNPGDSVAISIKR-GS 312 (494)
Q Consensus 235 ~~~~~~~l~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~-l~~Gd~v~i~~p~-G~ 312 (494)
+ .+++++++.+++++.+|+|||||+|..+++.++|+|+++.|.+. ++.+.|.||+||++ +++|+.|.|.+|. |.
T Consensus 144 ~---~~~~Gq~v~l~~~~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~-~~~~~G~~S~~L~~~l~~Gd~v~v~~~~~g~ 219 (374)
T 1ddg_A 144 A---QLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGEVRVFIEHNDN 219 (374)
T ss_dssp C---CCCHHHHHHHSCBCCCEEEEBCCCTTTSCSEEEEEEEECEEEET-TEEEECHHHHHHHHSCCSSCEEEEEEECCTT
T ss_pred C---CCCHHHHHhhccCCCCccceecCCCCCCCCEEEEEEEEEEeecC-CCCCCCCchHHHHhcCCCCCEEEEEEeeCCC
Confidence 6 68999999999999999999999998656999999999988775 55578999999987 9999999999965 59
Q ss_pred ccCCCCCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcCCC-e---------
Q psy12838 313 FVFPKNEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQL-T--------- 382 (494)
Q Consensus 313 F~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~~l-~--------- 382 (494)
|.+|.+..+|+||||+|||||||++|++++...+. .. .++||||||+++.|++|++||+++.+.+.+ +
T Consensus 220 F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~~~-~~-~~~L~~G~R~~~~d~ly~~El~~~~~~~~~~~l~~a~Srd~ 297 (374)
T 1ddg_A 220 FRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEA-PG-KNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQ 297 (374)
T ss_dssp SCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHTC-CS-CEEEEEEESCHHHHCTTHHHHHHHHHTTSCCEEEEEETTSS
T ss_pred ccCCCCCCCCEEEEECCccHHHHHHHHHHHHhcCC-CC-CEEEEEEeCCchhhhhHHHHHHHHHHhCCCcEEEEEEecCC
Confidence 99998778999999999999999999999987654 22 357999999975699999999999876543 1
Q ss_pred ---EEEecccccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHHHhhhhhchHHHHHHHHHHhhccCCCCcchhhh
Q psy12838 383 ---FYVQHVMSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVETITLELQDEEEAKQYATVLIAGNANDMPTAVRE 459 (494)
Q Consensus 383 ---~yVqd~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (494)
.|||+++.++.+.+++++.+ ++.|||||+++.|+++|.++|.++++ +++++
T Consensus 298 ~~k~yVq~~l~~~~~~l~~~l~~-~~~vYvCG~p~~M~~~V~~~L~~i~~-------------------~~~~~------ 351 (374)
T 1ddg_A 298 KEKVYVQDKLREQGAELWRWIND-GAHIYVCGDANRMAKDVEQALLEVIA-------------------EFGGM------ 351 (374)
T ss_dssp SSCCCHHHHHHHTHHHHHHHHHT-TCEEEEEECTTTHHHHHHHHHHHHHH-------------------HTTTC------
T ss_pred CCCccHHHHHHHhHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHHHHHHH-------------------HhCCC------
Confidence 68899998888888888864 89999999337899999999999999 88999
Q ss_pred HHhhhhhccccCHHHHHHHHHHHHHcCCeeEeec
Q psy12838 460 VLVKVITLELQDEEKAKQYVEQMEREGRLQTETW 493 (494)
Q Consensus 460 ~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w 493 (494)
++++|++|+++|+++|||++|||
T Consensus 352 -----------~~~~a~~~~~~l~~~~Ry~~dv~ 374 (374)
T 1ddg_A 352 -----------DTEAADEFLSELRVERRYQRDVY 374 (374)
T ss_dssp -----------CHHHHHHHHHHHHHTTCEEEEEC
T ss_pred -----------CHHHHHHHHHHHHHCCCeEEecC
Confidence 89999999999999999999999
No 8
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=100.00 E-value=4.2e-64 Score=556.04 Aligned_cols=372 Identities=26% Similarity=0.444 Sum_probs=323.7
Q ss_pred ceEEEEeeeeeeccCCCCCeEEEEEEeCCC--CccccCCCeeEEccCCCHHHHHHHHHHhhcCCCCCCCCceEEEeecCC
Q psy12838 77 GYVKEQREEMTVLCEPALADVRHIKLKLPA--TLQYSPGDVLLVHPHNRHSSVRKCLELLQDRDKPLTPSSRLRVVQKNQ 154 (494)
Q Consensus 77 g~~~~v~~n~~lt~~~~~~~~~~l~l~~~~--~~~y~~Gd~l~v~P~N~~~~V~~~l~~l~~~~~~l~~~~~v~~~~~~~ 154 (494)
.+.++|++|++|+..++.++++|++|++++ +++|+|||+|+|+|.|+++.|+++|++| ++..++++.|++.....
T Consensus 251 ~~~a~v~~~~~Lt~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l---~~~~~~d~~v~~~~~~~ 327 (688)
T 1tll_A 251 VSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERL---EDAPPANHVVKVEMLEE 327 (688)
T ss_dssp CEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTC---SSCCCSCSCEEEEEEEE
T ss_pred ceEEEEEeeeecCCCCCCceEEEEEEecCCCCCCccCCCCEEEEecCCCHHHHHHHHHHh---CCCCCCCeEEEEecccc
Confidence 477899999999999999999999999975 6999999999999999999999999999 33457889888864211
Q ss_pred ---------CCCCCccCCCcccHHHHHhhcccccCCCcHHHHHHHHhcCCCHHHHHHHHhhccccchhhhhhhhccCCCC
Q psy12838 155 ---------YMPVPYALRKPLSVEQLATFYWDLNATPKRYAFEVLAHFTPSELEQEKLTEFTSAEGQTDLLNYAHRPKRT 225 (494)
Q Consensus 155 ---------~~~~p~~~~~~~tl~~ll~~~~Dl~~~p~~~~l~~la~~~~d~~~k~~L~~l~s~~~~~~~~~~~~~~~~t 225 (494)
.+..+.++| ++|++++|++|+||+++|++.||+.||.|++|+.+|++|++|++ +.++|.+|+..++++
T Consensus 328 ~~~p~~~~~~~~~~~~~p-~~tl~~~l~~~lDi~~~p~~~~l~~la~~a~~~~ek~~L~~l~~--~~~~~~~~~~~~~~~ 404 (688)
T 1tll_A 328 RNTALGVISNWKDESRLP-PCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWGKNPT 404 (688)
T ss_dssp CCCSSSCCEEEEECCSSC-SBCHHHHHHHTBCCSSCCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHCCC
T ss_pred ccCCCcccccccccCCCC-CccHHHHHHhheeCCCCCCHHHHHHHHHHcCCHHHHHHHHHHhc--CHHHHHHHHhhcCCC
Confidence 011223466 99999999999999999999999999999999999999999995 678899999988999
Q ss_pred EEeeeccCCCCccccChHHHHHHhCCCCCcccccccCCCCCCCeEEEEEEEEEeecCC--CCCccCchhhHhhcCCCCCe
Q psy12838 226 VLEMLTDFPHATRAVPVEYLFELFSPIRPRAFSIASSPKTHSGELHLLVAIVKYKTKM--LAPRYGLCSNYLAALNPGDS 303 (494)
Q Consensus 226 ~~dvl~~fp~~~~~~~l~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~--~~~~~G~~S~~L~~l~~Gd~ 303 (494)
++|||.+||+ +++|+++++..+|++.+|+|||||+|..+++.++|+|+++.|.+.. ++.+.|.||+||+++++|+.
T Consensus 405 i~evl~~fps--~~~p~~~l~~~lp~l~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~~G~~S~~L~~l~~Gd~ 482 (688)
T 1tll_A 405 MVEVLEEFPS--IQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQADDV 482 (688)
T ss_dssp HHHHHHHSTT--BCCCHHHHHHHSCBCCCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEEECHHHHHHTTCCTTSE
T ss_pred HHHHHHhCCC--cCCCHHHHHHhCcccceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcCCCchhHHHHhCCCCCE
Confidence 9999999996 4789999999999999999999999987668999999999886643 34567999999999999999
Q ss_pred EEEEeeC-CCccCCCCCCCCEEEEecCCcchhhHHHHHHHHHc----CCCCCCceEEEEeeecCCcccccHHHHHHHHHc
Q psy12838 304 VAISIKR-GSFVFPKNEERPLIMVGPGTGIAPFRSYIHTRISN----QTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA 378 (494)
Q Consensus 304 v~i~~p~-G~F~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~----~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~ 378 (494)
|.|.+++ |.|++|.+..+|+||||+|||||||++|++++... +. ....++||||||+++.|++|++||+++...
T Consensus 483 v~v~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~~~~~~~~~~-~~~~v~L~~G~R~~~~D~ly~dEL~~~~~~ 561 (688)
T 1tll_A 483 VPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGM-NPCPMVLVFGCRQSKIDHIYREETLQAKNK 561 (688)
T ss_dssp EEEEEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHHHHHHHHSCC-CCCCEEEEEEESCTTTTCTTHHHHHHHHHT
T ss_pred EEEEeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHHHHHhhhhccC-CCCCEEEEEEeccchhhhhHHHHHHHHHHc
Confidence 9999964 59999987789999999999999999999998864 12 223468999999996689999999999876
Q ss_pred CCC--------------eEEEecccccC-hhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHHHhhhhhchHHHHHHHH
Q psy12838 379 NQL--------------TFYVQHVMSRH-LPLLQDLICSHQATVLIAGNANDMPTAVREVLVETITLELQDEEEAKQYAT 443 (494)
Q Consensus 379 ~~l--------------~~yVqd~l~~~-~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~~~~~~ 443 (494)
+.+ +.|||+++.++ .+.+++++...++.|||||| +.|+++|.++|.++++
T Consensus 562 ~~~~~l~~a~Sr~~~~~k~yVq~~l~~~l~~~l~~~l~~~~~~vYvCGp-~~M~~~V~~~L~~i~~-------------- 626 (688)
T 1tll_A 562 GVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGD-VTMAADVLKAIQRIMT-------------- 626 (688)
T ss_dssp TSEEEEEEEESSCTTSCCCCHHHHHHHSSHHHHHHHHHTSCCEEEEEEE-HHHHHHHHHHHHHHHH--------------
T ss_pred CCceEEEEEECCCCCCCccchhhhhHHhHHHHHHHhhccCCcEEEEeCC-HHHHHHHHHHHHHHHH--------------
Confidence 542 26888888777 67777776445899999999 4899999999999999
Q ss_pred HHhhccCCCCcchhhhHHhhhhhccccCHHHHHHHHHHHHHcCCeeEeecC
Q psy12838 444 VLIAGNANDMPTAVREVLVKVITLELQDEEKAKQYVEQMEREGRLQTETWA 494 (494)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w~ 494 (494)
+++++ +.++|++|+++|++++||+.|+|+
T Consensus 627 -----~~gg~-----------------~~~~a~~~l~~l~~~~ry~~Evf~ 655 (688)
T 1tll_A 627 -----QQGKL-----------------SEEDAGVFISRLRDDNRYHEDIFG 655 (688)
T ss_dssp -----TTTCC-----------------CTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred -----HcCCC-----------------CHHHHHHHHHhhhhcCCEEEEecC
Confidence 88889 889999999999999999999995
No 9
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=100.00 E-value=4.1e-34 Score=288.81 Aligned_cols=253 Identities=23% Similarity=0.420 Sum_probs=198.9
Q ss_pred ceEEEEeeeeeeccCCCCCeEEEEEEeCCCCccccCCCeeEEccCCCHHHHHHHHHHhhcCCCCCCCCceEEEeecCCCC
Q psy12838 77 GYVKEQREEMTVLCEPALADVRHIKLKLPATLQYSPGDVLLVHPHNRHSSVRKCLELLQDRDKPLTPSSRLRVVQKNQYM 156 (494)
Q Consensus 77 g~~~~v~~n~~lt~~~~~~~~~~l~l~~~~~~~y~~Gd~l~v~P~N~~~~V~~~l~~l~~~~~~l~~~~~v~~~~~~~~~ 156 (494)
.+.++|+++.+++..++.+++++++|+.++.+.|.||+++.|.+.|..
T Consensus 37 ~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~-------------------------------- 84 (314)
T 1fnb_A 37 PYVGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGED-------------------------------- 84 (314)
T ss_dssp CEEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBC--------------------------------
T ss_pred CEEEEEEEEEEecCCCCCCcEEEEEEecCCCCCcCCCCEEEEecCCCC--------------------------------
Confidence 466799999999988888899999999887789999999999876521
Q ss_pred CCCccCCCcccHHHHHhhcccccCCCcHHHHHHHHhcCCCHHHHHHHHhhccccchhhhhhhhccCCCCEEeeeccCCCC
Q psy12838 157 PVPYALRKPLSVEQLATFYWDLNATPKRYAFEVLAHFTPSELEQEKLTEFTSAEGQTDLLNYAHRPKRTVLEMLTDFPHA 236 (494)
Q Consensus 157 ~~p~~~~~~~tl~~ll~~~~Dl~~~p~~~~l~~la~~~~d~~~k~~L~~l~s~~~~~~~~~~~~~~~~t~~dvl~~fp~~ 236 (494)
..|
T Consensus 85 ----------------------------------------------------~~g------------------------- 87 (314)
T 1fnb_A 85 ----------------------------------------------------KNG------------------------- 87 (314)
T ss_dssp ----------------------------------------------------TTS-------------------------
T ss_pred ----------------------------------------------------cCC-------------------------
Confidence 000
Q ss_pred ccccChHHHHHHhCCCCCcccccccCCCC---CCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCCCCeEEEEeeCCCc
Q psy12838 237 TRAVPVEYLFELFSPIRPRAFSIASSPKT---HSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNPGDSVAISIKRGSF 313 (494)
Q Consensus 237 ~~~~~l~~ll~~lp~~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~Gd~v~i~~p~G~F 313 (494)
.+..+|+|||+|+|.. .++.++|+|+.+.|.+..+..+.|.+|+||+++++|+.|.|.+|.|.|
T Consensus 88 -------------~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~~y~~~~g~~~~G~~S~~L~~l~~Gd~v~v~gP~G~~ 154 (314)
T 1fnb_A 88 -------------KPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLTGPVGKE 154 (314)
T ss_dssp -------------SBCCCEEEECCSCSSCTTSSSCEEEEEEECCEEECTTSCEEECHHHHHHHHCCTTCEEEEEEEECST
T ss_pred -------------CcCCceeEecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCCchhhHhhcCCCCCEEEEEeccCCc
Confidence 0236899999999863 248999999998777655555679999999999999999999999976
Q ss_pred -cCCCCCCCCEEEEecCCcchhhHHHHHHHHHcCCC---CCCceEEEEeeecCCcccccHHHHHHHHHcC--CCeE----
Q psy12838 314 -VFPKNEERPLIMVGPGTGIAPFRSYIHTRISNQTA---SAQRLHLFFGCRNQGADFYFNQEWQNAIQAN--QLTF---- 383 (494)
Q Consensus 314 -~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~~~~---~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~--~l~~---- 383 (494)
.++.+..+|+||||+|||||||++|++++...+.. ....++||||+|+. .|++|.+||+++...+ .+++
T Consensus 155 ~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~R~~-~d~~~~~el~~l~~~~~~~~~~~~~~ 233 (314)
T 1fnb_A 155 MLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTS-SSLLYKEEFEKMKEKAPDNFRLDFAV 233 (314)
T ss_dssp TCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCBTTBCCCSEEEEEEEESSG-GGCCSHHHHHHHHHHCTTTEEEEEEE
T ss_pred eeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHhccccccCCCCEEEEEecCCH-HHhhhHHHHHHHHHhCCCcEEEEEEE
Confidence 45655578999999999999999999999875421 12346899999998 6999999999998754 3432
Q ss_pred ------------EEecccccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHHHhhhhhchHHHHHHHHHHhhccCC
Q psy12838 384 ------------YVQHVMSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVETITLELQDEEEAKQYATVLIAGNAN 451 (494)
Q Consensus 384 ------------yVqd~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~ 451 (494)
||++.+.+..+.+.+.+...++.||+||| ++|+++|+++|.+++. +.|
T Consensus 234 s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~~~-------------------~~g 293 (314)
T 1fnb_A 234 SREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYVYMCGL-KGMEKGIDDIMVSLAA-------------------AEG 293 (314)
T ss_dssp TTTCBCTTCCBCCHHHHHHTTHHHHHHHTTSTTEEEEEEEC-TTHHHHHHHHHHHHHH-------------------TTT
T ss_pred CCCCcccCCCceechHHHHHhHHHHHHHHhcCCeEEEEECC-HHHHHHHHHHHHHHHH-------------------HhC
Confidence 33333333333444444324789999999 6899999999999887 433
Q ss_pred CCcchhhhHHhhhhhccccCHHHHHHHHHHHHHcCCeeEeec
Q psy12838 452 DMPTAVREVLVKVITLELQDEEKAKQYVEQMEREGRLQTETW 493 (494)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w 493 (494)
. +|++|+++|+++|||++|||
T Consensus 294 -~--------------------~~~~~~~~l~~~~r~~~d~~ 314 (314)
T 1fnb_A 294 -I--------------------DWIEYKRQLKKAEQWNVEVY 314 (314)
T ss_dssp -C--------------------CHHHHHHHHHHTTCEEEEEC
T ss_pred -c--------------------hHHHHHHHHHHCCcEEEecC
Confidence 2 36889999999999999999
No 10
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=100.00 E-value=1.2e-33 Score=283.86 Aligned_cols=253 Identities=25% Similarity=0.453 Sum_probs=199.0
Q ss_pred ceEEEEeeeeeeccCCCCCeEEEEEEeCCC-CccccCCCeeEEccCCCHHHHHHHHHHhhcCCCCCCCCceEEEeecCCC
Q psy12838 77 GYVKEQREEMTVLCEPALADVRHIKLKLPA-TLQYSPGDVLLVHPHNRHSSVRKCLELLQDRDKPLTPSSRLRVVQKNQY 155 (494)
Q Consensus 77 g~~~~v~~n~~lt~~~~~~~~~~l~l~~~~-~~~y~~Gd~l~v~P~N~~~~V~~~l~~l~~~~~~l~~~~~v~~~~~~~~ 155 (494)
.+.++|+++.+++..++.+++++++|++++ .+.|.||+++.|.+.|.. .
T Consensus 21 ~~~~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~----------------~-------------- 70 (304)
T 2bmw_A 21 PFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVD----------------K-------------- 70 (304)
T ss_dssp CEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBC----------------T--------------
T ss_pred CEEEEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCc----------------c--------------
Confidence 467899999999998899999999999876 689999999999876631 0
Q ss_pred CCCCccCCCcccHHHHHhhcccccCCCcHHHHHHHHhcCCCHHHHHHHHhhccccchhhhhhhhccCCCCEEeeeccCCC
Q psy12838 156 MPVPYALRKPLSVEQLATFYWDLNATPKRYAFEVLAHFTPSELEQEKLTEFTSAEGQTDLLNYAHRPKRTVLEMLTDFPH 235 (494)
Q Consensus 156 ~~~p~~~~~~~tl~~ll~~~~Dl~~~p~~~~l~~la~~~~d~~~k~~L~~l~s~~~~~~~~~~~~~~~~t~~dvl~~fp~ 235 (494)
.|
T Consensus 71 ------------------------------------------------------~g------------------------ 72 (304)
T 2bmw_A 71 ------------------------------------------------------NG------------------------ 72 (304)
T ss_dssp ------------------------------------------------------TS------------------------
T ss_pred ------------------------------------------------------cC------------------------
Confidence 00
Q ss_pred CccccChHHHHHHhCCCCCcccccccCCCC---CCCeEEEEEEEEEeecCC-CCCccCchhhHhhcCCCCCeEEEEeeCC
Q psy12838 236 ATRAVPVEYLFELFSPIRPRAFSIASSPKT---HSGELHLLVAIVKYKTKM-LAPRYGLCSNYLAALNPGDSVAISIKRG 311 (494)
Q Consensus 236 ~~~~~~l~~ll~~lp~~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~-~~~~~G~~S~~L~~l~~Gd~v~i~~p~G 311 (494)
.+..+|+|||+|+|.. +++.++|+|+.+.|.++. +..+.|.+|+||+++++|+.|.|.+|.|
T Consensus 73 --------------~~~~~R~ySias~~~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~Gd~v~v~gP~G 138 (304)
T 2bmw_A 73 --------------KPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKITGPVG 138 (304)
T ss_dssp --------------CBCCCEEEEBCSCTTTTTTSSSEEEEEEECCEECSSSSSSCEECHHHHHHHTCCTTCEEEEEEEEC
T ss_pred --------------CCCCCcceecCCCCcccCCCCCEEEEEEEEEEeeccccCcCCCcchhhHHhcCCCCCEEEEEeccC
Confidence 0136799999999863 248999999997775432 2235799999999999999999999999
Q ss_pred Cc-cCCCCCCCCEEEEecCCcchhhHHHHHHHHHcC-----CC--CCCceEEEEeeecCCcccccHHHHHHHHHcC--CC
Q psy12838 312 SF-VFPKNEERPLIMVGPGTGIAPFRSYIHTRISNQ-----TA--SAQRLHLFFGCRNQGADFYFNQEWQNAIQAN--QL 381 (494)
Q Consensus 312 ~F-~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~~-----~~--~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~--~l 381 (494)
.| .++.+..+|+||||+|||||||++|++++...+ .. ....++||||+|+. .|++|.+||+++.... .+
T Consensus 139 ~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~~~~~v~l~~g~r~~-~d~~~~~el~~~~~~~~~~~ 217 (304)
T 2bmw_A 139 KEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQKYPDNF 217 (304)
T ss_dssp SSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHHCHHHHHHCTTCCCCSCEEEEEEESSG-GGCTTHHHHHHHHHHCTTTE
T ss_pred CceeCCCCCCCCEEEEecCccHHHHHHHHHHHHHhhhhhcccccccCCCEEEEEEeCCh-HhcchHHHHHHHHHhCCCcE
Confidence 75 466555789999999999999999999987532 00 11346899999998 6999999999997643 33
Q ss_pred e----------------EEEecccccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHHHhhhhhchHHHHHHHHHH
Q psy12838 382 T----------------FYVQHVMSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVETITLELQDEEEAKQYATVL 445 (494)
Q Consensus 382 ~----------------~yVqd~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~~~~~~~~ 445 (494)
+ .|||+.+.++.+.+++++...++.||+||| ++|+++|+++|.+++.
T Consensus 218 ~~~~~~s~~~~~~~~~~~~v~~~l~~~~~~l~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~~~---------------- 280 (304)
T 2bmw_A 218 RLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICGP-PPMEEGIDAALSAAAA---------------- 280 (304)
T ss_dssp EEEEEETTTCBCTTSSBCCHHHHHHHTHHHHHHHHTSTTEEEEEEEC-TTHHHHHHHHHHHHHH----------------
T ss_pred EEEEEEcCCCCCCCCCcceehHHHHHhHHHHHHHhhcCCcEEEEECC-HHHHHHHHHHHHHHHH----------------
Confidence 3 244555555555666655555789999999 6899999999999987
Q ss_pred hhccCCCCcchhhhHHhhhhhccccCHHHHHHHHHHHHHcCCeeEeec
Q psy12838 446 IAGNANDMPTAVREVLVKVITLELQDEEKAKQYVEQMEREGRLQTETW 493 (494)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w 493 (494)
+.| + + ++.++++|+++|||++|||
T Consensus 281 ---~~g-~-----------------~---~~~~~~~m~~~~ry~~e~~ 304 (304)
T 2bmw_A 281 ---KEG-V-----------------T---WSDYQKDLKKAGRWHVETY 304 (304)
T ss_dssp ---TTT-C-----------------C---HHHHHHHHHHTTCEEEEEC
T ss_pred ---HcC-c-----------------c---HHHHHHHHHHcCCeEEecC
Confidence 433 3 2 5789999999999999999
No 11
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=100.00 E-value=5.4e-34 Score=287.53 Aligned_cols=213 Identities=23% Similarity=0.389 Sum_probs=172.4
Q ss_pred ccChHHHHHHhCC-------CCCcccccccCCCC---CCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCCCCeEEEEe
Q psy12838 239 AVPVEYLFELFSP-------IRPRAFSIASSPKT---HSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNPGDSVAISI 308 (494)
Q Consensus 239 ~~~l~~ll~~lp~-------~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~Gd~v~i~~ 308 (494)
..|+|++...+|. +.+|+|||+|+|.. +++.++|+|++++|.+..++.+.|.+|+||+++++|+.|.|.+
T Consensus 66 ~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~v~g 145 (310)
T 3vo2_A 66 YREGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGADVKITG 145 (310)
T ss_dssp CCTTCEEEEECSSBCTTSCBCCCEEEECCSCTTTTTTSSSEEEEEEECCEEECTTSCEEECHHHHHHHTCCTTCEEEEEE
T ss_pred ccCCCEEEEECCCcCCCCCcCcceeeecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCcchhhHHhcCCCCCEEEEEe
Confidence 3466665555553 25899999999963 3589999999998887666667899999999999999999999
Q ss_pred eCCCcc-CCCCCCCCEEEEecCCcchhhHHHHHHHHHcCCCC---CCceEEEEeeecCCcccccHHHHHHHHHcC--CCe
Q psy12838 309 KRGSFV-FPKNEERPLIMVGPGTGIAPFRSYIHTRISNQTAS---AQRLHLFFGCRNQGADFYFNQEWQNAIQAN--QLT 382 (494)
Q Consensus 309 p~G~F~-lp~~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~---~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~--~l~ 382 (494)
|.|.|. +|.+..+|+||||+|||||||++|++++...+... ...++||||+|+. .|++|.+||+++.+.. .++
T Consensus 146 P~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~-~d~~~~~el~~l~~~~~~~~~ 224 (310)
T 3vo2_A 146 PVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTS-DSLLYKEELEKMKEMAPDNFR 224 (310)
T ss_dssp EECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSSCCTTCCCCSEEEEEEEESSG-GGCCSHHHHHHHHHHCTTTEE
T ss_pred ccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHhhcccccCCCcEEEEEEecCh-hhcccHHHHHHHHHhCCCCEE
Confidence 999755 56556789999999999999999999998654311 2356899999998 5999999999998764 333
Q ss_pred ----------------EEEecccccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHHHhhhhhchHHHHHHHHHHh
Q psy12838 383 ----------------FYVQHVMSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVETITLELQDEEEAKQYATVLI 446 (494)
Q Consensus 383 ----------------~yVqd~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~~~~~~~~~ 446 (494)
.|||+.+.+..+.+++++...++.||+||| ++|+++|+++|.+++.
T Consensus 225 v~~~~sr~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGp-~~M~~~v~~~L~~~~~----------------- 286 (310)
T 3vo2_A 225 LDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYVYMCGL-KGMEKGIDDIMLNLAA----------------- 286 (310)
T ss_dssp EEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHHTSTTEEEEEEES-TTHHHHHHHHHHHHHH-----------------
T ss_pred EEEEECCCCCCCCCcceehHHHHHHHHHHHHHhcccCCcEEEEeCC-HHHHHHHHHHHHHHHH-----------------
Confidence 355666666666677777655899999999 6899999999999987
Q ss_pred hccCCCCcchhhhHHhhhhhccccCHHHHHHHHHHHHHcCCeeEeec
Q psy12838 447 AGNANDMPTAVREVLVKVITLELQDEEKAKQYVEQMEREGRLQTETW 493 (494)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w 493 (494)
+.+ + +++.|+++|+++|||++|||
T Consensus 287 --~~g-~--------------------~~~~~~~~l~~~~r~~~e~y 310 (310)
T 3vo2_A 287 --KDG-I--------------------DWMQYKKQLKKGEQWNVEVY 310 (310)
T ss_dssp --HTT-C--------------------CHHHHHHHHHHTTSEEEEEC
T ss_pred --HcC-c--------------------CHHHHHHHHHHCCceEEecC
Confidence 432 2 47889999999999999999
No 12
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=99.98 E-value=6e-32 Score=272.47 Aligned_cols=226 Identities=20% Similarity=0.327 Sum_probs=169.3
Q ss_pred CEEeeeccCCCCccccChHHHHHHhCC---------CCCcccccccCCCC---CCCeEEEEEEEEEeecCCC----CCcc
Q psy12838 225 TVLEMLTDFPHATRAVPVEYLFELFSP---------IRPRAFSIASSPKT---HSGELHLLVAIVKYKTKML----APRY 288 (494)
Q Consensus 225 t~~dvl~~fp~~~~~~~l~~ll~~lp~---------~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~~----~~~~ 288 (494)
++..+....|......|+|++...+|. ..+|+|||+|+|.. +++.++|+|+++.|..... ....
T Consensus 47 ~v~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~~~~~ 126 (311)
T 3lo8_A 47 ETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKN 126 (311)
T ss_dssp CEEEEEEECTTSSCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEEEECCCCCCTTTCCCCGGGS
T ss_pred ccEEEEEeCCCCCcccCCCEEEEeCCCCccccCCCCCCceeeEecCCCcccCCCCCEEEEEEEEEEecccccCcCCcCCC
Confidence 344444444432223567766555654 36899999999964 2589999999874432211 1256
Q ss_pred CchhhHhhcCCCCCeEEEEeeCCCccCCC--CCCCCEEEEecCCcchhhHHHHHHHHHcCCC---CCCceEEEEeeecCC
Q psy12838 289 GLCSNYLAALNPGDSVAISIKRGSFVFPK--NEERPLIMVGPGTGIAPFRSYIHTRISNQTA---SAQRLHLFFGCRNQG 363 (494)
Q Consensus 289 G~~S~~L~~l~~Gd~v~i~~p~G~F~lp~--~~~~piImIa~GtGIAPf~s~l~~~~~~~~~---~~~~i~Lf~G~R~~~ 363 (494)
|.+|+||+++++|+.|.|.+|.|.|.+.. +..+|+||||+|||||||++|++++..++.. ....++||||+|+.
T Consensus 127 G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~l~~g~r~~- 205 (311)
T 3lo8_A 127 GVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANS- 205 (311)
T ss_dssp CHHHHHHHTCCTTCEEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTEECTTCCCCSEEEEEEEESSG-
T ss_pred CchhhHHhcCCCcCEEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHHHHHHHHhccccccCCCCEEEEEecCCh-
Confidence 99999999999999999999999876543 3578999999999999999999999875431 12346899999998
Q ss_pred cccccHHHHHHHHHcC--CCe----------------EEEecccccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHH
Q psy12838 364 ADFYFNQEWQNAIQAN--QLT----------------FYVQHVMSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLV 425 (494)
Q Consensus 364 ~d~ly~~el~~~~~~~--~l~----------------~yVqd~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~ 425 (494)
.|++|.++|+++.... .++ .||++.+.+..+.+.+++. .++.||+||| +.|+++|+++|.
T Consensus 206 ~d~~~~~el~~l~~~~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~-~~~~vyvCGp-~~m~~~v~~~L~ 283 (311)
T 3lo8_A 206 DSLLYDEEFTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIFKLLD-GGAHIYFCGL-KGMMPGIQDTLK 283 (311)
T ss_dssp GGCSSHHHHHHHHHHCTTTEEEEEEETTTC-------CCHHHHHHHTHHHHHHHHH-TTCEEEEEEC-GGGHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHhCCCcEEEEEEECCCCcccCCCcceehHHHHHHHHHHHHhhc-CCcEEEEECC-HHHHHHHHHHHH
Confidence 6999999999998764 333 2344444444444555543 4799999999 689999999999
Q ss_pred HHHhhhhhchHHHHHHHHHHhhccCCCCcchhhhHHhhhhhccccCHHHHHHHHHHHHHcCCeeEeec
Q psy12838 426 ETITLELQDEEEAKQYATVLIAGNANDMPTAVREVLVKVITLELQDEEKAKQYVEQMEREGRLQTETW 493 (494)
Q Consensus 426 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w 493 (494)
+++. +.+ +.|++|+++|+++|||++|||
T Consensus 284 ~~~~-------------------~~g---------------------~~~~~~~~~l~~~~ry~~e~y 311 (311)
T 3lo8_A 284 KVAE-------------------RRG---------------------ESWDQKLAQLKKNKQWHVEVY 311 (311)
T ss_dssp HHHH-------------------HTT---------------------CCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHH-------------------hcc---------------------HHHHHHHHHHHHCCcEEEecC
Confidence 9987 433 247789999999999999999
No 13
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=99.98 E-value=5.1e-31 Score=266.02 Aligned_cols=198 Identities=19% Similarity=0.350 Sum_probs=150.3
Q ss_pred CCCcccccccCCCC---CCCeEEEEEEEEEeecCCCCC-ccCchhhHhhcCCCCCeEEEEeeCCCcc-CCC-CCCCCEEE
Q psy12838 252 IRPRAFSIASSPKT---HSGELHLLVAIVKYKTKMLAP-RYGLCSNYLAALNPGDSVAISIKRGSFV-FPK-NEERPLIM 325 (494)
Q Consensus 252 ~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~~~~-~~G~~S~~L~~l~~Gd~v~i~~p~G~F~-lp~-~~~~piIm 325 (494)
+.+|+|||+|+|.. +++.++|+|++++|.+..+.. +.|.+|+||+++++|+.|.|.+|.|.|. ++. +..+|+||
T Consensus 91 ~~~R~ySi~s~p~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~~~~~~~~~vl 170 (314)
T 2rc5_A 91 YTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCDLKPGDEVTMTGPSGKKFLLPNTDFSGDIMF 170 (314)
T ss_dssp CCCEEEECCSCTTCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHTCCTTCEEEEEEEECSSSCCCSSCBCSCEEE
T ss_pred CCceeeeccCCccccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhcCCCcCEEEEEeccCCceeCCCCCCCCCEEE
Confidence 57899999999862 348999999998765543332 4699999999999999999999999765 454 45789999
Q ss_pred EecCCcchhhHHHHHHHHHcCCC-CCCceEEEEeeecCCcccccHHHHHHHHHc-CCCe-----------------EEEe
Q psy12838 326 VGPGTGIAPFRSYIHTRISNQTA-SAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLT-----------------FYVQ 386 (494)
Q Consensus 326 Ia~GtGIAPf~s~l~~~~~~~~~-~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~-~~l~-----------------~yVq 386 (494)
||+|||||||++|++++...+.. ....++||||+|+. .|++|.++|+++... ..++ .||+
T Consensus 171 IagGtGIaP~~s~l~~l~~~~~~~~~~~v~l~~g~r~~-~d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~g~~~~v~ 249 (314)
T 2rc5_A 171 LATGTGIAPFIGMSEELLEHKLIKFTGNITLVYGAPYS-DELVMMDYLKGLESKHKNFKLITAISREEKNSFDGGRMYIS 249 (314)
T ss_dssp EEEGGGGHHHHHHHHHHHTTCSSCBCSCEEEEEEESSG-GGSCSHHHHHHHHHHHSSEEEEEEETTTCBCTTTSSBCCHH
T ss_pred EECCccHHHHHHHHHHHHHhcccCCCCcEEEEEEeCCH-HHHhHHHHHHHHHHhCCcEEEEEEECCCCCcccCCCceehh
Confidence 99999999999999999865320 12346899999999 589999999998764 3333 2334
Q ss_pred cccccChhHHHHhhccCCCEEEEe-CCCCchHHHHHHHHHHHHhhhhhchHHHHHHHHHHhhccCCCCcchhhhHHhhhh
Q psy12838 387 HVMSRHLPLLQDLICSHQATVLIA-GNANDMPTAVREVLVETITLELQDEEEAKQYATVLIAGNANDMPTAVREVLVKVI 465 (494)
Q Consensus 387 d~l~~~~~~l~~~l~~~~~~vYvC-Gp~~~M~~~V~~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (494)
+.+.+..+.+.+.+...+ .+|+| || ++|+++|+++|.++.. . +
T Consensus 250 ~~l~~~~~~l~~~~~~~~-~~yvCGGp-~~m~~~v~~~L~~~g~-------------------~--~------------- 293 (314)
T 2rc5_A 250 HRVREQAEAVKKILNGGG-RFYICGGP-KGMEKGVIEEIQKISG-------------------N--T------------- 293 (314)
T ss_dssp HHHHHTHHHHHHHHHHTC-EEEEEESS-TTTHHHHHHHHHHHHT-------------------C--C-------------
T ss_pred HHHHHhHHHHHHHhhcCC-eEEEeCCc-HHHHHHHHHHHHHHHh-------------------c--c-------------
Confidence 444333344544453324 45999 98 6899999999988653 1 1
Q ss_pred hccccCHHHHHHHHHHHHHcCCeeEeec
Q psy12838 466 TLELQDEEKAKQYVEQMEREGRLQTETW 493 (494)
Q Consensus 466 ~~~~~~~~~a~~~~~~~~~~~r~~~d~w 493 (494)
..++.|+.+|+++|||++|||
T Consensus 294 -------i~~e~f~~~l~~~gr~~~e~~ 314 (314)
T 2rc5_A 294 -------GTYEEFKHHLEGAHQLFVETY 314 (314)
T ss_dssp -------SCHHHHHHHHHHTTCEEEEEC
T ss_pred -------chHHHHHHHHHHCCCEEEecC
Confidence 235789999999999999999
No 14
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=99.97 E-value=1.3e-31 Score=279.61 Aligned_cols=212 Identities=24% Similarity=0.406 Sum_probs=165.3
Q ss_pred cChHHHHHHhCC-------CCCcccccccCCCC---CCCeEEEEEEEEEeecCC-CCCccCchhhHhhcCCCC-CeEEEE
Q psy12838 240 VPVEYLFELFSP-------IRPRAFSIASSPKT---HSGELHLLVAIVKYKTKM-LAPRYGLCSNYLAALNPG-DSVAIS 307 (494)
Q Consensus 240 ~~l~~ll~~lp~-------~~pR~YSIaSsp~~---~~~~i~l~V~~v~~~~~~-~~~~~G~~S~~L~~l~~G-d~v~i~ 307 (494)
.|+|++...+|. ..+|+|||+|+|.. +++.++|+|+++.|.+.. +....|.+|+||+++++| |.|.|.
T Consensus 157 ~pGQ~v~l~~~~~~~~g~~~~~R~ySIas~p~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~G~d~v~v~ 236 (402)
T 2b5o_A 157 LEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTDDVKIT 236 (402)
T ss_dssp CTTCEEEEECSSEETTTEECCCEEEEBCSCTTTTTTSSCEEEEEEECCEEECTTTCCEEECHHHHHHHTCCTTCCCEEEE
T ss_pred CCCCEEEEEecCCCcCCCccCceeeeccCCCccccCCCCEEEEEEEEeeecccccCcCCCCchhHHHhhCCCCCceEEEE
Confidence 466665444442 47899999999864 248999999998776522 223579999999999999 999999
Q ss_pred eeCCCc-cCCCCCCCCEEEEecCCcchhhHHHHHHHHHcCCC---CCCceEEEEeeecCCcccccHHHHHHHHHcC--CC
Q psy12838 308 IKRGSF-VFPKNEERPLIMVGPGTGIAPFRSYIHTRISNQTA---SAQRLHLFFGCRNQGADFYFNQEWQNAIQAN--QL 381 (494)
Q Consensus 308 ~p~G~F-~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~~~~---~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~--~l 381 (494)
+|.|.| .++.+..+|+||||+|||||||++|++++...+.. ....++||||+|+. .|++|.+||+++...+ .+
T Consensus 237 gP~G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~~~~~~~~~~~~~v~L~~g~R~~-~d~~~~~eL~~l~~~~~~~~ 315 (402)
T 2b5o_A 237 GPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYT-ANILYKDDFEKMAAENPDNF 315 (402)
T ss_dssp EEECSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCCSSCCCCSEEEEEEEESSG-GGCTTHHHHHHHHHHCTTTE
T ss_pred cccCCcccCCccCCCCEEEEEcccCHHHHHHHHHHHHHhccccccccCCEEEEEecCCH-HHhHHHHHHHHHHHhCCCcE
Confidence 999976 56655678999999999999999999999875421 12356899999998 6999999999998753 33
Q ss_pred e----------------EEEecccccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHHHhhhhhchHHHHHHHHHH
Q psy12838 382 T----------------FYVQHVMSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVETITLELQDEEEAKQYATVL 445 (494)
Q Consensus 382 ~----------------~yVqd~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~~~~~~~~ 445 (494)
+ .||++.+.+..+.+++++...++.||+||| ++|+++|+++|.+++.
T Consensus 316 ~v~~~~S~~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGP-~~M~~~v~~~L~~~g~---------------- 378 (402)
T 2b5o_A 316 RLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGL-KGMQPPIDETFTAEAE---------------- 378 (402)
T ss_dssp EEEEEETTTCBCTTSCBCCHHHHHHHTHHHHHHHHTSTTEEEEEEEC-GGGHHHHHHHHHHHHH----------------
T ss_pred EEEEEECCCCcccCCCccchHHHHHHhHHHHHHHhccCCcEEEEECC-HHHHHHHHHHHHHHHH----------------
Confidence 3 244444544445556656444789999999 6899999999999887
Q ss_pred hhccCCCCcchhhhHHhhhhhccccCHHHHHHHHHHHHHcCCeeEeec
Q psy12838 446 IAGNANDMPTAVREVLVKVITLELQDEEKAKQYVEQMEREGRLQTETW 493 (494)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~~~d~w 493 (494)
+.+. .+..++++|+++|||++|||
T Consensus 379 ---~~g~---------------------~~~~~~~~m~~~~Ry~~e~~ 402 (402)
T 2b5o_A 379 ---KRGL---------------------NWEEMRRSMKKEHRWHVEVY 402 (402)
T ss_dssp ---HTTC---------------------CHHHHHHHHHHTTCEEEEEC
T ss_pred ---HcCc---------------------hHHHHHHHHHHCCCEEEecC
Confidence 4331 36789999999999999999
No 15
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=99.97 E-value=8.6e-30 Score=257.60 Aligned_cols=256 Identities=18% Similarity=0.330 Sum_probs=181.0
Q ss_pred cceEEEEeeeeeeccCCCCCeEEEEEEeCCCCccccCCCeeEEccCCCHHHHHHHHHHhhcCCCCCCCCceEEEeecCCC
Q psy12838 76 FGYVKEQREEMTVLCEPALADVRHIKLKLPATLQYSPGDVLLVHPHNRHSSVRKCLELLQDRDKPLTPSSRLRVVQKNQY 155 (494)
Q Consensus 76 fg~~~~v~~n~~lt~~~~~~~~~~l~l~~~~~~~y~~Gd~l~v~P~N~~~~V~~~l~~l~~~~~~l~~~~~v~~~~~~~~ 155 (494)
.++.++|+++.+++.++...++.||+|+.++.+.|.+|..++|.|+..+.. ... + ..
T Consensus 14 ~p~~~~v~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~GQ~~~i~~~~~~~~-----~~~---------~---------~~ 70 (316)
T 3jqq_A 14 NPLKCKIVDKINLVRPNSPNEVYHLEINHNGLFKYLEGHTCGIIPYYNELD-----NNP---------N---------NQ 70 (316)
T ss_dssp SCEEEEEEEEEECSCTTCSCCEEEEEEECTTCCCCCTTCEEEECTTCC--------------------------------
T ss_pred CCEEEEEEeeEEccCCCCCCceEEEEEeCCCCcceecCcEeEEECCCcccc-----ccc---------c---------cc
Confidence 468899999999999888899999999998789999999999999876422 001 0 00
Q ss_pred CCCCccCCCcccHHHHHhhcccccCCCcHHHHHHHHhcCCCHHHHHHHHhhccccchhhhhhhhccCCCCEEeeeccCCC
Q psy12838 156 MPVPYALRKPLSVEQLATFYWDLNATPKRYAFEVLAHFTPSELEQEKLTEFTSAEGQTDLLNYAHRPKRTVLEMLTDFPH 235 (494)
Q Consensus 156 ~~~p~~~~~~~tl~~ll~~~~Dl~~~p~~~~l~~la~~~~d~~~k~~L~~l~s~~~~~~~~~~~~~~~~t~~dvl~~fp~ 235 (494)
.+.|..+ +.+ +.+.+-. .+.
T Consensus 71 ~~~~~~~---~~~----~~~~~h~-------------------------------------~~~---------------- 90 (316)
T 3jqq_A 71 INKDHNI---INT----TNHTNHN-------------------------------------NIA---------------- 90 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccc---ccc----ccccccc-------------------------------------ccc----------------
Confidence 0000000 000 0000000 000
Q ss_pred CccccChHHHHHHhCCCCCcccccccCCCCCCCeEEEEEEEEEeecC---CCCCccCchhhHhhcCCCCCeEEEEeeCCC
Q psy12838 236 ATRAVPVEYLFELFSPIRPRAFSIASSPKTHSGELHLLVAIVKYKTK---MLAPRYGLCSNYLAALNPGDSVAISIKRGS 312 (494)
Q Consensus 236 ~~~~~~l~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~---~~~~~~G~~S~~L~~l~~Gd~v~i~~p~G~ 312 (494)
....-+...+|+|||+|+|.. +.++|+|+++.|.+. .++.+.|.+|+||+++++|+.|.|.+|.|.
T Consensus 91 ---------~~~~~g~~~~R~ySIaS~p~~--~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~v~gP~G~ 159 (316)
T 3jqq_A 91 ---------LSHIKKQRCARLYSISSSNNM--ENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKINDDIYLTGAHGY 159 (316)
T ss_dssp ---------------CCCCEEEEBCSCTTS--SSEEEEEECCBC---------CCBCHHHHHHHTCCTTCEEEEEEEECC
T ss_pred ---------cccCCCcccceeeecccCCCC--CeEEEEEEEEEecccccccCcCCCCchhHHHhhCCCCCEEEEEecCCc
Confidence 000113568999999999975 789999999876542 123467999999999999999999999999
Q ss_pred ccCCCC---CCCCEEEEecCCcchhhHHHHHHHHHcCCC--------CCCceEEEEeeecCCcccccHHHHHHHHHcC--
Q psy12838 313 FVFPKN---EERPLIMVGPGTGIAPFRSYIHTRISNQTA--------SAQRLHLFFGCRNQGADFYFNQEWQNAIQAN-- 379 (494)
Q Consensus 313 F~lp~~---~~~piImIa~GtGIAPf~s~l~~~~~~~~~--------~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~-- 379 (494)
|.++.+ ..+|+||||+|||||||+||++++...+.. ....++||||+|+. .|++|.++|+++....
T Consensus 160 f~l~~~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~-~d~~~~~eL~~l~~~~~~ 238 (316)
T 3jqq_A 160 FNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNE-DSILYLNELEYFQKMYPN 238 (316)
T ss_dssp CCCCTTHHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSG-GGCTTHHHHHHHHHHCTT
T ss_pred eEcCCcccCCCCcEEEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCH-HHhhcHHHHHHHHHhCCC
Confidence 999876 378999999999999999999999875420 12346899999999 5899999999998752
Q ss_pred CCe---------------EEEecccccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHH
Q psy12838 380 QLT---------------FYVQHVMSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVET 427 (494)
Q Consensus 380 ~l~---------------~yVqd~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i 427 (494)
.++ .||++.+.+..+.+++++...++.||+||| +.|+++++++|.+.
T Consensus 239 ~~~~~~~~s~~~~~~g~~g~V~~~l~~~~~~~~~~l~~~~~~vyvCGP-~~m~~~v~~~l~~~ 300 (316)
T 3jqq_A 239 NINIHYVFSYKQNSDATSFYVQDEIYKRKTEFLNLFNNYKCELYICGK-KSIRYKVMDILKSH 300 (316)
T ss_dssp TEEEEEEEGGGCC---CBCCHHHHHHHTHHHHHHHHHHTCCEEEEEEC-STHHHHHHHHHHC-
T ss_pred cEEEEEEECCCcccCCCccchhHHHHHhHHHHHHhhccCCeEEEEeCC-HHHHHHHHHHHHHc
Confidence 333 355566666656677666556899999999 68988888777543
No 16
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.91 E-value=1.9e-24 Score=209.43 Aligned_cols=173 Identities=22% Similarity=0.355 Sum_probs=132.6
Q ss_pred cChHHHHHHhCCC-----CCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhh-cCCCCCeEEEEeeCCCc
Q psy12838 240 VPVEYLFELFSPI-----RPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLA-ALNPGDSVAISIKRGSF 313 (494)
Q Consensus 240 ~~l~~ll~~lp~~-----~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~Gd~v~i~~p~G~F 313 (494)
.|+|++...+|.. .+|+|||+|+|.+ +.++|+|+.+.. +....|.+|+||. ++++|+.|.|.+|.|.|
T Consensus 35 ~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~~--~~~~i~vk~~~~----~~~~~G~~S~~l~~~l~~G~~v~v~gP~G~~ 108 (243)
T 4eh1_A 35 QPGQYIGIEVTPEGSDYREIRQYSLSHASNG--REYRISVKREGV----GSDNPGLVSHYLHNNVKVGDSVKLYAPAGDF 108 (243)
T ss_dssp CTTCEEEEEECCSSCSSCEEEEEEBCSCCCS--SCEEEEEECTTT----TSSSCCHHHHHHHHHCCTTCEEEEEEEECSC
T ss_pred CCCCEEEEEEecCCCccccceeeEeccCCCC--CeEEEEEEEeec----CCCCCCeehhHHHhcCCCCCEEEEEccCccc
Confidence 4666665555521 4699999999865 789999986521 1224699999996 69999999999999999
Q ss_pred cCCCCCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcCCCeEEE--e-----
Q psy12838 314 VFPKNEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLTFYV--Q----- 386 (494)
Q Consensus 314 ~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~~l~~yV--q----- 386 (494)
.++ +..+++||||+||||||++++++++..++. .. ++|+||+|+. .|++|.++|+++.....++.++ .
T Consensus 109 ~~~-~~~~~~vliagGtGitp~~~~l~~l~~~~~-~~--v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~s~~~~~ 183 (243)
T 4eh1_A 109 FYV-ERERPVVLISAGVGATPMQAILHTLAKQNK-SG--VTYLYACNSA-KEHTFAQETAQLIAQQGWMQQVWYRDESAD 183 (243)
T ss_dssp CCC-CCSSCEEEEEEGGGHHHHHHHHHHHHHTTC-CS--EEEEEEESSG-GGCTTHHHHHHHHHHHTCEEEEEESSCCCT
T ss_pred CcC-CCCCCEEEEEccccHHHHHHHHHHHHHcCC-Ce--EEEEEEeCCh-hhhhHHHHHHHHHHhCCeEEEEEEccCCCc
Confidence 988 568899999999999999999999998765 23 6899999998 5999999999988754554222 1
Q ss_pred ----cccccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHHH
Q psy12838 387 ----HVMSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVETI 428 (494)
Q Consensus 387 ----d~l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i~ 428 (494)
..+.. ..+ .+...+..||+||| +.|+++|++.|.+..
T Consensus 184 ~~~~g~~~~--~~~--~~~~~~~~vyvCGp-~~m~~~v~~~l~~~g 224 (243)
T 4eh1_A 184 DVLQGEMQL--AEL--ILPIEDGDFYLCGP-IGFMQYVVKQLLALG 224 (243)
T ss_dssp TCEESSCCC--TTS--CCCTTTCEEEEEEC-HHHHHHHHHHHHHHT
T ss_pred ccccCCccH--HHe--eccCCCcEEEEECC-HHHHHHHHHHHHHcC
Confidence 11111 112 23335789999999 689999999998753
No 17
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.91 E-value=8.8e-24 Score=205.94 Aligned_cols=174 Identities=20% Similarity=0.330 Sum_probs=133.9
Q ss_pred cChHHHHHHhCC-CCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhh-cCCCCCeEEEEeeCCCccCCC
Q psy12838 240 VPVEYLFELFSP-IRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLA-ALNPGDSVAISIKRGSFVFPK 317 (494)
Q Consensus 240 ~~l~~ll~~lp~-~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~Gd~v~i~~p~G~F~lp~ 317 (494)
.|+|++...+|. ..+|+|||+|+|.+. +.++|+|+.++ .|.+|+||. ++++||.|.|.+|.|.|.++.
T Consensus 45 ~pGQ~v~l~~~~~~~~R~ySi~s~~~~~-~~l~i~vk~~~---------~G~~s~~l~~~l~~Gd~v~v~gP~G~~~~~~ 114 (250)
T 1tvc_A 45 EPGQFMDLTIPGTDVSRSYSPANLPNPE-GRLEFLIRVLP---------EGRFSDYLRNDARVGQVLSVKGPLGVFGLKE 114 (250)
T ss_dssp CSCCEEEECTTSCSSSEEECCBCCSSSS-CCEEEEECCCT---------TSSSHHHHHHHSSSSSEEEEEEEECCCSCCC
T ss_pred CCCcEEEEEeCCCccccccccCCCCCCC-CeEEEEEEECC---------CCCchHHHHhcCCCCCEEEEEcCccccccCc
Confidence 466665555665 678999999999753 88999998753 599999995 899999999999999999887
Q ss_pred CCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHc-CCCeEEE-eccccc----
Q psy12838 318 NEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTFYV-QHVMSR---- 391 (494)
Q Consensus 318 ~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~-~~l~~yV-qd~l~~---- 391 (494)
+..+++||||+||||||++++++++...+. .. .++|+||+|+. .|++|.++|+++... ..+++++ ...-.+
T Consensus 115 ~~~~~~vliagGtGiaP~~~~l~~l~~~~~-~~-~v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~g 191 (250)
T 1tvc_A 115 RGMAPRYFVAGGTGLAPVVSMVRQMQEWTA-PN-ETRIYFGVNTE-PELFYIDELKSLERSMRNLTVKACVWHPSGDWEG 191 (250)
T ss_dssp CSSSCEEEEEESSTTHHHHHHHHHHHHHTC-CS-CEEEEEECSSS-TTCCCHHHHHHHHHHSSSCEEEECCSSCSSCCSS
T ss_pred cCCceEEEEEeccCHHHHHHHHHHHHhcCC-Cc-eEEEEEEeCCH-HHhhhHHHHHHHHHhCCCeEEEEEeccCCCCcCC
Confidence 656899999999999999999999987653 22 36899999999 589999999999753 4455322 110000
Q ss_pred ---C-hhHHHHhhcc--CCCEEEEeCCCCchHHHHHHHHHHH
Q psy12838 392 ---H-LPLLQDLICS--HQATVLIAGNANDMPTAVREVLVET 427 (494)
Q Consensus 392 ---~-~~~l~~~l~~--~~~~vYvCGp~~~M~~~V~~~L~~i 427 (494)
. .+.+.+.+.+ .+..||+||| +.|+++|++.|.+.
T Consensus 192 ~~g~v~~~l~~~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~ 232 (250)
T 1tvc_A 192 EQGSPIDALREDLESSDANPDIYLCGP-PGMIDAACELVRSR 232 (250)
T ss_dssp SSSSSSHHHHHHHHHSSSSSEEEEESS-HHHHHHHHHHHHHH
T ss_pred ccceehHHHHhhhhcccCCcEEEEeCC-HHHHHHHHHHHHHc
Confidence 0 1233344322 4789999999 68999999998764
No 18
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.90 E-value=1.7e-23 Score=202.88 Aligned_cols=175 Identities=21% Similarity=0.309 Sum_probs=132.4
Q ss_pred cChHHHHHHhC---CCCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCCCCeEEEEeeCCCccCC
Q psy12838 240 VPVEYLFELFS---PIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNPGDSVAISIKRGSFVFP 316 (494)
Q Consensus 240 ~~l~~ll~~lp---~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~Gd~v~i~~p~G~F~lp 316 (494)
.|+|++...+| ....|+|||+|.+.+ .+.++|+|++++ .|.+|+||+++++||.|.|.+|.|.|.++
T Consensus 43 ~pGq~v~l~~~~~g~~~~R~ysi~s~~~~-~~~~~l~vk~~~---------~G~~S~~l~~l~~Gd~v~v~gP~G~f~~~ 112 (243)
T 2eix_A 43 PIGQHMSVKATVDGKEIYRPYTPVSSDDE-KGYFDLIIKVYE---------KGQMSQYIDHLNPGDFLQVRGPKGQFDYK 112 (243)
T ss_dssp CTTCEEEEEEEETTEEEEEEECCCSCTTC-CSEEEEEEECCT---------TCHHHHHHHTCCTTCEEEEEEEECSCCCC
T ss_pred CCceEEEEEEeeCCCEEEeeeeecCCCCC-CCEEEEEEEEcC---------CCCcchHhhcCCCCCEEEEECCeEEEEeC
Confidence 35555444443 236799999999865 389999998753 69999999999999999999999999988
Q ss_pred CCCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcC-CCeEE-Eecc------
Q psy12838 317 KNEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQAN-QLTFY-VQHV------ 388 (494)
Q Consensus 317 ~~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~-~l~~y-Vqd~------ 388 (494)
.+..+++||||+||||||++++++++..... ....++|+||+|+. .|++|.+||+++.... .++++ +.+.
T Consensus 113 ~~~~~~~vliagG~GiaP~~~~l~~l~~~~~-~~~~v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~ 190 (243)
T 2eix_A 113 PNMVKEMGMIAGGTGITPMLQVARAIIKNPK-EKTIINLIFANVNE-DDILLRTELDDMAKKYSNFKVYYVLNNPPAGWT 190 (243)
T ss_dssp TTSSSEEEEEEEGGGHHHHHHHHHHHHTCTT-CCCEEEEEEEEEEG-GGCTTHHHHHHHHHHCTTEEEEEEEEECCTTCC
T ss_pred CCCCcEEEEEecCccHHHHHHHHHHHHhCCC-CCcEEEEEEEcCCH-HHhhHHHHHHHHHHHCCCeEEEEEeCCCCcccc
Confidence 7667899999999999999999999987532 22346899999998 6899999999997643 44422 2111
Q ss_pred -ccc--ChhHHHHhhcc--CCCEEEEeCCCCchHHHHHHHHHHH
Q psy12838 389 -MSR--HLPLLQDLICS--HQATVLIAGNANDMPTAVREVLVET 427 (494)
Q Consensus 389 -l~~--~~~~l~~~l~~--~~~~vYvCGp~~~M~~~V~~~L~~i 427 (494)
... ..+.+.+.+.. .+..||+||| ++|+++|++.|.+.
T Consensus 191 g~~g~v~~~~l~~~~~~~~~~~~vy~CGp-~~m~~~v~~~l~~~ 233 (243)
T 2eix_A 191 GGVGFVSADMIKQHFSPPSSDIKVMMCGP-PMMNKAMQGHLETL 233 (243)
T ss_dssp SEESSCCHHHHHHHSCCTTSSEEEEEESS-HHHHHHHHHHHHHH
T ss_pred CcCCccCHHHHHHhcCCCCCCeEEEEECC-HHHHHHHHHHHHHc
Confidence 000 11234555542 3568999999 68999999998764
No 19
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.90 E-value=1.2e-23 Score=202.48 Aligned_cols=173 Identities=21% Similarity=0.352 Sum_probs=127.1
Q ss_pred cChHHHHHHhCCCCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhH-hhcCCCCCeEEEEeeCCCccCCCC
Q psy12838 240 VPVEYLFELFSPIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNY-LAALNPGDSVAISIKRGSFVFPKN 318 (494)
Q Consensus 240 ~~l~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~-L~~l~~Gd~v~i~~p~G~F~lp~~ 318 (494)
.|+|++...+|...+|+|||+|+|.. ++.++|+|++++ .|.+|++ +.++++||.|.+.+|.|.|.++.+
T Consensus 31 ~pGq~v~l~~~~~~~R~ySi~s~~~~-~~~l~l~i~~~~---------~G~~s~~~~~~l~~Gd~v~v~gP~G~~~~~~~ 100 (232)
T 1qfj_A 31 RAGQYLMVVMDERDKRPFSMASTPDE-KGFIELHIGASE---------INLYAKAVMDRILKDHQIVVDIPHGEAWLRDD 100 (232)
T ss_dssp CTTCEEEEESSSSCEEEEECCSCTTS-TTCEEEEEC---------------CCHHHHHHHHHHSEEEEEEEECSCCCCSC
T ss_pred CCCCEEEEECCCCceeeeecCCCCCC-CCcEEEEEEEcc---------CCchhHHHHHhCCCCCEEEEeCCccceEeCCC
Confidence 46777666667778999999999975 379999999874 4666665 678999999999999999998866
Q ss_pred CCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHc-CCCeEE-Eeccccc-----
Q psy12838 319 EERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTFY-VQHVMSR----- 391 (494)
Q Consensus 319 ~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~-~~l~~y-Vqd~l~~----- 391 (494)
..+++||||+||||||++++++++...+. .. .++|+||+|+. +|++|.++|+++... ..++++ +...-.+
T Consensus 101 ~~~~~vliagG~GitP~~~~l~~l~~~~~-~~-~v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~g~ 177 (232)
T 1qfj_A 101 EERPMILIAGGTGFSYARSILLTALARNP-NR-DITIYWGGREE-QHLYDLCELEALSLKHPGLQVVPVVEQPEAGWRGR 177 (232)
T ss_dssp SSSCEEEEEETTCHHHHHHHHHHHHHHCT-TC-CEEEEEEESSG-GGCTTHHHHHHHHHHCTTEEEEEEESSCCTTCCSE
T ss_pred CCCcEEEEEecccHhHHHHHHHHHHhcCC-CC-cEEEEEeeCCH-HHhhhHHHHHHHHHHCCCeEEEEEEcCCCCCcCCc
Confidence 67899999999999999999999987653 22 36899999999 689999999999764 344422 2111000
Q ss_pred --C-hhHHHHhh-ccCCCEEEEeCCCCchHHHHHHHH-HH
Q psy12838 392 --H-LPLLQDLI-CSHQATVLIAGNANDMPTAVREVL-VE 426 (494)
Q Consensus 392 --~-~~~l~~~l-~~~~~~vYvCGp~~~M~~~V~~~L-~~ 426 (494)
. .+.+.+.+ ...+..+|+||| ++|++++++.| .+
T Consensus 178 ~g~v~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~ 216 (232)
T 1qfj_A 178 TGTVLTAVLQDHGTLAEHDIYIAGR-FEMAKIARDLFCSE 216 (232)
T ss_dssp ESCHHHHHHHHCSCCTTCEEEEESC-HHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHhcCCccccEEEEECC-HHHHHHHHHHHHHH
Confidence 0 01222222 224688999999 68999999888 54
No 20
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.90 E-value=4.7e-24 Score=209.61 Aligned_cols=166 Identities=17% Similarity=0.261 Sum_probs=126.6
Q ss_pred cChHHHHHHhCC---CCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCCCCeEEEEeeCCC-ccC
Q psy12838 240 VPVEYLFELFSP---IRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNPGDSVAISIKRGS-FVF 315 (494)
Q Consensus 240 ~~l~~ll~~lp~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~Gd~v~i~~p~G~-F~l 315 (494)
.|+|++...+|. ..+|+|||+|+|... +.++|+|+.++ .|.+|+||+++++||.|.+.+|.|. |.+
T Consensus 35 ~pGQ~v~l~~~~~~~~~~R~ySi~s~~~~~-~~l~~~vk~~~---------~G~~S~~l~~l~~Gd~v~v~gP~G~~f~l 104 (262)
T 1ep3_B 35 LPGQFLHLAVPNGAMLLRRPISISSWDKRA-KTCTILYRIGD---------ETTGTYKLSKLESGAKVDVMGPLGNGFPV 104 (262)
T ss_dssp STTCEEEECCSCTTCCSCEEEECCEEETTT-TEEEEEEECCC---------TTSHHHHHHTCCTTCEEEEEEEESBCCCC
T ss_pred CCCceEEEEcCCCCceeeEEEEeeeecCCC-CEEEEEEEEec---------CCchHHHHhcCCCCCEEEEEcccCCCccC
Confidence 466665555553 689999999998643 89999998753 5899999999999999999999997 998
Q ss_pred CCC-CCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcCCCeEEEe--cccc--
Q psy12838 316 PKN-EERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLTFYVQ--HVMS-- 390 (494)
Q Consensus 316 p~~-~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~~l~~yVq--d~l~-- 390 (494)
+.+ ..+++||||+|||||||+++++++..++. .++|+||+|+. +|++|.++|+++... ++++. +...
T Consensus 105 ~~~~~~~~~lliagGtGitP~~s~l~~l~~~~~----~v~l~~~~r~~-~~~~~~~el~~l~~~---~~~~~~~~~~~~~ 176 (262)
T 1ep3_B 105 AEVTSTDKILIIGGGIGVPPLYELAKQLEKTGC----QMTILLGFASE-NVKILENEFSNLKNV---TLKIATDDGSYGT 176 (262)
T ss_dssp TTCCTTSEEEEEEEGGGSHHHHHHHHHHHHHTC----EEEEEEEESSG-GGCCCHHHHHTSTTE---EEEEEETTCSSSE
T ss_pred CCccCCCeEEEEECcCcHHHHHHHHHHHHHcCC----eEEEEEEcCCH-HHhhhHHHHhhhccC---cEEEEECCCCCcc
Confidence 864 47899999999999999999999987542 36899999999 589999999886432 22222 1100
Q ss_pred -cCh-hHHHHhhccCCCEEEEeCCCCchHHHHHHHHHH
Q psy12838 391 -RHL-PLLQDLICSHQATVLIAGNANDMPTAVREVLVE 426 (494)
Q Consensus 391 -~~~-~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~ 426 (494)
... +.+.+.+. .+..||+||| +.|++++++ |.+
T Consensus 177 ~g~v~~~l~~~~~-~~~~vyvCGp-~~m~~~v~~-l~~ 211 (262)
T 1ep3_B 177 KGHVGMLMNEIDF-EVDALYTCGA-PAMLKAVAK-KYD 211 (262)
T ss_dssp ESCHHHHHHHCCS-CCSEEEEESC-HHHHHHHHH-HTT
T ss_pred eeehHHHHHhhcc-CCCEEEEECC-HHHHHHHHH-HHh
Confidence 011 12233233 3689999999 689999988 754
No 21
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.90 E-value=3.2e-23 Score=204.72 Aligned_cols=184 Identities=19% Similarity=0.293 Sum_probs=134.0
Q ss_pred cChHHHHHHhC---CCCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCCCCeEEEEeeCCCccC-
Q psy12838 240 VPVEYLFELFS---PIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNPGDSVAISIKRGSFVF- 315 (494)
Q Consensus 240 ~~l~~ll~~lp---~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~Gd~v~i~~p~G~F~l- 315 (494)
.|+|++...++ ...+|+|||+|++.+ ++.++|+|+++.+.+..+....|.+|+||+++++||.|.|.+|.|.|.+
T Consensus 48 ~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~-~~~~~l~vk~~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~v~gP~G~~~~~ 126 (275)
T 1umk_A 48 PVGQHIYLSARIDGNLVVRPYTPISSDDD-KGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQ 126 (275)
T ss_dssp CTTCEEEEEEEETTEEEEEEECCSSCTTC-CSEEEEEEECCCSSSBTTBTTCCHHHHHHHHCCTTCEEEEEEEECSEEEE
T ss_pred CCCcEEEEEEeeCCcEEEeccccCCccCC-CCeEEEEEEEeccCcccccCCCChhHHHHhcCCCCCEEEEEcCccceEec
Confidence 35555443332 247899999999865 3899999998754443333346999999999999999999999998754
Q ss_pred -------CCC--------CCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcC-
Q psy12838 316 -------PKN--------EERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQAN- 379 (494)
Q Consensus 316 -------p~~--------~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~- 379 (494)
+.+ ..+++||||+|||||||++|++++..... ....++|+||+|+. .|++|.+||+++.+..
T Consensus 127 ~~~~f~l~~~~~~~~~~~~~~~~vliagGtGIaP~~~~l~~l~~~~~-~~~~v~l~~~~r~~-~d~~~~~el~~l~~~~~ 204 (275)
T 1umk_A 127 GKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPD-DHTVCHLLFANQTE-KDILLRPELEELRNKHS 204 (275)
T ss_dssp ETTEEEECSSTTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHTCTT-CCCEEEEEEEESSG-GGCTTHHHHHHHHHHCT
T ss_pred CCccccccccccccccccCCceEEEEecCccHhHHHHHHHHHHhCCC-CCcEEEEEEEcCCH-HHhhHHHHHHHHHHhCc
Confidence 321 36799999999999999999999987532 23346899999998 6999999999998753
Q ss_pred -CCeE-EEeccc-------cc--ChhHHHHhhcc--CCCEEEEeCCCCchHH-HHHHHHHHH
Q psy12838 380 -QLTF-YVQHVM-------SR--HLPLLQDLICS--HQATVLIAGNANDMPT-AVREVLVET 427 (494)
Q Consensus 380 -~l~~-yVqd~l-------~~--~~~~l~~~l~~--~~~~vYvCGp~~~M~~-~V~~~L~~i 427 (494)
.+++ ++.+.- .. ....+.+.+.. .++.||+||| +.|++ ++++.|.+.
T Consensus 205 ~~~~~~~~~s~~~~~~~~~~g~v~~~~l~~~l~~~~~~~~vyvCGp-~~m~~~~v~~~L~~~ 265 (275)
T 1umk_A 205 ARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGP-PPMIQYACLPNLDHV 265 (275)
T ss_dssp TTEEEEEEESSCCSSCSSEESSCCHHHHHHHSCCGGGCCEEEEESC-HHHHHHTTHHHHHHH
T ss_pred CcEEEEEEEcCCCccccCccCccCHHHHHHhcCCCCCCeEEEEECC-HHHHHHHHHHHHHHc
Confidence 3542 222211 00 11234455432 3689999999 68998 898888765
No 22
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.89 E-value=1.2e-23 Score=204.65 Aligned_cols=173 Identities=24% Similarity=0.326 Sum_probs=128.9
Q ss_pred cChHHHHHHhC---CCCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCCCCeEEEE-eeCCCccC
Q psy12838 240 VPVEYLFELFS---PIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNPGDSVAIS-IKRGSFVF 315 (494)
Q Consensus 240 ~~l~~ll~~lp---~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~Gd~v~i~-~p~G~F~l 315 (494)
.|+|++...+| ...+|+|||+|+|.+ +.++|+|+.++ .|.+|+||+++++||.|.+. +|.|.|.+
T Consensus 32 ~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~l~~~v~~~~---------~G~~s~~l~~l~~Gd~v~v~~gP~G~f~l 100 (248)
T 1fdr_A 32 TAGQFTKLGLEIDGERVQRAYSYVNSPDN--PDLEFYLVTVP---------DGKLSPRLAALKPGDEVQVVSEAAGFFVL 100 (248)
T ss_dssp CTTCEEEEEECC---CEEEEEECCSCTTC--SSEEEEEECCT---------TCSSHHHHHTCCTTCEEEEESSCBCCCSG
T ss_pred CCCCcEEEEccCCCCeeeeeecccCCCCC--CcEEEEEEEeC---------CCchhhHHHhCCCcCEEEEecCCcceeEc
Confidence 46666555555 246799999999975 78999998763 69999999999999999999 99999998
Q ss_pred CCCC-CCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHc--CCCeEE--Eeccc-
Q psy12838 316 PKNE-ERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA--NQLTFY--VQHVM- 389 (494)
Q Consensus 316 p~~~-~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~--~~l~~y--Vqd~l- 389 (494)
+.+. .+++||||+||||||++++++++...+. ...++|+||+|+. .|++|.++|+++... +.++++ +.+.-
T Consensus 101 ~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~--~~~v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~~s~~~~ 177 (248)
T 1fdr_A 101 DEVPHCETLWMLATGTAIGPYLSILRLGKDLDR--FKNLVLVHAARYA-ADLSYLPLMQELEKRYEGKLRIQTVVSRETA 177 (248)
T ss_dssp GGSCCCSEEEEEEEGGGGHHHHHHHHHCCSCTT--CSEEEEEEEESSG-GGCTTHHHHHHHHHHTTTSEEEEEEESSSCC
T ss_pred CCCCCCceEEEEEecccHHHHHHHHHHHHhhCC--CCcEEEEEEcCCH-HHhhHHHHHHHHHHhCcCcEEEEEEEecCCC
Confidence 7653 6899999999999999999998765433 2346899999998 689999999999764 344422 11100
Q ss_pred ----ccCh-hHHH-----Hh----hccCCCEEEEeCCCCchHHHHHHHH-HHH
Q psy12838 390 ----SRHL-PLLQ-----DL----ICSHQATVLIAGNANDMPTAVREVL-VET 427 (494)
Q Consensus 390 ----~~~~-~~l~-----~~----l~~~~~~vYvCGp~~~M~~~V~~~L-~~i 427 (494)
.... +.+. +. ....+..||+||| ++|+++|++.| .+.
T Consensus 178 ~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~vy~CGp-~~m~~~v~~~l~~~~ 229 (248)
T 1fdr_A 178 AGSLTGRIPALIESGELESTIGLPMNKETSHVMLCGN-PQMVRDTQQLLKETR 229 (248)
T ss_dssp TTEEESCHHHHHHTSHHHHHHTSCCCTTTEEEEEEEC-HHHHHHHHHHHHHHH
T ss_pred CCCcceeeChHHHhhhHHHhhccCCCccCCEEEEeCC-HHHHHHHHHHHHHHc
Confidence 0111 1111 11 1224678999999 68999999998 664
No 23
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.89 E-value=4.9e-23 Score=204.84 Aligned_cols=171 Identities=20% Similarity=0.423 Sum_probs=125.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEEEEEe--ecCC----CCCccCchhhHhhcCCCCCeEEEEeeCCCccCCCCCCCCEEE
Q psy12838 252 IRPRAFSIASSPKTHSGELHLLVAIVKY--KTKM----LAPRYGLCSNYLAALNPGDSVAISIKRGSFVFPKNEERPLIM 325 (494)
Q Consensus 252 ~~pR~YSIaSsp~~~~~~i~l~V~~v~~--~~~~----~~~~~G~~S~~L~~l~~Gd~v~i~~p~G~F~lp~~~~~piIm 325 (494)
..+|+|||+|+|.+. +.++|+|+++.. .+.. .+...|.+|+||.++++||.|.|.+|.|.|.++. ..+++||
T Consensus 84 ~~~R~ySi~s~~~~~-~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~l~~Gd~v~v~gP~G~f~~~~-~~~~~vl 161 (290)
T 2r6h_A 84 ETVRAYSMANYPAEG-NIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGDKVMMSGPYGDFHIQD-TDAEMLY 161 (290)
T ss_dssp CEEEEEECCSCTTCC-SEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTTCCTTCEEEEEEEECCCCCCS-SSCEEEE
T ss_pred CcceeeeccCCCCCC-CEEEEEEEEeccccccccccccccCCCcchhhHHhcCCCCCEEEEEecccCCcCCC-CCCeEEE
Confidence 468999999999753 899999986421 1100 0124699999999999999999999999998774 4789999
Q ss_pred EecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHc-CCCeEEEe-ccc---------ccCh-
Q psy12838 326 VGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTFYVQ-HVM---------SRHL- 393 (494)
Q Consensus 326 Ia~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~-~~l~~yVq-d~l---------~~~~- 393 (494)
||+|||||||++|++++..... ....++||||+|+. .|++|.++|+++... ..+++++. ..- ....
T Consensus 162 iagGtGitP~~s~l~~~~~~~~-~~~~v~l~~~~r~~-~d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~~g~~g~v~ 239 (290)
T 2r6h_A 162 IGGGAGMAPLRAQILHLFRTLK-TGRKVSYWYGARSK-NEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIH 239 (290)
T ss_dssp EEEGGGHHHHHHHHHHHHHTSC-CCSCEEEEEEESSG-GGCCSHHHHHHHHHHCTTEEEEEEESSCCGGGCCCSCBSCHH
T ss_pred EECccCHHHHHHHHHHHHHhcC-CCCcEEEEEEcCCH-HHHHHHHHHHHHHHhCCCeEEEEEEccCCcccCCCCeeEecC
Confidence 9999999999999999887543 22346899999999 689999999999764 34443221 110 0011
Q ss_pred hHH-HHhhc----cCCCEEEEeCCCCchHHHHHHHHHHH
Q psy12838 394 PLL-QDLIC----SHQATVLIAGNANDMPTAVREVLVET 427 (494)
Q Consensus 394 ~~l-~~~l~----~~~~~vYvCGp~~~M~~~V~~~L~~i 427 (494)
+.+ .+++. ..++.||+||| +.|+++|++.|.+.
T Consensus 240 ~~~~~~~l~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~ 277 (290)
T 2r6h_A 240 QVIYDNYLKDHDAPEDIEYYMCGP-GPMANAVKGMLENL 277 (290)
T ss_dssp HHHHHHTTTTCSCGGGEEEEEECC-HHHHHHHHHHHHHH
T ss_pred HHHHHhHHhhccCcCCcEEEEECC-HHHHHHHHHHHHHc
Confidence 111 22232 12568999999 68999999999765
No 24
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.89 E-value=7.9e-24 Score=214.23 Aligned_cols=171 Identities=17% Similarity=0.204 Sum_probs=132.9
Q ss_pred cChHHHHHHhCCCCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCc-hhhHhh-cCCCCCeEEEEeeCCCccCCC
Q psy12838 240 VPVEYLFELFSPIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGL-CSNYLA-ALNPGDSVAISIKRGSFVFPK 317 (494)
Q Consensus 240 ~~l~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~-~S~~L~-~l~~Gd~v~i~~p~G~F~lp~ 317 (494)
.|+|++...+|...+|+|||+|+|.+. +.++|+|+.++ .|. +|+||+ ++++||.|.|.+|.|.|.++.
T Consensus 40 ~pGQ~v~l~~~~g~~R~ySi~s~~~~~-~~l~i~Vk~~~---------~G~g~S~~L~~~l~~Gd~v~v~gP~g~f~l~~ 109 (321)
T 2pia_A 40 EAGANLTVAVPNGSRRTYSLCNDSQER-NRYVIAVKRDS---------NGRGGSISFIDDTSEGDAVEVSLPRNEFPLDK 109 (321)
T ss_dssp CTTCEEEEECTTSCEEEEECCSCTTCC-SEEEEEEECCT---------TSCSHHHHHHHSCCTTCEEEECCCBCCSCCCT
T ss_pred CCCCEEEEECCCCCcEEEEeCCCCCCC-CeEEEEEEEec---------CCcchhHHHHhcCCCCCEEEEeCCccccccCC
Confidence 466666555666689999999999753 78999998753 587 999998 899999999999999999886
Q ss_pred CCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcCCCeEEEecccccChhHHH
Q psy12838 318 NEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLTFYVQHVMSRHLPLLQ 397 (494)
Q Consensus 318 ~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~~l~~yVqd~l~~~~~~l~ 397 (494)
+ .+++||||+|||||||++|++++...+. ..++|+||+|+. .|++|.++|+++.....++++..+.-......+.
T Consensus 110 ~-~~~~vliagG~GItP~~s~l~~l~~~~~---~~v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~~~~g~~~~~ 184 (321)
T 2pia_A 110 R-AKSFILVAGGIGITPMLSMARQLRAEGL---RSFRLYYLTRDP-EGTAFFDELTSDEWRSDVKIHHDHGDPTKAFDFW 184 (321)
T ss_dssp T-CSEEEEEEEGGGHHHHHHHHHHHHHHCS---SEEEEEEEESCG-GGCTTHHHHHSTTTTTTEEEEECTTCTTSCCCHH
T ss_pred C-CCCEEEEEecccHhHHHHHHHHHHHcCC---CcEEEEEEECCh-hhhHHHHHHhcCccCCeEEEEECCCcccCccCHH
Confidence 5 7899999999999999999999987652 236899999999 6899999999875323454443221101112344
Q ss_pred Hhhcc--CCCEEEEeCCCCchHHHHHHHHHH
Q psy12838 398 DLICS--HQATVLIAGNANDMPTAVREVLVE 426 (494)
Q Consensus 398 ~~l~~--~~~~vYvCGp~~~M~~~V~~~L~~ 426 (494)
+++.. .+..||+||| ++|+++|++.|.+
T Consensus 185 ~ll~~~~~~~~vyvCGP-~~m~~~v~~~l~~ 214 (321)
T 2pia_A 185 SVFEKSKPAQHVYCCGP-QALMDTVRDMTGH 214 (321)
T ss_dssp HHHSSCCTTEEEEEESC-HHHHHHHHHHTTT
T ss_pred HHhcccCCCCEEEEECC-HHHHHHHHHHHHh
Confidence 44432 4678999999 6899999999976
No 25
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.89 E-value=2.6e-23 Score=211.68 Aligned_cols=172 Identities=24% Similarity=0.355 Sum_probs=131.2
Q ss_pred cChHHHHHHhCC-CCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHh-hcCCCCCeEEEEeeCCCccCCC
Q psy12838 240 VPVEYLFELFSP-IRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYL-AALNPGDSVAISIKRGSFVFPK 317 (494)
Q Consensus 240 ~~l~~ll~~lp~-~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L-~~l~~Gd~v~i~~p~G~F~lp~ 317 (494)
.|+|++...+|. ..+|+|||+|+|. .+.++|+|+.++ .|.+|+|| .++++|+.|.|.+|.|.|.++.
T Consensus 140 ~pGQ~v~l~~~~~~~~R~ySi~s~~~--~~~l~~~vk~~~---------~G~~S~~L~~~l~~Gd~v~v~gP~G~f~~~~ 208 (338)
T 1krh_A 140 LAGQYVNVTLPGTTETRSYSFSSQPG--NRLTGFVVRNVP---------QGKMSEYLSVQAKAGDKMSFTGPFGSFYLRD 208 (338)
T ss_dssp CTTCEEEEECTTSSCEEEEECCSCTT--CSEEEEEEECCT---------TCHHHHHHHTTCCTTCEEEEEEEECSCSCCC
T ss_pred CCCCeEEEEcCCCCccccccccCCCC--CCeEEEEEEEcC---------CCCchhhHhhccCCCCEEEEECCccceEeCC
Confidence 467766555665 6789999999997 389999999763 69999999 5899999999999999999876
Q ss_pred CCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcC-CCeEE--Eeccc-----
Q psy12838 318 NEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQAN-QLTFY--VQHVM----- 389 (494)
Q Consensus 318 ~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~-~l~~y--Vqd~l----- 389 (494)
+ .+++||||+|||||||+++++++...+. .. .++|+||+|+. .|++|.++|+++.... .+++. +...-
T Consensus 209 ~-~~~~vliagGtGiaP~~s~l~~l~~~~~-~~-~v~l~~~~r~~-~d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~ 284 (338)
T 1krh_A 209 V-KRPVLMLAGGTGIAPFLSMLQVLEQKGS-EH-PVRLVFGVTQD-CDLVALEQLDALQQKLPWFEYRTVVAHAESQHER 284 (338)
T ss_dssp C-SSCEEEEEEGGGHHHHHHHHHHHHHHCC-SS-CEEEEEEESSG-GGCCCHHHHHHHHHHCTTEEEEEEETTCCSSSSE
T ss_pred C-CceEEEEEccccHhHHHHHHHHHHHcCC-CC-eEEEEEEeCCH-HHhhhHHHHHHHHHhCCCeEEEEEEecCCCCCCc
Confidence 5 4899999999999999999999987653 22 36899999998 6899999999987643 34421 11100
Q ss_pred ccC-hhHHH-HhhccCCCEEEEeCCCCchHHHHHHHHHHH
Q psy12838 390 SRH-LPLLQ-DLICSHQATVLIAGNANDMPTAVREVLVET 427 (494)
Q Consensus 390 ~~~-~~~l~-~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i 427 (494)
... .+.+. +.+.+.+..||+||| +.|++++++.|.+.
T Consensus 285 ~g~v~~~l~~~~~~~~~~~vy~CGp-~~m~~~v~~~l~~~ 323 (338)
T 1krh_A 285 KGYVTGHIEYDWLNGGEVDVYLCGP-VPMVEAVRSWLDTQ 323 (338)
T ss_dssp ESCSGGGCCGGGGGGGCSEEEEEEE-HHHHHHHHHHHHHH
T ss_pred cCccCHHHHHhhcccCCcEEEEECC-HHHHHHHHHHHHHc
Confidence 000 01111 122224678999999 68999999998764
No 26
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.89 E-value=1.9e-24 Score=213.12 Aligned_cols=175 Identities=22% Similarity=0.298 Sum_probs=129.5
Q ss_pred cChHHHHHHhC---CCCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCCCCeEEEE-eeCCCccC
Q psy12838 240 VPVEYLFELFS---PIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNPGDSVAIS-IKRGSFVF 315 (494)
Q Consensus 240 ~~l~~ll~~lp---~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~Gd~v~i~-~p~G~F~l 315 (494)
.|+|++...+| ...+|+|||+|+|.. +.++|+|+.++ .|.+|+||+++++||.|.+. +|.|.|.+
T Consensus 48 ~pGQ~v~l~~~~~~~~~~r~ySi~s~~~~--~~~~~~v~~~~---------~G~~s~~l~~l~~Gd~v~v~~gP~G~~~~ 116 (271)
T 4fk8_A 48 NNGEFTMVGLEVDGKPLTRAYSIVSPNYE--EHLEFFSIKVQ---------NGPLTSRLQHLKVGDPVLIGKKPTGTLVA 116 (271)
T ss_dssp CTTCEEEEEEEETTEEEEEEEECCSCTTS--SSEEEEEECCT---------TCTTHHHHTTCCTTCEEEEESCCBCSCCG
T ss_pred CCCCEEEEEccCCCceeeeeEeccCCCCC--CcEEEEEEEEC---------CCchhhHHhcCCCCCEEEEecCCCcceec
Confidence 46666655555 235799999999864 67999988752 69999999999999999999 99999988
Q ss_pred CC-CCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcCC---------CeEEE
Q psy12838 316 PK-NEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQ---------LTFYV 385 (494)
Q Consensus 316 p~-~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~~---------l~~yV 385 (494)
+. ...+++||||+||||||++++++++...+. .. .++|+||+|+. .|++|.++|+++.+... ++.++
T Consensus 117 ~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~-~~-~v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~ 193 (271)
T 4fk8_A 117 DNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYER-FD-KVVLTHTCRLK-GELAYMDYIKHDLPGHEYLGDVIREKLVYYP 193 (271)
T ss_dssp GGBCCCSEEEEEECGGGGHHHHHHTTCHHHHHH-CS-EEEEEECCCSH-HHHHHHHHHHTCCTTCTTHHHHHHHHEEEEE
T ss_pred CCcCCCCeEEEEECCEEHHHHHHHHHHHHhcCC-CC-CEEEEEecCCH-HHHhHHHHHHHHHHhCccccccccceEEEEE
Confidence 75 357899999999999999999999876443 22 36899999999 68999999998765432 33322
Q ss_pred ec-ccc-cChhHHHH---------h-----hccCCCEEEEeCCCCchHHHHHHHHHHHHh
Q psy12838 386 QH-VMS-RHLPLLQD---------L-----ICSHQATVLIAGNANDMPTAVREVLVETIT 429 (494)
Q Consensus 386 qd-~l~-~~~~~l~~---------~-----l~~~~~~vYvCGp~~~M~~~V~~~L~~i~~ 429 (494)
.- .-. .....+.+ . +...++.||+||| +.|+++|+++|.+...
T Consensus 194 ~~s~~~~~~~G~v~~~~~~~~l~~~~~~~~~~~~~~~v~vCGp-~~m~~~v~~~l~~~gv 252 (271)
T 4fk8_A 194 TVTREEFENEGRITDLIASGKLFTDLDMPPFSPEQDRVMLCGS-TAMLKDTTELLKKAGL 252 (271)
T ss_dssp CC-------CCHHHHHHHHSHHHHHTTCCCCCTTTEEEEEEEC-HHHHHHHHHHHHHTTC
T ss_pred EecCCccccccccChHHhcchhhhhcccccCCCCCCEEEEECC-HHHHHHHHHHHHHcCC
Confidence 10 000 00111111 1 1224688999999 6999999999987544
No 27
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.88 E-value=1.7e-22 Score=210.29 Aligned_cols=178 Identities=18% Similarity=0.255 Sum_probs=135.4
Q ss_pred cChHHHHHHh--C--C---CCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhh-cCCCCCeEEEEeeCC
Q psy12838 240 VPVEYLFELF--S--P---IRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLA-ALNPGDSVAISIKRG 311 (494)
Q Consensus 240 ~~l~~ll~~l--p--~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~Gd~v~i~~p~G 311 (494)
.|+|++...+ | + ..+|+|||+|+|.. +.++|+|+.... ......|.+|+||. ++++||.|.+.+|.|
T Consensus 185 ~pGQ~v~l~~~~~~~~~~~~~~R~ySi~s~p~~--~~~~i~Vk~~~~---~~~~~~G~~S~~L~~~l~~Gd~v~v~gP~G 259 (399)
T 4g1v_A 185 TPGQYITVNTHPIRQENQYDALRHYSLCSASTK--NGLRFAVKMEAA---RENFPAGLVSEYLHKDAKVGDEIKLSAPAG 259 (399)
T ss_dssp CTTCEEEEEECCCSTTCCSCEEEEEEBSCSCCT--TCEEEEEECCCC---BTTBCCCHHHHHHHHTCCTTCEEEEEEEEC
T ss_pred CCCCEEEEEEeCCCCCCccceeeeecccCCCCC--CeEEEEEEeccC---CCCCCCCEehhHHHhCCCCCCEEEEEeccc
Confidence 4666655443 3 3 35799999999974 789999987421 01113799999996 899999999999999
Q ss_pred CccCCCC----CCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcC-CCeEE--
Q psy12838 312 SFVFPKN----EERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQAN-QLTFY-- 384 (494)
Q Consensus 312 ~F~lp~~----~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~-~l~~y-- 384 (494)
.|.++.+ ..+|+||||+|||||||++|++++...+. .. .++++||+|+. .|++|.++|+++.+.. .++.+
T Consensus 260 ~f~l~~~~~~~~~~~~vlIagG~GitP~~s~l~~l~~~~~-~~-~v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~ 336 (399)
T 4g1v_A 260 DFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKCNP-NR-PIYWIQSSYDE-KTQAFKKHVDELLAECANVDKIIV 336 (399)
T ss_dssp SCCCCTTTTTCSSSCEEEEEEGGGHHHHHHHHHHHHHHCT-TS-CEEEEEEESSS-TTSTTHHHHHHHHTTCSSEEEEEE
T ss_pred ceeeCcccccCCCCCEEEEecceeHhHHHHHHHHHHHcCC-CC-CEEEEEecCCH-HHhhhHHHHHHHHHhCCCcEEEEE
Confidence 9999875 57899999999999999999999988664 33 36899999998 6899999999998643 33422
Q ss_pred Eecc-cccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHH
Q psy12838 385 VQHV-MSRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVET 427 (494)
Q Consensus 385 Vqd~-l~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i 427 (494)
+.+. -+-..+.+.+.+.+ ++.||+||| ++|+++|++.|.+.
T Consensus 337 ~s~~~g~~~~~~l~~~~~~-~~~vyvCGp-~~m~~~v~~~L~~~ 378 (399)
T 4g1v_A 337 HTDTEPLINAAFLKEKSPA-HADVYTCGS-LAFMQAMIGHLKEL 378 (399)
T ss_dssp ETTTSCCCCHHHHHHHSCS-SCEEEEEEC-HHHHHHHHHHHHHT
T ss_pred EeCCCCcccHHHHHhhCCC-CCEEEEECC-HHHHHHHHHHHHHc
Confidence 2111 11123455556554 899999999 68999999999765
No 28
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.88 E-value=3.2e-23 Score=204.75 Aligned_cols=173 Identities=20% Similarity=0.311 Sum_probs=128.3
Q ss_pred cChHHHHHHhC----CCCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCCCCeEEEE-eeCCCcc
Q psy12838 240 VPVEYLFELFS----PIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNPGDSVAIS-IKRGSFV 314 (494)
Q Consensus 240 ~~l~~ll~~lp----~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~Gd~v~i~-~p~G~F~ 314 (494)
.|+|++...+| ...+|+|||+|+|.+ +.++|+|+.++ .|.+|+||+++++||.|.+. +|.|.|.
T Consensus 45 ~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~~--~~~~l~v~~~~---------~G~~s~~l~~l~~Gd~v~v~~gP~G~f~ 113 (272)
T 2bgi_A 45 RSGEFVMIGLLDDNGKPIMRAYSIASPAWD--EELEFYSIKVP---------DGPLTSRLQHIKVGEQIILRPKPVGTLV 113 (272)
T ss_dssp CTTCEEEEEEECTTSCEEEEEEECCSCTTC--SEEEEEEECCT---------TCTTHHHHTTCCTTCEEEEEEEEECSCC
T ss_pred CCCCEEEEEeccCCCCeeeeeeeeccCCCC--CeEEEEEEEcc---------CCCchhHHHhCCCCCEEEEeeCCCCccc
Confidence 46666555555 236799999999974 78999998752 69999999999999999999 8999998
Q ss_pred CCCCC-CCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHH-HHHH-----c---CCCeEE
Q psy12838 315 FPKNE-ERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQ-NAIQ-----A---NQLTFY 384 (494)
Q Consensus 315 lp~~~-~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~-~~~~-----~---~~l~~y 384 (494)
++... .+++||||+|||||||+++++++...+. ...++|+||+|+. .|++|.++|+ ++.. . ..++.+
T Consensus 114 ~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~--~~~v~l~~~~r~~-~~~~~~~el~~~l~~~~~~~~~~~~~~~~~ 190 (272)
T 2bgi_A 114 IDALLPGKRLWFLATGTGIAPFASLMREPEAYEK--FDEVIMMHACRTV-AELEYGRQLVEALQEDPLIGELVEGKLKYY 190 (272)
T ss_dssp GGGBCCCSEEEEEEEGGGGHHHHHHTTCGGGGTS--CSEEEEEEEESSS-GGGHHHHHHHHHHHHCTTTTTTSTTTEEEE
T ss_pred ccccccCCeEEEEeecccHHHHHHHHHHHHhcCC--CCcEEEEEEeCCH-HHhhHHHHHHHHHHhcchhhcccCCcEEEE
Confidence 87543 6899999999999999999998766433 2246899999999 6899999999 8876 2 344422
Q ss_pred -Eecccc-cChhHHHHh--------------hccCCCEEEEeCCCCchHHHHHHHHHHH
Q psy12838 385 -VQHVMS-RHLPLLQDL--------------ICSHQATVLIAGNANDMPTAVREVLVET 427 (494)
Q Consensus 385 -Vqd~l~-~~~~~l~~~--------------l~~~~~~vYvCGp~~~M~~~V~~~L~~i 427 (494)
+...-. .....+.+. +...++.||+||| ++|+++|++.|.+.
T Consensus 191 ~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~ 248 (272)
T 2bgi_A 191 PTTTREEFHHMGRITDNLASGKVFEDLGIAPMNPETDRAMVCGS-LAFNVDVMKVLESY 248 (272)
T ss_dssp EEESSSCCSSBCCHHHHHHSCHHHHHHTCCCCCTTTEEEEEEEC-HHHHHHHHHHHHTT
T ss_pred EEecCCccccCceechHHHhhhHhhhcccccCCCCCcEEEEECC-HHHHHHHHHHHHHc
Confidence 211100 001111111 1124678999999 68999999988754
No 29
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.88 E-value=5.9e-23 Score=213.50 Aligned_cols=173 Identities=20% Similarity=0.310 Sum_probs=129.8
Q ss_pred cChHHHHHHhCC-----CCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhc-CCCCCeEEEEeeCCCc
Q psy12838 240 VPVEYLFELFSP-----IRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAA-LNPGDSVAISIKRGSF 313 (494)
Q Consensus 240 ~~l~~ll~~lp~-----~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~-l~~Gd~v~i~~p~G~F 313 (494)
.|+|++...+|+ ..+|+|||+|+|.. +.++|+|+.++ .|.+|+||++ +++||.|.+.+|.|.|
T Consensus 184 ~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~~--~~~~i~Vk~~~---------~G~~S~~L~~~l~~Gd~v~v~gP~G~f 252 (396)
T 1gvh_A 184 RPGQYLGVWLKPEGFPHQEIRQYSLTRKPDG--KGYRIAVKREE---------GGQVSNWLHNHANVGDVVKLVAPAGDF 252 (396)
T ss_dssp CTTCEEEEEECCTTCSSCEEEEEECCSCCCS--SCEEEEEECCT---------TCHHHHHHHHTCCTTCEEEEEEEECSC
T ss_pred CCCCeEEEEecCCCCccceeecceeccCCCC--CeEEEEEEEcC---------CCcchHHHHhcCCCCCEEEEEcCCcce
Confidence 466665544542 34899999999973 78999998652 5999999986 9999999999999999
Q ss_pred cCCCCCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcC-CCeE--EEeccc-
Q psy12838 314 VFPKNEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQAN-QLTF--YVQHVM- 389 (494)
Q Consensus 314 ~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~-~l~~--yVqd~l- 389 (494)
.++.+..+|+||||+||||||++++++++...+. .. .++|+||+|+. .|++|.++|+++.... .++. ++.+.-
T Consensus 253 ~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~~~-~~-~v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~s~~~~ 329 (396)
T 1gvh_A 253 FMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGH-TA-QVNWFHAAENG-DVHAFADEVKELGQSLPRFTAHTWYRQPSE 329 (396)
T ss_dssp CCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHHTC-CS-CEEEEEEESCT-TTCCSHHHHHHHHHTSSSEEEEEEESSCCH
T ss_pred ECCCCCCCCEEEEecchhHhHHHHHHHHHHhcCC-CC-cEEEEEEeCCH-HHhhhHHHHHHHHHHCCCeEEEEEECCCCc
Confidence 9986568899999999999999999999987653 22 36899999999 5899999999998753 3332 221100
Q ss_pred ------------ccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHH
Q psy12838 390 ------------SRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVET 427 (494)
Q Consensus 390 ------------~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i 427 (494)
+-..+.+.+.+...++.||+||| ++|+++|++.|.+.
T Consensus 330 ~~~~~~~~~~~G~~~~~~l~~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~ 378 (396)
T 1gvh_A 330 ADRAKGQFDSEGLMDLSKLEGAFSDPTMQFYLCGP-VGFMQFTAKQLVDL 378 (396)
T ss_dssp HHHHHTCCSEESSCCGGGSSSCCCCTTCEEEEESC-HHHHHHHHHHHHHT
T ss_pred cccccCccCccCcCCHHHHhhccCCCCCEEEEeCC-HHHHHHHHHHHHHc
Confidence 00011121111113689999999 68999999998764
No 30
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.88 E-value=3.2e-22 Score=196.87 Aligned_cols=184 Identities=22% Similarity=0.319 Sum_probs=128.1
Q ss_pred cChHHHHHHhC---CCCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCCCCeEEEEeeCCC----
Q psy12838 240 VPVEYLFELFS---PIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNPGDSVAISIKRGS---- 312 (494)
Q Consensus 240 ~~l~~ll~~lp---~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~Gd~v~i~~p~G~---- 312 (494)
.|+|++...++ ...+|+|||+|++.+ ++.++|+|+++.+.........|.+|+||+++++||.|.|.+|.|.
T Consensus 44 ~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~-~~~~~l~vk~~~~~~~~~~~~~G~~s~~l~~l~~Gd~v~v~gP~G~~~~~ 122 (270)
T 2cnd_A 44 PIGKHIFVCATIEGKLCMRAYTPTSMVDE-IGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYT 122 (270)
T ss_dssp CTTCEEEEEEEETTEEEEEEECCCSCTTC-CSEEEEEEECCCSSCBTTBTTCCHHHHHHHHCCTTCEEEEEEEECSEECC
T ss_pred CCCCEEEEEeeeCCcEEEEeeccCCCccC-CCEEEEEEEEeccCcccccCCCCchhhHHhcCCCCCEEEEECCcccceec
Confidence 35554433332 246899999999875 3899999997621110001135999999999999999999999986
Q ss_pred ----ccCCC--CCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcC--CCeE-
Q psy12838 313 ----FVFPK--NEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQAN--QLTF- 383 (494)
Q Consensus 313 ----F~lp~--~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~--~l~~- 383 (494)
|.++. +..+++||||+|||||||+++++++...+......++|+||+|+. .|++|.+||+++.... .+++
T Consensus 123 ~~g~f~l~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~~~~~~v~l~~~~r~~-~d~~~~~el~~l~~~~~~~~~~~ 201 (270)
T 2cnd_A 123 GRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTE-DDILLRDELDRWAAEYPDRLKVW 201 (270)
T ss_dssp SSSCEEETTEEECCSEEEEEEEGGGHHHHHHHHHHHHHTTTTCCCEEEEEEEESCG-GGCTTHHHHHHHHHHCTTTEEEE
T ss_pred cccceeccCCcccCCEEEEEeccccHHHHHHHHHHHHhcCCCCCcEEEEEEEcCCH-HHcchHHHHHHHHHHCcCcEEEE
Confidence 56664 246899999999999999999999987532122346899999999 5999999999998653 3442
Q ss_pred EEeccc----------cc--ChhHHHHhhcc--CCCEEEEeCCCCchHHH-HHHHHHH
Q psy12838 384 YVQHVM----------SR--HLPLLQDLICS--HQATVLIAGNANDMPTA-VREVLVE 426 (494)
Q Consensus 384 yVqd~l----------~~--~~~~l~~~l~~--~~~~vYvCGp~~~M~~~-V~~~L~~ 426 (494)
++.... .. ....+.+.+.. .++.||+||| ++|+++ +++.|.+
T Consensus 202 ~~~s~~~~~~~~~~~~~g~v~~~~l~~~l~~~~~~~~vyvCGp-~~m~~~~~~~~L~~ 258 (270)
T 2cnd_A 202 YVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGGDDTLALACGP-PPMIQFAISPNLEK 258 (270)
T ss_dssp EEESCCSCGGGCCCSEESSCCHHHHHHHSCCCSSSEEEEEECC-HHHHHTTTHHHHHT
T ss_pred EEECCCCCCCCCcccccccCCHHHHHHhcCCCcCCEEEEEECC-HHHHHHHHHHHHHH
Confidence 332210 00 11223444433 2467999999 689886 4777754
No 31
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.87 E-value=2e-23 Score=204.20 Aligned_cols=173 Identities=21% Similarity=0.287 Sum_probs=126.4
Q ss_pred cChHHHHHHhC---CCCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCCCCeEEEE-eeCCCccC
Q psy12838 240 VPVEYLFELFS---PIRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNPGDSVAIS-IKRGSFVF 315 (494)
Q Consensus 240 ~~l~~ll~~lp---~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~Gd~v~i~-~p~G~F~l 315 (494)
.|+|++...+| ...+|+|||+|+|.+ +.++|+|+.++ .|.+|+||.++++||.|.|. +|.|.|.+
T Consensus 32 ~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~~~~~i~~~~---------~G~~s~~l~~l~~Gd~v~v~~gp~G~f~~ 100 (257)
T 2qdx_A 32 KTGQFVMIGLEVDGRPLMRAYSIASPNYE--EHLEFFSIKVP---------DGPLTSRLQHLKEGDELMVSRKPTGTLVH 100 (257)
T ss_dssp CTTCEEEEEEEETTEEEEEEEECCSCTTS--SEEEEEEECCT---------TCTTHHHHTTCCTTCEEEECSCCBCSCCG
T ss_pred CCCCEEEEEecCCCCceeeeeEeecCCCC--CeEEEEEEEeC---------CCcchhHHHhCCCCCEEEEecCCCCCccC
Confidence 46666544444 246899999999975 78999998762 69999999999999999999 89999988
Q ss_pred CCCC-CCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHH-HHHH--------cCCCeEE-
Q psy12838 316 PKNE-ERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQ-NAIQ--------ANQLTFY- 384 (494)
Q Consensus 316 p~~~-~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~-~~~~--------~~~l~~y- 384 (494)
+... .+++||||+|||||||+++++++...+. . ..++|+||+|+. .|++|.++|+ ++.. ...++.+
T Consensus 101 ~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~-~-~~v~l~~~~r~~-~~~~~~~el~~~l~~~~~~~~~~~~~~~~~~ 177 (257)
T 2qdx_A 101 DDLLPGKHLYLLSTGTGMAPFLSVIQDPETYER-Y-EKVILVHGVRWV-SELAYADFITKVLPEHEYFGDQVKEKLIYYP 177 (257)
T ss_dssp GGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHHH-C-SEEEEEEEESSG-GGCTTHHHHHTTGGGCTTTHHHHHHHEEEEE
T ss_pred CcccCCCeEEEEEeceEHHHHHHHHHHHHhcCC-C-CeEEEEEEcCCH-HHhHhHHHHHHHHHhchhhhccCCCcEEEEE
Confidence 7543 6899999999999999999998876432 1 236899999999 6899999999 7754 1233321
Q ss_pred Eeccc----ccCh-hHHH-----Hh-----hccCCCEEEEeCCCCchHHHHHHHHHHH
Q psy12838 385 VQHVM----SRHL-PLLQ-----DL-----ICSHQATVLIAGNANDMPTAVREVLVET 427 (494)
Q Consensus 385 Vqd~l----~~~~-~~l~-----~~-----l~~~~~~vYvCGp~~~M~~~V~~~L~~i 427 (494)
+...- .... +.+. +. +...++.||+||| ++|+++|++.|.+.
T Consensus 178 ~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~ 234 (257)
T 2qdx_A 178 LVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGS-PSMLEETSAVLDSF 234 (257)
T ss_dssp EESSSCCSSBSCHHHHHHHSHHHHHHTCCCCCTTTEEEEEEEC-HHHHHHHHHHHHHT
T ss_pred EecCCCcccCceechhhhhhhHHHhcccccCCcCCCEEEEECC-HHHHHHHHHHHHHc
Confidence 11110 0111 1111 11 1124678999999 68999999988764
No 32
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.86 E-value=1.3e-21 Score=203.82 Aligned_cols=177 Identities=19% Similarity=0.296 Sum_probs=130.7
Q ss_pred cChHHHHHHhC--C---CCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhh-cCCCCCeEEEEeeCCCc
Q psy12838 240 VPVEYLFELFS--P---IRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLA-ALNPGDSVAISIKRGSF 313 (494)
Q Consensus 240 ~~l~~ll~~lp--~---~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~-~l~~Gd~v~i~~p~G~F 313 (494)
.|+|++...+| . ..+|+|||+|+|.. +.++|+|++++. ...+.|.+|+||+ ++++||.|.|.+|.|.|
T Consensus 186 ~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~~--~~~~i~Vk~~~~----~~~~~G~~S~~L~~~l~~Gd~v~v~gP~G~f 259 (403)
T 1cqx_A 186 EPGQYTSVAIDVPALGLQQIRQYSLSDMPNG--RTYRISVKREGG----GPQPPGYVSNLLHDHVNVGDQVKLAAPYGSF 259 (403)
T ss_dssp CTTCEEEEEEEETTTTEEEEEEEECCSCCCS--SCEEEEEECCCB----TTBCCCHHHHHHHHHCCTTCEEEECCCBCSC
T ss_pred CCCCEEEEEEecCCCCcceeecceecCCCCC--CeEEEEEEECCC----CCCCCCeehHHHhhCCCCCCEEEEecCccCc
Confidence 46666544444 2 34799999999963 789999997631 1123599999998 59999999999999999
Q ss_pred cCCCCCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcC-CCeE--EEeccc-
Q psy12838 314 VFPKNEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQAN-QLTF--YVQHVM- 389 (494)
Q Consensus 314 ~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~-~l~~--yVqd~l- 389 (494)
.++.+..+|+||||+|||||||+++++++.. +. .. .++|+||+|+. .|++|.++|+++.... .++. ++.+.-
T Consensus 260 ~l~~~~~~~~vlIagGtGitP~~s~l~~l~~-~~-~~-~v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~s~~~~ 335 (403)
T 1cqx_A 260 HIDVDAKTPIVLISGGVGLTPMVSMLKVALQ-AP-PR-QVVFVHGARNS-AVHAMRDRLREAAKTYENLDLFVFYDQPLP 335 (403)
T ss_dssp SCCTTCCSCEEEEESSCCHHHHHHHHHHHTC-SS-CC-CEEEEEEESCS-SSCHHHHHHHHHHHHCTTEEEEEEESSCCT
T ss_pred ccCCCCCCCEEEEEecccHhhHHHHHHHHHh-CC-CC-cEEEEEEeCCh-hhCcHHHHHHHHHHhCCCcEEEEEECCCCc
Confidence 9976567899999999999999999999876 32 22 36899999999 5899999999997643 3442 221100
Q ss_pred ------------ccChhHHHHhhccCCCEEEEeCCCCchHHHHHHHHHHH
Q psy12838 390 ------------SRHLPLLQDLICSHQATVLIAGNANDMPTAVREVLVET 427 (494)
Q Consensus 390 ------------~~~~~~l~~~l~~~~~~vYvCGp~~~M~~~V~~~L~~i 427 (494)
+-..+.+.+.+...++.||+||| ++|+++|++.|.+.
T Consensus 336 ~~~~~~~~~~~G~i~~~~l~~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~ 384 (403)
T 1cqx_A 336 EDVQGRDYDYPGLVDVKQIEKSILLPDADYYICGP-IPFMRMQHDALKNL 384 (403)
T ss_dssp TCCBTTTBSEESSCCGGGSHHHHCCTTCEEEEESS-HHHHHHHHHHHHHT
T ss_pred ccccccccCcCCCcCHHHHhhccCCCCCEEEEeCC-HHHHHHHHHHHHHc
Confidence 00112233321223789999999 68999999998764
No 33
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.73 E-value=9.7e-19 Score=170.87 Aligned_cols=161 Identities=15% Similarity=0.127 Sum_probs=112.5
Q ss_pred cChHHHHHHhCC----CCCcccccccCCCCCCCeEEEEEEEEEeecCCCCCccCchhhHhhcCCCCCeEEEEeeCCCccC
Q psy12838 240 VPVEYLFELFSP----IRPRAFSIASSPKTHSGELHLLVAIVKYKTKMLAPRYGLCSNYLAALNPGDSVAISIKRGSFVF 315 (494)
Q Consensus 240 ~~l~~ll~~lp~----~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~Gd~v~i~~p~G~F~l 315 (494)
.|+|++...+|. ...|+|||+|.+. +.++|.|+++. ..|.+|+||+++++||.|.|.+|.|.|.+
T Consensus 40 ~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~---~~~~i~~~~~~--------~~G~~S~~l~~l~~Gd~l~v~gP~G~f~l 108 (252)
T 2gpj_A 40 QESAYIKLLFPQAGERPLMRTYTIRQQRD---DEIDVDFVLHD--------TDGPASSWAKTAQVGELIQIGGPGLKKLI 108 (252)
T ss_dssp CTTCEEEEEECCTTSCCEEEEEECCEEET---TEEEEEEECCS--------SCCHHHHHHHHCCTTCEEEEEEEECCCCC
T ss_pred CCCCeEEEEcccCCCCCCCCceeeeccCC---CEEEEEEEEeC--------CCCcHHHHHhhCCCCCEEEEecCCCCCcC
Confidence 456665444553 4679999999764 57777776542 13899999999999999999999999998
Q ss_pred CCCCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcCCCeE-EEecccccC-h
Q psy12838 316 PKNEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLTF-YVQHVMSRH-L 393 (494)
Q Consensus 316 p~~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~~l~~-yVqd~l~~~-~ 393 (494)
+.+ .++++|||+||||||+++|++++... . .+++++++|+. .|.+. |. ....+++ ++.+.-... +
T Consensus 109 ~~~-~~~~lliagGtGitPi~s~l~~l~~~----~-~~~~~~~~~~~-~d~~~---l~---~~~~~~v~~~~~~~~~~~g 175 (252)
T 2gpj_A 109 NFE-ADWFLLAGDMTALPAISVNLAKLPNN----A-VGYAVIEVLSE-ADIQP---LV---HPEHVELHWVINPEADPEG 175 (252)
T ss_dssp CSS-SSEEEEEEEGGGHHHHHHHHHHSCTT----C-EEEEEEEESSG-GGCCC---CC---CCTEEEEEEEECSSCCTTC
T ss_pred CCC-CceEEEEcchhhHHHHHHHHHhCCCC----C-cEEEEEEECCH-HHhhc---cc---CCCCcEEEEEeCCCCCccc
Confidence 754 57999999999999999999987432 1 34688899987 45432 11 1112222 222111111 3
Q ss_pred hHHHHhhcc-----CCCEEEEeCCCCchHHHHHHHHH
Q psy12838 394 PLLQDLICS-----HQATVLIAGNANDMPTAVREVLV 425 (494)
Q Consensus 394 ~~l~~~l~~-----~~~~vYvCGp~~~M~~~V~~~L~ 425 (494)
..+.+.+.. .+..+|+||| ++|++++++.|.
T Consensus 176 ~~~~~~l~~~~~~~~~~~vy~CGP-~~m~~av~~~l~ 211 (252)
T 2gpj_A 176 RPLVERIAQLPWLAGEPAVWIACE-FNSMRALRRHFK 211 (252)
T ss_dssp HHHHHHHTTSCCCSSCEEEEEEEE-HHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCcEEEEEcC-HHHHHHHHHHHH
Confidence 345555432 2568999999 689999999987
No 34
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.66 E-value=7.1e-17 Score=146.61 Aligned_cols=118 Identities=18% Similarity=0.164 Sum_probs=77.1
Q ss_pred CCCCCe-EEEEeeCCCccCCCCCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHH
Q psy12838 298 LNPGDS-VAISIKRGSFVFPKNEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAI 376 (494)
Q Consensus 298 l~~Gd~-v~i~~p~G~F~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~ 376 (494)
|++||. |.+.+|.|+|.... ..++++|||+||||||++++++++...+. .++|+ |+|+. +|.+|.+||+++.
T Consensus 1 L~~Gd~vl~v~gP~G~~f~~~-~~~~~llIaGG~GItPl~sm~~~l~~~~~----~v~l~-g~r~~-~d~~~~~el~~l~ 73 (158)
T 3lrx_A 1 MKEGDSLLNVAGPLGTPVPME-KFGKILAIGAYTGIVEVYPIAKAWQEIGN----DVTTL-HVTFE-PMVILKEELEKAV 73 (158)
T ss_dssp -----------CCCCCCBCCC-CCSEEEEEEETTHHHHHHHHHHHHHHHTC----EEEEE-EECBG-GGCCSHHHHHHHS
T ss_pred CcCCCEeeEEECCCCCCCccC-CCCeEEEEEccCcHHHHHHHHHHHHhcCC----cEEEE-EeCCH-HHhhHHHHHHHHH
Confidence 578999 59999999765333 47899999999999999999999886543 36788 99999 6999999999875
Q ss_pred HcCCCeEEEeccc------cc-----ChhH----HHHhhcc-CCCEEEEeCCCCchHHHHHHHHHHH
Q psy12838 377 QANQLTFYVQHVM------SR-----HLPL----LQDLICS-HQATVLIAGNANDMPTAVREVLVET 427 (494)
Q Consensus 377 ~~~~l~~yVqd~l------~~-----~~~~----l~~~l~~-~~~~vYvCGp~~~M~~~V~~~L~~i 427 (494)
.+ .++.... .+ .... +.+++.. ....||+||| ++|++++.+.+.+.
T Consensus 74 ~~----~~~~~v~~~~~~~~~~~~~g~~G~v~~~l~~~l~~~~~~~vy~CGP-~~mm~~v~~~l~~~ 135 (158)
T 3lrx_A 74 TR----HIVEPVPLNPNQDFLANMKNVSQRLKEKVRELLESEDWDLVFMVGP-VGDQKQVFEVVKEY 135 (158)
T ss_dssp SE----EEECCBCCCTTSCHHHHHHHHHHHHHHHHHHHHHHSCCSEEEEESC-HHHHHHHHHHHGGG
T ss_pred hc----eEEEEeeccccccCCCCCCCCcccccHHHHHhhccCCCCEEEEECC-HHHHHHHHHHHHHc
Confidence 42 2232110 00 0112 2233322 3568999999 68999998887654
No 35
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.59 E-value=5.5e-16 Score=143.06 Aligned_cols=122 Identities=15% Similarity=0.258 Sum_probs=85.2
Q ss_pred EEEeeCCCccCCCCCCCCEEEEecCCcchhhHHHHHHHHHcC-----CCCCCceEEEEeeecCCcccc-cHHHHHHHHHc
Q psy12838 305 AISIKRGSFVFPKNEERPLIMVGPGTGIAPFRSYIHTRISNQ-----TASAQRLHLFFGCRNQGADFY-FNQEWQNAIQA 378 (494)
Q Consensus 305 ~i~~p~G~F~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~~-----~~~~~~i~Lf~G~R~~~~d~l-y~~el~~~~~~ 378 (494)
.|.+|+|.|.++....+++||||||||||||+++++++.... ......++|+||+|+. .+++ |.++|+++...
T Consensus 2 ~v~GP~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~~~~~~~~v~l~~~~r~~-~~~~w~~~~l~~l~~~ 80 (186)
T 3a1f_A 2 AVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDT-HAFEWFADLLQLLESQ 80 (186)
T ss_dssp CTTSTTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEEESCT-TTTHHHHHHHHHHHHH
T ss_pred eEECCCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEEECCc-chHHHHHHHHHHHHHH
Confidence 467899988765445789999999999999999999988652 1023346899999999 4666 99999998764
Q ss_pred ------C-CCe--EEEecc------------------cc----------cChhHHHH-hhc---cCCCEEEEeCCCCchH
Q psy12838 379 ------N-QLT--FYVQHV------------------MS----------RHLPLLQD-LIC---SHQATVLIAGNANDMP 417 (494)
Q Consensus 379 ------~-~l~--~yVqd~------------------l~----------~~~~~l~~-~l~---~~~~~vYvCGp~~~M~ 417 (494)
. .++ .|+... .. -+.+.+.+ +.. ..+..||+||| ++|+
T Consensus 81 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gR~~~~~~~~~~~~~~~~~~~~v~~CGP-~~m~ 159 (186)
T 3a1f_A 81 MQERNNAGFLSYNIYLTGWDESQANHFAVHHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGP-EALA 159 (186)
T ss_dssp HHHTTCTTSEEEEEEETTC-----------------------CCEEESCCCHHHHHHHHHHHSTTCEEEEEEESC-HHHH
T ss_pred HhhccCCCeEEEEEEEcCCCCCcccceeeccccccccCCCCccccccCCCCHHHHHHHHHHhCCCCcEEEEEeCC-HHHH
Confidence 2 343 455421 00 01122222 221 13578999999 6899
Q ss_pred HHHHHHHHHHH
Q psy12838 418 TAVREVLVETI 428 (494)
Q Consensus 418 ~~V~~~L~~i~ 428 (494)
++|+++|.+..
T Consensus 160 ~~v~~~l~~~g 170 (186)
T 3a1f_A 160 ETLSKQSISNS 170 (186)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhh
Confidence 99999987754
No 36
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.57 E-value=2.4e-15 Score=134.10 Aligned_cols=112 Identities=16% Similarity=0.121 Sum_probs=78.2
Q ss_pred EEEEeeCCCccCCCCCCCCEEEEecCCcchhhHHHHHHHHHcCCCCCCceEEEEeeecCCcccccHHHHHHHHHcCCCeE
Q psy12838 304 VAISIKRGSFVFPKNEERPLIMVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLTF 383 (494)
Q Consensus 304 v~i~~p~G~F~lp~~~~~piImIa~GtGIAPf~s~l~~~~~~~~~~~~~i~Lf~G~R~~~~d~ly~~el~~~~~~~~l~~ 383 (494)
+.|.||.|+|....+ .++++||||||||||++++++++.+.+. .++++ |+|++ +|++|.+||+++... .
T Consensus 3 ~~v~GP~G~~~~~~~-~~~~llIaGG~GiaPl~sm~~~l~~~~~----~v~l~-g~R~~-~~~~~~~el~~l~~~----~ 71 (142)
T 3lyu_A 3 LNVAGPLGTPVPMEK-FGKILAIGAYTGIVEVYPIAKAWQEIGN----DVTTL-HVTFE-PMVILKEELEKAVTR----H 71 (142)
T ss_dssp ----CCCSCCBCCCC-CSEEEEEEETTHHHHHHHHHHHHHHTTC----EEEEE-EEEEG-GGCCSHHHHHTTSSE----E
T ss_pred eeeeCCCCCCccCCC-CCeEEEEECcCcHHHHHHHHHHHHhcCC----cEEEE-EeCCH-HHhhHHHHHHHHHhh----e
Confidence 578999998765543 6899999999999999999999887554 36788 99999 699999999887542 2
Q ss_pred EEeccc------cc-----Ch----hHHHHhhcc-CCCEEEEeCCCCchHHHHHHHHHHH
Q psy12838 384 YVQHVM------SR-----HL----PLLQDLICS-HQATVLIAGNANDMPTAVREVLVET 427 (494)
Q Consensus 384 yVqd~l------~~-----~~----~~l~~~l~~-~~~~vYvCGp~~~M~~~V~~~L~~i 427 (494)
++.... .+ .. +.+.+++.+ ....||+||| +.|+++|.+.+.+.
T Consensus 72 ~~~~~~~~~~~~~~d~~~g~~G~v~~~l~~~~~~~~~~~vy~CGP-~~Mm~av~~~l~~~ 130 (142)
T 3lyu_A 72 IVEPVPLNPNQDFLANMKNVSQRLKEKVRELLESEDWDLVFMVGP-VGDQKQVFEVVKEY 130 (142)
T ss_dssp EEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHSSCCSEEEEESC-HHHHHHHHHHHHHH
T ss_pred EEEEeecccccCCCCCCCCCccchhHHHHHhcccCCCCEEEEECC-HHHHHHHHHHHHHc
Confidence 222110 00 01 123333322 3467999999 68999999988765
No 37
>2ljs_A Trypsin inhibitor 3; beta strand, helix, cyclic backbone, hydrolase inhibitor; HET: PCA; NMR {Momordica cochinchinensis}
Probab=80.07 E-value=0.25 Score=30.01 Aligned_cols=15 Identities=40% Similarity=1.108 Sum_probs=13.6
Q ss_pred ChhhhhhcCCCCCCC
Q psy12838 10 FPQTLDQCKDSSKCP 24 (494)
Q Consensus 10 ~~~~~~~~~~~~~c~ 24 (494)
-|.+.++|+.|+-||
T Consensus 4 cprilkkckrdsdcp 18 (30)
T 2ljs_A 4 CPRILKKCRRDSDCP 18 (30)
T ss_dssp CCCCCCBCSSGGGSS
T ss_pred cHHHHHHhccccCCc
Confidence 488999999999997
No 38
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=71.04 E-value=6.5 Score=39.92 Aligned_cols=47 Identities=19% Similarity=0.376 Sum_probs=40.9
Q ss_pred ceEEEEeeeeeeccCCCCCeEEEEEEeCCC-CccccCCCeeEEccCCC
Q psy12838 77 GYVKEQREEMTVLCEPALADVRHIKLKLPA-TLQYSPGDVLLVHPHNR 123 (494)
Q Consensus 77 g~~~~v~~n~~lt~~~~~~~~~~l~l~~~~-~~~y~~Gd~l~v~P~N~ 123 (494)
.+.++|+++.+++...+..++.+++|+.++ .+.|.||+++.|.+.+.
T Consensus 122 ~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~ 169 (402)
T 2b5o_A 122 PFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGE 169 (402)
T ss_dssp CEEEEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSE
T ss_pred CEEEEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCC
Confidence 467899999999987788899999999886 58999999999988763
No 39
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=60.33 E-value=15 Score=35.55 Aligned_cols=46 Identities=13% Similarity=0.235 Sum_probs=39.1
Q ss_pred ceEEEEeeeeeeccCCCCCeEEEEEEeCCCCccccCCCeeEEccCC
Q psy12838 77 GYVKEQREEMTVLCEPALADVRHIKLKLPATLQYSPGDVLLVHPHN 122 (494)
Q Consensus 77 g~~~~v~~n~~lt~~~~~~~~~~l~l~~~~~~~y~~Gd~l~v~P~N 122 (494)
.+.++|+++.+++..+...++.+++|+.+..+.|.||.++.|.++.
T Consensus 33 ~~~~~V~~~~~l~~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~ 78 (310)
T 3vo2_A 33 PYVGRCLSNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADG 78 (310)
T ss_dssp CEEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSS
T ss_pred CEEEEEEEEEEccCCCCCccEEEEEEeCCCCCcccCCCEEEEECCC
Confidence 3788999999998776667899999997777899999999998754
No 40
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=40.02 E-value=23 Score=34.95 Aligned_cols=27 Identities=15% Similarity=0.236 Sum_probs=23.2
Q ss_pred CCEEEEecCCc--chhhHHHHHHHHHcCC
Q psy12838 321 RPLIMVGPGTG--IAPFRSYIHTRISNQT 347 (494)
Q Consensus 321 ~piImIa~GtG--IAPf~s~l~~~~~~~~ 347 (494)
+.|++.||||| |-|.+++.+++.+++.
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~ 31 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGY 31 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTC
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCC
Confidence 46889999997 8899999999988765
No 41
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=35.07 E-value=65 Score=30.77 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=36.4
Q ss_pred eEEEEeeeeeeccCCCCCeEEEEEEeCCCCccccCCCeeEEccCC
Q psy12838 78 YVKEQREEMTVLCEPALADVRHIKLKLPATLQYSPGDVLLVHPHN 122 (494)
Q Consensus 78 ~~~~v~~n~~lt~~~~~~~~~~l~l~~~~~~~y~~Gd~l~v~P~N 122 (494)
+..+|++...++..+...++..++|+.+..+.|.||.++.|..+.
T Consensus 29 ~~~~V~~~~~~t~~~~~~~v~~~~l~~~~~~~~~pGQ~v~l~~~~ 73 (311)
T 3lo8_A 29 FTATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPG 73 (311)
T ss_dssp EEEEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTCEEEEECSS
T ss_pred eEEEEEeeEeccCCCCCCccEEEEEeCCCCCcccCCCEEEEeCCC
Confidence 566788888887555557899999998878899999999997654
No 42
>1mct_I Trypsin inhibitor A; complex(proteinase/inhibitor); 1.60A {Momordica charantia} SCOP: g.3.2.1 PDB: 1f2s_I
Probab=22.97 E-value=12 Score=22.73 Aligned_cols=14 Identities=29% Similarity=0.717 Sum_probs=12.4
Q ss_pred hhhhhhcCCCCCCC
Q psy12838 11 PQTLDQCKDSSKCP 24 (494)
Q Consensus 11 ~~~~~~~~~~~~c~ 24 (494)
|.+..+|+.|+-|.
T Consensus 4 PrIlm~Ck~DsDCl 17 (28)
T 1mct_I 4 PRIWMECTRDSDCM 17 (28)
T ss_dssp ECCCCBCSSGGGSS
T ss_pred chhhhhcccccccc
Confidence 77889999999995
No 43
>1h9h_I EETI-II, trypsin inhibitor II; hydrolase inhibitor, complex (serine protease/inhibitor), squash inhibitor, cystine knot, hydrolase; 1.5A {Ecballium elaterium} SCOP: g.3.2.1 PDB: 1mcv_I
Probab=22.05 E-value=13 Score=23.74 Aligned_cols=14 Identities=43% Similarity=0.909 Sum_probs=12.4
Q ss_pred hhhhhhcCCCCCCC
Q psy12838 11 PQTLDQCKDSSKCP 24 (494)
Q Consensus 11 ~~~~~~~~~~~~c~ 24 (494)
|++..+|+.|+-|+
T Consensus 3 PRILm~CK~DsDCl 16 (36)
T 1h9h_I 3 PRILIRCKQDSDCL 16 (36)
T ss_dssp ECCCCBCSSGGGSC
T ss_pred chhhcccccccCcc
Confidence 77889999999995
No 44
>1lu0_A CMTI-I, trypsin inhibitor I; serine protease inhibitor, metal coordination, hydrolase INH; 1.03A {Cucurbita maxima} SCOP: g.3.2.1 PDB: 2v1v_A 1cti_A 1ppe_I 2cti_A 2sta_I 3cti_A 2btc_I 2stb_I 2eti_A 2it7_A
Probab=21.87 E-value=14 Score=22.69 Aligned_cols=15 Identities=40% Similarity=0.822 Sum_probs=12.9
Q ss_pred ChhhhhhcCCCCCCC
Q psy12838 10 FPQTLDQCKDSSKCP 24 (494)
Q Consensus 10 ~~~~~~~~~~~~~c~ 24 (494)
=|.+..+|+.|+-|.
T Consensus 3 CPrIlm~CK~DsDCl 17 (29)
T 1lu0_A 3 CPRILLECKKDSDCL 17 (29)
T ss_dssp CCSCCCBCSSGGGSC
T ss_pred Cchhhhhcccccccc
Confidence 378889999999995
No 45
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=20.19 E-value=4.6e+02 Score=26.32 Aligned_cols=16 Identities=19% Similarity=0.391 Sum_probs=12.6
Q ss_pred CCCCEEEEecCCcchh
Q psy12838 319 EERPLIMVGPGTGIAP 334 (494)
Q Consensus 319 ~~~piImIa~GtGIAP 334 (494)
+.+++|+|+.||..+.
T Consensus 269 ~~~~vv~vs~GS~~~~ 284 (456)
T 2c1x_A 269 KPTSVVYISFGTVTTP 284 (456)
T ss_dssp CTTCEEEEECCSSCCC
T ss_pred CCcceEEEecCccccC
Confidence 4678999999996653
Done!