BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12843
(103 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
pdb|4DQL|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
Length = 393
Score = 68.9 bits (167), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTG+APFR ++ R + Q S HL+FGCR+ D+ + +E +NA +T
Sbjct: 245 MVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQEELENAQSEGIIT 304
Query: 59 LYTAFSR 65
L+TAFSR
Sbjct: 305 LHTAFSR 311
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
pdb|4DQK|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
Length = 391
Score = 68.6 bits (166), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTG+APFR ++ R + Q S HL+FGCR+ D+ + +E +NA +T
Sbjct: 243 MVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQEELENAQSEGIIT 302
Query: 59 LYTAFSR 65
L+TAFSR
Sbjct: 303 LHTAFSR 309
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60
pdb|1DDG|B Chain B, Crystal Structure Of Sir-Fp60
pdb|1DDI|A Chain A, Crystal Structure Of Sir-Fp60
Length = 374
Score = 59.7 bits (143), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT-L 59
M+GPGTGIAPFR+++ R +++ LFFG + DF + EWQ ++ LT +
Sbjct: 232 MIGPGTGIAPFRAFMQQRAADEAPGKN--WLFFGNPHFTEDFLYQVEWQRYVKEGVLTRI 289
Query: 60 YTAFSRDQEEKI 71
A+SRDQ+EK+
Sbjct: 290 DLAWSRDQKEKV 301
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
pdb|1AMO|B Chain B, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
Length = 615
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTGIAPF +I R + Q L++GCR D+ + +E + LT
Sbjct: 467 MVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALT 526
Query: 59 -LYTAFSRDQEEKI 71
L AFSR+Q K+
Sbjct: 527 QLNVAFSREQAHKV 540
>pdb|1J9Z|A Chain A, Cypor-W677g
pdb|1J9Z|B Chain B, Cypor-W677g
Length = 622
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTGIAPF +I R + Q L++GCR D+ + +E + LT
Sbjct: 474 MVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALT 533
Query: 59 -LYTAFSRDQEEKI 71
L AFSR+Q K+
Sbjct: 534 QLNVAFSREQAHKV 547
>pdb|1JA0|A Chain A, Cypor-W677x
pdb|1JA0|B Chain B, Cypor-W677x
Length = 620
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTGIAPF +I R + Q L++GCR D+ + +E + LT
Sbjct: 474 MVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALT 533
Query: 59 -LYTAFSRDQEEKI 71
L AFSR+Q K+
Sbjct: 534 QLNVAFSREQAHKV 547
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|B Chain B, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|C Chain C, Nadph-Cytochrome P450 Reductase In An Open Conformation
Length = 618
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTGIAPF +I R + Q L++GCR D+ + +E + LT
Sbjct: 470 MVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALT 529
Query: 59 -LYTAFSRDQEEKI 71
L AFSR+Q K+
Sbjct: 530 QLNVAFSREQAHKV 543
>pdb|1JA1|A Chain A, Cypor-Triple Mutant
pdb|1JA1|B Chain B, Cypor-Triple Mutant
Length = 622
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTGIAPF +I R + Q L++GCR D+ + +E + LT
Sbjct: 474 MVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALT 533
Query: 59 -LYTAFSRDQEEKI 71
L AFSR+Q K+
Sbjct: 534 QLNVAFSREQAHKV 547
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH DOMAIN And R457h Mutant)
Length = 458
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTG+APF +I R + Q L++GCR D+ + +E + LT
Sbjct: 311 MVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALT 370
Query: 59 -LYTAFSRDQEEKI 71
L AFSR+Q K+
Sbjct: 371 QLNVAFSREQSHKV 384
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr
Length = 637
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTG+APF +I R + Q L++GCR D+ + +E + LT
Sbjct: 490 MVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALT 549
Query: 59 -LYTAFSRDQEEKI 71
L AFSR+Q K+
Sbjct: 550 QLNVAFSREQSHKV 563
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH Domain)
Length = 458
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTG+APF +I R + Q L++GCR D+ + +E + LT
Sbjct: 311 MVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALT 370
Query: 59 -LYTAFSRDQEEKI 71
L AFSR+Q K+
Sbjct: 371 QLNVAFSREQSHKV 384
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
pdb|3QFR|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
Length = 618
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTG+APF +I R + Q L++GCR D+ + +E + LT
Sbjct: 471 MVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALT 530
Query: 59 -LYTAFSRDQEEKI 71
L AFSR+Q K+
Sbjct: 531 QLNVAFSREQSHKV 544
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
pdb|3QFC|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
Length = 618
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTG+APF +I R + Q L++GCR D+ + +E + LT
Sbjct: 471 MVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALT 530
Query: 59 -LYTAFSRDQEEKI 71
L AFSR+Q K+
Sbjct: 531 QLNVAFSREQSHKV 544
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
pdb|3QE2|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
Length = 618
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTG+APF +I R + Q L++GCR D+ + +E + LT
Sbjct: 471 MVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALT 530
Query: 59 -LYTAFSRDQEEKI 71
L AFSR+Q K+
Sbjct: 531 QLNVAFSREQSHKV 544
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing
Fnr-Like Module Of Human Methionine Synthase Reductase
Length = 539
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQ----RLHLFFGCRNQGADFYFNQEWQNAIQANQ 56
MVGPGTGIAPF ++ R Q + LFFGCR++ D+ F +E ++ ++
Sbjct: 383 MVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRKELRHFLKHGI 442
Query: 57 LT-LYTAFSRD 66
LT L +FSRD
Sbjct: 443 LTHLKVSFSRD 453
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of
Human Methionine Synthase Reductase
Length = 539
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQ----RLHLFFGCRNQGADFYFNQEWQNAIQANQ 56
MVGPGTGIAPF ++ R Q + LFFGCR++ D+ F +E ++ ++
Sbjct: 383 MVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRKELRHFLKHGI 442
Query: 57 LT-LYTAFSRD 66
LT L +FSRD
Sbjct: 443 LTHLKVSFSRD 453
>pdb|3OJW|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
Length = 622
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 1 MVGPGTGIAPFRSYIHTR--ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLT 58
MVGPGTGIAPF +I R + Q L++G R D+ + +E + LT
Sbjct: 474 MVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGARRSDEDYLYREELARFHKDGALT 533
Query: 59 -LYTAFSRDQEEKI 71
L AFSR+Q K+
Sbjct: 534 QLNVAFSREQAHKV 547
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution.
pdb|1TLL|B Chain B, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution
Length = 688
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 1 MVGPGTGIAPFRSYIHTR---ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQL 57
+VGPGTGIAPFRS+ R I ++ + + L FGCR D + +E A
Sbjct: 505 LVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVF 564
Query: 58 -TLYTAFSR--DQEEKITNNLSFESRVEA 83
LYTA+SR D+ +K ++ E E+
Sbjct: 565 RELYTAYSREPDRPKKYVQDVLQEQLAES 593
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
FadNADP+ Domain At 1.9a Resolution
Length = 435
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 1 MVGPGTGIAPFRSYIHTR---ISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQL 57
+VGPGTGIAPFRS+ R I ++ + + L FGCR D + +E A
Sbjct: 284 LVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVF 343
Query: 58 -TLYTAFSR--DQEEKITNNLSFESRVEA 83
LYTA+SR D+ +K ++ E E+
Sbjct: 344 RELYTAYSREPDRPKKYVQDVLQEQLAES 372
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BF4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BN4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
pdb|2BN4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
Length = 682
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
Query: 1 MVGPGTGIAPFRSYIHTRIS--------NQTASAQRLHLFFGCRNQGADFYFNQEW 48
M+GPGTG+APFR +I R++ S + LF+G RN DF + EW
Sbjct: 529 MIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFYGSRNTD-DFLYQDEW 583
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a.
pdb|2BPO|B Chain B, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a
Length = 682
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
Query: 1 MVGPGTGIAPFRSYIHTRIS--------NQTASAQRLHLFFGCRNQGADFYFNQEW 48
M+GPGTG+APFR +I R++ S + LF+G RN DF + EW
Sbjct: 529 MIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFYGSRNTD-DFLYQDEW 583
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+
Reductase From Maize Root At 1.05 Angstroms
Length = 311
Score = 32.3 bits (72), Expect = 0.071, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH----LFFGCRNQGADFYFNQEWQNAIQ--A 54
M+ GTG+APFR Y+ R+ + R LF G N + Y ++E+ + ++
Sbjct: 165 MIATGTGVAPFRGYLR-RMFMEDVPNYRFGGLAWLFLGVANSDSLLY-DEEFTSYLKQYP 222
Query: 55 NQLTLYTAFSRDQEEKITNNLSFESRVE 82
+ A SR+Q+ + + + ++E
Sbjct: 223 DNFRYDKALSREQKNRSGGKMYVQDKIE 250
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms - Test Set Withheld
Length = 311
Score = 32.3 bits (72), Expect = 0.074, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH----LFFGCRNQGADFYFNQEWQNAIQ--A 54
M+ GTG+APFR Y+ R+ + R LF G N + Y ++E+ + ++
Sbjct: 165 MIATGTGVAPFRGYLR-RMFMEDVPNYRFGGLAWLFLGVANSDSLLY-DEEFTSYLKQYP 222
Query: 55 NQLTLYTAFSRDQEEKITNNLSFESRVE 82
+ A SR+Q+ + + + ++E
Sbjct: 223 DNFRYDKALSREQKNRSGGKMYVQDKIE 250
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms
Length = 316
Score = 32.0 bits (71), Expect = 0.083, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH----LFFGCRNQGADFYFNQEWQNAIQ--A 54
M+ GTG+APFR Y+ R+ + R LF G N + Y ++E+ + ++
Sbjct: 170 MIATGTGVAPFRGYLR-RMFMEDVPNYRFGGLAWLFLGVANSDSLLY-DEEFTSYLKQYP 227
Query: 55 NQLTLYTAFSRDQEEKITNNLSFESRVE 82
+ A SR+Q+ + + + ++E
Sbjct: 228 DNFRYDKALSREQKNRSGGKMYVQDKIE 255
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312q
Length = 314
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 167 MLGTGTGIAPFRSFL 181
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of
Ferredoxin-Nadp+ Reductase: Structure-Function
Relationship As Studied By Site-Directed Mutagenesis And
X- Ray Crystallography
Length = 314
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 167 MLGTGTGIAPFRSFL 181
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312l
Length = 314
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 167 MLGTGTGIAPFRSFL 181
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FNC|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FND|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
Length = 314
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 167 MLGTGTGIAPFRSFL 181
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
pdb|2XNC|B Chain B, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
Length = 315
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 167 MLGTGTGIAPFRSFL 181
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312a
Length = 314
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 167 MLGTGTGIAPFRSFL 181
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase
pdb|2B5O|B Chain B, Ferredoxin-nadp Reductase
Length = 402
Score = 30.4 bits (67), Expect = 0.29, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQ---RLHLFFGCRNQGADFYFNQ-EWQNAIQANQ 56
M+ GTGIAPFR+++ Q + + L FG Y + E A +
Sbjct: 255 MLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTANILYKDDFEKMAAENPDN 314
Query: 57 LTLYTAFSRDQEEKITNNLSFESRV 81
L A SR+Q+ + +SRV
Sbjct: 315 FRLTYAISREQKTADGGKVYVQSRV 339
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
pdb|1SM4|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
Length = 296
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 149 MLGTGTGIAPFRSFL 163
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid
pdb|3MHP|B Chain B, Fnr-Recruitment To The Thylakoid
Length = 296
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 148 MLGTGTGIAPFRSFL 162
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFY|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFZ|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadph
pdb|1QFZ|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadph
Length = 308
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 161 MLGTGTGIAPFRSFL 175
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+
pdb|1QGA|B Chain B, Pea Fnr Y308w Mutant In Complex With Nadp+
Length = 308
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 161 MLGTGTGIAPFRSFL 175
>pdb|1QG0|A Chain A, Wild-type Pea Fnr
pdb|1QG0|B Chain B, Wild-type Pea Fnr
Length = 308
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 161 MLGTGTGIAPFRSFL 175
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant
pdb|4AF7|B Chain B, Pea Fnr C266m Mutant
Length = 308
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 161 MLGTGTGIAPFRSFL 175
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant
pdb|4AF6|B Chain B, Pea Fnr L268v Mutant
Length = 308
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 1 MVGPGTGIAPFRSYI 15
M+G GTGIAPFRS++
Sbjct: 161 MLGTGTGIAPFRSFL 175
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
pdb|3VO2|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
Length = 310
Score = 28.9 bits (63), Expect = 0.69, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQ---RLHLFFGCRNQGADFYFNQ-EWQNAIQANQ 56
M+ GTGIAPFRS++ + + LF G + Y + E + +
Sbjct: 163 MLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEMAPDN 222
Query: 57 LTLYTAFSRDQEEKITNNLSFESRV----EAKIPYLGWDSTYIIL 97
L A SR+Q + ++R+ E L D+TY+ +
Sbjct: 223 FRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYVYM 267
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
pdb|3VO1|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
Length = 314
Score = 28.9 bits (63), Expect = 0.71, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH---LFFGCRNQGADFYFNQ-EWQNAIQANQ 56
M+ GTGIAPFRS++ + + LF G Y + E + +
Sbjct: 167 MLATGTGIAPFRSFLWKMFFEEHEDYKYTGLAWLFLGVPTSDTLLYKEELEKMKEMAPDN 226
Query: 57 LTLYTAFSRDQEEKITNNLSFESRV----EAKIPYLGWDSTYIIL 97
L A SR+Q + ++R+ E L D+TY+ +
Sbjct: 227 FRLDFAVSREQTNAAGEKMYIQTRMAEYKEELWELLKKDNTYVYM 271
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAQ|C Chain C, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAW|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
pdb|1GAW|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
Length = 314
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 1 MVGPGTGIAPFRSYI 15
M+ GTGIAPFRS++
Sbjct: 167 MLATGTGIAPFRSFL 181
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 144 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 202
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 203 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 232
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 144 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 202
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 203 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 232
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 144 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 202
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 203 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 232
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 144 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 202
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 203 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 232
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 211
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 212 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 241
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 144 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 202
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 203 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 232
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 211
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 212 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 241
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 211
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 212 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 241
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 152 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 210
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 211 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 240
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 211
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 212 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 241
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 211
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 212 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 241
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 144 MLAGGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 202
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 203 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 232
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 211
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 212 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 241
>pdb|1KRH|A Chain A, X-Ray Stucture Of Benzoate Dioxygenase Reductase
pdb|1KRH|B Chain B, X-Ray Stucture Of Benzoate Dioxygenase Reductase
Length = 338
Score = 26.6 bits (57), Expect = 3.9, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFG 34
M+ GTGIAPF S + ++ Q S + L FG
Sbjct: 215 MLAGGTGIAPFLSML--QVLEQKGSEHPVRLVFG 246
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 152 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 210
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 211 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 240
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 152 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 210
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 211 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 240
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 211
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 212 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 241
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 152 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 210
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 211 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 240
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 211
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 212 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 241
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 152 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 210
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 211 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 240
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 153 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 211
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 212 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 241
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLH-------LFFGCRNQGADFYFNQEWQNAIQ 53
M+ GTGIAP R+Y+ + +A + L FG + + +E + Q
Sbjct: 152 MLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTT-PNILYKEELEEIQQ 210
Query: 54 --ANQLTLYTAFSRDQEEKITNNLSFESRV 81
+ L A SR+Q+ + + RV
Sbjct: 211 KYPDNFRLTYAISREQKNPQGGRMYIQDRV 240
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,040,895
Number of Sequences: 62578
Number of extensions: 99329
Number of successful extensions: 219
Number of sequences better than 100.0: 63
Number of HSP's better than 100.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 141
Number of HSP's gapped (non-prelim): 63
length of query: 103
length of database: 14,973,337
effective HSP length: 68
effective length of query: 35
effective length of database: 10,718,033
effective search space: 375131155
effective search space used: 375131155
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)