Query psy12843
Match_columns 103
No_of_seqs 190 out of 1067
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 21:12:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12843.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12843hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ddg_A Sulfite reductase (NADP 99.9 2.6E-25 8.8E-30 160.9 8.6 98 1-101 232-330 (374)
2 2qtl_A MSR;, methionine syntha 99.9 8.9E-25 3.1E-29 164.2 10.1 99 1-101 383-494 (539)
3 3qfs_A CPR, P450R, NADPH--cyto 99.9 1.1E-24 3.6E-29 161.2 9.5 99 1-102 311-414 (458)
4 3qe2_A CPR, P450R, NADPH--cyto 99.9 2.3E-24 7.8E-29 164.1 8.5 98 1-101 471-573 (618)
5 1f20_A Nitric-oxide synthase; 99.9 6.8E-24 2.3E-28 156.0 9.8 99 1-101 284-390 (435)
6 4dql_A Bifunctional P-450/NADP 99.9 1.1E-23 3.8E-28 153.3 10.8 98 1-101 245-347 (393)
7 2bpo_A CPR, P450R, NADPH-cytoc 99.9 5.9E-24 2E-28 163.3 8.4 96 1-100 529-637 (682)
8 3vo2_A Putative uncharacterize 99.9 1.6E-23 5.4E-28 147.6 9.8 101 1-102 163-272 (310)
9 3jqq_A Ferredoxin NADP reducta 99.9 1E-23 3.5E-28 149.3 8.8 99 1-102 175-288 (316)
10 1tll_A Nitric-oxide synthase, 99.9 5.6E-23 1.9E-27 158.0 9.0 99 1-101 505-611 (688)
11 1fnb_A Ferredoxin-NADP+ reduct 99.9 1.2E-22 4.2E-27 143.1 10.1 99 1-102 167-276 (314)
12 2bmw_A Ferredoxin--NADP reduct 99.9 1.1E-22 3.7E-27 142.6 9.6 99 1-102 153-266 (304)
13 2b5o_A FNR, ferredoxin--NADP r 99.9 1.2E-22 4.2E-27 147.9 9.5 101 1-102 255-364 (402)
14 3lo8_A Ferredoxin--NADP reduct 99.9 2.9E-22 9.9E-27 141.0 8.2 100 1-102 165-273 (311)
15 2rc5_A Ferredoxin-NADP reducta 99.9 7.5E-22 2.6E-26 139.0 9.2 98 1-102 170-276 (314)
16 1qfj_A Protein (flavin reducta 99.8 9.1E-21 3.1E-25 128.1 9.0 92 1-101 107-203 (232)
17 2r6h_A NADH:ubiquinone oxidore 99.8 3E-20 1E-24 129.2 9.1 96 1-101 161-264 (290)
18 1tvc_A Methane monooxygenase c 99.8 2.3E-20 7.7E-25 127.6 8.3 93 1-101 122-219 (250)
19 1fdr_A Flavodoxin reductase; f 99.8 5E-20 1.7E-24 125.5 8.3 98 1-101 111-215 (248)
20 1krh_A Benzoate 1,2-dioxygenas 99.8 7.3E-20 2.5E-24 129.9 7.5 92 1-101 215-310 (338)
21 1umk_A B5R, NADH-cytochrome B5 99.8 2.3E-19 7.9E-24 123.9 8.5 94 1-101 151-251 (275)
22 2eix_A NADH-cytochrome B5 redu 99.8 1.8E-19 6.2E-24 122.4 7.4 91 1-101 121-220 (243)
23 2bgi_A Ferredoxin-NADP(H) redu 99.8 2.1E-19 7.1E-24 124.4 7.8 98 1-101 125-235 (272)
24 2qdx_A Ferredoxin reductase; o 99.8 1.3E-19 4.3E-24 124.3 5.5 98 1-101 111-221 (257)
25 3a1f_A Cytochrome B-245 heavy 99.8 8.1E-19 2.8E-23 114.4 6.9 63 1-66 22-99 (186)
26 1gvh_A Flavohemoprotein; oxido 99.8 1.2E-18 4.1E-23 125.9 8.4 92 1-101 264-365 (396)
27 4eh1_A Flavohemoprotein; struc 99.8 7.8E-19 2.7E-23 119.2 6.8 89 1-101 119-210 (243)
28 2cnd_A NADH-dependent nitrate 99.8 1.1E-18 3.7E-23 120.2 7.6 94 1-101 141-245 (270)
29 4g1v_A Flavohemoglobin; three 99.8 2.5E-18 8.6E-23 124.5 9.1 88 1-101 277-365 (399)
30 4fk8_A Ferredoxin--NADP reduct 99.8 1.2E-19 4E-24 125.3 1.5 98 1-101 127-237 (271)
31 3lyu_A Putative hydrogenase; t 99.7 1.7E-18 5.8E-23 110.3 5.8 87 1-101 23-117 (142)
32 1cqx_A Flavohemoprotein; globi 99.7 2.2E-18 7.5E-23 124.8 7.1 91 1-101 271-371 (403)
33 3lrx_A Putative hydrogenase; a 99.7 1.3E-18 4.3E-23 112.6 4.8 87 1-101 28-122 (158)
34 1ep3_B Dihydroorotate dehydrog 99.7 6.5E-17 2.2E-21 111.3 6.5 84 1-101 115-200 (262)
35 2pia_A Phthalate dioxygenase r 99.7 1.4E-16 4.8E-21 112.7 7.4 86 1-101 116-202 (321)
36 2gpj_A Siderophore-interacting 99.2 4.3E-11 1.5E-15 82.0 5.9 82 1-101 117-200 (252)
37 3s2u_A UDP-N-acetylglucosamine 74.0 2.3 7.8E-05 29.8 2.8 21 2-22 8-30 (365)
38 3r4v_A Putative uncharacterize 46.5 4.9 0.00017 28.3 0.4 11 3-13 93-103 (315)
39 3kj0_B BCL-2-like protein 11; 41.9 12 0.00043 16.2 1.2 17 5-21 1-17 (27)
40 2dnf_A Doublecortin domain-con 40.1 12 0.00041 22.0 1.3 11 92-102 79-89 (108)
41 2l82_A Designed protein OR32; 38.1 62 0.0021 19.4 4.3 37 44-82 64-101 (162)
42 3arc_H Photosystem II reaction 37.0 28 0.00095 18.6 2.3 18 2-19 20-37 (65)
43 2q7x_A UPF0052 protein SP_1565 31.2 25 0.00085 24.8 2.0 17 2-18 10-26 (326)
44 2p0y_A Hypothetical protein LP 31.0 24 0.00083 25.0 1.9 18 1-18 15-32 (341)
45 3qrx_B Melittin; calcium-bindi 29.6 35 0.0012 14.6 1.6 13 6-18 11-23 (26)
46 2fhw_B Relaxin 3 (prorelaxin H 27.9 2.5 8.4E-05 18.9 -2.4 8 94-101 18-25 (27)
47 1mg4_A Doublecortin, doublecor 27.5 31 0.0011 20.4 1.7 12 91-102 83-94 (113)
48 4ehx_A Tetraacyldisaccharide 4 26.9 38 0.0013 23.5 2.3 19 2-20 45-63 (315)
49 2r75_1 Cell division protein F 25.4 21 0.00073 25.1 0.8 12 3-14 104-115 (338)
50 4fuu_A Leucine aminopeptidase; 25.3 55 0.0019 22.2 2.9 28 5-34 129-156 (309)
51 4h62_V Mediator of RNA polymer 23.8 17 0.00057 16.1 0.0 8 4-11 2-9 (31)
52 1ofu_A FTSZ, cell division pro 22.8 19 0.00065 25.2 0.1 11 3-13 108-118 (320)
53 4dxd_A Cell division protein F 22.8 19 0.00065 26.2 0.1 11 3-13 114-124 (396)
54 3v3t_A Cell division GTPase FT 22.1 19 0.00066 25.8 0.1 11 3-13 101-111 (360)
55 1w5f_A Cell division protein F 21.6 21 0.00071 25.4 0.1 10 3-12 118-127 (353)
56 2btq_B Tubulin btubb; structur 21.3 31 0.0011 25.0 1.0 9 4-12 144-152 (426)
57 2vxy_A FTSZ, cell division pro 21.1 21 0.00073 25.7 0.1 11 3-13 108-118 (382)
No 1
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=99.92 E-value=2.6e-25 Score=160.92 Aligned_cols=98 Identities=31% Similarity=0.549 Sum_probs=85.5
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCCCccchhHHHhh
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQEEKITNNLSFES 79 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~~~g~v~~~l~~ 79 (103)
|||||||||||+||++++..++..++ ++||||+|+.++|++|.+||++|.++ ..+++++++|++++.++|||+++.+
T Consensus 232 mIa~GtGIAP~~s~l~~~~~~~~~~~--~~L~~G~R~~~~d~ly~~El~~~~~~~~~~~l~~a~Srd~~~k~yVq~~l~~ 309 (374)
T 1ddg_A 232 MIGPGTGIAPFRAFMQQRAADEAPGK--NWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLRE 309 (374)
T ss_dssp EECCGGGGHHHHHHHHHHHHHTCCSC--EEEEEEESCHHHHCTTHHHHHHHHHTTSCCEEEEEETTSSSSCCCHHHHHHH
T ss_pred EEECCccHHHHHHHHHHHHhcCCCCC--EEEEEEeCCchhhhhHHHHHHHHHHhCCCcEEEEEEecCCCCCccHHHHHHH
Confidence 79999999999999999987665555 99999999962489999999999887 5678999999988779999999998
Q ss_pred cHHhhccccCCCCcEEEEeecC
Q psy12843 80 RVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 80 ~~~~l~~~l~~~~~~~yvcg~p 101 (103)
+.+.++.++. +++++||||.|
T Consensus 310 ~~~~l~~~l~-~~~~vYvCG~p 330 (374)
T 1ddg_A 310 QGAELWRWIN-DGAHIYVCGDA 330 (374)
T ss_dssp THHHHHHHHH-TTCEEEEEECT
T ss_pred hHHHHHHHHh-CCcEEEEECCC
Confidence 8888888775 58999999954
No 2
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=99.92 E-value=8.9e-25 Score=164.24 Aligned_cols=99 Identities=30% Similarity=0.459 Sum_probs=84.8
Q ss_pred CccccccHHHHHHHHHHHHhcc------cCCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCC-----
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQ------TASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQE----- 68 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~------~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~----- 68 (103)
|||||||||||+||++++.... ..++ ++||||+|+.+.|++|.+||++|.+. ..+++++++||+++
T Consensus 383 mIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~--v~LffG~R~~~~D~ly~dEL~~~~~~g~~~~l~~afSRd~~~~~~~ 460 (539)
T 2qtl_A 383 MVGPGTGIAPFIGFLQHREKLQEQHPDGNFGA--MWLFFGCRHKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEE 460 (539)
T ss_dssp EECCGGGGHHHHHHHHHHHHHHHHCTTCCCCC--EEEEEEESCTTTCCTTHHHHHHHHHTTSSCEEEEEESSSCC-----
T ss_pred EEEcCccHHHHHHHHHHHHHHHhccccCCCCC--EEEEEEECCcchhhHHHHHHHHHHHhCCCcEEEEEEccCCCccccC
Confidence 7999999999999999965422 2344 99999999984599999999999987 56789999999875
Q ss_pred -CccchhHHHhhcHHhhccccCCCCcEEEEeecC
Q psy12843 69 -EKITNNLSFESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 69 -~~g~v~~~l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
.++|||+.|.+..+.++.++..++++|||||++
T Consensus 461 g~k~yVqd~l~e~~~~l~~~l~~~~a~vYVCGp~ 494 (539)
T 2qtl_A 461 APAKYVQDNIQLHGQQVARILLQENGHIYVCGDA 494 (539)
T ss_dssp -CCCSHHHHHHHTHHHHHHHHHHSCCEEEEEESC
T ss_pred CCccchhHHHHHhHHHHHHhhccCCcEEEEECCC
Confidence 689999999998888888885568999999986
No 3
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=99.91 E-value=1.1e-24 Score=161.22 Aligned_cols=99 Identities=27% Similarity=0.464 Sum_probs=84.4
Q ss_pred CccccccHHHHHHHHHHHHh---cc-cCCCceEEEEEeeccCCCccccHHHHHHHHhCCC-eEEEEEEeCCCCCccchhH
Q psy12843 1 MVGPGTGIAPFRSYIHTRIS---NQ-TASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQ-LTLYTAFSRDQEEKITNNL 75 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~---~~-~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~~~-~~~~~~~s~~~~~~g~v~~ 75 (103)
|||||||||||+||++++.. ++ ..++ ++||||+|+.+.|++|.+||++|++++. +++++++||+++.++|||+
T Consensus 311 mIggGTGIAPfrs~lq~r~~l~~~g~~~~~--~~Lf~G~R~~~~D~ly~dEl~~l~~~g~l~~l~~a~SRd~~~k~yVqd 388 (458)
T 3qfs_A 311 MVGPGTGVAPFIGFIQERAWLRQQGKEVGE--TLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKVYVQH 388 (458)
T ss_dssp EECCGGGGHHHHHHHHHHHHHHHHTCCCCC--EEEEEEESCTTTSCTTHHHHHHHHHHTSSSEEEEEETTSSSSCCCHHH
T ss_pred EEcCCcchhhHHHHHHHHHHHHhcCCCCCC--EEEEEEeCCchHhhhHHHHHHHHHHcCCCCEEEEEEECCCCCcccHhH
Confidence 79999999999999998642 22 2344 9999999995369999999999998754 4899999999888999999
Q ss_pred HHhhcHHhhccccCCCCcEEEEeecCC
Q psy12843 76 SFESRVEAKIPYLGWDSTYIILIIRPE 102 (103)
Q Consensus 76 ~l~~~~~~l~~~l~~~~~~~yvcg~p~ 102 (103)
.+.++.+.++.++ ..+++|||||+|.
T Consensus 389 ~l~~~~~~l~~~l-~~~~~vYvCGp~~ 414 (458)
T 3qfs_A 389 LLKQDREHLWKLI-EGGAHIYVCGDAR 414 (458)
T ss_dssp HHHHTHHHHHHHH-HTTCEEEEEEETT
T ss_pred HHHHhHHHHHHHh-cCCCEEEEECCCH
Confidence 9999888888888 4689999999973
No 4
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=99.90 E-value=2.3e-24 Score=164.10 Aligned_cols=98 Identities=29% Similarity=0.481 Sum_probs=85.2
Q ss_pred CccccccHHHHHHHHHHHHhccc----CCCceEEEEEeeccCCCccccHHHHHHHHhCCCe-EEEEEEeCCCCCccchhH
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQT----ASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQL-TLYTAFSRDQEEKITNNL 75 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~----~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~~~~-~~~~~~s~~~~~~g~v~~ 75 (103)
|||||||||||+||+++++.... .++ ++||||+|+.+.|++|.+||++|.+++.+ ++++++||+++.++|||+
T Consensus 471 mIg~GtGIAPfrs~l~~r~~~~~~g~~~~~--~~L~~G~R~~~~D~ly~~el~~~~~~g~l~~l~~a~Srd~~~k~yVqd 548 (618)
T 3qe2_A 471 MVGPGTGVAPFIGFIQERAWLRQQGKEVGE--TLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKVYVQH 548 (618)
T ss_dssp EECCGGGGHHHHHHHHHHHHHHHTTCCCCC--EEEEEEESCTTTSCTTHHHHHHHHHHTSSSEEEEEETTSSSSCCCHHH
T ss_pred EEcCCcchhhHHHHHHHHHHHHhcCCCCCC--EEEEEecCCCccccchHHHHHHHHhcCCCcEEEEEEcCCCCCCCcHHH
Confidence 79999999999999999875321 244 99999999984499999999999887655 899999999878999999
Q ss_pred HHhhcHHhhccccCCCCcEEEEeecC
Q psy12843 76 SFESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 76 ~l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
.+.++.+.++.++ .++++|||||++
T Consensus 549 ~l~~~~~~l~~~l-~~~a~vYvCGp~ 573 (618)
T 3qe2_A 549 LLKQDREHLWKLI-EGGAHIYVCGDA 573 (618)
T ss_dssp HHHHTHHHHHHHH-HHTCEEEEEEET
T ss_pred HHHHhHHHHHHHH-hCCcEEEEECCc
Confidence 9999888888888 578999999986
No 5
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=99.90 E-value=6.8e-24 Score=155.98 Aligned_cols=99 Identities=31% Similarity=0.446 Sum_probs=82.5
Q ss_pred CccccccHHHHHHHHHHHHhcc-----cCCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCC-Cccch
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQ-----TASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQE-EKITN 73 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~-----~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~-~~g~v 73 (103)
|||||||||||+||+++++.+. ..++ ++||||+|+.+.|++|.+||++|.++ ..+++++++|++++ .++||
T Consensus 284 lIagGtGIAP~~s~l~~~~~~~~~~~~~~~~--~~L~~G~R~~~~d~ly~~El~~~~~~~~~~~l~~a~Sr~~~~~k~yV 361 (435)
T 1f20_A 284 LVGPGTGIAPFRSFWQQRQFDIQHKGMNPCP--MVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYV 361 (435)
T ss_dssp EECCGGGGHHHHHHHHHHHHHHHHHCCCCCC--EEEEEEESCTTTSCTTHHHHHHHHHTTSEEEEEEEESSCTTSCCCCH
T ss_pred EEECCcCcHHHHHHHHHHHHhhhhccCCCCC--EEEEEeecccccchhHHHHHHHHHHcCCccEEEEEECCCCCCCCcch
Confidence 7999999999999999987642 2344 99999999983389999999999987 55679999999875 38999
Q ss_pred hHHHhhc-HHhhccccCCCCcEEEEeecC
Q psy12843 74 NLSFESR-VEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 74 ~~~l~~~-~~~l~~~l~~~~~~~yvcg~p 101 (103)
|+.+.++ .+.++.++...+++|||||++
T Consensus 362 q~~l~~~l~~~~~~~l~~~~~~vYvCGp~ 390 (435)
T 1f20_A 362 QDVLQEQLAESVYRALKEQGGHIYVCGDV 390 (435)
T ss_dssp HHHHHHHSHHHHHHHHHTSCCEEEEEECH
T ss_pred hhHHHhhhHHHHHHHHhcCCcEEEEeCCh
Confidence 9999877 566777665568999999986
No 6
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=99.90 E-value=1.1e-23 Score=153.27 Aligned_cols=98 Identities=34% Similarity=0.568 Sum_probs=83.1
Q ss_pred CccccccHHHHHHHHHHHHh---ccc-CCCceEEEEEeeccCCCccccHHHHHHHHhCCCeEEEEEEeCC-CCCccchhH
Q psy12843 1 MVGPGTGIAPFRSYIHTRIS---NQT-ASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLTLYTAFSRD-QEEKITNNL 75 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~---~~~-~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~~~~~~~~~~s~~-~~~~g~v~~ 75 (103)
|||||||||||+||++++.. ++. .++ ++||||+|+..+|++|.+||++|.+.+++++++++||+ +..++|||+
T Consensus 245 mIg~GtGIAPf~s~l~~r~~~~~~g~~~~~--v~L~~G~R~~~~d~ly~~el~~~~~~~~l~l~~a~Sr~~~~~k~yVq~ 322 (393)
T 4dql_A 245 MVGPGTGVAPFRGFVQARKQLKEQGQSLGE--AHLYFGCRSPHEDYLYQEELENAQSEGIITLHTAFSRMPNQPKTYVQH 322 (393)
T ss_dssp EECCGGGGHHHHHHHHHHHHHHHTTCCCCC--EEEEEEESCTTTCCTTHHHHHHHHHTTSCEEEEEESSCTTSCCCCHHH
T ss_pred EEccCceechHHHHHHHHHHHHhcCCCCCC--EEEEEEECCcchhhHHHHHHHHHHhCCCeEEEEEEeCCCCCCCcchhh
Confidence 79999999999999998643 222 234 99999999932799999999999988999999999994 447899999
Q ss_pred HHhhcHHhhccccCCCCcEEEEeecC
Q psy12843 76 SFESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 76 ~l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
.+.++.+.++.++. ++++|||||+.
T Consensus 323 ~l~~~~~~l~~~l~-~~~~vYvCGp~ 347 (393)
T 4dql_A 323 VMEQDGKKLIELLD-QGAHFYICGDG 347 (393)
T ss_dssp HHHHTHHHHHHHHH-TTCEEEEEEET
T ss_pred HHHhCHHHHHHHHh-CCcEEEEECCc
Confidence 99998888888775 68999999973
No 7
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=99.90 E-value=5.9e-24 Score=163.28 Aligned_cols=96 Identities=27% Similarity=0.561 Sum_probs=83.2
Q ss_pred CccccccHHHHHHHHHHHHhccc----------CCCceEEEEEeeccCCCccccHHHHHHHHh-C-CCeEEEEEEeC-CC
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQT----------ASAQRLHLFFGCRNQGADFYFNQEWQNAIQ-A-NQLTLYTAFSR-DQ 67 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~----------~~~~~v~l~~g~r~~~~d~~~~~el~~~~~-~-~~~~~~~~~s~-~~ 67 (103)
|||+|||||||+||++++..++. .++ ++||||+|+. .|++|.+||++|+. . .++++++++|| ++
T Consensus 529 mIg~GTGIAPfrs~lq~r~~~~~~~~~~~~g~~~~~--~~L~fG~R~~-~D~ly~dEl~~~~~~~g~~~~l~~afSr~d~ 605 (682)
T 2bpo_A 529 MIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGK--HILFYGSRNT-DDFLYQDEWPEYAKKLDGSFEMVVAHSRLPN 605 (682)
T ss_dssp EEEEGGGGHHHHHHHHHHHHHHHTCC----CCCCCC--EEEEEEESSS-SSCTTTTTHHHHHHHHGGGEEEEEEESCCTT
T ss_pred EEecCcChHHHHHHHHHHHHhhcccccccccCCcCC--EEEEEecCCh-hhhhhHHHHHHHHHhcCCceEEEEEECCCCC
Confidence 79999999999999999876543 244 9999999999 89999999999954 3 56889999999 44
Q ss_pred CCccchhHHHhhcHHhhccccCCCCcEEEEeec
Q psy12843 68 EEKITNNLSFESRVEAKIPYLGWDSTYIILIIR 100 (103)
Q Consensus 68 ~~~g~v~~~l~~~~~~l~~~l~~~~~~~yvcg~ 100 (103)
+.++|||+.|.+..+.++.++. ++++|||||+
T Consensus 606 ~~k~yVqd~l~e~~~~l~~~l~-~~~~vYvCGp 637 (682)
T 2bpo_A 606 TKKVYVQDKLKDYEDQVFEMIN-NGAFIYVCGD 637 (682)
T ss_dssp SCCCCHHHHHHHTHHHHHHHHT-TTCEEEEEEC
T ss_pred CCCcchHHHHHhhHHHHHHHHh-CCcEEEEeCC
Confidence 5799999999998888888884 6899999998
No 8
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=99.90 E-value=1.6e-23 Score=147.63 Aligned_cols=101 Identities=26% Similarity=0.377 Sum_probs=86.1
Q ss_pred CccccccHHHHHHHHHHHHhcccCC---CceEEEEEeeccCCCccccHHHHHHHHhC-C-CeEEEEEEeCCCC----Ccc
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTAS---AQRLHLFFGCRNQGADFYFNQEWQNAIQA-N-QLTLYTAFSRDQE----EKI 71 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~---~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~-~~~~~~~~s~~~~----~~g 71 (103)
|||||||||||++|+++++.++... ..+++||||+|+. +|++|.+||++|+++ + +|++++++|++++ .++
T Consensus 163 lIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~-~d~~~~~el~~l~~~~~~~~~v~~~~sr~~~~~~g~~~ 241 (310)
T 3vo2_A 163 MLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTS-DSLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAGEKM 241 (310)
T ss_dssp EEEEGGGGHHHHHHHHHHHSSCCTTCCCCSEEEEEEEESSG-GGCCSHHHHHHHHHHCTTTEEEEEEETTTCBCTTCCBC
T ss_pred EEeCCcchhHHHHHHHHHHHhhcccccCCCcEEEEEEecCh-hhcccHHHHHHHHHhCCCCEEEEEEECCCCCCCCCcce
Confidence 6999999999999999998654211 0149999999999 799999999999887 4 8999999999863 589
Q ss_pred chhHHHhhcHHhhccccCCCCcEEEEeecCC
Q psy12843 72 TNNLSFESRVEAKIPYLGWDSTYIILIIRPE 102 (103)
Q Consensus 72 ~v~~~l~~~~~~l~~~l~~~~~~~yvcg~p~ 102 (103)
||++.+.+..+.+..++..+++.||+||+|.
T Consensus 242 ~v~~~l~~~~~~l~~~l~~~~~~vyvCGp~~ 272 (310)
T 3vo2_A 242 YIQTRMAEYREELWELLKKDNTYVYMCGLKG 272 (310)
T ss_dssp CHHHHHHTTHHHHHHHHTSTTEEEEEEESTT
T ss_pred ehHHHHHHHHHHHHHhcccCCcEEEEeCCHH
Confidence 9999999887788777777899999999874
No 9
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=99.90 E-value=1e-23 Score=149.29 Aligned_cols=99 Identities=13% Similarity=0.261 Sum_probs=85.3
Q ss_pred CccccccHHHHHHHHHHHHhccc----------CCCceEEEEEeeccCCCccccHHHHHHHHhC-C-CeEEEEEEeCCCC
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQT----------ASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-N-QLTLYTAFSRDQE 68 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~----------~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~-~~~~~~~~s~~~~ 68 (103)
|||||||||||+||+++++.++. .+ +++||||+|+. +|++|.+||++|+++ + +|++++++|++++
T Consensus 175 lIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~--~v~L~~g~R~~-~d~~~~~eL~~l~~~~~~~~~~~~~~s~~~~ 251 (316)
T 3jqq_A 175 FIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTG--YITIYYGVYNE-DSILYLNELEYFQKMYPNNINIHYVFSYKQN 251 (316)
T ss_dssp EEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCC--CEEEEEEESSG-GGCTTHHHHHHHHHHCTTTEEEEEEEGGGCC
T ss_pred EEeCCceechHHHHHHHHHHhccccccccccCCCC--cEEEEEEecCH-HHhhcHHHHHHHHHhCCCcEEEEEEECCCcc
Confidence 69999999999999999987642 23 49999999999 799999999999876 4 8999999998753
Q ss_pred ---CccchhHHHhhcHHhhccccCCCCcEEEEeecCC
Q psy12843 69 ---EKITNNLSFESRVEAKIPYLGWDSTYIILIIRPE 102 (103)
Q Consensus 69 ---~~g~v~~~l~~~~~~l~~~l~~~~~~~yvcg~p~ 102 (103)
.++||++.+.+..+.+..++..+++.||+||+|.
T Consensus 252 ~~g~~g~V~~~l~~~~~~~~~~l~~~~~~vyvCGP~~ 288 (316)
T 3jqq_A 252 SDATSFYVQDEIYKRKTEFLNLFNNYKCELYICGKKS 288 (316)
T ss_dssp ---CBCCHHHHHHHTHHHHHHHHHHTCCEEEEEECST
T ss_pred cCCCccchhHHHHHhHHHHHHhhccCCeEEEEeCCHH
Confidence 6899999999887777777766789999999984
No 10
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=99.88 E-value=5.6e-23 Score=158.03 Aligned_cols=99 Identities=31% Similarity=0.452 Sum_probs=82.7
Q ss_pred CccccccHHHHHHHHHHHHhc-----ccCCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCCC-ccch
Q psy12843 1 MVGPGTGIAPFRSYIHTRISN-----QTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQEE-KITN 73 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~-----~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~~-~g~v 73 (103)
|||||||||||+||+++++.+ ...++ ++||||+|+.+.|++|.+||++|.++ .++++++++|+++.. ++||
T Consensus 505 lIagGtGIAP~~s~l~~~~~~~~~~~~~~~~--v~L~~G~R~~~~D~ly~dEL~~~~~~~~~~~l~~a~Sr~~~~~k~yV 582 (688)
T 1tll_A 505 LVGPGTGIAPFRSFWQQRQFDIQHKGMNPCP--MVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYV 582 (688)
T ss_dssp EEEEGGGGTTHHHHHHHHHHHHHHSCCCCCC--EEEEEEESCTTTTCTTHHHHHHHHHTTSEEEEEEEESSCTTSCCCCH
T ss_pred EEEcCcchHHHHHHHHHHHHhhhhccCCCCC--EEEEEEeccchhhhhHHHHHHHHHHcCCceEEEEEECCCCCCCccch
Confidence 799999999999999998764 22344 99999999983389999999999887 556899999998753 8999
Q ss_pred hHHHhhc-HHhhccccCCCCcEEEEeecC
Q psy12843 74 NLSFESR-VEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 74 ~~~l~~~-~~~l~~~l~~~~~~~yvcg~p 101 (103)
|++|.++ .+.++.++..++++|||||++
T Consensus 583 q~~l~~~l~~~l~~~l~~~~~~vYvCGp~ 611 (688)
T 1tll_A 583 QDVLQEQLAESVYRALKEQGGHIYVCGDV 611 (688)
T ss_dssp HHHHHHSSHHHHHHHHHTSCCEEEEEEEH
T ss_pred hhhhHHhHHHHHHHhhccCCcEEEEeCCH
Confidence 9999987 666776664568999999985
No 11
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=99.88 E-value=1.2e-22 Score=143.12 Aligned_cols=99 Identities=26% Similarity=0.408 Sum_probs=82.5
Q ss_pred CccccccHHHHHHHHHHHHhccc-----CCCceEEEEEeeccCCCccccHHHHHHHHhC-C-CeEEEEEEeCCCC----C
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQT-----ASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-N-QLTLYTAFSRDQE----E 69 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~-----~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~-~~~~~~~~s~~~~----~ 69 (103)
|||||||||||++|+++++.++. .+ +++||||+|+. +|++|.+||++|.++ + ++++++++|++++ .
T Consensus 167 lIagGtGIaP~~s~l~~~~~~~~~~~~~~~--~v~L~~g~R~~-~d~~~~~el~~l~~~~~~~~~~~~~~s~~~~~~~g~ 243 (314)
T 1fnb_A 167 MLGTGTGIAPFRSFLWKMFFEKHDDYKFNG--LAWLFLGVPTS-SSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGE 243 (314)
T ss_dssp EEEEGGGGHHHHHHHHHHHTCCBTTBCCCS--EEEEEEEESSG-GGCCSHHHHHHHHHHCTTTEEEEEEETTTCBCTTCC
T ss_pred EEeCCccHHHHHHHHHHHHHhccccccCCC--CEEEEEecCCH-HHhhhHHHHHHHHHhCCCcEEEEEEECCCCcccCCC
Confidence 69999999999999999986542 23 49999999999 899999999999876 4 7999999998753 5
Q ss_pred ccchhHHHhhcHHhhccccCCCCcEEEEeecCC
Q psy12843 70 KITNNLSFESRVEAKIPYLGWDSTYIILIIRPE 102 (103)
Q Consensus 70 ~g~v~~~l~~~~~~l~~~l~~~~~~~yvcg~p~ 102 (103)
++||++.|.+..+.+...+..+++++|+||+|.
T Consensus 244 ~~~v~~~l~~~~~~~~~~~~~~~~~vyvCGp~~ 276 (314)
T 1fnb_A 244 KMYIQTRMAQYAVELWEMLKKDNTYVYMCGLKG 276 (314)
T ss_dssp BCCHHHHHHTTHHHHHHHTTSTTEEEEEEECTT
T ss_pred ceechHHHHHhHHHHHHHHhcCCeEEEEECCHH
Confidence 899999998776666555544688999999874
No 12
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=99.88 E-value=1.1e-22 Score=142.64 Aligned_cols=99 Identities=20% Similarity=0.324 Sum_probs=83.2
Q ss_pred CccccccHHHHHHHHHHHHhccc---------CCCceEEEEEeeccCCCccccHHHHHHHHhC-C-CeEEEEEEeCCCC-
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQT---------ASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-N-QLTLYTAFSRDQE- 68 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~---------~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~-~~~~~~~~s~~~~- 68 (103)
|||||||||||+||+++++.+.. .++ ++|+||+|+. +|++|.+||+++.++ + ++++++++|++++
T Consensus 153 lIagGtGIaP~~s~l~~~~~~~~~~~~~~~~~~~~--v~l~~g~r~~-~d~~~~~el~~~~~~~~~~~~~~~~~s~~~~~ 229 (304)
T 2bmw_A 153 MLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGF--SWLVFGVPTT-PNILYKEELEEIQQKYPDNFRLTYAISREQKN 229 (304)
T ss_dssp EEEEGGGHHHHHHHHHHHHCHHHHHHCTTCCCCSC--EEEEEEESSG-GGCTTHHHHHHHHHHCTTTEEEEEEETTTCBC
T ss_pred EEecCccHHHHHHHHHHHHHhhhhhcccccccCCC--EEEEEEeCCh-HhcchHHHHHHHHHhCCCcEEEEEEEcCCCCC
Confidence 69999999999999999876431 233 9999999999 899999999999876 4 8999999998753
Q ss_pred ---CccchhHHHhhcHHhhccccCCCCcEEEEeecCC
Q psy12843 69 ---EKITNNLSFESRVEAKIPYLGWDSTYIILIIRPE 102 (103)
Q Consensus 69 ---~~g~v~~~l~~~~~~l~~~l~~~~~~~yvcg~p~ 102 (103)
.++||++.+.+..+.+..++...++.+|+||+|.
T Consensus 230 ~~~~~~~v~~~l~~~~~~l~~~~~~~~~~vyvCGp~~ 266 (304)
T 2bmw_A 230 PQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICGPPP 266 (304)
T ss_dssp TTSSBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECTT
T ss_pred CCCCcceehHHHHHhHHHHHHHhhcCCcEEEEECCHH
Confidence 5789999998877777766666788999999874
No 13
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=99.88 E-value=1.2e-22 Score=147.90 Aligned_cols=101 Identities=21% Similarity=0.356 Sum_probs=84.4
Q ss_pred CccccccHHHHHHHHHHHHhcccCC---CceEEEEEeeccCCCccccHHHHHHHHhC-C-CeEEEEEEeCCCC----Ccc
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTAS---AQRLHLFFGCRNQGADFYFNQEWQNAIQA-N-QLTLYTAFSRDQE----EKI 71 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~---~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~-~~~~~~~~s~~~~----~~g 71 (103)
|||||||||||++|+++++.++... ..+++||||+|+. +|++|.+||++|.++ + +|++++++|++++ .++
T Consensus 255 lIAgGtGIaP~~s~l~~l~~~~~~~~~~~~~v~L~~g~R~~-~d~~~~~eL~~l~~~~~~~~~v~~~~S~~~~~~~g~~~ 333 (402)
T 2b5o_A 255 MLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYT-ANILYKDDFEKMAAENPDNFRLTYAISREQKTADGGKV 333 (402)
T ss_dssp EEEEGGGGHHHHHHHHHHHTCCCSSCCCCSEEEEEEEESSG-GGCTTHHHHHHHHHHCTTTEEEEEEETTTCBCTTSCBC
T ss_pred EEEcccCHHHHHHHHHHHHHhccccccccCCEEEEEecCCH-HHhHHHHHHHHHHHhCCCcEEEEEEECCCCcccCCCcc
Confidence 6999999999999999998754210 1149999999999 799999999999876 4 8999999998753 578
Q ss_pred chhHHHhhcHHhhccccCCCCcEEEEeecCC
Q psy12843 72 TNNLSFESRVEAKIPYLGWDSTYIILIIRPE 102 (103)
Q Consensus 72 ~v~~~l~~~~~~l~~~l~~~~~~~yvcg~p~ 102 (103)
||++.|.+..+.+..++.++++++|+||+|.
T Consensus 334 ~v~~~l~~~~~~l~~~l~~~~~~vyvCGP~~ 364 (402)
T 2b5o_A 334 YVQSRVSEYADELFEMIQKPNTHVYMCGLKG 364 (402)
T ss_dssp CHHHHHHHTHHHHHHHHTSTTEEEEEEECGG
T ss_pred chHHHHHHhHHHHHHHhccCCcEEEEECCHH
Confidence 9999999877777777765689999999863
No 14
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=99.87 E-value=2.9e-22 Score=140.95 Aligned_cols=100 Identities=22% Similarity=0.391 Sum_probs=81.2
Q ss_pred CccccccHHHHHHHHHHHHhcccCC---CceEEEEEeeccCCCccccHHHHHHHHhC-C-CeEEEEEEeCCCC----Ccc
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTAS---AQRLHLFFGCRNQGADFYFNQEWQNAIQA-N-QLTLYTAFSRDQE----EKI 71 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~---~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~-~~~~~~~~s~~~~----~~g 71 (103)
|||||||||||++|+++++.++..+ ..+++|+||+|+. +|++|.+||++|+++ + +|++++++|++++ .++
T Consensus 165 lIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~l~~g~r~~-~d~~~~~el~~l~~~~~~~~~~~~~~s~~~~~~~g~~~ 243 (311)
T 3lo8_A 165 MIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANS-DSLLYDEEFTSYLKQYPDNFRYDKALSREQKNRSGGKM 243 (311)
T ss_dssp EEEEGGGGHHHHHHHHHHHTEECTTCCCCSEEEEEEEESSG-GGCSSHHHHHHHHHHCTTTEEEEEEETTTC-------C
T ss_pred EEECCEEHHHHHHHHHHHHHhccccccCCCCEEEEEecCCh-HHhhHHHHHHHHHHhCCCcEEEEEEECCCCcccCCCcc
Confidence 6999999999999999998765320 0149999999999 899999999999876 4 8999999999764 589
Q ss_pred chhHHHhhcHHhhccccCCCCcEEEEeecCC
Q psy12843 72 TNNLSFESRVEAKIPYLGWDSTYIILIIRPE 102 (103)
Q Consensus 72 ~v~~~l~~~~~~l~~~l~~~~~~~yvcg~p~ 102 (103)
||++.+.+..+.+..++. .+..+|+||+|.
T Consensus 244 ~v~~~l~~~~~~~~~~~~-~~~~vyvCGp~~ 273 (311)
T 3lo8_A 244 YVQDKIEEYSDEIFKLLD-GGAHIYFCGLKG 273 (311)
T ss_dssp CHHHHHHHTHHHHHHHHH-TTCEEEEEECGG
T ss_pred eehHHHHHHHHHHHHhhc-CCcEEEEECCHH
Confidence 999999887666665553 689999999874
No 15
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=99.86 E-value=7.5e-22 Score=138.98 Aligned_cols=98 Identities=18% Similarity=0.313 Sum_probs=79.1
Q ss_pred CccccccHHHHHHHHHHHHhccc---CCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCC-----Ccc
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQT---ASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQE-----EKI 71 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~---~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~-----~~g 71 (103)
|||||||||||++|++++..++. .++ ++|+||+|+. +|++|.+||+++.++ ++++++.++|++++ .++
T Consensus 170 lIagGtGIaP~~s~l~~l~~~~~~~~~~~--v~l~~g~r~~-~d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~g~~~ 246 (314)
T 2rc5_A 170 FLATGTGIAPFIGMSEELLEHKLIKFTGN--ITLVYGAPYS-DELVMMDYLKGLESKHKNFKLITAISREEKNSFDGGRM 246 (314)
T ss_dssp EEEEGGGGHHHHHHHHHHHTTCSSCBCSC--EEEEEEESSG-GGSCSHHHHHHHHHHHSSEEEEEEETTTCBCTTTSSBC
T ss_pred EEECCccHHHHHHHHHHHHHhcccCCCCc--EEEEEEeCCH-HHHhHHHHHHHHHHhCCcEEEEEEECCCCCcccCCCce
Confidence 69999999999999999986542 234 9999999999 799999999999876 78999999998742 478
Q ss_pred chhHHHhhcHHhhccccCCCCcEEEEeecCC
Q psy12843 72 TNNLSFESRVEAKIPYLGWDSTYIILIIRPE 102 (103)
Q Consensus 72 ~v~~~l~~~~~~l~~~l~~~~~~~yvcg~p~ 102 (103)
||++.+.+..+.+..++...+.. |+||+|.
T Consensus 247 ~v~~~l~~~~~~l~~~~~~~~~~-yvCGGp~ 276 (314)
T 2rc5_A 247 YISHRVREQAEAVKKILNGGGRF-YICGGPK 276 (314)
T ss_dssp CHHHHHHHTHHHHHHHHHHTCEE-EEEESST
T ss_pred ehhHHHHHhHHHHHHHhhcCCeE-EEeCCcH
Confidence 99999988766665555334555 9995553
No 16
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.84 E-value=9.1e-21 Score=128.09 Aligned_cols=92 Identities=15% Similarity=0.154 Sum_probs=76.3
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCC----CccchhH
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQE----EKITNNL 75 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~----~~g~v~~ 75 (103)
||||||||||+++|++++..++...+ ++|+|++|+. +|++|.+||++++++ ++++++.++|++++ .+|++++
T Consensus 107 liagG~GitP~~~~l~~l~~~~~~~~--v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~g~~g~v~~ 183 (232)
T 1qfj_A 107 LIAGGTGFSYARSILLTALARNPNRD--ITIYWGGREE-QHLYDLCELEALSLKHPGLQVVPVVEQPEAGWRGRTGTVLT 183 (232)
T ss_dssp EEEETTCHHHHHHHHHHHHHHCTTCC--EEEEEEESSG-GGCTTHHHHHHHHHHCTTEEEEEEESSCCTTCCSEESCHHH
T ss_pred EEEecccHhHHHHHHHHHHhcCCCCc--EEEEEeeCCH-HHhhhHHHHHHHHHHCCCeEEEEEEcCCCCCcCCceeeHHH
Confidence 69999999999999999987654454 9999999999 899999999999875 88999999988653 4688888
Q ss_pred HHhhcHHhhccccCCCCcEEEEeecC
Q psy12843 76 SFESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 76 ~l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
.+.+. +.+..+.++|+||+|
T Consensus 184 ~~~~~------~~~~~~~~vyvCGp~ 203 (232)
T 1qfj_A 184 AVLQD------HGTLAEHDIYIAGRF 203 (232)
T ss_dssp HHHHH------CSCCTTCEEEEESCH
T ss_pred HHHHh------cCCccccEEEEECCH
Confidence 76642 123467899999976
No 17
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.82 E-value=3e-20 Score=129.15 Aligned_cols=96 Identities=13% Similarity=0.193 Sum_probs=75.4
Q ss_pred CccccccHHHHHHHHHHHHhccc-CCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCC------Cccc
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQT-ASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQE------EKIT 72 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~-~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~------~~g~ 72 (103)
|||||||||||+||+++++.+.. ..+ ++|+||+|+. +|++|.+||++++++ ++++++.++|++.. .+|+
T Consensus 161 liagGtGitP~~s~l~~~~~~~~~~~~--v~l~~~~r~~-~d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~~g~~g~ 237 (290)
T 2r6h_A 161 YIGGGAGMAPLRAQILHLFRTLKTGRK--VSYWYGARSK-NEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGF 237 (290)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTSCCCSC--EEEEEEESSG-GGCCSHHHHHHHHHHCTTEEEEEEESSCCGGGCCCSCBSC
T ss_pred EEECccCHHHHHHHHHHHHHhcCCCCc--EEEEEEcCCH-HHHHHHHHHHHHHHhCCCeEEEEEEccCCcccCCCCeeEe
Confidence 69999999999999999887532 334 9999999999 799999999999875 88999999998642 4789
Q ss_pred hhHHHhhcHHhhccccCCCCcEEEEeecC
Q psy12843 73 NNLSFESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 73 v~~~l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
|++.+.+. .+..+....++++|+||+|
T Consensus 238 v~~~~~~~--~l~~~~~~~~~~vyvCGp~ 264 (290)
T 2r6h_A 238 IHQVIYDN--YLKDHDAPEDIEYYMCGPG 264 (290)
T ss_dssp HHHHHHHH--TTTTCSCGGGEEEEEECCH
T ss_pred cCHHHHHh--HHhhccCcCCcEEEEECCH
Confidence 98876432 1222223357799999976
No 18
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.82 E-value=2.3e-20 Score=127.59 Aligned_cols=93 Identities=18% Similarity=0.287 Sum_probs=76.0
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCC----CccchhH
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQE----EKITNNL 75 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~----~~g~v~~ 75 (103)
||||||||||+++|++++..++...+ ++|+|++|+. +|++|.+||++|.++ ++++++.++|++++ .+|+|++
T Consensus 122 liagGtGiaP~~~~l~~l~~~~~~~~--v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~g~~g~v~~ 198 (250)
T 1tvc_A 122 FVAGGTGLAPVVSMVRQMQEWTAPNE--TRIYFGVNTE-PELFYIDELKSLERSMRNLTVKACVWHPSGDWEGEQGSPID 198 (250)
T ss_dssp EEEESSTTHHHHHHHHHHHHHTCCSC--EEEEEECSSS-TTCCCHHHHHHHHHHSSSCEEEECCSSCSSCCSSSSSSSSH
T ss_pred EEEeccCHHHHHHHHHHHHhcCCCce--EEEEEEeCCH-HHhhhHHHHHHHHHhCCCeEEEEEeccCCCCcCCccceehH
Confidence 69999999999999999987654444 9999999999 799999999999865 88999999987542 5789998
Q ss_pred HHhhcHHhhccccCCCCcEEEEeecC
Q psy12843 76 SFESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 76 ~l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
.+.+.... . ..+..+|+||+|
T Consensus 199 ~l~~~~~~---~--~~~~~vyvCGp~ 219 (250)
T 1tvc_A 199 ALREDLES---S--DANPDIYLCGPP 219 (250)
T ss_dssp HHHHHHHH---S--SSSSEEEEESSH
T ss_pred HHHhhhhc---c--cCCcEEEEeCCH
Confidence 77743221 1 357899999986
No 19
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.81 E-value=5e-20 Score=125.53 Aligned_cols=98 Identities=22% Similarity=0.257 Sum_probs=77.3
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhC--CCeEEEEEEeCCCC---CccchhH
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA--NQLTLYTAFSRDQE---EKITNNL 75 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~--~~~~~~~~~s~~~~---~~g~v~~ 75 (103)
||||||||||+++|++++...+... +++|+|++|+. +|++|.+||++++++ ++++++.++|+++. .+|+|++
T Consensus 111 liagG~GitP~~~~l~~l~~~~~~~--~v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~~s~~~~~~~~~g~v~~ 187 (248)
T 1fdr_A 111 MLATGTAIGPYLSILRLGKDLDRFK--NLVLVHAARYA-ADLSYLPLMQELEKRYEGKLRIQTVVSRETAAGSLTGRIPA 187 (248)
T ss_dssp EEEEGGGGHHHHHHHHHCCSCTTCS--EEEEEEEESSG-GGCTTHHHHHHHHHHTTTSEEEEEEESSSCCTTEEESCHHH
T ss_pred EEEecccHHHHHHHHHHHHhhCCCC--cEEEEEEcCCH-HHhhHHHHHHHHHHhCcCcEEEEEEEecCCCCCCcceeeCh
Confidence 6999999999999999986544334 49999999999 899999999999875 58999999998764 3789998
Q ss_pred HHhhcH-Hhhccc-cCCCCcEEEEeecC
Q psy12843 76 SFESRV-EAKIPY-LGWDSTYIILIIRP 101 (103)
Q Consensus 76 ~l~~~~-~~l~~~-l~~~~~~~yvcg~p 101 (103)
.+.+.. +....+ +...++.+|+||+|
T Consensus 188 ~l~~~~l~~~~~~~~~~~~~~vy~CGp~ 215 (248)
T 1fdr_A 188 LIESGELESTIGLPMNKETSHVMLCGNP 215 (248)
T ss_dssp HHHTSHHHHHHTSCCCTTTEEEEEEECH
T ss_pred HHHhhhHHHhhccCCCccCCEEEEeCCH
Confidence 877542 222221 34568899999986
No 20
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.80 E-value=7.3e-20 Score=129.93 Aligned_cols=92 Identities=21% Similarity=0.230 Sum_probs=76.0
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCC---CccchhHH
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQE---EKITNNLS 76 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~---~~g~v~~~ 76 (103)
||||||||||+++|++++..++...+ ++|+||+|+. +|++|.++|++|+++ ++++++.++|++++ .+|+|++.
T Consensus 215 liagGtGiaP~~s~l~~l~~~~~~~~--v~l~~~~r~~-~d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~~g~v~~~ 291 (338)
T 1krh_A 215 MLAGGTGIAPFLSMLQVLEQKGSEHP--VRLVFGVTQD-CDLVALEQLDALQQKLPWFEYRTVVAHAESQHERKGYVTGH 291 (338)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHCCSSC--EEEEEEESSG-GGCCCHHHHHHHHHHCTTEEEEEEETTCCSSSSEESCSGGG
T ss_pred EEEccccHhHHHHHHHHHHHcCCCCe--EEEEEEeCCH-HHhhhHHHHHHHHHhCCCeEEEEEEecCCCCCCccCccCHH
Confidence 69999999999999999987654444 9999999999 899999999999876 88999999998764 36889887
Q ss_pred HhhcHHhhccccCCCCcEEEEeecC
Q psy12843 77 FESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 77 l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
+.+. .+...+.++|+||+|
T Consensus 292 l~~~------~~~~~~~~vy~CGp~ 310 (338)
T 1krh_A 292 IEYD------WLNGGEVDVYLCGPV 310 (338)
T ss_dssp CCGG------GGGGGCSEEEEEEEH
T ss_pred HHHh------hcccCCcEEEEECCH
Confidence 6631 122257799999986
No 21
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.79 E-value=2.3e-19 Score=123.94 Aligned_cols=94 Identities=19% Similarity=0.317 Sum_probs=72.6
Q ss_pred CccccccHHHHHHHHHHHHhcc-cCCCceEEEEEeeccCCCccccHHHHHHHHhC-C-CeEEEEEEeCCCC----Cccch
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQ-TASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-N-QLTLYTAFSRDQE----EKITN 73 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~-~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~-~~~~~~~~s~~~~----~~g~v 73 (103)
||||||||||+++|+++++.+. ... +++|+|++|+. +|++|.+||++|+++ + +++++.++|++++ .+|+|
T Consensus 151 liagGtGIaP~~~~l~~l~~~~~~~~--~v~l~~~~r~~-~d~~~~~el~~l~~~~~~~~~~~~~~s~~~~~~~~~~g~v 227 (275)
T 1umk_A 151 MIAGGTGITPMLQVIRAIMKDPDDHT--VCHLLFANQTE-KDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFV 227 (275)
T ss_dssp EEEEGGGHHHHHHHHHHHHTCTTCCC--EEEEEEEESSG-GGCTTHHHHHHHHHHCTTTEEEEEEESSCCSSCSSEESSC
T ss_pred EEecCccHhHHHHHHHHHHhCCCCCc--EEEEEEEcCCH-HHhhHHHHHHHHHHhCcCcEEEEEEEcCCCccccCccCcc
Confidence 6999999999999999998752 233 49999999999 899999999999876 4 7999899988653 37888
Q ss_pred hHHHhhcHHhhccccCCCCcEEEEeecC
Q psy12843 74 NLSFESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 74 ~~~l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
++.+.+. .+ ... ..++.+|+||+|
T Consensus 228 ~~~~l~~--~l-~~~-~~~~~vyvCGp~ 251 (275)
T 1umk_A 228 NEEMIRD--HL-PPP-EEEPLVLMCGPP 251 (275)
T ss_dssp CHHHHHH--HS-CCG-GGCCEEEEESCH
T ss_pred CHHHHHH--hc-CCC-CCCeEEEEECCH
Confidence 8743221 11 111 257899999986
No 22
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.79 E-value=1.8e-19 Score=122.41 Aligned_cols=91 Identities=16% Similarity=0.288 Sum_probs=72.3
Q ss_pred CccccccHHHHHHHHHHHHhcc-cCCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCC----Cccchh
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQ-TASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQE----EKITNN 74 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~-~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~----~~g~v~ 74 (103)
||||||||||+++|++++..+. ... +++|+|++|+. +|++|.+||++|+++ ++++++.++|++++ .+|+|+
T Consensus 121 liagG~GiaP~~~~l~~l~~~~~~~~--~v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~g~~g~v~ 197 (243)
T 2eix_A 121 MIAGGTGITPMLQVARAIIKNPKEKT--IINLIFANVNE-DDILLRTELDDMAKKYSNFKVYYVLNNPPAGWTGGVGFVS 197 (243)
T ss_dssp EEEEGGGHHHHHHHHHHHHTCTTCCC--EEEEEEEEEEG-GGCTTHHHHHHHHHHCTTEEEEEEEEECCTTCCSEESSCC
T ss_pred EEecCccHHHHHHHHHHHHhCCCCCc--EEEEEEEcCCH-HHhhHHHHHHHHHHHCCCeEEEEEeCCCCccccCcCCccC
Confidence 6999999999999999998652 233 49999999999 899999999999876 78999999987542 468888
Q ss_pred HH-HhhcHHhhccccC--CCCcEEEEeecC
Q psy12843 75 LS-FESRVEAKIPYLG--WDSTYIILIIRP 101 (103)
Q Consensus 75 ~~-l~~~~~~l~~~l~--~~~~~~yvcg~p 101 (103)
+. +.+ ++. ..+..+|+||+|
T Consensus 198 ~~~l~~-------~~~~~~~~~~vy~CGp~ 220 (243)
T 2eix_A 198 ADMIKQ-------HFSPPSSDIKVMMCGPP 220 (243)
T ss_dssp HHHHHH-------HSCCTTSSEEEEEESSH
T ss_pred HHHHHH-------hcCCCCCCeEEEEECCH
Confidence 53 332 122 256789999986
No 23
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.79 E-value=2.1e-19 Score=124.39 Aligned_cols=98 Identities=15% Similarity=0.250 Sum_probs=76.4
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHH-HHHh--------CCCeEEEEEEeCCCC-Cc
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQ-NAIQ--------ANQLTLYTAFSRDQE-EK 70 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~-~~~~--------~~~~~~~~~~s~~~~-~~ 70 (103)
||||||||||+++|++++...+... +++|+|++|+. +|++|.+||+ +|++ .++|+++.++|+++. .+
T Consensus 125 liagG~GiaP~~~~l~~l~~~~~~~--~v~l~~~~r~~-~~~~~~~el~~~l~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 201 (272)
T 2bgi_A 125 FLATGTGIAPFASLMREPEAYEKFD--EVIMMHACRTV-AELEYGRQLVEALQEDPLIGELVEGKLKYYPTTTREEFHHM 201 (272)
T ss_dssp EEEEGGGGHHHHHHTTCGGGGTSCS--EEEEEEEESSS-GGGHHHHHHHHHHHHCTTTTTTSTTTEEEEEEESSSCCSSB
T ss_pred EEeecccHHHHHHHHHHHHhcCCCC--cEEEEEEeCCH-HHhhHHHHHHHHHHhcchhhcccCCcEEEEEEecCCccccC
Confidence 6999999999999999987654334 49999999999 8999999999 9986 368999899998753 57
Q ss_pred cchhHHHhhcH-Hhhccc--cCCCCcEEEEeecC
Q psy12843 71 ITNNLSFESRV-EAKIPY--LGWDSTYIILIIRP 101 (103)
Q Consensus 71 g~v~~~l~~~~-~~l~~~--l~~~~~~~yvcg~p 101 (103)
|++++.+.+.. +....+ ++..++.+|+||+|
T Consensus 202 g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~ 235 (272)
T 2bgi_A 202 GRITDNLASGKVFEDLGIAPMNPETDRAMVCGSL 235 (272)
T ss_dssp CCHHHHHHSCHHHHHHTCCCCCTTTEEEEEEECH
T ss_pred ceechHHHhhhHhhhcccccCCCCCcEEEEECCH
Confidence 99998876532 111111 23467899999986
No 24
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.78 E-value=1.3e-19 Score=124.31 Aligned_cols=98 Identities=17% Similarity=0.218 Sum_probs=75.9
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHH-HHHh--------CCCeEEEEEEeCCCC-Cc
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQ-NAIQ--------ANQLTLYTAFSRDQE-EK 70 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~-~~~~--------~~~~~~~~~~s~~~~-~~ 70 (103)
||||||||||+++|++++...+...+ ++|+|++|+. +|++|.+||+ ++++ .++|+++.++|+++. .+
T Consensus 111 liagG~GitP~~~~l~~l~~~~~~~~--v~l~~~~r~~-~~~~~~~el~~~l~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 187 (257)
T 2qdx_A 111 LLSTGTGMAPFLSVIQDPETYERYEK--VILVHGVRWV-SELAYADFITKVLPEHEYFGDQVKEKLIYYPLVTREPFRNQ 187 (257)
T ss_dssp EEEEGGGGHHHHHHTTCHHHHHHCSE--EEEEEEESSG-GGCTTHHHHHTTGGGCTTTHHHHHHHEEEEEEESSSCCSSB
T ss_pred EEEeceEHHHHHHHHHHHHhcCCCCe--EEEEEEcCCH-HHhHhHHHHHHHHHhchhhhccCCCcEEEEEEecCCCcccC
Confidence 69999999999999999876543344 9999999999 8999999999 8876 357888889998753 57
Q ss_pred cchhHHHhhcH-Hhhccc--cCCCCcEEEEeecC
Q psy12843 71 ITNNLSFESRV-EAKIPY--LGWDSTYIILIIRP 101 (103)
Q Consensus 71 g~v~~~l~~~~-~~l~~~--l~~~~~~~yvcg~p 101 (103)
|+|++.+.+.. +....+ ++..++.+|+||+|
T Consensus 188 g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~ 221 (257)
T 2qdx_A 188 GRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSP 221 (257)
T ss_dssp SCHHHHHHHSHHHHHHTCCCCCTTTEEEEEEECH
T ss_pred ceechhhhhhhHHHhcccccCCcCCCEEEEECCH
Confidence 89998876531 111111 23467899999986
No 25
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.77 E-value=8.1e-19 Score=114.42 Aligned_cols=63 Identities=21% Similarity=0.366 Sum_probs=53.6
Q ss_pred CccccccHHHHHHHHHHHHhcc-------cCCCceEEEEEeeccCCCccc-cHHHHHHHHhC------C-CeEEEEEEeC
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQ-------TASAQRLHLFFGCRNQGADFY-FNQEWQNAIQA------N-QLTLYTAFSR 65 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~-------~~~~~~v~l~~g~r~~~~d~~-~~~el~~~~~~------~-~~~~~~~~s~ 65 (103)
||||||||||+++|+++++.+. ..+ +++|+|++|+. ++++ |.++|++++++ + ++++++++|+
T Consensus 22 lIagG~GItP~~s~l~~l~~~~~~~~~~~~~~--~v~l~~~~r~~-~~~~w~~~~l~~l~~~~~~~~~~~~~~~~~~~t~ 98 (186)
T 3a1f_A 22 LVGAGIGVTPFASILKSVWYKYCNNATNLKLK--KIYFYWLCRDT-HAFEWFADLLQLLESQMQERNNAGFLSYNIYLTG 98 (186)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCC--EEEEEEEESCT-TTTHHHHHHHHHHHHHHHHTTCTTSEEEEEEETT
T ss_pred EEecCccHHHHHHHHHHHHHHHhhcccCCCCc--EEEEEEEECCc-chHHHHHHHHHHHHHHHhhccCCCeEEEEEEEcC
Confidence 6999999999999999998753 223 49999999999 7998 99999998764 3 7999899987
Q ss_pred C
Q psy12843 66 D 66 (103)
Q Consensus 66 ~ 66 (103)
+
T Consensus 99 ~ 99 (186)
T 3a1f_A 99 W 99 (186)
T ss_dssp C
T ss_pred C
Confidence 5
No 26
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.76 E-value=1.2e-18 Score=125.90 Aligned_cols=92 Identities=16% Similarity=0.150 Sum_probs=72.2
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCC---------Cc
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQE---------EK 70 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~---------~~ 70 (103)
|||||||||||+||++++..++..++ ++|+||+|+. +|++|.++|++++++ +++++++++|++++ ..
T Consensus 264 lIagGtGitP~~s~l~~l~~~~~~~~--v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 340 (396)
T 1gvh_A 264 LISAGVGQTPMLAMLDTLAKAGHTAQ--VNWFHAAENG-DVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSE 340 (396)
T ss_dssp EEEEGGGGHHHHHHHHHHHHHTCCSC--EEEEEEESCT-TTCCSHHHHHHHHHTSSSEEEEEEESSCCHHHHHHTCCSEE
T ss_pred EEecchhHhHHHHHHHHHHhcCCCCc--EEEEEEeCCH-HHhhhHHHHHHHHHHCCCeEEEEEECCCCccccccCccCcc
Confidence 69999999999999999987654454 9999999999 799999999999887 88999999998753 24
Q ss_pred cchhHHHhhcHHhhccccCCCCcEEEEeecC
Q psy12843 71 ITNNLSFESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 71 g~v~~~l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
|+++.. .+...+..+++++|+||+|
T Consensus 341 G~~~~~------~l~~~~~~~~~~vyvCGp~ 365 (396)
T 1gvh_A 341 GLMDLS------KLEGAFSDPTMQFYLCGPV 365 (396)
T ss_dssp SSCCGG------GSSSCCCCTTCEEEEESCH
T ss_pred CcCCHH------HHhhccCCCCCEEEEeCCH
Confidence 555432 1222212248899999986
No 27
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.76 E-value=7.8e-19 Score=119.17 Aligned_cols=89 Identities=15% Similarity=0.230 Sum_probs=71.9
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhCCCeEEEEEEeCCCC---CccchhHHH
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLTLYTAFSRDQE---EKITNNLSF 77 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~~~~~~~~~~s~~~~---~~g~v~~~l 77 (103)
||||||||||+++|++++..++.. . ++|+|++|+. +|++|.+||++|+++.+++++++++++.+ ..|++++.+
T Consensus 119 liagGtGitp~~~~l~~l~~~~~~-~--v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~s~~~~~~~~~g~~~~~~ 194 (243)
T 4eh1_A 119 LISAGVGATPMQAILHTLAKQNKS-G--VTYLYACNSA-KEHTFAQETAQLIAQQGWMQQVWYRDESADDVLQGEMQLAE 194 (243)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTTCC-S--EEEEEEESSG-GGCTTHHHHHHHHHHHTCEEEEEESSCCCTTCEESSCCCTT
T ss_pred EEEccccHHHHHHHHHHHHHcCCC-e--EEEEEEeCCh-hhhhHHHHHHHHHHhCCeEEEEEEccCCCcccccCCccHHH
Confidence 689999999999999999876532 3 9999999999 79999999999986557888889988664 356665432
Q ss_pred hhcHHhhccccCCCCcEEEEeecC
Q psy12843 78 ESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
. .+...+..+|+||+|
T Consensus 195 ~--------~~~~~~~~vyvCGp~ 210 (243)
T 4eh1_A 195 L--------ILPIEDGDFYLCGPI 210 (243)
T ss_dssp S--------CCCTTTCEEEEEECH
T ss_pred e--------eccCCCcEEEEECCH
Confidence 2 234478999999986
No 28
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.76 E-value=1.1e-18 Score=120.16 Aligned_cols=94 Identities=20% Similarity=0.338 Sum_probs=71.4
Q ss_pred CccccccHHHHHHHHHHHHhccc--CCCceEEEEEeeccCCCccccHHHHHHHHhC-C-CeEEEEEEeCCC---C----C
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQT--ASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-N-QLTLYTAFSRDQ---E----E 69 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~--~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~-~~~~~~~~s~~~---~----~ 69 (103)
||||||||||+++|+++++.+.. .. +++|+||+|+. +|++|.+||++|+++ + ++++++++|++. + .
T Consensus 141 liagGtGiaP~~~~l~~l~~~~~~~~~--~v~l~~~~r~~-~d~~~~~el~~l~~~~~~~~~~~~~~s~~~~~~~~~~~~ 217 (270)
T 2cnd_A 141 MICGGSGITPMYQIIQAVLRDQPEDHT--EMHLVYANRTE-DDILLRDELDRWAAEYPDRLKVWYVIDQVKRPEEGWKYS 217 (270)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTTTTCCC--EEEEEEEESCG-GGCTTHHHHHHHHHHCTTTEEEEEEESCCSCGGGCCCSE
T ss_pred EEeccccHHHHHHHHHHHHhcCCCCCc--EEEEEEEcCCH-HHcchHHHHHHHHHHCcCcEEEEEEECCCCCCCCCcccc
Confidence 69999999999999999987532 23 49999999999 799999999999876 4 699888888731 1 3
Q ss_pred ccchhHHHhhcHHhhccccCCCCcEEEEeecC
Q psy12843 70 KITNNLSFESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 70 ~g~v~~~l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
+|+|++.+.+. +... ...++.+|+||+|
T Consensus 218 ~g~v~~~~l~~---~l~~-~~~~~~vyvCGp~ 245 (270)
T 2cnd_A 218 VGFVTEAVLRE---HVPE-GGDDTLALACGPP 245 (270)
T ss_dssp ESSCCHHHHHH---HSCC-CSSSEEEEEECCH
T ss_pred cccCCHHHHHH---hcCC-CcCCEEEEEECCH
Confidence 68888764321 1111 1246789999986
No 29
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.76 E-value=2.5e-18 Score=124.52 Aligned_cols=88 Identities=7% Similarity=0.098 Sum_probs=72.0
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCCCccchhHHHhh
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQEEKITNNLSFES 79 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~~~g~v~~~l~~ 79 (103)
||||||||||++||+++++.++..++ ++++||+|+. +|++|.++|++++++ +++++++++++++ |+++...
T Consensus 277 lIagG~GitP~~s~l~~l~~~~~~~~--v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~s~~~---g~~~~~~-- 348 (399)
T 4g1v_A 277 LLSSGVGVTPLLAMLEEQVKCNPNRP--IYWIQSSYDE-KTQAFKKHVDELLAECANVDKIIVHTDTE---PLINAAF-- 348 (399)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHCTTSC--EEEEEEESSS-TTSTTHHHHHHHHTTCSSEEEEEEETTTS---CCCCHHH--
T ss_pred EEecceeHhHHHHHHHHHHHcCCCCC--EEEEEecCCH-HHhhhHHHHHHHHHhCCCcEEEEEEeCCC---CcccHHH--
Confidence 69999999999999999988765555 9999999999 899999999999877 8899999998764 6666321
Q ss_pred cHHhhccccCCCCcEEEEeecC
Q psy12843 80 RVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 80 ~~~~l~~~l~~~~~~~yvcg~p 101 (103)
+...+.. ++.+|+||++
T Consensus 349 ----l~~~~~~-~~~vyvCGp~ 365 (399)
T 4g1v_A 349 ----LKEKSPA-HADVYTCGSL 365 (399)
T ss_dssp ----HHHHSCS-SCEEEEEECH
T ss_pred ----HHhhCCC-CCEEEEECCH
Confidence 1222333 8999999986
No 30
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.75 E-value=1.2e-19 Score=125.32 Aligned_cols=98 Identities=18% Similarity=0.249 Sum_probs=72.3
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhC-C--------CeEEEEEEeCCCC-Cc
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-N--------QLTLYTAFSRDQE-EK 70 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~--------~~~~~~~~s~~~~-~~ 70 (103)
||||||||||+++|++++..++...+ ++|+|++|+. +|++|.+||+++.++ + +++++.++|+++. .+
T Consensus 127 liagG~GitP~~~~l~~l~~~~~~~~--v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 203 (271)
T 4fk8_A 127 MLSTGTGLAPFMSIIRDPDIYERFDK--VVLTHTCRLK-GELAYMDYIKHDLPGHEYLGDVIREKLVYYPTVTREEFENE 203 (271)
T ss_dssp EEECGGGGHHHHHHTTCHHHHHHCSE--EEEEECCCSH-HHHHHHHHHHTCCTTCTTHHHHHHHHEEEEECC-------C
T ss_pred EEECCEEHHHHHHHHHHHHhcCCCCC--EEEEEecCCH-HHHhHHHHHHHHHHhCccccccccceEEEEEEecCCccccc
Confidence 68999999999999999877554444 9999999999 799999999998776 4 5788888888764 57
Q ss_pred cchhHHHhhcH--Hhhc-cccCCCCcEEEEeecC
Q psy12843 71 ITNNLSFESRV--EAKI-PYLGWDSTYIILIIRP 101 (103)
Q Consensus 71 g~v~~~l~~~~--~~l~-~~l~~~~~~~yvcg~p 101 (103)
|++++.+.+.. +.+. .-+...+..+|+||+|
T Consensus 204 G~v~~~~~~~~l~~~~~~~~~~~~~~~v~vCGp~ 237 (271)
T 4fk8_A 204 GRITDLIASGKLFTDLDMPPFSPEQDRVMLCGST 237 (271)
T ss_dssp CHHHHHHHHSHHHHHTTCCCCCTTTEEEEEEECH
T ss_pred cccChHHhcchhhhhcccccCCCCCCEEEEECCH
Confidence 89998776531 1110 1134468899999986
No 31
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.75 E-value=1.7e-18 Score=110.27 Aligned_cols=87 Identities=9% Similarity=0.045 Sum_probs=63.7
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhCCCeEEEEEEeCCCC--------Cccc
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLTLYTAFSRDQE--------EKIT 72 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~~~~~~~~~~s~~~~--------~~g~ 72 (103)
|||||+||||++||++++.+++ . +++++ |+|+. +|++|.+||++|+. ++.+..+++.+.. .+|+
T Consensus 23 lIaGG~GiaPl~sm~~~l~~~~--~--~v~l~-g~R~~-~~~~~~~el~~l~~--~~~~~~~~~~~~~~~~d~~~g~~G~ 94 (142)
T 3lyu_A 23 AIGAYTGIVEVYPIAKAWQEIG--N--DVTTL-HVTFE-PMVILKEELEKAVT--RHIVEPVPLNPNQDFLANMKNVSQR 94 (142)
T ss_dssp EEEETTHHHHHHHHHHHHHHTT--C--EEEEE-EEEEG-GGCCSHHHHHTTSS--EEEEEEECCCTTSCHHHHHHHHHHH
T ss_pred EEECcCcHHHHHHHHHHHHhcC--C--cEEEE-EeCCH-HHhhHHHHHHHHHh--heEEEEeecccccCCCCCCCCCccc
Confidence 6899999999999999988753 2 39999 99999 89999999998764 3444444544321 3677
Q ss_pred hhHHHhhcHHhhccccCCCCcEEEEeecC
Q psy12843 73 NNLSFESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 73 v~~~l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
|++.+.+... ..+...+|+||+|
T Consensus 95 v~~~l~~~~~------~~~~~~vy~CGP~ 117 (142)
T 3lyu_A 95 LKEKVRELLE------SEDWDLVFMVGPV 117 (142)
T ss_dssp HHHHHHHHHH------SSCCSEEEEESCH
T ss_pred hhHHHHHhcc------cCCCCEEEEECCH
Confidence 7776654321 1245689999986
No 32
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.74 E-value=2.2e-18 Score=124.80 Aligned_cols=91 Identities=12% Similarity=0.173 Sum_probs=70.2
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhC-CCeEEEEEEeCCCC---------Cc
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQA-NQLTLYTAFSRDQE---------EK 70 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~-~~~~~~~~~s~~~~---------~~ 70 (103)
|||||||||||++|++++.. +..++ ++|+||+|+. +|++|.++|++++++ +++++++++|++++ ..
T Consensus 271 lIagGtGitP~~s~l~~l~~-~~~~~--v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 346 (403)
T 1cqx_A 271 LISGGVGLTPMVSMLKVALQ-APPRQ--VVFVHGARNS-AVHAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYDYP 346 (403)
T ss_dssp EEESSCCHHHHHHHHHHHTC-SSCCC--EEEEEEESCS-SSCHHHHHHHHHHHHCTTEEEEEEESSCCTTCCBTTTBSEE
T ss_pred EEEecccHhhHHHHHHHHHh-CCCCc--EEEEEEeCCh-hhCcHHHHHHHHHHhCCCcEEEEEECCCCcccccccccCcC
Confidence 69999999999999999986 33344 9999999999 799999999999876 88999999998653 13
Q ss_pred cchhHHHhhcHHhhccccCCCCcEEEEeecC
Q psy12843 71 ITNNLSFESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 71 g~v~~~l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
|+++... +...+..+++++|+||+|
T Consensus 347 G~i~~~~------l~~~~~~~~~~vyvCGp~ 371 (403)
T 1cqx_A 347 GLVDVKQ------IEKSILLPDADYYICGPI 371 (403)
T ss_dssp SSCCGGG------SHHHHCCTTCEEEEESSH
T ss_pred CCcCHHH------HhhccCCCCCEEEEeCCH
Confidence 5555321 111112237899999986
No 33
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.74 E-value=1.3e-18 Score=112.58 Aligned_cols=87 Identities=9% Similarity=0.045 Sum_probs=63.3
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhCCCeEEEEEEeCCCC--------Cccc
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLTLYTAFSRDQE--------EKIT 72 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~~~~~~~~~~s~~~~--------~~g~ 72 (103)
||||||||||++||++++.+++ .+ ++|+ |+|+. +|++|.+||++|+. ++.+..+++.+.. .+|+
T Consensus 28 lIaGG~GItPl~sm~~~l~~~~--~~--v~l~-g~r~~-~d~~~~~el~~l~~--~~~~~~v~~~~~~~~~~~~~g~~G~ 99 (158)
T 3lrx_A 28 AIGAYTGIVEVYPIAKAWQEIG--ND--VTTL-HVTFE-PMVILKEELEKAVT--RHIVEPVPLNPNQDFLANMKNVSQR 99 (158)
T ss_dssp EEEETTHHHHHHHHHHHHHHHT--CE--EEEE-EECBG-GGCCSHHHHHHHSS--EEEECCBCCCTTSCHHHHHHHHHHH
T ss_pred EEEccCcHHHHHHHHHHHHhcC--Cc--EEEE-EeCCH-HHhhHHHHHHHHHh--ceEEEEeeccccccCCCCCCCCccc
Confidence 6899999999999999987653 23 9999 99999 89999999999864 3444333443211 3678
Q ss_pred hhHHHhhcHHhhccccCCCCcEEEEeecC
Q psy12843 73 NNLSFESRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 73 v~~~l~~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
|++.+.+... ..+...+|+||+|
T Consensus 100 v~~~l~~~l~------~~~~~~vy~CGP~ 122 (158)
T 3lrx_A 100 LKEKVRELLE------SEDWDLVFMVGPV 122 (158)
T ss_dssp HHHHHHHHHH------HSCCSEEEEESCH
T ss_pred ccHHHHHhhc------cCCCCEEEEECCH
Confidence 8776654321 1245689999986
No 34
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.67 E-value=6.5e-17 Score=111.32 Aligned_cols=84 Identities=15% Similarity=0.213 Sum_probs=64.2
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhCCCeEEEEEEeCCC--CCccchhHHHh
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLTLYTAFSRDQ--EEKITNNLSFE 78 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~~~~~~~~~~s~~~--~~~g~v~~~l~ 78 (103)
||||||||||+++|++++.+++ . +++|+|++|+. +|++|.+||++++.. +++++ +++. ..+|+|++.+.
T Consensus 115 liagGtGitP~~s~l~~l~~~~--~--~v~l~~~~r~~-~~~~~~~el~~l~~~---~~~~~-~~~~~~~~~g~v~~~l~ 185 (262)
T 1ep3_B 115 IIGGGIGVPPLYELAKQLEKTG--C--QMTILLGFASE-NVKILENEFSNLKNV---TLKIA-TDDGSYGTKGHVGMLMN 185 (262)
T ss_dssp EEEEGGGSHHHHHHHHHHHHHT--C--EEEEEEEESSG-GGCCCHHHHHTSTTE---EEEEE-ETTCSSSEESCHHHHHH
T ss_pred EEECcCcHHHHHHHHHHHHHcC--C--eEEEEEEcCCH-HHhhhHHHHhhhccC---cEEEE-ECCCCCcceeehHHHHH
Confidence 6999999999999999998753 3 39999999999 799999999986532 34333 3332 24789998665
Q ss_pred hcHHhhccccCCCCcEEEEeecC
Q psy12843 79 SRVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 79 ~~~~~l~~~l~~~~~~~yvcg~p 101 (103)
+. +. ++..+|+||+|
T Consensus 186 ~~-------~~-~~~~vyvCGp~ 200 (262)
T 1ep3_B 186 EI-------DF-EVDALYTCGAP 200 (262)
T ss_dssp HC-------CS-CCSEEEEESCH
T ss_pred hh-------cc-CCCEEEEECCH
Confidence 42 22 36799999976
No 35
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.66 E-value=1.4e-16 Score=112.65 Aligned_cols=86 Identities=14% Similarity=0.150 Sum_probs=64.6
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhCCCeEEEEEEeCCC-CCccchhHHHhh
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLTLYTAFSRDQ-EEKITNNLSFES 79 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~~~~~~~~~~s~~~-~~~g~v~~~l~~ 79 (103)
|||||||||||++|++++..++. . +++|+|++|+. +|++|.+||++|+..++++++ +++++ ..+.++++.+.+
T Consensus 116 liagG~GItP~~s~l~~l~~~~~-~--~v~l~~~~r~~-~~~~~~~el~~l~~~~~~~~~--~~~~~~~g~~~~~~ll~~ 189 (321)
T 2pia_A 116 LVAGGIGITPMLSMARQLRAEGL-R--SFRLYYLTRDP-EGTAFFDELTSDEWRSDVKIH--HDHGDPTKAFDFWSVFEK 189 (321)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHCS-S--EEEEEEEESCG-GGCTTHHHHHSTTTTTTEEEE--ECTTCTTSCCCHHHHHSS
T ss_pred EEEecccHhHHHHHHHHHHHcCC-C--cEEEEEEECCh-hhhHHHHHHhcCccCCeEEEE--ECCCcccCccCHHHHhcc
Confidence 69999999999999999987653 3 49999999999 799999999988633667654 35443 134455554432
Q ss_pred cHHhhccccCCCCcEEEEeecC
Q psy12843 80 RVEAKIPYLGWDSTYIILIIRP 101 (103)
Q Consensus 80 ~~~~l~~~l~~~~~~~yvcg~p 101 (103)
. ..+.++|+||++
T Consensus 190 --------~-~~~~~vyvCGP~ 202 (321)
T 2pia_A 190 --------S-KPAQHVYCCGPQ 202 (321)
T ss_dssp --------C-CTTEEEEEESCH
T ss_pred --------c-CCCCEEEEECCH
Confidence 1 357899999986
No 36
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.16 E-value=4.3e-11 Score=81.96 Aligned_cols=82 Identities=6% Similarity=-0.039 Sum_probs=53.4
Q ss_pred CccccccHHHHHHHHHHHHhcccCCCceEEEEEeeccCCCccccHHHHHHHHhCCCeEEEEEEeCCCCCcc-chhHHHhh
Q psy12843 1 MVGPGTGIAPFRSYIHTRISNQTASAQRLHLFFGCRNQGADFYFNQEWQNAIQANQLTLYTAFSRDQEEKI-TNNLSFES 79 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g~r~~~~d~~~~~el~~~~~~~~~~~~~~~s~~~~~~g-~v~~~l~~ 79 (103)
|||||||||||++|++++.. .. ++++++++++. +|+... ...++++++.+.+++....| .+.+.+.
T Consensus 117 liagGtGitPi~s~l~~l~~---~~--~~~~~~~~~~~-~d~~~l------~~~~~~~v~~~~~~~~~~~g~~~~~~l~- 183 (252)
T 2gpj_A 117 LAGDMTALPAISVNLAKLPN---NA--VGYAVIEVLSE-ADIQPL------VHPEHVELHWVINPEADPEGRPLVERIA- 183 (252)
T ss_dssp EEEEGGGHHHHHHHHHHSCT---TC--EEEEEEEESSG-GGCCCC------CCCTEEEEEEEECSSCCTTCHHHHHHHT-
T ss_pred EEcchhhHHHHHHHHHhCCC---CC--cEEEEEEECCH-HHhhcc------cCCCCcEEEEEeCCCCCcccHHHHHHHH-
Confidence 68999999999999999843 12 38899999998 676532 12256777766665532112 2333322
Q ss_pred cHHhhccc-cCCCCcEEEEeecC
Q psy12843 80 RVEAKIPY-LGWDSTYIILIIRP 101 (103)
Q Consensus 80 ~~~~l~~~-l~~~~~~~yvcg~p 101 (103)
.+ +...+.++|+||++
T Consensus 184 ------~~~~~~~~~~vy~CGP~ 200 (252)
T 2gpj_A 184 ------QLPWLAGEPAVWIACEF 200 (252)
T ss_dssp ------TSCCCSSCEEEEEEEEH
T ss_pred ------hccCCCCCcEEEEEcCH
Confidence 22 22356789999986
No 37
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=73.96 E-value=2.3 Score=29.77 Aligned_cols=21 Identities=19% Similarity=0.251 Sum_probs=17.6
Q ss_pred cccccc--HHHHHHHHHHHHhcc
Q psy12843 2 VGPGTG--IAPFRSYIHTRISNQ 22 (103)
Q Consensus 2 Ia~GtG--iaP~~s~l~~~~~~~ 22 (103)
.||||| |.|.+++.+++.+++
T Consensus 8 ~~GGTgGHi~palala~~L~~~g 30 (365)
T 3s2u_A 8 MAGGTGGHVFPALACAREFQARG 30 (365)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHTT
T ss_pred EcCCCHHHHHHHHHHHHHHHhCC
Confidence 478897 889999999998754
No 38
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=46.54 E-value=4.9 Score=28.28 Aligned_cols=11 Identities=27% Similarity=0.721 Sum_probs=8.6
Q ss_pred cccccHHHHHH
Q psy12843 3 GPGTGIAPFRS 13 (103)
Q Consensus 3 a~GtGiaP~~s 13 (103)
|+|||.||+.+
T Consensus 93 GTGTGaAPVvA 103 (315)
T 3r4v_A 93 GSGSVLGPLIT 103 (315)
T ss_dssp SSHHHHHHHHH
T ss_pred ccccchHHHHH
Confidence 56788888876
No 39
>3kj0_B BCL-2-like protein 11; BH3, apoptosis, protein-peptide complex, alternative splicing, cytoplasm, developmental protein, differentiation; 1.70A {Homo sapiens} PDB: 2pqk_B
Probab=41.95 E-value=12 Score=16.21 Aligned_cols=17 Identities=24% Similarity=0.161 Sum_probs=10.7
Q ss_pred cccHHHHHHHHHHHHhc
Q psy12843 5 GTGIAPFRSYIHTRISN 21 (103)
Q Consensus 5 GtGiaP~~s~l~~~~~~ 21 (103)
|+|+.|=+-+.+++.+-
T Consensus 1 gs~~~PE~wiAqELRRI 17 (27)
T 3kj0_B 1 GSGGRPEIWYAQELRRI 17 (27)
T ss_dssp ---CCHHHHHHHHHHHH
T ss_pred CCCCCchhHHHHHHHHH
Confidence 67888888888887653
No 40
>2dnf_A Doublecortin domain-containing protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=40.06 E-value=12 Score=21.98 Aligned_cols=11 Identities=0% Similarity=0.102 Sum_probs=9.0
Q ss_pred CcEEEEeecCC
Q psy12843 92 STYIILIIRPE 102 (103)
Q Consensus 92 ~~~~yvcg~p~ 102 (103)
+.++|||+++|
T Consensus 79 dg~~YVa~g~E 89 (108)
T 2dnf_A 79 NGQFYVAVGRD 89 (108)
T ss_dssp SSCBEEEECSS
T ss_pred CCCEEEEeCCC
Confidence 56699999976
No 41
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=38.12 E-value=62 Score=19.39 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=22.5
Q ss_pred cHHHHHHHHhC-CCeEEEEEEeCCCCCccchhHHHhhcHH
Q psy12843 44 FNQEWQNAIQA-NQLTLYTAFSRDQEEKITNNLSFESRVE 82 (103)
Q Consensus 44 ~~~el~~~~~~-~~~~~~~~~s~~~~~~g~v~~~l~~~~~ 82 (103)
|++.+++..+. |.+.+.+.++.++ +-++.+.|.+..+
T Consensus 64 frenireiwerypqldvvvivttdd--kewikdfieeake 101 (162)
T 2l82_A 64 FRENIREIWERYPQLDVVVIVTTDD--KEWIKDFIEEAKE 101 (162)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEECCC--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcEEEEEecCc--HHHHHHHHHHHHh
Confidence 34445444444 8888666666654 6677777776443
No 42
>3arc_H Photosystem II reaction center protein H; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 3kzi_H* 3bz1_H* 1s5l_H* 2axt_H* 3bz2_H* 3prq_H* 3prr_H* 3a0b_H* 3a0h_H*
Probab=37.01 E-value=28 Score=18.64 Aligned_cols=18 Identities=28% Similarity=0.492 Sum_probs=15.0
Q ss_pred ccccccHHHHHHHHHHHH
Q psy12843 2 VGPGTGIAPFRSYIHTRI 19 (103)
Q Consensus 2 Ia~GtGiaP~~s~l~~~~ 19 (103)
+|.|=|-||+++..-.+.
T Consensus 20 vaPGWGTtplMgv~m~Lf 37 (65)
T 3arc_H 20 VAPGWGTTPLMAVFMGLF 37 (65)
T ss_dssp CBSTTTTHHHHHHHHHHH
T ss_pred ccCCccChhHHHHHHHHH
Confidence 578999999999877664
No 43
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=31.24 E-value=25 Score=24.76 Aligned_cols=17 Identities=24% Similarity=0.413 Sum_probs=13.5
Q ss_pred ccccccHHHHHHHHHHH
Q psy12843 2 VGPGTGIAPFRSYIHTR 18 (103)
Q Consensus 2 Ia~GtGiaP~~s~l~~~ 18 (103)
|+||||.+-+++=|+..
T Consensus 10 igGGtGl~~ll~gLk~~ 26 (326)
T 2q7x_A 10 IGGGTGSPVILXSLREX 26 (326)
T ss_dssp ECCCTTHHHHHHHHHHS
T ss_pred EcCcccHHHHHHHhccC
Confidence 78899988888777754
No 44
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=31.01 E-value=24 Score=25.01 Aligned_cols=18 Identities=22% Similarity=0.492 Sum_probs=14.6
Q ss_pred CccccccHHHHHHHHHHH
Q psy12843 1 MVGPGTGIAPFRSYIHTR 18 (103)
Q Consensus 1 lIa~GtGiaP~~s~l~~~ 18 (103)
.|+||||.+-+++=|+..
T Consensus 15 vigGGtGl~~ll~gLk~~ 32 (341)
T 2p0y_A 15 VIGGGTGLPVVLNGLRKQ 32 (341)
T ss_dssp EECCGGGHHHHHHHHHHS
T ss_pred EECCcccHHHHHHHHHhC
Confidence 378999999988877764
No 45
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=29.55 E-value=35 Score=14.62 Aligned_cols=13 Identities=31% Similarity=0.654 Sum_probs=9.5
Q ss_pred ccHHHHHHHHHHH
Q psy12843 6 TGIAPFRSYIHTR 18 (103)
Q Consensus 6 tGiaP~~s~l~~~ 18 (103)
+|+.|+.|.++..
T Consensus 11 ~~LP~liSWiK~k 23 (26)
T 3qrx_B 11 TGLPALISWIKRK 23 (26)
T ss_pred ccchHHHHHHHHH
Confidence 5677888887754
No 46
>2fhw_B Relaxin 3 (prorelaxin H3) (insulin-like peptide INSL7) (insulin-like peptide 7); insulin/relaxin super-family fold, signaling protein; NMR {Synthetic} PDB: 2k1v_B*
Probab=27.91 E-value=2.5 Score=18.89 Aligned_cols=8 Identities=13% Similarity=-0.147 Sum_probs=4.9
Q ss_pred EEEEeecC
Q psy12843 94 YIILIIRP 101 (103)
Q Consensus 94 ~~yvcg~p 101 (103)
.||+||++
T Consensus 18 ~I~vCG~s 25 (27)
T 2fhw_B 18 VIFTCGGS 25 (27)
T ss_dssp HHHHHTSS
T ss_pred HHHhhccc
Confidence 34577765
No 47
>1mg4_A Doublecortin, doublecortin-like kinase (N-terminal domain); DCX domain, microtubule bundling, cortex development, transferase; 1.50A {Homo sapiens} SCOP: d.15.11.1 PDB: 1mfw_A 1mjd_A 2bqq_A 2xrp_I*
Probab=27.51 E-value=31 Score=20.43 Aligned_cols=12 Identities=8% Similarity=-0.330 Sum_probs=9.7
Q ss_pred CCcEEEEeecCC
Q psy12843 91 DSTYIILIIRPE 102 (103)
Q Consensus 91 ~~~~~yvcg~p~ 102 (103)
.++..|||++.|
T Consensus 83 ~dG~~YVc~~~e 94 (113)
T 1mg4_A 83 VEGESYVCGSIE 94 (113)
T ss_dssp CTTCEEEEESSS
T ss_pred hCCCEEEEeCCC
Confidence 477899999865
No 48
>4ehx_A Tetraacyldisaccharide 4'-kinase; membrane protein, lipid A, P-loop, P-loop containing nucleoside triphosphate hydrolase; HET: EPE; 1.90A {Aquifex aeolicus} PDB: 4ehy_A* 4ehw_A
Probab=26.93 E-value=38 Score=23.46 Aligned_cols=19 Identities=21% Similarity=0.384 Sum_probs=16.4
Q ss_pred ccccccHHHHHHHHHHHHh
Q psy12843 2 VGPGTGIAPFRSYIHTRIS 20 (103)
Q Consensus 2 Ia~GtGiaP~~s~l~~~~~ 20 (103)
..||||=||+.-.|-..+.
T Consensus 45 tvGGTGKTP~vi~L~~~L~ 63 (315)
T 4ehx_A 45 SVGGSGKTSFVMYLADLLK 63 (315)
T ss_dssp BSSCCSHHHHHHHHHHHTT
T ss_pred EeCCCChHHHHHHHHHHHh
Confidence 4799999999998888775
No 49
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=25.43 E-value=21 Score=25.12 Aligned_cols=12 Identities=50% Similarity=0.786 Sum_probs=8.1
Q ss_pred cccccHHHHHHH
Q psy12843 3 GPGTGIAPFRSY 14 (103)
Q Consensus 3 a~GtGiaP~~s~ 14 (103)
++|||++|+++-
T Consensus 104 GTGSG~~~~ia~ 115 (338)
T 2r75_1 104 GTGTGAAPVIAK 115 (338)
T ss_dssp SHHHHHHHHHHH
T ss_pred CcCCCchHHHHH
Confidence 356789999443
No 50
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=25.31 E-value=55 Score=22.21 Aligned_cols=28 Identities=11% Similarity=0.207 Sum_probs=20.4
Q ss_pred cccHHHHHHHHHHHHhcccCCCceEEEEEe
Q psy12843 5 GTGIAPFRSYIHTRISNQTASAQRLHLFFG 34 (103)
Q Consensus 5 GtGiaP~~s~l~~~~~~~~~~~~~v~l~~g 34 (103)
|+|+|-++.+++.+........ +.+++.
T Consensus 129 aSG~a~lLE~ar~l~~~~~~~~--i~~~~~ 156 (309)
T 4fuu_A 129 ASGVGALLEIARLVNQQQPELG--IDIIFL 156 (309)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSE--EEEEEE
T ss_pred chhHHHHHHHHHHHhhcCCCCc--eEEEee
Confidence 6899999999998877654433 655544
No 51
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=23.84 E-value=17 Score=16.08 Aligned_cols=8 Identities=38% Similarity=1.032 Sum_probs=0.0
Q ss_pred ccccHHHH
Q psy12843 4 PGTGIAPF 11 (103)
Q Consensus 4 ~GtGiaP~ 11 (103)
+|+|++-|
T Consensus 2 agsgvtrf 9 (31)
T 4h62_V 2 AGSGVTRF 9 (31)
T ss_dssp --------
T ss_pred CCCccccc
Confidence 45555544
No 52
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=22.80 E-value=19 Score=25.16 Aligned_cols=11 Identities=55% Similarity=0.948 Sum_probs=7.8
Q ss_pred cccccHHHHHH
Q psy12843 3 GPGTGIAPFRS 13 (103)
Q Consensus 3 a~GtGiaP~~s 13 (103)
++|||.+|+++
T Consensus 108 GTGSG~~~~la 118 (320)
T 1ofu_A 108 GTGTGAAPIIA 118 (320)
T ss_dssp SHHHHHHHHHH
T ss_pred CccccHHHHHH
Confidence 35788889764
No 53
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=22.79 E-value=19 Score=26.18 Aligned_cols=11 Identities=55% Similarity=0.933 Sum_probs=8.0
Q ss_pred cccccHHHHHH
Q psy12843 3 GPGTGIAPFRS 13 (103)
Q Consensus 3 a~GtGiaP~~s 13 (103)
++|||.+|+++
T Consensus 114 GTGSGaapvIa 124 (396)
T 4dxd_A 114 GTGTGAAPVVA 124 (396)
T ss_dssp SHHHHHHHHHH
T ss_pred CccccHHHHHH
Confidence 45789999753
No 54
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=22.10 E-value=19 Score=25.80 Aligned_cols=11 Identities=45% Similarity=0.773 Sum_probs=7.7
Q ss_pred cccccHHHHHH
Q psy12843 3 GPGTGIAPFRS 13 (103)
Q Consensus 3 a~GtGiaP~~s 13 (103)
++|||++|++.
T Consensus 101 GTGSG~~pvLa 111 (360)
T 3v3t_A 101 GAGSGITPPIL 111 (360)
T ss_dssp HHHHHHHHHHH
T ss_pred CccccHHHHHH
Confidence 35788888854
No 55
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=21.59 E-value=21 Score=25.40 Aligned_cols=10 Identities=50% Similarity=0.933 Sum_probs=7.5
Q ss_pred cccccHHHHH
Q psy12843 3 GPGTGIAPFR 12 (103)
Q Consensus 3 a~GtGiaP~~ 12 (103)
++|||.+|++
T Consensus 118 GTGSG~ap~l 127 (353)
T 1w5f_A 118 GTGTGASPVI 127 (353)
T ss_dssp SHHHHHHHHH
T ss_pred CccccHHHHH
Confidence 3578888886
No 56
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=21.33 E-value=31 Score=25.03 Aligned_cols=9 Identities=22% Similarity=0.682 Sum_probs=6.1
Q ss_pred ccccHHHHH
Q psy12843 4 PGTGIAPFR 12 (103)
Q Consensus 4 ~GtGiaP~~ 12 (103)
+|||++|++
T Consensus 144 TGSG~~~~l 152 (426)
T 2btq_B 144 SGSGLGSLI 152 (426)
T ss_dssp TTTHHHHHH
T ss_pred ccccHHHHH
Confidence 456888874
No 57
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=21.15 E-value=21 Score=25.66 Aligned_cols=11 Identities=55% Similarity=0.921 Sum_probs=7.9
Q ss_pred cccccHHHHHH
Q psy12843 3 GPGTGIAPFRS 13 (103)
Q Consensus 3 a~GtGiaP~~s 13 (103)
++|||.+|+++
T Consensus 108 GTGSG~apvla 118 (382)
T 2vxy_A 108 GTGTGAAPVIA 118 (382)
T ss_dssp SHHHHHHHHHH
T ss_pred CCCCcHHHHHH
Confidence 35688999863
Done!