BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12849
(138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3T067|SCPDL_BOVIN Saccharopine dehydrogenase-like oxidoreductase OS=Bos taurus
GN=SCCPDH PE=2 SV=1
Length = 429
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 66/97 (68%)
Query: 36 VVNTINESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQY 95
+ + N +S+ MAK+ V+LNCVGPY +YGE V+KACIE T +DI+GEP F+E M +
Sbjct: 76 ICDITNPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGTSCIDISGEPQFLELMYW 135
Query: 96 EYNTRAQESEVCVVSACGIETLPIDMGVLMLQDSFEG 132
+Y+ +A E V ++ + G +++P D+GV+ ++ G
Sbjct: 136 KYHEKAAEKGVYIIGSSGFDSIPADLGVIYTRNKMNG 172
>sp|Q6AY30|SCPDL_RAT Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus
GN=Sccpdh PE=2 SV=1
Length = 429
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 62/92 (67%)
Query: 41 NESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTR 100
N +S+ MAKK ++LNCVGPY +YGE VVKACIE T +DI GEP F+E M +Y+ +
Sbjct: 81 NPASLDEMAKKATLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEPQFLELMHVKYHEK 140
Query: 101 AQESEVCVVSACGIETLPIDMGVLMLQDSFEG 132
A E V ++ + G +++P D+GVL ++ G
Sbjct: 141 AAEKGVYIIGSSGFDSIPADLGVLYTRNQMNG 172
>sp|Q8R127|SCPDL_MOUSE Saccharopine dehydrogenase-like oxidoreductase OS=Mus musculus
GN=Sccpdh PE=2 SV=1
Length = 429
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 74/117 (63%), Gaps = 5/117 (4%)
Query: 21 LQKASWFGVRTNRTTVVNTI-----NESSILIMAKKCRVILNCVGPYTWYGEAVVKACIE 75
L+KA+ R + ++ V I N +S+ MAK+ +++LNCVGPY +YGE VVKACIE
Sbjct: 56 LEKAAQKLGRPSLSSEVGVIICDISNPASLDEMAKQAKLVLNCVGPYRFYGEPVVKACIE 115
Query: 76 AKTHHVDITGEPYFMEYMQYEYNTRAQESEVCVVSACGIETLPIDMGVLMLQDSFEG 132
T +DI GEP F+E M +Y+ +A E V ++ + G +++P D+GVL ++ G
Sbjct: 116 NGTSCIDICGEPQFLELMHAKYHEKAAEKGVYIIGSSGFDSIPADLGVLYTRNQMNG 172
>sp|Q8NBX0|SCPDL_HUMAN Saccharopine dehydrogenase-like oxidoreductase OS=Homo sapiens
GN=SCCPDH PE=1 SV=1
Length = 429
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 69/114 (60%), Gaps = 11/114 (9%)
Query: 36 VVNTINESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQY 95
+ + N +S+ MAK+ V+LNCVGPY +YGE V+KACIE +DI+GEP F+E MQ
Sbjct: 76 ICDIANPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGASCIDISGEPQFLELMQL 135
Query: 96 EYNTRAQESEVCVVSACGIETLPIDMGVLMLQDSFEG-----------HSGKEN 138
+Y+ +A + V ++ + G +++P D+GV+ ++ G HSG E
Sbjct: 136 KYHEKAADKGVYIIGSSGFDSIPADLGVIYTRNKMNGTLTAVESFLTIHSGPEG 189
>sp|Q5R5C9|SCPDL_PONAB Saccharopine dehydrogenase-like oxidoreductase OS=Pongo abelii
GN=SCCPDH PE=2 SV=1
Length = 429
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 11/114 (9%)
Query: 36 VVNTINESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQY 95
+ + N +S+ MAK+ V+ NCVGPY +YGE V+KACIE +DI+GEP F+E MQ
Sbjct: 76 ICDIANPASLDEMAKQATVVPNCVGPYRFYGEPVIKACIENGASCIDISGEPQFLELMQL 135
Query: 96 EYNTRAQESEVCVVSACGIETLPIDMGVLMLQDSFEG-----------HSGKEN 138
+Y+ +A + V ++ + G +++P D+GV+ ++ G HSG E
Sbjct: 136 KYHEKAADKGVYIIGSSGFDSIPADLGVIYTRNKMNGTLTAVESFLTIHSGPEG 189
>sp|Q8LGI2|SCPDL_ARATH Probable mitochondrial saccharopine dehydrogenase-like
oxidoreductase At5g39410 OS=Arabidopsis thaliana
GN=At5g39410 PE=1 SV=2
Length = 454
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 61/87 (70%)
Query: 38 NTINESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEY 97
+T + S+ + + ++ILNCVGP+ +G+ VV AC ++ ++DI+GEP FME M+ Y
Sbjct: 78 DTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDYLDISGEPEFMERMEANY 137
Query: 98 NTRAQESEVCVVSACGIETLPIDMGVL 124
+ RA+E+ +VSACG +++P ++G+L
Sbjct: 138 HDRAEETGSLIVSACGFDSIPAELGLL 164
>sp|Q7D745|Y2525_MYCTU Putative trans-acting enoyl reductase MT2525 OS=Mycobacterium
tuberculosis GN=MT2525 PE=3 SV=2
Length = 419
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 43 SSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQ 102
S++ MA + +V++ VGPYT YG +V AC A T + D+TGEP FM Y+ +A
Sbjct: 71 STLQAMAARAQVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEPMFMRNSIDLYHKQAA 130
Query: 103 ESEVCVVSACGIETLPIDMGVLMLQDSFEGHSGKEN 138
++ +V ACG +++P D+ V L H+ +E+
Sbjct: 131 DTGARIVHACGFDSVPSDLSVYALY-----HAARED 161
>sp|O53176|Y2449_MYCTU Putative trans-acting enoyl reductase Rv2449c OS=Mycobacterium
tuberculosis GN=Rv2449c PE=1 SV=3
Length = 419
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 43 SSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQ 102
S++ MA + +V++ VGPYT YG +V AC A T + D+TGEP FM Y+ +A
Sbjct: 71 STLQAMAARAQVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEPMFMRNSIDLYHKQAA 130
Query: 103 ESEVCVVSACGIETLPIDMGVLMLQDSFEGHSGKEN 138
++ +V ACG +++P D+ V L H+ +E+
Sbjct: 131 DTGARIVHACGFDSVPSDLSVYALY-----HAARED 161
>sp|P95139|TAER_MYCTU Trans-acting enoyl reductase OS=Mycobacterium tuberculosis
GN=Rv2953 PE=1 SV=1
Length = 418
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 48 MAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVC 107
MA + +V+L VGPYT YG +V AC +A T + D+TGE F Y+ +A ++
Sbjct: 76 MAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGELMFCRNSIDLYHKQAADTGAR 135
Query: 108 VVSACGIETLPIDMGVLML-QDSFEGHSGK 136
++ ACG +++P D+ V L + S E +G+
Sbjct: 136 IILACGFDSIPSDLNVYQLYRRSVEDGTGE 165
>sp|A5U6W1|TAER_MYCTA Trans-acting enoyl reductase OS=Mycobacterium tuberculosis (strain
ATCC 25177 / H37Ra) GN=MRA_2980 PE=3 SV=1
Length = 418
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 48 MAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVC 107
MA + +V+L VGPYT YG +V AC +A T + D+TGE F Y+ +A ++
Sbjct: 76 MAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGELMFCRNSIDLYHKQAADTGAR 135
Query: 108 VVSACGIETLPIDMGVLML-QDSFEGHSGK 136
++ ACG +++P D+ V L + S E +G+
Sbjct: 136 IILACGFDSIPSDLNVYQLYRRSVEDGTGE 165
>sp|A1KMU7|TAER_MYCBP Trans-acting enoyl reductase OS=Mycobacterium bovis (strain BCG /
Pasteur 1173P2) GN=BCG_2974 PE=3 SV=1
Length = 418
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 48 MAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVC 107
MA + +V+L VGPYT YG +V AC +A T + D+TGE F Y+ +A ++
Sbjct: 76 MAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGELMFCRNSIDLYHKQAADTGAR 135
Query: 108 VVSACGIETLPIDMGVLML-QDSFEGHSGK 136
++ ACG +++P D+ V L + S E +G+
Sbjct: 136 IILACGFDSIPSDLNVYQLYRRSVEDGTGE 165
>sp|Q7TXK2|TAER_MYCBO Trans-acting enoyl reductase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb2977 PE=3 SV=1
Length = 418
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 48 MAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVC 107
MA + +V+L VGPYT YG +V AC +A T + D+TGE F Y+ +A ++
Sbjct: 76 MAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGELMFCRNSIDLYHKQAADTGAR 135
Query: 108 VVSACGIETLPIDMGVLML-QDSFEGHSGK 136
++ ACG +++P D+ V L + S E +G+
Sbjct: 136 IILACGFDSIPSDLNVYQLYRRSVEDGTGE 165
>sp|A0PQ21|TAER_MYCUA Trans-acting enoyl reductase OS=Mycobacterium ulcerans (strain
Agy99) GN=MUL_2000 PE=3 SV=1
Length = 418
Score = 63.2 bits (152), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 48 MAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVC 107
MA + +VIL VGPYT YG +V AC +A T + D+TGE F Y+ +A ++
Sbjct: 76 MATRAQVILTTVGPYTRYGLPLVAACAKAGTDYADLTGELMFCRNSIDLYHKQAADTGAR 135
Query: 108 VVSACGIETLPIDMGV 123
+V ACG +++P D+ V
Sbjct: 136 IVLACGFDSIPSDLNV 151
>sp|Q9CD87|TAER_MYCLE Trans-acting enoyl reductase OS=Mycobacterium leprae (strain TN)
GN=ML0129 PE=3 SV=1
Length = 418
Score = 58.9 bits (141), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 36 VVNTINESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQY 95
V + S++ MA + +V+L VGPYT YG +V AC T + D+TGE F
Sbjct: 64 VADASQPSTLEAMAGRAQVVLTTVGPYTRYGLPLVAACARTGTDYADLTGELMFCRNSID 123
Query: 96 EYNTRAQESEVCVVSACGIETLPIDMGVLML 126
++ +A + ++ ACG +++P D+ V L
Sbjct: 124 LHHKQAAATGARIILACGFDSVPSDLNVYQL 154
>sp|C4L559|MTNN_EXISA 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
GN=mtnN PE=3 SV=1
Length = 233
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 37 VNTINESSILIMAKKCRVILN--CVGPYTW---YGEAVVKACIEAKTHHVDITGEPYFME 91
VN +++LI K V++N G + G+ VV E + H VD+T Y E
Sbjct: 53 VNAAIGTTLLIDKFKPDVVINTGSAGGFKKGMKVGDVVVST--EVRHHDVDVTAFGY--E 108
Query: 92 YMQYEYNTRAQESEVCVVSACG--IETLP---IDMGVLMLQDSF 130
Y Q A E++ +VS C IE LP + G+++ DSF
Sbjct: 109 YGQVPGMPPAYEADAKLVSVCKDVIENLPDVNVHQGLIVTGDSF 152
>sp|Q9AJC6|LYSDH_GEOSE Lysine 6-dehydrogenase OS=Geobacillus stearothermophilus GN=lysDH
PE=1 SV=1
Length = 385
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 50 KKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVCVV 109
K V++N + + + E V K IE H VD+ G + E + RAQ + V ++
Sbjct: 68 KGHDVVVNAL--FYQFNETVAKTAIETGVHSVDLGGHIGHITDRVLELHERAQAAGVTII 125
Query: 110 SACGI 114
G+
Sbjct: 126 PDLGV 130
>sp|A3KMH1|VWA8_HUMAN von Willebrand factor A domain-containing protein 8 OS=Homo sapiens
GN=VWA8 PE=1 SV=2
Length = 1905
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 13/99 (13%)
Query: 33 RTTVVNTINESSILIMAKKCRVILN---CVGPYTWYG--------EAVVKACIEAKTHHV 81
R ++NT+++ I I AK V L + T+ G + K +THH+
Sbjct: 1013 REILINTLHKYGIPIGAKPTSVQLAKELTLPEQTFMGYWTIGQARSGMQKLLCPVETHHI 1072
Query: 82 DITGEPYFMEYMQYEYNTRAQESEVCVVSACGIETLPID 120
DI G P + +Y R +E + C +P+D
Sbjct: 1073 DIKG-PALINIQEYPIE-RHEERSLNFTEECASWRIPLD 1109
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,134,710
Number of Sequences: 539616
Number of extensions: 1513438
Number of successful extensions: 3058
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3043
Number of HSP's gapped (non-prelim): 19
length of query: 138
length of database: 191,569,459
effective HSP length: 103
effective length of query: 35
effective length of database: 135,989,011
effective search space: 4759615385
effective search space used: 4759615385
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)