Query psy1285
Match_columns 118
No_of_seqs 131 out of 1090
Neff 10.5
Searched_HMMs 29240
Date Fri Aug 16 21:21:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1285.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1285hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 99.8 1.4E-19 4.9E-24 120.4 12.3 100 6-110 144-270 (344)
2 2ynn_A Coatomer subunit beta'; 99.8 5.9E-19 2E-23 115.1 12.0 101 6-110 114-241 (304)
3 3ow8_A WD repeat-containing pr 99.8 6.9E-19 2.4E-23 115.8 11.4 98 6-108 181-301 (321)
4 1vyh_C Platelet-activating fac 99.8 1E-18 3.4E-23 118.3 11.0 97 6-107 125-244 (410)
5 2pbi_B Guanine nucleotide-bind 99.8 2.2E-18 7.6E-23 114.7 12.3 98 6-108 215-337 (354)
6 1got_B GT-beta; complex (GTP-b 99.8 2.2E-18 7.5E-23 114.0 12.2 98 6-108 201-323 (340)
7 2ynn_A Coatomer subunit beta'; 99.8 7.3E-19 2.5E-23 114.7 9.7 98 6-108 30-151 (304)
8 4gqb_B Methylosome protein 50; 99.8 2.3E-18 7.7E-23 114.6 12.0 103 6-109 98-226 (344)
9 3frx_A Guanine nucleotide-bind 99.8 4.3E-18 1.5E-22 111.8 12.1 98 6-108 82-207 (319)
10 1vyh_C Platelet-activating fac 99.8 5.7E-18 2E-22 114.6 11.2 98 6-108 167-287 (410)
11 3iz6_a 40S ribosomal protein R 99.8 6E-18 2.1E-22 113.4 11.1 99 6-108 223-355 (380)
12 3frx_A Guanine nucleotide-bind 99.8 7.7E-18 2.6E-22 110.6 10.5 102 6-108 35-159 (319)
13 4ery_A WD repeat-containing pr 99.8 2.4E-17 8.2E-22 107.3 12.5 98 6-108 40-160 (312)
14 4g56_B MGC81050 protein; prote 99.7 2.1E-17 7.3E-22 110.1 11.4 101 6-111 156-283 (357)
15 2hes_X YDR267CP; beta-propelle 99.7 2.1E-17 7.3E-22 108.9 11.0 103 6-108 75-208 (330)
16 4aow_A Guanine nucleotide-bind 99.7 3.1E-17 1.1E-21 107.2 11.7 102 6-107 56-225 (340)
17 1got_B GT-beta; complex (GTP-b 99.7 6.9E-17 2.3E-21 106.8 13.0 98 6-108 72-195 (340)
18 1erj_A Transcriptional repress 99.7 4.2E-17 1.4E-21 109.7 12.0 97 6-107 140-266 (393)
19 4e54_B DNA damage-binding prot 99.7 1.7E-17 5.9E-22 112.8 9.9 101 6-110 137-263 (435)
20 4ggc_A P55CDC, cell division c 99.7 6.3E-17 2.2E-21 104.9 11.7 59 6-69 40-100 (318)
21 3ow8_A WD repeat-containing pr 99.7 9E-17 3.1E-21 105.7 12.4 98 6-108 139-259 (321)
22 2xzm_R RACK1; ribosome, transl 99.7 8.5E-17 2.9E-21 106.4 12.1 97 6-108 93-224 (343)
23 3fm0_A Protein CIAO1; WDR39,SG 99.7 5E-17 1.7E-21 107.7 10.3 100 6-108 78-205 (345)
24 3dm0_A Maltose-binding peripla 99.7 7.2E-17 2.5E-21 115.2 11.7 98 6-108 447-572 (694)
25 2pm7_B Protein transport prote 99.7 2.7E-16 9.2E-21 102.2 12.7 100 6-108 26-156 (297)
26 2j04_B YDR362CP, TAU91; beta p 99.7 6E-17 2E-21 113.2 10.1 100 6-109 282-409 (524)
27 4gq1_A NUP37; propeller, trans 99.7 4.1E-18 1.4E-22 114.8 4.2 86 6-91 106-223 (393)
28 4ery_A WD repeat-containing pr 99.7 3E-16 1E-20 102.1 12.7 98 6-108 82-203 (312)
29 4g56_B MGC81050 protein; prote 99.7 3.1E-17 1.1E-21 109.4 8.2 104 6-110 110-239 (357)
30 3fm0_A Protein CIAO1; WDR39,SG 99.7 1.2E-16 4E-21 105.9 10.6 99 6-109 33-162 (345)
31 2pm7_B Protein transport prote 99.7 2.2E-16 7.6E-21 102.6 11.7 100 6-108 72-215 (297)
32 1erj_A Transcriptional repress 99.7 3E-16 1E-20 105.6 12.4 97 6-107 224-362 (393)
33 4gq1_A NUP37; propeller, trans 99.7 8E-17 2.7E-21 108.5 9.6 58 6-68 161-219 (393)
34 2xzm_R RACK1; ribosome, transl 99.7 3.3E-16 1.1E-20 103.6 12.3 104 6-109 44-174 (343)
35 4aow_A Guanine nucleotide-bind 99.7 2.5E-16 8.6E-21 102.9 11.6 98 6-108 190-317 (340)
36 2pbi_B Guanine nucleotide-bind 99.7 4.2E-16 1.4E-20 103.7 12.8 97 6-107 171-294 (354)
37 3iz6_a 40S ribosomal protein R 99.7 1.1E-16 3.7E-21 107.3 9.3 97 6-107 83-215 (380)
38 2hes_X YDR267CP; beta-propelle 99.7 6.8E-16 2.3E-20 101.7 12.4 100 6-108 29-164 (330)
39 3vl1_A 26S proteasome regulato 99.7 5.8E-16 2E-20 104.0 12.2 100 6-110 156-303 (420)
40 3dm0_A Maltose-binding peripla 99.7 6.1E-16 2.1E-20 110.4 12.5 103 6-108 400-528 (694)
41 2aq5_A Coronin-1A; WD40 repeat 99.7 7.7E-16 2.7E-20 103.4 11.5 102 6-108 52-187 (402)
42 2w18_A PALB2, fancn, partner a 99.7 1.3E-16 4.3E-21 106.2 7.5 98 6-108 198-337 (356)
43 1nr0_A Actin interacting prote 99.7 6.2E-16 2.1E-20 109.2 11.4 98 6-108 207-335 (611)
44 2aq5_A Coronin-1A; WD40 repeat 99.7 1.4E-15 4.7E-20 102.2 11.7 103 6-108 99-231 (402)
45 3dwl_C Actin-related protein 2 99.7 2.2E-16 7.7E-21 104.8 7.7 98 6-108 28-157 (377)
46 3bg1_A Protein SEC13 homolog; 99.7 5.5E-16 1.9E-20 101.6 9.2 101 6-109 76-224 (316)
47 3lrv_A PRE-mRNA-splicing facto 99.7 2.3E-15 7.9E-20 99.4 12.2 103 6-108 90-225 (343)
48 3sfz_A APAF-1, apoptotic pepti 99.7 1.6E-15 5.3E-20 113.5 12.6 98 6-108 632-754 (1249)
49 3gre_A Serine/threonine-protei 99.7 7E-16 2.4E-20 104.4 9.7 95 6-105 187-311 (437)
50 3bg1_A Protein SEC13 homolog; 99.7 8.8E-16 3E-20 100.6 9.5 100 6-108 30-161 (316)
51 3vl1_A 26S proteasome regulato 99.6 3.6E-15 1.2E-19 100.1 12.5 97 6-107 114-236 (420)
52 3k26_A Polycomb protein EED; W 99.6 1.1E-15 3.6E-20 100.6 9.4 83 6-93 90-199 (366)
53 1nr0_A Actin interacting prote 99.6 4.8E-15 1.6E-19 104.7 12.6 95 9-108 37-201 (611)
54 4gga_A P55CDC, cell division c 99.6 5.2E-15 1.8E-19 100.1 12.2 97 6-107 120-240 (420)
55 2ymu_A WD-40 repeat protein; u 99.6 3.9E-15 1.3E-19 103.6 11.5 96 6-108 443-560 (577)
56 4h5i_A Guanine nucleotide-exch 99.6 3.8E-15 1.3E-19 99.6 10.8 94 8-108 154-323 (365)
57 3v7d_B Cell division control p 99.6 7.5E-15 2.6E-19 100.0 11.7 98 6-108 178-321 (464)
58 3dwl_C Actin-related protein 2 99.6 5.3E-15 1.8E-19 98.2 10.2 101 6-108 117-262 (377)
59 4aez_A CDC20, WD repeat-contai 99.6 1.6E-14 5.6E-19 97.1 12.5 98 6-108 108-228 (401)
60 2j04_B YDR362CP, TAU91; beta p 99.6 3.7E-15 1.3E-19 104.2 9.5 102 6-108 230-366 (524)
61 4a11_B DNA excision repair pro 99.6 2.2E-14 7.6E-19 95.5 12.9 100 6-109 204-346 (408)
62 2xyi_A Probable histone-bindin 99.6 1.2E-14 4.1E-19 98.8 11.7 103 6-110 249-391 (430)
63 3f3f_A Nucleoporin SEH1; struc 99.6 1.3E-14 4.4E-19 94.3 11.2 102 6-108 28-178 (351)
64 3mkq_A Coatomer beta'-subunit; 99.6 5.2E-15 1.8E-19 106.5 9.9 97 6-107 30-150 (814)
65 3zwl_B Eukaryotic translation 99.6 2.6E-14 8.7E-19 93.9 12.4 58 6-68 49-106 (369)
66 1gxr_A ESG1, transducin-like e 99.6 4.1E-14 1.4E-18 92.0 13.2 98 9-108 70-194 (337)
67 3v7d_B Cell division control p 99.6 1.9E-14 6.4E-19 98.0 11.7 96 6-107 285-401 (464)
68 4aez_A CDC20, WD repeat-contai 99.6 3.3E-14 1.1E-18 95.6 12.8 101 6-111 191-317 (401)
69 1p22_A F-BOX/WD-repeat protein 99.6 3.4E-14 1.2E-18 96.4 12.6 94 6-106 148-265 (435)
70 4a11_B DNA excision repair pro 99.6 2E-14 6.9E-19 95.7 11.2 100 6-110 61-199 (408)
71 3vu4_A KMHSV2; beta-propeller 99.6 1.4E-14 4.9E-19 96.4 10.3 82 7-88 155-273 (355)
72 3jrp_A Fusion protein of prote 99.6 1.3E-14 4.5E-19 95.7 10.0 100 6-108 28-158 (379)
73 3ei3_B DNA damage-binding prot 99.6 1.6E-14 5.4E-19 96.3 10.4 99 6-110 91-217 (383)
74 3lrv_A PRE-mRNA-splicing facto 99.6 2.1E-14 7.1E-19 94.8 10.5 83 6-94 144-252 (343)
75 3jrp_A Fusion protein of prote 99.6 3E-14 1E-18 94.0 11.2 98 6-108 74-217 (379)
76 3gre_A Serine/threonine-protei 99.6 8E-15 2.7E-19 99.2 8.5 102 6-108 81-225 (437)
77 2ovr_B FBW7, F-BOX/WD repeat p 99.6 3.7E-14 1.3E-18 96.3 11.6 93 6-105 134-247 (445)
78 1p22_A F-BOX/WD-repeat protein 99.6 7.5E-14 2.5E-18 94.8 13.1 94 6-106 188-305 (435)
79 3odt_A Protein DOA1; ubiquitin 99.6 6.6E-14 2.3E-18 90.3 12.2 95 6-107 34-152 (313)
80 2xyi_A Probable histone-bindin 99.6 7.1E-14 2.4E-18 94.9 12.8 105 6-110 199-334 (430)
81 1r5m_A SIR4-interacting protei 99.6 4.7E-14 1.6E-18 94.2 11.7 98 6-108 222-341 (425)
82 1sq9_A Antiviral protein SKI8; 99.6 4E-14 1.4E-18 94.3 11.4 98 6-108 202-365 (397)
83 3mmy_A MRNA export factor; mRN 99.6 5.2E-14 1.8E-18 92.4 11.7 89 6-97 59-171 (368)
84 1gxr_A ESG1, transducin-like e 99.6 6.4E-14 2.2E-18 91.1 11.6 97 6-108 158-276 (337)
85 3zwl_B Eukaryotic translation 99.6 1.1E-13 3.6E-18 91.0 12.6 99 6-108 192-326 (369)
86 2pm9_A Protein WEB1, protein t 99.6 3.5E-14 1.2E-18 95.0 10.4 103 6-109 84-226 (416)
87 1k8k_C P40, ARP2/3 complex 41 99.6 2.6E-14 8.9E-19 94.3 9.5 98 6-108 25-153 (372)
88 4e54_B DNA damage-binding prot 99.6 3.2E-14 1.1E-18 96.7 10.2 85 6-96 226-337 (435)
89 2ymu_A WD-40 repeat protein; u 99.6 6.5E-14 2.2E-18 97.4 11.8 96 6-108 402-519 (577)
90 2ovr_B FBW7, F-BOX/WD repeat p 99.6 8.6E-14 3E-18 94.5 11.9 94 6-106 254-371 (445)
91 3i2n_A WD repeat-containing pr 99.5 8.5E-14 2.9E-18 91.3 11.2 96 6-107 85-219 (357)
92 3k26_A Polycomb protein EED; W 99.5 5.5E-14 1.9E-18 92.3 10.0 98 6-108 39-172 (366)
93 3jro_A Fusion protein of prote 99.5 5.1E-14 1.7E-18 101.7 10.5 100 6-108 26-156 (753)
94 2oit_A Nucleoporin 214KDA; NH2 99.5 4.7E-14 1.6E-18 96.5 9.7 102 6-108 113-251 (434)
95 1k8k_C P40, ARP2/3 complex 41 99.5 1.4E-13 4.9E-18 90.8 11.6 101 6-108 113-255 (372)
96 3jro_A Fusion protein of prote 99.5 7.5E-14 2.6E-18 100.9 11.0 100 6-108 72-215 (753)
97 2pm9_A Protein WEB1, protein t 99.5 8.5E-14 2.9E-18 93.1 10.6 99 6-109 183-317 (416)
98 1r5m_A SIR4-interacting protei 99.5 4.1E-14 1.4E-18 94.5 8.8 98 6-109 264-406 (425)
99 3mmy_A MRNA export factor; mRN 99.5 1.5E-13 5.1E-18 90.2 11.3 57 6-68 103-161 (368)
100 2oaj_A Protein SNI1; WD40 repe 99.5 5E-14 1.7E-18 103.7 9.7 96 6-108 34-162 (902)
101 3odt_A Protein DOA1; ubiquitin 99.5 1.2E-13 4.2E-18 89.1 10.1 95 6-108 160-277 (313)
102 3ei3_B DNA damage-binding prot 99.5 1.8E-13 6.3E-18 91.1 10.8 95 6-107 136-260 (383)
103 1pgu_A Actin interacting prote 99.5 2.1E-13 7.3E-18 95.1 11.1 100 6-110 461-597 (615)
104 3dw8_B Serine/threonine-protei 99.5 1.2E-13 4.1E-18 93.3 9.5 103 6-109 45-238 (447)
105 3dw8_B Serine/threonine-protei 99.5 1.3E-13 4.5E-18 93.1 9.5 75 33-108 174-296 (447)
106 4h5i_A Guanine nucleotide-exch 99.5 5.5E-14 1.9E-18 93.9 7.5 58 6-68 286-344 (365)
107 3f3f_A Nucleoporin SEH1; struc 99.5 4.9E-13 1.7E-17 86.8 11.7 104 6-109 76-226 (351)
108 3mkq_A Coatomer beta'-subunit; 99.5 3.1E-13 1.1E-17 97.3 11.7 97 6-107 72-194 (814)
109 3i2n_A WD repeat-containing pr 99.5 6.3E-13 2.2E-17 87.1 12.2 98 10-112 43-179 (357)
110 4gga_A P55CDC, cell division c 99.5 7.4E-13 2.5E-17 89.6 12.8 59 6-68 204-262 (420)
111 2oaj_A Protein SNI1; WD40 repe 99.5 4.2E-13 1.4E-17 98.8 11.8 96 6-108 74-222 (902)
112 2vdu_B TRNA (guanine-N(7)-)-me 99.5 1.6E-12 5.3E-17 88.7 12.4 96 6-106 120-250 (450)
113 2j04_A TAU60, YPL007P, hypothe 99.5 8E-13 2.7E-17 93.0 10.7 97 6-105 146-273 (588)
114 3vu4_A KMHSV2; beta-propeller 99.5 2.7E-13 9.1E-18 90.2 8.0 58 6-68 212-272 (355)
115 2vdu_B TRNA (guanine-N(7)-)-me 99.5 1.7E-12 5.9E-17 88.5 12.0 95 6-107 215-364 (450)
116 4ggc_A P55CDC, cell division c 99.4 3.1E-13 1.1E-17 87.4 7.9 57 8-69 261-317 (318)
117 3sfz_A APAF-1, apoptotic pepti 99.4 4.4E-13 1.5E-17 100.4 9.3 98 6-108 978-1096(1249)
118 2j04_A TAU60, YPL007P, hypothe 99.4 1.3E-12 4.3E-17 92.0 10.8 93 6-106 102-235 (588)
119 1pgu_A Actin interacting prote 99.4 1.5E-12 5E-17 90.9 10.6 94 6-105 224-347 (615)
120 1sq9_A Antiviral protein SKI8; 99.4 2.4E-12 8.2E-17 85.7 10.3 103 6-108 86-244 (397)
121 1yfq_A Cell cycle arrest prote 99.4 1.2E-11 4.2E-16 80.7 12.7 96 6-104 165-301 (342)
122 1yfq_A Cell cycle arrest prote 99.4 3.8E-12 1.3E-16 83.1 9.9 95 6-107 74-203 (342)
123 2w18_A PALB2, fancn, partner a 99.4 1.2E-12 4E-17 87.3 6.2 56 6-66 300-356 (356)
124 1l0q_A Surface layer protein; 99.3 4.5E-11 1.5E-15 79.6 10.7 96 6-108 7-126 (391)
125 3bws_A Protein LP49; two-domai 99.2 4.1E-11 1.4E-15 80.7 8.0 96 6-107 139-263 (433)
126 1l0q_A Surface layer protein; 99.2 3.2E-10 1.1E-14 75.4 10.7 96 6-108 49-168 (391)
127 2oit_A Nucleoporin 214KDA; NH2 99.2 2.2E-10 7.5E-15 78.4 9.3 56 6-66 167-222 (434)
128 2hqs_A Protein TOLB; TOLB, PAL 99.2 5.8E-10 2E-14 75.7 11.0 91 11-108 159-277 (415)
129 3bws_A Protein LP49; two-domai 99.2 4.7E-10 1.6E-14 75.6 10.4 97 6-108 186-313 (433)
130 2ojh_A Uncharacterized protein 98.8 7.6E-08 2.6E-12 61.0 10.3 55 6-67 17-71 (297)
131 1nir_A Nitrite reductase; hemo 98.8 1.3E-07 4.5E-12 66.4 12.1 83 6-94 154-265 (543)
132 1xfd_A DIP, dipeptidyl aminope 98.8 1E-07 3.6E-12 68.1 11.0 79 8-92 34-149 (723)
133 2hqs_A Protein TOLB; TOLB, PAL 98.7 1.9E-07 6.5E-12 63.3 10.2 93 12-111 292-411 (415)
134 3u4y_A Uncharacterized protein 98.6 1E-06 3.5E-11 57.2 12.0 96 6-108 15-138 (331)
135 2ojh_A Uncharacterized protein 98.6 3.1E-07 1.1E-11 58.1 8.4 99 6-108 146-282 (297)
136 1nir_A Nitrite reductase; hemo 98.6 5.6E-07 1.9E-11 63.3 9.7 96 7-106 298-429 (543)
137 1k32_A Tricorn protease; prote 98.6 1.2E-06 3.9E-11 65.6 11.6 91 10-107 357-481 (1045)
138 1ri6_A Putative isomerase YBHE 98.5 3.1E-07 1.1E-11 59.6 7.1 75 8-85 12-114 (343)
139 3vgz_A Uncharacterized protein 98.5 2.3E-06 7.9E-11 55.8 11.1 95 7-107 202-323 (353)
140 3vgz_A Uncharacterized protein 98.5 3.4E-06 1.2E-10 55.0 11.8 95 8-107 108-240 (353)
141 1z68_A Fibroblast activation p 98.5 4.4E-07 1.5E-11 65.0 7.6 78 8-90 33-143 (719)
142 2ecf_A Dipeptidyl peptidase IV 98.5 1.2E-06 4.1E-11 62.8 9.7 74 12-91 65-186 (741)
143 1pby_B Quinohemoprotein amine 98.4 2.6E-06 8.9E-11 55.1 9.5 96 6-107 6-144 (337)
144 1pby_B Quinohemoprotein amine 98.3 5.4E-06 1.8E-10 53.6 9.5 76 12-94 220-318 (337)
145 3u4y_A Uncharacterized protein 98.3 8.9E-06 3E-10 52.7 10.3 75 9-88 60-162 (331)
146 3o4h_A Acylamino-acid-releasin 98.3 1E-05 3.4E-10 56.8 11.2 68 11-84 175-274 (582)
147 1ri6_A Putative isomerase YBHE 98.3 3.6E-06 1.2E-10 54.5 8.4 75 10-86 59-160 (343)
148 1xip_A Nucleoporin NUP159; bet 98.3 1.4E-05 4.9E-10 54.2 10.8 93 8-107 103-223 (388)
149 1jmx_B Amine dehydrogenase; ox 98.3 4.6E-06 1.6E-10 54.2 8.1 57 6-67 16-74 (349)
150 1xip_A Nucleoporin NUP159; bet 98.3 4.4E-06 1.5E-10 56.6 7.9 94 7-109 54-174 (388)
151 2z3z_A Dipeptidyl aminopeptida 98.2 6.4E-06 2.2E-10 58.9 8.1 53 8-67 98-150 (706)
152 2ecf_A Dipeptidyl peptidase IV 98.2 2.8E-05 9.6E-10 55.8 11.2 52 10-67 128-181 (741)
153 3o4h_A Acylamino-acid-releasin 98.2 1.8E-06 6.1E-11 60.6 4.7 87 9-104 130-244 (582)
154 3scy_A Hypothetical bacterial 98.1 2.6E-05 9E-10 51.3 9.2 95 9-106 231-360 (361)
155 1xfd_A DIP, dipeptidyl aminope 98.1 1.7E-05 5.9E-10 56.7 8.1 52 10-67 90-143 (723)
156 3pe7_A Oligogalacturonate lyas 98.0 2.4E-05 8.1E-10 51.8 7.8 53 12-69 61-113 (388)
157 1k32_A Tricorn protease; prote 98.0 3.3E-05 1.1E-09 57.8 9.2 92 10-108 316-431 (1045)
158 3hfq_A Uncharacterized protein 98.0 5.3E-05 1.8E-09 49.5 9.1 54 10-66 62-116 (347)
159 3scy_A Hypothetical bacterial 98.0 8.5E-05 2.9E-09 48.9 9.9 56 9-67 175-242 (361)
160 2z3z_A Dipeptidyl aminopeptida 98.0 3.5E-05 1.2E-09 55.1 8.5 48 37-86 82-150 (706)
161 3hfq_A Uncharacterized protein 98.0 9.3E-05 3.2E-09 48.4 9.9 96 8-107 159-295 (347)
162 1z68_A Fibroblast activation p 98.0 1.2E-05 4.1E-10 57.6 5.6 49 10-67 89-139 (719)
163 2oiz_A Aromatic amine dehydrog 97.9 0.00011 3.6E-09 49.0 8.5 78 8-92 28-146 (361)
164 4a5s_A Dipeptidyl peptidase 4 97.8 3.9E-05 1.3E-09 55.5 5.9 77 9-90 34-145 (740)
165 1qks_A Cytochrome CD1 nitrite 97.7 0.00075 2.6E-08 47.9 11.2 82 7-94 173-283 (567)
166 1jmx_B Amine dehydrogenase; ox 97.7 9.5E-05 3.3E-09 47.9 6.1 53 10-68 274-326 (349)
167 3pe7_A Oligogalacturonate lyas 97.7 0.00099 3.4E-08 44.0 10.9 69 26-94 20-119 (388)
168 4a5s_A Dipeptidyl peptidase 4 97.7 0.00063 2.2E-08 49.3 10.3 50 11-67 92-141 (740)
169 2hz6_A Endoplasmic reticulum t 97.6 9.5E-05 3.3E-09 49.5 4.8 82 6-94 14-119 (369)
170 1q7f_A NHL, brain tumor CG1071 97.6 0.0012 4.2E-08 41.9 9.8 53 8-66 182-237 (286)
171 2oiz_A Aromatic amine dehydrog 97.5 0.00025 8.6E-09 47.2 6.5 50 11-68 286-335 (361)
172 3fvz_A Peptidyl-glycine alpha- 97.5 0.0021 7.2E-08 42.0 10.7 92 9-106 164-300 (329)
173 3c5m_A Oligogalacturonate lyas 97.5 0.00051 1.7E-08 45.3 7.6 53 11-69 60-113 (396)
174 3azo_A Aminopeptidase; POP fam 97.4 0.00055 1.9E-08 48.6 7.2 33 35-67 128-170 (662)
175 1jof_A Carboxy-CIS,CIS-muconat 97.4 0.0021 7.2E-08 42.5 9.2 54 9-66 117-175 (365)
176 1q7f_A NHL, brain tumor CG1071 97.3 0.0054 1.9E-07 38.8 10.6 52 9-66 140-193 (286)
177 2dg1_A DRP35, lactonase; beta 97.3 0.0036 1.2E-07 40.5 9.8 52 8-67 24-75 (333)
178 3e5z_A Putative gluconolactona 97.3 0.01 3.6E-07 37.8 11.8 53 8-67 47-99 (296)
179 3azo_A Aminopeptidase; POP fam 97.3 0.0048 1.6E-07 43.8 10.8 53 11-65 217-272 (662)
180 2bkl_A Prolyl endopeptidase; m 97.2 0.0028 9.5E-08 45.6 8.8 35 34-68 118-157 (695)
181 2xdw_A Prolyl endopeptidase; a 97.2 0.0032 1.1E-07 45.4 9.1 51 12-68 152-218 (710)
182 2gop_A Trilobed protease; beta 97.2 0.0032 1.1E-07 40.9 8.2 50 9-68 41-95 (347)
183 2hz6_A Endoplasmic reticulum t 97.1 0.0007 2.4E-08 45.2 4.6 79 7-94 98-200 (369)
184 3dsm_A Uncharacterized protein 97.0 0.0096 3.3E-07 38.9 9.4 81 8-94 61-169 (328)
185 1rwi_B Serine/threonine-protei 97.0 0.0088 3E-07 37.4 8.8 54 10-68 170-223 (270)
186 3no2_A Uncharacterized protein 96.9 0.011 3.8E-07 37.9 8.6 53 6-65 10-63 (276)
187 1rwi_B Serine/threonine-protei 96.8 0.037 1.3E-06 34.5 10.8 74 10-89 86-183 (270)
188 2bkl_A Prolyl endopeptidase; m 96.8 0.0064 2.2E-07 43.7 7.8 52 10-68 146-212 (695)
189 3fvz_A Peptidyl-glycine alpha- 96.8 0.0066 2.3E-07 39.6 7.3 54 9-67 266-322 (329)
190 3g4e_A Regucalcin; six bladed 96.7 0.055 1.9E-06 34.7 11.6 72 35-106 147-249 (297)
191 3c5m_A Oligogalacturonate lyas 96.5 0.018 6.3E-07 37.8 8.1 65 26-90 20-115 (396)
192 2xdw_A Prolyl endopeptidase; a 96.5 0.014 4.9E-07 42.0 7.8 35 35-69 123-162 (710)
193 2dg1_A DRP35, lactonase; beta 96.4 0.028 9.7E-07 36.2 8.1 55 8-67 63-121 (333)
194 3e5z_A Putative gluconolactona 96.2 0.12 4E-06 32.9 11.6 72 32-106 167-264 (296)
195 3sjl_D Methylamine dehydrogena 96.2 0.041 1.4E-06 37.3 8.2 78 10-94 58-177 (386)
196 3dsm_A Uncharacterized protein 96.1 0.093 3.2E-06 34.2 9.6 76 11-94 203-309 (328)
197 1jof_A Carboxy-CIS,CIS-muconat 96.0 0.034 1.2E-06 36.7 7.3 53 10-65 166-222 (365)
198 1kb0_A Quinohemoprotein alcoho 96.0 0.058 2E-06 39.0 8.9 37 58-94 457-515 (677)
199 3sjl_D Methylamine dehydrogena 95.9 0.043 1.5E-06 37.3 7.3 72 10-86 108-208 (386)
200 2gop_A Trilobed protease; beta 95.7 0.022 7.6E-07 36.9 5.4 38 12-56 86-123 (347)
201 2mad_H Methylamine dehydrogena 95.7 0.055 1.9E-06 36.3 7.2 53 11-69 298-352 (373)
202 3no2_A Uncharacterized protein 95.6 0.22 7.6E-06 31.8 10.3 80 8-94 53-162 (276)
203 1yiq_A Quinohemoprotein alcoho 95.6 0.16 5.4E-06 36.9 9.8 38 57-94 454-513 (689)
204 1yr2_A Prolyl oligopeptidase; 95.6 0.4 1.4E-05 34.8 11.7 56 10-68 242-304 (741)
205 1yr2_A Prolyl oligopeptidase; 95.4 0.075 2.6E-06 38.6 7.6 50 11-67 189-252 (741)
206 1qks_A Cytochrome CD1 nitrite 95.4 0.44 1.5E-05 33.9 11.1 60 7-70 214-278 (567)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 95.2 0.14 4.8E-06 32.5 7.7 54 9-67 245-299 (314)
208 3nok_A Glutaminyl cyclase; bet 95.2 0.18 6.2E-06 32.6 7.9 81 6-94 70-172 (268)
209 2mad_H Methylamine dehydrogena 95.0 0.36 1.2E-05 32.3 9.4 74 10-90 96-199 (373)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 94.9 0.18 6.3E-06 31.9 7.7 60 9-68 196-257 (314)
211 3c75_H MADH, methylamine dehyd 94.0 0.39 1.3E-05 33.0 7.9 77 11-94 99-217 (426)
212 3c75_H MADH, methylamine dehyd 94.0 0.24 8.3E-06 34.0 6.9 54 10-69 349-404 (426)
213 1mda_H Methylamine dehydrogena 94.0 0.16 5.6E-06 34.1 5.9 52 12-69 295-348 (368)
214 1mda_H Methylamine dehydrogena 93.5 0.16 5.4E-06 34.2 5.2 50 12-68 47-106 (368)
215 3nol_A Glutamine cyclotransfer 93.3 0.88 3E-05 29.2 8.2 78 11-94 65-163 (262)
216 3dr2_A Exported gluconolactona 93.3 0.97 3.3E-05 28.8 10.2 32 35-66 186-223 (305)
217 3nol_A Glutamine cyclotransfer 93.0 1 3.5E-05 29.0 8.1 78 9-94 105-209 (262)
218 2z2n_A Virginiamycin B lyase; 93.0 1 3.4E-05 28.1 10.3 52 10-66 35-86 (299)
219 3iuj_A Prolyl endopeptidase; h 92.9 0.44 1.5E-05 34.4 7.0 35 35-69 127-166 (693)
220 3q7m_A Lipoprotein YFGL, BAMB; 92.3 1.6 5.3E-05 28.6 9.4 47 48-94 103-170 (376)
221 2z2n_A Virginiamycin B lyase; 91.5 1.6 5.4E-05 27.1 10.7 50 10-65 119-169 (299)
222 3g4e_A Regucalcin; six bladed 91.4 0.73 2.5E-05 29.4 6.1 61 9-69 169-231 (297)
223 1yiq_A Quinohemoprotein alcoho 91.3 0.53 1.8E-05 34.2 5.9 55 10-70 454-508 (689)
224 3nok_A Glutaminyl cyclase; bet 91.0 1.8 6.2E-05 27.9 7.6 54 9-70 114-167 (268)
225 1flg_A Protein (quinoprotein e 90.4 3.6 0.00012 29.3 10.0 38 57-94 465-524 (582)
226 2ad6_A Methanol dehydrogenase 90.0 2.7 9.2E-05 29.8 8.4 38 57-94 443-502 (571)
227 3mbr_X Glutamine cyclotransfer 89.7 2.7 9.1E-05 26.7 9.6 77 11-94 43-141 (243)
228 3hrp_A Uncharacterized protein 89.5 3.5 0.00012 27.8 10.1 51 9-66 150-202 (409)
229 2iwa_A Glutamine cyclotransfer 89.4 2.4 8.3E-05 27.2 7.2 56 39-94 23-103 (266)
230 3mbr_X Glutamine cyclotransfer 89.2 2.9 0.0001 26.5 9.7 78 9-94 83-187 (243)
231 3dr2_A Exported gluconolactona 88.6 3 0.0001 26.5 7.4 50 10-66 66-115 (305)
232 2qc5_A Streptogramin B lactona 87.8 3.4 0.00012 25.6 10.6 53 9-66 39-91 (300)
233 3iuj_A Prolyl endopeptidase; h 87.4 6.5 0.00022 28.4 11.9 57 11-68 208-269 (693)
234 2iwa_A Glutamine cyclotransfer 87.2 3.2 0.00011 26.6 6.7 79 9-94 84-189 (266)
235 2qe8_A Uncharacterized protein 87.0 3.3 0.00011 26.9 6.9 34 34-67 64-102 (343)
236 1fwx_A Nitrous oxide reductase 86.7 1.5 5.2E-05 31.5 5.4 54 11-68 254-309 (595)
237 3q7m_A Lipoprotein YFGL, BAMB; 86.7 4.9 0.00017 26.2 10.8 78 8-94 246-345 (376)
238 1kb0_A Quinohemoprotein alcoho 86.6 1.2 4.1E-05 32.3 5.0 55 10-70 456-510 (677)
239 1kv9_A Type II quinohemoprotei 86.3 3.1 0.00011 30.1 6.9 38 57-94 437-496 (668)
240 2ghs_A AGR_C_1268P; regucalcin 85.9 5.2 0.00018 25.8 12.2 70 36-106 178-279 (326)
241 2qe8_A Uncharacterized protein 85.5 5.6 0.00019 25.8 7.5 26 38-63 196-222 (343)
242 2qc5_A Streptogramin B lactona 84.9 5.1 0.00017 24.8 11.0 52 10-66 82-133 (300)
243 3hrp_A Uncharacterized protein 84.1 7.6 0.00026 26.2 7.8 32 37-68 323-355 (409)
244 2ghs_A AGR_C_1268P; regucalcin 82.6 7.6 0.00026 25.0 7.7 57 10-66 200-259 (326)
245 2ece_A 462AA long hypothetical 82.4 10 0.00036 26.5 10.4 61 7-69 102-175 (462)
246 3pbp_A Nucleoporin NUP82; beta 82.4 10 0.00035 26.4 9.5 54 7-66 37-94 (452)
247 3pbp_A Nucleoporin NUP82; beta 81.2 3 0.0001 29.0 4.8 32 36-67 124-158 (452)
248 4gq2_M Nucleoporin NUP120; bet 80.6 3.5 0.00012 31.3 5.4 33 38-70 237-269 (950)
249 1w6s_A Methanol dehydrogenase 78.9 16 0.00053 26.3 10.0 24 71-94 488-511 (599)
250 1kv9_A Type II quinohemoprotei 75.5 4.8 0.00017 29.1 4.8 56 9-70 436-491 (668)
251 1k3i_A Galactose oxidase precu 68.3 30 0.001 24.8 8.2 53 12-67 220-274 (656)
252 2ad6_A Methanol dehydrogenase 67.6 9.7 0.00033 27.0 4.8 56 9-70 442-497 (571)
253 2ece_A 462AA long hypothetical 65.4 29 0.00099 24.3 6.6 49 9-62 226-284 (462)
254 1npe_A Nidogen, entactin; glyc 63.0 24 0.00081 21.7 10.0 58 37-94 167-246 (267)
255 1flg_A Protein (quinoprotein e 61.8 13 0.00045 26.4 4.6 56 9-70 464-519 (582)
256 3hxj_A Pyrrolo-quinoline quino 61.3 27 0.00093 21.8 8.3 50 10-66 116-165 (330)
257 4fhn_B Nucleoporin NUP120; pro 60.6 5.7 0.00019 30.7 2.7 31 40-70 241-271 (1139)
258 1npe_A Nidogen, entactin; glyc 59.0 28 0.00097 21.3 10.2 59 9-67 8-67 (267)
259 3f7f_A Nucleoporin NUP120; nuc 57.9 17 0.00058 27.0 4.6 30 38-69 223-252 (729)
260 4gq2_M Nucleoporin NUP120; bet 57.5 28 0.00097 26.5 5.9 22 71-92 251-272 (950)
261 3hxj_A Pyrrolo-quinoline quino 57.4 33 0.0011 21.5 7.7 27 37-64 215-241 (330)
262 4fhn_B Nucleoporin NUP120; pro 56.4 22 0.00076 27.6 5.2 22 71-92 253-274 (1139)
263 2fp8_A Strictosidine synthase; 55.9 36 0.0012 21.6 6.2 30 38-67 186-216 (322)
264 3tc9_A Hypothetical hydrolase; 49.8 57 0.002 22.1 7.0 29 38-66 271-300 (430)
265 1n7d_A LDL receptor, low-densi 48.7 76 0.0026 23.2 7.8 30 37-66 540-570 (699)
266 1w6s_A Methanol dehydrogenase 45.0 42 0.0015 24.1 4.9 56 9-70 451-506 (599)
267 1fwx_A Nitrous oxide reductase 44.5 52 0.0018 23.8 5.3 58 9-67 297-361 (595)
268 3f7f_A Nucleoporin NUP120; nuc 44.1 17 0.00058 27.0 2.8 24 71-94 235-258 (729)
269 3ei3_A DNA damage-binding prot 39.4 1.4E+02 0.0046 23.6 7.1 35 35-69 552-593 (1158)
270 2xe4_A Oligopeptidase B; hydro 36.0 43 0.0015 24.5 3.9 31 38-68 175-211 (751)
271 2xzh_A Clathrin heavy chain 1; 35.2 1E+02 0.0036 20.9 10.1 85 10-100 179-304 (365)
272 3sre_A PON1, serum paraoxonase 34.8 1E+02 0.0035 20.6 6.0 32 36-67 220-252 (355)
273 2xe4_A Oligopeptidase B; hydro 34.4 1.4E+02 0.0047 22.0 7.2 31 37-67 271-304 (751)
274 3mwp_A Nucleoprotein; structur 33.5 9.6 0.00033 26.6 0.2 19 73-91 163-181 (577)
275 3das_A Putative oxidoreductase 29.1 1.3E+02 0.0044 20.0 6.1 32 35-66 30-61 (347)
276 2g8s_A Glucose/sorbosone dehyd 27.9 1.3E+02 0.0044 19.7 5.6 29 36-65 17-46 (353)
277 1ukf_A Avirulence protein AVRP 26.7 92 0.0031 19.0 3.6 30 38-67 120-150 (188)
278 2p4o_A Hypothetical protein; p 25.3 1.3E+02 0.0045 18.8 8.0 32 36-67 71-104 (306)
279 3p5b_L Low density lipoprotein 21.3 1.9E+02 0.0065 19.3 11.9 31 37-67 246-277 (400)
280 2p9w_A MAL S 1 allergenic prot 20.9 1.9E+02 0.0066 19.2 6.2 29 39-67 187-215 (334)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.83 E-value=1.4e-19 Score=120.38 Aligned_cols=100 Identities=18% Similarity=0.201 Sum_probs=87.5
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCC-CeEEEeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDS-RHLISNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+++.|++|++||+.. .+++..+.+|.+.|.+++|++++ ..+++++.|++|++||+++...
T Consensus 144 sgs~d~~i~iwd~~~-----~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 218 (344)
T 4gqb_B 144 SGSKDICIKVWDLAQ-----QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPT 218 (344)
T ss_dssp EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEE
T ss_pred EEeCCCeEEEEECCC-----CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccce
Confidence 678899999999987 78888999999999999999987 4789999999999999987543
Q ss_pred ------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeeecc
Q psy1285 71 ------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYRRE 110 (118)
Q Consensus 71 ------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 110 (118)
++|+.|++|++||+++++.+..+..|...|..+.|++.-.
T Consensus 219 ~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~ 270 (344)
T 4gqb_B 219 SLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSV 270 (344)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSS
T ss_pred eeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC
Confidence 6788999999999999999999999999999999987543
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.81 E-value=5.9e-19 Score=115.14 Aligned_cols=101 Identities=19% Similarity=0.253 Sum_probs=87.0
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCC-CCCeEEEeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKG-DSRHLISNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+++.|++|++||++.. ......+.+|...|.+++|+| ++..|++|+.|++|++||++....
T Consensus 114 sgs~D~~v~lWd~~~~----~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~ 189 (304)
T 2ynn_A 114 SGSDDLTVKLWNWENN----WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNY 189 (304)
T ss_dssp EEETTSCEEEEEGGGT----TEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEE
T ss_pred EECCCCeEEEEECCCC----cchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEE
Confidence 7889999999999862 345567889999999999999 678999999999999999865321
Q ss_pred ------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeeecc
Q psy1285 71 ------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYRRE 110 (118)
Q Consensus 71 ------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 110 (118)
++|+.|++|++||+++++....+.+|...|..+.|++..+
T Consensus 190 ~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 241 (304)
T 2ynn_A 190 VDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (304)
T ss_dssp EEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred EEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCC
Confidence 7889999999999999999989999999999998876543
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.80 E-value=6.9e-19 Score=115.84 Aligned_cols=98 Identities=26% Similarity=0.276 Sum_probs=88.6
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|+.|++||++. .+.+..+.+|...|.+++|+|++++|++++.|++|++||++....
T Consensus 181 sg~~dg~i~iwd~~~-----~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 255 (321)
T 3ow8_A 181 SGAIDGIINIFDIAT-----GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVA 255 (321)
T ss_dssp EEETTSCEEEEETTT-----TEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred EEcCCCeEEEEECCC-----CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEE
Confidence 567899999999987 678888999999999999999999999999999999999986442
Q ss_pred --------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|++|++||+++++....+..|...|..+.|++.
T Consensus 256 ~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~ 301 (321)
T 3ow8_A 256 FCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGN 301 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 78899999999999999999888899999999999754
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.79 E-value=1e-18 Score=118.34 Aligned_cols=97 Identities=30% Similarity=0.353 Sum_probs=85.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||+|+|||+.. +.....+.+|.+.|.+++|+|++++|++|+.|++|++||+.+...
T Consensus 125 s~s~Dg~i~vwd~~~-----~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~ 199 (410)
T 1vyh_C 125 SASEDATIKVWDYET-----GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVS 199 (410)
T ss_dssp EEESSSCEEEEETTT-----CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEE
T ss_pred EEeCCCeEEEEECCC-----CcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEE
Confidence 778899999999987 677788999999999999999999999999999999999976432
Q ss_pred --------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 107 (118)
++|+.|++|++||++++.....+..|...+..+.|++
T Consensus 200 ~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 244 (410)
T 1vyh_C 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244 (410)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC
Confidence 7889999999999999998888888887777776653
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.79 E-value=2.2e-18 Score=114.69 Aligned_cols=98 Identities=23% Similarity=0.254 Sum_probs=87.8
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||+|++||++. ..++..+.+|...|.+++|+|++.+|++++.|++|++||++....
T Consensus 215 sgs~Dg~v~~wd~~~-----~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~ 289 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRS-----GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASS 289 (354)
T ss_dssp EEETTSCEEEEETTT-----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred EEeCCCeEEEEECCC-----CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeE
Confidence 678899999999987 677888899999999999999999999999999999999875321
Q ss_pred ----------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 ----------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ----------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|++|++||++++.....+..|...|..+.|++.
T Consensus 290 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPD 337 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred EEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCC
Confidence 67888999999999999988888899999999999764
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.79 E-value=2.2e-18 Score=113.95 Aligned_cols=98 Identities=20% Similarity=0.204 Sum_probs=87.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|++|++||++. ......+.+|...|.+++|+|++++|++++.|++|++||++....
T Consensus 201 sg~~d~~v~~wd~~~-----~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~ 275 (340)
T 1got_B 201 SGACDASAKLWDVRE-----GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITS 275 (340)
T ss_dssp EEETTSCEEEEETTT-----CSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred EEeCCCcEEEEECCC-----CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEE
Confidence 678899999999987 677888999999999999999999999999999999999975321
Q ss_pred ----------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 ----------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ----------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|+.|++||+++......+.+|...|..+.|++.
T Consensus 276 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~d 323 (340)
T 1got_B 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD 323 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred EEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCC
Confidence 77889999999999999988888899999999999754
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.79 E-value=7.3e-19 Score=114.69 Aligned_cols=98 Identities=14% Similarity=0.114 Sum_probs=85.6
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||+|++||+.. ...+..+..|...|.+++|+|++++|++++.|++|++||+.+...
T Consensus 30 s~~~dg~v~lWd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~ 104 (304)
T 2ynn_A 30 TTLYSGRVELWNYET-----QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIA 104 (304)
T ss_dssp EEETTSEEEEEETTT-----TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEcCCCcEEEEECCC-----CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEE
Confidence 788899999999987 677888889999999999999999999999999999999987543
Q ss_pred --------cceecCCcEEEEeCCCCcce-eeecccCcceeeEeeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNK-TAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|++|++||+++.... ..+..|...|..+.|++.
T Consensus 105 ~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 105 VHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp ECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTT
T ss_pred EcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCC
Confidence 78999999999999987544 456688888999988763
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.79 E-value=2.3e-18 Score=114.60 Aligned_cols=103 Identities=18% Similarity=0.209 Sum_probs=79.5
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||+|+|||+..+.. .......+.+|.+.|.+++|+|++++|++++.|++|++||+++...
T Consensus 98 ~~s~dg~v~lWd~~~~~~-~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~ 176 (344)
T 4gqb_B 98 VASDSGAVELWELDENET-LIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVA 176 (344)
T ss_dssp EEETTSEEEEEEECTTSS-CEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEECCCEEEEEeccCCCc-eeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEE
Confidence 678899999999987211 0011223458999999999999999999999999999999987543
Q ss_pred ---------cceecCCcEEEEeCCCCcceeeec--ccCcceeeEeeeeec
Q psy1285 71 ---------AANSKDQTIKLWDVRKFSNKTAQR--NTFRAVCEQNWEYRR 109 (118)
Q Consensus 71 ---------~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~ 109 (118)
++++.|++|++||+++++....+. .+...+..+.|++.-
T Consensus 177 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 226 (344)
T 4gqb_B 177 ASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQ 226 (344)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSC
T ss_pred ecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCC
Confidence 678899999999999998877654 344456777776543
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.78 E-value=4.3e-18 Score=111.77 Aligned_cols=98 Identities=19% Similarity=0.327 Sum_probs=86.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|++|++||+.. .+....+.+|.+.|.+++|+|++.++++++.|++|++||++....
T Consensus 82 s~s~D~~v~~wd~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~ 156 (319)
T 3frx_A 82 SASWDKTLRLWDVAT-----GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRV 156 (319)
T ss_dssp EEETTSEEEEEETTT-----TEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEE
T ss_pred EEeCCCEEEEEECCC-----CCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEE
Confidence 788899999999987 677888999999999999999999999999999999999864211
Q ss_pred -------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 -------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||+++......+..|...|..+.|++.
T Consensus 157 ~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~ 207 (319)
T 3frx_A 157 VPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPD 207 (319)
T ss_dssp CCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTT
T ss_pred ccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCC
Confidence 67889999999999999888888889999999888754
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.76 E-value=5.7e-18 Score=114.62 Aligned_cols=98 Identities=26% Similarity=0.430 Sum_probs=88.6
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|++|++||+.. .+.+..+.+|...|.+++|+|++.++++++.|++|++||+++...
T Consensus 167 sgs~D~~i~iwd~~~-----~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~ 241 (410)
T 1vyh_C 167 SCSADMTIKLWDFQG-----FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241 (410)
T ss_dssp EEETTSCCCEEETTS-----SCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEeCCCeEEEEeCCC-----CceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEE
Confidence 788999999999986 677888899999999999999999999999999999999986542
Q ss_pred --------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|++|++||+++......+..|...|..+.|++.
T Consensus 242 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~ 287 (410)
T 1vyh_C 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPE 287 (410)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCS
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCc
Confidence 78899999999999999888888889999999999864
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.76 E-value=6e-18 Score=113.39 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=84.5
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|++|++||++.. ...+..+.+|.+.|.+++|+|++.+|++++.|++|++||+++...
T Consensus 223 sgs~D~~v~~wd~~~~----~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 298 (380)
T 3iz6_a 223 SGSCDTTVRLWDLRIT----SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNEL 298 (380)
T ss_dssp EEETTSCEEEEETTTT----CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSS
T ss_pred EEECCCeEEEEECCCC----CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccccc
Confidence 6788999999999842 467778899999999999999999999999999999999975321
Q ss_pred ---------------cceecCCcEEEEeCCCCcceeee----cccCcceeeEeeeee
Q psy1285 71 ---------------AANSKDQTIKLWDVRKFSNKTAQ----RNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ---------------~s~~~d~~i~iwd~~~~~~~~~~----~~~~~~v~~~~~~~~ 108 (118)
++|+.|+.|++||+...+....+ ..|...|.++.|++.
T Consensus 299 ~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~d 355 (380)
T 3iz6_a 299 PIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSD 355 (380)
T ss_dssp CSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSS
T ss_pred CceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCC
Confidence 67888999999999988877655 468888999888764
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.76 E-value=7.7e-18 Score=110.56 Aligned_cols=102 Identities=22% Similarity=0.276 Sum_probs=83.1
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|++|++|++.........++..+.+|...|.+++|+|++++|++++.|++|++||+.+...
T Consensus 35 s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~ 114 (319)
T 3frx_A 35 SASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVD 114 (319)
T ss_dssp EEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEE
Confidence 78899999999997532222345678899999999999999999999999999999999987543
Q ss_pred --------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|++|++||++. .....+..|...+..+.|.+.
T Consensus 115 ~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 115 IDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp ECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccC
Confidence 7889999999999974 445566678878887777653
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.75 E-value=2.4e-17 Score=107.33 Aligned_cols=98 Identities=23% Similarity=0.365 Sum_probs=87.4
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||.|++|+... ......+.+|...|.+++|+|++++|++++.|+.|++||+++...
T Consensus 40 s~~~dg~i~iw~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~ 114 (312)
T 4ery_A 40 SSSADKLIKIWGAYD-----GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCN 114 (312)
T ss_dssp EEETTSCEEEEETTT-----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EeeCCCeEEEEeCCC-----cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 678899999999986 677778889999999999999999999999999999999986543
Q ss_pred --------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|++|++||+++.+....+..|...+..+.|++.
T Consensus 115 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
T 4ery_A 115 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 160 (312)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred EcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCC
Confidence 78899999999999999988888888888998888754
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.75 E-value=2.1e-17 Score=110.12 Aligned_cols=101 Identities=15% Similarity=0.249 Sum_probs=88.5
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCC-eEEEeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSR-HLISNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+++.|++|++||++. .+.+..+.+|.+.|.+++|++++. .+++++.|++|++||+++...
T Consensus 156 sgs~dg~v~iwd~~~-----~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~ 230 (357)
T 4g56_B 156 SGGKDFSVKVWDLSQ-----KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPT 230 (357)
T ss_dssp EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEE
T ss_pred EEeCCCeEEEEECCC-----CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecccccccc
Confidence 678899999999987 788888999999999999999764 789999999999999986543
Q ss_pred ------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeeeccc
Q psy1285 71 ------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYRREN 111 (118)
Q Consensus 71 ------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 111 (118)
++|+.|+.|++||+++++....+..|...|..+.|++.-..
T Consensus 231 ~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~ 283 (357)
T 4g56_B 231 SVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSP 283 (357)
T ss_dssp EEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSC
T ss_pred chhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCC
Confidence 67888999999999999999888899999999999865433
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.74 E-value=2.1e-17 Score=108.91 Aligned_cols=103 Identities=15% Similarity=0.275 Sum_probs=77.1
Q ss_pred ccccCceEEEEeCCCCCC--CCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC----c---------
Q psy1285 6 QVASLVTCFVWDRRTLNE--TTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN----G--------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~----~--------- 70 (118)
+++.|++|+|||+..... ....+...+.+|.+.|.+++|+|++++|++++.|++|++||++... .
T Consensus 75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~ 154 (330)
T 2hes_X 75 AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ 154 (330)
T ss_dssp EEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC
Confidence 678899999999964211 1134567788999999999999999999999999999999994211 0
Q ss_pred --------------cceecCCcEEEEeCCCC--cceeeecccCcceeeEeeeee
Q psy1285 71 --------------AANSKDQTIKLWDVRKF--SNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------------~s~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|++|++||.+.. .....+.+|...|..+.|++.
T Consensus 155 ~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 208 (330)
T 2hes_X 155 DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKT 208 (330)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCS
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCC
Confidence 78899999999998876 455666788888888888765
No 16
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.74 E-value=3.1e-17 Score=107.18 Aligned_cols=102 Identities=19% Similarity=0.250 Sum_probs=79.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|++|+|||+.........+...+.+|.+.|.+++|+|++++|++++.|+.|++|+......
T Consensus 56 S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (340)
T 4aow_A 56 SASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVA 135 (340)
T ss_dssp EEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEE
Confidence 78899999999998744334456778899999999999999999999999999999999876432
Q ss_pred -----------------------------------------------------cceecCCcEEEEeCCCCcceeeecccC
Q psy1285 71 -----------------------------------------------------AANSKDQTIKLWDVRKFSNKTAQRNTF 97 (118)
Q Consensus 71 -----------------------------------------------------~s~~~d~~i~iwd~~~~~~~~~~~~~~ 97 (118)
++++.|+.|++||+++......+..|.
T Consensus 136 ~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~ 215 (340)
T 4aow_A 136 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 215 (340)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred EeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCC
Confidence 455667777777777776666666677
Q ss_pred cceeeEeeee
Q psy1285 98 RAVCEQNWEY 107 (118)
Q Consensus 98 ~~v~~~~~~~ 107 (118)
..|..+.|++
T Consensus 216 ~~v~~~~~s~ 225 (340)
T 4aow_A 216 GYLNTVTVSP 225 (340)
T ss_dssp SCEEEEEECT
T ss_pred CcEEEEEECC
Confidence 7777766654
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.74 E-value=6.9e-17 Score=106.78 Aligned_cols=98 Identities=14% Similarity=0.188 Sum_probs=87.1
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||+|+|||+.. ......+..|...|.+++|+|+++++++++.|+.+++||+.+...
T Consensus 72 s~s~Dg~v~iWd~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v 146 (340)
T 1got_B 72 SASQDGKLIIWDSYT-----TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYL 146 (340)
T ss_dssp EEETTTEEEEEETTT-----CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCE
T ss_pred EEeCCCcEEEEECCC-----CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccE
Confidence 788999999999987 677788888999999999999999999999999999999875421
Q ss_pred -----------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 -----------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -----------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|++|++||++++.....+..|...|..+.|++.
T Consensus 147 ~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 195 (340)
T 1got_B 147 SCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195 (340)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCC
Confidence 67889999999999999988888889989999888764
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.74 E-value=4.2e-17 Score=109.72 Aligned_cols=97 Identities=26% Similarity=0.337 Sum_probs=83.1
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|++|++||+.. .+....+.+|...|.+++|+|++.+|++++.|++|++||+++...
T Consensus 140 s~~~d~~i~iwd~~~-----~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~ 214 (393)
T 1erj_A 140 TGAEDRLIRIWDIEN-----RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV 214 (393)
T ss_dssp EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred EEcCCCeEEEEECCC-----CcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEE
Confidence 678899999999987 677788899999999999999999999999999999999986432
Q ss_pred --------cceecCCcEEEEeCCCCcceeee-------cccCcceeeEeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNKTAQ-------RNTFRAVCEQNWEY 107 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~~~~-------~~~~~~v~~~~~~~ 107 (118)
++|+.|+.|++||++++.....+ ..|...|..+.|++
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~ 266 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR 266 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC
Confidence 77889999999999988776554 35677788777764
No 19
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.73 E-value=1.7e-17 Score=112.81 Aligned_cols=101 Identities=11% Similarity=0.015 Sum_probs=81.2
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCC-CCCeEEEeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKG-DSRHLISNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+++.||.|+|||+... .......+.+|.+.|.+++|+| ++.+|++++.|++|++||++....
T Consensus 137 sGs~dg~i~lWd~~~~---~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 213 (435)
T 4e54_B 137 VGSKGGDIMLWNFGIK---DKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFC 213 (435)
T ss_dssp EEETTSCEEEECSSCC---SCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCC
T ss_pred EEeCCCEEEEEECCCC---CceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEE
Confidence 5678999999999762 1234455678999999999998 688999999999999999875321
Q ss_pred -----------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeeecc
Q psy1285 71 -----------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYRRE 110 (118)
Q Consensus 71 -----------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 110 (118)
++|+.|+.|++||++. .....+..|...|..+.|++.-+
T Consensus 214 ~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 214 SLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCD 263 (435)
T ss_dssp CEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCS
T ss_pred EEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCc
Confidence 6788999999999975 44556678888999998876543
No 20
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.73 E-value=6.3e-17 Score=104.87 Aligned_cols=59 Identities=17% Similarity=0.322 Sum_probs=50.2
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeee--cCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVL--AGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~ 69 (118)
.++.|++|+|||+.+ ++....+ .+|...|.+++|+|++++|++|+.|++|++||+++..
T Consensus 40 Avg~D~tV~iWd~~t-----g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 40 AVALDNSVYLWSASS-----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp EEEETTEEEEEETTT-----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEeCCEEEEEECCC-----CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce
Confidence 356799999999987 5655544 4678889999999999999999999999999998643
No 21
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.73 E-value=9e-17 Score=105.75 Aligned_cols=98 Identities=17% Similarity=0.103 Sum_probs=86.8
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||.|++||+.. ......+..|...+.+++|+|++++|++++.|+.|++||+++...
T Consensus 139 ~g~~dg~v~i~~~~~-----~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 213 (321)
T 3ow8_A 139 TGTHVGKVNIFGVES-----GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 213 (321)
T ss_dssp EECTTSEEEEEETTT-----CSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEE
T ss_pred EEcCCCcEEEEEcCC-----CceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEE
Confidence 567899999999987 667777888999999999999999999999999999999986432
Q ss_pred --------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|++|++||++.......+..|...|..+.|++.
T Consensus 214 ~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 259 (321)
T 3ow8_A 214 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD 259 (321)
T ss_dssp ECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred EcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCC
Confidence 78899999999999999988888889999999988764
No 22
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.73 E-value=8.5e-17 Score=106.37 Aligned_cols=97 Identities=21% Similarity=0.301 Sum_probs=81.1
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC----------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN---------------- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~---------------- 69 (118)
+++.|++|++||++. ......+.+|.+.|.+++|+|++++|++++.|++|++||+....
T Consensus 93 s~s~D~~v~lwd~~~-----~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~ 167 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRT-----GTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSC 167 (343)
T ss_dssp EEETTSEEEEEETTS-----SCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEE
T ss_pred EEcCCCcEEEEECCC-----CcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeee
Confidence 778899999999987 67788899999999999999999999999999999999985210
Q ss_pred -------------------ccceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 70 -------------------GAANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 70 -------------------~~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
.++++.|++|++||. .......+..|...|..+.|++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTT
T ss_pred eeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCC
Confidence 056788999999994 44555566688888888888754
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.72 E-value=5e-17 Score=107.69 Aligned_cols=100 Identities=18% Similarity=0.253 Sum_probs=82.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|++++|||+... .......+.+|.+.|.+++|+|++++|++++.|++|++||++....
T Consensus 78 s~s~D~~v~iw~~~~~---~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~ 154 (345)
T 3fm0_A 78 SASFDATTCIWKKNQD---DFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVK 154 (345)
T ss_dssp EEETTSCEEEEEECCC----EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEE
T ss_pred EEECCCcEEEEEccCC---CeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeE
Confidence 6788999999998752 1345678889999999999999999999999999999999875321
Q ss_pred -----------cceecCCcEEEEeCCCCcc--eeeecccCcceeeEeeeee
Q psy1285 71 -----------AANSKDQTIKLWDVRKFSN--KTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -----------~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|++|++||.+.... ...+.+|...|..+.|++.
T Consensus 155 ~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 205 (345)
T 3fm0_A 155 HVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS 205 (345)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTT
T ss_pred EEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCC
Confidence 7889999999999987753 3456688888888888753
No 24
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.72 E-value=7.2e-17 Score=115.21 Aligned_cols=98 Identities=20% Similarity=0.277 Sum_probs=86.4
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|++|+|||+.. ......+.+|.+.|.+++|+|++++|++++.|++|++||......
T Consensus 447 sgs~Dg~v~vwd~~~-----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 521 (694)
T 3dm0_A 447 SGSWDGELRLWDLAA-----GVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVS 521 (694)
T ss_dssp EEETTSEEEEEETTT-----TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEE
T ss_pred EEeCCCcEEEEECCC-----CcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEE
Confidence 678899999999987 677788899999999999999999999999999999999743110
Q ss_pred -------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 -------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|++|++||+++......+..|...|..+.|++.
T Consensus 522 ~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd 572 (694)
T 3dm0_A 522 CVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPD 572 (694)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred EEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCC
Confidence 67889999999999999888888899999999998764
No 25
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.71 E-value=2.7e-16 Score=102.22 Aligned_cols=100 Identities=17% Similarity=0.162 Sum_probs=81.5
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCC--CCCeEEEeeCCCcEEEEecCCCC--c-----------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKG--DSRHLISNSKDQTIKLWDVRKFN--G----------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~~wd~~~~~--~----------- 70 (118)
+++.|++|+|||+... ...++..+.+|.+.|.+++|++ ++++|++++.|++|++||+++.. .
T Consensus 26 s~s~D~~v~iw~~~~~---~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v 102 (297)
T 2pm7_B 26 TCSSDKTIKIFEVEGE---THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASV 102 (297)
T ss_dssp EEETTSCEEEEEBCSS---CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCE
T ss_pred EEeCCCEEEEEecCCC---CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCce
Confidence 7788999999999741 2466788999999999999986 38899999999999999997542 0
Q ss_pred --------------cceecCCcEEEEeCCCCcc--eeeecccCcceeeEeeeee
Q psy1285 71 --------------AANSKDQTIKLWDVRKFSN--KTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------------~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|++|++||++.... ...+..|...+..+.|++.
T Consensus 103 ~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 103 NSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred eEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 6788899999999987642 3345578888888888764
No 26
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.71 E-value=6e-17 Score=113.18 Aligned_cols=100 Identities=6% Similarity=-0.121 Sum_probs=83.8
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEE--EeCCCC-CeEEEeeCCCcEEEEecCCCC-------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFI--DPKGDS-RHLISNSKDQTIKLWDVRKFN------------- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~-~~l~s~~~d~~i~~wd~~~~~------------- 69 (118)
+++.||+|++||++.+ ..+...+.+|.+.|.++ .|++++ .+|++++.|++|+|||+++..
T Consensus 282 sgs~DgtV~lWD~~~~----~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 282 CGFKNGFVAEFDLTDP----EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp EEETTSEEEEEETTBC----SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred EEeCCCEEEEEECCCC----CCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 6788999999999862 34556688999999999 578887 899999999999999986411
Q ss_pred --c----------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeeec
Q psy1285 70 --G----------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYRR 109 (118)
Q Consensus 70 --~----------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 109 (118)
. ++++.|++|++||++.+.....+.+|...|..+.|++.-
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g 409 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLH 409 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSC
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCC
Confidence 0 667789999999999998888888899999999998754
No 27
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.71 E-value=4.1e-18 Score=114.76 Aligned_cols=86 Identities=16% Similarity=0.167 Sum_probs=68.4
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCC--------CCCeEEEeeCCCcEEEEecCCCCc-------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKG--------DSRHLISNSKDQTIKLWDVRKFNG------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--------~~~~l~s~~~d~~i~~wd~~~~~~------- 70 (118)
+++.|++|||||.+........++..+.+|.+.|.+++|+| ++++|++++.|++|+|||+++...
T Consensus 106 s~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~ 185 (393)
T 4gq1_A 106 CVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPL 185 (393)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEEC
T ss_pred EEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCC
Confidence 67889999999998632211233455789999999999987 788999999999999999976432
Q ss_pred -----------------cceecCCcEEEEeCCCCccee
Q psy1285 71 -----------------AANSKDQTIKLWDVRKFSNKT 91 (118)
Q Consensus 71 -----------------~s~~~d~~i~iwd~~~~~~~~ 91 (118)
++++.|++|++||++++....
T Consensus 186 ~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~ 223 (393)
T 4gq1_A 186 SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAE 223 (393)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC---
T ss_pred CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccc
Confidence 788999999999999887654
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.71 E-value=3e-16 Score=102.15 Aligned_cols=98 Identities=19% Similarity=0.291 Sum_probs=83.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|+.|++||++. ...+..+.+|...|.+++|+|+++++++++.|+.|++||+++...
T Consensus 82 s~~~d~~i~vwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~ 156 (312)
T 4ery_A 82 SASDDKTLKIWDVSS-----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 156 (312)
T ss_dssp EEETTSEEEEEETTT-----CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred EECCCCEEEEEECCC-----CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEE
Confidence 678899999999987 677888899999999999999999999999999999999986543
Q ss_pred --------cceecCCcEEEEeCCCCcceeeec-ccCcceeeEeeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNKTAQR-NTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||+++.+....+. .+...+..+.|++.
T Consensus 157 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (312)
T 4ery_A 157 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 203 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTT
T ss_pred EcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCC
Confidence 788899999999999988776654 44556777777643
No 29
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.71 E-value=3.1e-17 Score=109.35 Aligned_cols=104 Identities=18% Similarity=0.241 Sum_probs=76.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||+|+|||+...... ........+|.+.|.+++|+|++++|++++.|++|++||+++...
T Consensus 110 ~~s~dg~v~lWd~~~~~~~-~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~ 188 (357)
T 4g56_B 110 VASDSGAVELWEILEKESL-LVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVA 188 (357)
T ss_dssp EEETTSCEEEC---------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEECCCEEEEeecccccee-EEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 6788999999999863210 112233457999999999999999999999999999999986543
Q ss_pred ---------cceecCCcEEEEeCCCCcceeeec--ccCcceeeEeeeeecc
Q psy1285 71 ---------AANSKDQTIKLWDVRKFSNKTAQR--NTFRAVCEQNWEYRRE 110 (118)
Q Consensus 71 ---------~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~ 110 (118)
++++.|++|++||+++++....+. .+...+..+.|++...
T Consensus 189 ~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 189 ACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp ECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTST
T ss_pred EccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhccc
Confidence 678889999999999988765543 5566788888876443
No 30
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.71 E-value=1.2e-16 Score=105.92 Aligned_cols=99 Identities=16% Similarity=0.204 Sum_probs=79.4
Q ss_pred ccccCceEEEEeCCCCCCCCCCc--e-eeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKP--V-GVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------ 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~--~-~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------ 70 (118)
+++.|++|+|||+.. ... . ....+|.+.|.+++|+|++++|++++.|+++++||+.....
T Consensus 33 s~~~D~~i~iw~~~~-----~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~ 107 (345)
T 3fm0_A 33 SCGGDRRIRIWGTEG-----DSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENE 107 (345)
T ss_dssp EEETTSCEEEEEEET-----TEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSC
T ss_pred EEcCCCeEEEEEcCC-----CcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCC
Confidence 788999999999975 221 1 22368999999999999999999999999999999865321
Q ss_pred -------------cceecCCcEEEEeCCCCcce---eeecccCcceeeEeeeeec
Q psy1285 71 -------------AANSKDQTIKLWDVRKFSNK---TAQRNTFRAVCEQNWEYRR 109 (118)
Q Consensus 71 -------------~s~~~d~~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~ 109 (118)
++|+.|++|++||++..... ..+..|...|..+.|++.-
T Consensus 108 v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 108 VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS
T ss_pred ceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC
Confidence 78899999999999876543 3455788889888887653
No 31
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.71 E-value=2.2e-16 Score=102.61 Aligned_cols=100 Identities=12% Similarity=0.184 Sum_probs=82.0
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCC--CCeEEEeeCCCcEEEEecCCCC--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGD--SRHLISNSKDQTIKLWDVRKFN-------------- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~~wd~~~~~-------------- 69 (118)
+++.|++|+|||+..+ .......+.+|...|.+++|+|+ +.+|++++.|++|++||++...
T Consensus 72 s~s~D~~v~iWd~~~~---~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v 148 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENG---RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 148 (297)
T ss_dssp EEETTTEEEEEEBSSS---CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCE
T ss_pred EEcCCCEEEEEEcCCC---ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCcc
Confidence 6788999999999862 12355667789999999999997 8899999999999999987531
Q ss_pred ------------------------ccceecCCcEEEEeCCCCc----ceeeecccCcceeeEeeeee
Q psy1285 70 ------------------------GAANSKDQTIKLWDVRKFS----NKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 70 ------------------------~~s~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~ 108 (118)
.++|+.|++|++||++... ....+.+|...|..+.|++.
T Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~ 215 (297)
T 2pm7_B 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT 215 (297)
T ss_dssp EEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCC
T ss_pred ceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCC
Confidence 1567889999999998766 34456689999999999875
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.70 E-value=3e-16 Score=105.57 Aligned_cols=97 Identities=24% Similarity=0.345 Sum_probs=81.6
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeee-------cCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc--------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVL-------AGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG-------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-------- 70 (118)
+++.|+.|++||++. ...+..+ .+|.+.|.+++|+|++++|++++.|++|++||+++...
T Consensus 224 ~~s~d~~v~iwd~~~-----~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 298 (393)
T 1erj_A 224 AGSLDRAVRVWDSET-----GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 298 (393)
T ss_dssp EEETTSCEEEEETTT-----CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred EEcCCCcEEEEECCC-----CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCC
Confidence 577899999999986 4444444 57999999999999999999999999999999875210
Q ss_pred ---------------------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeee
Q psy1285 71 ---------------------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 ---------------------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 107 (118)
++|+.|+.|++||++++.....+.+|...|..+.|+.
T Consensus 299 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~ 362 (393)
T 1erj_A 299 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVAN 362 (393)
T ss_dssp --CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred CCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecC
Confidence 7889999999999999998888889999999998875
No 33
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.70 E-value=8e-17 Score=108.49 Aligned_cols=58 Identities=14% Similarity=0.170 Sum_probs=50.2
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCC-CeEEEeeCCCcEEEEecCCC
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDS-RHLISNSKDQTIKLWDVRKF 68 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~~wd~~~~ 68 (118)
+++.|++|||||++. ..+...+.+|.+.+.+++|+|++ ++|++++.|++|++||+++.
T Consensus 161 s~s~D~tv~~Wd~~~-----~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 161 SVGDDCTLIIWRLTD-----EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEETTSEEEEEEEET-----TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred EEECCCeEEEEECCC-----CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 788999999999986 56666677799999999999976 57999999999999998753
No 34
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.70 E-value=3.3e-16 Score=103.57 Aligned_cols=104 Identities=20% Similarity=0.283 Sum_probs=81.1
Q ss_pred ccccCceEEEEeCCCCCCC--CCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc-------------
Q psy1285 6 QVASLVTCFVWDRRTLNET--TAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------- 70 (118)
+++.|++|++||+...... ...+...+.+|...|.+++|+|++.++++++.|++|++||+++...
T Consensus 44 sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~ 123 (343)
T 2xzm_R 44 SGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYS 123 (343)
T ss_dssp EEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEE
T ss_pred EEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEE
Confidence 7888999999999752211 1245567889999999999999999999999999999999987543
Q ss_pred ----------cceecCCcEEEEeCCCCcceeee--cccCcceeeEeeeeec
Q psy1285 71 ----------AANSKDQTIKLWDVRKFSNKTAQ--RNTFRAVCEQNWEYRR 109 (118)
Q Consensus 71 ----------~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~ 109 (118)
++++.|++|++||++........ ..|...+..+.|++..
T Consensus 124 v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 174 (343)
T 2xzm_R 124 VAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIM 174 (343)
T ss_dssp EEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCC
T ss_pred EEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccc
Confidence 78899999999999844332222 2677778888887643
No 35
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.70 E-value=2.5e-16 Score=102.86 Aligned_cols=98 Identities=17% Similarity=0.220 Sum_probs=82.7
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|+.|++||++. ......+.+|.+.|.+++|+|++++|++++.|++|++||+++...
T Consensus 190 s~~~d~~i~i~d~~~-----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~ 264 (340)
T 4aow_A 190 SCGWDKLVKVWNLAN-----CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF 264 (340)
T ss_dssp EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred EEcCCCEEEEEECCC-----CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeec
Confidence 567899999999987 677888899999999999999999999999999999999987543
Q ss_pred ------cceecCCcEEEEeCCCCcceeee---------cccCcceeeEeeeee
Q psy1285 71 ------AANSKDQTIKLWDVRKFSNKTAQ---------RNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ------~s~~~d~~i~iwd~~~~~~~~~~---------~~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||++.......+ ..|...|..+.|++.
T Consensus 265 ~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d 317 (340)
T 4aow_A 265 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 317 (340)
T ss_dssp CSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTT
T ss_pred CCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCC
Confidence 67788999999999987665433 256677888888754
No 36
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.70 E-value=4.2e-16 Score=103.69 Aligned_cols=97 Identities=20% Similarity=0.356 Sum_probs=78.8
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCC--CCCeEEEeeCCCcEEEEecCCCCc-------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKG--DSRHLISNSKDQTIKLWDVRKFNG------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~~wd~~~~~~------------- 70 (118)
+++.|++|++||+.. .+.+..+.+|...|.+++|+| +++.|++++.|++|++||+++...
T Consensus 171 t~s~D~~v~lwd~~~-----~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~ 245 (354)
T 2pbi_B 171 TASGDGTCALWDVES-----GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNS 245 (354)
T ss_dssp EEETTSEEEEEETTT-----CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEeCCCcEEEEeCCC-----CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEE
Confidence 788999999999987 678888999999999999987 578999999999999999986543
Q ss_pred ----------cceecCCcEEEEeCCCCcceeeecc--cCcceeeEeeee
Q psy1285 71 ----------AANSKDQTIKLWDVRKFSNKTAQRN--TFRAVCEQNWEY 107 (118)
Q Consensus 71 ----------~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~ 107 (118)
++|+.|++|++||++.......+.. +...+..+.|++
T Consensus 246 v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 246 VRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC
Confidence 7889999999999998876554432 223455555553
No 37
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.69 E-value=1.1e-16 Score=107.30 Aligned_cols=97 Identities=14% Similarity=0.122 Sum_probs=81.1
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC----------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN---------------- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~---------------- 69 (118)
+++.|++|+|||+.. ......+..|...|.+++|+|++++|++++.|+.+++||+....
T Consensus 83 s~s~D~~v~iWd~~~-----~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~ 157 (380)
T 3iz6_a 83 SASQDGRLIVWNALT-----SQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHK 157 (380)
T ss_dssp EEETTSEEEEEETTT-----TEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCS
T ss_pred EEeCCCeEEEEECCC-----CccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCC
Confidence 788999999999987 67778889999999999999999999999999999999985311
Q ss_pred ---------------ccceecCCcEEEEeCCCCcceeee-----cccCcceeeEeeee
Q psy1285 70 ---------------GAANSKDQTIKLWDVRKFSNKTAQ-----RNTFRAVCEQNWEY 107 (118)
Q Consensus 70 ---------------~~s~~~d~~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~ 107 (118)
.++|+.|++|++||++++.....+ ..|...+..+.|+.
T Consensus 158 ~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 158 GYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp SCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred cceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 078889999999999998876554 35666676666643
No 38
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.69 E-value=6.8e-16 Score=101.70 Aligned_cols=100 Identities=15% Similarity=0.201 Sum_probs=77.6
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeee-cC-ccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCC-------Cc------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVL-AG-HRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKF-------NG------ 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~-------~~------ 70 (118)
+++.|++|++||+... .......+ .+ |.+.|.+++|+|++++|++++.|++|++||+... ..
T Consensus 29 s~~~D~~i~lw~~~~~---~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 105 (330)
T 2hes_X 29 TGSTDRKIKLVSVKYD---DFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG 105 (330)
T ss_dssp EEESSSCEEEEECSSS---CCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-
T ss_pred EEcCCCEEEEEEecCC---CeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC
Confidence 6788999999999752 12344445 34 9999999999999999999999999999998421 00
Q ss_pred -----------------cceecCCcEEEEeCCCC----cceeeecccCcceeeEeeeee
Q psy1285 71 -----------------AANSKDQTIKLWDVRKF----SNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -----------------~s~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|++|++||++.. +....+..|...|..+.|++.
T Consensus 106 h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 164 (330)
T 2hes_X 106 HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPS 164 (330)
T ss_dssp ---CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSS
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCC
Confidence 78899999999999543 234456688888999888764
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.69 E-value=5.8e-16 Score=104.02 Aligned_cols=100 Identities=18% Similarity=0.197 Sum_probs=85.8
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|+.|++||+.. ......+.+|.+.|.+++|+|++++|++++.|++|++||+++...
T Consensus 156 s~s~d~~i~iwd~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~ 230 (420)
T 3vl1_A 156 SSSQDMQLKIWSVKD-----GSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVN 230 (420)
T ss_dssp EEETTSEEEEEETTT-----CCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEE
T ss_pred EEeCCCeEEEEeCCC-----CcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCcc
Confidence 678899999999987 677788889999999999999999999999999999999874211
Q ss_pred --------------------------------cceecCCcEEEEeCCCCcceeeec-ccCcceeeEeeeeecc
Q psy1285 71 --------------------------------AANSKDQTIKLWDVRKFSNKTAQR-NTFRAVCEQNWEYRRE 110 (118)
Q Consensus 71 --------------------------------~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 110 (118)
++|+.|+.|++||+++......+. .|...+..+.|++.-.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 303 (420)
T 3vl1_A 231 SIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNA 303 (420)
T ss_dssp EEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCT
T ss_pred EEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCC
Confidence 678889999999999998877765 5778899998876543
No 40
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.68 E-value=6.1e-16 Score=110.45 Aligned_cols=103 Identities=19% Similarity=0.252 Sum_probs=81.7
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|++|++||+.............+.+|.+.|.+++|+|++++|++|+.|++|++||+.+...
T Consensus 400 s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~ 479 (694)
T 3dm0_A 400 SASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVA 479 (694)
T ss_dssp EEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEE
Confidence 78899999999997632222344567889999999999999999999999999999999976432
Q ss_pred --------cceecCCcEEEEeCCCCcceeee---cccCcceeeEeeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNKTAQ---RNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~ 108 (118)
++++.|++|++||.......... ..|...|.++.|++.
T Consensus 480 ~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 480 FSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred EeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 78899999999998765433221 356777888888654
No 41
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.67 E-value=7.7e-16 Score=103.43 Aligned_cols=102 Identities=17% Similarity=0.215 Sum_probs=84.6
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCC-CCCeEEEeeCCCcEEEEecCCCC-------c-------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKG-DSRHLISNSKDQTIKLWDVRKFN-------G------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~-------~------- 70 (118)
+++.||.|+||++..... .......+.+|.+.|.+++|+| ++++|++++.|++|++||+.+.. .
T Consensus 52 ~~~~~g~i~v~~~~~~~~-~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h 130 (402)
T 2aq5_A 52 EASGGGAFLVLPLGKTGR-VDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH 130 (402)
T ss_dssp CCSSSCCEEEEETTCCEE-CCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC
T ss_pred EEcCCCEEEEEECccCCC-CCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC
Confidence 567899999999965211 1134556788999999999999 89999999999999999997651 1
Q ss_pred -----------------cceecCCcEEEEeCCCCcceeee--cccCcceeeEeeeee
Q psy1285 71 -----------------AANSKDQTIKLWDVRKFSNKTAQ--RNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -----------------~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||+++++....+ ..|...+..+.|++.
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 187 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRD 187 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTT
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCC
Confidence 67889999999999999988888 678889999999763
No 42
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.67 E-value=1.3e-16 Score=106.23 Aligned_cols=98 Identities=10% Similarity=0.048 Sum_probs=74.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCcc---CcEEEEEeCCCCCeE------------EEeeCCCcEEEEecCCCC-
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHR---DGITFIDPKGDSRHL------------ISNSKDQTIKLWDVRKFN- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l------------~s~~~d~~i~~wd~~~~~- 69 (118)
+++.|++|||||+++ ++.+.++.+|. ..+.+++|+|++..+ ++|+.|+++++||..+..
T Consensus 198 SgS~D~TIkIWDl~T-----Gk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~ 272 (356)
T 2w18_A 198 GTTIMNNIVIWNLKT-----GQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLS 272 (356)
T ss_dssp EEETTSEEEEEETTT-----CCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEE
T ss_pred EecCCCcEEEEECCC-----CcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEE
Confidence 578899999999998 78888887654 357778899999876 568889999999977542
Q ss_pred -------------------------ccceecCCcEEEEeCCCCcceeeecccCccee-eEeeeee
Q psy1285 70 -------------------------GAANSKDQTIKLWDVRKFSNKTAQRNTFRAVC-EQNWEYR 108 (118)
Q Consensus 70 -------------------------~~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~~ 108 (118)
.++++.|++|+|||+++++....+.+|...+. .+.|++.
T Consensus 273 l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPD 337 (356)
T 2w18_A 273 VGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGT 337 (356)
T ss_dssp EEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSS
T ss_pred EEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCC
Confidence 15667899999999999999999887876554 4788865
No 43
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.67 E-value=6.2e-16 Score=109.24 Aligned_cols=98 Identities=17% Similarity=0.189 Sum_probs=83.1
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeec-------CccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc--------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLA-------GHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG-------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-------- 70 (118)
+++.|++|++||+.. ++....+. +|.+.|.+++|+|++++|++++.|++|++||+++...
T Consensus 207 s~s~D~~i~lwd~~~-----g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~ 281 (611)
T 1nr0_A 207 STGGDGTIVLYNGVD-----GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGT 281 (611)
T ss_dssp EEETTSCEEEEETTT-----CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEECCCcEEEEECCC-----CcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCC
Confidence 688999999999976 55555553 7999999999999999999999999999999986421
Q ss_pred ----------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 ----------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ----------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|+.+++||...+.....+.+|...|..+.|++.
T Consensus 282 ~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spd 335 (611)
T 1nr0_A 282 RIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSAD 335 (611)
T ss_dssp SGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred CccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCC
Confidence 57788999999999988876677788888988888753
No 44
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.66 E-value=1.4e-15 Score=102.22 Aligned_cols=103 Identities=18% Similarity=0.250 Sum_probs=82.8
Q ss_pred ccccCceEEEEeCCCCCCC--CCCceeeecCccCcEEEEEeCCCC-CeEEEeeCCCcEEEEecCCCCc------------
Q psy1285 6 QVASLVTCFVWDRRTLNET--TAKPVGVLAGHRDGITFIDPKGDS-RHLISNSKDQTIKLWDVRKFNG------------ 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~~wd~~~~~~------------ 70 (118)
+++.||+|++||+...... ...+...+.+|.+.|.+++|+|++ +.|++++.|+.|++||+++...
T Consensus 99 s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 178 (402)
T 2aq5_A 99 SGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDT 178 (402)
T ss_dssp EEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSC
T ss_pred EEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCc
Confidence 6788999999999863110 015677888999999999999997 6999999999999999875321
Q ss_pred -------------cceecCCcEEEEeCCCCcceeee-cccCcc-eeeEeeeee
Q psy1285 71 -------------AANSKDQTIKLWDVRKFSNKTAQ-RNTFRA-VCEQNWEYR 108 (118)
Q Consensus 71 -------------~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~-v~~~~~~~~ 108 (118)
++++.|+.|++||++++.....+ ..|... +..+.|++.
T Consensus 179 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 179 IYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST
T ss_pred eEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC
Confidence 78889999999999999888777 566654 777777643
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.66 E-value=2.2e-16 Score=104.81 Aligned_cols=98 Identities=12% Similarity=0.194 Sum_probs=75.5
Q ss_pred ccccCceEEEEeCCCCCCCCC--CceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC---c----------
Q psy1285 6 QVASLVTCFVWDRRTLNETTA--KPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN---G---------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~---~---------- 70 (118)
+++.|+.|++||+.. . .....+.+|.+.|.+++|+|++++|++++.|++|++||+.+.. .
T Consensus 28 ~~~~d~~i~iw~~~~-----~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 102 (377)
T 3dwl_C 28 TTTATNQVELYEQDG-----NGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRA 102 (377)
T ss_dssp CCCSSSCBCEEEEET-----TEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSC
T ss_pred EecCCCEEEEEEccC-----CceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCc
Confidence 667899999999986 4 5667788999999999999999999999999999999998754 1
Q ss_pred -------------cceecCCcEEEEeCCCCcc---eeeecc-cCcceeeEeeeee
Q psy1285 71 -------------AANSKDQTIKLWDVRKFSN---KTAQRN-TFRAVCEQNWEYR 108 (118)
Q Consensus 71 -------------~s~~~d~~i~iwd~~~~~~---~~~~~~-~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||++.... ...+.. |...+..+.|++.
T Consensus 103 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp EEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTT
T ss_pred eEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC
Confidence 7788999999999998874 556665 8888998888764
No 46
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.66 E-value=5.5e-16 Score=101.62 Aligned_cols=101 Identities=18% Similarity=0.149 Sum_probs=81.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCC--CCeEEEeeCCCcEEEEecCCCC--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGD--SRHLISNSKDQTIKLWDVRKFN-------------- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~~wd~~~~~-------------- 69 (118)
+++.|++|++||++.+ .......+.+|.+.|.+++|+|+ +.+|++++.|++|++||++...
T Consensus 76 s~s~D~~v~iWd~~~~---~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~ 152 (316)
T 3bg1_A 76 SCSYDRKVIIWREENG---TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG 152 (316)
T ss_dssp EEETTSCEEEECCSSS---CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSC
T ss_pred EEECCCEEEEEECCCC---cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCC
Confidence 6788999999999862 12455677889999999999997 7899999999999999976420
Q ss_pred -----------------------------ccceecCCcEEEEeCCCC---cceeeecccCcceeeEeeeeec
Q psy1285 70 -----------------------------GAANSKDQTIKLWDVRKF---SNKTAQRNTFRAVCEQNWEYRR 109 (118)
Q Consensus 70 -----------------------------~~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~ 109 (118)
.++|+.|++|++||++.. .....+..|...|..+.|++..
T Consensus 153 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~ 224 (316)
T 3bg1_A 153 CNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSI 224 (316)
T ss_dssp BCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCS
T ss_pred cceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCC
Confidence 156788999999999765 3445667888899999998753
No 47
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.66 E-value=2.3e-15 Score=99.41 Aligned_cols=103 Identities=10% Similarity=0.070 Sum_probs=80.8
Q ss_pred ccccCceEEEEeCCCC----CCCCCCceeeec-CccCcEEEEEeCC--CCCeEEEeeCCCcEEEEecCCCCc--------
Q psy1285 6 QVASLVTCFVWDRRTL----NETTAKPVGVLA-GHRDGITFIDPKG--DSRHLISNSKDQTIKLWDVRKFNG-------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~----~~~~~~~~~~~~-~h~~~v~~~~~~~--~~~~l~s~~~d~~i~~wd~~~~~~-------- 70 (118)
+++.|++|++|+.... +......+..+. +|.+.|.+++|+| +++++++++.|++|++||+++...
T Consensus 90 s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~ 169 (343)
T 3lrv_A 90 SRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS 169 (343)
T ss_dssp EECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCS
T ss_pred EecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCC
Confidence 6788999999987631 011133333333 6778999999999 999999999999999999986432
Q ss_pred ----------------cceecCCcEEEEeCCCCcce-eeecc-cCcceeeEeeeee
Q psy1285 71 ----------------AANSKDQTIKLWDVRKFSNK-TAQRN-TFRAVCEQNWEYR 108 (118)
Q Consensus 71 ----------------~s~~~d~~i~iwd~~~~~~~-~~~~~-~~~~v~~~~~~~~ 108 (118)
++|+.|+.|++||++++... ..+.. |...|..+.|++.
T Consensus 170 ~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~ 225 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADN 225 (343)
T ss_dssp SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTT
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCC
Confidence 67889999999999999887 66776 8899999998754
No 48
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.66 E-value=1.6e-15 Score=113.55 Aligned_cols=98 Identities=19% Similarity=0.249 Sum_probs=88.4
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||+|++||+.. ...+..+.+|.+.|.+++|+|+++++++++.|+.|++||+.+...
T Consensus 632 s~~~d~~i~vw~~~~-----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~ 706 (1249)
T 3sfz_A 632 SCGADKTLQVFKAET-----GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCH 706 (1249)
T ss_dssp EEETTSCEEEEETTT-----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEeCCCeEEEEECCC-----CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEE
Confidence 678899999999987 678888999999999999999999999999999999999986543
Q ss_pred ----------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 ----------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ----------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|+.|++||++++.....+..|...|..+.|++.
T Consensus 707 ~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~ 754 (1249)
T 3sfz_A 707 FTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPD 754 (1249)
T ss_dssp ECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSS
T ss_pred EecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecC
Confidence 67889999999999999988888889999999888764
No 49
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.66 E-value=7e-16 Score=104.36 Aligned_cols=95 Identities=17% Similarity=0.265 Sum_probs=79.0
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecC--ccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc-------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAG--HRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------- 70 (118)
+++.|+.|++||++. .+++..+.+ |.+.|.+++|+|++++|++++.|+.|++||++....
T Consensus 187 ~~~~d~~i~iwd~~~-----~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 261 (437)
T 3gre_A 187 ALTNLSRVIIFDIRT-----LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPIT 261 (437)
T ss_dssp EEETTSEEEEEETTT-----CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEE
T ss_pred EEeCCCeEEEEeCCC-----CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceE
Confidence 677899999999987 677888887 899999999999999999999999999999976332
Q ss_pred ---------------cceecCCcEEEEeCCCCcceeeecccCcceeeEee
Q psy1285 71 ---------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNW 105 (118)
Q Consensus 71 ---------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 105 (118)
++|+.|+.|++||++++.....+..+...+....|
T Consensus 262 ~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 311 (437)
T 3gre_A 262 HVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHF 311 (437)
T ss_dssp EEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGG
T ss_pred EEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCcccee
Confidence 67788999999999999887777655544443333
No 50
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.65 E-value=8.8e-16 Score=100.64 Aligned_cols=100 Identities=18% Similarity=0.141 Sum_probs=79.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCC--CCCeEEEeeCCCcEEEEecCCCCc-------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKG--DSRHLISNSKDQTIKLWDVRKFNG------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~~wd~~~~~~------------- 70 (118)
+++.|++|+|||+... ....+..+.+|.+.|.+++|++ ++++|++++.|++|++||+++...
T Consensus 30 sgs~D~~v~lwd~~~~---~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V 106 (316)
T 3bg1_A 30 TCSSDRSVKIFDVRNG---GQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSV 106 (316)
T ss_dssp EEETTTEEEEEEEETT---EEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCC
T ss_pred EEeCCCeEEEEEecCC---CcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCce
Confidence 7789999999999752 1234677889999999999986 489999999999999999975421
Q ss_pred --------------cceecCCcEEEEeCCCCcc---eeeecccCcceeeEeeeee
Q psy1285 71 --------------AANSKDQTIKLWDVRKFSN---KTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------------~s~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|++|++||++.... ...+..|...+..+.|++.
T Consensus 107 ~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 107 NSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp CEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 6788899999999987643 2334477777888888765
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.65 E-value=3.6e-15 Score=100.13 Aligned_cols=97 Identities=21% Similarity=0.182 Sum_probs=81.4
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||.|++||+.. ......+.+|.+.|.+++|+|++++|++++.|+.|++||+++...
T Consensus 114 ~~~~dg~i~iwd~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~ 188 (420)
T 3vl1_A 114 LGTTEGDIKVLDSNF-----NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIA 188 (420)
T ss_dssp EEETTSCEEEECTTS-----CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEE
T ss_pred EEECCCCEEEEeCCC-----cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEE
Confidence 667899999999986 666777789999999999999999999999999999999986543
Q ss_pred --------cceecCCcEEEEeCCCCcceeeecc---cCcceeeEeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNKTAQRN---TFRAVCEQNWEY 107 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~~ 107 (118)
++++.|++|++||+++++....+.. +...+..+.|.+
T Consensus 189 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 236 (420)
T 3vl1_A 189 IIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFV 236 (420)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEE
T ss_pred EcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEec
Confidence 7889999999999999988877653 445566666543
No 52
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.64 E-value=1.1e-15 Score=100.57 Aligned_cols=83 Identities=22% Similarity=0.305 Sum_probs=72.0
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCC-CCCeEEEeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKG-DSRHLISNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+++.||.|++||+.. .+.+..+.+|...|.+++|+| ++.+|++++.|+.|++||+++...
T Consensus 90 ~~~~dg~i~v~d~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v 164 (366)
T 3k26_A 90 VAGSRGIIRIINPIT-----MQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV 164 (366)
T ss_dssp EEETTCEEEEECTTT-----CCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE
T ss_pred EecCCCEEEEEEchh-----ceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCce
Confidence 578899999999987 677888889999999999999 899999999999999999975322
Q ss_pred ------------cceecCCcEEEEeCCCCcceeee
Q psy1285 71 ------------AANSKDQTIKLWDVRKFSNKTAQ 93 (118)
Q Consensus 71 ------------~s~~~d~~i~iwd~~~~~~~~~~ 93 (118)
++++.|+.|++||+++.+....+
T Consensus 165 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 199 (366)
T 3k26_A 165 LSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAI 199 (366)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHH
T ss_pred eEEEECCCCCEEEEecCCCCEEEEECCCCcccccc
Confidence 77889999999999987665433
No 53
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.64 E-value=4.8e-15 Score=104.73 Aligned_cols=95 Identities=12% Similarity=0.182 Sum_probs=76.5
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc------------------
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------------ 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------------ 70 (118)
.++.|++|++.. ......+.+|.+.|.+++|+|+|++|++|+.|++|+|||+.+...
T Consensus 37 ~~~~v~l~~~~~-----~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~f 111 (611)
T 1nr0_A 37 NGTSVYTVPVGS-----LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISW 111 (611)
T ss_dssp ETTEEEEEETTC-----SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEE
T ss_pred CCCEEEEecCCC-----cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEE
Confidence 467999999986 677788899999999999999999999999999999999842110
Q ss_pred ----------------------------------------------------cceecCCcEEEEeCCCCcceeeecccCc
Q psy1285 71 ----------------------------------------------------AANSKDQTIKLWDVRKFSNKTAQRNTFR 98 (118)
Q Consensus 71 ----------------------------------------------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 98 (118)
++|+.|++|++||.++.+....+.+|..
T Consensus 112 s~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~ 191 (611)
T 1nr0_A 112 DSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK 191 (611)
T ss_dssp CTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS
T ss_pred CCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccC
Confidence 4566778888888777766666777777
Q ss_pred ceeeEeeeee
Q psy1285 99 AVCEQNWEYR 108 (118)
Q Consensus 99 ~v~~~~~~~~ 108 (118)
.|..+.|++.
T Consensus 192 ~V~~v~fspd 201 (611)
T 1nr0_A 192 FVHSVRYNPD 201 (611)
T ss_dssp CEEEEEECTT
T ss_pred ceEEEEECCC
Confidence 7777777653
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.64 E-value=5.2e-15 Score=100.13 Aligned_cols=97 Identities=18% Similarity=0.331 Sum_probs=79.1
Q ss_pred ccccCceEEEEeCCCCCCCCCCceee--ecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc-------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGV--LAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------- 70 (118)
-++.|++|+|||..+ ++.... +.+|...|.+++|+|+|++|++|+.|++|++||+.+...
T Consensus 120 Avgld~tV~lWd~~t-----g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~ 194 (420)
T 4gga_A 120 AVALDNSVYLWSASS-----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS 194 (420)
T ss_dssp EEEETTEEEEEETTT-----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EEEeCCEEEEEECCC-----CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEE
Confidence 356799999999987 555544 456788899999999999999999999999999987543
Q ss_pred --------cceecCCcEEEEeCCCCcce-eeecccCcceeeEeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNK-TAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~ 107 (118)
++|+.|+.+++||.+..... ..+..|...+..+.|++
T Consensus 195 ~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~ 240 (420)
T 4gga_A 195 LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 240 (420)
T ss_dssp EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT
T ss_pred EeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC
Confidence 78899999999999876654 44567877777777754
No 55
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.63 E-value=3.9e-15 Score=103.61 Aligned_cols=96 Identities=23% Similarity=0.331 Sum_probs=81.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|++|++||.. .+.+..+.+|...|.+++|+|++++|++++.|++|++||......
T Consensus 443 ~~~~d~~v~~w~~~------~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~ 516 (577)
T 2ymu_A 443 SASDDKTVKLWNRN------GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAF 516 (577)
T ss_dssp EEETTSEEEEEETT------SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEE
T ss_pred EEcCCCEEEEEECC------CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEE
Confidence 67889999999975 467778889999999999999999999999999999999643111
Q ss_pred -------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 -------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||. +++....+.+|...|..+.|++.
T Consensus 517 s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~d 560 (577)
T 2ymu_A 517 SPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPD 560 (577)
T ss_dssp CTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTT
T ss_pred cCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCC
Confidence 78899999999995 56777778899999999998754
No 56
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.63 E-value=3.8e-15 Score=99.58 Aligned_cols=94 Identities=11% Similarity=0.019 Sum_probs=75.1
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc-----------------
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG----------------- 70 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~----------------- 70 (118)
+.|++|+|||+.. .++...+. |.+.|.+++|+|+++++++++.++ +.+|+..+...
T Consensus 154 ~~d~~i~iwd~~~-----~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 154 KVPAIMRIIDPSD-----LTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKIN 226 (365)
T ss_dssp CSSCEEEEEETTT-----TEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEE
T ss_pred CCCCEEEEeECCC-----CcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEE
Confidence 3589999999987 66666665 778899999999999999988655 44444433211
Q ss_pred ----------------------------------------------------------cceecCCcEEEEeCCCCcceee
Q psy1285 71 ----------------------------------------------------------AANSKDQTIKLWDVRKFSNKTA 92 (118)
Q Consensus 71 ----------------------------------------------------------~s~~~d~~i~iwd~~~~~~~~~ 92 (118)
++|+.|++|+|||+++++.+..
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~ 306 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKI 306 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEE
Confidence 7889999999999999998887
Q ss_pred e-cccCcceeeEeeeee
Q psy1285 93 Q-RNTFRAVCEQNWEYR 108 (118)
Q Consensus 93 ~-~~~~~~v~~~~~~~~ 108 (118)
+ .+|...|+.+.|++.
T Consensus 307 ~~~gH~~~V~~v~fSpd 323 (365)
T 4h5i_A 307 FKQAHSFAITEVTISPD 323 (365)
T ss_dssp ETTSSSSCEEEEEECTT
T ss_pred ecCcccCCEEEEEECCC
Confidence 6 589999999999864
No 57
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.62 E-value=7.5e-15 Score=99.97 Aligned_cols=98 Identities=19% Similarity=0.355 Sum_probs=86.7
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeC--CCCCeEEEeeCCCcEEEEecCCCCc-------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPK--GDSRHLISNSKDQTIKLWDVRKFNG------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~s~~~d~~i~~wd~~~~~~------------- 70 (118)
+++.||+|++||+.. .+....+.+|.+.|.+++|+ +++.++++++.|++|++||+++...
T Consensus 178 s~s~dg~i~vwd~~~-----~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 252 (464)
T 3v7d_B 178 SGSTDRTVRVWDIKK-----GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV 252 (464)
T ss_dssp EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEE
T ss_pred EEeCCCCEEEEECCC-----CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceE
Confidence 678899999999987 67788889999999999998 5778999999999999999976420
Q ss_pred -------------------------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 -------------------------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -------------------------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|+.|++||+++.+....+..|...+..+.|++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (464)
T 3v7d_B 253 FHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHE 321 (464)
T ss_dssp ESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT
T ss_pred eeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCC
Confidence 67889999999999999998888889999999999764
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.61 E-value=5.3e-15 Score=98.19 Aligned_cols=101 Identities=12% Similarity=-0.015 Sum_probs=80.0
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecC-ccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAG-HRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN--------------- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--------------- 69 (118)
+++.|+.|++||++... .......+.+ |...|.+++|+|++++|++++.|++|++||++...
T Consensus 117 ~~~~d~~i~iwd~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 194 (377)
T 3dwl_C 117 VGSGARVISVCYFEQEN--DWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLP 194 (377)
T ss_dssp EEESSSCEEECCC-------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCC
T ss_pred EEecCCeEEEEEECCcc--cceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccc
Confidence 67789999999998621 0124566777 99999999999999999999999999999984110
Q ss_pred -----------c--------------cceecCCcEEEEeCCCCcc----eeeecccCcceeeEeeeee
Q psy1285 70 -----------G--------------AANSKDQTIKLWDVRKFSN----KTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 70 -----------~--------------~s~~~d~~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~ 108 (118)
. ++++.|++|++||++++.. ...+..|...+..+.|++.
T Consensus 195 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 262 (377)
T 3dwl_C 195 FNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANE 262 (377)
T ss_dssp EEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEET
T ss_pred hhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCC
Confidence 0 7889999999999999987 6677788888999999864
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.61 E-value=1.6e-14 Score=97.10 Aligned_cols=98 Identities=16% Similarity=0.251 Sum_probs=81.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecC-ccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAG-HRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+++.|+.|++||+.. +.....+.. |.+.|.+++|+|++.+|++++.||.|++||+.+...
T Consensus 108 ~~~~d~~v~lw~~~~-----~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 182 (401)
T 4aez_A 108 AVALERNVYVWNADS-----GSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCL 182 (401)
T ss_dssp EEEETTEEEEEETTT-----CCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EEECCCeEEEeeCCC-----CcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEE
Confidence 677899999999987 555555553 889999999999999999999999999999986543
Q ss_pred -------cceecCCcEEEEeCCCC-cceeeecccCcceeeEeeeee
Q psy1285 71 -------AANSKDQTIKLWDVRKF-SNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -------~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||++.. .....+..|...+..+.|++.
T Consensus 183 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 183 SWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSD 228 (401)
T ss_dssp EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT
T ss_pred EECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCC
Confidence 78899999999999954 445566688899999999763
No 60
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.61 E-value=3.7e-15 Score=104.19 Aligned_cols=102 Identities=13% Similarity=0.072 Sum_probs=77.4
Q ss_pred ccccCceEEEEeCCCCCCC------CCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------
Q psy1285 6 QVASLVTCFVWDRRTLNET------TAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------- 70 (118)
+++.||+|+|||+...... ...+...+.+|...|.+++|+++ ..|++|+.||+|++||+++...
T Consensus 230 s~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~ 308 (524)
T 2j04_B 230 FVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHD 308 (524)
T ss_dssp EEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSS
T ss_pred EEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeeccc
Confidence 5788999999999763211 12344577889999999999985 4899999999999999975321
Q ss_pred ------------------cceecCCcEEEEeCCCCcceeeecccCc--ceeeEeeeee
Q psy1285 71 ------------------AANSKDQTIKLWDVRKFSNKTAQRNTFR--AVCEQNWEYR 108 (118)
Q Consensus 71 ------------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~ 108 (118)
++++.|++|++||+++++....+..|.. .+..+.|++.
T Consensus 309 ~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~ 366 (524)
T 2j04_B 309 SYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ 366 (524)
T ss_dssp SCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT
T ss_pred ccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCC
Confidence 6788999999999998877665554432 3566777654
No 61
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.61 E-value=2.2e-14 Score=95.45 Aligned_cols=100 Identities=15% Similarity=0.188 Sum_probs=83.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceee---------------ecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGV---------------LAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~---------------~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 70 (118)
+++.||.|++||++... ..... ..+|...|.+++|+|++++|++++.|+.|++||+++...
T Consensus 204 ~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 204 TASADSRVKLWDVRRAS----GCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp EEETTSCEEEEETTCSS----CCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred EEcCCCcEEEEECCCCC----cccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 67789999999998631 12222 257889999999999999999999999999999986432
Q ss_pred ----------------------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeeec
Q psy1285 71 ----------------------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYRR 109 (118)
Q Consensus 71 ----------------------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 109 (118)
+.++.++.|++||+.++.....+..|...|..+.|++.-
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 346 (408)
T 4a11_B 280 TLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNF 346 (408)
T ss_dssp CCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTT
T ss_pred ceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCC
Confidence 556789999999999999999998999999999998653
No 62
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.61 E-value=1.2e-14 Score=98.76 Aligned_cols=103 Identities=24% Similarity=0.454 Sum_probs=82.7
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCC-eEEEeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSR-HLISNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+++.||.|++||++... ...+...+..|...|.+++|+|++. .+++++.|+.|++||+++...
T Consensus 249 s~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~ 326 (430)
T 2xyi_A 249 SVADDQKLMIWDTRNNN--TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ 326 (430)
T ss_dssp EEETTSEEEEEETTCSC--SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEE
T ss_pred EEeCCCeEEEEECCCCC--CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEE
Confidence 67789999999998631 1256677788999999999999887 688999999999999987432
Q ss_pred -----------cceecCCcEEEEeCCCC--------------cceeeecccCcceeeEeeeeecc
Q psy1285 71 -----------AANSKDQTIKLWDVRKF--------------SNKTAQRNTFRAVCEQNWEYRRE 110 (118)
Q Consensus 71 -----------~s~~~d~~i~iwd~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~ 110 (118)
++++.|+.|++||++.. ........|...+..+.|++.-+
T Consensus 327 i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 391 (430)
T 2xyi_A 327 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 391 (430)
T ss_dssp EEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSST
T ss_pred EEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCC
Confidence 67888999999999872 33445557888899999987644
No 63
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.60 E-value=1.3e-14 Score=94.32 Aligned_cols=102 Identities=21% Similarity=0.199 Sum_probs=79.2
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCC--CCCeEEEeeCCCcEEEEecCCCC---------c----
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKG--DSRHLISNSKDQTIKLWDVRKFN---------G---- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~~wd~~~~~---------~---- 70 (118)
+++.||.|++||+.... ........+.+|.+.|.+++|+| ++.+|++++.|+.|++||++... .
T Consensus 28 ~~~~dg~i~iw~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 106 (351)
T 3f3f_A 28 TCSSDQHIKVFKLDKDT-SNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL 106 (351)
T ss_dssp EEETTSEEEEEEECSSS-CCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE
T ss_pred EeeCCCeEEEEECCCCC-CcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeee
Confidence 67889999999998621 11145667788999999999999 59999999999999999997642 0
Q ss_pred ---------------------cceecCCcEEEEeCCCCcceeeec-------------ccCcceeeEeeeee
Q psy1285 71 ---------------------AANSKDQTIKLWDVRKFSNKTAQR-------------NTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ---------------------~s~~~d~~i~iwd~~~~~~~~~~~-------------~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||+++......+. .+...+..+.|++.
T Consensus 107 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 178 (351)
T 3f3f_A 107 NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPS 178 (351)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCC
T ss_pred cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccC
Confidence 677889999999999887654322 45566777777654
No 64
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.60 E-value=5.2e-15 Score=106.47 Aligned_cols=97 Identities=14% Similarity=0.127 Sum_probs=84.8
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||.|+|||+.. +.....+.+|.+.|.+++|+|+++.|++++.|+.|++||+.+...
T Consensus 30 ~~~~~g~v~iwd~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~ 104 (814)
T 3mkq_A 30 TTLYSGRVEIWNYET-----QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIA 104 (814)
T ss_dssp EEETTSEEEEEETTT-----TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEeCCCEEEEEECCC-----CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEE
Confidence 567799999999987 677888889999999999999999999999999999999986543
Q ss_pred --------cceecCCcEEEEeCCCC-cceeeecccCcceeeEeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKF-SNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~ 107 (118)
++++.|+.|++||+.+. .....+..|...+..+.|++
T Consensus 105 ~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p 150 (814)
T 3mkq_A 105 VHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (814)
T ss_dssp ECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEET
T ss_pred EeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEc
Confidence 77889999999999987 44556668888999999986
No 65
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.60 E-value=2.6e-14 Score=93.92 Aligned_cols=58 Identities=29% Similarity=0.416 Sum_probs=53.1
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCC
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKF 68 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 68 (118)
+++.||.|++||+.. .+....+.+|.+.|.+++|+|++++|++++.|+.|++||+.+.
T Consensus 49 ~~~~dg~i~vwd~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 106 (369)
T 3zwl_B 49 SCSKDSSASVWYSLN-----GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNG 106 (369)
T ss_dssp EEESSSCEEEEETTT-----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred EEeCCCEEEEEeCCC-----chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 667899999999987 6788889999999999999999999999999999999998764
No 66
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.60 E-value=4.1e-14 Score=92.04 Aligned_cols=98 Identities=17% Similarity=0.222 Sum_probs=80.6
Q ss_pred cCceEEEEeCCCCCCCCCCceeeec--CccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc----------------
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLA--GHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG---------------- 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~---------------- 70 (118)
.||.|++||+..... ......+. +|...|.+++|+|+++++++++.|+.|++||+.+...
T Consensus 70 ~dg~i~iw~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~ 147 (337)
T 1gxr_A 70 GKGCVKVWDISHPGN--KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYAL 147 (337)
T ss_dssp CBSEEEEEETTSTTC--CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEE
T ss_pred CCCeEEEEECCCCCc--eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEE
Confidence 399999999986322 22333333 7899999999999999999999999999999987542
Q ss_pred ---------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 ---------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ---------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||+++.+....+..|...+..+.|++.
T Consensus 148 ~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~ 194 (337)
T 1gxr_A 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND 194 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCC
Confidence 67888999999999999888888888888999988764
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.59 E-value=1.9e-14 Score=98.03 Aligned_cols=96 Identities=25% Similarity=0.335 Sum_probs=79.1
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|+.|++||++. ..++..+.+|.+.|.+++|+|+++.+++++.|+.|++||+++...
T Consensus 285 ~~~~d~~i~vwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~ 359 (464)
T 3v7d_B 285 SGSYDNTLIVWDVAQ-----MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLR 359 (464)
T ss_dssp EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEeCCCeEEEEECCC-----CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEE
Confidence 567899999999987 778888899999999999999999999999999999999986543
Q ss_pred ------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeee
Q psy1285 71 ------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 ------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 107 (118)
++++.|++|++||+++........ +...+..+.|++
T Consensus 360 ~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~ 401 (464)
T 3v7d_B 360 LSDKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYV 401 (464)
T ss_dssp ECSSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEE
T ss_pred EcCCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEe
Confidence 788999999999999887655443 333444444543
No 68
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.59 E-value=3.3e-14 Score=95.60 Aligned_cols=101 Identities=19% Similarity=0.303 Sum_probs=83.2
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||.|++||++.. ......+.+|.+.|.+++|+|++++|++++.|+.|++||+++...
T Consensus 191 ~~~~dg~i~i~d~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~ 266 (401)
T 4aez_A 191 SGSRSGAIHHHDVRIA----NHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVA 266 (401)
T ss_dssp EEETTSEEEEEETTSS----SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEE
T ss_pred EEcCCCCEEEEecccC----cceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEE
Confidence 6778999999999842 566777889999999999999999999999999999999986433
Q ss_pred ---------ccee--cCCcEEEEeCCCCcceeeecccCcceeeEeeeeeccc
Q psy1285 71 ---------AANS--KDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYRREN 111 (118)
Q Consensus 71 ---------~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 111 (118)
++++ .|+.|++||++++.....+. +...+..+.|++....
T Consensus 267 ~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~ 317 (401)
T 4aez_A 267 WCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKE 317 (401)
T ss_dssp ECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSE
T ss_pred ECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCe
Confidence 4433 79999999999998877775 5567888888765443
No 69
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.59 E-value=3.4e-14 Score=96.43 Aligned_cols=94 Identities=26% Similarity=0.415 Sum_probs=80.7
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||.|++||+.. .+....+.+|.+.|.+++| +++.+++|+.||+|++||+.+...
T Consensus 148 ~g~~dg~i~iwd~~~-----~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~ 220 (435)
T 1p22_A 148 SGLRDNTIKIWDKNT-----LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR 220 (435)
T ss_dssp EEESSSCEEEEESSS-----CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEE
T ss_pred EEeCCCeEEEEeCCC-----CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence 678899999999987 6788889999999999999 688999999999999999987543
Q ss_pred ------cceecCCcEEEEeCCCCcce---eeecccCcceeeEeee
Q psy1285 71 ------AANSKDQTIKLWDVRKFSNK---TAQRNTFRAVCEQNWE 106 (118)
Q Consensus 71 ------~s~~~d~~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~ 106 (118)
++|+.|+.|++||+++.... ..+..|...+..+.|+
T Consensus 221 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 265 (435)
T 1p22_A 221 FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD 265 (435)
T ss_dssp CCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE
T ss_pred EcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC
Confidence 78899999999999988765 4455788888887774
No 70
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.59 E-value=2e-14 Score=95.66 Aligned_cols=100 Identities=18% Similarity=0.253 Sum_probs=82.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeee-------------cCccCcEEEEEeCC-CCCeEEEeeCCCcEEEEecCCCCc-
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVL-------------AGHRDGITFIDPKG-DSRHLISNSKDQTIKLWDVRKFNG- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~-------------~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~~- 70 (118)
+++.||.|++||+... .....+ .+|...|.+++|+| ++.++++++.|+.|++||+.+...
T Consensus 61 ~~~~dg~i~iw~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 135 (408)
T 4a11_B 61 SGGSDGVIVLYDLENS-----SRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA 135 (408)
T ss_dssp EEETTSCEEEEECCCC-----SSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE
T ss_pred EEcCCCeEEEEECCCC-----cccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc
Confidence 6778999999999863 222211 25999999999999 788999999999999999986432
Q ss_pred ------------------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeeecc
Q psy1285 71 ------------------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYRRE 110 (118)
Q Consensus 71 ------------------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 110 (118)
++++.|+.|++||++++.....+..|...+..+.|++.-.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 136 DVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYD 199 (408)
T ss_dssp EEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCT
T ss_pred eeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCC
Confidence 6778899999999999988888888999999999987644
No 71
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.59 E-value=1.4e-14 Score=96.35 Aligned_cols=82 Identities=13% Similarity=0.112 Sum_probs=65.6
Q ss_pred cccCceEEEEeCCCCCC----------CCCCc-eeeecCccCcEEEEEeCCCCCeEEEeeCCCc-EEEEecCCCCc----
Q psy1285 7 VASLVTCFVWDRRTLNE----------TTAKP-VGVLAGHRDGITFIDPKGDSRHLISNSKDQT-IKLWDVRKFNG---- 70 (118)
Q Consensus 7 ~~~dg~v~iwd~~~~~~----------~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~-i~~wd~~~~~~---- 70 (118)
.+.||.|++||++.... ....+ ...+.+|.+.|.+++|+|++++|++++.|++ |++||+++...
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 46789999999986210 00113 6778899999999999999999999999998 99999985432
Q ss_pred ---------------------cceecCCcEEEEeCCCCc
Q psy1285 71 ---------------------AANSKDQTIKLWDVRKFS 88 (118)
Q Consensus 71 ---------------------~s~~~d~~i~iwd~~~~~ 88 (118)
++++.|++|++||++...
T Consensus 235 ~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 235 RRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp ECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 788999999999998764
No 72
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1.3e-14 Score=95.73 Aligned_cols=100 Identities=17% Similarity=0.175 Sum_probs=82.4
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCC--CCeEEEeeCCCcEEEEecCCCC--c-----------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGD--SRHLISNSKDQTIKLWDVRKFN--G----------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~~wd~~~~~--~----------- 70 (118)
+++.||.|+|||+... .......+.+|.+.|.+++|+++ +++|++++.|+.|++||+.+.. .
T Consensus 28 ~~~~dg~i~iw~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v 104 (379)
T 3jrp_A 28 TCSSDKTIKIFEVEGE---THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASV 104 (379)
T ss_dssp EEETTSCEEEEEEETT---EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE
T ss_pred EEECCCcEEEEecCCC---cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcce
Confidence 6678999999999731 25667788899999999999976 8999999999999999998653 1
Q ss_pred --------------cceecCCcEEEEeCCCCcce--eeecccCcceeeEeeeee
Q psy1285 71 --------------AANSKDQTIKLWDVRKFSNK--TAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------------~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||++..... ..+..|...+..+.|++.
T Consensus 105 ~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 105 NSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred EEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 67788999999999988543 344578888999999874
No 73
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.58 E-value=1.6e-14 Score=96.27 Aligned_cols=99 Identities=14% Similarity=0.109 Sum_probs=81.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeee--cCccCcEEEEEeCC-CCCeEEEeeCCCcEEEEecCCCCc------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVL--AGHRDGITFIDPKG-DSRHLISNSKDQTIKLWDVRKFNG------------ 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~~------------ 70 (118)
+++.||.|+|||+.. ......+ .+|.+.|.+++|+| ++++|++++.|+.|++||++....
T Consensus 91 s~~~dg~i~iwd~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 165 (383)
T 3ei3_B 91 VGSKGGDIILWDYDV-----QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYW 165 (383)
T ss_dssp EEEBTSCEEEEETTS-----TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCC
T ss_pred EEcCCCeEEEEeCCC-----cccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCC
Confidence 677899999999986 4444444 36999999999999 789999999999999999874211
Q ss_pred -------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeeecc
Q psy1285 71 -------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYRRE 110 (118)
Q Consensus 71 -------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 110 (118)
++++.|+.|++||++ ......+..|...|..+.|++.-.
T Consensus 166 v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 166 YCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCT
T ss_pred eEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCC
Confidence 778899999999994 666677778889999999987644
No 74
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.58 E-value=2.1e-14 Score=94.82 Aligned_cols=83 Identities=17% Similarity=0.021 Sum_probs=66.5
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeec-CccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLA-GHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+++.||+|++||++. ........ .|...+.+++|+|++.++++|+.|+.|++||+++...
T Consensus 144 s~s~dg~i~~wd~~~-----~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~ 218 (343)
T 3lrv_A 144 WADNRGTIGFQSYED-----DSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIK 218 (343)
T ss_dssp EEETTCCEEEEESSS-----SCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEE
T ss_pred EEeCCCcEEEEECCC-----CcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEE
Confidence 678899999999987 45554443 4566899999999999999999999999999976432
Q ss_pred -----------cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 -----------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 -----------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
++++ |+.|++||+++......+.
T Consensus 219 ~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~ 252 (343)
T 3lrv_A 219 EVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYP 252 (343)
T ss_dssp EEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSC
T ss_pred EEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeec
Confidence 5566 5699999999987765443
No 75
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.58 E-value=3e-14 Score=94.03 Aligned_cols=98 Identities=12% Similarity=0.248 Sum_probs=82.0
Q ss_pred ccccCceEEEEeCCCCCCCCCC--ceeeecCccCcEEEEEeCCC--CCeEEEeeCCCcEEEEecCCCCc-----------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAK--PVGVLAGHRDGITFIDPKGD--SRHLISNSKDQTIKLWDVRKFNG----------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~~wd~~~~~~----------- 70 (118)
+++.||.|++||+.. .. ....+..|...|.+++|+|+ +.++++++.|+.|++||++....
T Consensus 74 s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 74 SCSYDGKVLIWKEEN-----GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp EEETTSCEEEEEEET-----TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred EeccCCEEEEEEcCC-----CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC
Confidence 678899999999986 33 66777889999999999998 99999999999999999976421
Q ss_pred ---------------------------cceecCCcEEEEeCCCCcce----eeecccCcceeeEeeeee
Q psy1285 71 ---------------------------AANSKDQTIKLWDVRKFSNK----TAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ---------------------------~s~~~d~~i~iwd~~~~~~~----~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||++..... ..+..|...+..+.|++.
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT 217 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCC
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCC
Confidence 56778999999999877643 345578888999999876
No 76
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.58 E-value=8e-15 Score=99.18 Aligned_cols=102 Identities=14% Similarity=0.127 Sum_probs=80.7
Q ss_pred ccccCceEEEEeCCCCCCCC-CCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCC----------------
Q psy1285 6 QVASLVTCFVWDRRTLNETT-AKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKF---------------- 68 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~---------------- 68 (118)
+++.||+|+|||+....... ......+ +|.+.|.+++|+|++.+|++++.|++|++||+...
T Consensus 81 s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~ 159 (437)
T 3gre_A 81 TGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRK 159 (437)
T ss_dssp EEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEE
Confidence 67899999999987511111 2223333 48999999999999999999999999999998410
Q ss_pred ---------------------Cc---cceecCCcEEEEeCCCCcceeeecc--cCcceeeEeeeee
Q psy1285 69 ---------------------NG---AANSKDQTIKLWDVRKFSNKTAQRN--TFRAVCEQNWEYR 108 (118)
Q Consensus 69 ---------------------~~---~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~ 108 (118)
.. ++++.|+.|++||+++.+....+.. |...|..+.|++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~ 225 (437)
T 3gre_A 160 INLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEE 225 (437)
T ss_dssp EEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTT
T ss_pred EEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCC
Confidence 01 7788999999999999999888876 7888999988754
No 77
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.57 E-value=3.7e-14 Score=96.35 Aligned_cols=93 Identities=25% Similarity=0.362 Sum_probs=79.6
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||+|++||+.. .+....+.+|.+.|.++.|+ +..+++++.|++|++||+.+...
T Consensus 134 sg~~dg~i~vwd~~~-----~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~ 206 (445)
T 2ovr_B 134 SGSDDNTLKVWSAVT-----GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 206 (445)
T ss_dssp EEETTSCEEEEETTT-----CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEECCCcEEEEECCC-----CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEE
Confidence 678899999999987 67788888999999999997 56899999999999999876432
Q ss_pred ------cceecCCcEEEEeCCCCcceeeecccCcceeeEee
Q psy1285 71 ------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNW 105 (118)
Q Consensus 71 ------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 105 (118)
++|+.|++|++||+++++....+..|...+..+.|
T Consensus 207 ~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 247 (445)
T 2ovr_B 207 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp EETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE
T ss_pred ecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE
Confidence 77888999999999988888777788888887776
No 78
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.57 E-value=7.5e-14 Score=94.77 Aligned_cols=94 Identities=22% Similarity=0.369 Sum_probs=79.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||+|++||+.. .+....+.+|.+.|.+++|++ ..+++++.|+.|++||+++...
T Consensus 188 sg~~dg~i~vwd~~~-----~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~ 260 (435)
T 1p22_A 188 TGSSDSTVRVWDVNT-----GEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN 260 (435)
T ss_dssp EEETTSCEEEEESSS-----CCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEE
T ss_pred EEcCCCeEEEEECCC-----CcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEE
Confidence 678899999999987 677888889999999999974 5899999999999999976432
Q ss_pred ---------cceecCCcEEEEeCCCCcceeeecccCcceeeEeee
Q psy1285 71 ---------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWE 106 (118)
Q Consensus 71 ---------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 106 (118)
++|+.|+.|++||++++.....+..|...+..+.|+
T Consensus 261 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 305 (435)
T 1p22_A 261 VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 305 (435)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE
T ss_pred EEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC
Confidence 677889999999999888888888888888877774
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.57 E-value=6.6e-14 Score=90.33 Aligned_cols=95 Identities=17% Similarity=0.102 Sum_probs=81.5
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||.|++||+.. ......+..|.+.|.+++|+|+++++++++.|+.+++|++.....
T Consensus 34 s~~~dg~v~vw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~ 108 (313)
T 3odt_A 34 SVSRDGTVRLWSKDD-----QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVC 108 (313)
T ss_dssp EEETTSEEEEEEESS-----SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEE
T ss_pred EEEcCCcEEEEECCC-----CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEE
Confidence 678899999999976 666777888999999999999999999999999999999876431
Q ss_pred ---------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeee
Q psy1285 71 ---------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 ---------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 107 (118)
++++.|+.|++|| .......+..|...+..+.|.+
T Consensus 109 ~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~ 152 (313)
T 3odt_A 109 SLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVS 152 (313)
T ss_dssp EEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEE
T ss_pred EEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEcc
Confidence 7788999999999 5556666678888888888876
No 80
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.57 E-value=7.1e-14 Score=94.95 Aligned_cols=105 Identities=21% Similarity=0.360 Sum_probs=83.2
Q ss_pred ccccCceEEEEeCCCCCCC--CCCceeeecCccCcEEEEEeCC-CCCeEEEeeCCCcEEEEecCCCC---c---------
Q psy1285 6 QVASLVTCFVWDRRTLNET--TAKPVGVLAGHRDGITFIDPKG-DSRHLISNSKDQTIKLWDVRKFN---G--------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~~---~--------- 70 (118)
+++.||.|++||+...... ...+...+.+|...|.+++|+| ++..+++++.|+.|++||+++.. .
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred EEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence 5678999999999862110 0122456678999999999999 67889999999999999998752 1
Q ss_pred ---------------cceecCCcEEEEeCCCC-cceeeecccCcceeeEeeeeecc
Q psy1285 71 ---------------AANSKDQTIKLWDVRKF-SNKTAQRNTFRAVCEQNWEYRRE 110 (118)
Q Consensus 71 ---------------~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~ 110 (118)
++|+.|+.|++||++.. .....+..|...+..+.|++.-.
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~ 334 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE 334 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCT
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCC
Confidence 68899999999999985 44566668888999999987543
No 81
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.57 E-value=4.7e-14 Score=94.22 Aligned_cols=98 Identities=19% Similarity=0.312 Sum_probs=86.4
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
.++.||.|++||++. ..+...+..|...|.+++|+|++++|++++.|+.|++||+++...
T Consensus 222 ~~~~~g~i~~~d~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~ 296 (425)
T 1r5m_A 222 IPGPKGAIFVYQITE-----KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSAS 296 (425)
T ss_dssp EECGGGCEEEEETTC-----SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEE
T ss_pred EEcCCCeEEEEEcCC-----CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEE
Confidence 567789999999987 677777888999999999999999999999999999999986543
Q ss_pred -------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 -------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||+++......+..|...+..+.|++.
T Consensus 297 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 297 WVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQD 341 (425)
T ss_dssp EETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTT
T ss_pred ECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCC
Confidence 67888999999999999988888888888999888764
No 82
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.57 E-value=4e-14 Score=94.30 Aligned_cols=98 Identities=13% Similarity=0.133 Sum_probs=84.8
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecC---c---cCcEEEEEeCCCCCeEEEeeCC---CcEEEEecCCCC-------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAG---H---RDGITFIDPKGDSRHLISNSKD---QTIKLWDVRKFN------- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~---h---~~~v~~~~~~~~~~~l~s~~~d---~~i~~wd~~~~~------- 69 (118)
+++.|+.|++||++. ..++..+.. | ...|.+++|+|++++|++++.| +.|++||+++..
T Consensus 202 ~~~~dg~i~i~d~~~-----~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 202 TGFNNGTVQISELST-----LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp EECTTSEEEEEETTT-----TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred EEeCCCcEEEEECCC-----CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceecc
Confidence 567799999999987 677788888 8 9999999999999999999999 999999986421
Q ss_pred -------------c----------------cceecCCcEEEEeCCCCcceeeec------cc---------------Ccc
Q psy1285 70 -------------G----------------AANSKDQTIKLWDVRKFSNKTAQR------NT---------------FRA 99 (118)
Q Consensus 70 -------------~----------------~s~~~d~~i~iwd~~~~~~~~~~~------~~---------------~~~ 99 (118)
. ++++.|+.|++||+++.+....+. .| ...
T Consensus 277 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 356 (397)
T 1sq9_A 277 PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 356 (397)
T ss_dssp C--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred CcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCc
Confidence 1 778899999999999999888887 67 888
Q ss_pred eeeEeeeee
Q psy1285 100 VCEQNWEYR 108 (118)
Q Consensus 100 v~~~~~~~~ 108 (118)
|..+.|++.
T Consensus 357 v~~~~~~~~ 365 (397)
T 1sq9_A 357 VFDVKFLKK 365 (397)
T ss_dssp EEEEEEECT
T ss_pred eeEEEeccc
Confidence 999999876
No 83
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.57 E-value=5.2e-14 Score=92.43 Aligned_cols=89 Identities=18% Similarity=0.212 Sum_probs=73.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||.|++||+... .......+.+|.+.|.+++|+|++++|++++.|+.|++||+.+...
T Consensus 59 ~~~~dg~i~iw~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~ 135 (368)
T 3mmy_A 59 AGSWANDVRCWEVQDS---GQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHW 135 (368)
T ss_dssp EEETTSEEEEEEECTT---SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred EECCCCcEEEEEcCCC---CceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEE
Confidence 5678999999999852 1333367788999999999999999999999999999999986443
Q ss_pred ---------cceecCCcEEEEeCCCCcceeeecccC
Q psy1285 71 ---------AANSKDQTIKLWDVRKFSNKTAQRNTF 97 (118)
Q Consensus 71 ---------~s~~~d~~i~iwd~~~~~~~~~~~~~~ 97 (118)
++++.|+.|++||+++.+....+..+.
T Consensus 136 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 136 IKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp EECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred EeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 778889999999999988777665443
No 84
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.56 E-value=6.4e-14 Score=91.12 Aligned_cols=97 Identities=24% Similarity=0.342 Sum_probs=83.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||.|++||++. .+....+.+|.+.+.+++|+|+++.+++++.|+.|++||+++...
T Consensus 158 ~~~~dg~v~~~d~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~ 232 (337)
T 1gxr_A 158 SCCSDGNIAVWDLHN-----QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGY 232 (337)
T ss_dssp EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred EEeCCCcEEEEeCCC-----CceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEE
Confidence 567899999999987 677788888999999999999999999999999999999986543
Q ss_pred -------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 -------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.++.|++||++..... .+..|...+..+.|++.
T Consensus 233 s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~ 276 (337)
T 1gxr_A 233 CPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYC 276 (337)
T ss_dssp CTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTT
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCC
Confidence 67788999999999987654 55578888888888754
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.1e-13 Score=90.97 Aligned_cols=99 Identities=12% Similarity=0.030 Sum_probs=85.1
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||.|++||++.. ......+..|...|.+++|+|++++|++++.|+.|++||+++...
T Consensus 192 ~~~~dg~i~i~d~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 267 (369)
T 3zwl_B 192 AGHKDGKISKYDVSNN----YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVI 267 (369)
T ss_dssp EEETTSEEEEEETTTT----TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEE
T ss_pred EEcCCCEEEEEECCCC----cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEe
Confidence 5678999999999862 466777888999999999999999999999999999999987543
Q ss_pred -------cceecCC--------------cEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 -------AANSKDQ--------------TIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -------~s~~~d~--------------~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.++ .+++||..+......+..|...|..+.|++.
T Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~ 326 (369)
T 3zwl_B 268 TPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQ 326 (369)
T ss_dssp CSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred cCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCC
Confidence 4555555 8999999999999888889999999999764
No 86
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.56 E-value=3.5e-14 Score=95.04 Aligned_cols=103 Identities=13% Similarity=0.256 Sum_probs=84.4
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCC-CCeEEEeeCCCcEEEEecCCCC------c--------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGD-SRHLISNSKDQTIKLWDVRKFN------G-------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~~wd~~~~~------~-------- 70 (118)
+++.||.|++||+..... .......+.+|.+.|.+++|+|+ +++|++++.|+.|++||+.+.. .
T Consensus 84 ~~~~dg~v~vw~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 162 (416)
T 2pm9_A 84 GALDNGSLELYSTNEANN-AINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSM 162 (416)
T ss_dssp EEESSSCEEEECCSSTTS-CCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSC
T ss_pred EEccCCeEEEeecccccc-cccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccccc
Confidence 567899999999975211 12467778899999999999998 8999999999999999997654 1
Q ss_pred -------------------cceecCCcEEEEeCCCCcceeeeccc------CcceeeEeeeeec
Q psy1285 71 -------------------AANSKDQTIKLWDVRKFSNKTAQRNT------FRAVCEQNWEYRR 109 (118)
Q Consensus 71 -------------------~s~~~d~~i~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~ 109 (118)
++++.|+.|++||+++.+....+..+ ...+..+.|++.-
T Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 226 (416)
T 2pm9_A 163 SSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKN 226 (416)
T ss_dssp CSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSC
T ss_pred CCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCC
Confidence 67788999999999999888777654 6778888887653
No 87
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.56 E-value=2.6e-14 Score=94.30 Aligned_cols=98 Identities=15% Similarity=0.226 Sum_probs=80.9
Q ss_pred ccccCceEEEEeCCCCCCCCCC--ceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc-------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAK--PVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------- 70 (118)
+++.|+.|++||+.. .+ ....+.+|...|.+++|+|++++|++++.|+.|++||+.+...
T Consensus 25 ~~~~d~~v~i~~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v 99 (372)
T 1k8k_C 25 ICPNNHEVHIYEKSG-----NKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAA 99 (372)
T ss_dssp EECSSSEEEEEEEET-----TEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCE
T ss_pred EEeCCCEEEEEeCCC-----CcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCce
Confidence 566899999999986 44 7788889999999999999999999999999999999876431
Q ss_pred ------------cceecCCcEEEEeCCCCcc---eeee-cccCcceeeEeeeee
Q psy1285 71 ------------AANSKDQTIKLWDVRKFSN---KTAQ-RNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ------------~s~~~d~~i~iwd~~~~~~---~~~~-~~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||++.... ...+ ..|...+..+.|++.
T Consensus 100 ~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 153 (372)
T 1k8k_C 100 RCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN 153 (372)
T ss_dssp EEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT
T ss_pred eEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCC
Confidence 7788899999999998774 2233 366778888888753
No 88
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.56 E-value=3.2e-14 Score=96.70 Aligned_cols=85 Identities=18% Similarity=0.300 Sum_probs=70.6
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCC-eEEEeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSR-HLISNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+++.||.|++||++. ..+..+.+|.+.|.+++|+|++. ++++++.|++|++||+++...
T Consensus 226 ~g~~dg~i~~wd~~~------~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v 299 (435)
T 4e54_B 226 TGDNVGNVILLNMDG------KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPV 299 (435)
T ss_dssp EECSSSBEEEEESSS------CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCE
T ss_pred EEeCCCcEeeeccCc------ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccc
Confidence 567899999999973 45667789999999999999875 678999999999999976432
Q ss_pred ------------cceecCCcEEEEeCCCCcceeeeccc
Q psy1285 71 ------------AANSKDQTIKLWDVRKFSNKTAQRNT 96 (118)
Q Consensus 71 ------------~s~~~d~~i~iwd~~~~~~~~~~~~~ 96 (118)
++++.|++|++||++++.....+..|
T Consensus 300 ~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~ 337 (435)
T 4e54_B 300 NAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPH 337 (435)
T ss_dssp EECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCC
T ss_pred cceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecc
Confidence 78899999999999998876655433
No 89
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.56 E-value=6.5e-14 Score=97.45 Aligned_cols=96 Identities=23% Similarity=0.316 Sum_probs=81.8
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|+.|++||.. .+.+..+.+|...|.+++|+|++++|++++.|++|++||......
T Consensus 402 ~~~~d~~v~~~~~~------~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~ 475 (577)
T 2ymu_A 402 SASDDKTVKLWNRN------GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAF 475 (577)
T ss_dssp EEETTSEEEEECTT------CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEE
T ss_pred EEeCCCEEEEEeCC------CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEE
Confidence 57789999999964 567778889999999999999999999999999999999753211
Q ss_pred -------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 -------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|++|++||. +++....+..|...|+.+.|++.
T Consensus 476 spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~d 519 (577)
T 2ymu_A 476 SPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPD 519 (577)
T ss_dssp CTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTT
T ss_pred cCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCC
Confidence 77889999999995 56777788889999999998754
No 90
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.55 E-value=8.6e-14 Score=94.55 Aligned_cols=94 Identities=27% Similarity=0.411 Sum_probs=74.5
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||.|++||++. ...+..+.+|...|.++.| ++.++++++.|+.|++||+++...
T Consensus 254 ~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~ 326 (445)
T 2ovr_B 254 SGAYDFMVKVWDPET-----ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 326 (445)
T ss_dssp EEETTSCEEEEEGGG-----TEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE
T ss_pred EEcCCCEEEEEECCC-----CcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEE
Confidence 566788888888876 6677777888888888888 677888888889999998876543
Q ss_pred ------cceecCCcEEEEeCCCCcceeeecc---cCcceeeEeee
Q psy1285 71 ------AANSKDQTIKLWDVRKFSNKTAQRN---TFRAVCEQNWE 106 (118)
Q Consensus 71 ------~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~ 106 (118)
++|+.|+.|++||+++++....+.. |...+..+.|+
T Consensus 327 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 371 (445)
T 2ovr_B 327 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 371 (445)
T ss_dssp EETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC
T ss_pred EeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC
Confidence 6778899999999988887776654 66778777775
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.55 E-value=8.5e-14 Score=91.28 Aligned_cols=96 Identities=24% Similarity=0.431 Sum_probs=79.2
Q ss_pred ccccCceEEEEeCCCCCCCCCC-ceeeecCccCcEEEE------EeCCCCCeEEEeeCCCcEEEEecCCCC-c-------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAK-PVGVLAGHRDGITFI------DPKGDSRHLISNSKDQTIKLWDVRKFN-G------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~-~~~~~~~h~~~v~~~------~~~~~~~~l~s~~~d~~i~~wd~~~~~-~------- 70 (118)
+++.||.|++||+.. .. +...+.+|.+.|.++ +|+|++++|++++.|+.|++||+++.. .
T Consensus 85 ~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 85 TGDFGGNLHIWNLEA-----PEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp EEETTSCEEEECTTS-----CSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred EecCCCeEEEEeCCC-----CCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc
Confidence 567899999999987 44 777888999999999 457899999999999999999998643 1
Q ss_pred ------------------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeee
Q psy1285 71 ------------------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 ------------------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 107 (118)
++++.|+.|++||+++...... ..+...+..+.|++
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~ 219 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDR 219 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESC
T ss_pred CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCC
Confidence 5678899999999999886433 45777888888876
No 92
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.54 E-value=5.5e-14 Score=92.34 Aligned_cols=98 Identities=10% Similarity=0.141 Sum_probs=79.8
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecC-----ccCcEEEEEeCCC----CCeEEEeeCCCcEEEEecCCCCc------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAG-----HRDGITFIDPKGD----SRHLISNSKDQTIKLWDVRKFNG------ 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~----~~~l~s~~~d~~i~~wd~~~~~~------ 70 (118)
.++.++.|++||+.. ...+..+.. |.+.|.+++|+|+ +++|++++.|+.|++||+.+...
T Consensus 39 ~~~~~~~v~vw~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 113 (366)
T 3k26_A 39 ATVGSNRVTLYECHS-----QGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG 113 (366)
T ss_dssp EEEETTEEEEEEECG-----GGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES
T ss_pred EECCCCEEEEEEcCC-----CcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC
Confidence 445678999999986 444444443 5578999999998 67899999999999999986543
Q ss_pred ------------------cceecCCcEEEEeCCCCcceeee---cccCcceeeEeeeee
Q psy1285 71 ------------------AANSKDQTIKLWDVRKFSNKTAQ---RNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ------------------~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||+++++....+ ..|...+..+.|++.
T Consensus 114 ~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 114 HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 77889999999999999888777 578889999999764
No 93
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.54 E-value=5.1e-14 Score=101.73 Aligned_cols=100 Identities=17% Similarity=0.165 Sum_probs=82.8
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCC--CCeEEEeeCCCcEEEEecCCCCc-------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGD--SRHLISNSKDQTIKLWDVRKFNG------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~~wd~~~~~~------------- 70 (118)
+++.||.|++||+... .......+.+|.+.|.+++|+++ ++.+++++.||.|++||+.+...
T Consensus 26 tg~~dg~I~vwd~~~~---~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V 102 (753)
T 3jro_A 26 TCSSDKTIKIFEVEGE---THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASV 102 (753)
T ss_dssp EEETTTEEEEEEEETT---EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE
T ss_pred EEECCCcEEEEecCCC---CCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCe
Confidence 6778999999999741 25667788899999999999987 99999999999999999876531
Q ss_pred --------------cceecCCcEEEEeCCCCcce--eeecccCcceeeEeeeee
Q psy1285 71 --------------AANSKDQTIKLWDVRKFSNK--TAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------------~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|+.|++||++..... ..+..|...+..+.|++.
T Consensus 103 ~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 103 NSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred EEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCc
Confidence 67888999999999988443 344578888999999874
No 94
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.54 E-value=4.7e-14 Score=96.47 Aligned_cols=102 Identities=12% Similarity=0.036 Sum_probs=74.4
Q ss_pred ccccCceEEEEeCCCCCCC---CCC---ceeeecCccCcEEEEEeCCC-CCeEEEeeCCCcEEEEecCCCCc--------
Q psy1285 6 QVASLVTCFVWDRRTLNET---TAK---PVGVLAGHRDGITFIDPKGD-SRHLISNSKDQTIKLWDVRKFNG-------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~---~~~---~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~~wd~~~~~~-------- 70 (118)
+++.|+.|+|||+...... ... ....+.+|.+.|.+++|+|+ +.+|++++.|++|++||+++...
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 4567999999998752100 011 24556679999999999997 78999999999999999986421
Q ss_pred ---------------cceecCCcEEEEeCCCCcceeeeccc-------CcceeeEeeeee
Q psy1285 71 ---------------AANSKDQTIKLWDVRKFSNKTAQRNT-------FRAVCEQNWEYR 108 (118)
Q Consensus 71 ---------------~s~~~d~~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~ 108 (118)
++|+.|++|++||++ +.....+..+ ...+..+.|+..
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~ 251 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGT 251 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEET
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecC
Confidence 788999999999999 4433333222 236778888753
No 95
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.54 E-value=1.4e-13 Score=90.76 Aligned_cols=101 Identities=14% Similarity=-0.047 Sum_probs=81.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCcee-eecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecC------------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVG-VLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVR------------------ 66 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~------------------ 66 (118)
+++.|+.|++||++.... ..... ...+|...|.+++|+|+++++++++.|+.|++||++
T Consensus 113 ~~~~d~~v~i~d~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 190 (372)
T 1k8k_C 113 VGSGSRVISICYFEQEND--WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMP 190 (372)
T ss_dssp EEETTSSEEEEEEETTTT--EEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCC
T ss_pred EEeCCCEEEEEEecCCCc--ceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccc
Confidence 567899999999986210 11122 335789999999999999999999999999999964
Q ss_pred CCCc-----------------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 67 KFNG-----------------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 67 ~~~~-----------------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
.... ++++.|+.|++||+++++....+..+...+..+.|++.
T Consensus 191 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 255 (372)
T 1k8k_C 191 FGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITE 255 (372)
T ss_dssp TTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEET
T ss_pred hhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecC
Confidence 1111 77889999999999999988888888888999999864
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.54 E-value=7.5e-14 Score=100.86 Aligned_cols=100 Identities=12% Similarity=0.209 Sum_probs=82.6
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCC--CCeEEEeeCCCcEEEEecCCCCc-------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGD--SRHLISNSKDQTIKLWDVRKFNG------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~~wd~~~~~~------------- 70 (118)
+++.||.|++||+... .......+.+|...|.+++|+|+ +..+++++.|+.|++||++....
T Consensus 72 s~s~Dg~I~vwd~~~~---~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v 148 (753)
T 3jro_A 72 SCSYDGKVLIWKEENG---RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 148 (753)
T ss_dssp EEETTSCEEEEEEETT---EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCE
T ss_pred EEeCCCeEEEEECCCC---cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCce
Confidence 6788999999999862 11266777889999999999998 99999999999999999976511
Q ss_pred -------------------------cceecCCcEEEEeCCCCcc----eeeecccCcceeeEeeeee
Q psy1285 71 -------------------------AANSKDQTIKLWDVRKFSN----KTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -------------------------~s~~~d~~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|+.|++||++.... ...+..|...|..+.|++.
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~ 215 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT 215 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCC
T ss_pred EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccC
Confidence 5678899999999998743 3455678889999999876
No 97
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.54 E-value=8.5e-14 Score=93.14 Aligned_cols=99 Identities=16% Similarity=0.302 Sum_probs=83.7
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCc------cCcEEEEEeCCCC-CeEEEeeCCC---cEEEEecCCCC------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGH------RDGITFIDPKGDS-RHLISNSKDQ---TIKLWDVRKFN------ 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~-~~l~s~~~d~---~i~~wd~~~~~------ 69 (118)
+++.|+.|++||++. ......+..| ...+.+++|+|++ .++++++.|+ .|++||+++..
T Consensus 183 ~~~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~ 257 (416)
T 2pm9_A 183 SAGSSNFASIWDLKA-----KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTL 257 (416)
T ss_dssp EESSSSCEEEEETTT-----TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCC
T ss_pred EEcCCCCEEEEECCC-----CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEe
Confidence 567899999999987 5666666655 7889999999986 6899999998 99999998631
Q ss_pred --c------------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeeec
Q psy1285 70 --G------------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYRR 109 (118)
Q Consensus 70 --~------------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 109 (118)
. ++++.|+.|++||+++++....+..|...+..+.|++.-
T Consensus 258 ~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~ 317 (416)
T 2pm9_A 258 NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEA 317 (416)
T ss_dssp CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTC
T ss_pred ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCC
Confidence 1 678889999999999999888888888889999988754
No 98
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.53 E-value=4.1e-14 Score=94.48 Aligned_cols=98 Identities=18% Similarity=0.351 Sum_probs=83.8
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.|+.|++||++. ......+.+|...+.+++|+|++ .+++++.|+.|++||+++...
T Consensus 264 ~~~~d~~i~i~d~~~-----~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~ 337 (425)
T 1r5m_A 264 SASDDGTLRIWHGGN-----GNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGR 337 (425)
T ss_dssp EEETTSCEEEECSSS-----BSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred EEcCCCEEEEEECCC-----CccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEE
Confidence 567899999999987 67777888899999999999999 999999999999999986443
Q ss_pred --------cceecCCcEEEEeCCCCc--------------------ceeeecccCc--ceeeEeeeeec
Q psy1285 71 --------AANSKDQTIKLWDVRKFS--------------------NKTAQRNTFR--AVCEQNWEYRR 109 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~--------------------~~~~~~~~~~--~v~~~~~~~~~ 109 (118)
++++.|+.|++||+++.. ....+..|.. .+..+.|++.-
T Consensus 338 ~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 406 (425)
T 1r5m_A 338 ISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAG 406 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTS
T ss_pred EcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCC
Confidence 778889999999999887 6667777755 89999997653
No 99
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.53 E-value=1.5e-13 Score=90.23 Aligned_cols=57 Identities=23% Similarity=0.388 Sum_probs=48.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEe--CCCCCeEEEeeCCCcEEEEecCCC
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDP--KGDSRHLISNSKDQTIKLWDVRKF 68 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s~~~d~~i~~wd~~~~ 68 (118)
+++.||.|++||+.. ..... +.+|...|.+++| +++++++++++.|+.|++||+++.
T Consensus 103 s~~~dg~v~iwd~~~-----~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 103 TASCDKTAKMWDLSS-----NQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp EEETTSEEEEEETTT-----TEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS
T ss_pred EEcCCCcEEEEEcCC-----CCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC
Confidence 678899999999986 44443 5569999999999 899999999999999999998754
No 100
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.53 E-value=5e-14 Score=103.67 Aligned_cols=96 Identities=9% Similarity=0.110 Sum_probs=77.0
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||+|+||+... .+....+ .|...|.+++|+| +++|++++.|++|++||+.+...
T Consensus 34 sgs~Dg~I~lw~~~~-----~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~ 106 (902)
T 2oaj_A 34 IATVTGEVHIYGQQQ-----VEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDT 106 (902)
T ss_dssp EEETTSEEEEECSTT-----CEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEEC
T ss_pred EEeCCCEEEEEeCCC-----cEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEE
Confidence 678899999999875 4444433 4788999999999 88999999999999999986432
Q ss_pred -------cceecCCcEEEEeCCCCcce-----------eeecccCcceeeEeeeee
Q psy1285 71 -------AANSKDQTIKLWDVRKFSNK-----------TAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -------~s~~~d~~i~iwd~~~~~~~-----------~~~~~~~~~v~~~~~~~~ 108 (118)
++|+.|++|++||++..... .....|...|..+.|++.
T Consensus 107 sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 107 DASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp CTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 78899999999999987753 122467788888888864
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.52 E-value=1.2e-13 Score=89.06 Aligned_cols=95 Identities=21% Similarity=0.285 Sum_probs=81.4
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecC-ccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAG-HRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+++.|+.|++||. ......+.. |...+.+++|+|++. +++++.|+.|++||+++...
T Consensus 160 ~~~~d~~i~i~d~-------~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~ 231 (313)
T 3odt_A 160 TASADKTIKLWQN-------DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCI 231 (313)
T ss_dssp EEETTSCEEEEET-------TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEECCCCEEEEec-------CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEE
Confidence 6788999999994 345556665 899999999999887 89999999999999986543
Q ss_pred --------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|+.|++||+++++....+..+...+..+.|++.
T Consensus 232 ~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 277 (313)
T 3odt_A 232 KLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSN 277 (313)
T ss_dssp EECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTT
T ss_pred EEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccC
Confidence 78889999999999999988888888888998888754
No 102
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.51 E-value=1.8e-13 Score=91.08 Aligned_cols=95 Identities=18% Similarity=0.154 Sum_probs=75.0
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeec---CccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLA---GHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------ 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------ 70 (118)
+++.|+.|++||++. .....+. +|...|.+++|+|+++.|++++.|+.|++||++....
T Consensus 136 s~~~d~~i~iwd~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~ 209 (383)
T 3ei3_B 136 VSSIRGATTLRDFSG------SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTH 209 (383)
T ss_dssp EEETTTEEEEEETTS------CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEE
T ss_pred EEeCCCEEEEEECCC------CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEE
Confidence 578899999999984 3333343 3458899999999999999999999999999853211
Q ss_pred -----------cceecCCcEEEEeCCCC----cceeeecccCcceeeEeeee
Q psy1285 71 -----------AANSKDQTIKLWDVRKF----SNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 -----------~s~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~ 107 (118)
++++.|+.|++||+++. .....+ .|...+..+.|++
T Consensus 210 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~ 260 (383)
T 3ei3_B 210 AEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNP 260 (383)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECT
T ss_pred EEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcC
Confidence 77889999999999983 333334 6888899988876
No 103
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.51 E-value=2.1e-13 Score=95.09 Aligned_cols=100 Identities=16% Similarity=0.109 Sum_probs=82.6
Q ss_pred cccc-CceEEEEeCCCCCCCCCCce-eeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC--------------
Q psy1285 6 QVAS-LVTCFVWDRRTLNETTAKPV-GVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN-------------- 69 (118)
Q Consensus 6 ~~~~-dg~v~iwd~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-------------- 69 (118)
+++. |+.|++||+.. .... ..+.+|...|.+++|+|++++|++++.|+.|++||+.+..
T Consensus 461 ~~~~~d~~i~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~ 535 (615)
T 1pgu_A 461 VGLEEGNTIQVFKLSD-----LEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKIN 535 (615)
T ss_dssp EEETTTSCEEEEETTE-----EEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEE
T ss_pred EeecCCCeEEEEECCC-----ccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCcee
Confidence 3455 89999999986 3332 5667899999999999999999999999999999986421
Q ss_pred -----------------c---cceecCCcEEEEeCCCC-cceeeecccCcceeeEeeeeecc
Q psy1285 70 -----------------G---AANSKDQTIKLWDVRKF-SNKTAQRNTFRAVCEQNWEYRRE 110 (118)
Q Consensus 70 -----------------~---~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~ 110 (118)
. ++++.|+.|++||+.++ .....+..|...|..+.|++.-.
T Consensus 536 ~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 597 (615)
T 1pgu_A 536 AISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST 597 (615)
T ss_dssp EEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE
T ss_pred EEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC
Confidence 1 56788999999999998 66667778999999999987644
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.51 E-value=1.2e-13 Score=93.30 Aligned_cols=103 Identities=15% Similarity=0.242 Sum_probs=77.4
Q ss_pred ccccCceEEEEeCCCCCC------CCCCceeeecCcc------------CcEEEEEeCCCC--CeEEEeeCCCcEEEEec
Q psy1285 6 QVASLVTCFVWDRRTLNE------TTAKPVGVLAGHR------------DGITFIDPKGDS--RHLISNSKDQTIKLWDV 65 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~------~~~~~~~~~~~h~------------~~v~~~~~~~~~--~~l~s~~~d~~i~~wd~ 65 (118)
+++.||.|+|||+..... ........+.+|. +.|.+++|+|++ ..|++++.|++|++||+
T Consensus 45 ~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~ 124 (447)
T 3dw8_B 45 TGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKI 124 (447)
T ss_dssp EEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEE
T ss_pred EEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEec
Confidence 678899999999986321 0112466788898 889999999988 78999999999999997
Q ss_pred CC----------------------------------------------CCc-----------------cceecCCcEEEE
Q psy1285 66 RK----------------------------------------------FNG-----------------AANSKDQTIKLW 82 (118)
Q Consensus 66 ~~----------------------------------------------~~~-----------------~s~~~d~~i~iw 82 (118)
.. ... ++| .|+.|++|
T Consensus 125 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iw 203 (447)
T 3dw8_B 125 SERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLW 203 (447)
T ss_dssp EEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEE
T ss_pred ccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEE
Confidence 53 111 566 79999999
Q ss_pred eCCCCccee--------eecccCcceeeEeeeeec
Q psy1285 83 DVRKFSNKT--------AQRNTFRAVCEQNWEYRR 109 (118)
Q Consensus 83 d~~~~~~~~--------~~~~~~~~v~~~~~~~~~ 109 (118)
|++...... .+..|...|..+.|++.-
T Consensus 204 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 204 HLEITDRSFNIVDIKPANMEELTEVITAAEFHPNS 238 (447)
T ss_dssp ETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSC
T ss_pred ECCCCCceeeeeecccccccccCcceEEEEECCCC
Confidence 999544332 245788889999998653
No 105
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.50 E-value=1.3e-13 Score=93.09 Aligned_cols=75 Identities=20% Similarity=0.270 Sum_probs=60.8
Q ss_pred cCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC--------------c------------------cceecCCcEE
Q psy1285 33 AGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN--------------G------------------AANSKDQTIK 80 (118)
Q Consensus 33 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--------------~------------------~s~~~d~~i~ 80 (118)
.+|...|.+++|+|++++|+++ .|+.|++||++... . ++|+.|+.|+
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 5799999999999999999998 79999999998210 1 7788999999
Q ss_pred EEeCCCCcc----eeeecccCc------------ceeeEeeeee
Q psy1285 81 LWDVRKFSN----KTAQRNTFR------------AVCEQNWEYR 108 (118)
Q Consensus 81 iwd~~~~~~----~~~~~~~~~------------~v~~~~~~~~ 108 (118)
+||+++... ...+..+.. .+..+.|++.
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHS 296 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTT
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCC
Confidence 999999886 556666654 7888888763
No 106
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.50 E-value=5.5e-14 Score=93.93 Aligned_cols=58 Identities=16% Similarity=0.047 Sum_probs=52.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeee-cCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCC
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVL-AGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKF 68 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 68 (118)
+++.|++|+|||+.. .+++..+ .+|.+.|.+++|+||+++|++++.|++|+|||+...
T Consensus 286 sgs~D~~V~iwd~~~-----~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 286 LASNDNSIALVKLKD-----LSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTSCEEEEETTT-----TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEcCCCEEEEEECCC-----CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 678899999999987 6777764 789999999999999999999999999999999654
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.50 E-value=4.9e-13 Score=86.78 Aligned_cols=104 Identities=12% Similarity=0.090 Sum_probs=82.4
Q ss_pred ccccCceEEEEeCCCCCCC----CCCceeeecCccCcEEEEEeCCC--CCeEEEeeCCCcEEEEecCCCC----------
Q psy1285 6 QVASLVTCFVWDRRTLNET----TAKPVGVLAGHRDGITFIDPKGD--SRHLISNSKDQTIKLWDVRKFN---------- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~~wd~~~~~---------- 69 (118)
+++.||.|++||++..... ...+...+.+|.+.|.+++|+|+ +.++++++.|+.|++||+++..
T Consensus 76 s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 155 (351)
T 3f3f_A 76 SASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE 155 (351)
T ss_dssp EEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE
T ss_pred EEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc
Confidence 6788999999999863210 01446778889999999999998 9999999999999999987543
Q ss_pred --------------------------c---cceecCCcEEEEeCCCCcc--eeeecccCcceeeEeeeeec
Q psy1285 70 --------------------------G---AANSKDQTIKLWDVRKFSN--KTAQRNTFRAVCEQNWEYRR 109 (118)
Q Consensus 70 --------------------------~---~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~ 109 (118)
. ++++.++.+.+|+...... ...+..|...|..+.|++.-
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~ 226 (351)
T 3f3f_A 156 MKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSI 226 (351)
T ss_dssp EESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCS
T ss_pred ccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCC
Confidence 1 6677888998888877765 44556888899999998764
No 108
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.50 E-value=3.1e-13 Score=97.31 Aligned_cols=97 Identities=22% Similarity=0.240 Sum_probs=82.6
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
+++.||.|++||+.. ......+.+|.+.|.+++|+|+++.|++++.|+.|++||+.+...
T Consensus 72 ~~~~dg~i~vw~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 72 VGSDDFRIRVFNYNT-----GEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (814)
T ss_dssp EEETTSEEEEEETTT-----CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEE
T ss_pred EEeCCCeEEEEECCC-----CcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEE
Confidence 567799999999987 677888899999999999999999999999999999999876421
Q ss_pred ----------cceecCCcEEEEeCCCCcceeeecc-cCcceeeEeeee
Q psy1285 71 ----------AANSKDQTIKLWDVRKFSNKTAQRN-TFRAVCEQNWEY 107 (118)
Q Consensus 71 ----------~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~ 107 (118)
++++.|+.|++||++.......+.. +...+..+.|++
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 194 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYP 194 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEE
Confidence 6788899999999998887776663 336788888865
No 109
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.50 E-value=6.3e-13 Score=87.12 Aligned_cols=98 Identities=11% Similarity=0.124 Sum_probs=74.5
Q ss_pred CceEEEEeCCCCCCCCCCceee-ecCccCcEEEEEeCCC---CCeEEEeeCCCcEEEEecCCCC-c--------------
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGV-LAGHRDGITFIDPKGD---SRHLISNSKDQTIKLWDVRKFN-G-------------- 70 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~---~~~l~s~~~d~~i~~wd~~~~~-~-------------- 70 (118)
|+.|++||+.. ...... ..+|.+.|.+++|+|+ +.+|++++.|+.|++||+.+.. .
T Consensus 43 d~~v~iw~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 117 (357)
T 3i2n_A 43 TGVIQLYEIQH-----GDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAI 117 (357)
T ss_dssp CEEEEEEEECS-----SSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEE
T ss_pred CcEEEEEeCCC-----CcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEE
Confidence 89999999986 343322 2368999999999998 6999999999999999998654 2
Q ss_pred ---------------cceecCCcEEEEeCCCCc-ceeeecccCc----ceeeEeeeeecccC
Q psy1285 71 ---------------AANSKDQTIKLWDVRKFS-NKTAQRNTFR----AVCEQNWEYRRENV 112 (118)
Q Consensus 71 ---------------~s~~~d~~i~iwd~~~~~-~~~~~~~~~~----~v~~~~~~~~~~~~ 112 (118)
++++.|+.|++||++... ....+..+.. .+..+.|++.+.+.
T Consensus 118 ~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 118 DGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQE 179 (357)
T ss_dssp EEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-C
T ss_pred eeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCC
Confidence 567889999999999887 4555544333 67777765544443
No 110
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.50 E-value=7.4e-13 Score=89.57 Aligned_cols=59 Identities=22% Similarity=0.267 Sum_probs=42.2
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCC
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKF 68 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 68 (118)
+++.|+.+++||.... ...+..+.+|...+..+.++|+++++++++.|+.+++|+....
T Consensus 204 sgs~d~~i~~~d~~~~----~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 204 SGSRSGHIHHHDVRVA----EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp EEETTSEEEEEETTSS----SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred EEeCCCceeEeeeccc----ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 4556666666666542 3445566778888888888888888888888888888887643
No 111
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.49 E-value=4.2e-13 Score=98.82 Aligned_cols=96 Identities=11% Similarity=0.101 Sum_probs=78.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC----------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN---------------- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~---------------- 69 (118)
+++.|++|++||+.. .+.+..+. |.+.|.+++|+|+++++++|+.||+|++||+++..
T Consensus 74 S~s~D~~v~lWd~~~-----~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~ 147 (902)
T 2oaj_A 74 VINAKDTVYVLSLYS-----QKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFP 147 (902)
T ss_dssp EEETTCEEEEEETTT-----CSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCS
T ss_pred EEECcCeEEEEECCC-----CcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccccccccc
Confidence 678899999999987 56666775 77899999999999999999999999999986431
Q ss_pred -c------------------cceecCCcEEEEeCCCCcceeeeccc------------------CcceeeEeeeee
Q psy1285 70 -G------------------AANSKDQTIKLWDVRKFSNKTAQRNT------------------FRAVCEQNWEYR 108 (118)
Q Consensus 70 -~------------------~s~~~d~~i~iwd~~~~~~~~~~~~~------------------~~~v~~~~~~~~ 108 (118)
. ++|+.|+.| +||+++.+....+..+ ...|..+.|++.
T Consensus 148 ~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd 222 (902)
T 2oaj_A 148 AARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN 222 (902)
T ss_dssp SSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT
T ss_pred ccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC
Confidence 0 677889999 9999998877666544 356777777654
No 112
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.46 E-value=1.6e-12 Score=88.69 Aligned_cols=96 Identities=13% Similarity=0.023 Sum_probs=79.5
Q ss_pred ccccCceEEEEeCC--CCCCCCCCceeeec--CccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC-------c----
Q psy1285 6 QVASLVTCFVWDRR--TLNETTAKPVGVLA--GHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN-------G---- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~--~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-------~---- 70 (118)
+++.||.|+|||+. . ......+. .|...|.+++|+|++++|++++.|+.+.+|++.+.. .
T Consensus 120 ~~~~dg~v~iwd~~~~~-----~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h 194 (450)
T 2vdu_B 120 CADSDKSLLVFDVDKTS-----KNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGH 194 (450)
T ss_dssp EEGGGTEEEEEEECSSS-----SSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEEC
T ss_pred EECCCCeEEEEECcCCC-----CceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecc
Confidence 56679999999998 4 56666665 567889999999999999999999999999875421 0
Q ss_pred -------------------cceecCCcEEEEeCCCCcceee-ecccCcceeeEeee
Q psy1285 71 -------------------AANSKDQTIKLWDVRKFSNKTA-QRNTFRAVCEQNWE 106 (118)
Q Consensus 71 -------------------~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~ 106 (118)
++++.|++|++||+++...... +.+|...|..+.|+
T Consensus 195 ~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s 250 (450)
T 2vdu_B 195 VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG 250 (450)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC
T ss_pred cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC
Confidence 5678899999999999888776 44888889999987
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.45 E-value=8e-13 Score=92.95 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=72.9
Q ss_pred ccccCceEEEEeCCCCCCCCC--Cceeee----cCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC----------
Q psy1285 6 QVASLVTCFVWDRRTLNETTA--KPVGVL----AGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN---------- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~--~~~~~~----~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~---------- 69 (118)
+++.||+|+|||+........ -.+.++ .+|.+.|.+++|+|+| +++++.|++|++||+....
T Consensus 146 sgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~ 223 (588)
T 2j04_A 146 VGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQN 223 (588)
T ss_dssp EEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEEC
T ss_pred EEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecc
Confidence 788899999999986311000 024565 6788899999999999 7888999999999985432
Q ss_pred c---------------cceecCCcEEEEeCCCCcceeeecccCcceeeEee
Q psy1285 70 G---------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNW 105 (118)
Q Consensus 70 ~---------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 105 (118)
. ++++ +++|++||+..........+|...+..+.+
T Consensus 224 ~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~ 273 (588)
T 2j04_A 224 ASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPL 273 (588)
T ss_dssp CCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEE
T ss_pred cccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEe
Confidence 1 4444 799999999987774433378888888877
No 114
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.45 E-value=2.7e-13 Score=90.21 Aligned_cols=58 Identities=16% Similarity=0.126 Sum_probs=52.6
Q ss_pred ccccCce-EEEEeCCCCCCCCCCceeeec-C-ccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCC
Q psy1285 6 QVASLVT-CFVWDRRTLNETTAKPVGVLA-G-HRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKF 68 (118)
Q Consensus 6 ~~~~dg~-v~iwd~~~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 68 (118)
+++.|++ |++||++. .+.+..+. + |.+.|.+++|+|++++|++++.|++|++||++..
T Consensus 212 s~s~d~~~v~iwd~~~-----~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 212 TCSQDGTIIRVFKTED-----GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEETTCSEEEEEETTT-----CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEeCCCCEEEEEECCC-----CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 7889998 99999987 67788887 5 9999999999999999999999999999999653
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1.7e-12 Score=88.47 Aligned_cols=95 Identities=16% Similarity=0.053 Sum_probs=75.7
Q ss_pred ccccCceEEEEeCCCCCCCCCCceee-ecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGV-LAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+++.|++|++||++. ...+.. +.+|.+.|.+++|+ ++++|++++.|++|++||+++...
T Consensus 215 s~~~d~~i~vwd~~~-----~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~ 288 (450)
T 2vdu_B 215 TSDRDEHIKISHYPQ-----CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYL 288 (450)
T ss_dssp EEETTSCEEEEEESC-----TTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGC
T ss_pred EEcCCCcEEEEECCC-----CceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhh
Confidence 577899999999986 556655 55899999999999 999999999999999999876431
Q ss_pred ----------------------------------ccee-cCCcEEEEeC--CCC---cceeeecccCcceeeEeeee
Q psy1285 71 ----------------------------------AANS-KDQTIKLWDV--RKF---SNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 ----------------------------------~s~~-~d~~i~iwd~--~~~---~~~~~~~~~~~~v~~~~~~~ 107 (118)
++++ .|+.|++|++ ... .....+..+ ..+..+.|++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~ 364 (450)
T 2vdu_B 289 NDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN 364 (450)
T ss_dssp CTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET
T ss_pred hhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC
Confidence 4455 7899999999 444 444455555 6788888876
No 116
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.45 E-value=3.1e-13 Score=87.41 Aligned_cols=57 Identities=21% Similarity=0.394 Sum_probs=52.6
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN 69 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~ 69 (118)
+.|+.|+|||++. .+++..+.+|.+.|.+++|+|++++|++++.|++|++||+....
T Consensus 261 ~~d~~i~iwd~~~-----~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 261 FAQNQLVIWKYPT-----MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp TTTCCEEEEETTT-----CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred cCCCEEEEEECCC-----CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 4689999999987 78889999999999999999999999999999999999997654
No 117
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.44 E-value=4.4e-13 Score=100.44 Aligned_cols=98 Identities=18% Similarity=0.174 Sum_probs=86.7
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
.++.||.|++||+.. ......+.+|.+.|.+++|+|+++++++++.|+.|++||+.+...
T Consensus 978 ~g~~~g~i~i~d~~~-----~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~ 1052 (1249)
T 3sfz_A 978 FGDEDGAIKIIELPN-----NRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRL 1052 (1249)
T ss_dssp EEETTSCCEEEETTT-----TSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEE
T ss_pred EEcCCCCEEEEEcCC-----CceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEE
Confidence 456789999999987 677778889999999999999999999999999999999986432
Q ss_pred ------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 ------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.|++|++||+.+++....+..|...+..+.|++.
T Consensus 1053 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d 1096 (1249)
T 3sfz_A 1053 LQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSD 1096 (1249)
T ss_dssp CSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSS
T ss_pred cCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCC
Confidence 67889999999999999998888888888998888764
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.44 E-value=1.3e-12 Score=91.98 Aligned_cols=93 Identities=10% Similarity=0.118 Sum_probs=74.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccC-----cEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC-----------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRD-----GITFIDPKGDSRHLISNSKDQTIKLWDVRKFN----------- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~----------- 69 (118)
+++.||.|++||... .+..+. |.. .+.+++|||+|++|++|+.||+|++||+....
T Consensus 102 s~s~dg~V~iwd~~~-------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~t 173 (588)
T 2j04_A 102 VLSNNGNVSVFKDNK-------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESS 173 (588)
T ss_dssp EEETTSCEEEEETTE-------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEE
T ss_pred EEeCCCcEEEEeCCc-------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeee
Confidence 678899999999542 444455 554 59999999999999999999999999987542
Q ss_pred -----c----------------cceecCCcEEEEeCCCCcce---eee-cccCcceeeEeee
Q psy1285 70 -----G----------------AANSKDQTIKLWDVRKFSNK---TAQ-RNTFRAVCEQNWE 106 (118)
Q Consensus 70 -----~----------------~s~~~d~~i~iwd~~~~~~~---~~~-~~~~~~v~~~~~~ 106 (118)
. ++++.|++|++||+...... ..+ ..|...|..+.|+
T Consensus 174 i~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 174 IRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp EECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred eecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 0 57888999999999887742 345 3677789999997
No 119
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.43 E-value=1.5e-12 Score=90.89 Aligned_cols=94 Identities=17% Similarity=0.207 Sum_probs=81.7
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeee-c---CccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc-----------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVL-A---GHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG----------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~----------- 70 (118)
+++.|+.|++||++. .+.+..+ . +|.+.|.+++|+ ++.++++++.|+.|++||+++...
T Consensus 224 ~~~~dg~i~vwd~~~-----~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 297 (615)
T 1pgu_A 224 TVGSDRKISCFDGKS-----GEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQL 297 (615)
T ss_dssp EEETTCCEEEEETTT-----CCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCG
T ss_pred EEeCCCeEEEEECCC-----CCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcc
Confidence 467899999999987 6777777 5 799999999999 999999999999999999985432
Q ss_pred ---------------cceecCCcEEEEeCCCCcceeeecccCcceeeEee
Q psy1285 71 ---------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNW 105 (118)
Q Consensus 71 ---------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 105 (118)
++++.|+.|++||+++.+....+..|...+..+.|
T Consensus 298 ~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 347 (615)
T 1pgu_A 298 GNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV 347 (615)
T ss_dssp GGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET
T ss_pred cCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe
Confidence 67788999999999998888888888888888877
No 120
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.41 E-value=2.4e-12 Score=85.71 Aligned_cols=103 Identities=10% Similarity=0.068 Sum_probs=79.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCc-----cCcEEEEEeC----CCCCe-EEEeeCCCcEEEEecCC------C-
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGH-----RDGITFIDPK----GDSRH-LISNSKDQTIKLWDVRK------F- 68 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~----~~~~~-l~s~~~d~~i~~wd~~~------~- 68 (118)
+++.||.|++||+.............+..| ...|.+++|+ |++.. |++++.|+.|++||++. .
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 567899999999987211111117778888 5899999999 99999 99999999999999876 1
Q ss_pred --C-----------------c--------------cceecCCcEEEEeCCCCcceeeecc---c---CcceeeEeeeee
Q psy1285 69 --N-----------------G--------------AANSKDQTIKLWDVRKFSNKTAQRN---T---FRAVCEQNWEYR 108 (118)
Q Consensus 69 --~-----------------~--------------~s~~~d~~i~iwd~~~~~~~~~~~~---~---~~~v~~~~~~~~ 108 (118)
. . ++++.|+.|++||+++.+....+.. | ...+..+.|++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~ 244 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 244 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCC
Confidence 1 1 5677899999999999988888877 7 888999999764
No 121
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.39 E-value=1.2e-11 Score=80.73 Aligned_cols=96 Identities=8% Similarity=-0.040 Sum_probs=77.9
Q ss_pred ccccCceEEEEeCCC-CCCCCCCceeeecCccCcEEEEEeCC-CCCeEEEeeCCCcEEEEecCCC------C--------
Q psy1285 6 QVASLVTCFVWDRRT-LNETTAKPVGVLAGHRDGITFIDPKG-DSRHLISNSKDQTIKLWDVRKF------N-------- 69 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~~wd~~~~------~-------- 69 (118)
+++.|+.|++||++. .. .........|...+.+++|+| +++++++++.|+.+++|++... .
T Consensus 165 ~~~~d~~i~i~d~~~~~~---~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 165 VGMNNSQVQWFRLPLCED---DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp EEESTTEEEEEESSCCTT---CCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred EEeCCCeEEEEECCcccc---ccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecc
Confidence 567899999999985 31 122334456888999999999 9999999999999999998654 1
Q ss_pred -----------c-------------cceecCCcEEEEeCCCCcceeeeccc-CcceeeEe
Q psy1285 70 -----------G-------------AANSKDQTIKLWDVRKFSNKTAQRNT-FRAVCEQN 104 (118)
Q Consensus 70 -----------~-------------~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~ 104 (118)
. ++++.|+.|++||+++++....+..| ...|..+.
T Consensus 242 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA 301 (342)
T ss_dssp CCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE
T ss_pred cccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec
Confidence 1 77889999999999999988888877 87777766
No 122
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.38 E-value=3.8e-12 Score=83.11 Aligned_cols=95 Identities=14% Similarity=0.062 Sum_probs=76.3
Q ss_pred ccccCceEEEEeC-CCCCCCCCCceeeecC--ccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCC---------CCc---
Q psy1285 6 QVASLVTCFVWDR-RTLNETTAKPVGVLAG--HRDGITFIDPKGDSRHLISNSKDQTIKLWDVRK---------FNG--- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~-~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~---------~~~--- 70 (118)
+++.||.|++||+ .. . ....+.+ |...|.+++|+| +..+++++.|+.|++||+++ ...
T Consensus 74 ~~~~dg~i~~wd~~~~-----~-~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 146 (342)
T 1yfq_A 74 VGTVQGEILKVDLIGS-----P-SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN 146 (342)
T ss_dssp EEETTSCEEEECSSSS-----S-SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS
T ss_pred EEcCCCeEEEEEeccC-----C-ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeE
Confidence 5677999999999 75 2 3366778 999999999999 99999999999999999876 332
Q ss_pred -----------------cceecCCcEEEEeCCC-Ccce--eeecccCcceeeEeeee
Q psy1285 71 -----------------AANSKDQTIKLWDVRK-FSNK--TAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 -----------------~s~~~d~~i~iwd~~~-~~~~--~~~~~~~~~v~~~~~~~ 107 (118)
++++.|+.|++||++. .... .....+...+..+.|++
T Consensus 147 ~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~ 203 (342)
T 1yfq_A 147 TKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLP 203 (342)
T ss_dssp SSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECS
T ss_pred EeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECC
Confidence 6788899999999998 5542 23335667788888876
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.36 E-value=1.2e-12 Score=87.28 Aligned_cols=56 Identities=21% Similarity=0.318 Sum_probs=47.7
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEE-EEEeCCCCCeEEEeeCCCcEEEEecC
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGIT-FIDPKGDSRHLISNSKDQTIKLWDVR 66 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~d~~i~~wd~~ 66 (118)
+++.|++|||||+.. ++.+.++.+|...+. +++|+|++++|++|+.|++|+|||+.
T Consensus 300 SgS~DgTIkIWDl~t-----Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 300 AILTSGTIAIWDLLL-----GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp EEETTSCEEEEETTT-----CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred EEcCCCcEEEEECCC-----CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 455799999999987 788899998987665 68999999999999999999999963
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.29 E-value=4.5e-11 Score=79.57 Aligned_cols=96 Identities=10% Similarity=0.028 Sum_probs=74.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeE-EEeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHL-ISNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+.+.|+.|++||+.. .+....+..|. .+.+++|+|+++.+ ++++.|+.|++||+.+...
T Consensus 7 s~~~d~~v~v~d~~~-----~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~ 80 (391)
T 1l0q_A 7 ANSESDNISVIDVTS-----NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVA 80 (391)
T ss_dssp EETTTTEEEEEETTT-----TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEE
T ss_pred EcCCCCEEEEEECCC-----CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceE
Confidence 567899999999987 67777777554 58999999999876 6777999999999976433
Q ss_pred ---------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 ---------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ---------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.++.|++||+.+++....+..+ ..+..+.|++.
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~d 126 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPD 126 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTT
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCC
Confidence 34556799999999998877666533 34677777644
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.22 E-value=4.1e-11 Score=80.74 Aligned_cols=96 Identities=9% Similarity=0.015 Sum_probs=73.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCcee-----eecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc----------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVG-----VLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG---------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~---------- 70 (118)
+.+.|+.|++||+.. .+... .+.+|.+.+.+++|+++++.+++++.|+.|++||+.+...
T Consensus 139 ~~~~~~~i~~~d~~~-----g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~ 213 (433)
T 3bws_A 139 PLLEDEGMDVLDINS-----GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKW 213 (433)
T ss_dssp EBTTSSSEEEEETTT-----CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSS
T ss_pred EeCCCCeEEEEECCC-----CeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCC
Confidence 445678999999986 44444 4557888999999999999999999999999999986432
Q ss_pred --------------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeee
Q psy1285 71 --------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 --------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 107 (118)
++++.|+.|++||+++++....+..+ ..+..+.|++
T Consensus 214 ~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~ 263 (433)
T 3bws_A 214 SKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSK 263 (433)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECT
T ss_pred eeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcC
Confidence 34446899999999988876665533 3356666653
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.18 E-value=3.2e-10 Score=75.43 Aligned_cols=96 Identities=10% Similarity=0.018 Sum_probs=72.4
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEE-EeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLI-SNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+.+.|+.|++||+.. .+....+..+. .+.+++|+|+++.++ +++.++.|.+||+.+...
T Consensus 49 ~~~~d~~i~v~d~~~-----~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 122 (391)
T 1l0q_A 49 ANAHSNDVSIIDTAT-----NNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLA 122 (391)
T ss_dssp EEGGGTEEEEEETTT-----TEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEE
T ss_pred ECCCCCeEEEEECCC-----CeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEE
Confidence 345789999999986 66666666444 899999999999875 555679999999986433
Q ss_pred ---------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 ---------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ---------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.++.|++||+++++....+..+. .+..+.|++.
T Consensus 123 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~d 168 (391)
T 1l0q_A 123 LSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPD 168 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCC
Confidence 466678999999999988776665443 3566666543
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.16 E-value=2.2e-10 Score=78.36 Aligned_cols=56 Identities=9% Similarity=-0.056 Sum_probs=49.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecC
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVR 66 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~ 66 (118)
+++.||+|++||++. ........+|...|.+++|+|++++|++|+.|++|++||.+
T Consensus 167 s~s~Dg~v~iwD~~~-----~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 167 VCLADGSIAVLQVTE-----TVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEETTSCEEEEEESS-----SEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEECCCeEEEEEcCC-----CcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 578899999999987 44444556789999999999999999999999999999987
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.15 E-value=5.8e-10 Score=75.70 Aligned_cols=91 Identities=13% Similarity=-0.041 Sum_probs=69.9
Q ss_pred ceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCC---cEEEEecCCCCc-----------------
Q psy1285 11 VTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQ---TIKLWDVRKFNG----------------- 70 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~---~i~~wd~~~~~~----------------- 70 (118)
+.|++||+.. .....+.+|.+.+.+++|+|+|+.|++++.++ .|.+||+.+...
T Consensus 159 ~~i~i~d~~g------~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~sp 232 (415)
T 2hqs_A 159 YELRVSDYDG------YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSP 232 (415)
T ss_dssp EEEEEEETTS------CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECT
T ss_pred ceEEEEcCCC------CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcC
Confidence 7999999974 33456777999999999999999999998875 999999986543
Q ss_pred -----c-ceecCC--cEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 -----A-ANSKDQ--TIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -----~-s~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
+ +++.++ .|.+||+++... ..+..+...+..+.|++.
T Consensus 233 dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spd 277 (415)
T 2hqs_A 233 DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPD 277 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTT
T ss_pred CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCC
Confidence 2 444444 499999988765 455566667777777653
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.15 E-value=4.7e-10 Score=75.56 Aligned_cols=97 Identities=8% Similarity=-0.098 Sum_probs=73.5
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEE-EeeCCCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLI-SNSKDQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~~wd~~~~~~-------------- 70 (118)
+++.|+.|++||++. .+....+..|...+.+++|+|+++.++ +++.|+.|.+||+++...
T Consensus 186 s~~~d~~v~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 260 (433)
T 3bws_A 186 SQMQANAVHVFDLKT-----LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLL 260 (433)
T ss_dssp EEGGGTEEEEEETTT-----CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEE
T ss_pred EECCCCEEEEEECCC-----ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEE
Confidence 566789999999986 677777888899999999999998875 555899999999976432
Q ss_pred --------ccee--------cCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 --------AANS--------KDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 --------~s~~--------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++ .|+.|++||+++++....+ .+...+..+.|++.
T Consensus 261 ~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~ 313 (433)
T 3bws_A 261 LSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNT 313 (433)
T ss_dssp ECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSS
T ss_pred EcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCC
Confidence 3344 3789999999988765544 23345666666543
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.81 E-value=7.6e-08 Score=60.98 Aligned_cols=55 Identities=15% Similarity=0.033 Sum_probs=45.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCC
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 67 (118)
..+.|++|++||+.. .+.. .+..|.+.+.+++|+|++++|++++ ++.|.+||+.+
T Consensus 17 ~~~~~~~i~~~d~~~-----~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~ 71 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRT-----RKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAG 71 (297)
T ss_dssp -CCCCEEEEEEETTT-----TEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSS
T ss_pred CCCcceeEEEEeCCC-----Ccee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCC
Confidence 456789999999986 4433 4455889999999999999999876 78999999987
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.80 E-value=1.3e-07 Score=66.40 Aligned_cols=83 Identities=14% Similarity=0.130 Sum_probs=65.3
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEec--CCCCc-------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDV--RKFNG------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~--~~~~~------------- 70 (118)
+.+.|++|++||..+ .+.+.++..+.. +.+++|+|++++|++++.|++|.+||+ .+...
T Consensus 154 s~~~d~~V~v~D~~t-----~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~v 227 (543)
T 1nir_A 154 TLRDAGQIALVDGDS-----KKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSV 227 (543)
T ss_dssp EEGGGTEEEEEETTT-----CCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEE
T ss_pred EEcCCCeEEEEECCC-----ceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceE
Confidence 456689999999987 677777773333 889999999999999999999999999 54321
Q ss_pred -------------ccee-cCCcEEEEeCCCCcceeeec
Q psy1285 71 -------------AANS-KDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 -------------~s~~-~d~~i~iwd~~~~~~~~~~~ 94 (118)
++++ .+++|.+||..+.+....+.
T Consensus 228 a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred EeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec
Confidence 2333 47899999999888776654
No 132
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.77 E-value=1e-07 Score=68.08 Aligned_cols=79 Identities=9% Similarity=-0.037 Sum_probs=59.5
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccC---cEEEEEeCCCCCeEEEeeCC---------CcEEEEecCCCCc-----
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRD---GITFIDPKGDSRHLISNSKD---------QTIKLWDVRKFNG----- 70 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~d---------~~i~~wd~~~~~~----- 70 (118)
+.||+|++||+.+ ++....+..|.. .+.+++|||||+.|++++.+ +.+.+||+.+...
T Consensus 34 ~~dg~i~~~d~~~-----g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 108 (723)
T 1xfd_A 34 EQKGTVRLWNVET-----NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDP 108 (723)
T ss_dssp CSSSCEEEBCGGG-----CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCC
T ss_pred eCCCCEEEEECCC-----CcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccC
Confidence 5789999999987 555566666654 48999999999999988764 6788999875431
Q ss_pred --------------------cceecCCcEEEEeCCCCcceee
Q psy1285 71 --------------------AANSKDQTIKLWDVRKFSNKTA 92 (118)
Q Consensus 71 --------------------~s~~~d~~i~iwd~~~~~~~~~ 92 (118)
+.++ ++.|.+||+.++.....
T Consensus 109 ~~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 109 PEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRV 149 (723)
T ss_dssp TTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEE
T ss_pred CccccccccccEECCCCCEEEEEE-CCeEEEEECCCCceEEE
Confidence 2333 47899999988766543
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.70 E-value=1.9e-07 Score=63.33 Aligned_cols=93 Identities=13% Similarity=0.008 Sum_probs=68.7
Q ss_pred eEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCC---CcEEEEecCCCCc------------------
Q psy1285 12 TCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKD---QTIKLWDVRKFNG------------------ 70 (118)
Q Consensus 12 ~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~~wd~~~~~~------------------ 70 (118)
.|.+||+.. .+ ...+..+...+.+++|+|+|++|+.++.+ ..|.+||+.+...
T Consensus 292 ~i~~~d~~~-----~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg 365 (415)
T 2hqs_A 292 QVYKVNING-----GA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNG 365 (415)
T ss_dssp EEEEEETTS-----SC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTS
T ss_pred EEEEEECCC-----CC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCC
Confidence 677778765 33 23345567788999999999999887764 5899999876432
Q ss_pred ---cceecCC---cEEEEeCCCCcceeeecccCcceeeEeeeeeccc
Q psy1285 71 ---AANSKDQ---TIKLWDVRKFSNKTAQRNTFRAVCEQNWEYRREN 111 (118)
Q Consensus 71 ---~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 111 (118)
++++.++ .|.+||+. +.....+..+...|..+.|++....
T Consensus 366 ~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 366 TMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLHH 411 (415)
T ss_dssp SEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCCC
T ss_pred CEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccccc
Confidence 4455555 79999987 4456677788889999999987654
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.65 E-value=1e-06 Score=57.23 Aligned_cols=96 Identities=8% Similarity=-0.064 Sum_probs=67.0
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeC-CCcEEEEecCCCCc--------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSK-DQTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~~i~~wd~~~~~~-------------- 70 (118)
+.+.++.|++||+.. .+....+..+...+ +++|+|+++.+++++. ++.|.+||..+...
T Consensus 15 ~~~~~~~v~~~d~~~-----~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (331)
T 3u4y_A 15 VEQHLRRISFFSTDT-----LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMAD 88 (331)
T ss_dssp EEGGGTEEEEEETTT-----CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCC
T ss_pred EecCCCeEEEEeCcc-----cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccc
Confidence 567789999999987 56666666555666 9999999997665555 88999999976541
Q ss_pred ----------cceecC-C--cEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 ----------AANSKD-Q--TIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ----------~s~~~d-~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
+++..+ + .|.+||+.+++....+... .....+.|++.
T Consensus 89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spd 138 (331)
T 3u4y_A 89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPN 138 (331)
T ss_dssp EEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTT
T ss_pred eEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCC
Confidence 322223 2 8999999988876655432 23456666543
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.60 E-value=3.1e-07 Score=58.15 Aligned_cols=99 Identities=16% Similarity=0.073 Sum_probs=68.1
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEee-CCCcEEEEecCC-CCc-------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNS-KDQTIKLWDVRK-FNG------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~~wd~~~-~~~------------- 70 (118)
+++.|+.++||+++.. ......+..+...+.+++|+|+++.++.++ .++.+.+|++.. ...
T Consensus 146 ~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 221 (297)
T 2ojh_A 146 CGIRDQVFDIYSMDID----SGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWF 221 (297)
T ss_dssp EEEETTEEEEEEEETT----TCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEE
T ss_pred EECCCCceEEEEEECC----CCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCC
Confidence 4456788999997541 233455666888899999999999887665 588999998752 111
Q ss_pred ----------cceecC-----------CcEEEEeCCCCccee--eecccCcceeeEeeeee
Q psy1285 71 ----------AANSKD-----------QTIKLWDVRKFSNKT--AQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 ----------~s~~~d-----------~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~ 108 (118)
+.++.+ ..|.+||+.+.+... .+..+...+..+.|++.
T Consensus 222 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 282 (297)
T 2ojh_A 222 PHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPD 282 (297)
T ss_dssp EEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTT
T ss_pred eEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCC
Confidence 334433 569999998876533 33356667777777643
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.57 E-value=5.6e-07 Score=63.25 Aligned_cols=96 Identities=7% Similarity=0.022 Sum_probs=64.6
Q ss_pred cccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEe-eCCCcEEEEecCCCCc---------------
Q psy1285 7 VASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISN-SKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 7 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~d~~i~~wd~~~~~~--------------- 70 (118)
...+++|.+||+.... ...+..+. +...+.++.|+|++++++++ ..+++|.+||..+...
T Consensus 298 ~~~~g~i~vvd~~~~~---~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g 373 (543)
T 1nir_A 298 VKETGKVLLVNYKDID---NLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRG 373 (543)
T ss_dssp ETTTTEEEEEECTTSS---SCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTC
T ss_pred ECCCCeEEEEEecCCC---cceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCC
Confidence 3457899999997621 11122333 56678889999999977654 5689999999876432
Q ss_pred ------------ccee-cCCcEEEEeCCC-------CcceeeecccCcceeeEeee
Q psy1285 71 ------------AANS-KDQTIKLWDVRK-------FSNKTAQRNTFRAVCEQNWE 106 (118)
Q Consensus 71 ------------~s~~-~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~~ 106 (118)
+++. .|++|.+||+.+ .+....+..+...+..+.++
T Consensus 374 ~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~ 429 (543)
T 1nir_A 374 ANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTH 429 (543)
T ss_dssp EEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECC
T ss_pred cccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcC
Confidence 3333 478999999988 66666666665444444443
No 137
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.56 E-value=1.2e-06 Score=65.59 Aligned_cols=91 Identities=12% Similarity=0.080 Sum_probs=65.7
Q ss_pred CceEE-EEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc------------------
Q psy1285 10 LVTCF-VWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------------ 70 (118)
Q Consensus 10 dg~v~-iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------------ 70 (118)
++.+. +||+.. ... ..+.+|...+..++|+|+|+.|++++.++.+.+||+.+...
T Consensus 357 ~~~l~~~~d~~~-----~~~-~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp 430 (1045)
T 1k32_A 357 EGDFLGIYDYRT-----GKA-EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD 430 (1045)
T ss_dssp TEEEEEEEETTT-----CCE-EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT
T ss_pred CCceEEEEECCC-----CCc-eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECC
Confidence 45677 778865 332 33447888899999999999999999999999999976432
Q ss_pred -----cceecC----------CcEEEEeCCCCcceeeecccCcceeeEeeee
Q psy1285 71 -----AANSKD----------QTIKLWDVRKFSNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 -----~s~~~d----------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 107 (118)
++++.+ +.|.+||+.+++ ...+..+...+..+.|++
T Consensus 431 DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~sp 481 (1045)
T 1k32_A 431 NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDA 481 (1045)
T ss_dssp TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECT
T ss_pred CCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcC
Confidence 334333 489999999876 555555655566666653
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.53 E-value=3.1e-07 Score=59.59 Aligned_cols=75 Identities=9% Similarity=0.053 Sum_probs=53.8
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCC-CcEEEEecC--CCCc--------------
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKD-QTIKLWDVR--KFNG-------------- 70 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-~~i~~wd~~--~~~~-------------- 70 (118)
+.|+.|++||+... ........+ .+...+.+++|+|++++|++++.+ +.|.+|++. +...
T Consensus 12 ~~~~~v~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (343)
T 1ri6_A 12 PESQQIHVWNLNHE--GALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTH 88 (343)
T ss_dssp GGGTEEEEEEECTT--SCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSE
T ss_pred CCCCeEEEEEECCC--CcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcE
Confidence 66899999999631 012333333 367788999999999988888776 899999987 3221
Q ss_pred ----------ccee-cCCcEEEEeCC
Q psy1285 71 ----------AANS-KDQTIKLWDVR 85 (118)
Q Consensus 71 ----------~s~~-~d~~i~iwd~~ 85 (118)
++++ .++.|.+||+.
T Consensus 89 ~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 89 ISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEcCCCCEEEEEecCCCeEEEEECC
Confidence 2333 47889999994
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.52 E-value=2.3e-06 Score=55.79 Aligned_cols=95 Identities=8% Similarity=-0.015 Sum_probs=67.0
Q ss_pred cccCceEEEEeCCCCCCCCCCceeeecC----ccCcEEEEEeCCCCCeEEEee-CCCcEEEEecCCCCc-----------
Q psy1285 7 VASLVTCFVWDRRTLNETTAKPVGVLAG----HRDGITFIDPKGDSRHLISNS-KDQTIKLWDVRKFNG----------- 70 (118)
Q Consensus 7 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~-~d~~i~~wd~~~~~~----------- 70 (118)
+..++.+.+||... .+....+.. +...+..++|+|+++.+..++ .++.|.+||..+...
T Consensus 202 ~~~~~~i~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 276 (353)
T 3vgz_A 202 TNADGELITIDTAD-----NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLA 276 (353)
T ss_dssp ECTTSEEEEEETTT-----TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC
T ss_pred EcCCCeEEEEECCC-----CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCce
Confidence 34578999999986 455544432 455678899999999776555 458999999976543
Q ss_pred -----------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeee
Q psy1285 71 -----------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 -----------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 107 (118)
++...++.|.+||..+++....+... ..+..+.|++
T Consensus 277 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~ 323 (353)
T 3vgz_A 277 VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSA 323 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECT
T ss_pred EEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcC
Confidence 33446889999999998877666533 2455666653
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.52 E-value=3.4e-06 Score=55.00 Aligned_cols=95 Identities=9% Similarity=-0.011 Sum_probs=66.2
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccC---------cEEEEEeCCCCCeEEEee--CCCcEEEEecCCCCc------
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRD---------GITFIDPKGDSRHLISNS--KDQTIKLWDVRKFNG------ 70 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~l~s~~--~d~~i~~wd~~~~~~------ 70 (118)
..++.|.+||... .+....+..+.. .+.++.|+|+++.++.++ .++.|.+||..+...
T Consensus 108 ~~~~~v~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~ 182 (353)
T 3vgz_A 108 TVNSAVTAIDAKT-----GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN 182 (353)
T ss_dssp TTTTEEEEEETTT-----CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECC
T ss_pred cCCCEEEEEeCCC-----CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecC
Confidence 4568999999986 555555554332 268899999999777665 478899999875432
Q ss_pred -----------------cceecCCcEEEEeCCCCcceeeecc----cCcceeeEeeee
Q psy1285 71 -----------------AANSKDQTIKLWDVRKFSNKTAQRN----TFRAVCEQNWEY 107 (118)
Q Consensus 71 -----------------~s~~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~ 107 (118)
+.++.++.|.+||..+++....+.. +...+..+.|++
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 240 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT 240 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET
T ss_pred CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC
Confidence 4456688999999999887765542 233344556654
No 141
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.49 E-value=4.4e-07 Score=64.98 Aligned_cols=78 Identities=12% Similarity=0.029 Sum_probs=57.9
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccC---cEEEEEeCCCCCeEEEeeC---------CCcEEEEecCCCCc-----
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRD---GITFIDPKGDSRHLISNSK---------DQTIKLWDVRKFNG----- 70 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~---------d~~i~~wd~~~~~~----- 70 (118)
+.|+.|++||+.. ++....+..|.. .+.+++|||||+.|+.++. ++.+.+||+.+...
T Consensus 33 ~~d~~i~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~ 107 (719)
T 1z68_A 33 SADNNIVLYNIET-----GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE 107 (719)
T ss_dssp CTTSCEEEEESSS-----CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred cCCCCEEEEEcCC-----CcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee
Confidence 3589999999987 555555554433 3889999999999998876 78999999864321
Q ss_pred ----------------cceecCCcEEEEeCCCCcce
Q psy1285 71 ----------------AANSKDQTIKLWDVRKFSNK 90 (118)
Q Consensus 71 ----------------~s~~~d~~i~iwd~~~~~~~ 90 (118)
+....++.|++||+.++...
T Consensus 108 l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 108 LPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPF 143 (719)
T ss_dssp CCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCE
T ss_pred cCcccccceECCCCCEEEEEECCeEEEEeCCCCCcE
Confidence 22235789999999877654
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.48 E-value=1.2e-06 Score=62.82 Aligned_cols=74 Identities=11% Similarity=0.101 Sum_probs=53.7
Q ss_pred eEEEEeCCCCCCCCCCceeeecCccC------------------------cEEEEEeCCCCCeEEEeeCCCcEEEEecCC
Q psy1285 12 TCFVWDRRTLNETTAKPVGVLAGHRD------------------------GITFIDPKGDSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 12 ~v~iwd~~~~~~~~~~~~~~~~~h~~------------------------~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 67 (118)
.|++||+.. ++....+..+.. .+.+++|+|||+.|++++. +.|.+||+.+
T Consensus 65 ~i~~~d~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~ 138 (741)
T 2ecf_A 65 DLWSYDIGS-----GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQ 138 (741)
T ss_dssp EEEEEETTT-----CCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSS
T ss_pred EEEEEECCC-----CceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCC
Confidence 899999986 444444443322 3788999999999998876 8999999987
Q ss_pred C---Cc---------------------cceecCCcEEEEeCCCCccee
Q psy1285 68 F---NG---------------------AANSKDQTIKLWDVRKFSNKT 91 (118)
Q Consensus 68 ~---~~---------------------~s~~~d~~i~iwd~~~~~~~~ 91 (118)
. .. +....++.|.+||+.++....
T Consensus 139 ~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 139 EGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQ 186 (741)
T ss_dssp CSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEE
T ss_pred CCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEE
Confidence 6 32 222335689999998876543
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.43 E-value=2.6e-06 Score=55.06 Aligned_cols=96 Identities=15% Similarity=0.081 Sum_probs=64.7
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecC-ccC-cEEEEEeCCCCCeE-EEeeCCCcEEEEecCCCCc------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAG-HRD-GITFIDPKGDSRHL-ISNSKDQTIKLWDVRKFNG------------ 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-h~~-~v~~~~~~~~~~~l-~s~~~d~~i~~wd~~~~~~------------ 70 (118)
+.+.++.|++||+.. .+....+.. +.. .+..++|+|+++.+ +++..++.|.+||+.+...
T Consensus 6 ~~~~~~~v~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 6 APARPDKLVVIDTEK-----MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEETTTEEEEEETTT-----TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred EcCCCCeEEEEECCC-----CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 567799999999986 566665552 211 47889999999765 4566678999999864221
Q ss_pred ----------------ccee------------cCCcEEEEeCCCCcceeeecccCcceeeEeeee
Q psy1285 71 ----------------AANS------------KDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 71 ----------------~s~~------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 107 (118)
++++ .++.|.+||+.+.+....+.. ...+..+.|++
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~ 144 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWAR 144 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECT
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECC
Confidence 2232 368999999988776655542 22344555543
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.35 E-value=5.4e-06 Score=53.58 Aligned_cols=76 Identities=8% Similarity=-0.021 Sum_probs=58.4
Q ss_pred eEEEEeCCCCCCCCCCc-eeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc--------------------
Q psy1285 12 TCFVWDRRTLNETTAKP-VGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG-------------------- 70 (118)
Q Consensus 12 ~v~iwd~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-------------------- 70 (118)
.|.+||+.. .+. ...+..+...+.+++|+|+++.++++ ++.|.+||+.+...
T Consensus 220 ~v~~~d~~~-----~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 292 (337)
T 1pby_B 220 GLLTMDLET-----GEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGS 292 (337)
T ss_dssp EEEEEETTT-----CCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSC
T ss_pred ceEEEeCCC-----CCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCC
Confidence 578999986 332 33344566778899999999998887 78999999876432
Q ss_pred --cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 --AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 --~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
++++.++.|.+||+.+++....+.
T Consensus 293 ~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 293 TVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp EEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred EEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 445678999999999998877665
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.34 E-value=8.9e-06 Score=52.75 Aligned_cols=75 Identities=8% Similarity=0.088 Sum_probs=54.0
Q ss_pred cCceEEEEeCCCCCCCCCCc-eeeecCccCcEEEEEeCCCCCeEEEeeCCC---cEEEEecCCCCc--------------
Q psy1285 9 SLVTCFVWDRRTLNETTAKP-VGVLAGHRDGITFIDPKGDSRHLISNSKDQ---TIKLWDVRKFNG-------------- 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~---~i~~wd~~~~~~-------------- 70 (118)
.++.|.+||+.. ... ...+..+.....+++|+|+++++++...++ .|.+||+.+...
T Consensus 60 ~~~~i~~~d~~~-----~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~ 134 (331)
T 3u4y_A 60 FCQTLVQIETQL-----EPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIA 134 (331)
T ss_dssp TTCEEEEEECSS-----SSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEE
T ss_pred CCCeEEEEECCC-----CceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceE
Confidence 377999999986 454 556665666655599999999988655553 899999976432
Q ss_pred ---------cceecCCc-EEEEeCCCCc
Q psy1285 71 ---------AANSKDQT-IKLWDVRKFS 88 (118)
Q Consensus 71 ---------~s~~~d~~-i~iwd~~~~~ 88 (118)
++...++. |.+|++....
T Consensus 135 ~spdg~~l~~~~~~~~~~i~~~~~~~~g 162 (331)
T 3u4y_A 135 ISPNGNGLILIDRSSANTVRRFKIDADG 162 (331)
T ss_dssp ECTTSSCEEEEEETTTTEEEEEEECTTC
T ss_pred ECCCCCEEEEEecCCCceEEEEEECCCC
Confidence 33445577 9999987543
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.33 E-value=1e-05 Score=56.77 Aligned_cols=68 Identities=7% Similarity=-0.003 Sum_probs=54.3
Q ss_pred ceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCC--cEEEEecCCCCc------------------
Q psy1285 11 VTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQ--TIKLWDVRKFNG------------------ 70 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~--~i~~wd~~~~~~------------------ 70 (118)
+.|++||+.. ++. ..+..|.+.+..++|+|||+.|+++..++ .|.+||+.+...
T Consensus 175 ~~i~~~d~~~-----g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 175 VSLFTSNLSS-----GGL-RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAI 248 (582)
T ss_dssp EEEEEEETTT-----CCC-EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEE
T ss_pred eEEEEEcCCC-----CCc-eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccc
Confidence 7799999876 333 35677888899999999999999888888 899999765321
Q ss_pred ------------cceecCCcEEEEeC
Q psy1285 71 ------------AANSKDQTIKLWDV 84 (118)
Q Consensus 71 ------------~s~~~d~~i~iwd~ 84 (118)
++++.++++++|++
T Consensus 249 ~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEEET
T ss_pred cceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 34567889999999
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.33 E-value=3.6e-06 Score=54.50 Aligned_cols=75 Identities=11% Similarity=0.077 Sum_probs=50.8
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEee-CCCcEEEEecC---CCCc---------------
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNS-KDQTIKLWDVR---KFNG--------------- 70 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~~wd~~---~~~~--------------- 70 (118)
++.|++|++.... .....+..+..+ +.+..++|+|+++.+++++ .++.|.+||+. ....
T Consensus 59 ~~~v~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 136 (343)
T 1ri6_A 59 EFRVLAYRIAPDD-GALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANI 136 (343)
T ss_dssp TTEEEEEEECTTT-CCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEE
T ss_pred CCeEEEEEecCCC-CceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEE
Confidence 3899999997210 012233444433 3788999999999876665 48899999993 1110
Q ss_pred -------ccee-cCCcEEEEeCCC
Q psy1285 71 -------AANS-KDQTIKLWDVRK 86 (118)
Q Consensus 71 -------~s~~-~d~~i~iwd~~~ 86 (118)
++++ .++.|.+||+.+
T Consensus 137 s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 137 SPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCCCCEEEEecCCCCEEEEEEecC
Confidence 3344 789999999987
No 148
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.29 E-value=1.4e-05 Score=54.16 Aligned_cols=93 Identities=10% Similarity=0.026 Sum_probs=67.9
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc-----------------
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG----------------- 70 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~----------------- 70 (118)
+.++.|++||++.. ........|...+.++.+.+. .++++..||.+.+||+.+...
T Consensus 103 ~~~~~l~v~dv~sl-----~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~~~~Vs~v~WSpkG~ 175 (388)
T 1xip_A 103 STRNALYSLDLEEL-----SEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQL 175 (388)
T ss_dssp EESSEEEEEESSST-----TCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEE
T ss_pred EcCCcEEEEEchhh-----hccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccccccCCceEEEEcCCce
Confidence 37799999999873 333344556777888887643 388899999999999986542
Q ss_pred cceecCCcEEEEeCCCCcc--eeee------c---ccCcceeeEeeee
Q psy1285 71 AANSKDQTIKLWDVRKFSN--KTAQ------R---NTFRAVCEQNWEY 107 (118)
Q Consensus 71 ~s~~~d~~i~iwd~~~~~~--~~~~------~---~~~~~v~~~~~~~ 107 (118)
+.|..|+++++|+...... ...+ . .+...|..+.|..
T Consensus 176 ~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~ 223 (388)
T 1xip_A 176 AVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS 223 (388)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESS
T ss_pred EEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEec
Confidence 6678899999999887764 3333 1 2556788888863
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.28 E-value=4.6e-06 Score=54.22 Aligned_cols=57 Identities=14% Similarity=-0.086 Sum_probs=42.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCcc-CcEEEEEeCCCCCeE-EEeeCCCcEEEEecCC
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHR-DGITFIDPKGDSRHL-ISNSKDQTIKLWDVRK 67 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l-~s~~~d~~i~~wd~~~ 67 (118)
+.+.+++|++||... .+....+..+. ..+..++|+|+++.+ ++...++.|.+||+.+
T Consensus 16 ~~~~~~~v~~~d~~~-----~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t 74 (349)
T 1jmx_B 16 VTNYPNNLHVVDVAS-----DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT 74 (349)
T ss_dssp EEETTTEEEEEETTT-----TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EeCCCCeEEEEECCC-----CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC
Confidence 567789999999986 56666665332 257789999999865 4556789999999864
No 150
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.27 E-value=4.4e-06 Score=56.65 Aligned_cols=94 Identities=14% Similarity=0.080 Sum_probs=65.9
Q ss_pred cccCceEEEEeCCCCC------CCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc----------
Q psy1285 7 VASLVTCFVWDRRTLN------ETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG---------- 70 (118)
Q Consensus 7 ~~~dg~v~iwd~~~~~------~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~---------- 70 (118)
++....+++|++.... ....++.... .+.. |..++| ++..|+++ .++.|++||+++...
T Consensus 54 a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~ 128 (388)
T 1xip_A 54 AASGSKAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKP 128 (388)
T ss_dssp EEETTEEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSC
T ss_pred EeCCCEEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecc
Confidence 3444577779876421 0001222222 3666 999999 89999988 889999999876533
Q ss_pred -----------cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeeec
Q psy1285 71 -----------AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYRR 109 (118)
Q Consensus 71 -----------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 109 (118)
+.+..||.|.+||++...... +...|+++.|+++-
T Consensus 129 v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG 174 (388)
T 1xip_A 129 VFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ 174 (388)
T ss_dssp EEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE
T ss_pred eeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc
Confidence 556789999999999777542 34578999998765
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.21 E-value=6.4e-06 Score=58.86 Aligned_cols=53 Identities=9% Similarity=-0.022 Sum_probs=41.8
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCC
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 67 (118)
+.++.+++||+.. .+.. .+..+...+.+++|+|+|+.|+.. .|+.|.+||+.+
T Consensus 98 ~~~~~i~~~d~~~-----~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~ 150 (706)
T 2z3z_A 98 FTQGGLVGFDMLA-----RKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGK 150 (706)
T ss_dssp EETTEEEEEETTT-----TEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBC
T ss_pred EECCEEEEEECCC-----CceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCc
Confidence 4568999999976 3333 344567778899999999999885 689999999865
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.20 E-value=2.8e-05 Score=55.79 Aligned_cols=52 Identities=10% Similarity=-0.006 Sum_probs=41.0
Q ss_pred CceEEEEeCCCCCCCCCC--ceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCC
Q psy1285 10 LVTCFVWDRRTLNETTAK--PVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 67 (118)
++.|++||+.. .. ....+..|...+.+++|+|||+.|+.++ ++.|.+||+.+
T Consensus 128 ~~~i~~~d~~~-----~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~ 181 (741)
T 2ecf_A 128 GGELYLYDLKQ-----EGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLAS 181 (741)
T ss_dssp TTEEEEEESSS-----CSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTT
T ss_pred CCcEEEEECCC-----CCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCC
Confidence 37899999986 31 3344566788899999999999999886 56899999864
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.18 E-value=1.8e-06 Score=60.57 Aligned_cols=87 Identities=7% Similarity=-0.167 Sum_probs=58.8
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCC----CcEEEEecCCCCc--------------
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKD----QTIKLWDVRKFNG-------------- 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----~~i~~wd~~~~~~-------------- 70 (118)
.++.+.+||+.. ++... +..+.. .+++|+|||+.+++++.+ +.|.+||+.+...
T Consensus 130 ~~~~~~l~d~~~-----g~~~~-l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~ 201 (582)
T 3o4h_A 130 TEDRVALYALDG-----GGLRE-LARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSAS 201 (582)
T ss_dssp CSSCEEEEEEET-----TEEEE-EEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEE
T ss_pred CCCCceEEEccC-----CcEEE-eecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccce
Confidence 344555999875 34333 332333 789999999999988776 7899999875433
Q ss_pred --------cceecCC--cEEEEeCCCCcceeeecccCcceeeEe
Q psy1285 71 --------AANSKDQ--TIKLWDVRKFSNKTAQRNTFRAVCEQN 104 (118)
Q Consensus 71 --------~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~ 104 (118)
+++..++ .|.+||+.+++.. .+..+...+..+.
T Consensus 202 ~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 202 ISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYR 244 (582)
T ss_dssp ECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHC
T ss_pred ECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhh
Confidence 4445567 8999999887766 4445554454444
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.12 E-value=2.6e-05 Score=51.33 Aligned_cols=95 Identities=7% Similarity=0.013 Sum_probs=57.1
Q ss_pred cCceEEEEeCCCCCCCCCCceeee---cCccCcEEEEEeCCCCCeEEEeeC--CCcEEEEecC--CCCc-----------
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVL---AGHRDGITFIDPKGDSRHLISNSK--DQTIKLWDVR--KFNG----------- 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~--d~~i~~wd~~--~~~~----------- 70 (118)
.++.|.+|++..+. ......+ ..+......++|+|++++|+++.. ++.|.+|++. +...
T Consensus 231 ~~~~v~v~~~~~g~---~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~ 307 (361)
T 3scy_A 231 IGGTVIAFRYADGM---LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIH 307 (361)
T ss_dssp TTCEEEEEEEETTE---EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSC
T ss_pred CCCeEEEEEecCCc---eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCC
Confidence 47899999987521 1222222 223345689999999998866554 5899999985 2111
Q ss_pred -------------ccee-cCCcEEEEeC--CCCcceeee-cccCcceeeEeee
Q psy1285 71 -------------AANS-KDQTIKLWDV--RKFSNKTAQ-RNTFRAVCEQNWE 106 (118)
Q Consensus 71 -------------~s~~-~d~~i~iwd~--~~~~~~~~~-~~~~~~v~~~~~~ 106 (118)
++++ .++.|.+|++ .+++..... ..+...+.++.|.
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 308 PRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 3333 5688999644 455443322 1233456666663
No 155
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.08 E-value=1.7e-05 Score=56.69 Aligned_cols=52 Identities=8% Similarity=-0.056 Sum_probs=37.2
Q ss_pred CceEEEEeCCCCCCCCCCc--eeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCC
Q psy1285 10 LVTCFVWDRRTLNETTAKP--VGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 67 (118)
++.+.+||+.. ++. +....+|...+..++|+|||+.|+.++. +.|.+||+.+
T Consensus 90 ~~~i~~~d~~~-----~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~ 143 (723)
T 1xfd_A 90 TGYYVLSKIPH-----GDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG 143 (723)
T ss_dssp CSEEEEEESSS-----CCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS
T ss_pred eeeEEEEECCC-----CceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC
Confidence 47899999986 332 2222345555888999999999988775 6888888753
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.05 E-value=2.4e-05 Score=51.80 Aligned_cols=53 Identities=13% Similarity=0.085 Sum_probs=40.1
Q ss_pred eEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC
Q psy1285 12 TCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN 69 (118)
Q Consensus 12 ~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~ 69 (118)
.|.+||+.. ++......++...+..+.|+|+++.|+..+.++.+.+||+.+..
T Consensus 61 ~l~~~d~~~-----g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 61 NYYLLDLNT-----QVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp EEEEEETTT-----CEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred eEEEEeCCC-----CceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 477778765 45554445555555567899999999999999999999998754
No 157
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.04 E-value=3.3e-05 Score=57.84 Aligned_cols=92 Identities=10% Similarity=0.028 Sum_probs=69.0
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccC-cEEEEEeCCCCCeEEEeeCCCcEE-EEecCCCCc-----------------
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRD-GITFIDPKGDSRHLISNSKDQTIK-LWDVRKFNG----------------- 70 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~d~~i~-~wd~~~~~~----------------- 70 (118)
++.+.+|+... .. ...+..|.+ .+..+.|+ +++.++.++.+..+. +||+.....
T Consensus 316 ~~~i~~~~~~~-----~~-~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~Sp 388 (1045)
T 1k32_A 316 RGQAFIQDVSG-----TY-VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDR 388 (1045)
T ss_dssp TTEEEEECTTS-----SB-EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECT
T ss_pred cCEEEEEcCCC-----Cc-eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECC
Confidence 67889998875 33 233566777 89999999 999999988887888 888764321
Q ss_pred -----cceecCCcEEEEeCCCCcceeeecccCcceeeEeeeee
Q psy1285 71 -----AANSKDQTIKLWDVRKFSNKTAQRNTFRAVCEQNWEYR 108 (118)
Q Consensus 71 -----~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 108 (118)
++++.++.|++||+.+++.......+...+..+.|++.
T Consensus 389 DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 389 NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDN 431 (1045)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTT
T ss_pred CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCC
Confidence 66778889999999988776555567666777777643
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.03 E-value=5.3e-05 Score=49.54 Aligned_cols=54 Identities=9% Similarity=0.117 Sum_probs=41.5
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEee-CCCcEEEEecC
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNS-KDQTIKLWDVR 66 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~~wd~~ 66 (118)
++.|++||+..+ ....+..+..+...+..++|+|++++|++++ .++.+.+|++.
T Consensus 62 ~~~v~~~~~~~g---~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 62 EGGIAAWQIDGQ---TAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp EEEEEEEEEETT---EEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CceEEEEEecCC---cEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence 689999999641 1224444455677888999999999888777 67899999985
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.01 E-value=8.5e-05 Score=48.86 Aligned_cols=56 Identities=5% Similarity=-0.058 Sum_probs=38.3
Q ss_pred cCceEEEEeCCCCCCCCC----C-c------eeeecCccCcEEEEEeCCCCCeEEEee-CCCcEEEEecCC
Q psy1285 9 SLVTCFVWDRRTLNETTA----K-P------VGVLAGHRDGITFIDPKGDSRHLISNS-KDQTIKLWDVRK 67 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~----~-~------~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~~wd~~~ 67 (118)
.++.|++|++.... . + . .............++|+|++++++..+ .++.|.+||+.+
T Consensus 175 ~~~~v~v~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 242 (361)
T 3scy_A 175 GTDQIHKFNINPNA---NADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD 242 (361)
T ss_dssp TTTEEEEEEECTTC---CTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET
T ss_pred CCCEEEEEEEcCCC---CcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC
Confidence 46789999887521 1 1 1 111123445678999999999887666 689999999863
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.00 E-value=3.5e-05 Score=55.10 Aligned_cols=48 Identities=8% Similarity=-0.091 Sum_probs=36.5
Q ss_pred CcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------------cceecCCcEEEEeCCC
Q psy1285 37 DGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG---------------------AANSKDQTIKLWDVRK 86 (118)
Q Consensus 37 ~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~---------------------~s~~~d~~i~iwd~~~ 86 (118)
..+.+++|+|+ ..++.+ .++.+.+||+.+... +..+.++.|.+||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~ 150 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGK 150 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCc
Confidence 46899999999 665554 459999999875432 2235688999999988
No 161
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.00 E-value=9.3e-05 Score=48.37 Aligned_cols=96 Identities=9% Similarity=-0.025 Sum_probs=57.9
Q ss_pred ccCceEEEEeCCCCCCCCCCc--eeeecCc-cCcEEEEEeCCCCCeEEE-eeCCCcEEEEecCC--CC------------
Q psy1285 8 ASLVTCFVWDRRTLNETTAKP--VGVLAGH-RDGITFIDPKGDSRHLIS-NSKDQTIKLWDVRK--FN------------ 69 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~--~~~~~~h-~~~v~~~~~~~~~~~l~s-~~~d~~i~~wd~~~--~~------------ 69 (118)
..++.|++|++... +.. ...+..+ ...+..++|+|+|++++. ...++.+.+|++.. ..
T Consensus 159 ~~~~~v~~~~~~~~----g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 234 (347)
T 3hfq_A 159 LGSDKVYVYNVSDA----GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPA 234 (347)
T ss_dssp TTTTEEEEEEECTT----SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCT
T ss_pred CCCCEEEEEEECCC----CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCC
Confidence 34678999999731 222 2222222 235778999999996655 56688999998763 10
Q ss_pred -----c---------------cceecCCcEEEEeCCCC---cceeeecccCcceeeEeeee
Q psy1285 70 -----G---------------AANSKDQTIKLWDVRKF---SNKTAQRNTFRAVCEQNWEY 107 (118)
Q Consensus 70 -----~---------------~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~ 107 (118)
. ++...++.|.+|++... .....+..+...+..+.|++
T Consensus 235 ~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~sp 295 (347)
T 3hfq_A 235 DYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDP 295 (347)
T ss_dssp TCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECT
T ss_pred CCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECC
Confidence 0 34455789999998732 22333333334455555653
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.97 E-value=1.2e-05 Score=57.60 Aligned_cols=49 Identities=16% Similarity=0.108 Sum_probs=36.9
Q ss_pred CceEEEEeCCCCCCCCCCce--eeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCC
Q psy1285 10 LVTCFVWDRRTLNETTAKPV--GVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 67 (118)
++.|++||+.. ++.. ..+ ...+..++|||||+.|+.+. ++.|.+||+.+
T Consensus 89 ~~~i~~~d~~~-----g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~ 139 (719)
T 1z68_A 89 TATYYIYDLSN-----GEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPG 139 (719)
T ss_dssp EEEEEEEETTT-----TEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTT
T ss_pred ceEEEEEECCC-----Cccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCC
Confidence 68999999986 3321 112 24578899999999999875 78999999853
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.87 E-value=0.00011 Score=49.01 Aligned_cols=78 Identities=17% Similarity=0.315 Sum_probs=57.1
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEee----------CCCcEEEEecCCCCc-------
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNS----------KDQTIKLWDVRKFNG------- 70 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~d~~i~~wd~~~~~~------- 70 (118)
..|+.|.+||..+ .+....+.....+ .++|+|+++++.++. .+++|.+||..+...
T Consensus 28 ~~d~~v~v~D~~t-----~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~ 100 (361)
T 2oiz_A 28 LTESRVHVYDYTN-----GKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLP 100 (361)
T ss_dssp GGGCEEEEEETTT-----CCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEEC
T ss_pred cccCeEEEEECCC-----CeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcC
Confidence 4578999999876 5666666655444 899999999988775 367899999875321
Q ss_pred ----------------------ccee-c-CCcEEEEeCCCCcceee
Q psy1285 71 ----------------------AANS-K-DQTIKLWDVRKFSNKTA 92 (118)
Q Consensus 71 ----------------------~s~~-~-d~~i~iwd~~~~~~~~~ 92 (118)
.++. . +++|.+||+.+.+....
T Consensus 101 ~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 101 PKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp TTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred ccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 2233 2 57899999998877655
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.80 E-value=3.9e-05 Score=55.51 Aligned_cols=77 Identities=10% Similarity=0.039 Sum_probs=55.0
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCc-----EEEEEeCCCCCeEEEeeCC---------CcEEEEecCCCCc----
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDG-----ITFIDPKGDSRHLISNSKD---------QTIKLWDVRKFNG---- 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~s~~~d---------~~i~~wd~~~~~~---- 70 (118)
.|++|++||+.+ ++....+.+|... ...+.|||||+.|+.++.+ +.+.+||+.+...
T Consensus 34 ~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~ 108 (740)
T 4a5s_A 34 QENNILVFNAEY-----GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEE 108 (740)
T ss_dssp ETTEEEEEETTT-----CCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS
T ss_pred cCCcEEEEECCC-----CceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcc
Confidence 389999999987 4555556665532 2347889999999988876 5567999976432
Q ss_pred -----------------cceecCCcEEEEeCCCCcce
Q psy1285 71 -----------------AANSKDQTIKLWDVRKFSNK 90 (118)
Q Consensus 71 -----------------~s~~~d~~i~iwd~~~~~~~ 90 (118)
+.-..++.|.+||+.++...
T Consensus 109 ~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 109 RIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSY 145 (740)
T ss_dssp CCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCE
T ss_pred cCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceE
Confidence 33345789999999876643
No 165
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.72 E-value=0.00075 Score=47.88 Aligned_cols=82 Identities=15% Similarity=0.079 Sum_probs=61.0
Q ss_pred cccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecC--CCCc--------------
Q psy1285 7 VASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVR--KFNG-------------- 70 (118)
Q Consensus 7 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~--~~~~-------------- 70 (118)
...+++|.++|..+ .+.+..+. ....+..+.|+|+++++.+++.|+.|.+||+. +...
T Consensus 173 ~~~~~~V~viD~~t-----~~v~~~i~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia 246 (567)
T 1qks_A 173 LRDAGQIALIDGST-----YEIKTVLD-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIE 246 (567)
T ss_dssp ETTTTEEEEEETTT-----CCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEE
T ss_pred eCCCCeEEEEECCC-----CeEEEEEe-CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeE
Confidence 44578999999987 66666665 23456789999999999999999999999995 3221
Q ss_pred -------------cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 -------------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 -------------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
++...+++|.++|..+.+.+..+.
T Consensus 247 ~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 247 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred EccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 112235788999988887766544
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.70 E-value=9.5e-05 Score=47.93 Aligned_cols=53 Identities=8% Similarity=0.052 Sum_probs=38.1
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCC
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKF 68 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 68 (118)
++.|.+||+.. .+....+. ....+.+++|+|+++.|++++.++.|.+||..+.
T Consensus 274 ~~~v~~~d~~~-----~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 274 LNRLAKYDLKQ-----RKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp ESEEEEEETTT-----TEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred cCeEEEEECcc-----CeEEEEEc-CCCCccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 67899999876 55555554 2345678999999988877766677777776554
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.69 E-value=0.00099 Score=43.96 Aligned_cols=69 Identities=12% Similarity=0.014 Sum_probs=48.9
Q ss_pred CCceeeecCccCcEEE-----EEeCCCCCeEEEeeC-CCc--EEEEecCCCCc-----------------------ccee
Q psy1285 26 AKPVGVLAGHRDGITF-----IDPKGDSRHLISNSK-DQT--IKLWDVRKFNG-----------------------AANS 74 (118)
Q Consensus 26 ~~~~~~~~~h~~~v~~-----~~~~~~~~~l~s~~~-d~~--i~~wd~~~~~~-----------------------~s~~ 74 (118)
+.....+..|...... .+|+|||+.|+..+. ++. +.+||+.+... +.++
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~ 99 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK 99 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEE
T ss_pred CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEe
Confidence 5566667767665555 789999999998877 664 77788765322 4455
Q ss_pred cCCcEEEEeCCCCcceeeec
Q psy1285 75 KDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 75 ~d~~i~iwd~~~~~~~~~~~ 94 (118)
.++.|.+||+.+++......
T Consensus 100 ~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 100 DGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp TTTEEEEEETTTCCEEEEEE
T ss_pred CCCeEEEEECCCCcceeeee
Confidence 67789999999887654433
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.66 E-value=0.00063 Score=49.25 Aligned_cols=50 Identities=6% Similarity=-0.079 Sum_probs=38.3
Q ss_pred ceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCC
Q psy1285 11 VTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 67 (118)
+.+.+||+.+ ++. ..+..|.+.+...+|||||+.|+.+ .|+.|.+||+.+
T Consensus 92 ~~~~~~d~~~-----~~~-~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~ 141 (740)
T 4a5s_A 92 ASYDIYDLNK-----RQL-ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPN 141 (740)
T ss_dssp EEEEEEETTT-----TEE-CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTT
T ss_pred eEEEEEECCC-----CcE-EEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCC
Confidence 5677999986 332 2355677889999999999999887 467899998754
No 169
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.58 E-value=9.5e-05 Score=49.46 Aligned_cols=82 Identities=10% Similarity=0.055 Sum_probs=46.6
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc---------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG--------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------------- 70 (118)
..+.||.|..||..+ ++.+-.+.. +.+.+..+..++..+++++.|+.+..||..+...
T Consensus 14 ~gs~dg~v~a~d~~t-----G~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 14 VSTLDGSLHAVSKRT-----GSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp EEETTSEEEEEETTT-----CCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred EEcCCCEEEEEECCC-----CCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 356689999999987 566555543 4444444556677788888999999999865332
Q ss_pred ---------cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 ---------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 ---------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
++++.++.|..||.++++....+.
T Consensus 87 p~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~ 119 (369)
T 2hz6_A 87 PCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLS 119 (369)
T ss_dssp SCC-----CCCCEEEEEEEEECCC---------
T ss_pred ceEecCCEEEEEeCCCEEEEEECCCCcEEEEec
Confidence 456678899999999888766544
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.57 E-value=0.0012 Score=41.87 Aligned_cols=53 Identities=8% Similarity=0.141 Sum_probs=38.8
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecC--ccCcEEEEEeCCCCCeEEEeeCCC-cEEEEecC
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAG--HRDGITFIDPKGDSRHLISNSKDQ-TIKLWDVR 66 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~d~-~i~~wd~~ 66 (118)
..++.|++||.. ...+..+.. +...+..++++++++++++...++ .|.+||..
T Consensus 182 ~~~~~i~~~~~~------g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 182 NRAHCVKVFNYE------GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp GGGTEEEEEETT------CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CCCCEEEEEcCC------CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 346788999875 344444433 335788999999999888887776 99999864
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.54 E-value=0.00025 Score=47.20 Aligned_cols=50 Identities=12% Similarity=0.258 Sum_probs=37.9
Q ss_pred ceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCC
Q psy1285 11 VTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKF 68 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 68 (118)
++|.+||+.+ .+.+.++..+. +.+++|+|++++|.+++. ++|.+||..+.
T Consensus 286 ~~v~viD~~t-----~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 286 AEIWVMDTKT-----KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp SEEEEEETTT-----TEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred ceEEEEECCC-----CcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 4899999987 67778887665 899999999998887654 55555555443
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.53 E-value=0.0021 Score=41.98 Aligned_cols=92 Identities=5% Similarity=-0.065 Sum_probs=60.2
Q ss_pred cCceEEEEeCCCCCCCCCCceeeec----------CccCcEEEEEeCCC-CCeEEEeeCCCcEEEEecCCCCc-------
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLA----------GHRDGITFIDPKGD-SRHLISNSKDQTIKLWDVRKFNG------- 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~-~~~l~s~~~d~~i~~wd~~~~~~------- 70 (118)
.++.|++||.. +..+..+. ++......++++|+ ++++++...++.|++||..+...
T Consensus 164 ~~~~I~~~~~~------g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~ 237 (329)
T 3fvz_A 164 CNSRIVQFSPS------GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA 237 (329)
T ss_dssp SCCEEEEECTT------SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT
T ss_pred CCCeEEEEcCC------CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc
Confidence 46788888854 34444443 23345889999998 77777777889999999873221
Q ss_pred ------------------------cceecCCcEEEEeCCCCcceeeec---ccCcceeeEeee
Q psy1285 71 ------------------------AANSKDQTIKLWDVRKFSNKTAQR---NTFRAVCEQNWE 106 (118)
Q Consensus 71 ------------------------~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~v~~~~~~ 106 (118)
++...+..|++||+.+++....+. .+......+.++
T Consensus 238 ~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~ 300 (329)
T 3fvz_A 238 SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVAS 300 (329)
T ss_dssp TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEEC
T ss_pred ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEEC
Confidence 222334589999998888776652 333445555554
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.51 E-value=0.00051 Score=45.30 Aligned_cols=53 Identities=11% Similarity=0.081 Sum_probs=35.8
Q ss_pred ceEEEEeCCCCCCCCCCceeeecCccCc-EEEEEeCCCCCeEEEeeCCCcEEEEecCCCC
Q psy1285 11 VTCFVWDRRTLNETTAKPVGVLAGHRDG-ITFIDPKGDSRHLISNSKDQTIKLWDVRKFN 69 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~ 69 (118)
..|.+||+.. .+... +..+... ...+.|+|+++.|+..+.++.+.+||+....
T Consensus 60 ~~l~~~d~~~-----~~~~~-l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 60 RNYYLLNLET-----QQAVQ-LTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp CEEEEEETTT-----TEEEE-CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ceEEEEECCC-----CcEEE-eecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 4677777765 33322 2223333 2337899999999999999899999987643
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.42 E-value=0.00055 Score=48.57 Aligned_cols=33 Identities=0% Similarity=-0.221 Sum_probs=28.2
Q ss_pred ccCcEEEEEeCCCCCeEEEeeCC----------CcEEEEecCC
Q psy1285 35 HRDGITFIDPKGDSRHLISNSKD----------QTIKLWDVRK 67 (118)
Q Consensus 35 h~~~v~~~~~~~~~~~l~s~~~d----------~~i~~wd~~~ 67 (118)
|...+..++|+|||+.|+..+.+ ..|.+||+.+
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 56678899999999999988876 5799999876
No 175
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.37 E-value=0.0021 Score=42.49 Aligned_cols=54 Identities=11% Similarity=-0.096 Sum_probs=38.9
Q ss_pred cCceEEEEeCCCCCCCCCCceeeec----CccCcEEEEEeCCCCCeEEEee-CCCcEEEEecC
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLA----GHRDGITFIDPKGDSRHLISNS-KDQTIKLWDVR 66 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~~-~d~~i~~wd~~ 66 (118)
.++.+++|++... +.....+. .+...+.+++|+|+|++++++. .++.|.+||+.
T Consensus 117 ~~g~v~v~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~ 175 (365)
T 1jof_A 117 FAGYGNVFSVSET----GKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKL 175 (365)
T ss_dssp SCCEEEEEEECTT----CCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCceEEEEccCCC----CcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEEC
Confidence 5889999999731 33322222 2456789999999999887665 36789999986
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.34 E-value=0.0054 Score=38.84 Aligned_cols=52 Identities=10% Similarity=0.238 Sum_probs=38.4
Q ss_pred cCceEEEEeCCCCCCCCCCceeeec--CccCcEEEEEeCCCCCeEEEeeCCCcEEEEecC
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLA--GHRDGITFIDPKGDSRHLISNSKDQTIKLWDVR 66 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~ 66 (118)
.++.|.+||.. ......+. .+...+.+++++++++.+++...++.|.+||..
T Consensus 140 ~~~~i~~~~~~------g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 140 KVMRVIIFDQN------GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp TTTEEEEECTT------SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred CCCEEEEEcCC------CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC
Confidence 45788888864 33444443 345568999999999888887788999999975
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.32 E-value=0.0036 Score=40.54 Aligned_cols=52 Identities=8% Similarity=-0.056 Sum_probs=38.4
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCC
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 67 (118)
+.++.++.|. ......+..+...+.+++|+++++.++++..++.|.+||..+
T Consensus 24 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~ 75 (333)
T 2dg1_A 24 ISESELQTIT--------AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET 75 (333)
T ss_dssp CCGGGSCEEE--------CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred eecccCcccc--------cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC
Confidence 4566777772 334445556666788999999999777888889999998764
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.31 E-value=0.01 Score=37.79 Aligned_cols=53 Identities=2% Similarity=-0.095 Sum_probs=41.4
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCC
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 67 (118)
..++.|..||... . ...+..+...+.+++++++++++++...++.|.+||..+
T Consensus 47 ~~~~~i~~~~~~~-----~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 47 VRQNRTWAWSDDG-----Q--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp GGGTEEEEEETTS-----C--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT
T ss_pred CCCCEEEEEECCC-----C--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC
Confidence 3467888888875 3 455566777899999999999887777778899999854
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.28 E-value=0.0048 Score=43.77 Aligned_cols=53 Identities=11% Similarity=0.052 Sum_probs=35.3
Q ss_pred ceEEEEeCC-CCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCC--cEEEEec
Q psy1285 11 VTCFVWDRR-TLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQ--TIKLWDV 65 (118)
Q Consensus 11 g~v~iwd~~-~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~--~i~~wd~ 65 (118)
..|.+||+. .+.. ........+|...+..+.|+|||+.++++..++ .|.+||+
T Consensus 217 ~~i~~~d~~~~g~~--~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 217 TELKTARVTEDGRF--ADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDP 272 (662)
T ss_dssp EEEEEEEECTTSCE--EEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECT
T ss_pred cEEEEEEECCCCcc--cccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEEC
Confidence 478888887 3100 033333344567899999999999777888888 4555554
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.19 E-value=0.0028 Score=45.60 Aligned_cols=35 Identities=9% Similarity=0.078 Sum_probs=27.2
Q ss_pred CccCcEEEEEeCCCCCeEE-----EeeCCCcEEEEecCCC
Q psy1285 34 GHRDGITFIDPKGDSRHLI-----SNSKDQTIKLWDVRKF 68 (118)
Q Consensus 34 ~h~~~v~~~~~~~~~~~l~-----s~~~d~~i~~wd~~~~ 68 (118)
+|...+..++|||||+.|+ .|+.+..|++||+.+.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg 157 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG 157 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC
Confidence 3444688999999999998 4445678999998653
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.19 E-value=0.0032 Score=45.38 Aligned_cols=51 Identities=14% Similarity=0.019 Sum_probs=36.6
Q ss_pred eEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCc----------------EEEEecCCC
Q psy1285 12 TCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQT----------------IKLWDVRKF 68 (118)
Q Consensus 12 ~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~----------------i~~wd~~~~ 68 (118)
+|++||+.. ++...... ....+..++|+||++.|+.++.++. |.+|++.+.
T Consensus 152 ~i~v~d~~t-----g~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~ 218 (710)
T 2xdw_A 152 TIKFMKVDG-----AKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTD 218 (710)
T ss_dssp EEEEEETTT-----TEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSC
T ss_pred EEEEEECCC-----CCCCcccc-cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCC
Confidence 899999986 44433222 1223567999999999998887765 999998653
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.16 E-value=0.0032 Score=40.91 Aligned_cols=50 Identities=10% Similarity=0.086 Sum_probs=34.2
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCC---Cc--EEEEecCCC
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKD---QT--IKLWDVRKF 68 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~--i~~wd~~~~ 68 (118)
.++.|.+||+.. .+. ..+ ..+..+.|+|+|+.|+..+.+ +. |.+||+...
T Consensus 41 ~~~~l~~~d~~~-----~~~-~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g 95 (347)
T 2gop_A 41 YENTIVIENLKN-----NAR-RFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL 95 (347)
T ss_dssp EEEEEEEEETTT-----CCE-EEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT
T ss_pred ccceEEEEeCCC-----Cce-EEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC
Confidence 367788888875 332 223 457889999999998877653 33 667776643
No 183
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.09 E-value=0.0007 Score=45.24 Aligned_cols=79 Identities=14% Similarity=0.000 Sum_probs=45.8
Q ss_pred cccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc----------------
Q psy1285 7 VASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG---------------- 70 (118)
Q Consensus 7 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~---------------- 70 (118)
.+.|+.++.||..+ ++.+-.+..+. ...++|++..+++++.|+.+..||.++...
T Consensus 98 g~~dg~v~a~D~~t-----G~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~ 168 (369)
T 2hz6_A 98 GKKQDIWYVIDLLT-----GEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLPED 168 (369)
T ss_dssp CEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCCCC
T ss_pred EeCCCEEEEEECCC-----CcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccccCccccC
Confidence 45688999999987 45444443332 234567778888888999999999876543
Q ss_pred --------cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 --------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 --------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
..++.|+.|..||.++++......
T Consensus 169 ~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 169 DVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp CTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred CccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 234668999999999998876654
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.01 E-value=0.0096 Score=38.92 Aligned_cols=81 Identities=16% Similarity=0.104 Sum_probs=57.7
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc-----------------
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG----------------- 70 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~----------------- 70 (118)
..++.|.++|..+ .+.+.++. .......++++++++..++...++.|.+||..+...
T Consensus 61 ~~~~~v~viD~~t-----~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~ 134 (328)
T 3dsm_A 61 NNSHVIFAIDINT-----FKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE 134 (328)
T ss_dssp GGGTEEEEEETTT-----CCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC
T ss_pred cCCCEEEEEECcc-----cEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc
Confidence 3568999999987 66666664 346678999988885555554789999999875321
Q ss_pred ---------ccee--cCCcEEEEeCCCCcceeeec
Q psy1285 71 ---------AANS--KDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 ---------~s~~--~d~~i~iwd~~~~~~~~~~~ 94 (118)
..+. .++.|.++|+.+.+....+.
T Consensus 135 ~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 135 QMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp CEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred eEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 1222 37789999999887665443
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.97 E-value=0.0088 Score=37.39 Aligned_cols=54 Identities=4% Similarity=-0.133 Sum_probs=36.9
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCC
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKF 68 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 68 (118)
++.|.+||... .........+...+.++++.++|+..++...++.|.+||....
T Consensus 170 ~~~i~~~~~~~-----~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 170 NNRVVKLEAES-----NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp GTEEEEECTTT-----CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred CCEEEEEecCC-----CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 46778888764 2222222223366889999999987777777889999988653
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.86 E-value=0.011 Score=37.87 Aligned_cols=53 Identities=9% Similarity=-0.044 Sum_probs=40.2
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCcc-CcEEEEEeCCCCCeEEEeeCCCcEEEEec
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHR-DGITFIDPKGDSRHLISNSKDQTIKLWDV 65 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~d~~i~~wd~ 65 (118)
..+.|+.|.+||..+ ++.+-.+..+. ..+.++.+.|+|+.+++ .++.|..||.
T Consensus 10 ~~~~~~~v~~~d~~t-----G~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~ 63 (276)
T 3no2_A 10 GGSGWNKIAIINKDT-----KEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR 63 (276)
T ss_dssp ECTTCSEEEEEETTT-----TEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT
T ss_pred eeCCCCEEEEEECCC-----CeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC
Confidence 456789999999976 67777776554 46789999999998884 4566766665
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.82 E-value=0.037 Score=34.49 Aligned_cols=74 Identities=3% Similarity=-0.017 Sum_probs=47.9
Q ss_pred CceEEEEeCCCCCCCCCCceeeec-CccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc------------------
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLA-GHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------------ 70 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------------ 70 (118)
++.|.+||... ... ..+. .....+.++++.++++..++...++.|.+|+..+...
T Consensus 86 ~~~i~~~d~~~-----~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~ 159 (270)
T 1rwi_B 86 NNRVVTLAAGS-----NNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN 159 (270)
T ss_dssp TTEEEEECTTC-----SCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT
T ss_pred CCEEEEEeCCC-----ceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC
Confidence 56788888764 222 2222 2235688999999998777777788899887643221
Q ss_pred -----cceecCCcEEEEeCCCCcc
Q psy1285 71 -----AANSKDQTIKLWDVRKFSN 89 (118)
Q Consensus 71 -----~s~~~d~~i~iwd~~~~~~ 89 (118)
++...++.|.+||......
T Consensus 160 ~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 160 SGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp TCCEEEEEGGGTEEEEECTTTCCE
T ss_pred CCCEEEEECCCCEEEEEecCCCce
Confidence 3333456788888776544
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.81 E-value=0.0064 Score=43.73 Aligned_cols=52 Identities=12% Similarity=-0.083 Sum_probs=36.6
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcE--EEEEeCCCCCeEEEeeCCCc-------------EEEEecCCC
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGI--TFIDPKGDSRHLISNSKDQT-------------IKLWDVRKF 68 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~s~~~d~~-------------i~~wd~~~~ 68 (118)
+.+|++||+.++ +.+. ..+...+ ..++|+|||+.|+..+.|.. |.+|++.+.
T Consensus 146 ~~~i~v~dl~tg-----~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~ 212 (695)
T 2bkl_A 146 EAVLHVIDVDSG-----EWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTE 212 (695)
T ss_dssp CCEEEEEETTTC-----CBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSC
T ss_pred eEEEEEEECCCC-----CCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCC
Confidence 478999999873 3220 1122222 57899999999999888766 999998654
No 189
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.79 E-value=0.0066 Score=39.59 Aligned_cols=54 Identities=19% Similarity=0.191 Sum_probs=42.6
Q ss_pred cCceEEEEeCCCCCCCCCCceeee---cCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCC
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVL---AGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 67 (118)
.+..|++||... +..+..+ .++...+..++++|+|..+++...++.|.+|++..
T Consensus 266 ~~~~v~~~~~~~-----g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 266 EPVQGFVMNFSS-----GEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCCEEEEETTT-----CCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CCcEEEEEEcCC-----CeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 345899999876 5666665 35677789999999998888888889999998753
No 190
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.69 E-value=0.055 Score=34.68 Aligned_cols=72 Identities=10% Similarity=-0.046 Sum_probs=49.6
Q ss_pred ccCcEEEEEeCCCCCeE-EEeeCCCcEEEEecC--CCC--------------c--------------cceecCCcEEEEe
Q psy1285 35 HRDGITFIDPKGDSRHL-ISNSKDQTIKLWDVR--KFN--------------G--------------AANSKDQTIKLWD 83 (118)
Q Consensus 35 h~~~v~~~~~~~~~~~l-~s~~~d~~i~~wd~~--~~~--------------~--------------~s~~~d~~i~iwd 83 (118)
.....+.++|+|+++.| ++.+.++.|.+||+. +.. . ++....+.|..||
T Consensus 147 ~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 147 QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEEC
T ss_pred ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEc
Confidence 34456889999999866 455567889999863 211 0 3333456799999
Q ss_pred CCCCcceeeecccCcceeeEeee
Q psy1285 84 VRKFSNKTAQRNTFRAVCEQNWE 106 (118)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~~ 106 (118)
..+++....+......++++.|.
T Consensus 227 ~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 227 PVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp TTTCCEEEEEECSSSBEEEEEEE
T ss_pred CCCceEEEEEECCCCCceEEEEe
Confidence 98888777666555567888886
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.53 E-value=0.018 Score=37.76 Aligned_cols=65 Identities=9% Similarity=-0.015 Sum_probs=42.1
Q ss_pred CCceeeecCccCc-----EEEEEeCCCCCeEEEeeCC---CcEEEEecCCCCc-----------------------ccee
Q psy1285 26 AKPVGVLAGHRDG-----ITFIDPKGDSRHLISNSKD---QTIKLWDVRKFNG-----------------------AANS 74 (118)
Q Consensus 26 ~~~~~~~~~h~~~-----v~~~~~~~~~~~l~s~~~d---~~i~~wd~~~~~~-----------------------~s~~ 74 (118)
+.....+..+... +..++|+|+|+.|+..... ..+.+||+.+... +.++
T Consensus 20 g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~ 99 (396)
T 3c5m_A 20 QVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVK 99 (396)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEE
T ss_pred CcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEE
Confidence 4444555444332 6778999999998766443 3677888765321 3455
Q ss_pred cCCcEEEEeCCCCcce
Q psy1285 75 KDQTIKLWDVRKFSNK 90 (118)
Q Consensus 75 ~d~~i~iwd~~~~~~~ 90 (118)
.++.|.+||+.+++..
T Consensus 100 ~~~~l~~~d~~~~~~~ 115 (396)
T 3c5m_A 100 NELNLMKVDLETLEEQ 115 (396)
T ss_dssp TTTEEEEEETTTCCEE
T ss_pred cCCcEEEEECCCCCcE
Confidence 5667899998877644
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.47 E-value=0.014 Score=41.99 Aligned_cols=35 Identities=14% Similarity=0.007 Sum_probs=26.7
Q ss_pred ccCcEEEEEeCCCCCeEEEeeCCC-----cEEEEecCCCC
Q psy1285 35 HRDGITFIDPKGDSRHLISNSKDQ-----TIKLWDVRKFN 69 (118)
Q Consensus 35 h~~~v~~~~~~~~~~~l~s~~~d~-----~i~~wd~~~~~ 69 (118)
|...+..++|||||+.|+.+..++ .|++||+.+..
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~ 162 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK 162 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC
Confidence 334578899999999998665433 89999998653
No 193
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.36 E-value=0.028 Score=36.24 Aligned_cols=55 Identities=15% Similarity=0.031 Sum_probs=39.0
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCC----CcEEEEecCC
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKD----QTIKLWDVRK 67 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----~~i~~wd~~~ 67 (118)
..++.|.+||... .+.......+...+.+++++++++++++...+ +.|.+||...
T Consensus 63 ~~~~~i~~~d~~~-----~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 63 VFEGNIFKINPET-----KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp TTTCEEEEECTTT-----CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred CCCCEEEEEeCCC-----CcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence 3467888888765 34333333456789999999999887776666 6888898654
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.18 E-value=0.12 Score=32.86 Aligned_cols=72 Identities=8% Similarity=-0.015 Sum_probs=48.4
Q ss_pred ecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCC-C----------------Cc---------cceecCCcEEEEeCC
Q psy1285 32 LAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRK-F----------------NG---------AANSKDQTIKLWDVR 85 (118)
Q Consensus 32 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~----------------~~---------~s~~~d~~i~iwd~~ 85 (118)
+..+......++|+|+++.+++...++.|.+||+.. . .. ..+. ++.|.+||..
T Consensus 167 ~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~ 245 (296)
T 3e5z_A 167 PIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD 245 (296)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT
T ss_pred eecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC
Confidence 344566778999999999887777788999998751 0 01 1222 6789999986
Q ss_pred CCcceeeecccCcceeeEeee
Q psy1285 86 KFSNKTAQRNTFRAVCEQNWE 106 (118)
Q Consensus 86 ~~~~~~~~~~~~~~v~~~~~~ 106 (118)
++....+..+.. +..+.|.
T Consensus 246 -g~~~~~~~~~~~-~~~~~f~ 264 (296)
T 3e5z_A 246 -GDELGRVLTPQT-TSNLCFG 264 (296)
T ss_dssp -SCEEEEEECSSC-CCEEEEE
T ss_pred -CCEEEEEECCCC-ceeEEEE
Confidence 555555544444 6666664
No 195
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.16 E-value=0.041 Score=37.34 Aligned_cols=78 Identities=13% Similarity=0.125 Sum_probs=54.4
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEee----------CCCcEEEEecCCCCc---------
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNS----------KDQTIKLWDVRKFNG--------- 70 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~d~~i~~wd~~~~~~--------- 70 (118)
++.|.+.|..+ .+.+.++..-..+ .+.++|+++.+..+. .++.|.+||..+...
T Consensus 58 ~~~V~ViD~~t-----~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g 130 (386)
T 3sjl_D 58 VTQQFVIDGEA-----GRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA 130 (386)
T ss_dssp SEEEEEEETTT-----TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCEEEEEECCC-----CeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCc
Confidence 67899999987 6666666532333 499999999876654 367899999875321
Q ss_pred ---------------------ccee--cCCcEEEEeCCCCcceeeec
Q psy1285 71 ---------------------AANS--KDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 ---------------------~s~~--~d~~i~iwd~~~~~~~~~~~ 94 (118)
..+. .++.|.++|+.+.+....+.
T Consensus 131 ~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 131 PRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp CCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred cccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 2222 25789999998888776554
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.12 E-value=0.093 Score=34.20 Aligned_cols=76 Identities=11% Similarity=-0.069 Sum_probs=50.5
Q ss_pred ceEEEEeCCCCCCCCCCceeeecCc-cCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc-------------------
Q psy1285 11 VTCFVWDRRTLNETTAKPVGVLAGH-RDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------------- 70 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------------- 70 (118)
+.|.++|..+ .+....+... ......++++|+++.|..... .|.+||..+...
T Consensus 203 ~~v~~id~~t-----~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vd 275 (328)
T 3dsm_A 203 PSLYRIDAET-----FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVN 275 (328)
T ss_dssp CEEEEEETTT-----TEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEEC
T ss_pred ceEEEEECCC-----CeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEc
Confidence 6788888875 4544444321 235789999999888876654 888999865321
Q ss_pred -------cce----ecCCcEEEEeCCCCcceeeec
Q psy1285 71 -------AAN----SKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 -------~s~----~~d~~i~iwd~~~~~~~~~~~ 94 (118)
++. ..++.|.+||.. ++....+.
T Consensus 276 p~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 276 PNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp TTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred CCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 333 346778888887 66665554
No 197
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.04 E-value=0.034 Score=36.66 Aligned_cols=53 Identities=9% Similarity=0.066 Sum_probs=36.5
Q ss_pred CceEEEEeCC-CCCCCCCCceeeec--CccCcEEEEEeCCCCCeEEEeeC-CCcEEEEec
Q psy1285 10 LVTCFVWDRR-TLNETTAKPVGVLA--GHRDGITFIDPKGDSRHLISNSK-DQTIKLWDV 65 (118)
Q Consensus 10 dg~v~iwd~~-~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~-d~~i~~wd~ 65 (118)
++.|++||+. .+. ...+..+. .|...+..++|+|+|+++++++. ++.|.+|++
T Consensus 166 ~~~v~~~~~~~~g~---~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 166 ANKLWTHRKLASGE---VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp TTEEEEEEECTTSC---EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEEECCCCC---EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 5789999997 411 11223333 24566899999999998877664 678888864
No 198
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.03 E-value=0.058 Score=39.05 Aligned_cols=37 Identities=8% Similarity=0.068 Sum_probs=29.8
Q ss_pred CcEEEEecCCCCc----------------------cceecCCcEEEEeCCCCcceeeec
Q psy1285 58 QTIKLWDVRKFNG----------------------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 58 ~~i~~wd~~~~~~----------------------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
+.+..||+.+.+. +.++.|+.+++||.++++.+..+.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeee
Confidence 6788888876443 456789999999999999988775
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.87 E-value=0.043 Score=37.25 Aligned_cols=72 Identities=11% Similarity=-0.020 Sum_probs=53.4
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCc-------cCcEEEEEeCCCCCeEEEeeC--CCcEEEEecCCCCc----------
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGH-------RDGITFIDPKGDSRHLISNSK--DQTIKLWDVRKFNG---------- 70 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~--d~~i~~wd~~~~~~---------- 70 (118)
++.|.+||..+ .+.+.++.-- ......+.|+|||+++..... ++.|.++|+.+...
T Consensus 108 ~~~VsviD~~t-----~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~ 182 (386)
T 3sjl_D 108 TDYVEVFDPVT-----LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCY 182 (386)
T ss_dssp EEEEEEECTTT-----CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEE
T ss_pred CCEEEEEECCC-----CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcc
Confidence 57899999987 5666555311 123567899999998887653 68999999987643
Q ss_pred ----------cceecCCcEEEEeCCC
Q psy1285 71 ----------AANSKDQTIKLWDVRK 86 (118)
Q Consensus 71 ----------~s~~~d~~i~iwd~~~ 86 (118)
++.+.||++.+.++..
T Consensus 183 ~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 183 HIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEEEETTEEEEEETTSCEEEEECCS
T ss_pred eeecCCCceeEEECCCCCEEEEECCC
Confidence 3557789999998876
No 200
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=95.74 E-value=0.022 Score=36.86 Aligned_cols=38 Identities=24% Similarity=0.255 Sum_probs=25.1
Q ss_pred eEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeC
Q psy1285 12 TCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSK 56 (118)
Q Consensus 12 ~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 56 (118)
.|.+||+.. ++...... +.. +..+.|+|+++.|+..+.
T Consensus 86 ~l~~~~~~~-----g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~ 123 (347)
T 2gop_A 86 EIWVADLET-----LSSKKILE-AKN-IRSLEWNEDSRKLLIVGF 123 (347)
T ss_dssp EEEEEETTT-----TEEEEEEE-ESE-EEEEEECTTSSEEEEEEE
T ss_pred eEEEEECCC-----CceEEEEc-CCC-ccceeECCCCCEEEEEEc
Confidence 466667764 34333332 333 899999999999887764
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.68 E-value=0.055 Score=36.25 Aligned_cols=53 Identities=9% Similarity=0.079 Sum_probs=37.2
Q ss_pred ceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCC-eEEEee-CCCcEEEEecCCCC
Q psy1285 11 VTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSR-HLISNS-KDQTIKLWDVRKFN 69 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~-~d~~i~~wd~~~~~ 69 (118)
+.|.+.|..+ .+.+.++. -.....++.|+||++ .+.++. .++.|.++|..+.+
T Consensus 298 ~~V~VID~~t-----~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 298 KEVTSVTGLV-----GQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred CeEEEEECCC-----CEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 5688888876 66666664 334578999999998 666665 36677777766554
No 202
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.65 E-value=0.22 Score=31.77 Aligned_cols=80 Identities=8% Similarity=-0.088 Sum_probs=51.4
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCc-cCcEEEEEeCCCCCeEEEeeC-CCcEEEEecCCCC-----------c----
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGH-RDGITFIDPKGDSRHLISNSK-DQTIKLWDVRKFN-----------G---- 70 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~-d~~i~~wd~~~~~-----------~---- 70 (118)
+.++.|..||. . ++.+-.+... ...+.++.+.++|+.+++.+. ++.+..+|..... .
T Consensus 53 s~~~~V~~~d~-~-----G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~ 126 (276)
T 3no2_A 53 SYSKGAKMITR-D-----GRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQ 126 (276)
T ss_dssp ECBSEEEEECT-T-----SCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGS
T ss_pred eCCCCEEEECC-C-----CCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCccccc
Confidence 34566777777 4 5666666543 346788889999999888766 5556555532100 0
Q ss_pred -------------cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 -------------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 -------------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
++...++.|..||.. ++....+.
T Consensus 127 ~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~ 162 (276)
T 3no2_A 127 FRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVK 162 (276)
T ss_dssp CSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEE
T ss_pred ccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEE
Confidence 444567888888887 77666554
No 203
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.62 E-value=0.16 Score=36.90 Aligned_cols=38 Identities=16% Similarity=0.133 Sum_probs=30.9
Q ss_pred CCcEEEEecCCCCc----------------------cceecCCcEEEEeCCCCcceeeec
Q psy1285 57 DQTIKLWDVRKFNG----------------------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 57 d~~i~~wd~~~~~~----------------------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
++.+..||+.+.+. ..|+.|+.|+.||.++++.+.++.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeee
Confidence 36788999887543 557789999999999999988775
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.55 E-value=0.4 Score=34.83 Aligned_cols=56 Identities=16% Similarity=0.063 Sum_probs=36.1
Q ss_pred CceEEEEeCCCCCCCCCCceeeec--CccCcEEEEEeCCCCCeEEEeeCC-----CcEEEEecCCC
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLA--GHRDGITFIDPKGDSRHLISNSKD-----QTIKLWDVRKF 68 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~ 68 (118)
...|++|++.+.. ......+. .+...+..+.|+|||++|+..+.+ ..|.+||+.+.
T Consensus 242 ~~~v~~~~lgt~~---~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 242 NQTVWLHRLGTPQ---SADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp CCEEEEEETTSCG---GGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred CCEEEEEECCCCc---hhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 3458888886521 11122222 233458899999999988876654 37999998654
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.41 E-value=0.075 Score=38.56 Aligned_cols=50 Identities=12% Similarity=0.010 Sum_probs=32.9
Q ss_pred ceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCc--------------EEEEecCC
Q psy1285 11 VTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQT--------------IKLWDVRK 67 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~--------------i~~wd~~~ 67 (118)
.+|++||+.. ++.+.. ..+...+..++|+|| +.|+.++.++. |.+|++.+
T Consensus 189 ~~i~v~dl~t-----g~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt 252 (741)
T 1yr2_A 189 RTVKFVGVAD-----GKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGT 252 (741)
T ss_dssp EEEEEEETTT-----CCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTS
T ss_pred EEEEEEECCC-----CCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCC
Confidence 5799999987 443322 112222357889999 88888776554 88888754
No 206
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.36 E-value=0.44 Score=33.88 Aligned_cols=60 Identities=8% Similarity=-0.009 Sum_probs=42.4
Q ss_pred cccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeC----CCCCeEEEeeC-CCcEEEEecCCCCc
Q psy1285 7 VASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPK----GDSRHLISNSK-DQTIKLWDVRKFNG 70 (118)
Q Consensus 7 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~l~s~~~-d~~i~~wd~~~~~~ 70 (118)
++.|+.|.+||+... +.+.+.++.. ......+.|+ |+|+++.++.. ++.+.++|..+...
T Consensus 214 ~~~dg~V~viD~~~~---t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 214 IGRDGKVNMIDLWMK---EPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP 278 (567)
T ss_dssp EETTSEEEEEETTSS---SCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE
T ss_pred EcCCCeEEEEECCCC---CCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE
Confidence 456889999999510 1455566653 3346789999 69998876654 58999999876543
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.20 E-value=0.14 Score=32.49 Aligned_cols=54 Identities=6% Similarity=0.091 Sum_probs=36.7
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEE-EeeCCCcEEEEecCC
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLI-SNSKDQTIKLWDVRK 67 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~~wd~~~ 67 (118)
.++.|.+||..+ .+....+..+...+.+++|+++++.|. +...++.|..|++..
T Consensus 245 ~~~~i~~~d~~~-----g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 245 GSSHIEVFGPDG-----GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTTEEEEECTTC-----BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEcCCC-----CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 456788888764 344444555557789999999998554 444566777777653
No 208
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.17 E-value=0.18 Score=32.55 Aligned_cols=81 Identities=12% Similarity=0.060 Sum_probs=52.9
Q ss_pred ccccCceEEEEeCCCCCCCCCCceeeecCccCcEE--EEEeCCCCCeEEEeeCCCcEEEEecCCCCc-------------
Q psy1285 6 QVASLVTCFVWDRRTLNETTAKPVGVLAGHRDGIT--FIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------- 70 (118)
Q Consensus 6 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------- 70 (118)
..+.+|.|+++|+.+ ++....+ -....+ .+.+.. ++.....-.++.+.++|..++..
T Consensus 70 stG~~g~v~~iD~~T-----gkv~~~~--l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGL 141 (268)
T 3nok_A 70 STGHQGTLRQLSLES-----AQPVWME--RLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGL 141 (268)
T ss_dssp EETTTTEEEECCSSC-----SSCSEEE--ECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCE
T ss_pred EcCCCCEEEEEECCC-----CcEEeEE--CCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEE
Confidence 456677899999987 5555554 222333 355543 23444455688999999987553
Q ss_pred -------cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 -------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 -------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
..+..+++|.++|..+.+....+.
T Consensus 142 t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 142 CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp EEETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred ecCCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 222347789999999988776554
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=94.97 E-value=0.36 Score=32.28 Aligned_cols=74 Identities=9% Similarity=-0.125 Sum_probs=48.9
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCc-------cCcEEEEEeCCCCCeEEEeeC--CCcEEEEecCCCCc----------
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGH-------RDGITFIDPKGDSRHLISNSK--DQTIKLWDVRKFNG---------- 70 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~--d~~i~~wd~~~~~~---------- 70 (118)
++.|.++|..+ .+.+..+..- ......+.++|+|++|..+.. ++.|.++| .+...
T Consensus 96 ~~~v~viD~~t-----~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~ 169 (373)
T 2mad_H 96 TDYVEVFDPVT-----FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC 169 (373)
T ss_pred CCeEEEEECCC-----CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce
Confidence 57899999876 4444443211 123457899999999987764 57899999 76432
Q ss_pred -----------cceecCCcEEEEeCCCCcce
Q psy1285 71 -----------AANSKDQTIKLWDVRKFSNK 90 (118)
Q Consensus 71 -----------~s~~~d~~i~iwd~~~~~~~ 90 (118)
++.+.|+++.++|. +++..
T Consensus 170 ~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~ 199 (373)
T 2mad_H 170 YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAA 199 (373)
T ss_pred EEEEeCCCceEEEEcCCCCEEEEEC-CCcEE
Confidence 12235778888888 55443
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.95 E-value=0.18 Score=31.95 Aligned_cols=60 Identities=17% Similarity=0.196 Sum_probs=37.9
Q ss_pred cCceEEEEeCCC-CCCCCCCceeeecCcc-CcEEEEEeCCCCCeEEEeeCCCcEEEEecCCC
Q psy1285 9 SLVTCFVWDRRT-LNETTAKPVGVLAGHR-DGITFIDPKGDSRHLISNSKDQTIKLWDVRKF 68 (118)
Q Consensus 9 ~dg~v~iwd~~~-~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 68 (118)
.++.|.+||... +..........+..+. ..+..+++.++|+..++...++.|.+||..+.
T Consensus 196 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 196 PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC
Confidence 356788888652 1000001222233333 56788999999988888777889999998743
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.04 E-value=0.39 Score=33.01 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=53.6
Q ss_pred ceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEee----------CCCcEEEEecCCCCc----------
Q psy1285 11 VTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNS----------KDQTIKLWDVRKFNG---------- 70 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~d~~i~~wd~~~~~~---------- 70 (118)
+.|.+.|..+ .+.+.++..=..+ .+.++||++.+..+. .++.|.++|..+...
T Consensus 99 ~~VsVID~~t-----~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~ 171 (426)
T 3c75_H 99 TQQFVIDGST-----GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP 171 (426)
T ss_dssp EEEEEEETTT-----TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CeEEEEECCC-----CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc
Confidence 7999999987 6666666522333 899999999877665 367899999875321
Q ss_pred --------------------ccee-c-CCcEEEEeCCCCcceeeec
Q psy1285 71 --------------------AANS-K-DQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 --------------------~s~~-~-d~~i~iwd~~~~~~~~~~~ 94 (118)
..+. . ++.|.+.|+.+.+....+.
T Consensus 172 r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 172 RFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp CCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred ccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE
Confidence 2222 2 5678888988887766554
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.01 E-value=0.24 Score=34.00 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=37.8
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCC-eEEEee-CCCcEEEEecCCCC
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSR-HLISNS-KDQTIKLWDVRKFN 69 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~-~d~~i~~wd~~~~~ 69 (118)
++.|.+.|..+ .+.+.++.. ......+.|+|+++ ++.+.. .++.|.++|..+..
T Consensus 349 s~~VsVID~~T-----~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 349 SRFVVVLNAET-----GERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp EEEEEEEETTT-----CCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEECCC-----CeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 35788888876 666666652 23578999999998 777765 36667777766554
No 213
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=93.96 E-value=0.16 Score=34.09 Aligned_cols=52 Identities=12% Similarity=0.105 Sum_probs=34.1
Q ss_pred eEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCe-EEEee-CCCcEEEEecCCCC
Q psy1285 12 TCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRH-LISNS-KDQTIKLWDVRKFN 69 (118)
Q Consensus 12 ~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~-~d~~i~~wd~~~~~ 69 (118)
.+.++|+.+ .+.+.++... .....+.|+|+++. +.+.. .+++|.++|+.+..
T Consensus 295 ~~~ViD~~t-----~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 295 NTSSVTASV-----GQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEEEESSS-----CCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred CEEEEECCC-----CeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 445889887 5666666532 25789999999975 44554 36666666665543
No 214
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=93.51 E-value=0.16 Score=34.20 Aligned_cols=50 Identities=12% Similarity=0.103 Sum_probs=37.7
Q ss_pred eEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEee----------CCCcEEEEecCCC
Q psy1285 12 TCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNS----------KDQTIKLWDVRKF 68 (118)
Q Consensus 12 ~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~d~~i~~wd~~~~ 68 (118)
+|.+.|..+ .+.+.++..-..+ .+.++|+++.+..+. .+++|.+||..+.
T Consensus 47 ~vsvID~~t-----~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 47 ENWVSCAGC-----GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp EEEEEETTT-----TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred eEEEEECCC-----CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 788888876 6777776532334 799999999887775 3688999998763
No 215
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.32 E-value=0.88 Score=29.25 Aligned_cols=78 Identities=8% Similarity=0.048 Sum_probs=48.6
Q ss_pred ceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEE-EeeCCCcEEEEecCCCCc-------------------
Q psy1285 11 VTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLI-SNSKDQTIKLWDVRKFNG------------------- 70 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~~wd~~~~~~------------------- 70 (118)
..|+++|+.+ ++....+.. ....+..-..+++..|. ..-.++.+.++|..++..
T Consensus 65 S~v~~vD~~T-----gkv~~~~~l-~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~ 138 (262)
T 3nol_A 65 SSIRKVDIES-----GKTLQQIEL-GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQY 138 (262)
T ss_dssp EEEEEECTTT-----CCEEEEEEC-CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEEECSSC
T ss_pred ceEEEEECCC-----CcEEEEEec-CCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEecCCCE
Confidence 3889999987 566655542 22333322222344443 444588999999987654
Q ss_pred -cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 -AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 -~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
..+..+.+|.++|..+.+....+.
T Consensus 139 L~~SdGs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 139 LIMSDGTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp EEECCSSSEEEEECTTTCSEEEEEE
T ss_pred EEEECCCCeEEEEcCCCCeEEEEEE
Confidence 222235679999999888776654
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.30 E-value=0.97 Score=28.85 Aligned_cols=32 Identities=16% Similarity=0.075 Sum_probs=23.9
Q ss_pred ccCcEEEEEeCCCCCeEEEeeCC------CcEEEEecC
Q psy1285 35 HRDGITFIDPKGDSRHLISNSKD------QTIKLWDVR 66 (118)
Q Consensus 35 h~~~v~~~~~~~~~~~l~s~~~d------~~i~~wd~~ 66 (118)
.......++|+|+++.|..+... +.|.+|++.
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec
Confidence 34556789999999977666554 688888864
No 217
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.00 E-value=1 Score=28.97 Aligned_cols=78 Identities=14% Similarity=0.075 Sum_probs=49.5
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc------------------
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------------ 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------------ 70 (118)
.++.+.++|..+ .+.+.++.- ...-..+ ++++..|.....++.|.++|..++..
T Consensus 105 ~~~~v~v~D~~t-----~~~~~ti~~-~~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNE 176 (262)
T 3nol_A 105 KNGLGFVWNIRN-----LRQVRSFNY-DGEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNE 176 (262)
T ss_dssp SSSEEEEEETTT-----CCEEEEEEC-SSCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEE
T ss_pred eCCEEEEEECcc-----CcEEEEEEC-CCCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccce
Confidence 467888889877 666666652 2221333 34566666666678899999887543
Q ss_pred ---------cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 ---------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 ---------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
+..-.+..|.+-|.++++....+.
T Consensus 177 Le~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 177 LEWVDGEIFANVWQTNKIVRIDPETGKVTGIID 209 (262)
T ss_dssp EEEETTEEEEEETTSSEEEEECTTTCBEEEEEE
T ss_pred eEEECCEEEEEEccCCeEEEEECCCCcEEEEEE
Confidence 111135577777888888765543
No 218
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.96 E-value=1 Score=28.08 Aligned_cols=52 Identities=6% Similarity=-0.070 Sum_probs=33.5
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecC
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVR 66 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~ 66 (118)
++.|.+||... .............+.++++.++++..++...++.|..||..
T Consensus 35 ~~~v~~~d~~~-----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 35 ANMISCINLDG-----KITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp TTEEEEECTTC-----CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCcEEEEcCCC-----CeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 46677777652 11111122244678899999999887777667778888754
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=92.86 E-value=0.44 Score=34.40 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=26.2
Q ss_pred ccCcEEEEEeCCCCCeEEE-----eeCCCcEEEEecCCCC
Q psy1285 35 HRDGITFIDPKGDSRHLIS-----NSKDQTIKLWDVRKFN 69 (118)
Q Consensus 35 h~~~v~~~~~~~~~~~l~s-----~~~d~~i~~wd~~~~~ 69 (118)
+...+..++|||||+.++- |+.+..|+++|+.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~ 166 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ 166 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC
Confidence 4446788899999998883 3333579999998765
No 220
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.30 E-value=1.6 Score=28.64 Aligned_cols=47 Identities=6% Similarity=0.001 Sum_probs=34.2
Q ss_pred CCeEEEeeCCCcEEEEecCCCCc---------------------cceecCCcEEEEeCCCCcceeeec
Q psy1285 48 SRHLISNSKDQTIKLWDVRKFNG---------------------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 48 ~~~l~s~~~d~~i~~wd~~~~~~---------------------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
+..+..++.++.+..+|..+... ..++.++.|..+|.++++......
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~ 170 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVN 170 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEe
Confidence 45666777888888888876443 455678889999998888765443
No 221
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=91.52 E-value=1.6 Score=27.15 Aligned_cols=50 Identities=12% Similarity=-0.050 Sum_probs=32.3
Q ss_pred CceEEEEeCCCCCCCCCCce-eeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEec
Q psy1285 10 LVTCFVWDRRTLNETTAKPV-GVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDV 65 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~ 65 (118)
++.|.+||.. .... .........+..+++.++++..++...++.|..+|.
T Consensus 119 ~~~i~~~d~~------g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 119 GNRIGRITDD------GKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp TTEEEEECTT------CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CceEEEECCC------CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 4567777762 2221 112234456889999999987777666777888876
No 222
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=91.36 E-value=0.73 Score=29.35 Aligned_cols=61 Identities=8% Similarity=-0.082 Sum_probs=38.3
Q ss_pred cCceEEEEeCC--CCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC
Q psy1285 9 SLVTCFVWDRR--TLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFN 69 (118)
Q Consensus 9 ~dg~v~iwd~~--~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~ 69 (118)
.++.|.+||+. .+..........+..+.+....+++.++|++.++....+.|..||..+..
T Consensus 169 ~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 169 LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 35678888864 21100011122233344567889999999887777778889999987543
No 223
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.32 E-value=0.53 Score=34.19 Aligned_cols=55 Identities=7% Similarity=-0.048 Sum_probs=38.7
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG 70 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 70 (118)
+|.|+.||+.+ ++.+-....+ .......+...+.++..++.|+.++.||.++.+.
T Consensus 454 ~g~l~A~D~~t-----G~~~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 454 SGKLIAWDPVK-----QQAAWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp EEEEEEEETTT-----TEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ceeEEEEECCC-----CCeEeEccCC-CCccCccceECCCEEEEECCCCcEEEEECCCCcc
Confidence 58999999987 5554444322 2233334455677888899999999999998764
No 224
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.05 E-value=1.8 Score=27.93 Aligned_cols=54 Identities=7% Similarity=-0.039 Sum_probs=37.0
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 70 (118)
.++.+.++|..+ .+.+.++.- ...-..++ +++..|.....++.+.++|..++..
T Consensus 114 ~~~~v~V~D~~T-----l~~~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v 167 (268)
T 3nok_A 114 TEGLLFTWSGMP-----PQRERTTRY-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFAL 167 (268)
T ss_dssp SSCEEEEEETTT-----TEEEEEEEC-SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCE
T ss_pred cCCEEEEEECCc-----CcEEEEEeC-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeE
Confidence 478889999887 677666652 22223443 5577777666788999999887653
No 225
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=90.44 E-value=3.6 Score=29.32 Aligned_cols=38 Identities=11% Similarity=-0.015 Sum_probs=30.1
Q ss_pred CCcEEEEecCCCCc----------------------cceecCCcEEEEeCCCCcceeeec
Q psy1285 57 DQTIKLWDVRKFNG----------------------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 57 d~~i~~wd~~~~~~----------------------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
++.+.-||+.+.+. ..++.|+.++.||.++++.+.++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 56788888776543 457789999999999999988775
No 226
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=89.95 E-value=2.7 Score=29.83 Aligned_cols=38 Identities=13% Similarity=0.024 Sum_probs=28.9
Q ss_pred CCcEEEEecCCCCc----------------------cceecCCcEEEEeCCCCcceeeec
Q psy1285 57 DQTIKLWDVRKFNG----------------------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 57 d~~i~~wd~~~~~~----------------------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
++.+..||..+.+. ..++.|+.|..+|.++++.+.++.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 46777777765433 446778999999999999887765
No 227
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=89.65 E-value=2.7 Score=26.68 Aligned_cols=77 Identities=9% Similarity=-0.020 Sum_probs=48.8
Q ss_pred ceEEEEeCCCCCCCCCCceeeecCccCcEE--EEEeCCCCCeEEEeeCCCcEEEEecCCCCc------------------
Q psy1285 11 VTCFVWDRRTLNETTAKPVGVLAGHRDGIT--FIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------------ 70 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------------ 70 (118)
..|+.+|+.+ ++......-- ...+ .+++.. ++.....-.++.+.++|..++..
T Consensus 43 S~v~~vD~~t-----gkv~~~~~l~-~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~ 115 (243)
T 3mbr_X 43 SSVRKVDLET-----GRILQRAEVP-PPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALTSDDS 115 (243)
T ss_dssp CEEEEEETTT-----CCEEEEEECC-TTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEEECSS
T ss_pred ceEEEEECCC-----CCEEEEEeCC-CCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEeeCCC
Confidence 4899999987 5666555422 2222 333332 33334445688999999987553
Q ss_pred --cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 --AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 --~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
..+..+++|.++|..+.+....+.
T Consensus 116 ~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 116 HLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp CEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 223346789999999988776654
No 228
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.52 E-value=3.5 Score=27.81 Aligned_cols=51 Identities=14% Similarity=0.014 Sum_probs=31.4
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCC--cEEEEecC
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQ--TIKLWDVR 66 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~--~i~~wd~~ 66 (118)
.++.|++||... ......... ..... ++|+++++.|..+..++ .|.+++..
T Consensus 150 ~~~~I~~id~~~-----g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 150 DDPRVRLISVDD-----NKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp TTTEEEEEETTT-----TEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CCCcEEEEECCC-----CEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 346788888764 233222222 22233 88999999888877765 67776643
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=89.38 E-value=2.4 Score=27.19 Aligned_cols=56 Identities=9% Similarity=-0.048 Sum_probs=40.1
Q ss_pred EEEEEeCCCCCeEEEeeC--CCcEEEEecCCCCc-----------------------cceecCCcEEEEeCCCCcceeee
Q psy1285 39 ITFIDPKGDSRHLISNSK--DQTIKLWDVRKFNG-----------------------AANSKDQTIKLWDVRKFSNKTAQ 93 (118)
Q Consensus 39 v~~~~~~~~~~~l~s~~~--d~~i~~wd~~~~~~-----------------------~s~~~d~~i~iwd~~~~~~~~~~ 93 (118)
...+.|++++.+..+.+. ++.|.+.|+.+... ++.-.++.+.++|..+.+....+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 578999988755555443 57899999987543 33335778999999888877766
Q ss_pred c
Q psy1285 94 R 94 (118)
Q Consensus 94 ~ 94 (118)
.
T Consensus 103 ~ 103 (266)
T 2iwa_A 103 T 103 (266)
T ss_dssp E
T ss_pred E
Confidence 5
No 230
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=89.15 E-value=2.9 Score=26.48 Aligned_cols=78 Identities=18% Similarity=0.063 Sum_probs=49.8
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc------------------
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------------ 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------------ 70 (118)
.++.+.++|..+ .+.+.++.. ...-..++ +++..|.....++.|.++|..++..
T Consensus 83 ~~~~v~v~D~~t-----l~~~~ti~~-~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNe 154 (243)
T 3mbr_X 83 RNHEGFVYDLAT-----LTPRARFRY-PGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNE 154 (243)
T ss_dssp SSSEEEEEETTT-----TEEEEEEEC-SSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred eCCEEEEEECCc-----CcEEEEEeC-CCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccccee
Confidence 467888999877 677766652 22224454 4566665555688899999987643
Q ss_pred --------ccee-cCCcEEEEeCCCCcceeeec
Q psy1285 71 --------AANS-KDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 --------~s~~-~d~~i~iwd~~~~~~~~~~~ 94 (118)
.... .+..|.+-|.++++....+.
T Consensus 155 Le~~~G~lyanvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 155 LEWVNGELLANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp EEEETTEEEEEETTTTEEEEECTTTCBEEEEEE
T ss_pred eEEeCCEEEEEECCCCeEEEEECCCCCEEEEEE
Confidence 1112 34567777888887765443
No 231
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=88.64 E-value=3 Score=26.52 Aligned_cols=50 Identities=14% Similarity=0.062 Sum_probs=33.4
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecC
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVR 66 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~ 66 (118)
++.|..|+.. +. ...+..+...+..+.+.++|+++++...++.|.+|+..
T Consensus 66 ~~~i~~~~~~------g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 66 GRRVLGWRED------GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp TTEEEEEETT------SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCEEEEEeCC------CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 4667777663 22 23344456678999999999877665556778888753
No 232
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=87.77 E-value=3.4 Score=25.59 Aligned_cols=53 Identities=4% Similarity=-0.144 Sum_probs=33.1
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecC
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVR 66 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~ 66 (118)
.++.|.++|.. . ......+......+.++.+.++++..++...++.|..+|..
T Consensus 39 ~~~~v~~~~~~-~----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 39 KANKISSLDQS-G----RIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp TTTEEEEECTT-S----CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCeEEEECCC-C----ceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 34667777765 1 11111222334568899999988877776667778888755
No 233
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=87.44 E-value=6.5 Score=28.38 Aligned_cols=57 Identities=12% Similarity=0.052 Sum_probs=34.1
Q ss_pred ceEEEEeCCCCCCCCCCceeeecC-ccCcEEEEEeCCCCCeEEEee----CCCcEEEEecCCC
Q psy1285 11 VTCFVWDRRTLNETTAKPVGVLAG-HRDGITFIDPKGDSRHLISNS----KDQTIKLWDVRKF 68 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~----~d~~i~~wd~~~~ 68 (118)
..|++|++.+... ....+..... |......+.++|||++|+... .++.+.++|+.+.
T Consensus 208 ~~v~~~~lgt~~~-~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 208 HKVYFHRLGTAQE-DDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp CEEEEEETTSCGG-GCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred cEEEEEECCCCcc-cceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence 4588888765210 0112222223 445577899999999875432 2357899998654
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=87.17 E-value=3.2 Score=26.62 Aligned_cols=79 Identities=14% Similarity=0.002 Sum_probs=48.0
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc------------------
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG------------------ 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~------------------ 70 (118)
.++.+.++|..+ .+.+.++..-...-.. +++++..+..+..++.+.++|..+...
T Consensus 84 ~~~~v~viD~~t-----~~v~~~i~~g~~~g~g--lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 84 LKNIGFIYDRRT-----LSNIKNFTHQMKDGWG--LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp TCSEEEEEETTT-----TEEEEEEECCSSSCCE--EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred cCCEEEEEECCC-----CcEEEEEECCCCCeEE--EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 467888888876 5666666411122123 455676666656788999999887543
Q ss_pred ---------cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 ---------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 ---------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
+....++.|.+-|..+++....+.
T Consensus 157 le~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 157 LEYINGEVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp EEEETTEEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred EEEECCEEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 111124566667777777665554
No 235
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=87.04 E-value=3.3 Score=26.94 Aligned_cols=34 Identities=15% Similarity=0.183 Sum_probs=24.3
Q ss_pred CccCcEEEEEeCCCCCeEEEeeC-----CCcEEEEecCC
Q psy1285 34 GHRDGITFIDPKGDSRHLISNSK-----DQTIKLWDVRK 67 (118)
Q Consensus 34 ~h~~~v~~~~~~~~~~~l~s~~~-----d~~i~~wd~~~ 67 (118)
.+...+.++++.+++++.++-.. +..|.+||+.+
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t 102 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN 102 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC
Confidence 35567899999999876554332 46788888764
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=86.67 E-value=1.5 Score=31.55 Aligned_cols=54 Identities=19% Similarity=0.165 Sum_probs=36.0
Q ss_pred ceEEEEeCCCCCCCCCCc-eeeecCccCcEEEEEeCCCCCeEEE-eeCCCcEEEEecCCC
Q psy1285 11 VTCFVWDRRTLNETTAKP-VGVLAGHRDGITFIDPKGDSRHLIS-NSKDQTIKLWDVRKF 68 (118)
Q Consensus 11 g~v~iwd~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s-~~~d~~i~~wd~~~~ 68 (118)
+.|.+.|.++.. ... +..+. -.....++.++|||+++.. +..+.+|.++|+.+.
T Consensus 254 ~~V~VID~~~~~---~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 254 NGVKVVDGRKEA---SSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp TTEEEEECSGGG---CCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred CcEEEEeCcccC---CceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 347888887510 122 33443 2335678999999998765 456889999999854
No 237
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.65 E-value=4.9 Score=26.21 Aligned_cols=78 Identities=8% Similarity=-0.037 Sum_probs=47.4
Q ss_pred ccCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc-----------------
Q psy1285 8 ASLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG----------------- 70 (118)
Q Consensus 8 ~~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~----------------- 70 (118)
+.++.+..+|... ++..-... ......+.. ++..+..++.++.+..+|..+...
T Consensus 246 ~~~g~l~~~d~~t-----G~~~w~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~ 316 (376)
T 3q7m_A 246 AYNGNLTALDLRS-----GQIMWKRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL 316 (376)
T ss_dssp CTTSCEEEEETTT-----CCEEEEEC--CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE
T ss_pred ecCcEEEEEECCC-----CcEEeecc--CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE
Confidence 3467777777765 34332222 122233332 245666666777777777765332
Q ss_pred -----cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 -----AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 -----~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
..++.++.|..+|.++++......
T Consensus 317 ~~~~l~v~~~~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 317 YNGNLVVGDSEGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 456678899999999988776554
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=86.63 E-value=1.2 Score=32.30 Aligned_cols=55 Identities=9% Similarity=0.060 Sum_probs=38.9
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG 70 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 70 (118)
.|.|..||+.+ ++.+-... +...+....+...+..+..++.|+.+++||.++...
T Consensus 456 ~g~l~A~D~~t-----G~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 456 FGRLLAWDPVA-----QKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEEETTT-----TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccEEEEEeCCC-----CcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 38999999987 55443333 333344444555677888889999999999998654
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=86.32 E-value=3.1 Score=30.09 Aligned_cols=38 Identities=11% Similarity=0.094 Sum_probs=29.6
Q ss_pred CCcEEEEecCCCCc----------------------cceecCCcEEEEeCCCCcceeeec
Q psy1285 57 DQTIKLWDVRKFNG----------------------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 57 d~~i~~wd~~~~~~----------------------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
++.+..||..+.+. ..++.|+.++.||.++++.+..+.
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEec
Confidence 47788888876433 556789999999999999887665
No 240
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=85.91 E-value=5.2 Score=25.79 Aligned_cols=70 Identities=9% Similarity=-0.092 Sum_probs=43.6
Q ss_pred cCcEEEEEeCCCCCeEEE-eeCCCcEEEEecC--CC-C--------------c--------------cceecCCcEEEEe
Q psy1285 36 RDGITFIDPKGDSRHLIS-NSKDQTIKLWDVR--KF-N--------------G--------------AANSKDQTIKLWD 83 (118)
Q Consensus 36 ~~~v~~~~~~~~~~~l~s-~~~d~~i~~wd~~--~~-~--------------~--------------~s~~~d~~i~iwd 83 (118)
......++|+|+++.+.. ...++.|.+||+. +. . . ++...++.|..||
T Consensus 178 ~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 178 ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred CcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEEC
Confidence 345678999999987654 4457889999874 32 1 0 2222356788888
Q ss_pred CCCCcceeeecccCcceeeEeee
Q psy1285 84 VRKFSNKTAQRNTFRAVCEQNWE 106 (118)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~~ 106 (118)
. .++....+......+..+.|+
T Consensus 258 ~-~g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 258 T-DGNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp T-TCCEEEEEECSCSBEEEEEEE
T ss_pred C-CCCEEEEEECCCCCcEEEEEe
Confidence 8 455444444344456677765
No 241
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=85.48 E-value=5.6 Score=25.80 Aligned_cols=26 Identities=12% Similarity=0.100 Sum_probs=18.6
Q ss_pred cEEEEEeCCCCCeEEEeeCCC-cEEEE
Q psy1285 38 GITFIDPKGDSRHLISNSKDQ-TIKLW 63 (118)
Q Consensus 38 ~v~~~~~~~~~~~l~s~~~d~-~i~~w 63 (118)
.+..++++|+++.|..+..++ .+..+
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred ccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 368899999998887776555 34333
No 242
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=84.92 E-value=5.1 Score=24.79 Aligned_cols=52 Identities=8% Similarity=-0.114 Sum_probs=32.1
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecC
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVR 66 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~ 66 (118)
++.|..+|... ......+......+.++++.++++..++...++.|..+|..
T Consensus 82 ~~~v~~~d~~g-----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 82 ANKIGKLSKKG-----GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp TTEEEEECTTS-----CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred CCeEEEECCCC-----CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC
Confidence 45666666552 11111222234568899999988887776667777777654
No 243
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=84.15 E-value=7.6 Score=26.15 Aligned_cols=32 Identities=13% Similarity=0.079 Sum_probs=25.4
Q ss_pred CcEEEEEeCCCCCeEEEee-CCCcEEEEecCCC
Q psy1285 37 DGITFIDPKGDSRHLISNS-KDQTIKLWDVRKF 68 (118)
Q Consensus 37 ~~v~~~~~~~~~~~l~s~~-~d~~i~~wd~~~~ 68 (118)
.....+++++++++.++-. .++.|+.|++.+.
T Consensus 323 ~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 323 AQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp SSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred CCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 3478899999999777777 7889999986543
No 244
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=82.62 E-value=7.6 Score=25.02 Aligned_cols=57 Identities=9% Similarity=-0.042 Sum_probs=35.3
Q ss_pred CceEEEEeCC--CC-CCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecC
Q psy1285 10 LVTCFVWDRR--TL-NETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVR 66 (118)
Q Consensus 10 dg~v~iwd~~--~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~ 66 (118)
++.|.+||+. .+ ..........+.........+.+.++|++.++...++.|..||..
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 5678888875 21 110111122233334556789999999877776667889999874
No 245
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=82.41 E-value=10 Score=26.47 Aligned_cols=61 Identities=15% Similarity=0.117 Sum_probs=36.2
Q ss_pred cccCceEEEEeCCCCCCCCCCceeeec------Cc-cCcEEEEEeCCCCCeEEEeeCC------CcEEEEecCCCC
Q psy1285 7 VASLVTCFVWDRRTLNETTAKPVGVLA------GH-RDGITFIDPKGDSRHLISNSKD------QTIKLWDVRKFN 69 (118)
Q Consensus 7 ~~~dg~v~iwd~~~~~~~~~~~~~~~~------~h-~~~v~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~ 69 (118)
.-.++.|.++|+.+-. ...+...+++ .. ......+...|+| .++++..+ +.+.+.|..++.
T Consensus 102 ~l~s~~I~viD~~t~p-~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~ 175 (462)
T 2ece_A 102 GLRSSRIYIIDTKPNP-REPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE 175 (462)
T ss_dssp BTTTCCEEEEECCSCT-TSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC
T ss_pred cCCCCeEEEEECCCCC-CCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe
Confidence 3446789999986411 1134444442 01 1234567778999 66665544 679999987644
No 246
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=82.38 E-value=10 Score=26.41 Aligned_cols=54 Identities=11% Similarity=-0.105 Sum_probs=33.3
Q ss_pred cccCceEEEEeCCCCCCCCCCceeeecCc----cCcEEEEEeCCCCCeEEEeeCCCcEEEEecC
Q psy1285 7 VASLVTCFVWDRRTLNETTAKPVGVLAGH----RDGITFIDPKGDSRHLISNSKDQTIKLWDVR 66 (118)
Q Consensus 7 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~ 66 (118)
.+.++.||.-++... ..-+.++.- -+.+..+..+|+|++||..+. ..|.|-.+.
T Consensus 37 ~a~~n~iR~~~i~~~-----~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP 94 (452)
T 3pbp_A 37 FIQDNIIRWYNVLTD-----SLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVP 94 (452)
T ss_dssp EEETTEEEEEETTTC-----SSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECC
T ss_pred EEECCEEEEEECCCC-----CcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEec
Confidence 455678887777641 122333321 225778999999999987653 356665555
No 247
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=81.21 E-value=3 Score=28.98 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=27.8
Q ss_pred cCcEEEEEeCC---CCCeEEEeeCCCcEEEEecCC
Q psy1285 36 RDGITFIDPKG---DSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 36 ~~~v~~~~~~~---~~~~l~s~~~d~~i~~wd~~~ 67 (118)
..+|..+.|+| .+.+|++-..|+.|++||+..
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 46799999998 466899989999999999986
No 248
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.60 E-value=3.5 Score=31.27 Aligned_cols=33 Identities=18% Similarity=0.044 Sum_probs=26.7
Q ss_pred cEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc
Q psy1285 38 GITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG 70 (118)
Q Consensus 38 ~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 70 (118)
.+.++...++..++.+-+.|+++|+|++.+...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCe
Confidence 456666777788999999999999999887543
No 249
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=78.86 E-value=16 Score=26.29 Aligned_cols=24 Identities=13% Similarity=-0.133 Sum_probs=20.0
Q ss_pred cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 ~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
..++.|+.|+.||.++++.+.++.
T Consensus 488 f~gt~dg~l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 488 FYGTLDGYLKARDSDTGDLLWKFK 511 (599)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEECCCCeEEEEECCCCCEEEEee
Confidence 446789999999999999887765
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=75.52 E-value=4.8 Score=29.09 Aligned_cols=56 Identities=7% Similarity=-0.002 Sum_probs=36.7
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 70 (118)
.+|.|..||+.+ ++..=... +........+...+.++..++.|+.++.||.++...
T Consensus 436 ~~g~l~A~D~~t-----G~~~W~~~-~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 436 VSGALLAWDPVK-----QKAAWKVP-YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CEEEEEEEETTT-----TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccceEEEEeCCC-----CcEEEEcc-CCCCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 458999999987 45443332 122222223333567888889999999999987653
No 251
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=68.34 E-value=30 Score=24.79 Aligned_cols=53 Identities=17% Similarity=0.177 Sum_probs=32.7
Q ss_pred eEEEEeCCCCCCCCCCceeeec-CccCcEEEEEeCCCCCeEEEeeC-CCcEEEEecCC
Q psy1285 12 TCFVWDRRTLNETTAKPVGVLA-GHRDGITFIDPKGDSRHLISNSK-DQTIKLWDVRK 67 (118)
Q Consensus 12 ~v~iwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~-d~~i~~wd~~~ 67 (118)
.+.+||..+.. -..+..+. .+.....++++..+++.++.|+. +..+.+||..+
T Consensus 220 ~~~~yd~~t~~---w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t 274 (656)
T 1k3i_A 220 LTSSWDPSTGI---VSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSS 274 (656)
T ss_dssp EEEEECTTTCC---BCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGG
T ss_pred EEEEEeCCCCc---EEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcC
Confidence 56777876521 22222222 23333445777888999999885 45799999764
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=67.56 E-value=9.7 Score=27.01 Aligned_cols=56 Identities=11% Similarity=-0.130 Sum_probs=34.9
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 70 (118)
.+|.|..||+.+ ++..-.+. +...+....+...+..+..++.|+.+..+|.++.+.
T Consensus 442 ~~g~l~a~D~~t-----G~~~W~~~-~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 442 EMGQIRAFDLTT-----GKAKWTKW-EKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp CCEEEEEECTTT-----CCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CCCeEEEEECCC-----CCEEEEec-CCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 468999999986 45443332 222222222222355667788999999999987654
No 253
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=65.39 E-value=29 Score=24.29 Aligned_cols=49 Identities=18% Similarity=0.088 Sum_probs=31.2
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecC--ccCcEEEEEe--CCCCCeEEEee------CCCcEEE
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAG--HRDGITFIDP--KGDSRHLISNS------KDQTIKL 62 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~--h~~~v~~~~~--~~~~~~l~s~~------~d~~i~~ 62 (118)
.+.+|.+||+.. .+...++.. .......+.| +|+++++..+. .+++|.+
T Consensus 226 ~~d~V~v~D~~~-----~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v 284 (462)
T 2ece_A 226 YGNRIHFWDLRK-----RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWL 284 (462)
T ss_dssp SCCEEEEEETTT-----TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEE
T ss_pred cCCEEEEEECCC-----CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEE
Confidence 468999999986 455555542 1123445555 99998876655 3456643
No 254
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=63.03 E-value=24 Score=21.71 Aligned_cols=58 Identities=7% Similarity=-0.070 Sum_probs=37.5
Q ss_pred CcEEEEEeCCCCCeE-EEeeCCCcEEEEecCCCCc---------------------cceecCCcEEEEeCCCCcceeeec
Q psy1285 37 DGITFIDPKGDSRHL-ISNSKDQTIKLWDVRKFNG---------------------AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 37 ~~v~~~~~~~~~~~l-~s~~~d~~i~~wd~~~~~~---------------------~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
.....+++++++..| .+-...+.|..+|...... ++....+.|..+|..+++....+.
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred CCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 457789999976655 4445567888888753211 222234678888887777666654
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=61.80 E-value=13 Score=26.44 Aligned_cols=56 Identities=11% Similarity=-0.063 Sum_probs=34.1
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 70 (118)
.+|.|..||+.+ ++.+=.... ...+..-.....+.++..++.|+.++.+|.++.+.
T Consensus 464 ~~G~l~A~D~~t-----G~~~W~~~~-~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 464 HVGSLRAMDPVS-----GKVVWEHKE-HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE 519 (582)
T ss_dssp CSEEEEEECTTT-----CCEEEEEEE-SSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CcceEEEEECCC-----CCEEEEecC-CCCCcccceEeCCCEEEEECCCCcEEEEECCCCCE
Confidence 368899999987 444322221 11111111111356777789999999999988764
No 256
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=61.26 E-value=27 Score=21.84 Aligned_cols=50 Identities=6% Similarity=-0.117 Sum_probs=24.9
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecC
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVR 66 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~ 66 (118)
++.+..+|.. + ............+.++...+++. +..++.++.+..+|..
T Consensus 116 ~~~l~~~d~~-g-----~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 116 DGHLYAINTD-G-----TEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD 165 (330)
T ss_dssp TSEEEEECTT-S-----CEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT
T ss_pred CCEEEEEcCC-C-----CEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC
Confidence 5566666654 1 22222222233344445555555 4445566777777765
No 257
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=60.60 E-value=5.7 Score=30.75 Aligned_cols=31 Identities=16% Similarity=0.015 Sum_probs=23.4
Q ss_pred EEEEeCCCCCeEEEeeCCCcEEEEecCCCCc
Q psy1285 40 TFIDPKGDSRHLISNSKDQTIKLWDVRKFNG 70 (118)
Q Consensus 40 ~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 70 (118)
.++...++..++.+-+.|+++|+|++.+..+
T Consensus 241 vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp SCCEEETTTTEEEEEBTTCEEEEEETTTTEE
T ss_pred EEeeccCCccEEEEEeCCCEEEEEECCCCCe
Confidence 3444455677888999999999999987643
No 258
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=59.01 E-value=28 Score=21.33 Aligned_cols=59 Identities=5% Similarity=-0.139 Sum_probs=32.2
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeE-EEeeCCCcEEEEecCC
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHL-ISNSKDQTIKLWDVRK 67 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~i~~wd~~~ 67 (118)
..+.|+.+++.............+......+.++++.+++..| .+-..++.|..++...
T Consensus 8 ~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g 67 (267)
T 1npe_A 8 QTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHG 67 (267)
T ss_dssp EEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSS
T ss_pred cCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCC
Confidence 3457777887652110001111122223456789998865544 4445567888888754
No 259
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=57.90 E-value=17 Score=27.00 Aligned_cols=30 Identities=27% Similarity=0.426 Sum_probs=22.9
Q ss_pred cEEEEEeCCCCCeEEEeeCCCcEEEEecCCCC
Q psy1285 38 GITFIDPKGDSRHLISNSKDQTIKLWDVRKFN 69 (118)
Q Consensus 38 ~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~ 69 (118)
.|.++.+. ..++.+-+.|+++|+|++.+..
T Consensus 223 ~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLFH--ERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEET--TTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEeccC--CcEEEEEEcCCeEEEEEcCCCc
Confidence 35555443 6788999999999999998765
No 260
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=57.48 E-value=28 Score=26.51 Aligned_cols=22 Identities=18% Similarity=0.111 Sum_probs=18.6
Q ss_pred cceecCCcEEEEeCCCCcceee
Q psy1285 71 AANSKDQTIKLWDVRKFSNKTA 92 (118)
Q Consensus 71 ~s~~~d~~i~iwd~~~~~~~~~ 92 (118)
.+-+.|+++|+|++.++.....
T Consensus 251 ftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 251 VMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp EEEETTCEEEEEETTTTEEEEE
T ss_pred EEEECCCEEEEEECCCCCeEee
Confidence 5678999999999999887654
No 261
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=57.38 E-value=33 Score=21.48 Aligned_cols=27 Identities=15% Similarity=-0.053 Sum_probs=14.0
Q ss_pred CcEEEEEeCCCCCeEEEeeCCCcEEEEe
Q psy1285 37 DGITFIDPKGDSRHLISNSKDQTIKLWD 64 (118)
Q Consensus 37 ~~v~~~~~~~~~~~l~s~~~d~~i~~wd 64 (118)
..+.++...+++... .++.++.+..+|
T Consensus 215 ~~~~~~~~~~~g~l~-v~t~~~gl~~~~ 241 (330)
T 3hxj_A 215 WTVTRPAISEDGTIY-VTSLDGHLYAIN 241 (330)
T ss_dssp CCCSCCEECTTSCEE-EEETTTEEEEEC
T ss_pred cceeceEECCCCeEE-EEcCCCeEEEEC
Confidence 445566666655443 344455555554
No 262
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=56.42 E-value=22 Score=27.59 Aligned_cols=22 Identities=18% Similarity=0.111 Sum_probs=18.7
Q ss_pred cceecCCcEEEEeCCCCcceee
Q psy1285 71 AANSKDQTIKLWDVRKFSNKTA 92 (118)
Q Consensus 71 ~s~~~d~~i~iwd~~~~~~~~~ 92 (118)
.+-+.|+++|||++.++.++..
T Consensus 253 ftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 253 VMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp EEEBTTCEEEEEETTTTEEEEE
T ss_pred EEEeCCCEEEEEECCCCCeEEe
Confidence 5678999999999999987654
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=55.91 E-value=36 Score=21.58 Aligned_cols=30 Identities=10% Similarity=-0.048 Sum_probs=21.6
Q ss_pred cEEEEEeCCCCCeEEEe-eCCCcEEEEecCC
Q psy1285 38 GITFIDPKGDSRHLISN-SKDQTIKLWDVRK 67 (118)
Q Consensus 38 ~v~~~~~~~~~~~l~s~-~~d~~i~~wd~~~ 67 (118)
....++++++++.|..+ ..++.|..+++..
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 45678999998865444 5567888888763
No 264
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=49.83 E-value=57 Score=22.08 Aligned_cols=29 Identities=14% Similarity=-0.119 Sum_probs=21.3
Q ss_pred cEEEEEeCCCCCeE-EEeeCCCcEEEEecC
Q psy1285 38 GITFIDPKGDSRHL-ISNSKDQTIKLWDVR 66 (118)
Q Consensus 38 ~v~~~~~~~~~~~l-~s~~~d~~i~~wd~~ 66 (118)
....++|+|++++| ++-...+.|..++..
T Consensus 271 ~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 271 WEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 46789999999954 454567788887754
No 265
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=48.69 E-value=76 Score=23.18 Aligned_cols=30 Identities=23% Similarity=-0.055 Sum_probs=19.8
Q ss_pred CcEEEEEeCCCCC-eEEEeeCCCcEEEEecC
Q psy1285 37 DGITFIDPKGDSR-HLISNSKDQTIKLWDVR 66 (118)
Q Consensus 37 ~~v~~~~~~~~~~-~l~s~~~d~~i~~wd~~ 66 (118)
.....|+++|++. +..+-...+.|..+++.
T Consensus 540 ~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred CCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 3456789998654 44454556778888774
No 266
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=44.99 E-value=42 Score=24.09 Aligned_cols=56 Identities=11% Similarity=-0.134 Sum_probs=33.3
Q ss_pred cCceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCCCCc
Q psy1285 9 SLVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRKFNG 70 (118)
Q Consensus 9 ~dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 70 (118)
.+|.+..||+.+ ++.+=... +......-.....+..+..++.|+.++.+|.++.+.
T Consensus 451 ~~G~l~A~D~~t-----G~~~W~~~-~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 451 GLGQIKAYNAIT-----GDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDL 506 (599)
T ss_dssp CCEEEEEECTTT-----CCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CcCeEEEEECCC-----CCEEeEec-CCCCccCcceEecCCEEEEECCCCeEEEEECCCCCE
Confidence 458899999987 44432222 111111111112355667788999999999988654
No 267
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=44.47 E-value=52 Score=23.85 Aligned_cols=58 Identities=16% Similarity=0.106 Sum_probs=36.5
Q ss_pred cCceEEEEeCCCCC------C-CCCCceeeecCccCcEEEEEeCCCCCeEEEeeCCCcEEEEecCC
Q psy1285 9 SLVTCFVWDRRTLN------E-TTAKPVGVLAGHRDGITFIDPKGDSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 9 ~dg~v~iwd~~~~~------~-~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 67 (118)
.+.+|.++|+.+.. . .......+.. -......++|+++|....+.-.|+.|..||+..
T Consensus 297 ~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 297 LSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp TSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 45678888887520 0 0001222222 234578899999995455667799999999865
No 268
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=44.12 E-value=17 Score=27.01 Aligned_cols=24 Identities=17% Similarity=0.408 Sum_probs=19.6
Q ss_pred cceecCCcEEEEeCCCCcceeeec
Q psy1285 71 AANSKDQTIKLWDVRKFSNKTAQR 94 (118)
Q Consensus 71 ~s~~~d~~i~iwd~~~~~~~~~~~ 94 (118)
.+-+.|+++|+|+++++.......
T Consensus 235 ftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 235 IVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCeEEEEEcCCCceEEeec
Confidence 567889999999999998765443
No 269
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=39.40 E-value=1.4e+02 Score=23.61 Aligned_cols=35 Identities=11% Similarity=0.086 Sum_probs=27.3
Q ss_pred ccCcEEEEEeCCC------CCeEEEeeC-CCcEEEEecCCCC
Q psy1285 35 HRDGITFIDPKGD------SRHLISNSK-DQTIKLWDVRKFN 69 (118)
Q Consensus 35 h~~~v~~~~~~~~------~~~l~s~~~-d~~i~~wd~~~~~ 69 (118)
-.+.|.|+++.+. ...++.|.. |++++++++....
T Consensus 552 l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 552 MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC
T ss_pred CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC
Confidence 3567999998753 367888886 9999999987654
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=36.00 E-value=43 Score=24.54 Aligned_cols=31 Identities=10% Similarity=0.122 Sum_probs=23.1
Q ss_pred cEEEEEeC-CCCCeEEEeeC-C----CcEEEEecCCC
Q psy1285 38 GITFIDPK-GDSRHLISNSK-D----QTIKLWDVRKF 68 (118)
Q Consensus 38 ~v~~~~~~-~~~~~l~s~~~-d----~~i~~wd~~~~ 68 (118)
.+...+|| |||+.++-... + ..|.++|+.+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g 211 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDP 211 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCC
Confidence 56788999 99998874432 2 25999998876
No 271
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=35.16 E-value=1e+02 Score=20.87 Aligned_cols=85 Identities=13% Similarity=0.136 Sum_probs=50.4
Q ss_pred CceEEEEeCCCCCCCCCCceeeecCccCcEEEEEeCC--CC-CeEEEeeCC---CcEEEEecCCCC-c------------
Q psy1285 10 LVTCFVWDRRTLNETTAKPVGVLAGHRDGITFIDPKG--DS-RHLISNSKD---QTIKLWDVRKFN-G------------ 70 (118)
Q Consensus 10 dg~v~iwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~-~~l~s~~~d---~~i~~wd~~~~~-~------------ 70 (118)
.|.+++|.... ...+.+++|-.....+.... .. ..++.+... +++.+-++.... .
T Consensus 179 ~G~mQLYS~er------~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~ 252 (365)
T 2xzh_A 179 VGAMQLYSVDR------KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVF 252 (365)
T ss_dssp EEEEEEEETTT------TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEEC
T ss_pred ceeEEEEeecc------cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceee
Confidence 47888998874 55566788876554444432 11 233333221 467777764321 1
Q ss_pred ----------------------cceecCCcEEEEeCCCCcceeeecccCcce
Q psy1285 71 ----------------------AANSKDQTIKLWDVRKFSNKTAQRNTFRAV 100 (118)
Q Consensus 71 ----------------------~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v 100 (118)
..-..-|.|.+||+.++.++..-....+.+
T Consensus 253 fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~i 304 (365)
T 2xzh_A 253 FPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETI 304 (365)
T ss_dssp CCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred CCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCce
Confidence 234667899999999999886544333333
No 272
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=34.82 E-value=1e+02 Score=20.58 Aligned_cols=32 Identities=13% Similarity=0.065 Sum_probs=24.1
Q ss_pred cCcEEEEEeCCCCCeEEEe-eCCCcEEEEecCC
Q psy1285 36 RDGITFIDPKGDSRHLISN-SKDQTIKLWDVRK 67 (118)
Q Consensus 36 ~~~v~~~~~~~~~~~l~s~-~~d~~i~~wd~~~ 67 (118)
-...+.++|+||++.|..+ +..+.|..|++..
T Consensus 220 l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 220 FDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 3457899999999876554 4567888888763
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=34.39 E-value=1.4e+02 Score=21.95 Aligned_cols=31 Identities=26% Similarity=0.306 Sum_probs=21.5
Q ss_pred CcEEEEEeCCCCCeEEEeeC---CCcEEEEecCC
Q psy1285 37 DGITFIDPKGDSRHLISNSK---DQTIKLWDVRK 67 (118)
Q Consensus 37 ~~v~~~~~~~~~~~l~s~~~---d~~i~~wd~~~ 67 (118)
.....+.|+|||++|+..+. ...+.++|+.+
T Consensus 271 ~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 271 LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp TCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred ceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 44567889999998875542 34577777754
No 274
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=33.49 E-value=9.6 Score=26.59 Aligned_cols=19 Identities=21% Similarity=0.583 Sum_probs=11.6
Q ss_pred eecCCcEEEEeCCCCccee
Q psy1285 73 NSKDQTIKLWDVRKFSNKT 91 (118)
Q Consensus 73 ~~~d~~i~iwd~~~~~~~~ 91 (118)
+..+|-|++||++..+...
T Consensus 163 ~~~~GVVrvWDVkd~slLn 181 (577)
T 3mwp_A 163 AGRDGVVRVWDVKNAELLN 181 (577)
T ss_dssp ---CCEECSEECSCGGGGT
T ss_pred CCCCCeEEEEecCCHHHHh
Confidence 3456778888887776643
No 275
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=29.12 E-value=1.3e+02 Score=20.02 Aligned_cols=32 Identities=19% Similarity=0.155 Sum_probs=24.9
Q ss_pred ccCcEEEEEeCCCCCeEEEeeCCCcEEEEecC
Q psy1285 35 HRDGITFIDPKGDSRHLISNSKDQTIKLWDVR 66 (118)
Q Consensus 35 h~~~v~~~~~~~~~~~l~s~~~d~~i~~wd~~ 66 (118)
-......++|.|+|+++++-...|.|.+++..
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~ 61 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAK 61 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECC
Confidence 34567899999999988776558888888754
No 276
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=27.89 E-value=1.3e+02 Score=19.66 Aligned_cols=29 Identities=17% Similarity=0.226 Sum_probs=21.6
Q ss_pred cCcEEEEEeCCCCC-eEEEeeCCCcEEEEec
Q psy1285 36 RDGITFIDPKGDSR-HLISNSKDQTIKLWDV 65 (118)
Q Consensus 36 ~~~v~~~~~~~~~~-~l~s~~~d~~i~~wd~ 65 (118)
......++|.|+++ +++ +...+.|.+++.
T Consensus 17 l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~ 46 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLI-TLRGGELRHWQA 46 (353)
T ss_dssp ESSEEEEEECSTTCCEEE-EETTTEEEEEET
T ss_pred CCCcEEEEEcCCCCEEEE-EeCCceEEEEeC
Confidence 44568899999998 554 456788888874
No 277
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=26.74 E-value=92 Score=18.97 Aligned_cols=30 Identities=13% Similarity=0.177 Sum_probs=14.5
Q ss_pred cEEEEEeCCCCCe-EEEeeCCCcEEEEecCC
Q psy1285 38 GITFIDPKGDSRH-LISNSKDQTIKLWDVRK 67 (118)
Q Consensus 38 ~v~~~~~~~~~~~-l~s~~~d~~i~~wd~~~ 67 (118)
-+.++.|...+.+ +++...++++.+||..-
T Consensus 120 hllsl~f~~g~aHaia~S~~g~~~tlFDPN~ 150 (188)
T 1ukf_A 120 HLLSLRFANVQGHAIACSCEGSQFKLFDPNL 150 (188)
T ss_dssp EEEEEEETTTEEEEEEEEEETTEEEEEETTT
T ss_pred eEEEEEecCCCceeEEeccCCCeEEEeCCCC
Confidence 3555666654333 33333455555555543
No 278
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=25.27 E-value=1.3e+02 Score=18.84 Aligned_cols=32 Identities=0% Similarity=-0.069 Sum_probs=19.7
Q ss_pred cCcEEEEEeCCCCCeEEEeeCC-C-cEEEEecCC
Q psy1285 36 RDGITFIDPKGDSRHLISNSKD-Q-TIKLWDVRK 67 (118)
Q Consensus 36 ~~~v~~~~~~~~~~~l~s~~~d-~-~i~~wd~~~ 67 (118)
.+....+++.++++.+++.... + .+..+|..+
T Consensus 71 ~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 71 EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCC
Confidence 3467889999999866554332 2 355555443
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=21.33 E-value=1.9e+02 Score=19.26 Aligned_cols=31 Identities=26% Similarity=-0.055 Sum_probs=20.6
Q ss_pred CcEEEEEeCCCCCeEEEe-eCCCcEEEEecCC
Q psy1285 37 DGITFIDPKGDSRHLISN-SKDQTIKLWDVRK 67 (118)
Q Consensus 37 ~~v~~~~~~~~~~~l~s~-~~d~~i~~wd~~~ 67 (118)
.....|++.+++..|..+ ...+.|..+|+..
T Consensus 246 ~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 246 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 456889999866555444 4456787777653
No 280
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=20.86 E-value=1.9e+02 Score=19.22 Aligned_cols=29 Identities=24% Similarity=0.247 Sum_probs=23.8
Q ss_pred EEEEEeCCCCCeEEEeeCCCcEEEEecCC
Q psy1285 39 ITFIDPKGDSRHLISNSKDQTIKLWDVRK 67 (118)
Q Consensus 39 v~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 67 (118)
...++++|++..|+.....+.+.-+|+..
T Consensus 187 ~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 187 YSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred cceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 56899999998887776689999999654
Done!