BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12851
(148 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 208 bits (530), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 100/148 (67%), Positives = 123/148 (83%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK G+I A ELRHVMT LGE+L+++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+EADI+GDG++NYE+FVT+MTS
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTS 148
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 77 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+T+M K
Sbjct: 134 DGQVNYEEFVTMMTSK 149
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 122/148 (82%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 63
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++
Sbjct: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 123
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 124 EVDEMIREADIDGDGQVNYEEFVQMMTA 151
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 80 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 137 DGQVNYEEFVQMMTAK 152
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 122/148 (82%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 77 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 134 DGQVNYEEFVQMMTAK 149
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 123/148 (83%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK G+I A ELRHVMT LGE+L+++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+E+DI+GDG++NYE+FVT+MTS
Sbjct: 121 EVDEMIRESDIDGDGQVNYEEFVTMMTS 148
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 77 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDG 133
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+T+M K
Sbjct: 134 DGQVNYEEFVTMMTSK 149
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 122/148 (82%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 121
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 122 EVDEMIREADIDGDGQVNYEEFVQMMTA 149
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 78 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 134
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 135 DGQVNYEEFVQMMTAK 150
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 123/148 (83%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK G+I A ELRHVMT LGE+L+++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+EADI+GDG++NYE+FVT+MT+
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTT 148
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 77 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+T+M K
Sbjct: 134 DGQVNYEEFVTMMTTK 149
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 207 bits (526), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 122/148 (82%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 77 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 134 DGQVNYEEFVQMMTAK 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 207 bits (526), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 122/148 (82%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 77 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 61 RGTIDFPEFLTVMARKL 77
G +++ EF+ +M KL
Sbjct: 134 DGQVNYEEFVQMMTAKL 150
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 207 bits (526), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 122/148 (82%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 77 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 134 DGQVNYEEFVQMMTAK 149
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 206 bits (525), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/147 (67%), Positives = 122/147 (82%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK G+I A ELRHVMT LGE+L+++E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EADI+GDG++NYE+FVT+MTS
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMTS 147
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 76 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 132
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+T+M K
Sbjct: 133 DGQVNYEEFVTMMTSK 148
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 206 bits (523), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 98/148 (66%), Positives = 122/148 (82%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV++MI+EADI+GDG++NYE+FV +MT+
Sbjct: 121 EVDQMIREADIDGDGQVNYEEFVQMMTA 148
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ +IRE D++
Sbjct: 77 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDG 133
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 134 DGQVNYEEFVQMMTAK 149
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 205 bits (521), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 122/147 (82%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK G+I A ELRHVMT LGE+L+++E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EADI+GDG++NYE+FVT+MT+
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMTA 147
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 76 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 132
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+T+M K
Sbjct: 133 DGQVNYEEFVTMMTAK 148
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 205 bits (521), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 121/147 (82%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++E
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 126
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 127 VDEMIREADIDGDGQVNYEEFVQMMTA 153
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 82 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 138
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 139 DGQVNYEEFVQMMTAK 154
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 205 bits (521), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 121/147 (82%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 76 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 132
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 133 DGQVNYEEFVQMMTAK 148
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 205 bits (521), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 121/147 (82%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 204 bits (520), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 121/147 (82%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 76 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 132
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 133 DGQVNYEEFVQMMTAK 148
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 203 bits (517), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 120/147 (81%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE L+++E
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 121
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 77 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDG 133
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 134 DGQVNYEEFVQMMTAK 149
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 203 bits (517), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 120/147 (81%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE L+++E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 76 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDG 132
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 133 DGQVNYEEFVQMMTAK 148
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 203 bits (516), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/147 (65%), Positives = 121/147 (82%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++E
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EA+I+GDG++NYE+FV +MT+
Sbjct: 121 VDEMIREANIDGDGQVNYEEFVQMMTA 147
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE +++
Sbjct: 76 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDG 132
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 133 DGQVNYEEFVQMMTAK 148
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 202 bits (513), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 99/147 (67%), Positives = 122/147 (82%), Gaps = 2/147 (1%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK G+I A ELRHVMT LGE+L+++E
Sbjct: 61 GTIDFPEFLTMMARKM--KDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 118
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EADI+GDG++NYE+FVT+MTS
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVTMMTS 145
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
+EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++ G ++
Sbjct: 79 SEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 135
Query: 66 FPEFLTVMARK 76
+ EF+T+M K
Sbjct: 136 YEEFVTMMTSK 146
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 202 bits (513), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 97/145 (66%), Positives = 119/145 (82%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV
Sbjct: 61 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 120
Query: 123 NEMIQEADINGDGRINYEDFVTLMT 147
+EMI+EADI+GDG++NYE+FV +MT
Sbjct: 121 DEMIREADIDGDGQVNYEEFVQMMT 145
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 201 bits (511), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 120/146 (82%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 423
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 424 DEMIREADIDGDGQVNYEEFVQMMTA 449
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 378 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 434
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 435 DGQVNYEEFVQMMTAK 450
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 201 bits (511), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/148 (65%), Positives = 121/148 (81%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+ DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
+EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++ G ++
Sbjct: 381 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 437
Query: 66 FPEFLTVMARK 76
+ EF+ +M K
Sbjct: 438 YEEFVQMMTAK 448
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 201 bits (511), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 120/146 (82%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
+EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++ G ++
Sbjct: 382 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 438
Query: 66 FPEFLTVMARK 76
+ EF+ +M K
Sbjct: 439 YEEFVQMMTAK 449
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 201 bits (511), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/148 (65%), Positives = 121/148 (81%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+ DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
+EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++ G ++
Sbjct: 381 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 437
Query: 66 FPEFLTVMARK 76
+ EF+ +M K
Sbjct: 438 YEEFVQMMTAK 448
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 201 bits (511), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 120/146 (82%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 377 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 433
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 434 DGQVNYEEFVQMMTAK 449
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 201 bits (511), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 120/146 (82%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 377 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 433
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 434 DGQVNYEEFVQMMTAK 449
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 201 bits (510), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/145 (66%), Positives = 119/145 (82%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
QLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + GT
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 64 IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVN 123
IDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV+
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 124 EMIQEADINGDGRINYEDFVTLMTS 148
EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMMTA 145
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 74 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 130
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 131 DGQVNYEEFVQMMTAK 146
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 120/146 (82%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 422 DEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 376 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 432
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 433 DGQVNYEEFVQMMTAK 448
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 120/146 (82%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 385
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 386 DEMIREADIDGDGQVNYEEFVQMMTA 411
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 120/146 (82%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 343 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 399
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 400 DGQVNYEEFVQMMTAK 415
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 120/146 (82%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
+EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++ G ++
Sbjct: 382 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 438
Query: 66 FPEFLTVMARK 76
+ EF+ +M K
Sbjct: 439 YEEFVQMMTAK 449
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 200 bits (509), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 120/146 (82%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 343 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 399
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 400 DGQVNYEEFVQMMTAK 415
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 200 bits (508), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 118/144 (81%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
QLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + GT
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 64 IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVN 123
IDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV+
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 124 EMIQEADINGDGRINYEDFVTLMT 147
EMI+EADI+GDG++NYE+FV +MT
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMMT 144
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 199 bits (507), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 122/148 (82%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MADQLT++QI++FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFL +MARK+ DS EE+K+AF+VFDK + G+I A ELRHVMT LGE+L+++
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+EAD++GDG+INYE+FV +M +
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMA 148
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE++ KEAF F++ +G I EL VM LG T+ E+ ++IRE DV+
Sbjct: 77 MKDTDSEEEL---KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 133
Query: 61 RGTIDFPEFLTVMARK 76
G I++ EF+ VM K
Sbjct: 134 DGQINYEEFVKVMMAK 149
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 199 bits (507), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 122/148 (82%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MADQLTE+QI++FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTIDFPEFL +MARK+ DS EE+K+AF+VFDK + G+I A ELRHVMT LGE+L+++
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMTS 148
EV+EMI+EAD++GDG+INY++FV +M +
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMA 148
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE++ KEAF F++ +G I EL VM LG T+ E+ ++IRE DV+
Sbjct: 77 MKDTDSEEEL---KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 133
Query: 61 RGTIDFPEFLTVMARK 76
G I++ EF+ VM K
Sbjct: 134 DGQINYDEFVKVMMAK 149
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 199 bits (505), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 118/144 (81%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
LTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + GTI
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 65 DFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNE 124
DFPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV+E
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 125 MIQEADINGDGRINYEDFVTLMTS 148
MI+EADI+GDG++NYE+FV +MT+
Sbjct: 121 MIREADIDGDGQVNYEEFVQMMTA 144
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 199 bits (505), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 96/146 (65%), Positives = 119/146 (81%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFPEFLT+MAR + DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 377 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 433
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 434 DGQVNYEEFVQMMTAK 449
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 199 bits (505), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 96/146 (65%), Positives = 119/146 (81%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFPEFL +MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV
Sbjct: 354 TIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 413
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
+EMI+EADI+GDG++NYE+FV +MT+
Sbjct: 414 DEMIREADIDGDGQVNYEEFVQMMTA 439
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 368 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 424
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 425 DGQVNYEEFVQMMTAK 440
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 197 bits (501), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/143 (65%), Positives = 117/143 (81%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
TEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + GTID
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 66 FPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEM 125
FPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV+EM
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 126 IQEADINGDGRINYEDFVTLMTS 148
I+EADI+GDG++NYE+FV +MT+
Sbjct: 123 IREADIDGDGQVNYEEFVQMMTA 145
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 74 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 130
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 131 DGQVNYEEFVQMMTAK 146
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 197 bits (501), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/143 (65%), Positives = 117/143 (81%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
TEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + GTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 66 FPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEM 125
FPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV+EM
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 120
Query: 126 IQEADINGDGRINYEDFVTLMTS 148
I+EADI+GDG++NYE+FV +MT+
Sbjct: 121 IREADIDGDGQVNYEEFVQMMTA 143
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 72 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 128
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 129 DGQVNYEEFVQMMTAK 144
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 197 bits (500), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 119/147 (80%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLT+EQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFL +MARK+ DS EE+K+AF+VFDK G+I A ELRHVMT LGE+L+++E
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EAD++GDG++NYE+FV +M +
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVMMA 147
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE++ KEAF F++ G+G I EL VM LG T+ E+ ++IRE DV+
Sbjct: 76 MKDTDSEEEL---KEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 132
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ VM K
Sbjct: 133 DGQVNYEEFVQVMMAK 148
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 195 bits (496), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 92/147 (62%), Positives = 119/147 (80%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLT+EQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFL +MARK+ DS E++K+AF+VFDK G+I A ELRHVMT LGE+L+++E
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EAD++GDG++NYE+FV +M +
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVMMA 147
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE++ KEAF F++ G+G I EL VM LG T+ E+ ++IRE DV+
Sbjct: 76 MKDTDSEEKL---KEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 132
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ VM K
Sbjct: 133 DGQVNYEEFVQVMMAK 148
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 194 bits (494), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/147 (63%), Positives = 117/147 (79%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
A+QLTEEQI +FKEAF+ F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFL++MARK+ DS EE+ +AF+VFD+ G I A ELRHVMT LGE+L++DE
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EADI+GDG INYE+FV +M S
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMMVS 147
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M +Q +EE++ EAF F+R G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 76 MKEQDSEEEL---IEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDG 132
Query: 61 RGTIDFPEFLTVMARK 76
G I++ EF+ +M K
Sbjct: 133 DGHINYEEFVRMMVSK 148
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 192 bits (488), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 116/147 (78%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
A +LTEEQI +FKEAF+ F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFL++MARK+ DS EE+ +AF+VFD+ G I A ELRHVMT LGE+L++DE
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+EADI+GDG INYE+FV +M S
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMMVS 147
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M +Q +EE++ EAF F+R G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 76 MKEQDSEEEL---IEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDG 132
Query: 61 RGTIDFPEFLTVMARK 76
G I++ EF+ +M K
Sbjct: 133 DGHINYEEFVRMMVSK 148
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 191 bits (485), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/143 (65%), Positives = 117/143 (81%), Gaps = 1/143 (0%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
TEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + GTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 66 FPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEM 125
FPEFLT+MARK+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV+EM
Sbjct: 61 FPEFLTMMARKMKDTDS-EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 119
Query: 126 IQEADINGDGRINYEDFVTLMTS 148
I+EA+I+GDG++NYE+FV +MT+
Sbjct: 120 IREANIDGDGQVNYEEFVQMMTA 142
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MA ++ + + +EAF F++ G+G I EL VM LG T+ E+ ++IRE +++
Sbjct: 68 MARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDG 127
Query: 61 RGTIDFPEFLTVM 73
G +++ EF+ +M
Sbjct: 128 DGQVNYEEFVQMM 140
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 191 bits (485), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 116/144 (80%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
LT+EQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + GTI
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 65 DFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNE 124
DFPEFL +MARK+ DS EE+K+AF+VFDK G+I A ELRHVMT LGE+L+++EV+E
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 125 MIQEADINGDGRINYEDFVTLMTS 148
MI+EAD++GDG++NYE+FV +M +
Sbjct: 121 MIREADVDGDGQVNYEEFVQVMMA 144
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE++ KEAF F++ G+G I EL VM LG T+ E+ ++IRE DV+
Sbjct: 73 MKDTDSEEEL---KEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 129
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ VM K
Sbjct: 130 DGQVNYEEFVQVMMAK 145
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 189 bits (481), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/146 (62%), Positives = 116/146 (79%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I +LGTVMR LG PTEAEL D+I E+ + G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
TIDFP+FLT+MARK+ DS EEI++AF+VF K GYI A +LRHVMT LGE+L+++EV
Sbjct: 363 TIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEV 422
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
+EMI+EA I+GDG++NYE FV +MT+
Sbjct: 423 DEMIREAGIDGDGQVNYEQFVQMMTA 448
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F + G+G I +L VM LG T+ E+ ++IRE ++
Sbjct: 377 MKDTDSEEEI---REAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDG 433
Query: 61 RGTIDFPEFLTVMARK 76
G +++ +F+ +M K
Sbjct: 434 DGQVNYEQFVQMMTAK 449
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 189 bits (479), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 90/147 (61%), Positives = 117/147 (79%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQ+ +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D++ EID +
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GT+DFPEFL +MARK+ D+ EEI++AF+VFDK G++ A ELRHVMT LGE+LS++E
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+EMI+ AD +GDG++NYE+FV ++ S
Sbjct: 121 VDEMIRAADTDGDGQVNYEEFVRVLVS 147
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D EE+I +EAF F++ G+G + EL VM LG ++ E+ ++IR D +
Sbjct: 76 MKDTDNEEEI---REAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDG 132
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ V+ K
Sbjct: 133 DGQVNYEEFVRVLVSK 148
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 188 bits (477), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 112/147 (76%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTV R LG PTEAEL D I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFLT ARK DS EEI++AF+VFDK GYI A ELRHV T LGE+L+++E
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+E I+EADI+GDG++NYE+FV T+
Sbjct: 121 VDEXIREADIDGDGQVNYEEFVQXXTA 147
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
D +EE+I +EAF F++ G+G I EL V LG T+ E+ + IRE D++ G
Sbjct: 78 DTDSEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDG 134
Query: 63 TIDFPEFLTVMARK 76
+++ EF+ K
Sbjct: 135 QVNYEEFVQXXTAK 148
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 186 bits (473), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/147 (62%), Positives = 112/147 (76%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTV R LG PTEAEL D I E+D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTIDFPEFLT ARK DS EEI++AF+VFDK GYI A ELRHV T LGE+L+++E
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 121
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V++ I+EADI+GDG++NYE+FV T+
Sbjct: 122 VDQXIREADIDGDGQVNYEEFVQXXTA 148
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
D +EE+I +EAF F++ G+G I EL V LG T+ E+ IRE D++ G
Sbjct: 79 DTDSEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDG 135
Query: 63 TIDFPEFLTVMARK 76
+++ EF+ K
Sbjct: 136 QVNYEEFVQXXTAK 149
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 183 bits (465), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 111/147 (75%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTV R LG PTEAEL D I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTI+FPEFLT AR DS EEI++AF+VFDK GYI A ELRHV T LGE+L+++E
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V+E I+EADI+GDG++NYE+FV T+
Sbjct: 121 VDEXIREADIDGDGQVNYEEFVQXXTA 147
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
D +EE+I +EAF F++ G+G I EL V LG T+ E+ + IRE D++ G
Sbjct: 78 DTDSEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDG 134
Query: 63 TIDFPEFLTVMARK 76
+++ EF+ K
Sbjct: 135 QVNYEEFVQXXTAK 148
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 177 bits (450), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 114/147 (77%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
AD L+EEQI DFKEAF F++ GDG I + EL TV+R L PTE EL D+I E+D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTI+F EFL++MA+K+ D+ EE+K+AF+VFDK + GYI A ELRHVM LGE+L+++E
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V +MI+EAD++GDG++NYE+FV +M +
Sbjct: 121 VEQMIKEADLDGDGQVNYEEFVKMMMT 147
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 154 bits (389), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 108/144 (75%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
+LTEEQI +FK+AF F+++G G+I ELGT+MR LG PTEAEL DLI E + N G
Sbjct: 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQ 62
Query: 64 IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVN 123
++F EF +MA+++ D+ EE+++AF++FD+ G+I ELR VM LGE+++++E++
Sbjct: 63 LNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEID 122
Query: 124 EMIQEADINGDGRINYEDFVTLMT 147
EMI+EAD +GDG INYE+FV +++
Sbjct: 123 EMIREADFDGDGMINYEEFVWMIS 146
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 1 MADQLTEEQIND-FKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVN 59
MA Q+ E + +EAF F+R GDG I EL VM LG T+ E+ ++IRE D +
Sbjct: 72 MAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFD 131
Query: 60 QRGTIDFPEFLTVMARK 76
G I++ EF+ ++++K
Sbjct: 132 GDGMINYEEFVWMISQK 148
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 152 bits (385), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M+ LTEEQI +FKEAF+ F++ G I EL TVMR LGL+P+EAE+ DL+ EIDV+
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
I+F EFL +M+R+L DS +E+ +AF+VFDK+ G I A EL+HV+T++GE+L++
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMT 147
EV+EM++E +G G IN + F L++
Sbjct: 121 EVDEMLREVS-DGSGEINIKQFAALLS 146
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 149 bits (375), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 107/146 (73%), Gaps = 1/146 (0%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+ LTEEQI +FKEAF+ F++ +G I EL TVMR LGL+P+EAE+ DL+ EIDV+
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 61
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
I+F EFL +M+R+L + DS +E+ +AF+VFDK+ G I A EL+HV+T++GE+L++ E
Sbjct: 62 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 121
Query: 122 VNEMIQEADINGDGRINYEDFVTLMT 147
V++M++E +G G IN + F L++
Sbjct: 122 VDDMLREVS-DGSGEINIQQFAALLS 146
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 37/107 (34%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADI------- 131
T + E K+AF +FDK G I + EL VM +LG SE EVN+++ E D+
Sbjct: 6 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 65
Query: 132 ------------------------------NGDGRINYEDFVTLMTS 148
NGDG I+ + ++TS
Sbjct: 66 FSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTS 112
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 149 bits (375), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 107/146 (73%), Gaps = 1/146 (0%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+ LTEEQI +FKEAF+ F++ +G I EL TVMR LGL+P+EAE+ DL+ EIDV+
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
I+F EFL +M+R+L + DS +E+ +AF+VFDK+ G I A EL+HV+T++GE+L++ E
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMT 147
V++M++E +G G IN + F L++
Sbjct: 121 VDDMLREVS-DGSGEINIQQFAALLS 145
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 37/107 (34%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADI------- 131
T + E K+AF +FDK G I + EL VM +LG SE EVN+++ E D+
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 132 ------------------------------NGDGRINYEDFVTLMTS 148
NGDG I+ + ++TS
Sbjct: 65 FSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTS 111
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 132 bits (332), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 91/121 (75%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+ LTEEQI +FKEAF+ F++ +G I EL TVMR LGL+P+EAE+ DL+ EIDV+
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
I+F EFL +M+R+L + DS +E+ +AF+VFDK+ G I A EL+HV+T++GE+L++ E
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
Query: 122 V 122
+
Sbjct: 121 L 121
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + E K+AF +FDK G I + EL VM +LG SE EVN+++ E D++G+ +I
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 139 YEDFVTLMT 147
+ +F+ LM+
Sbjct: 65 FSEFLALMS 73
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 96/145 (66%), Gaps = 3/145 (2%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L+EE I +FK AF F+ G G I + ELGTVMR LG TPT+ EL +I E+D + GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 65 DFPEFLTVMARKLN---TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
DF EFL +M R++ S EE+ + F++FD++ GYI A+EL + GE ++++E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
+ ++++ D N DGRI++++F+ +M
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 74 ARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADING 133
AR + + E K AF +FD G I EL VM LG+ +++E++ +I+E D +G
Sbjct: 7 ARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDG 66
Query: 134 DGRINYEDFVTLMT 147
G I++E+F+ +M
Sbjct: 67 SGTIDFEEFLVMMV 80
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 127 bits (318), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 96/145 (66%), Gaps = 3/145 (2%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L+EE I +FK AF F+ G G I + ELGTVMR LG TPT+ EL +I E+D + GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 65 DFPEFLTVMARKLN---TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
DF EFL +M R++ S EE+ + F++FD++ GYI A+EL + GE ++++E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
+ ++++ D N DGRI++++F+ +M
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 74 ARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADING 133
AR + + E K AF +FD G I EL VM LG+ +++E++ +I+E D +G
Sbjct: 7 ARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDG 66
Query: 134 DGRINYEDFVTLMT 147
G I++E+F+ +M
Sbjct: 67 SGTIDFEEFLVMMV 80
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 124 bits (311), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 87/142 (61%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
LTEEQ + +EAF F+ G G I EL MR LG P + E+ +I EID + GTI
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 65 DFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNE 124
DF EFLT+M K+ DS EEI +AF++FD G I +LR V LGE L+E+E+ E
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 125 MIQEADINGDGRINYEDFVTLM 146
MI EAD N D I+ ++F+ +M
Sbjct: 142 MIAEADRNDDNEIDEDEFIRIM 163
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + +EI++AF +FD G I A EL+ M LG ++E+ +MI E D +G G I+
Sbjct: 23 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 82
Query: 139 YEDFVTLMTS 148
+E+F+T+MT+
Sbjct: 83 FEEFLTMMTA 92
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 124 bits (310), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 94/147 (63%), Gaps = 4/147 (2%)
Query: 4 QLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 63 TIDFPEFLTVMARKL---NTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE 119
T+DF EFL +M R + + S EE+ F+++DK+ GYI DEL+ ++ GE ++E
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITE 130
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLM 146
D++ E++++ D N DGRI+Y++F+ M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 124 bits (310), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 94/147 (63%), Gaps = 4/147 (2%)
Query: 4 QLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 63 TIDFPEFLTVMARKL---NTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE 119
T+DF EFL +M R + + S EE+ F++FDK+ GYI DEL+ ++ GE ++E
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITE 130
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLM 146
D++ E++++ D N DGRI+Y++++ M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEWLEFM 157
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 123 bits (308), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 95/149 (63%), Gaps = 4/149 (2%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D +
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 RGTIDFPEFLTVMARKL---NTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERL 117
GT+DF EFL +M R + + S EE+ F++FDK+ GYI +EL+ ++ GE +
Sbjct: 69 SGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETI 128
Query: 118 SEDEVNEMIQEADINGDGRINYEDFVTLM 146
+ED++ E++++ D N DGRI+Y++F+ M
Sbjct: 129 TEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 122 bits (307), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQ 91
GTIDFPEFLT+MARK+ DS EEI++AF+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + E K+AF +FDK G I EL VM +LG+ +E E+ +MI E D +G+G I+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 139 YEDFVTLM 146
+ +F+T+M
Sbjct: 65 FPEFLTMM 72
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 122 bits (307), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 96/145 (66%), Gaps = 3/145 (2%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L+EE I +FK AF F+ G G I ELGTVMR LG PT+ EL +I E+D + GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 DFPEFLTVMARKLN---TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
DF EFL +M R++ S EE++ F++FDK+ G+I +EL ++ GE ++E++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
+ ++++++D N DGRI++++F+ +M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 74 ARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADING 133
AR + + E K AF +FD G I EL VM LG+ +++E++ +I+E D +G
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 134 DGRINYEDFVTLMT 147
G I++E+F+ +M
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 122 bits (306), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L+EE I +FK AF F+ G G I ELGTVMR LG PT+ EL +I E+D + GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 DFPEFLTVMARKLN---TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
DF EFL +M R++ S EE+ F++FDK+ G+I +EL ++ GE ++E++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
+ ++++++D N DGRI++++F+ +M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 74 ARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADING 133
AR + + E K AF +FD G I EL VM LG+ +++E++ +I+E D +G
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 134 DGRINYEDFVTLMT 147
G I++E+F+ +M
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 122 bits (306), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L+EE I +FK AF F+ G G I ELGTVMR LG PT+ EL +I E+D + GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 65 DFPEFLTVMARKLN---TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
DF EFL +M R++ S EE+ F++FDK+ G+I +EL ++ GE ++E++
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
+ ++++++D N DGRI++++F+ +M
Sbjct: 131 IEDLMKDSDKNNDGRIDFDEFLKMM 155
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 74 ARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADING 133
AR + + E K AF +FD G I EL VM LG+ +++E++ +I+E D +G
Sbjct: 7 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 66
Query: 134 DGRINYEDFVTLMT 147
G I++E+F+ +M
Sbjct: 67 SGTIDFEEFLVMMV 80
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 122 bits (306), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L+EE I +FK AF F+ G G I ELGTVMR LG PT+ EL +I E+D + GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 DFPEFLTVMARKLN---TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
DF EFL +M R++ S EE+ F++FDK+ G+I +EL ++ GE ++E++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
+ ++++++D N DGRI++++F+ +M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 74 ARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADING 133
AR + + E K AF +FD G I EL VM LG+ +++E++ +I+E D +G
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 134 DGRINYEDFVTLMT 147
G I++E+F+ +M
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 122 bits (306), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 93/147 (63%), Gaps = 4/147 (2%)
Query: 4 QLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 63 TIDFPEFLTVMARKL---NTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE 119
T+DF EFL +M R + + S EE+ F++ DK+ GYI DEL+ ++ GE ++E
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITE 130
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLM 146
D++ E++++ D N DGRI+Y++F+ M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 122 bits (306), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 93/147 (63%), Gaps = 4/147 (2%)
Query: 4 QLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 63 TIDFPEFLTVMARKL---NTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE 119
T+DF EFL +M R + + S EE+ F++FDK+ GYI DEL+ ++ GE ++E
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITE 130
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLM 146
D++ E++++ D N DGRI+Y++ + M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEXLEFM 157
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 94/147 (63%), Gaps = 4/147 (2%)
Query: 4 QLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 63 TIDFPEFLTVMARKL---NTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE 119
T+DF EFL +M R + + + EE+ F++FDK+ GYI +EL+ ++ GE ++E
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE 130
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLM 146
D++ E++++ D N DGRI+Y++F+ M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 87/142 (61%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
LTEEQ + +EAF F+ G G I EL MR LG P + E+ +I +ID + GTI
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 65 DFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNE 124
DF EFL +M K+ DS EEI +AF++FD + G I L+ V LGE ++++E+ E
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 125 MIQEADINGDGRINYEDFVTLM 146
MI EAD +GDG +N E+F +M
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIM 143
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + +EI++AF +FD G I A EL+ M LG ++E+ +MI + D +G G I+
Sbjct: 3 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTID 62
Query: 139 YEDFVTLMTS 148
+E+F+ +MT+
Sbjct: 63 FEEFLQMMTA 72
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 16 AFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFLTVMAR 75
AF F+ G+I L V + LG T+ EL ++I E D + G ++ EF +M +
Sbjct: 86 AFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIMKK 145
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 120 bits (302), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 94/145 (64%), Gaps = 3/145 (2%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L+EE I +FK AF F+ G G I ELGTVMR LG PT+ EL +I E+D + GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 DFPEFLTVMARKLN---TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
DF EFL +M R++ S EE+ F++FDK+ G+I +EL ++ GE + E++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
+ ++++++D N DGRI++++F+ +M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 74 ARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADING 133
AR + + E K AF +FD G I EL VM LG+ +++E++ +I+E D +G
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 134 DGRINYEDFVTLMT 147
G I++E+F+ +M
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 119 bits (299), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 95/149 (63%), Gaps = 4/149 (2%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D +
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 RGTIDFPEFLTVMARKL---NTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERL 117
GT+DF EFL +M R + + + EE+ F++FDK+ GYI +EL+ ++ GE +
Sbjct: 69 SGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETI 128
Query: 118 SEDEVNEMIQEADINGDGRINYEDFVTLM 146
+ED++ E++++ D N DGRI+Y++F+ M
Sbjct: 129 TEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 117 bits (293), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 89/141 (63%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
TEEQ + +EAF F+ G G I + EL MR LG P + E+ +I EID G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 66 FPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEM 125
F +FLTVM +K++ D+ EEI +AF++FD + G I L+ V LGE L+++E+ EM
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 126 IQEADINGDGRINYEDFVTLM 146
I EAD +GDG ++ ++F+ +M
Sbjct: 121 IDEADRDGDGEVSEQEFLRIM 141
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + +EI++AF +FD G I EL+ M LG ++E+ +MI E D G G++N
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 139 YEDFVTLMT 147
+ DF+T+MT
Sbjct: 61 FGDFLTVMT 69
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M+++ T+E+I +AF F+ G+I L V + LG T+ EL ++I E D +
Sbjct: 72 MSEKDTKEEIL---KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 128
Query: 61 RGTIDFPEFLTVMAR 75
G + EFL +M +
Sbjct: 129 DGEVSEQEFLRIMKK 143
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 62/80 (77%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLNTPD 81
GTIDFPEFLT+MARK+ D
Sbjct: 61 GTIDFPEFLTMMARKMKDTD 80
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 85 EIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVT 144
E K+AF +FDK G I EL VM +LG+ +E E+ +MI E D +G+G I++ +F+T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 LM 146
+M
Sbjct: 71 MM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 110 bits (275), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 61/76 (80%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKL 77
GTIDFPEFLT+MARK+
Sbjct: 61 GTIDFPEFLTMMARKM 76
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + E K+AF +FDK G I EL VM +LG+ +E E+ +MI E D +G+G I+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 139 YEDFVTLM 146
+ +F+T+M
Sbjct: 65 FPEFLTMM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 61/76 (80%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKL 77
GTIDFPEFLT+MARK+
Sbjct: 61 GTIDFPEFLTMMARKM 76
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + E K+AF +FDK G I EL VM +LG+ +E E+ +MI E D +G+G I+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 139 YEDFVTLM 146
+ +F+T+M
Sbjct: 65 FPEFLTMM 72
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 61/76 (80%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKL 77
GTIDFPEFLT+MARK+
Sbjct: 61 GTIDFPEFLTMMARKM 76
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + E K+AF +FDK G I EL VM +LG+ +E E+ +MI E D +G+G I+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 139 YEDFVTLM 146
+ +F+T+M
Sbjct: 65 FPEFLTMM 72
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 109 bits (273), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 61/77 (79%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 62 GTIDFPEFLTVMARKLN 78
GTIDFPEFLT+MARK+
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + E K+AF +FDK G I EL VM +LG+ +E E+ +MI E D +GDG I+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 139 YEDFVTLM 146
+ +F+T+M
Sbjct: 65 FPEFLTMM 72
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 60/75 (80%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARK 76
GTIDFPEFLT+MARK
Sbjct: 61 GTIDFPEFLTMMARK 75
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + E K+AF +FDK G I EL VM +LG+ +E E+ +MI E D +G+G I+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 139 YEDFVTLM 146
+ +F+T+M
Sbjct: 65 FPEFLTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 60/75 (80%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 62 GTIDFPEFLTVMARK 76
GTIDFPEFLT+MARK
Sbjct: 62 GTIDFPEFLTMMARK 76
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + E K+AF +FDK G I EL VM +LG+ +E E+ +MI E D +G+G I+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 139 YEDFVTLM 146
+ +F+T+M
Sbjct: 66 FPEFLTMM 73
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 83/144 (57%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
+L EEQ + EAFS F+ DG + HEL M+ LG + E+LDLI E D R
Sbjct: 16 ELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHL 75
Query: 64 IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVN 123
+ + +F VM K+ D +EIK+AFQ+FD G I LR V LGE L+++E+
Sbjct: 76 MKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELR 135
Query: 124 EMIQEADINGDGRINYEDFVTLMT 147
MI+E D++GDG IN +F+ + T
Sbjct: 136 AMIEEFDLDGDGEINENEFIAICT 159
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 60/75 (80%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D + G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 63 TIDFPEFLTVMARKL 77
TIDFPEFLT+MARK+
Sbjct: 62 TIDFPEFLTMMARKM 76
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + E K+AF +FDK G I EL VM +LG+ +E E+ +MI E D +G+G I+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 139 YEDFVTLM 146
+ +F+T+M
Sbjct: 65 FPEFLTMM 72
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 107 bits (267), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 61/76 (80%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
ADQLT+EQI++FKEAFS F++ GDG I ELGTVMR LG PTEAEL D+I E+D +
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLTVMARKL 77
GTIDFPEFL +MARK+
Sbjct: 61 GTIDFPEFLNLMARKM 76
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + E K+AF +FDK G I EL VM +LG+ +E E+ +MI E D +G+G I+
Sbjct: 5 TDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 139 YEDFVTLMT 147
+ +F+ LM
Sbjct: 65 FPEFLNLMA 73
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 59/73 (80%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
DQLTEEQI +FKEAFS +++ GDG I ELGTVMR LGL PTEAEL D+I E+D + G
Sbjct: 2 DQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNG 61
Query: 63 TIDFPEFLTVMAR 75
TIDFPEFLT+MAR
Sbjct: 62 TIDFPEFLTMMAR 74
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + E K+AF ++DK G I EL VM +LG +E E+ +MI E D +G+G I+
Sbjct: 5 TEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTID 64
Query: 139 YEDFVTLM 146
+ +F+T+M
Sbjct: 65 FPEFLTMM 72
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 94/152 (61%), Gaps = 5/152 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M L E+I + +EAF F++ DG I +LG MR +G PTE EL++L ++I++N
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 61 RGTIDFPEFLTVMARKL--NTPD--STEEIKQAFQVFDKHKQGYICADELRHVMTT-LGE 115
G +DF +F+ +M KL T D +E++ AF+ FD + G I ELR M LG
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGH 120
Query: 116 RLSEDEVNEMIQEADINGDGRINYEDFVTLMT 147
++ ++ E+I++ D+NGDGR+++E+FV +M+
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGTVMR-FLGLTPTEAELLDLIREIDVNQRGTIDFPE 68
+ + ++AF F+ GDG I EL MR LG ++ ++IR++D+N G +DF E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 69 FLTVMAR 75
F+ +M+R
Sbjct: 147 FVRMMSR 153
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 94/152 (61%), Gaps = 5/152 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M L E+I + +EAF F++ DG I +LG MR +G PTE EL++L ++I++N
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 61 RGTIDFPEFLTVMARKL--NTPD--STEEIKQAFQVFDKHKQGYICADELRHVMTT-LGE 115
G +DF +F+ +M KL T D +E++ AF+ FD + G I ELR M LG
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGH 120
Query: 116 RLSEDEVNEMIQEADINGDGRINYEDFVTLMT 147
++ ++ E+I++ D+NGDGR+++E+FV +M+
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGTVMR-FLGLTPTEAELLDLIREIDVNQRGTIDFPE 68
+ + ++AF F+ GDG I EL MR LG ++ ++IR++D+N G +DF E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 69 FLTVMAR 75
F+ +M+R
Sbjct: 147 FVRMMSR 153
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 105 bits (263), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 93/149 (62%), Gaps = 5/149 (3%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
L E+I + +EAF F++ DG I +LG MR +G PTE EL++L ++I++N G
Sbjct: 18 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 77
Query: 64 IDFPEFLTVMARKL--NTPD--STEEIKQAFQVFDKHKQGYICADELRHVMTT-LGERLS 118
+DF +F+ +M KL T D +E++ AF+ FD + G I ELR M LG ++
Sbjct: 78 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 137
Query: 119 EDEVNEMIQEADINGDGRINYEDFVTLMT 147
++ E+I++ D+NGDGR+++E+FV +M+
Sbjct: 138 HRDIEEIIRDVDLNGDGRVDFEEFVRMMS 166
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGTVMR-FLGLTPTEAELLDLIREIDVNQRGTIDFPE 68
+ + ++AF F+ GDG I EL MR LG ++ ++IR++D+N G +DF E
Sbjct: 101 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
Query: 69 FLTVMAR 75
F+ +M+R
Sbjct: 161 FVRMMSR 167
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 7/138 (5%)
Query: 13 FKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFLTV 72
+K+AFS F+R G GRIP +G ++R G PT AE I EI+ +D +FL V
Sbjct: 7 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDMEQFLQV 62
Query: 73 MARK--LNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEAD 130
+ R + P EE + FQVFDK G I ELR+V+T+LGE+LS +E++E+++
Sbjct: 63 LNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP 122
Query: 131 INGDGRINYEDFVTLMTS 148
+ DG +NY DFV ++ +
Sbjct: 123 VK-DGMVNYHDFVQMILA 139
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 101 bits (252), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 62/73 (84%)
Query: 76 KLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDG 135
K+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV+EMI+EADI+GDG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 136 RINYEDFVTLMTS 148
++NYE+FV +MT+
Sbjct: 61 QVNYEEFVQMMTA 73
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 2 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 58
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 59 DGQVNYEEFVQMMTAK 74
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 80/147 (54%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+ +L EEQ + EAFS F+ DG + HEL + LG + E+LDLI E D
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEG 72
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
R + +F V K+ D +EIK+AFQ+FD G I LR V LGE L+++
Sbjct: 73 RHLXKYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDE 132
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMT 147
E+ I+E D++GDG IN +F+ + T
Sbjct: 133 ELRAXIEEFDLDGDGEINENEFIAICT 159
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 99.8 bits (247), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 60/68 (88%)
Query: 81 DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYE 140
DS EEI++AF+VFDK GYI A +LRHVMT LGE+L+++EV+EMI+EADI+GDG++NYE
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 141 DFVTLMTS 148
DFV +MT+
Sbjct: 64 DFVQMMTA 71
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
D +EE+I +EAF F++ G+G I +L VM LG T+ E+ ++IRE D++ G
Sbjct: 2 DTDSEEEI---REAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDG 58
Query: 63 TIDFPEFLTVMARK 76
+++ +F+ +M K
Sbjct: 59 QVNYEDFVQMMTAK 72
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 99.8 bits (247), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 61/72 (84%)
Query: 77 LNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGR 136
+ DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV+EMI+EADI+GDG+
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 137 INYEDFVTLMTS 148
+NYE+FV +MT+
Sbjct: 61 VNYEEFVQMMTA 72
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 1 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 57
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 58 DGQVNYEEFVQMMTAK 73
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 99.4 bits (246), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 60/68 (88%)
Query: 81 DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYE 140
DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV+EMI+EADI+GDG++NYE
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 141 DFVTLMTS 148
+FV +MT+
Sbjct: 63 EFVQMMTA 70
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
D +EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++ G
Sbjct: 1 DTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 57
Query: 63 TIDFPEFLTVMARK 76
+++ EF+ +M K
Sbjct: 58 QVNYEEFVQMMTAK 71
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 99.0 bits (245), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 60/68 (88%)
Query: 81 DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYE 140
DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV+EMI+EADI+GDG++NYE
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 141 DFVTLMTS 148
+FV +MT+
Sbjct: 62 EFVQMMTA 69
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
+EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++ G ++
Sbjct: 3 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 66 FPEFLTVM 73
+ EF+ +M
Sbjct: 60 YEEFVQMM 67
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 90/149 (60%), Gaps = 7/149 (4%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLI---REIDVNQR 61
+EEQ +FKEAF F+R GDG+I + G VMR LG PT AE++ ++ + ++N +
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 62 GTIDFPEFLTVMARKLNTPDST--EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE 119
T+ F +FL +M D E+ + +VFDK G + E+RHV+ TLGE+++E
Sbjct: 61 -TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 119
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLMTS 148
+EV +++ + + +G INYE+ V ++ S
Sbjct: 120 EEVEQLVAGHE-DSNGCINYEELVRMVLS 147
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 90/149 (60%), Gaps = 7/149 (4%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLI---REIDVNQR 61
+EEQ +FKEAF F+R GDG+I + G VMR LG PT AE++ ++ + ++N +
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 62
Query: 62 GTIDFPEFLTVMARKLNTPDST--EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE 119
T+ F +FL +M D E+ + +VFDK G + E+RHV+ TLGE+++E
Sbjct: 63 -TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 121
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLMTS 148
+EV +++ + + +G INYE+ V ++ S
Sbjct: 122 EEVEQLVAGHE-DSNGCINYEELVRMVLS 149
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 80/137 (58%), Gaps = 4/137 (2%)
Query: 13 FKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFLTV 72
+E F F++ DG++ I ELG+ +R LG PT AEL + +++ + D F TV
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE---FDLATFKTV 63
Query: 73 MARKLNTP-DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADI 131
+ + TP + ++E+ AF+ DK G I ELR ++ LG+ L+ EV E+++E +
Sbjct: 64 YRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSV 123
Query: 132 NGDGRINYEDFVTLMTS 148
+GDG INYE FV ++ +
Sbjct: 124 SGDGAINYESFVDMLVT 140
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%)
Query: 8 EQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFP 67
EQ + +AF +++G+G I EL ++ LG T +E+ +L++E+ V+ G I++
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE 132
Query: 68 EFLTVM 73
F+ ++
Sbjct: 133 SFVDML 138
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYED 141
S ++I++ FQ+FDK G + +EL + +LG+ + E+N + G++N ++
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNAKE 54
Query: 142 F 142
F
Sbjct: 55 F 55
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 88/149 (59%), Gaps = 5/149 (3%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
+ ++Q+ +FKEAF F+R GDG+I + G VMR LG PT AE+L ++ ++ +
Sbjct: 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKS 62
Query: 64 --IDFPEFLTVM--ARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE 119
+DF FL ++ K + E+ + F+VFDK G + ELRHV+TTLGE+++E
Sbjct: 63 RRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTE 122
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLMTS 148
+EV E + + +G INYE F+ + S
Sbjct: 123 EEV-ETVLAGHEDSNGCINYEAFLKHILS 150
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 96.3 bits (238), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 60/68 (88%)
Query: 81 DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYE 140
DS EE+K+AF+VFDK + G+I A ELRHVMT LGE+L+++EV+EMI+EAD++GDG+INYE
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 141 DFVTLMTS 148
+FV +M +
Sbjct: 61 EFVKVMMA 68
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 12 DFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFLT 71
+ KEAF F++ +G I EL VM LG T+ E+ ++IRE DV+ G I++ EF+
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 64
Query: 72 VMARK 76
VM K
Sbjct: 65 VMMAK 69
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 96.3 bits (238), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 58/66 (87%)
Query: 81 DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYE 140
DS EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV+EMI+EADI+GDG++NYE
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 141 DFVTLM 146
+FV +M
Sbjct: 62 EFVQMM 67
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
+EE+I +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++ G ++
Sbjct: 3 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 66 FPEFLTVM 73
+ EF+ +M
Sbjct: 60 YEEFVQMM 67
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 95.9 bits (237), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 60/72 (83%)
Query: 77 LNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGR 136
+ DS EEI++AF+V DK GYI A ELRHVMT LGE+L+++EV+EMI+EADI+GDG+
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 137 INYEDFVTLMTS 148
+NYE+FV +MT+
Sbjct: 82 VNYEEFVQMMTA 93
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M D +EE+I +EAF ++ G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 22 MKDTDSEEEI---REAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 78
Query: 61 RGTIDFPEFLTVMARK 76
G +++ EF+ +M K
Sbjct: 79 DGQVNYEEFVQMMTAK 94
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 58/65 (89%)
Query: 84 EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFV 143
EEI++AF+VFDK GYI A ELRHVMT LGE+L+++EV+EMI+EADI+GDG++NYE+FV
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 144 TLMTS 148
+MT+
Sbjct: 62 QMMTA 66
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 12 DFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFLT 71
+ +EAF F++ G+G I EL VM LG T+ E+ ++IRE D++ G +++ EF+
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 72 VMARK 76
+M K
Sbjct: 63 MMTAK 67
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 95.5 bits (236), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 53/68 (77%)
Query: 47 AELLDLIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADEL 106
AEL D+I E+D + GTIDFPEFLT+MARK+ DS EEI++AF+VFDK GYI A EL
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Query: 107 RHVMTTLG 114
RHVMT LG
Sbjct: 61 RHVMTNLG 68
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLG 41
M D +EE+I +EAF F++ G+G I EL VM LG
Sbjct: 31 MKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLG 68
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 121 EVNEMIQEADINGDGRINYEDFVTLMT 147
E+ +MI E D +G+G I++ +F+T+M
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMA 28
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%)
Query: 77 LNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGR 136
+ DS EE+ +AF+VFD+ G I A ELRHVMT LGE+L++DEV+EMI+EADI+GDG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 137 INYEDFVTLMTS 148
INYE+FV +M S
Sbjct: 61 INYEEFVRMMVS 72
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M +Q +EE++ EAF F+R G+G I EL VM LG T+ E+ ++IRE D++
Sbjct: 1 MKEQDSEEEL---IEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDG 57
Query: 61 RGTIDFPEFLTVMARK 76
G I++ EF+ +M K
Sbjct: 58 DGHINYEEFVRMMVSK 73
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 4/140 (2%)
Query: 7 EEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDF 66
+ QI +FKEAF+ ++ DG I +L ++ +G PT+ L ++ E G I+F
Sbjct: 3 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA----PGPINF 58
Query: 67 PEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMI 126
FLT+ KLN D + I+ AF FD+ G+I D LR ++TT+G+R +++EV+EM
Sbjct: 59 TMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMY 118
Query: 127 QEADINGDGRINYEDFVTLM 146
+EA I+ G NY +F ++
Sbjct: 119 REAPIDKKGNFNYVEFTRIL 138
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 58/68 (85%)
Query: 81 DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYE 140
D+ EE+K+AF+VFDK + GYI A ELRHVM LGE+L+++EV +MI+EAD++GDG++NYE
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 141 DFVTLMTS 148
+FV +M +
Sbjct: 61 EFVKMMMT 68
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 12 DFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFLT 71
+ KEAF F++ +G I EL VM LG T+ E+ +I+E D++ G +++ EF+
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 64
Query: 72 VM 73
+M
Sbjct: 65 MM 66
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 93.2 bits (230), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 58/68 (85%)
Query: 81 DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYE 140
D+ EE+K+AF+VFDK + GYI A ELRHVM LGE+L+++EV +MI+EAD++GDG++NYE
Sbjct: 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
Query: 141 DFVTLMTS 148
+FV +M +
Sbjct: 66 EFVKMMMT 73
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 12 DFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFLT 71
+ KEAF F++ +G I EL VM LG T+ E+ +I+E D++ G +++ EF+
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 72 VM 73
+M
Sbjct: 70 MM 71
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 84/142 (59%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
+LTEEQ + +EAF F+ G G I + EL R LG P + E+ I EID G
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGK 83
Query: 64 IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVN 123
+F +FLTV +K + D+ EEI +AF++FD + G I L+ V LGE L+++E+
Sbjct: 84 XNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 143
Query: 124 EMIQEADINGDGRINYEDFVTL 145
E I EAD +GDG ++ ++F+ +
Sbjct: 144 EXIDEADRDGDGEVSEQEFLRI 165
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + +EI++AF +FD G I EL+ LG ++E+ + I E D G G+ N
Sbjct: 26 TEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXN 85
Query: 139 YEDFVTLMT 147
+ DF+T+ T
Sbjct: 86 FGDFLTVXT 94
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 90.1 bits (222), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 5/150 (3%)
Query: 4 QLTEEQINDFKEAF-SFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
+L+ Q+ + AF F +G GR+ ++G ++ LG+ T++ + LI E D G
Sbjct: 6 KLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNG 65
Query: 63 TIDFPEFLTVMAR----KLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLS 118
IDF F + AR ++N +E+++AF+++DK GYI D +R ++ L E LS
Sbjct: 66 DIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLS 125
Query: 119 EDEVNEMIQEADINGDGRINYEDFVTLMTS 148
++++ MI E D +G G +++E+F+ +MT
Sbjct: 126 SEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 91/146 (62%), Gaps = 7/146 (4%)
Query: 8 EQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLI---REIDVNQRGTI 64
++INDFKEAF F+R GD +I + ++G ++R LG PT AE+ ++ + ++N + I
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAK-KI 59
Query: 65 DFPEFLTVMARKLNTPD--STEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
F EFL ++ N D + E+ + +VFDK G + ELRHV+ TLGE+++E+EV
Sbjct: 60 TFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEV 119
Query: 123 NEMIQEADINGDGRINYEDFVTLMTS 148
E+++ + + +G INYE FV + S
Sbjct: 120 EELMKGQE-DSNGCINYEAFVKHIMS 144
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 89.4 bits (220), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
AD L+EEQI DFKEAF F++ GDG I + EL TV+R L PTE EL D+I E+D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 62 GTIDFPEFLTVMARKLN 78
GTI+F EFL++MA+K+
Sbjct: 61 GTIEFDEFLSLMAKKVK 77
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 85 EIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVT 144
+ K+AF +FDK G I +EL V+ +L + +E+E+ +MI E D +G+G I +++F++
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 145 LMT 147
LM
Sbjct: 71 LMA 73
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 89.4 bits (220), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 56/76 (73%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
AD L+EEQI DFKEAF F++ GDG I + EL TV+R L PTE EL D+I E+D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 62 GTIDFPEFLTVMARKL 77
GTI+F EFL++MA+K+
Sbjct: 61 GTIEFDEFLSLMAKKV 76
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 85 EIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVT 144
+ K+AF +FDK G I +EL V+ +L + +E+E+ +MI E D +G+G I +++F++
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 145 LMT 147
LM
Sbjct: 71 LMA 73
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 56/76 (73%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+ LTEEQI +FKEAF+ F++ +G I EL TVMR LGL+P+EAE+ DL+ EIDV+
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 62 GTIDFPEFLTVMARKL 77
I+F EFL +M+R+L
Sbjct: 61 HQIEFSEFLALMSRQL 76
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + E K+AF +FDK G I + EL VM +LG SE EVN+++ E D++G+ +I
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 139 YEDFVTLMT 147
+ +F+ LM+
Sbjct: 65 FSEFLALMS 73
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 86.3 bits (212), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
A++L+EE+I KE F + G I EL ++ +G E+E+ DL+ D+++
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
GTID+ EF+ LN + E + AF FDK GYI DE++ G L +
Sbjct: 61 GTIDYGEFIAATVH-LNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIH 117
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
+++MI+E D + DG+I+Y +F +M
Sbjct: 118 IDDMIKEIDQDNDGQIDYGEFAAMM 142
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 16 AFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFLTVMAR 75
AFS+F++ G G I + E+ + GL + D+I+EID + G ID+ EF +M +
Sbjct: 87 AFSYFDKDGSGYITLDEIQQACKDFGLDDIHID--DMIKEIDQDNDGQIDYGEFAAMMRK 144
Query: 76 K 76
+
Sbjct: 145 R 145
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 85.5 bits (210), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 85/145 (58%), Gaps = 6/145 (4%)
Query: 4 QLTEEQINDFKEAFSFFNRQG--DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+L++++I+D K+ F F+ DG + +LG V R LG+ P ++ + + ++
Sbjct: 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK 61
Query: 62 GTIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
++ F EFL ++ T + +AF+ FD+ QG+I ELRHV+T LGERLS++
Sbjct: 62 -SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE 120
Query: 121 EVNEMIQEADINGD--GRINYEDFV 143
+V+E+I+ D+ D G + YEDFV
Sbjct: 121 DVDEIIKLTDLQEDLEGNVKYEDFV 145
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 85.5 bits (210), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 85/145 (58%), Gaps = 6/145 (4%)
Query: 4 QLTEEQINDFKEAFSFFNRQG--DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+L++++I+D K+ F F+ DG + +LG V R LG+ P ++ + + ++
Sbjct: 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK 61
Query: 62 GTIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
++ F EFL ++ T + +AF+ FD+ QG+I ELRHV+T LGERLS++
Sbjct: 62 -SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE 120
Query: 121 EVNEMIQEADINGD--GRINYEDFV 143
+V+E+I+ D+ D G + YEDFV
Sbjct: 121 DVDEIIKLTDLQEDLEGNVKYEDFV 145
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+A+ L+EE+I KE F+ + G+I EL ++ +G E+E+LDL + DV+
Sbjct: 17 IAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDN 76
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
GTID+ EF+ LN + + + AF FDK GYI DEL+ G + +
Sbjct: 77 SGTIDYKEFIAATLH-LNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDV 133
Query: 121 EVNEMIQEADINGDGRINYEDFVT 144
+ E+ ++ D + DGRI+Y +FV
Sbjct: 134 RIEELXRDVDQDNDGRIDYNEFVA 157
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
Query: 5 LTEEQINDFKEAFSFFNRQG--DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
L++++I+D K+ F F+ DG + +LG V R LG+ P ++ + + ++
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK- 59
Query: 63 TIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
++ F EFL ++ T + +AF+ FD+ QG+I ELRHV+T LGERLS+++
Sbjct: 60 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 119
Query: 122 VNEMIQEADINGD--GRINYEDFV 143
V+E+I+ D+ D G + YEDFV
Sbjct: 120 VDEIIKLTDLQEDLEGNVKYEDFV 143
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ--R 61
+ ++ +DFKEAF F+R GD +I ++G + R LG PT AE+ ++ +
Sbjct: 1 EFSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA 60
Query: 62 GTIDFPEFLTVMARKLNTPD--STEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE 119
I F EFL ++ N D + E+ + +VFDK G + ELRHV+ TLGE+++E
Sbjct: 61 AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTE 120
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLMTS 148
+EV E+++ + + +G INYE FV + S
Sbjct: 121 EEVEELMKGQE-DSNGCINYEAFVKHIMS 148
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 88/146 (60%), Gaps = 8/146 (5%)
Query: 4 QLTEEQINDFK---EAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+L++++I+D K E F+F++ + DG + +LG V R LG+ P ++ + + +
Sbjct: 2 KLSQDEIDDLKDVFELFAFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGE 60
Query: 61 RGTIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE 119
+ ++ F EFL ++ T + +AF+ FD+ QG+I ELRHV+T LGERLS+
Sbjct: 61 K-SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 119
Query: 120 DEVNEMIQEADINGD--GRINYEDFV 143
++V+E+I+ D+ D G + YEDFV
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFV 145
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ--RGT 63
++ +DFKEAF F+R GD +I ++G + R LG PT AE+ ++ +
Sbjct: 1 SKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAA 60
Query: 64 IDFPEFLTVMARKLNTPD--STEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
I F EFL ++ N D + E+ + +VFDK G + ELRHV+ TLGE+++E+E
Sbjct: 61 ITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEE 120
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
V E+++ + + +G INYE FV + S
Sbjct: 121 VEELMKGQE-DSNGCINYEAFVKHIMS 146
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 7 EEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDF 66
++Q+++FKEAF F+ + G I L TV++ G+ A ++ E D G I F
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 67 PEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMI 126
PEFL++M R++ S + ++QAF+ FD GYI L+ + LG+RL E E +
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
Query: 127 QEADINGDGRINYEDFVTLM 146
+ G+I Y++F+ M
Sbjct: 122 GITETE-KGQIRYDNFINTM 140
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 83/143 (58%), Gaps = 6/143 (4%)
Query: 6 TEEQINDFKEAFSFFNRQG--DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
++++I+D K+ F F+ DG + +LG V R LG+ P ++ + + ++ +
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK-S 59
Query: 64 IDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
+ F EFL ++ T + +AF+ FD+ QG+I ELRHV+T LGERLS+++V
Sbjct: 60 LPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 119
Query: 123 NEMIQEADINGD--GRINYEDFV 143
+E+I+ D+ D G + YEDFV
Sbjct: 120 DEIIKLTDLQEDLEGNVKYEDFV 142
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 83/143 (58%), Gaps = 6/143 (4%)
Query: 6 TEEQINDFKEAFSFFNRQG--DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
++++I+D K+ F F+ DG + +LG V R LG+ P ++ + + ++ +
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK-S 59
Query: 64 IDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
+ F EFL ++ T + +AF+ FD+ QG+I ELRHV+T LGERLS+++V
Sbjct: 60 LPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 119
Query: 123 NEMIQEADINGD--GRINYEDFV 143
+E+I+ D+ D G + YEDFV
Sbjct: 120 DEIIKLTDLQEDLEGNVKYEDFV 142
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 4 QLTEEQINDFKEAFSFFNRQG--DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+L++++I+D KE F F+ DG + ++G V R LG+ P ++ + + ++
Sbjct: 2 KLSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEK 61
Query: 62 GTIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
++ F EFL ++ T + +AF+ FD+ QG+I ELRHV++ LGERLS++
Sbjct: 62 -SLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 120
Query: 121 EVNEMIQEADINGD--GRINYEDFV-TLMTS 148
EV+E+I D+ D G + YE+FV +MT
Sbjct: 121 EVDEIINLTDLQEDLEGNVKYEEFVKKVMTG 151
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 6/145 (4%)
Query: 4 QLTEEQINDFKEAFSFFNRQG--DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+L++++I+D KE F F+ DG + ++G V R LG+ P ++ + + ++
Sbjct: 3 KLSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEK 62
Query: 62 GTIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
++ F EFL ++ T + +AF+ FD+ QG+I ELRHV++ LGERLS++
Sbjct: 63 -SLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 121
Query: 121 EVNEMIQEADINGD--GRINYEDFV 143
EV+E+I D+ D G + YE+FV
Sbjct: 122 EVDEIINLTDLQEDLEGNVKYEEFV 146
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 82.8 bits (203), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 6/145 (4%)
Query: 4 QLTEEQINDFKEAFSFFNRQG--DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+L++++I+D K+ F F+ DG + +LG V R LG+ P ++ + + ++
Sbjct: 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK 61
Query: 62 GTIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSED 120
++ F EFL ++ T + +AF+ FD+ QG+I ELRHV++ LGERLS++
Sbjct: 62 -SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 120
Query: 121 EVNEMIQEADINGD--GRINYEDFV 143
EV+E+I D+ D G + YE+FV
Sbjct: 121 EVDEIINLTDLQEDLEGNVKYEEFV 145
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 81/137 (59%), Gaps = 8/137 (5%)
Query: 14 KEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG----TID-FPE 68
K+ F+ F+++G G I LG +R +G PT + D+I D + R T+D
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINA-DSSLRDASSLTLDQITG 65
Query: 69 FLTVMARKLN--TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMI 126
+ V ++L+ T TE+ +AFQVFDK G + +LR+++T LGE+L++ EV+E++
Sbjct: 66 LIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELL 125
Query: 127 QEADINGDGRINYEDFV 143
+ +++ +G I+Y+ F+
Sbjct: 126 KGVEVDSNGEIDYKKFI 142
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 46/74 (62%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
D T+ + DF +AF F+++ G++ + +L ++ LG T+AE+ +L++ ++V+ G
Sbjct: 75 DATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNG 134
Query: 63 TIDFPEFLTVMARK 76
ID+ +F+ + R+
Sbjct: 135 EIDYKKFIEDVLRQ 148
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
T+ Q+ +FKEAF ++ DG I +++ LG TE EL ++ E G I
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPI 106
Query: 65 DFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNE 124
+F FLT+ ++ D + I AF +FD+ G + L+ +TT GE+ S+DEV++
Sbjct: 107 NFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEG-DGKCKEETLKRSLTTWGEKFSQDEVDQ 165
Query: 125 MIQEADINGDGRINYEDFVTLMT 147
+ EA I+G+G I+ + F ++T
Sbjct: 166 ALSEAPIDGNGLIDIKKFAQILT 188
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 48/74 (64%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L+EE I +FK AF F+ G G I ELGTVMR LG PT+ EL +I E+D + GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 65 DFPEFLTVMARKLN 78
DF EFL +M R++
Sbjct: 74 DFEEFLVMMVRQMK 87
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 74 ARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADING 133
AR + + E K AF +FD G I EL VM LG+ ++ E++ +I E D +G
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDG 69
Query: 134 DGRINYEDFVTLMT 147
G I++E+F+ +M
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 48/74 (64%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L+EE I +FK AF F+ G G I ELGTVMR LG PT+ EL +I E+D + GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 DFPEFLTVMARKLN 78
DF EFL +M R++
Sbjct: 74 DFEEFLVMMVRQMK 87
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 74 ARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADING 133
AR + + E K AF +FD G I EL VM LG+ +++E++ +I+E D +G
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 134 DGRINYEDFVTLMT 147
G I++E+F+ +M
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 83/143 (58%), Gaps = 5/143 (3%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
+L ++QI + KEAF+ ++ DG I I++L + LG TP + EL +++E G
Sbjct: 12 KLPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGP 67
Query: 64 IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVN 123
++F FL++ + KL+ DS E I+ AF +FD+ + + ++ ++ +G+ ++DE+
Sbjct: 68 LNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 127
Query: 124 EMIQEADINGDGRINYEDFVTLM 146
+EA + G G+ +Y FV ++
Sbjct: 128 MTFKEAPVEG-GKFDYVRFVAMI 149
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 48/74 (64%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L+EE I +FK AF F+ G G I ELGTVMR LG PT+ EL +I E+D + GTI
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 65 DFPEFLTVMARKLN 78
DF EFL +M R++
Sbjct: 63 DFEEFLVMMVRQMK 76
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 85 EIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVT 144
E K AF +FD G I EL VM LG+ +++E++ +I+E D +G G I++E+F+
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 69
Query: 145 LMT 147
+M
Sbjct: 70 MMV 72
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 47/74 (63%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L+EE I +FK AF F+ G G I LGTVMR LG PT+ EL +I E+D + GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 DFPEFLTVMARKLN 78
DF EFL +M R++
Sbjct: 74 DFEEFLVMMVRQMK 87
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%)
Query: 74 ARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADING 133
AR + + E K AF +FD G I L VM LG+ +++E++ +I+E D +G
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 134 DGRINYEDFVTLMT 147
G I++E+F+ +M
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 25/155 (16%)
Query: 4 QLTEEQINDFKEAFSFFNRQG--DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
QLT+++I + +E F F+ DG + ++G ++R LG+ PTEA+ V+Q
Sbjct: 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQ---------VHQH 52
Query: 62 G--------TIDFPEFLTV---MARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVM 110
G E L + M+ K +T + +E +AF+ FD+ QG I + E+R+V+
Sbjct: 53 GGTKKMGEKAYKLEEILPIYEEMSSK-DTGTAADEFMEAFKTFDREGQGLISSAEIRNVL 111
Query: 111 TTLGERLSEDEVNEMIQEADI--NGDGRINYEDFV 143
LGER++ED+ N++ DI + DG I YED +
Sbjct: 112 KMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLM 146
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M+ + T ++F EAF F+R+G G I E+ V++ LG TE + D+ D+ +
Sbjct: 75 MSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIRE 134
Query: 61 --RGTIDFPEFL-TVMARKLNTPDSTE 84
G I + + + VMA PD ++
Sbjct: 135 DIDGNIKYEDLMKKVMAGPF--PDKSD 159
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 58/83 (69%)
Query: 64 IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVN 123
++F +FLTVM +K++ D+ EEI +AF++FD + G I L+ V LGE L+++E+
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 124 EMIQEADINGDGRINYEDFVTLM 146
EMI EAD +GDG ++ ++F+ +M
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRIM 83
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M+++ T+E+I +AF F+ G+I L V + LG T+ EL ++I E D +
Sbjct: 14 MSEKDTKEEI---LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 70
Query: 61 RGTIDFPEFLTVMAR 75
G + EFL +M +
Sbjct: 71 DGEVSEQEFLRIMKK 85
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 3 DQLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIDFPEFLTVMARKLN 78
GT+DF EFL +M R +
Sbjct: 70 GTVDFDEFLVMMVRSMK 86
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 79 TPDSTEEIKQAFQVFD-KHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
T + E K AF +F + G I EL VM LG+ + +E+ EMI E D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 138 NYEDFVTLMT 147
++++F+ +M
Sbjct: 73 DFDEFLVMMV 82
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 3 DQLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIDFPEFLTVMARKLN 78
GT+DF EFL +M R +
Sbjct: 70 GTVDFDEFLVMMVRSMK 86
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 79 TPDSTEEIKQAFQVFD-KHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
T + E K AF +F + G I EL VM LG+ + +E+ EMI E D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 138 NYEDFVTLMT 147
++++F+ +M
Sbjct: 73 DFDEFLVMMV 82
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+QLTEEQ N+FK AF F + DG I ELG VMR LG PT EL ++I E+D +
Sbjct: 9 VEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 RGTIDFPEFLTVMARKLN 78
GT+DF EFL +M R +
Sbjct: 69 SGTVDFDEFLVMMVRCMK 86
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 79 TPDSTEEIKQAFQVFDKHKQ-GYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
T + E K AF +F + + G I EL VM LG+ + +E+ EMI E D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 138 NYEDFVTLMT 147
++++F+ +M
Sbjct: 73 DFDEFLVMMV 82
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+QLTEEQ N+FK AF F + DG I ELG VMR LG PT EL ++I E+D +
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 RGTIDFPEFLTVMARKLN 78
GT+DF EFL +M R +
Sbjct: 69 SGTVDFDEFLVMMVRCMK 86
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 79 TPDSTEEIKQAFQVFDKHKQ-GYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
T + E K AF +F + + G I EL VM LG+ + +E+ EMI E D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 138 NYEDFVTLMT 147
++++F+ +M
Sbjct: 73 DFDEFLVMMV 82
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D +
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 RGTIDFPEFLTVMARKLN 78
GT+DF EFL +M R +
Sbjct: 69 SGTVDFDEFLVMMVRSMK 86
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 79 TPDSTEEIKQAFQVFD-KHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
T + E K AF +F + G I EL VM LG+ + +E+ EMI E D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 138 NYEDFVTLMT 147
++++F+ +M
Sbjct: 73 DFDEFLVMMV 82
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
+L++ Q+ + KEAF+ ++ DG I + +L + LG P + EL +++E G
Sbjct: 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQ 64
Query: 64 IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVN 123
++F FLT+ K++ D + ++ AF +FD+ QG+I D L+ ++ +G+ S++E+
Sbjct: 65 LNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIK 124
Query: 124 EMIQEADINGDGRINYEDFVTL 145
+ ++A + + + NY V +
Sbjct: 125 NVWKDAPLK-NKQFNYNKMVDI 145
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 3 DQLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIDFPEFLTVMARKLN 78
GT+DF E+L +MAR +
Sbjct: 70 GTVDFDEWLVMMARCMK 86
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 79 TPDSTEEIKQAFQVFD-KHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
T + E K AF +F + G I EL VM LG+ + +E+ EMI E D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 138 NYEDFVTLMT 147
++++++ +M
Sbjct: 73 DFDEWLVMMA 82
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+QLT+EQ N+FK AF F + DG I ELG VMR LG PT EL ++I E+D +
Sbjct: 9 VEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 RGTIDFPEFLTVMARKL 77
GT+DF EFL +M R +
Sbjct: 69 SGTVDFDEFLVMMVRCM 85
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 79 TPDSTEEIKQAFQVFDKHKQ-GYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
T + E K AF +F + + G I EL VM LG+ + +E+ EMI E D +G G +
Sbjct: 13 TDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 138 NYEDFVTLMT 147
++++F+ +M
Sbjct: 73 DFDEFLVMMV 82
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D +
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 RGTIDFPEFLTVMARKLN 78
GT+DF EFL +M R +
Sbjct: 69 SGTVDFDEFLVMMVRCMK 86
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 79 TPDSTEEIKQAFQVFD-KHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
T + E K AF +F + G I EL VM LG+ + +E+ EMI E D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 138 NYEDFVTLMT 147
++++F+ +M
Sbjct: 73 DFDEFLVMMV 82
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
+L ++ + + KEAF+ ++ DG I I++L + LG TP + EL +++E G
Sbjct: 16 RLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGP 71
Query: 64 IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVN 123
++F FL++ + KL+ DS E I+ AF +FD+ + + ++ ++ +G+ ++DE+
Sbjct: 72 LNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 131
Query: 124 EMIQEADINGDGRINYEDFVTLM 146
+EA + G G+ +Y FV ++
Sbjct: 132 MTFKEAPVEG-GKFDYVRFVAMI 153
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
+L ++ + + KEAF+ ++ DG I I++L + LG TP + EL +++E G
Sbjct: 16 RLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGP 71
Query: 64 IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVN 123
++F FL++ + KL+ DS E I+ AF +FD+ + + ++ ++ +G+ ++DE+
Sbjct: 72 LNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 131
Query: 124 EMIQEADINGDGRINYEDFVTLM 146
+EA + G G+ +Y FV ++
Sbjct: 132 MTFKEAPVEG-GKFDYVRFVAMI 153
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+QLTEEQ N+FK AF F DG I ELG VMR LG PT EL ++I E+D +
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 RGTIDFPEFLTVMARKLN 78
GT+DF E+L +M R +
Sbjct: 69 SGTVDFDEWLVMMVRCMK 86
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 79 TPDSTEEIKQAFQVFD-KHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
T + E K AF +F + G I EL VM LG+ + +E+ EMI E D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 138 NYEDFVTLMT 147
++++++ +M
Sbjct: 73 DFDEWLVMMV 82
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
+L ++QI + KEAFS + DG + ++ + LG P + EL +++E G
Sbjct: 11 KLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGP 66
Query: 64 IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVN 123
++F FL++ + KL+ DS E I+ AF +FD+ + + + ++ ++ +G+ ++DE+
Sbjct: 67 LNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMR 126
Query: 124 EMIQEADINGDGRINYEDFVTLM 146
+EA + G G+ +Y F ++
Sbjct: 127 MTFKEAPVEG-GKFDYVKFTAMI 148
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L ++QI + KEAFS + DG + ++ + LG P + EL +++E G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPL 56
Query: 65 DFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNE 124
+F FL++ + KL+ DS E I+ AF +FD+ + + + ++ ++ +G+ ++DE+
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 125 MIQEADINGDGRINYEDFVTLM 146
+EA + G G+ +Y F ++
Sbjct: 117 TFKEAPVEG-GKFDYVKFTAMI 137
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L ++QI + KEAFS + DG + ++ + LG P + EL +++E G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPL 56
Query: 65 DFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNE 124
+F FL++ + KL+ DS E I+ AF +FD+ + + + ++ ++ +G+ ++DE+
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 125 MIQEADINGDGRINYEDFVTLM 146
+EA + G G+ +Y F ++
Sbjct: 117 TFKEAPVEG-GKFDYVKFTAMI 137
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 44/73 (60%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
LTEEQ + +EAF F+ G G I EL MR LG P + E+ +I EID + GTI
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 65 DFPEFLTVMARKL 77
DF EFLT+M K+
Sbjct: 84 DFEEFLTMMTAKM 96
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 62 GTIDFPEFLTVMARKLN-------TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLG 114
G++ + V AR+ T + +EI++AF +FD G I A EL+ M LG
Sbjct: 1 GSMSYKAKTVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALG 60
Query: 115 ERLSEDEVNEMIQEADINGDGRINYEDFVTLMTS 148
++E+ +MI E D +G G I++E+F+T+MT+
Sbjct: 61 FEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTA 94
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 57 DVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTT 112
D + GTID E L V R L EEIK+ DK G I +E +MT
Sbjct: 40 DTDGSGTIDAKE-LKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTA 94
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 85 EIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVT 144
E+K+AF+V DK K+G I D LR ++ +LG+ L+EDE+ MI E D +G G ++YE+F
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 145 LMTS 148
LM S
Sbjct: 68 LMMS 71
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 68.9 bits (167), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEF 69
+ + KEAF+ ++ DG I I++L LG TP + EL +++E G ++F F
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKE----APGPLNFTMF 56
Query: 70 LTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEA 129
L++ + KL+ DS E I+ AF +FD+ + + ++ ++ +G+ ++DE+ +EA
Sbjct: 57 LSIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 116
Query: 130 DINGDGRINYEDFVTLM 146
+ G G+ +Y FV ++
Sbjct: 117 PVEG-GKFDYVRFVAMI 132
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Query: 7 EEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDF 66
++QI + KEAFS + DG + ++ + LG P + EL +++E G ++F
Sbjct: 2 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNF 57
Query: 67 PEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMI 126
FL++ + KL+ DS E I+ AF +FD+ + + + ++ ++ +G+ ++DE+
Sbjct: 58 TMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTF 117
Query: 127 QEADINGDGRINYEDFVTLM 146
+EA + G G+ +Y F ++
Sbjct: 118 KEAPVEG-GKFDYVKFTAMI 136
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 8 EQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFP 67
+QI + KEAFS + DG + ++ + LG P + EL +++E G ++F
Sbjct: 1 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFT 56
Query: 68 EFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQ 127
FL++ + KL+ DS E I+ AF +FD+ + + + ++ ++ +G+ ++DE+ +
Sbjct: 57 MFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFK 116
Query: 128 EADINGDGRINYEDFVTLM 146
EA + G G+ +Y F ++
Sbjct: 117 EAPVEG-GKFDYVKFTAMI 134
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%)
Query: 84 EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFV 143
E+++ AF+ FD+ G+I DELR M LG+ L ++E++ MI+EAD++ DGR+NYE+F
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 144 TLMT 147
++
Sbjct: 66 RMLA 69
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEF 69
+ D + AF F++ GDG I + EL M LG + EL +IRE DV+Q G +++ EF
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 70 LTVMARK 76
++A++
Sbjct: 65 ARMLAQE 71
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
+LTEEQ + +EAF F+ G G I + EL MR LG P + E+ +I EID G
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGK 83
Query: 64 IDFPEFLTVMARKLN 78
++F +FLTVM +K++
Sbjct: 84 MNFGDFLTVMTQKMS 98
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
T + +EI++AF +FD G I EL+ M LG ++E+ +MI E D G G++N
Sbjct: 26 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 85
Query: 139 YEDFVTLMT 147
+ DF+T+MT
Sbjct: 86 FGDFLTVMT 94
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 57 DVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
D + GTID E L V R L EEIK+ DK G + + VMT
Sbjct: 41 DADGTGTIDVKE-LKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMT 94
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 61 RGTIDFPEFLTVMARKLNTP-DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE 119
RG P L+ R ++ P D EEI++AF+VFD+ G+I EL M +LG +E
Sbjct: 13 RGIYTVPNLLS-EQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNE 71
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLM 146
E+ +IQ D++GDG++++E+FVTL+
Sbjct: 72 VELEVIIQRLDMDGDGQVDFEEFVTLL 98
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
+ E+++ + +EAF F+R G+G I ELGT MR LG P E EL +I+ +D++ G +
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 65 DFPEFLTVMA 74
DF EF+T++
Sbjct: 90 DFEEFVTLLG 99
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHEL---GTVMRFLG-----LTPTEAELLDLIREID 57
T E+ + + F ++ GDG++ EL V+R L E E+ ++++E+D
Sbjct: 350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVD 409
Query: 58 VNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERL 117
++ G I++ EF++V K S E +++AF +FD K G I +EL ++ +
Sbjct: 410 FDKNGYIEYSEFISVCMDK-QILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTS--I 466
Query: 118 SEDEVNEMIQEADINGDGRINYEDFVTLM 146
SE N+++ EAD N D I++++FV++M
Sbjct: 467 SEKTWNDVLGEADQNKDNMIDFDEFVSMM 495
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 3 DQLTEEQINDFKEAFSFFNRQG-DGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+QLTEEQ N+FK AF F DG I ELG V R LG PT EL + I E+D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGS 69
Query: 62 GTIDFPEFLTVMAR 75
GT+DF EFL R
Sbjct: 70 GTVDFDEFLVXXVR 83
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 79 TPDSTEEIKQAFQVFD-KHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
T + E K AF +F + G I EL V LG+ + +E+ E I E D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTV 72
Query: 138 NYEDFVT 144
++++F+
Sbjct: 73 DFDEFLV 79
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 1 MADQLT-EEQINDFKEAFSFFNRQGDGRIPIHEL--------GTVMRFLGLTPTEAELLD 51
MA +LT +E+ + + F ++ GDG++ EL G + L E+E+
Sbjct: 335 MASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDA 394
Query: 52 LIREIDVNQRGTIDFPEFLTV-MARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVM 110
++ D ++ G ID+ EF+TV M RK + S ++++ AFQ FD+ G I DEL V
Sbjct: 395 ILGAADFDRNGYIDYSEFVTVAMDRK--SLLSKDKLESAFQKFDQDGNGKISVDELASVF 452
Query: 111 TTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
+ L EMI D N DG +++E+F ++
Sbjct: 453 GL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 486
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 70 LTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL-GERLS-------EDE 121
L MA KL + + T+E+ F+ DK+ G + EL + L GE ++ E E
Sbjct: 332 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 391
Query: 122 VNEMIQEADINGDGRINYEDFVTL 145
V+ ++ AD + +G I+Y +FVT+
Sbjct: 392 VDAILGAADFDRNGYIDYSEFVTV 415
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 1 MADQLT-EEQINDFKEAFSFFNRQGDGRIPIHEL--------GTVMRFLGLTPTEAELLD 51
MA +LT +E+ + + F ++ GDG++ EL G + L E+E+
Sbjct: 52 MASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDA 111
Query: 52 LIREIDVNQRGTIDFPEFLTV-MARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVM 110
++ D ++ G ID+ EF+TV M RK + S ++++ AFQ FD+ G I DEL V
Sbjct: 112 ILGAADFDRNGYIDYSEFVTVAMDRK--SLLSKDKLESAFQKFDQDGNGKISVDELASVF 169
Query: 111 TTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
+ L EMI D N DG +++E+F ++
Sbjct: 170 GL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 203
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 70 LTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL-GERLS-------EDE 121
L MA KL + + T+E+ F+ DK+ G + EL + L GE ++ E E
Sbjct: 49 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 108
Query: 122 VNEMIQEADINGDGRINYEDFVTL 145
V+ ++ AD + +G I+Y +FVT+
Sbjct: 109 VDAILGAADFDRNGYIDYSEFVTV 132
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 7 EEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLD-LIREIDVNQRGTID 65
E +I DFKEAF+ ++ DG I +L +G + E LD +I+E G I+
Sbjct: 3 ETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPIN 58
Query: 66 FPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEM 125
F FLT+ KL D + I AF+V D +G I L ++TT G R + +E+ M
Sbjct: 59 FTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNM 118
Query: 126 IQEADINGDGRINYEDFVTLMT 147
+ G ++Y++ ++T
Sbjct: 119 WAAFPPDVAGNVDYKNICYVIT 140
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 7 EEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLD-LIREIDVNQRGTID 65
E +I DFKEAF+ ++ DG I +L +G + E LD +I+E G I+
Sbjct: 21 ETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPIN 76
Query: 66 FPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEM 125
F FLT+ KL D + I AF+V D +G I L ++TT G R + +E+ M
Sbjct: 77 FTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNM 136
Query: 126 IQEADINGDGRINYEDFVTLMT 147
+ G ++Y++ ++T
Sbjct: 137 WAAFPPDVAGNVDYKNICYVIT 158
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 14/154 (9%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLT-PTEAELLDLIREIDVN 59
+A Q + + K AF + +G G I +L + GL P +LL + +ID +
Sbjct: 45 IAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDLL--LDQIDSD 102
Query: 60 QRGTIDFPEFLTVMA--RKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGER- 116
G ID+ EFL R+L S + I AF+VFD G I EL HV+ +R
Sbjct: 103 GSGNIDYTEFLAAAIDRRQL----SKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRG 158
Query: 117 -LSEDEVNE---MIQEADINGDGRINYEDFVTLM 146
++E +VN+ MI+E D NGDG+I++ +F +M
Sbjct: 159 NITERDVNQVKKMIREVDKNGDGKIDFYEFSEMM 192
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRF 39
+TE +N K+ ++ GDG+I +E +M+
Sbjct: 160 ITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMKL 194
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
LT E+ ++KEAF F++ D ++ ELGTVMR LG PT+ ++ +++++ D + G
Sbjct: 8 LTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKF 67
Query: 65 DFPEFLTVM 73
D FLT+M
Sbjct: 68 DQETFLTIM 76
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 46/72 (63%)
Query: 75 RKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGD 134
+K+ T + +E K+AFQ+FDK + A+EL VM LG ++ +++E++++ D +
Sbjct: 5 KKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNS 64
Query: 135 GRINYEDFVTLM 146
G+ + E F+T+M
Sbjct: 65 GKFDQETFLTIM 76
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 46/67 (68%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYED 141
S EE+ F++FDK+ GYI DEL+ ++ GE ++ED++ E++++ D N DGRI+Y++
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 142 FVTLMTS 148
F+ M
Sbjct: 64 FLEFMKG 70
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
+EE+++D F F++ DG I + EL +++ G T TE ++ +L+++ D N G ID
Sbjct: 4 SEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 60
Query: 66 FPEFLTVM 73
+ EFL M
Sbjct: 61 YDEFLEFM 68
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
L E+I + +EAF F++ DG I +LG MR +G PTE EL++L ++I++N G
Sbjct: 3 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 62
Query: 64 IDFPEFLTVMARKL 77
+DF +F+ +M KL
Sbjct: 63 VDFDDFVELMGPKL 76
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 80 PDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINY 139
P+ EE+++AF+ FDK K GYI +L + M T+G +E E+ E+ Q+ ++N G +++
Sbjct: 6 PEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDF 65
Query: 140 EDFVTLM 146
+DFV LM
Sbjct: 66 DDFVELM 72
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%)
Query: 75 RKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGD 134
+K++ D+ EEI +AF++FD + G I L+ V LGE L+++E+ EMI EAD +GD
Sbjct: 2 QKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGD 61
Query: 135 GRINYEDFVTLM 146
G ++ ++F+ +M
Sbjct: 62 GEVSEQEFLRIM 73
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M+++ T+E+I +AF F+ G+I L V + LG T+ EL ++I E D +
Sbjct: 4 MSEKDTKEEIL---KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 61 RGTIDFPEFLTVMAR 75
G + EFL +M +
Sbjct: 61 DGEVSEQEFLRIMKK 75
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 7 EEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLD-LIREIDVNQRGTID 65
+ QI DFKEAF+ ++ DG I +L +G + E LD +I+E G I+
Sbjct: 8 QTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPIN 63
Query: 66 FPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEM 125
F FLT+ KL D + I AF+V D +G I L ++TT +R + +E+ M
Sbjct: 64 FTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNM 123
Query: 126 IQEADINGDGRINYEDFVTLMT 147
+ G ++Y++ ++T
Sbjct: 124 WAAFPPDVAGNVDYKNICYVIT 145
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 19/160 (11%)
Query: 1 MADQLTE-EQINDFKEAFSFFNRQGDGRIPIHEL-----------GTVMRFLGLTPTEAE 48
M +LT E+ + + F + GDG++ EL G + L + EAE
Sbjct: 303 MGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAE 362
Query: 49 LLDLIREIDVNQRGTIDFPEFLTV-MARKLNTPDSTEEIKQAFQVFDKHKQGYICADELR 107
+ +++ +D ++ G I++ EF+TV M ++L S E + AFQ FD G I +EL
Sbjct: 363 VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLL--SRERLLAAFQQFDSDGSGKITNEELG 420
Query: 108 HVMTTLGERLSEDEV-NEMIQEADINGDGRINYEDFVTLM 146
+ G +DE ++++QE D N DG +++E+FV +M
Sbjct: 421 RL---FGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMM 457
Score = 37.4 bits (85), Expect = 0.003, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 16 AFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELL-DLIREIDVNQRGTIDFPEFLTVMA 74
AF F+ G G+I ELG R G+T + E +++E D N G +DF EF+ +M
Sbjct: 402 AFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 458
Query: 75 R 75
+
Sbjct: 459 K 459
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 46/67 (68%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYED 141
S EE+ F++FDK+ GYI +EL+ ++ GE ++ED++ E++++ D N DGRI+Y++
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 142 FVTLMTS 148
F+ M
Sbjct: 65 FLEFMKG 71
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
+EE+++D F F++ DG I + EL +++ G T TE ++ +L+++ D N G ID
Sbjct: 5 SEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 61
Query: 66 FPEFLTVM 73
+ EFL M
Sbjct: 62 YDEFLEFM 69
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYED 141
S EE+ F++FDK+ GYI +EL+ ++ GE ++ED++ E++++ D N DGRI+Y++
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 142 FVTLM 146
F+ M
Sbjct: 63 FLEFM 67
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
+EE+++D F F++ DG I + EL +++ G T TE ++ +L+++ D N G ID
Sbjct: 3 SEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 59
Query: 66 FPEFLTVM 73
+ EFL M
Sbjct: 60 YDEFLEFM 67
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%)
Query: 81 DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYE 140
DS EEI +AF++FD G I +LR V LGE L+E+E+ EMI EAD N D I+ +
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
Query: 141 DFVTLM 146
+F+ +M
Sbjct: 66 EFIRIM 71
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYED 141
+ EE+ F++FDK+ GYI +EL+ ++ GE ++ED++ E++++ D N DGRI+Y++
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 142 FVTLM 146
F+ M
Sbjct: 68 FLEFM 72
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
TEE+++D F F++ DG I + EL +++ G T TE ++ +L+++ D N G ID
Sbjct: 8 TEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 64
Query: 66 FPEFLTVM 73
+ EFL M
Sbjct: 65 YDEFLEFM 72
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 45/62 (72%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYED 141
TE+ +AFQVFDK G + +LR+++T LGE+L++ EV+E+++ +++ +G I+Y+
Sbjct: 3 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKK 62
Query: 142 FV 143
F+
Sbjct: 63 FI 64
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 43/68 (63%)
Query: 9 QINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPE 68
+ DF +AF F+++ G++ + +L ++ LG T+AE+ +L++ ++V+ G ID+ +
Sbjct: 3 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKK 62
Query: 69 FLTVMARK 76
F+ + R+
Sbjct: 63 FIEDVLRQ 70
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 45/65 (69%)
Query: 84 EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFV 143
+E+++AF+++DK GYI D +R ++ L E LS ++++ MI E D +G G +++E+F+
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
Query: 144 TLMTS 148
+MT
Sbjct: 63 GVMTG 67
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 13 FKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFLTV 72
+EAF ++++G+G I + ++ L T + +L +I EID + GT+DF EF+ V
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGV 64
Query: 73 M 73
M
Sbjct: 65 M 65
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
+A L + +IN+ + F + G + E+ ++ +G ++ ++R+ID N
Sbjct: 47 IAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNA 106
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTT--LGERLS 118
G I + +FL K T E F+ FD G I +EL+ + + L
Sbjct: 107 SGQIHYTDFLAATIDK-QTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLI 165
Query: 119 EDEVNEMIQEADINGDGRINYEDFVTLMT 147
+ ++ ++QE D+NGDG I++ +F+ +M+
Sbjct: 166 DKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 17 FSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLD-----LIREIDVNQRGTIDFPEFLT 71
F FF+ G+G+I + EL R G E L+D L++E+D+N G IDF EF+
Sbjct: 135 FKFFDIDGNGKISVEELK---RIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFML 191
Query: 72 VMARK 76
+M++K
Sbjct: 192 MMSKK 196
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYED 141
+ EE+ F++FDK+ GYI +EL+ ++ GE ++ED++ E++++ D N DGRI+Y++
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
Query: 142 FVTLM 146
F+ M
Sbjct: 73 FLEFM 77
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTID 65
TEE+++D F F++ DG I + EL +++ G T TE ++ +L+++ D N G ID
Sbjct: 13 TEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 69
Query: 66 FPEFLTVM 73
+ EFL M
Sbjct: 70 YDEFLEFM 77
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%)
Query: 5 LTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTI 64
L+EEQ + KEAF F+ G I HEL MR LG + E+L+L+ E D G I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 65 DFPEFLTVMARKLNTPD 81
F +FL +M K+ D
Sbjct: 61 GFDDFLDIMTEKIKNRD 77
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
+ + +EIK+AF +FD +K G I EL+ M LG + + E+ E++ E D G+G I
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIG 61
Query: 139 YEDFVTLMT 147
++DF+ +MT
Sbjct: 62 FDDFLDIMT 70
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 57 DVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
D N+ G+ID+ E L V R L EI + +D+ GYI D+ +MT
Sbjct: 17 DTNKTGSIDYHE-LKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMT 70
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 1 MADQLTE-EQINDFKEAFSFFNRQGDGRIPIHEL----GTVMRFLGLTPT-------EAE 48
M +LT E+ + + F + GDG++ EL +M++ G T + EAE
Sbjct: 29 MGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAE 88
Query: 49 LLDLIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRH 108
+ +++ +D ++ G I++ EF+TV K S E + AFQ FD G I +EL
Sbjct: 89 VDHILQSVDFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITNEELGR 147
Query: 109 VMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
+ + ++ ++++QE D N DG +++E+FV +M
Sbjct: 148 LFGVT--EVDDETWHQVLQECDKNNDGEVDFEEFVEMM 183
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 16 AFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELL-DLIREIDVNQRGTIDFPEFLTVMA 74
AF F+ G G+I ELG R G+T + E +++E D N G +DF EF+ +M
Sbjct: 128 AFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 184
Query: 75 R 75
+
Sbjct: 185 K 185
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
A +++EQ+N+F+ +F+ F+R+ G + + + +G EAE ++ +D N+
Sbjct: 716 AKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRM 775
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELR 107
G + F F+ M+R+ D+ +++ +F++ K YI DELR
Sbjct: 776 GVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK-NYITVDELR 820
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTL-GERLSEDEVNEMIQEADINGDGRINYE 140
+E++ AF+ FD + G I ELR M L G ++ ++ E+I++ D+NGDGR+++E
Sbjct: 5 GVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFE 64
Query: 141 DFVTLMT 147
+FV +M+
Sbjct: 65 EFVRMMS 71
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGTVMR-FLGLTPTEAELLDLIREIDVNQRGTIDFPE 68
+ + ++AF F+ GDG I EL MR LG ++ ++IR++D+N G +DF E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 69 FLTVMAR 75
F+ +M+R
Sbjct: 66 FVRMMSR 72
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 46/65 (70%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYED 141
S EE+ F++FDK+ G+I +EL ++ GE + E+++ ++++++D N DGRI++++
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 142 FVTLM 146
F+ +M
Sbjct: 68 FLKMM 72
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 16 AFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFLTVM 73
F F++ DG I I ELG ++R G E ++ DL+++ D N G IDF EFL +M
Sbjct: 15 CFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 72
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 67/128 (52%), Gaps = 12/128 (9%)
Query: 19 FFNRQGDGRIPIHELGTVMRFLGLTPT---EAELLDLIREIDVNQRGTIDFPEFLTVMAR 75
F + +G++ I + R LGL P+ E ++ DL + ++ + ++L +
Sbjct: 4 FNTKSSNGKLRIEDASHNARKLGLAPSSTDEKKIRDLYGD-------SLTYEQYLEYLTX 56
Query: 76 KLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDG 135
++ D+ EE+ + F FD + G++ ++ ++++TT G+ L+E E N+ + + +
Sbjct: 57 CVHDRDNXEELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEANDALNA--FSSED 114
Query: 136 RINYEDFV 143
RINY+ F
Sbjct: 115 RINYKLFC 122
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M ++I + F + G + + E ++ L P ++D+ D +
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPE-LQQNPLVQRVIDIF---DTDG 66
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL-GERLSE 119
G +DF EF+ +++ D ++++ AF+++D K GYI EL V+ + G L +
Sbjct: 67 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 126
Query: 120 DEVNEMIQE----ADINGDGRINYEDFVTLM 146
++ +++ + AD +GDGRI++E+F ++
Sbjct: 127 TQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
M ++I + F + G + + E ++ L P ++D+ D +
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPE-LQQNPLVQRVIDIF---DTDG 65
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL-GERLSE 119
G +DF EF+ +++ D ++++ AF+++D K GYI EL V+ + G L +
Sbjct: 66 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 125
Query: 120 DEVNEMIQE----ADINGDGRINYEDFVTLM 146
++ +++ + AD +GDGRI++E+F ++
Sbjct: 126 TQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 6/70 (8%)
Query: 82 STEEIKQAFQVFDKHKQG---YICADELRHVMTTLGERLSE--DEVNEMIQEADINGDGR 136
S EEIK AF+VF K+G I +EL+ VM TLG L + ++EMI+E D NGDG
Sbjct: 3 SPEEIKGAFEVF-AAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 137 INYEDFVTLM 146
+++E+F+ +M
Sbjct: 62 VSFEEFLVMM 71
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 12 DFKEAFSFFN-RQGD-GRIPIHELGTVMRFLG--LTPTEAELLDLIREIDVNQRGTIDFP 67
+ K AF F ++GD +I EL VM+ LG L + L ++I E+D N G + F
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65
Query: 68 EFLTVMAR 75
EFL +M +
Sbjct: 66 EFLVMMKK 73
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLT-PTEAELLDLIREIDVN 59
+A Q + + K F + G G I +L + GL P +LL + +ID +
Sbjct: 42 IAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLL--LDQIDSD 99
Query: 60 QRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGER--L 117
G ID+ EF+ + S + I AF+VFD G I EL H++ ++ +
Sbjct: 100 GSGKIDYTEFIAAALDRKQL--SKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNI 157
Query: 118 SEDEVNE---MIQEADINGDGRINYEDFVTLM 146
++ +VN MI++ D N DG+I++ +F +M
Sbjct: 158 TQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMM 189
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 57 DVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL-GE 115
D + G +DF EF+ +++ D ++++ AF+++D K GYI EL V+ + G
Sbjct: 48 DTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 107
Query: 116 RLSEDEVNEMIQE----ADINGDGRINYEDFVTLM 146
L + ++ +++ + AD +GDGRI++E+F ++
Sbjct: 108 NLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 142
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 57 DVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL-GE 115
D + G +DF EF+ +++ D ++++ AF+++D K GYI EL V+ + G
Sbjct: 49 DTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 108
Query: 116 RLSEDEVNEMIQE----ADINGDGRINYEDFVTLM 146
L + ++ +++ + AD +GDGRI++E+F ++
Sbjct: 109 NLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 143
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQ 60
MA++L+EE+I KE F + G I EL ++ +G E+E+ DL+ D+++
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 61 RGTIDFPEFLTV 72
GTID+ EF+
Sbjct: 73 SGTIDYGEFIAA 84
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 73 MARKLNTPDSTEEI---KQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEA 129
MA +L S EEI K+ F++ D G I DEL+ + +G L E E+ +++ A
Sbjct: 13 MAERL----SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAA 68
Query: 130 DINGDGRINYEDFVT 144
DI+ G I+Y +F+
Sbjct: 69 DIDKSGTIDYGEFIA 83
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 81 DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGER-LSEDEVNEMIQEADINGDGRINY 139
D EEI +AF+VFD + G I DE + +M +GE L++ EV E ++EAD +G+G I+
Sbjct: 5 DDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDI 64
Query: 140 EDFVTLMTS 148
+F+ L+
Sbjct: 65 PEFMDLIKK 73
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 16 AFSFFNRQGDGRIPIHELGTVMRFLGLTP-TEAELLDLIREIDVNQRGTIDFPEFLTVMA 74
AF F+ GDG I E +M+ +G P T+AE+ + ++E D + G ID PEF+ ++
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 72
Query: 75 RKLNT 79
+ N
Sbjct: 73 KSKNA 77
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 46 EAELLDLIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADE 105
E E+L + D N G IDF EF +M + P + E+++A + D+ G I E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 106 LRHVMTTLGERLSE 119
++ L E
Sbjct: 67 FMDLIKKSKNALKE 80
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 1 MADQLT-EEQINDFKEAFSFFNRQGDGRIPIHEL----GTVMRFLG-------LTPTEAE 48
M +LT +++ + F ++ GDG++ EL +MR G + E E
Sbjct: 324 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 383
Query: 49 LLDLIREIDVNQRGTIDFPEFLTV-MARKLNTPDSTEEIKQAFQVFDKHKQGYICADELR 107
+ ++ +D ++ G I++ EF+TV M RK T S E +++AF++FD G I + EL
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFVTVAMDRK--TLLSRERLERAFRMFDSDNSGKISSTELA 441
Query: 108 HVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
+ + + ++ E D N DG +++++F ++
Sbjct: 442 TIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 70 LTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADEL----RHVMTTLGERLS------- 118
L M KL + D T+E+ F DK+ G + EL + +M G+ S
Sbjct: 321 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 380
Query: 119 EDEVNEMIQEADINGDGRINYEDFVTL 145
E EV++++ D + +G I Y +FVT+
Sbjct: 381 EHEVDQVLDAVDFDKNGYIEYSEFVTV 407
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 16 AFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELL-DLIREIDVNQRGTIDFPEFLTVMA 74
AF F+ G+I EL T+ G++ ++E ++ E+D N G +DF EF ++
Sbjct: 423 AFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
Query: 75 R 75
+
Sbjct: 480 K 480
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 1 MADQLT-EEQINDFKEAFSFFNRQGDGRIPIHEL----GTVMRFLG-------LTPTEAE 48
M +LT +++ + F ++ GDG++ EL +MR G + E E
Sbjct: 347 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 406
Query: 49 LLDLIREIDVNQRGTIDFPEFLTV-MARKLNTPDSTEEIKQAFQVFDKHKQGYICADELR 107
+ ++ +D ++ G I++ EF+TV M RK T S E +++AF++FD G I + EL
Sbjct: 407 VDQVLDAVDFDKNGYIEYSEFVTVAMDRK--TLLSRERLERAFRMFDSDNSGKISSTELA 464
Query: 108 HVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
+ + + ++ E D N DG +++++F ++
Sbjct: 465 TIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 70 LTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADEL----RHVMTTLGERLS------- 118
L M KL + D T+E+ F DK+ G + EL + +M G+ S
Sbjct: 344 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 403
Query: 119 EDEVNEMIQEADINGDGRINYEDFVTL 145
E EV++++ D + +G I Y +FVT+
Sbjct: 404 EHEVDQVLDAVDFDKNGYIEYSEFVTV 430
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 16 AFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELL-DLIREIDVNQRGTIDFPEFLTVMA 74
AF F+ G+I EL T+ G++ ++E ++ E+D N G +DF EF ++
Sbjct: 446 AFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 502
Query: 75 R 75
+
Sbjct: 503 K 503
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 1 MADQLT-EEQINDFKEAFSFFNRQGDGRIPIHEL----GTVMRFLG-------LTPTEAE 48
M +LT +++ + F ++ GDG++ EL +MR G + E E
Sbjct: 348 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 407
Query: 49 LLDLIREIDVNQRGTIDFPEFLTV-MARKLNTPDSTEEIKQAFQVFDKHKQGYICADELR 107
+ ++ +D ++ G I++ EF+TV M RK T S E +++AF++FD G I + EL
Sbjct: 408 VDQVLDAVDFDKNGYIEYSEFVTVAMDRK--TLLSRERLERAFRMFDSDNSGKISSTELA 465
Query: 108 HVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
+ + + ++ E D N DG +++++F ++
Sbjct: 466 TIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 70 LTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADEL----RHVMTTLGERLS------- 118
L M KL + D T+E+ F DK+ G + EL + +M G+ S
Sbjct: 345 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 404
Query: 119 EDEVNEMIQEADINGDGRINYEDFVTL 145
E EV++++ D + +G I Y +FVT+
Sbjct: 405 EHEVDQVLDAVDFDKNGYIEYSEFVTV 431
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 16 AFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELL-DLIREIDVNQRGTIDFPEFLTVMA 74
AF F+ G+I EL T+ G++ ++E ++ E+D N G +DF EF ++
Sbjct: 447 AFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 503
Query: 75 R 75
+
Sbjct: 504 K 504
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 6 TEEQINDFKEAFSFFNRQGDGRIPIHEL-----------GTVMRFLGLTPTEAELLDLIR 54
++++ + F ++ GDG++ EL G L + E E+ ++
Sbjct: 330 SQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLD 389
Query: 55 EIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLG 114
+D ++ G I++ EF+TV A T S E +++AF+ FD G I + EL +
Sbjct: 390 AVDFDKNGYIEYSEFVTV-AXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGV-- 446
Query: 115 ERLSEDEVNEMIQEADINGDGRINYEDF 142
+ + ++ E D N DG +++++F
Sbjct: 447 SDVDSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 32.3 bits (72), Expect = 0.096, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 76 KLNTPDSTEEIKQAFQVFDKHKQGYICADEL----RHVMTTLGERLS-------EDEVNE 124
KL + D T+E+ F DK+ G + EL + + G+ S E EV++
Sbjct: 327 KLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQ 386
Query: 125 MIQEADINGDGRINYEDFVTL 145
++ D + +G I Y +FVT+
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTV 407
Score = 26.9 bits (58), Expect = 4.6, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 48 ELLDLIREIDVNQRGTIDFPEFLTVM----------ARKLNTPDSTEEIKQAFQVFDKHK 97
EL + + D N G +D E + A L+ E+ Q D K
Sbjct: 336 ELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFDK 395
Query: 98 QGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTL 145
GYI E V LS + + + D + G+I+ + T+
Sbjct: 396 NGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATI 443
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 42 LTPTEAELLDLIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYI 101
+ PTE +L E + + + L VMA K++ + E+ + F + ++ I
Sbjct: 1 MEPTEKSML---LETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLI 57
Query: 102 CADELRHVMTTLG-ERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
A+ LR LG E +S+++ M++E D++GDG +N +F LM
Sbjct: 58 TAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLM 103
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVM---TTLGERLSE 119
+ D +F ++ K + D ++K+ F + DK K G+I DEL ++ ++ LS
Sbjct: 23 SFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSA 79
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLMT 147
E ++ D +GDG+I E+F TL+
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEFSTLVA 107
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVM---TTLGERLSE 119
+ D +F ++ K + D ++K+ F + DK K G+I DEL ++ ++ LS
Sbjct: 23 SFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSA 79
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLMT 147
E ++ D +GDG+I E+F TL+
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEFSTLVA 107
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVM---TTLGERLSE 119
+ D +F ++ K + D ++K+ F + DK K G+I DEL ++ ++ LS
Sbjct: 23 SFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSA 79
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLMT 147
E ++ D +GDG+I E+F TL+
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEFSTLVA 107
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVM---TTLGERLSEDEVNEMIQEADINGDGRIN 138
S +++K+ F + DK K G+I DEL ++ ++ LS E ++ D +GDG+I
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 62
Query: 139 YEDFVTLMT 147
E+F TL+
Sbjct: 63 VEEFSTLVA 71
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 1 MADQLTE-EQINDFKEAFSFFNRQGDGRIPIHEL----GTVMRFLGL----------TPT 45
MA +LT ++ E F + DG + EL MR G+ +
Sbjct: 320 MASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTI 379
Query: 46 EAELLDLIREIDVNQRGTIDFPEFL-TVMARKLNTPDSTEEIKQAFQVFDKHKQGYICAD 104
E ++ L+ +D++ G+I++ EF+ + + R + S E +++AF++FDK G I
Sbjct: 380 EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILL--SRERMERAFKMFDKDGSGKISTK 437
Query: 105 ELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
EL + + + +E+ +I++ D N DG +++ +FV ++
Sbjct: 438 ELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 16/90 (17%)
Query: 70 LTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADEL---------------RHVMTTLG 114
L MA KL T D T+++ + F+ D + G + DEL ++ G
Sbjct: 317 LLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEG 376
Query: 115 ERLSEDEVNEMIQEADINGDGRINYEDFVT 144
+ ED+++ ++ D++G G I Y +F+
Sbjct: 377 STI-EDQIDSLMPLLDMDGSGSIEYSEFIA 405
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 11/103 (10%)
Query: 57 DVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGER 116
DV + G I+F EF+ + + E++K AF+++D + G+I +EL+ ++ L
Sbjct: 84 DVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 117 ----LSEDEVNEMIQ----EADINGDGRIN---YEDFVTLMTS 148
LSED + M+ +AD DG+I+ ++DFV+L S
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPS 186
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGT 63
Q EE++++ F + G+I I R LGL P+ + ++I
Sbjct: 8 QQLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDE----KKIKELYGDN 63
Query: 64 IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
+ + ++L ++ ++ D+ EE+ + F FD + GY+ ++++++TT G+ L++ E
Sbjct: 64 LTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEA 122
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 11/103 (10%)
Query: 57 DVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGER 116
DV + G I+F EF+ + + E++K AF+++D + G+I +EL+ ++ L
Sbjct: 84 DVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 117 ----LSEDEVNEMIQ----EADINGDGRIN---YEDFVTLMTS 148
LSED + M+ +AD DG+I+ ++DFV+L S
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPS 186
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 17 FSFFNRQGDGRIPIHELGTVMRFLGLTPTEAE-LLDLI-REIDVNQRGTIDFPEFLTVMA 74
F + GDG + E+ + P + E LL LI + ID++ G ID EF T A
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVS--SKRPIKNEQLLQLIFKAIDIDGNGEIDLAEF-TKFA 62
Query: 75 RKLNTPDSTEE---IKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADI 131
+ D ++E +K +++ D G + +E+ TT ++ ++V + I +AD
Sbjct: 63 AAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEV----TTFFKKFGYEKVVDQIMKADA 118
Query: 132 NGDGRINYEDFVTL 145
NGDG I E+F+
Sbjct: 119 NGDGYITLEEFLAF 132
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 51 DLIREID-VNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHV 109
D+ + +D V G+ + +F ++ K S ++K+ F+ D G+I +EL+ V
Sbjct: 11 DIKKALDAVKAEGSFNHKKFFALVGLKAM---SANDVKKVFKAIDADASGFIEEEELKFV 67
Query: 110 MTTL---GERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
+ + G L++ E ++ AD +GDG+I ++F TL+
Sbjct: 68 LKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLV 107
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELR---HVMTTLGERLSEDEVNEMIQEADINGDG 135
T S ++IK+AF V D+ K G+I DEL+ V + L++ E ++ D +GDG
Sbjct: 37 TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDG 96
Query: 136 RINYEDFVTLMTS 148
I +++ L+ +
Sbjct: 97 AIGVDEWAALVKA 109
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 80 PDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINY 139
P E ++ F+ FD + G I A EL + TLG ++ DEV M+ E D +GDG I++
Sbjct: 5 PQDKAERERIFKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISF 63
Query: 140 EDFV 143
++F
Sbjct: 64 QEFT 67
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 17 FSFFNRQGDGRIPIHELGTVMRFLG-LTPTEAELLDLIREIDVNQRGTIDFPEF 69
F F+ GDG+I ELG ++ LG +TP E + ++ EID + G I F EF
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGSITPDEVK--HMMAEIDTDGDGFISFQEF 66
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL---GERLSEDEVNEMIQEADINGDG 135
T S +++K+AF + D+ K G+I DEL+ + L++ E ++ D +GDG
Sbjct: 37 TSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDG 96
Query: 136 RINYEDFVTLMTS 148
+I ++F L+ +
Sbjct: 97 KIGVDEFTALVKA 109
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVM---TTLGERLSE 119
+ D +F ++ K + D ++K+ F + DK K G+I DEL ++ ++ LS
Sbjct: 23 SFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSA 79
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLMT 147
E ++ D +G G+I E+F TL+
Sbjct: 80 KETKTLMAAGDKDGSGKIEVEEFSTLVA 107
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 78 NTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
+TP + ++ F+ FD + G I + EL + TLG ++ DEV M+ E D +GDG I
Sbjct: 5 DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFI 63
Query: 138 NYEDFV 143
++++F
Sbjct: 64 SFDEFT 69
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 1 MADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLG-LTPTEAELLDLIREIDVN 59
MA + T + I D + F F+ GDG+I ELG ++ LG +TP E ++ EID +
Sbjct: 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRR--MMAEIDTD 58
Query: 60 QRGTIDFPEF 69
G I F EF
Sbjct: 59 GDGFISFDEF 68
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVM-RFLGLTPTEAELLDLIREIDVNQRG 62
+ TEE+++ + + SF GRI E T+ +F +A + R D N G
Sbjct: 21 KFTEEELSSWYQ--SFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG 78
Query: 63 TIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
T+DF E+ V+A + + T ++++ AF ++D G I +E+ ++T + + +S ++
Sbjct: 79 TLDFKEY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED 136
Query: 122 VNEM 125
+
Sbjct: 137 TKHL 140
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 17 FSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFLTVMAR- 75
F+ F++ +G I E TV+ E +L D+N G I F E LT++A
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128
Query: 76 --------KLNTPDSTEE--IKQAFQVFDKHKQGYICADELR 107
LN ++T E +K+ F++ DK++ GYI DE R
Sbjct: 129 YKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 17/105 (16%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDST--EEIKQAFQVFDKHKQGYICADELRHV 109
L D + G I F EF+TV++ T T E++ AF+++D + GYI DE+ +
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVLS---TTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124
Query: 110 MTTLGE------RLSEDE------VNEMIQEADINGDGRINYEDF 142
+ ++ + L+EDE V ++ + D N DG I ++F
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 90 FQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLMTS 148
F VFDK G+I +E V++T E++++ + D+N DG I +++ +T++ S
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVM-RFLGLTPTEAELLDLIREIDVNQRG 62
+ TEE+++ + + SF GRI E T+ +F +A + R D N G
Sbjct: 22 KFTEEELSSWYQ--SFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG 79
Query: 63 TIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
T+DF E+ V+A + + T ++++ AF ++D G I +E+ ++T + + +S ++
Sbjct: 80 TLDFKEY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED 137
Query: 122 VNEM 125
+
Sbjct: 138 TKHL 141
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVM-RFLGLTPTEAELLDLIREIDVNQRG 62
+ TEE+++ + + SF GRI E T+ +F +A + R D N G
Sbjct: 21 KFTEEELSSWYQ--SFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG 78
Query: 63 TIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
T+DF E+ V+A + + T ++++ AF ++D G I +E+ ++T + + +S ++
Sbjct: 79 TLDFKEY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED 136
Query: 122 VNEM 125
+
Sbjct: 137 TKHL 140
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVM-RFLGLTPTEAELLDLIREIDVNQRG 62
+ TEE+++ + + SF GRI E T+ +F +A + R D N G
Sbjct: 21 KFTEEELSSWYQ--SFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG 78
Query: 63 TIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
T+DF E+ V+A + + T ++++ AF ++D G I +E+ ++T + + +S ++
Sbjct: 79 TLDFKEY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED 136
Query: 122 VNEM 125
+
Sbjct: 137 TKHL 140
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 26 GRIPIHELGTVMRFLGLTPTEAELLDLIRE-IDVNQRGTIDFPEFLTVMARKLNTPDSTE 84
G++ ++E L+P+ + ++ + E D N+ G IDF E++ ++ L +
Sbjct: 30 GQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGK-VDQ 88
Query: 85 EIKQAFQVFDKHKQGYICADELRHVMTTL------GERLSEDEVNEMI-QEADINGDGRI 137
+++ F+++D G I EL +++ + E ++ +E M+ + DINGDG +
Sbjct: 89 KLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGEL 148
Query: 138 NYEDFV 143
+ E+F+
Sbjct: 149 SLEEFM 154
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 43/87 (49%)
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
G + EF K +P + + ++Q F+ FD +K GYI E ++ + + + +
Sbjct: 30 GQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQK 89
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
+ + D++G+G I+ + + ++ +
Sbjct: 90 LRWYFKLYDVDGNGCIDRGELLNIIKA 116
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Query: 85 EIKQAFQVFDKHKQGYICADELRHVMTTLG--ERLSEDEVNE----MIQEADINGDGRIN 138
E++ AF+ D + GY+ A EL+ M TL + LS+D+V E +I+ AD N DG+I+
Sbjct: 8 ELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKIS 67
Query: 139 YEDFV 143
E+F+
Sbjct: 68 KEEFL 72
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGER---LSE 119
+ ++ F + + TPD +IK+ F + D+ K G+I +EL+ + L+
Sbjct: 23 SFNYKSFFSTVGLSSKTPD---QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTS 79
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLM 146
E + D +GDG+I E+F +L+
Sbjct: 80 AETKAFLAAGDTDGDGKIGVEEFQSLV 106
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 36/60 (60%)
Query: 87 KQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
K+ F+ FDK+K G + DE R V +++++ + +E D++G+G +N ++F + +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 14 KEAFSFFNRQGDGRIPIHELGTVMRFLGLTP--TEAELLDLIREIDVNQRGTIDFPEFLT 71
K F F++ DG++ + E V L +P T+ +++ EIDV+ G ++ EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVA--LAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
Query: 72 VMARKL 77
+ + L
Sbjct: 62 CIEKML 67
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGER---LSE 119
+ ++ F + + TPD +IK+ F + D+ K G+I +EL+ + L+
Sbjct: 24 SFNYKSFFSTVGLSSKTPD---QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTS 80
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLM 146
E + D +GDG+I E+F +L+
Sbjct: 81 AETKAFLAAGDTDGDGKIGVEEFQSLV 107
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL---GERLSE 119
+ D +F ++ K + D ++K+ F + DK K G+I DEL ++ LS
Sbjct: 24 SFDHKKFFQMVGLKKKSAD---DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSA 80
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLMT 147
E ++ D +GDG+I ++F TL+
Sbjct: 81 KETKMLMAAGDKDGDGKIGVDEFSTLVA 108
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 41 GLTPTEAELLDL-IREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQG 99
G P E L + +D + GT+ F EF + A LN +Q F FD + G
Sbjct: 66 GYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWA-VLNG------WRQHFISFDTDRSG 118
Query: 100 YICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTL 145
+ EL+ +TT+G RLS VN + + N G+I ++D++
Sbjct: 119 TVDPQELQKALTTMGFRLSPQAVNSIAKRYSTN--GKITFDDYIAC 162
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 21/108 (19%)
Query: 52 LIREIDVNQRGTIDFPEF---LTVMAR-KLNTPDSTEEIKQAFQVFDKHKQGYICADELR 107
+ R D N GTIDF EF L+V +R KL +++K AF ++D GYI E+
Sbjct: 68 VFRTFDANGDGTIDFREFIIALSVTSRGKLE-----QKLKWAFSMYDLDGNGYISKAEML 122
Query: 108 HVMTTLGE------RLSEDE------VNEMIQEADINGDGRINYEDFV 143
++ + + ++ EDE ++ ++ D N DG+++ E+F+
Sbjct: 123 EIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFI 170
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 83 TEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDF 142
+++++ F+ FD + G I EL + TLG S DEV M+ E D +GDG I++ +F
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEF 60
Query: 143 VTLMTS 148
++ +
Sbjct: 61 ISFCNA 66
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 11 NDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFL 70
+D + F F+ GDG+I + EL +R LG T + E+ ++ EID + G IDF EF+
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFI 61
Query: 71 T 71
+
Sbjct: 62 S 62
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 83 TEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDF 142
+++++ F+ FD + G I EL + TLG S DEV M+ E D +GDG I++ +F
Sbjct: 1 ADDMERIFKRFDTNGDGKISLSELTDALRTLGS-TSADEVQRMMAEIDTDGDGFIDFNEF 59
Query: 143 VTLMTS 148
++ +
Sbjct: 60 ISFCNA 65
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 11 NDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFL 70
+D + F F+ GDG+I + EL +R LG T + E+ ++ EID + G IDF EF+
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFI 60
Query: 71 T 71
+
Sbjct: 61 S 61
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 26 GRIPIHELGTVMRFLGLTPTEAELLDLIRE-IDVNQRGTIDFPEFLT----VMARKLNTP 80
G +HE T++ GL + +D + D N+ G +DF EF+ +M K+
Sbjct: 35 GLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKME-- 92
Query: 81 DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLG-----ERLSEDE-VNEMIQEADINGD 134
+++K F+++D G I +EL + + + LS +E +N + + DIN D
Sbjct: 93 ---QKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINND 149
Query: 135 GRINYEDFVTLMT 147
G + E+F+ M
Sbjct: 150 GELTLEEFINGMA 162
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 13 FKEAFSFFNRQGDGRIPIHEL-GTVMRFLGL----TPTEAELLDLI-REIDVNQRGTIDF 66
K F ++ G+G I +EL M L T + E ++L+ +ID+N G +
Sbjct: 95 LKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTL 154
Query: 67 PEFLTVMAR 75
EF+ MA+
Sbjct: 155 EEFINGMAK 163
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELR---HVMTTLGERLSEDEVNEMIQEADINGDG 135
+ S ++IK+AF D+ K G+I DEL+ V L++ E ++ D +GDG
Sbjct: 37 SGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDG 96
Query: 136 RINYEDFVTLMTS 148
I E++V L+ +
Sbjct: 97 AIGVEEWVALVKA 109
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELR---HVMTTLGERLSEDEVNEMIQEADINGDG 135
+ S ++IK+AF D+ K G+I DEL+ V L++ E ++ D +GDG
Sbjct: 36 SGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDG 95
Query: 136 RINYEDFVTLMTS 148
I E++V L+ +
Sbjct: 96 AIGVEEWVALVKA 108
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVM-RFLGLTPTEAELLDLIREIDVNQRG 62
+ TEE+++ + + SF GRI E T+ +F +A + R D N G
Sbjct: 21 KFTEEELSSWYQ--SFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG 78
Query: 63 TIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
T+DF ++ V+A + + T ++++ AF ++D G I +E+ ++T + + +S ++
Sbjct: 79 TLDFKQY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED 136
Query: 122 VNEM 125
+
Sbjct: 137 TKHL 140
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL---GERLSEDEVNEMIQEADINGDG 135
T S +++K+AF + D+ K G+I DEL+ + L++ E ++ D +GDG
Sbjct: 36 TSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDG 95
Query: 136 RINYEDFVTLMTS 148
+I +++ L+ +
Sbjct: 96 KIGVDEWTALVKA 108
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVM-RFLGLTPTEAELLDLIREIDVNQRG 62
+ TEE+++ + + SF GRI E T+ +F +A + R D N G
Sbjct: 21 KFTEEELSSWYQ--SFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG 78
Query: 63 TIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
T+DF ++ V+A + + T ++++ AF ++D G I +E+ ++T + + +S ++
Sbjct: 79 TLDFKQY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED 136
Query: 122 VNEM 125
+
Sbjct: 137 TKHL 140
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVM---TTLGERLS 118
GT D+ F ++ K T ++K+ F++ DK + G+I +EL+ V+ + G L+
Sbjct: 22 GTFDYKRFFHLVGLKGKT---DAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN 78
Query: 119 EDEVNEMIQEADINGDGRINYEDFVTLMT 147
+ E ++ D + DG+I ++F ++
Sbjct: 79 DTETKALLAAGDSDHDGKIGADEFAKMVA 107
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 10/143 (6%)
Query: 6 TEEQINDFKEAFSFF---NRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRG 62
+ +ND +E +F + G G I + EL + G+ + A L+ D N G
Sbjct: 19 SARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSG 78
Query: 63 TIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEV 122
I F EF + L+ +++ F+ D G + ++E+R + + G ++SE
Sbjct: 79 EITFDEFKDLHHFILS-------MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTF 131
Query: 123 NEMIQEADINGDGRINYEDFVTL 145
++++ D G + ++D+V L
Sbjct: 132 QALMRKFDRQRRGSLGFDDYVEL 154
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEF 69
I +E F + GDGR+ +E+ + G +E L+R+ D +RG++ F ++
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151
Query: 70 --LTVMARKLNTPDSTEEIKQAFQVFDKHKQGYI 101
L++ + ++ F +D+ + G +
Sbjct: 152 VELSIFVCR---------VRNVFAFYDRERTGQV 176
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL---GERLSEDEVNEMIQEADINGDG 135
T S +++K+AF + + K G+I DEL+ + L++ E ++ D +GDG
Sbjct: 36 TSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDG 95
Query: 136 RINYEDFVTLMTS 148
+I +D+ L+ +
Sbjct: 96 KIGVDDWTALVKA 108
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEF 69
I F +R G + E + LGL +AE + R+ D N GT+D EF
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 70 LTVMARKLNTPDSTEE---IKQAFQVFDKHKQGYICADELRHVMT 111
L R L P S I AF D+ G + D+LR V +
Sbjct: 96 L----RALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYS 136
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 90 FQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
F+ D+ + ADE R + LG L + E + ++ D NG G ++ E+F+ +
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRAL 99
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 26 GRIPIHELGTVMRFLGLTP-TEAELLDLIREIDVNQRGTIDFPEFLTVMARKLNTPDSTE 84
G I +EL + TP + +I D + ++F EF V
Sbjct: 41 GVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK-------YIT 93
Query: 85 EIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFV 143
+ + F+ +D+ G I +EL+ ++ G RLS+ + +I++ D G G+I ++DF+
Sbjct: 94 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 152
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+D+ ++ FKE + F+ G+G I I L ++ LG+ T EL LI E+
Sbjct: 23 SDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSG 82
Query: 62 GTIDFPEFLTVMARK 76
T +P+FL +M K
Sbjct: 83 ETFSYPDFLRMMLGK 97
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 41 GLTPTEAELLDL-IREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQG 99
G P E L + +D + GT+ F EF + A LN +Q F D + G
Sbjct: 66 GYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWA-VLNG------WRQHFISLDTDRSG 118
Query: 100 YICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTL 145
+ EL+ +TT+G RLS VN + + N G+I ++D++
Sbjct: 119 TVDPQELQKALTTMGFRLSPQAVNSIAKRYSTN--GKITFDDYIAC 162
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
+I D + ++F EF V + + F+ +D+ G I +EL+ ++
Sbjct: 49 IISMFDRENKAGVNFSEFTGVWK-------YITDWQNVFRTYDRDNSGMIDKNELKQALS 101
Query: 112 TLGERLSEDEVNEMIQEADINGDGRINYEDFV 143
G RLS+ + +I++ D G G+I ++DF+
Sbjct: 102 GFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 133
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
+I D + ++F EF V + + F+ +D+ G I +EL+ ++
Sbjct: 46 IISMFDRENKAGVNFSEFTGVWK-------YITDWQNVFRTYDRDNSGMIDKNELKQALS 98
Query: 112 TLGERLSEDEVNEMIQEADINGDGRINYEDFV 143
G RLS+ + +I++ D G G+I ++DF+
Sbjct: 99 GFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 130
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
+I D + ++F EF V + + F+ +D+ G I +EL+ ++
Sbjct: 67 IISMFDRENKAGVNFSEFTGVWK-------YITDWQNVFRTYDRDNSGMIDKNELKQALS 119
Query: 112 TLGERLSEDEVNEMIQEADINGDGRINYEDFV 143
G RLS+ + +I++ D G G+I ++DF+
Sbjct: 120 GFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 151
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Query: 57 DVNQRGTIDFPEFLTVMARKLNT--PDST--EEIKQAFQVFDKHKQGYICADELRH-VMT 111
D G + F EF AR L+ P++ ++I +FQ++D +QG+I E++ V+
Sbjct: 64 DTKHNGILGFEEF----ARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVA 119
Query: 112 TLGER-------LSEDEVNEMIQEADINGDGRINYEDFVTLM 146
TL E + ED +++ +EAD DG+I+ E++ +L+
Sbjct: 120 TLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV 161
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
+I D + ++F EF V + + F+ +D+ G I +EL+ ++
Sbjct: 45 IISMFDRENKAGVNFSEFTGVWK-------YITDWQNVFRTYDRDNSGMIDKNELKQALS 97
Query: 112 TLGERLSEDEVNEMIQEADINGDGRINYEDFV 143
G RLS+ + +I++ D G G+I ++DF+
Sbjct: 98 GFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 129
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTL--GER-LSEDEVNEMIQEADINGDGRIN 138
S+ ++K+ F++ D + G+I DEL++ + G R L+ E + AD +GDG+I
Sbjct: 39 SSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIG 98
Query: 139 YEDFVTLMTS 148
E+F ++ S
Sbjct: 99 AEEFQEMVQS 108
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 2 ADQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
+D+ ++ FKE + F+ G+G I I L ++ LG+ T EL LI E+
Sbjct: 42 SDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSG 101
Query: 62 GTIDFPEFLTVMARK 76
T +P+FL +M K
Sbjct: 102 ETFSYPDFLRMMLGK 116
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTL---GERLSEDEVNEMIQEADINGDGRIN 138
S +++K+AF V D+ K G+I DEL+ + L++ E + + D +GDG I
Sbjct: 39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIG 98
Query: 139 YEDFVTLMTS 148
++F ++ +
Sbjct: 99 VDEFAAMIKA 108
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTL---GERLSEDEVNEMIQEADINGDGRIN 138
S ++K F+ D + GY+ DEL++ + L+E E ++ AD +GDG+I
Sbjct: 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIG 98
Query: 139 YEDFVTLMTS 148
++F ++ S
Sbjct: 99 ADEFQEMVHS 108
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 79 TPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL---GERLSEDEVNEMIQEADINGDG 135
T S +++K+AF + + K G+I DEL+ + L++ E ++ D +GDG
Sbjct: 36 TSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDG 95
Query: 136 RINYEDFVTLMTS 148
+I +++ L+ +
Sbjct: 96 KIGVDEWTALVKA 108
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 25 DGRIPIHELGTVMRFLGLT----PTEAELLDL-IREIDVNQRGTIDFPEFLTVMARKLNT 79
DG+I EL + G+ P E L + +D + GT+ F EF + A LN
Sbjct: 15 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWA-VLNG 73
Query: 80 PDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINY 139
+Q F FD + G + EL+ +TT+G RL+ VN + + + G+I +
Sbjct: 74 ------WRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTS--GKITF 125
Query: 140 EDFVTL 145
+D++
Sbjct: 126 DDYIAC 131
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 57 DVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRH-VMTTLGE 115
D G + F EF ++ ++I +FQ++D +QG+I E++ V+ TL E
Sbjct: 95 DTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAE 154
Query: 116 R-------LSEDEVNEMIQEADINGDGRINYEDFVTLM 146
+ ED +++ +EAD DG+I+ E++ +L+
Sbjct: 155 SGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV 192
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 1 MADQLT--EEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDV 58
MA +L+ I E F + +G + E+ TV+ +G+ + ++ +++ +D+
Sbjct: 27 MAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQALDI 84
Query: 59 NQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADEL 106
N RG I + EF+ R N + +K AF DK + GYI ++
Sbjct: 85 NDRGNITYTEFMAGCYRWKNIESTF--LKAAFNKIDKDEDGYISKSDI 130
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 73 MARKLNTPDS-TEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADI 131
MA +L+ ++ + I + F D + G + E+ V+ ++G + + ++N ++Q DI
Sbjct: 27 MAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDI 84
Query: 132 NGDGRINYEDFVT 144
N G I Y +F+
Sbjct: 85 NDRGNITYTEFMA 97
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
+I D + ++F EF V + + F+ +D+ G I +EL+ ++
Sbjct: 49 IISMFDRENKAGVNFSEFTGVWK-------YITDWQNVFRTYDRDNSGMIDKNELKQALS 101
Query: 112 TLGERLSEDEVNEMIQEADINGDGRINYEDFV 143
G RLS+ + +I++ D G G+I ++DF+
Sbjct: 102 GAGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 133
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 56 IDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGE 115
D ++ G IDF EF+ ++ + + +++ AFQ++D G I DE+ ++ + +
Sbjct: 72 FDADKNGYIDFKEFICALSVT-SRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYK 130
Query: 116 ------RLSEDE------VNEMIQEADINGDGRINYEDFV 143
+L EDE VN++ D N DG++ E+F
Sbjct: 131 MVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFC 170
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 39/87 (44%)
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
G ++ EF + + D + + F VFD K GYI E ++ D+
Sbjct: 41 GHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDK 100
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
+ Q D++ +G I+Y++ + ++ +
Sbjct: 101 LIWAFQLYDLDNNGLISYDEMLRIVDA 127
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTL--GER-LSEDEVNEMIQEADINGDGRIN 138
S ++K F+ D + GY+ +EL+ + G R L+E E ++ AD +GDG+I
Sbjct: 40 SANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIG 99
Query: 139 YEDFVTLMTS 148
E+F ++ S
Sbjct: 100 AEEFQEMVHS 109
>pdb|1WLZ|A Chain A, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|B Chain B, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|C Chain C, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|D Chain D, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
Length = 105
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 86 IKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTL 145
I Q F+ FD K I +E R + + L++++ + + E +N GR+ Y DF++
Sbjct: 26 ITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSR 85
Query: 146 MTS 148
+S
Sbjct: 86 FSS 88
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 66/151 (43%), Gaps = 20/151 (13%)
Query: 8 EQINDFKEAFSFFNRQGDGRIPIHELGT-----VMRFLGLTPTEAE-----LLDLIREID 57
+ +N K F+F + G+G+I + E+ + + LG TP + + + ++I
Sbjct: 20 KWVNRHKFMFNFLDINGNGKITLDEIVSKASDDICAKLGATPAQTQRHQEAVEAFFKKIG 79
Query: 58 VNQRGTIDFPEFLTVMAR------KLNTPDSTEEIKQ----AFQVFDKHKQGYICADELR 107
++ ++FP F+ KL + + I+ F +FDK G I DE +
Sbjct: 80 LDYGKEVEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWK 139
Query: 108 HVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
G S+++ + + D++ G+++
Sbjct: 140 TYGGISGICPSDEDAEKTFKHCDLDNSGKLD 170
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 59/151 (39%), Gaps = 20/151 (13%)
Query: 8 EQINDFKEAFSFFNRQGDGRIPIHELGT-----VMRFLGLTPTEAE-----LLDLIREID 57
+ I K F + + G+G+I + E+ + + + LG TP + + + R
Sbjct: 17 KWIKRHKFMFDYLDINGNGQITLDEIVSKASDDICKNLGATPAQTQRHQDCVEAFFRGCG 76
Query: 58 VNQRGTIDFPEFL---------TVMARKLNTPDSTEEIKQA-FQVFDKHKQGYICADELR 107
+ FPEFL + N P E A F +FDK G I DE +
Sbjct: 77 LEYGKETKFPEFLEGWKNLANADLAKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK 136
Query: 108 HVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
G SE++ + Q D++ G ++
Sbjct: 137 AYGRISGISPSEEDCEKTFQHCDLDNSGELD 167
Score = 32.3 bits (72), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 17 FSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPE 68
F F++ G G I + E R G++P+E + + D++ G +D E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDE 170
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 9 QINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPE 68
++ FK + F+ G+G I I L ++ LG+ T EL LIRE+ T + +
Sbjct: 46 KLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSD 105
Query: 69 FLTVMARK 76
FL +M K
Sbjct: 106 FLRMMLGK 113
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 59/107 (55%), Gaps = 23/107 (21%)
Query: 57 DVNQRGTIDFPEFLTVMA--RKLNTPDS-TEEIKQ-------------AFQVFDKHKQGY 100
D +QR +DFP F+ V+A R + D+ T++ K+ AFQ++D + G
Sbjct: 73 DGSQR--VDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGK 130
Query: 101 ICADELRHVMTTL-GERLSEDEV----NEMIQEADINGDGRINYEDF 142
I E+ V+ + G +++E+++ + +QEAD +GDG +++ +F
Sbjct: 131 ISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEF 177
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 11 NDFKEAFSFFNRQGDGRIPIHELGTVMRFL-GLTPTEAELLDL----IREIDVNQRGTID 65
N AF ++ DG+I HE+ V+R + G+ TE +L ++ ++E D + G +
Sbjct: 114 NKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVS 173
Query: 66 FPEF 69
F EF
Sbjct: 174 FVEF 177
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 4 QLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVM-RFLGLTPTEAELLDLIREIDVNQRG 62
+ +EE++ + + SF GRI + ++ +F T +A + R D N G
Sbjct: 29 KFSEEELCSWYQ--SFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDG 86
Query: 63 TIDFPEFLTVMARKLNTPDST-EEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
T+DF E+ V+A T T ++++ AF ++D G I +E+ ++ + + ++ ++
Sbjct: 87 TLDFKEY--VIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAIFKXITPED 144
Query: 122 V 122
V
Sbjct: 145 V 145
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 15/99 (15%)
Query: 54 REIDVNQRGT-IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTT 112
R I+ N++ ++ PE L + KL+ AF+++D K I DEL V+
Sbjct: 91 RPIEDNEKSKDVNGPEPLNSRSNKLHF---------AFRLYDLDKDDKISRDELLQVLRM 141
Query: 113 L-GERLSEDEVNEM----IQEADINGDGRINYEDFVTLM 146
+ G +S++++ + IQEAD +GD I++ +FV ++
Sbjct: 142 MVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 35/154 (22%)
Query: 3 DQLTEEQINDFKEAF-SFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQR 61
D++T+E++ K++F S ++ DGR+ I EL + P E L
Sbjct: 48 DKITDERVQQIKKSFXSAYDATFDGRLQIEELANXI-----LPQEENFL----------- 91
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL----GERL 117
++ R+ D++ E + ++ +D GYI A EL++ + L +++
Sbjct: 92 ----------LIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKI 141
Query: 118 SEDEVNEMIQEA----DINGDGRINYEDFVTLMT 147
++++E D N DGR++ D ++
Sbjct: 142 PPNKLDEYTDAXXKIFDKNKDGRLDLNDLARILA 175
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 15/99 (15%)
Query: 54 REIDVNQRGT-IDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTT 112
R I+ N++ ++ PE L + KL+ AF+++D K I DEL V+
Sbjct: 91 RPIEDNEKSKDVNGPEPLNSRSNKLHF---------AFRLYDLDKDEKISRDELLQVLRM 141
Query: 113 L-GERLSEDEVNEM----IQEADINGDGRINYEDFVTLM 146
+ G +S++++ + IQEAD +GD I++ +FV ++
Sbjct: 142 MVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
+I D + ++F EF V + + F+ +D+ G I +EL+ ++
Sbjct: 46 IISMFDRENKAGVNFSEFTGVWK-------YITDWQNVFRTYDRDNSGMIDKNELKQALS 98
Query: 112 TLGERLSEDEVNEMIQEADINGDGRINYEDFV 143
G RLS+ + +I++ D G G+I ++DF+
Sbjct: 99 --GYRLSDQFHDILIRKFDRQGRGQIAFDDFI 128
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 78 NTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
N P+ K+ + FD + +G I L+ +M LG + E+ +MI E I
Sbjct: 44 NLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTI 103
Query: 138 NYEDFVTLM 146
+Y DFV +M
Sbjct: 104 SYRDFVNMM 112
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 8 EQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFP 67
E++ FKE + F+ +G I + L +M LG+ T E+ +I E+ TI +
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 68 EFLTVMARK 76
+F+ +M K
Sbjct: 107 DFVNMMLGK 115
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 24 GDGRIPIHELGTVMRFLGLTPTEAELLDLI-REIDVNQRGTIDFPEFLTVMA--RKLNTP 80
GDG + E+ + E +LL LI + ID + G ID EF + +
Sbjct: 13 GDGAVSYEEVKAFVSKKRAIKNE-QLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLS 71
Query: 81 DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYE 140
D +K +++ D G + +E+ T+ ++ ++V E + +AD NGDG I E
Sbjct: 72 DDKIGLKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVAEQVMKADANGDGYITLE 127
Query: 141 DFV 143
+F+
Sbjct: 128 EFL 130
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
L +EIDVN G + + E +++K + + ++ F+ D G I +E
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 112 TL-GERLSEDEVN--EMIQEADINGDGRINYEDFVTLM 146
++ G+ LS+D++ + + D++GDG++ E+ +
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFF 101
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 24 GDGRIPIHELGTVMRFLGLTPTEAELLDLI-REIDVNQRGTIDFPEFLTVMA--RKLNTP 80
GDG + E+ + E +LL LI + ID + G ID EF + +
Sbjct: 13 GDGAVSYEEVKAFVSKKRAIKNE-QLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLS 71
Query: 81 DSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYE 140
D +K +++ D G + +E+ T+ ++ ++V E + +AD NGDG I E
Sbjct: 72 DDKIGLKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVAEQVMKADANGDGYITLE 127
Query: 141 DFV 143
+F+
Sbjct: 128 EFL 130
Score = 33.5 bits (75), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
L +EIDVN G + + E +++K + + ++ F+ D G I +E
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 112 TL-GERLSEDEVN--EMIQEADINGDGRINYEDFVTL 145
++ G+ LS+D++ + + D++GDG++ E+ +
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSF 100
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 78 NTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
N P+ K+ + FD + +G I L+ +M LG + E+ +MI E I
Sbjct: 44 NLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTI 103
Query: 138 NYEDFVTLM 146
+Y DFV +M
Sbjct: 104 SYRDFVNMM 112
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 8 EQINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFP 67
E++ FKE + F+ +G I + L +M LG+ T E+ +I E+ TI +
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 68 EFLTVMARK 76
+F+ +M K
Sbjct: 107 DFVNMMLGK 115
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 86 IKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTL 145
+K + DK+ G I ADE +T LG +S+ E E + D NG+G ++ ++ +T
Sbjct: 104 VKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELLTA 161
Query: 146 M 146
+
Sbjct: 162 V 162
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 13/93 (13%)
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQ--AFQVFDKHKQGYICADELRHVMTTL---GE 115
+ ++ F +FL +++ +T +T +IK AF++FD G + ++L ++ L GE
Sbjct: 106 KDSLSFEDFLDLLSVFSDT--ATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE 163
Query: 116 --RLSEDEVNEMI----QEADINGDGRINYEDF 142
RLS E+ ++I +E+DI+ DG IN +F
Sbjct: 164 DTRLSASEMKQLIDNILEESDIDRDGTINLSEF 196
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 13/93 (13%)
Query: 61 RGTIDFPEFLTVMARKLNTPDSTEEIKQ--AFQVFDKHKQGYICADELRHVMTTL---GE 115
+ ++ F +FL +++ +T +T +IK AF++FD G + ++L ++ L GE
Sbjct: 75 KDSLSFEDFLDLLSVFSDT--ATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE 132
Query: 116 --RLSEDEVNEMI----QEADINGDGRINYEDF 142
RLS E+ ++I +E+DI+ DG IN +F
Sbjct: 133 DTRLSASEMKQLIDNILEESDIDRDGTINLSEF 165
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 105 ELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
EL H+++ G R + D+ +IQ D N DGRI+++++ TL+
Sbjct: 44 ELNHMLSDTGNRKAADK---LIQNLDANHDGRISFDEYWTLI 82
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 56 IDVNQRGTIDFPEF---LTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTT 112
D N+ G I+F EF L+V +R T D E+++ AF+++D GYI +E+ ++
Sbjct: 72 FDENKDGRIEFSEFIQALSVTSR--GTLD--EKLRWAFKLYDLDNDGYITRNEMLDIVDA 127
Query: 113 LG------------ERLSEDEVNEMIQEADINGDGRINYEDF 142
+ E E V+ + D N DG++ ++F
Sbjct: 128 IYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEF 169
>pdb|3NXA|A Chain A, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|B Chain B, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|C Chain C, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|D Chain D, X-Ray Structure Of The Apo Form Of Human S100a16
Length = 100
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 105 ELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
EL H+++ G R + D+ +IQ D N DGRI+++++ TL+
Sbjct: 43 ELNHMLSDTGNRKAADK---LIQNLDANHDGRISFDEYWTLI 81
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
+ R D N TIDF E++ + L ++K F+++DK + G I EL ++
Sbjct: 64 MFRAFDTNGDNTIDFLEYVAALNLVLRGT-LEHKLKWTFKIYDKDRNGCIDRQELLDIVE 122
Query: 112 TL----------------GERLSEDEV-NEMIQEADINGDGRINYEDFV 143
++ G+ L+ +EV + + D NGDG+++ +FV
Sbjct: 123 SIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 12/72 (16%)
Query: 84 EEIKQAFQVFDKHKQGYICADEL------------RHVMTTLGERLSEDEVNEMIQEADI 131
E++K AF ++D +K GYI +E+ RH L E + V ++ D
Sbjct: 9 EKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDR 68
Query: 132 NGDGRINYEDFV 143
N DG + E+F+
Sbjct: 69 NQDGVVTIEEFL 80
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 14 KEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLI 53
K+ F+ F+++G G I LG +R +G PT + D+I
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDII 46
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTLG 114
S EE+ AF++FDK+ GYI +EL ++ G
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRATG 35
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 16 AFSFFNRQGDGRIPIHELGTVMRFLG 41
AF F++ DG I I ELG ++R G
Sbjct: 10 AFRIFDKNADGYIDIEELGEILRATG 35
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
+I +D + G + F F + A + K+ F D+ G + ELR +
Sbjct: 45 MIAMLDRDHTGKMGFNAFKELWA-------ALNAWKENFMTVDQDGSGTVEHHELRQAIG 97
Query: 112 TLGERLSEDEVNEMIQEADINGDGRINYEDFVTL 145
+G RLS + +++ N GRI ++D+V
Sbjct: 98 LMGYRLSPQTLTTIVKRYSKN--GRIFFDDYVAC 129
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEF 69
+N +KE F ++ G G + HEL + +G + L +++ N G I F ++
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKN--GRIFFDDY 126
Query: 70 LTVMAR 75
+ +
Sbjct: 127 VACCVK 132
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
+I +D + G + F F + A + K+ F D+ G + ELR +
Sbjct: 45 MIAMLDRDHTGKMGFNAFKELWA-------ALNAWKENFMTVDQDGSGTVEHHELRQAIG 97
Query: 112 TLGERLSEDEVNEMIQEADINGDGRINYEDFVTL 145
+G RLS + +++ N GRI ++D+V
Sbjct: 98 LMGYRLSPQTLTTIVKRYSKN--GRIFFDDYVAC 129
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEF 69
+N +KE F ++ G G + HEL + +G + L +++ N G I F ++
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKN--GRIFFDDY 126
Query: 70 LTVMAR 75
+ +
Sbjct: 127 VACCVK 132
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 30/156 (19%)
Query: 8 EQINDFKEAFSFFNRQGDGRIPIHEL-----GTVMRFLGLTPTEAELLDLIREIDVNQRG 62
+ I K F+F + +GRI + E+ V+ LG TP +A+ E G
Sbjct: 13 KWIGRHKHMFNFLDVNHNGRISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAG 72
Query: 63 T-----IDFPEFLTVMARKLNTPDSTEEIKQA---------------FQVFDKHKQGYIC 102
++PE++ R ++EE+K+ F + DK + G I
Sbjct: 73 MKYGVETEWPEYIEGWKRL-----ASEELKRYSKNQITLIRLWGDALFDIIDKDQNGAIS 127
Query: 103 ADELRHVMTTLGERLSEDEVNEMIQEADINGDGRIN 138
DE + + G S ++ E + DI+ G+++
Sbjct: 128 LDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLD 163
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 20/149 (13%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGT-----VMRFLGLTPTEAE-----LLDLIREIDVN 59
I K F F + G+G+I + E+ + + L TP + + + R +
Sbjct: 19 IKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGME 78
Query: 60 QRGTIDFPEFL-------TVMARKL--NTPDSTEEIKQA-FQVFDKHKQGYICADELRHV 109
I FP+FL T +K N P E A F +FDK G I DE +
Sbjct: 79 YGKEIAFPQFLDGFKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAY 138
Query: 110 MTTLGERLSEDEVNEMIQEADINGDGRIN 138
G S+++ + D++ G ++
Sbjct: 139 GKISGISPSQEDCEATFRHCDLDNSGDLD 167
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 20/149 (13%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGT-----VMRFLGLTPTEAE-----LLDLIREIDVN 59
I K F F + G+G+I + E+ + + L TP + + + R +
Sbjct: 19 IKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGME 78
Query: 60 QRGTIDFPEFL-------TVMARKL--NTPDSTEEIKQA-FQVFDKHKQGYICADELRHV 109
I FP+FL T +K N P E A F +FDK G I DE +
Sbjct: 79 YGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAY 138
Query: 110 MTTLGERLSEDEVNEMIQEADINGDGRIN 138
G S+++ + D++ G ++
Sbjct: 139 GKISGISPSQEDCEATFRHCDLDNSGDLD 167
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 20/149 (13%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGT-----VMRFLGLTPTEAE-----LLDLIREIDVN 59
I K F F + G+G+I + E+ + + L TP + + + R +
Sbjct: 19 IKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGME 78
Query: 60 QRGTIDFPEFL-------TVMARKL--NTPDSTEEIKQA-FQVFDKHKQGYICADELRHV 109
I FP+FL T +K N P E A F +FDK G I DE +
Sbjct: 79 YGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAY 138
Query: 110 MTTLGERLSEDEVNEMIQEADINGDGRIN 138
G S+++ + D++ G ++
Sbjct: 139 GKISGISPSQEDCEATFRHCDLDNSGDLD 167
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 79 TPDSTE-EIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRI 137
P S+ + +Q F DK G++ + R ++ + L + ++ + +DI+ DG++
Sbjct: 8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTIL--MQSSLPQAQLASIWNLSDIDQDGKL 65
Query: 138 NYEDFVTLM 146
E+F+ M
Sbjct: 66 TAEEFILAM 74
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 23/29 (79%)
Query: 120 DEVNEMIQEADINGDGRINYEDFVTLMTS 148
D V+++++E D NGDG +++++FV L+ +
Sbjct: 52 DAVDKIMKELDENGDGEVDFQEFVVLVAA 80
Score = 25.8 bits (55), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMA 74
+++E+D N G +DF EF+ ++A
Sbjct: 57 IMKELDENGDGEVDFQEFVVLVA 79
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 94 DKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLMTS 148
DKH EL T+G +L + E+ ++++ D N D +N++++VT + +
Sbjct: 25 DKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 79
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 82 STEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE--DEVNEMIQEADINGDGRINY 139
S EE+K F+ +DK G + +EL+ ++ T L + ++E+ +E D NGDG +++
Sbjct: 3 SPEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMSTLDELFEELDKNGDGEVSF 62
Query: 140 EDFVTLM 146
E+F L+
Sbjct: 63 EEFQVLV 69
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 20/149 (13%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGT-----VMRFLGLTPTEAE-----LLDLIREIDVN 59
I K F F + G+G+I + E+ + + L TP + + + R +
Sbjct: 19 IKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGME 78
Query: 60 QRGTIDFPEFL-------TVMARKL--NTPDSTEEIKQA-FQVFDKHKQGYICADELRHV 109
I FP+FL T +K N P E A F +FDK G I DE +
Sbjct: 79 YGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAY 138
Query: 110 MTTLGERLSEDEVNEMIQEADINGDGRIN 138
G S+++ + D++ G ++
Sbjct: 139 GKISGISPSQEDCEATFRHCDLDDSGDLD 167
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 90 FQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVT 144
+ D K GY+ E + + +G L++D+ D N +G+I+ ++F+
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLV 162
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 90 FQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVT 144
+ D K GY+ E + + +G L++D+ D N +G+I+ ++F+
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLV 162
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 20/149 (13%)
Query: 10 INDFKEAFSFFNRQGDGRIPIHELGT-----VMRFLGLTPTEAE-----LLDLIREIDVN 59
I K F F + G+G+I + E+ + + L TP + + + R +
Sbjct: 19 IKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGME 78
Query: 60 QRGTIDFPEFL-------TVMARKL--NTPDSTEEIKQA-FQVFDKHKQGYICADELRHV 109
I FP+FL T +K N P E A F +FDK G I DE +
Sbjct: 79 YGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAY 138
Query: 110 MTTLGERLSEDEVNEMIQEADINGDGRIN 138
G S+++ + D++ G ++
Sbjct: 139 GKISGISPSQEDCEATFRHCDLDNAGDLD 167
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 45 TEAELLDLIREIDVNQRGTIDFPEFLTVM 73
TE ++ DL+++ D N G IDF EFL +M
Sbjct: 3 TEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 26/30 (86%)
Query: 117 LSEDEVNEMIQEADINGDGRINYEDFVTLM 146
++E+++ ++++++D N DGRI++++F+ +M
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 52 LIREIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMT 111
++ +D + G + F EF + ++ + + ++ FD + G IC+ EL
Sbjct: 63 MVAVMDSDTTGKLGFEEFKYLW-------NNIKRWQAIYKQFDTDRSGTICSSELPGAFE 115
Query: 112 TLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
G L+E N +I+ + G +++++F++ +
Sbjct: 116 AAGFHLNEHLYNMIIRRYS-DESGNMDFDNFISCL 149
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 94 DKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLMTS 148
DKH EL T+G +L + E+ + ++ D N D +N++++VT + +
Sbjct: 25 DKHTLSKKELKELIQKELTIGSKLQDAEIARLXEDLDRNKDQEVNFQEYVTFLGA 79
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 74 ARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEA-DIN 132
AR L P+ +E + F +FD++ + + ++T LG+ ++ E +++EA
Sbjct: 5 ARALG-PEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPK 63
Query: 133 GDGR-INYEDFVTLMTS 148
GD + I E+++TL +
Sbjct: 64 GDKKNIGPEEWLTLCSK 80
>pdb|1F59|A Chain A, Importin-Beta-Fxfg Nucleoporin Complex
pdb|1F59|B Chain B, Importin-Beta-Fxfg Nucleoporin Complex
pdb|1O6P|A Chain A, Importin Beta Bound To A Glfg Nucleoporin Peptide
pdb|1O6P|B Chain B, Importin Beta Bound To A Glfg Nucleoporin Peptide
pdb|1O6O|A Chain A, Importin Beta Aa1-442 Bound To Five Fxfg Repeats From
Yeast Nsp1p. Second Crystal Form
pdb|1O6O|B Chain B, Importin Beta Aa1-442 Bound To Five Fxfg Repeats From
Yeast Nsp1p. Second Crystal Form
pdb|1O6O|C Chain C, Importin Beta Aa1-442 Bound To Five Fxfg Repeats From
Yeast Nsp1p. Second Crystal Form
Length = 442
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 55 EIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICAD 104
EI VNQ +PE + + + P+STE +K++ GYIC D
Sbjct: 120 EIPVNQ-----WPELIPQLVANVTNPNSTEHMKES----TLEAIGYICQD 160
>pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1A03|B Chain B, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1CNP|A Chain A, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1CNP|B Chain B, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1JWD|A Chain A, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|1JWD|B Chain B, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|2CNP|A Chain A, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2CNP|B Chain B, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2JTT|A Chain A, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
pdb|2JTT|B Chain B, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
Length = 90
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 94 DKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLMTS 148
DKH EL T+G +L + E+ +++ + D N D +N+++++T + +
Sbjct: 25 DKHTLSKKELKELIQKELTIGSKLQDAEIVKLMDDLDRNKDQEVNFQEYITFLGA 79
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
++++ QE D NGDG +++E+F L+
Sbjct: 49 LDDLFQELDKNGDGEVSFEEFQVLV 73
>pdb|1M5N|S Chain S, Crystal Structure Of Heat Repeats (1-11) Of Importin B
Bound To The Non-Classical Nls(67-94) Of Pthrp
Length = 485
Score = 28.9 bits (63), Expect = 1.0, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 55 EIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICAD 104
EI VNQ +PE + + + P+STE +K++ GYIC D
Sbjct: 120 EIPVNQ-----WPELIPQLVANVTNPNSTEHMKES----TLEAIGYICQD 160
>pdb|1IBR|D Chain D, Complex Of Ran With Importin Beta
pdb|1IBR|B Chain B, Complex Of Ran With Importin Beta
Length = 462
Score = 28.9 bits (63), Expect = 1.2, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 55 EIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICAD 104
EI VNQ +PE + + + P+STE +K++ GYIC D
Sbjct: 120 EIPVNQ-----WPELIPQLVANVTNPNSTEHMKES----TLEAIGYICQD 160
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 36/135 (26%)
Query: 20 FNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPEFLTVMARKLNT 79
+ ++ DG+I I EL V+ PTE L L R ++L
Sbjct: 67 YGQRDDGKIGIVELAHVL------PTEENFLLLFR-------------------CQQLK- 100
Query: 80 PDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSE--------DEVNEMIQEADI 131
S EE + ++ +D G+I +EL++ + L E+ ++ + + M++ D
Sbjct: 101 --SCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDS 158
Query: 132 NGDGRINYEDFVTLM 146
N DG++ + L+
Sbjct: 159 NNDGKLELTEMARLL 173
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 24/98 (24%)
Query: 47 AELLDLIREI-DVNQRGTIDFPEFLTVMARKLNTPDS-----------TEEIKQAFQVFD 94
AE DL+ ++ D N G ++ LT MAR L ++ +E +AF+++D
Sbjct: 146 AEYTDLMLKLFDSNNDGKLE----LTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYD 201
Query: 95 KHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADIN 132
+ GYI +EL ++ L E+ QE DIN
Sbjct: 202 QDGNGYIDENELDALLKDLCEKNK--------QELDIN 231
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
++E+ +E D NGDG +++E+F L+
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLV 70
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
++E+ +E D NGDG +++E+F L+
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLV 71
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
++E+ +E D NGDG +++E+F L+
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLV 70
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
++E+ +E D NGDG +++E+F L+
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLV 70
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
++E+ +E D NGDG +++E+F L+
Sbjct: 50 LDELFEELDKNGDGEVSFEEFQVLV 74
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
++E+ +E D NGDG +++E+F L+
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLV 71
>pdb|1QGK|A Chain A, Structure Of Importin Beta Bound To The Ibb Domain Of
Importin Alpha
pdb|1QGR|A Chain A, Structure Of Importin Beta Bound To The Ibb Domain Of
Importin Alpha (Ii Crystal Form, Grown At Low Ph)
Length = 876
Score = 28.5 bits (62), Expect = 1.5, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 55 EIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICAD 104
EI VNQ +PE + + + P+STE +K++ GYIC D
Sbjct: 120 EIPVNQ-----WPELIPQLVANVTNPNSTEHMKES----TLEAIGYICQD 160
>pdb|2P8Q|A Chain A, Crystal Structure Of Human Importin Beta Bound To The
Snurportin1 Ibb- Domain
pdb|2Q5D|A Chain A, Crystal Structure Of Human Importin Beta Bound To The
Snurportin1 Ibb-Domain Second Crystal Form
pdb|2Q5D|B Chain B, Crystal Structure Of Human Importin Beta Bound To The
Snurportin1 Ibb-Domain Second Crystal Form
pdb|3LWW|A Chain A, Structure Of An Open And Closed Conformation Of Human
Importin Beta Bound To The Snurportin1 Ibb-Domain
Trapped In The Same Crystallographic Asymmetric Unit
pdb|3LWW|C Chain C, Structure Of An Open And Closed Conformation Of Human
Importin Beta Bound To The Snurportin1 Ibb-Domain
Trapped In The Same Crystallographic Asymmetric Unit
Length = 876
Score = 28.5 bits (62), Expect = 1.5, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 55 EIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICAD 104
EI VNQ +PE + + + P+STE +K++ GYIC D
Sbjct: 120 EIPVNQ-----WPELIPQLVANVTNPNSTEHMKES----TLEAIGYICQD 160
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
++E+ +E D NGDG +++E+F L+
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLV 70
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
++E+ +E D NGDG +++E+F L+
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLV 71
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 37/87 (42%)
Query: 62 GTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDE 121
G ++ F + ++ DST F FD G + ++ ++ L +++
Sbjct: 80 GVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEK 139
Query: 122 VNEMIQEADINGDGRINYEDFVTLMTS 148
+N DIN DG I E+ + +M +
Sbjct: 140 LNWAFNLYDINKDGYITKEEMLDIMKA 166
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
++E+ +E D NGDG +++E+F L+
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLV 71
>pdb|3NSX|A Chain A, The Crystal Structure Of The The Crystal Structure Of The
D420a Mutant Of The Alpha-Glucosidase (Family 31) From
Ruminococcus Obeum Atcc 29174
pdb|3NSX|B Chain B, The Crystal Structure Of The The Crystal Structure Of The
D420a Mutant Of The Alpha-Glucosidase (Family 31) From
Ruminococcus Obeum Atcc 29174
Length = 666
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 53 IREIDVNQRGTIDFPEFLTVMA----RKLNTPDSTEEIKQAFQVFDKH-KQGYICADE 105
++ VN++ DFPEF+ M R + D+ ++++ ++V+++ K Y C E
Sbjct: 207 FKDFTVNEKNFPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYFCKRE 264
>pdb|3M6D|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3M6D|B Chain B, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3MKK|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
In Complex With Isomaltose
pdb|3MKK|B Chain B, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
In Complex With Isomaltose
pdb|3POC|A Chain A, The Crystal Structure Of The D307a Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3POC|B Chain B, The Crystal Structure Of The D307a Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
Length = 666
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 53 IREIDVNQRGTIDFPEFLTVMA----RKLNTPDSTEEIKQAFQVFDKH-KQGYICADE 105
++ VN++ DFPEF+ M R + D+ ++++ ++V+++ K Y C E
Sbjct: 207 FKDFTVNEKNFPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYFCKRE 264
>pdb|3M46|A Chain A, The Crystal Structure Of The D73a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3M46|B Chain B, The Crystal Structure Of The D73a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
Length = 666
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 53 IREIDVNQRGTIDFPEFLTVMA----RKLNTPDSTEEIKQAFQVFDKH-KQGYICADE 105
++ VN++ DFPEF+ M R + D+ ++++ ++V+++ K Y C E
Sbjct: 207 FKDFTVNEKNFPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYFCKRE 264
>pdb|3PHA|A Chain A, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|B Chain B, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|C Chain C, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|D Chain D, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
Length = 667
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 53 IREIDVNQRGTIDFPEFLTVMA----RKLNTPDSTEEIKQAFQVFDKH-KQGYICADE 105
++ VN++ DFPEF+ M R + D+ ++++ ++V+++ K Y C E
Sbjct: 207 FKDFTVNEKNFPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYFCKRE 264
>pdb|3NUK|A Chain A, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174
pdb|3NUK|B Chain B, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174
Length = 666
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 53 IREIDVNQRGTIDFPEFLTVMA----RKLNTPDSTEEIKQAFQVFDKH-KQGYICADE 105
++ VN++ DFPEF+ M R + D+ ++++ ++V+++ K Y C E
Sbjct: 207 FKDFTVNEKNFPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYFCKRE 264
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 86 IKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFV 143
+K +++ D G + +E+ T+ ++ ++V E + +AD NGDG I E+F+
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVAEQVMKADANGDGYITLEEFL 60
>pdb|1J55|A Chain A, The Crystal Structure Of Ca+-Bound Human S100p Determined
At 2.0a Resolution By X-Ray
Length = 95
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 7/30 (23%), Positives = 22/30 (73%)
Query: 119 EDEVNEMIQEADINGDGRINYEDFVTLMTS 148
+D V++++++ D NGD ++++ +F+ + +
Sbjct: 51 KDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80
>pdb|1OZO|A Chain A, Three-Dimensional Solution Structure Of Apo-S100p Protein
Determined By Nmr Spectroscopy
pdb|1OZO|B Chain B, Three-Dimensional Solution Structure Of Apo-S100p Protein
Determined By Nmr Spectroscopy
Length = 95
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 7/30 (23%), Positives = 22/30 (73%)
Query: 119 EDEVNEMIQEADINGDGRINYEDFVTLMTS 148
+D V++++++ D NGD ++++ +F+ + +
Sbjct: 51 KDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt
Length = 611
Score = 27.3 bits (59), Expect = 2.9, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 118 SEDEVNEMIQEADINGDGRINYEDFVTL 145
S D N Q AD+N DG+IN D L
Sbjct: 571 SIDRFNTSEQAADLNRDGKINSTDLTIL 598
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 8/117 (6%)
Query: 40 LGLTPTEAELLDLIREIDVNQRG--------TIDFPEFLTVMARKLNTPDSTEEIKQAFQ 91
+GL EA+ RE+ V RG ++ F + A+ D++ F
Sbjct: 1 MGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFN 60
Query: 92 VFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLMTS 148
FD + G + ++ ++ L +++ DIN DG IN E+ + ++ +
Sbjct: 61 AFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
>pdb|1T8T|A Chain A, Crystal Structure Of Human 3-O-Sulfotransferase-3 With
Bound Pap
pdb|1T8T|B Chain B, Crystal Structure Of Human 3-O-Sulfotransferase-3 With
Bound Pap
Length = 271
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 3/129 (2%)
Query: 9 QINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPE 68
QI K F R+ RI T + + P + D + + ++R I E
Sbjct: 75 QITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTL--SKRPDIPTFE 132
Query: 69 FLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQE 128
LT R D++ Q ++ KH + ++ +R ++ GERL D E+ +
Sbjct: 133 SLTFKNRTAGLIDTSWSAIQ-IGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRV 191
Query: 129 ADINGDGRI 137
D G RI
Sbjct: 192 QDFLGLKRI 200
>pdb|1T8U|A Chain A, Crystal Structure Of Human 3-O-Sulfotransferase-3 With
Bound Pap And Tetrasaccharide Substrate
pdb|1T8U|B Chain B, Crystal Structure Of Human 3-O-Sulfotransferase-3 With
Bound Pap And Tetrasaccharide Substrate
Length = 272
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 3/129 (2%)
Query: 9 QINDFKEAFSFFNRQGDGRIPIHELGTVMRFLGLTPTEAELLDLIREIDVNQRGTIDFPE 68
QI K F R+ RI T + + P + D + + ++R I E
Sbjct: 76 QITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTL--SKRPDIPTFE 133
Query: 69 FLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQE 128
LT R D++ Q ++ KH + ++ +R ++ GERL D E+ +
Sbjct: 134 SLTFKNRTAGLIDTSWSAIQ-IGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRV 192
Query: 129 ADINGDGRI 137
D G RI
Sbjct: 193 QDFLGLKRI 201
>pdb|2Y3N|B Chain B, Type Ii Cohesin-Dockerin Domain From Bacteroides
Cellolosolvens
pdb|2Y3N|D Chain D, Type Ii Cohesin-Dockerin Domain From Bacteroides
Cellolosolvens
Length = 71
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 94 DKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTL 145
D + G I ++ + + G+ + VNE +AD+N DG IN +D + L
Sbjct: 8 DLNGDGVINMADVMILAQSFGKAIGNPGVNE---KADLNNDGVINSDDAIIL 56
>pdb|4EPL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Gh3.11 (Jar1) In
Complex With Ja-Ile
Length = 581
Score = 26.9 bits (58), Expect = 3.7, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 3 DQLTEEQINDFKEAFSFFNRQGDGRIPIHELGTVMRFL 40
D+L E + F+ AF+F NR PI + G ++F+
Sbjct: 121 DELMENTLQLFRTAFAFRNRD----FPIDDNGKALQFI 154
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 98 QGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
G++ D+++ V+ L +L D + + + +DI+ DG ++ ++F M
Sbjct: 23 NGFLSGDKVKPVL--LNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 69
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 41 GLTPTEAELLDLIREIDVNQRG--------TIDFPEFLTVMARKLNTPDSTEEIKQAFQV 92
GL EA+ RE+ V RG ++ F + A+ D++ F
Sbjct: 5 GLEQLEAQTNFTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNA 64
Query: 93 FDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLMTS 148
FD + G + ++ ++ L +++ DIN DG IN E+ + ++ +
Sbjct: 65 FDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 98 QGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
G++ D+++ V+ L +L D + + + +DI+ DG ++ ++F M
Sbjct: 28 NGFLSGDKVKPVL--LNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 74
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 98 QGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
G++ D+++ V+ L +L D + + + +DI+ DG ++ ++F M
Sbjct: 28 NGFLSGDKVKPVL--LNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 74
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 98 QGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLM 146
G++ D+++ V+ L +L D + + + +DI+ DG ++ ++F M
Sbjct: 23 NGFLSGDKVKPVL--LNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 69
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 41 GLTPTEAELLDLIREIDVNQRG--------TIDFPEFLTVMARKLNTPDSTEEIKQAFQV 92
GL EA+ RE+ V RG ++ F + A+ D++ F
Sbjct: 2 GLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNA 61
Query: 93 FDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLMTS 148
FD + G + ++ ++ L +++ DIN DG IN E+ + ++ +
Sbjct: 62 FDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 7/25 (28%), Positives = 21/25 (84%)
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
++ M+++ D+N DG++++++F+ L+
Sbjct: 56 LDRMMKKLDLNSDGQLDFQEFLNLI 80
>pdb|1UKL|A Chain A, Crystal Structure Of Importin-Beta And Srebp-2 Complex
pdb|1UKL|B Chain B, Crystal Structure Of Importin-Beta And Srebp-2 Complex
Length = 876
Score = 26.2 bits (56), Expect = 6.6, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 55 EIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICAD 104
EI V+Q +PE + + + P+STE +K++ GYIC D
Sbjct: 120 EIPVSQ-----WPELIPQLVANVTNPNSTEHMKES----TLEAIGYICQD 160
>pdb|1XK4|A Chain A, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|B Chain B, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|E Chain E, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|F Chain F, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|I Chain I, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|J Chain J, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|4GGF|A Chain A, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|K Chain K, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|S Chain S, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|U Chain U, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 93
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 16/20 (80%)
Query: 127 QEADINGDGRINYEDFVTLM 146
+E DIN DG +N+++F+ L+
Sbjct: 56 KELDINTDGAVNFQEFLILV 75
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 41 GLTPTEAELLDLIREIDVNQRG--------TIDFPEFLTVMARKLNTPDSTEEIKQAFQV 92
GL EA+ RE+ V RG ++ F + A+ D++ F
Sbjct: 38 GLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNA 97
Query: 93 FDKHKQGYICADELRHVMTTLGERLSEDEVNEMIQEADINGDGRINYEDFVTLMTS 148
FD + G + ++ ++ L +++ DIN DG IN E+ + ++ +
Sbjct: 98 FDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 153
>pdb|1MR8|A Chain A, Migration Inhibitory Factor-Related Protein 8 From Human
pdb|1MR8|B Chain B, Migration Inhibitory Factor-Related Protein 8 From Human
Length = 93
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 16/20 (80%)
Query: 127 QEADINGDGRINYEDFVTLM 146
+E DIN DG +N+++F+ L+
Sbjct: 56 KELDINTDGAVNFQEFLILV 75
>pdb|2VR2|A Chain A, Human Dihydropyrimidinase
Length = 541
Score = 26.2 bits (56), Expect = 6.8, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 31/79 (39%)
Query: 54 REIDVNQRGTIDFPEFLTVMARKLNTPDSTEEIKQAFQVFDKHKQGYICADELRHVMTTL 113
R ID +GT T M P + +AF+ + +C D HV T
Sbjct: 100 RSIDDFHQGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADPKVCCDYSLHVAVTW 159
Query: 114 GERLSEDEVNEMIQEADIN 132
++E+ ++Q+ +N
Sbjct: 160 WSDQVKEEMKILVQDKGVN 178
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 122 VNEMIQEADINGDGRINYEDFVTLM 146
++E+ +E D GDG +++E+F L+
Sbjct: 46 LDELFEELDKAGDGEVSFEEFQVLV 70
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 125 MIQEADINGDGRINYEDFVTLMT 147
+ +E D+NGDG ++YE+ ++
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVS 27
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,255,602
Number of Sequences: 62578
Number of extensions: 163778
Number of successful extensions: 1499
Number of sequences better than 100.0: 361
Number of HSP's better than 100.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 546
Number of HSP's gapped (non-prelim): 624
length of query: 148
length of database: 14,973,337
effective HSP length: 90
effective length of query: 58
effective length of database: 9,341,317
effective search space: 541796386
effective search space used: 541796386
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)