BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12853
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4IIY1|R144A_XENTR Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis
GN=rnf144a PE=2 SV=1
Length = 292
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 31/33 (93%)
Query: 8 DDFLLRHYDKGPCKNKLGHSRASVIWHRTQVSG 40
DDFLL HYDKGPC+NKLGHSRASVIWHRTQV G
Sbjct: 220 DDFLLIHYDKGPCRNKLGHSRASVIWHRTQVVG 252
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 35/51 (68%)
Query: 83 SRDYGGATFDSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASLD 133
S + + D IK CP C V IE+DEGCAQM+CK CKH FCWYCL SLD
Sbjct: 169 SSSFFKSLEDDVPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLD 219
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 31/42 (73%)
Query: 44 DSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRD 85
D IK CP C V IE+DEGCAQM+CK CKH FCWYCL S D
Sbjct: 178 DDVPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLD 219
>sp|P50876|R144A_HUMAN Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens
GN=RNF144A PE=1 SV=2
Length = 292
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 31/33 (93%)
Query: 8 DDFLLRHYDKGPCKNKLGHSRASVIWHRTQVSG 40
DDFLL HYDKGPC+NKLGHSRASVIWHRTQV G
Sbjct: 220 DDFLLIHYDKGPCRNKLGHSRASVIWHRTQVVG 252
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 44/85 (51%), Gaps = 20/85 (23%)
Query: 69 CKRCKHVFCWYCLASRDYGGA-------TF-------------DSELIKCCPMCSVPIEK 108
CK C+ FC C AS G TF D IK CP C V IE+
Sbjct: 135 CKACRMEFCSTCKASWHPGQGCPETMPITFLPGETSAAFKMEEDDAPIKRCPKCKVYIER 194
Query: 109 DEGCAQMLCKRCKHVFCWYCLASLD 133
DEGCAQM+CK CKH FCWYCL SLD
Sbjct: 195 DEGCAQMMCKNCKHAFCWYCLESLD 219
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 31/42 (73%)
Query: 44 DSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRD 85
D IK CP C V IE+DEGCAQM+CK CKH FCWYCL S D
Sbjct: 178 DDAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLD 219
>sp|Q925F3|R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus
GN=Rnf144a PE=1 SV=1
Length = 292
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 31/33 (93%)
Query: 8 DDFLLRHYDKGPCKNKLGHSRASVIWHRTQVSG 40
DDFLL HYDKGPC+NKLGHSRASVIWHRTQV G
Sbjct: 220 DDFLLIHYDKGPCRNKLGHSRASVIWHRTQVVG 252
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 31/38 (81%)
Query: 96 IKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASLD 133
IK CP C V IE+DEGCAQM+CK CKH FCWYCL SLD
Sbjct: 182 IKRCPKCRVYIERDEGCAQMMCKNCKHAFCWYCLESLD 219
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 30/38 (78%)
Query: 48 IKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRD 85
IK CP C V IE+DEGCAQM+CK CKH FCWYCL S D
Sbjct: 182 IKRCPKCRVYIERDEGCAQMMCKNCKHAFCWYCLESLD 219
>sp|Q5RFV4|R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio
GN=rnf144aa PE=3 SV=1
Length = 293
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 31/33 (93%)
Query: 8 DDFLLRHYDKGPCKNKLGHSRASVIWHRTQVSG 40
DDFLL HYDKGPC+NKLGHSRASVIWHRTQV G
Sbjct: 221 DDFLLIHYDKGPCRNKLGHSRASVIWHRTQVVG 253
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 35/51 (68%)
Query: 83 SRDYGGATFDSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASLD 133
S + A D IK CP C V IE+DEGCAQM+CK CKH FCWYCL SLD
Sbjct: 170 SSSFFKADDDDAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLD 220
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 31/42 (73%)
Query: 44 DSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRD 85
D IK CP C V IE+DEGCAQM+CK CKH FCWYCL S D
Sbjct: 179 DDAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLD 220
>sp|Q6DH94|R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio
GN=rnf144ab PE=2 SV=1
Length = 293
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 31/33 (93%)
Query: 8 DDFLLRHYDKGPCKNKLGHSRASVIWHRTQVSG 40
DDFLL HYDKGPC+NKLGHSRASVIWHRTQV G
Sbjct: 221 DDFLLIHYDKGPCRNKLGHSRASVIWHRTQVVG 253
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 32/42 (76%)
Query: 92 DSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASLD 133
D IK CP C V IE+DEGCAQM+CK CKH FCWYCL SLD
Sbjct: 179 DEAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLD 220
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 31/42 (73%)
Query: 44 DSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRD 85
D IK CP C V IE+DEGCAQM+CK CKH FCWYCL S D
Sbjct: 179 DEAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLD 220
>sp|A5PK27|R144B_BOVIN E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2
SV=1
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Query: 88 GATFDSEL---IKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASLD 133
G F +E IK CP+C V IE++EGCAQM+CK CKH FCWYCL +LD
Sbjct: 180 GTLFGTETDAPIKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQNLD 228
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 8 DDFLLRHYDKGPCKNKLGHSRASVIWHRTQVSGATFDSELI 48
+D LRHYD+GPC+NKLGHSRASV+W+RTQV G +I
Sbjct: 229 NDIFLRHYDRGPCRNKLGHSRASVMWNRTQVVGILVGLGII 269
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
Query: 40 GATFDSEL---IKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRD 85
G F +E IK CP+C V IE++EGCAQM+CK CKH FCWYCL + D
Sbjct: 180 GTLFGTETDAPIKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQNLD 228
>sp|Q7Z419|R144B_HUMAN E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1
SV=1
Length = 303
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 8 DDFLLRHYDKGPCKNKLGHSRASVIWHRTQVSGATFDSELI 48
+D LRHYDKGPC+NKLGHSRASV+W+RTQV G +I
Sbjct: 228 NDIFLRHYDKGPCRNKLGHSRASVMWNRTQVVGILVGLGII 268
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 32/38 (84%)
Query: 96 IKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASLD 133
IK CP+C V IE++EGCAQM+CK CKH FCWYCL +LD
Sbjct: 190 IKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQNLD 227
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%)
Query: 48 IKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRD 85
IK CP+C V IE++EGCAQM+CK CKH FCWYCL + D
Sbjct: 190 IKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYCLQNLD 227
>sp|Q8BKD6|R144B_MOUSE E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2
SV=2
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
Query: 88 GATFDSEL---IKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASLD 133
GA F ++ IK CP+C + IE++EGCAQM+CK CKH FCWYCL +LD
Sbjct: 177 GALFGTDADAPIKQCPVCRIYIERNEGCAQMMCKNCKHTFCWYCLQNLD 225
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 8 DDFLLRHYDKGPCKNKLGHSRASVIWHRTQVSG 40
+D LRHYDKGPC+NKLGHSRASV+W+RTQV G
Sbjct: 226 NDIFLRHYDKGPCRNKLGHSRASVMWNRTQVVG 258
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Query: 40 GATFDSEL---IKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRD 85
GA F ++ IK CP+C + IE++EGCAQM+CK CKH FCWYCL + D
Sbjct: 177 GALFGTDADAPIKQCPVCRIYIERNEGCAQMMCKNCKHTFCWYCLQNLD 225
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 55/140 (39%), Gaps = 40/140 (28%)
Query: 21 KNKLGHSRASVIWHRTQVSGATFDSELIKCCPM--CSVPIEKDEGCAQML-CKRCKHVFC 77
KN L + + S+I A+ +E IK CP C P+ +L C +C + FC
Sbjct: 682 KNWLKYQKFSMI--------ASLKTEPIKWCPTPDCDTPVRGGSERNPILNCPKCSNDFC 733
Query: 78 WYCLASRDYGGATFDSE----------------------------LIKCCPMCSVPIEKD 109
W C + GA +E +K CP C IEK
Sbjct: 734 WIC-GEYSHEGAKCGTEAMELQGRKNKSIESAATAYIDFLESNKHFVKPCPTCKSHIEKH 792
Query: 110 EGCAQMLCKRCKHVFCWYCL 129
+GC M C C+H FCW C+
Sbjct: 793 DGCNHMTCINCQHQFCWLCM 812
>sp|Q80TT8|CUL9_MOUSE Cullin-9 OS=Mus musculus GN=Cul9 PE=2 SV=2
Length = 1865
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 23/35 (65%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLAS 83
K CP C PIEK+EGC M C RC H FCW CL S
Sbjct: 1573 KRCPSCQAPIEKNEGCLHMTCARCNHGFCWRCLKS 1607
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 23/35 (65%)
Query: 97 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLAS 131
K CP C PIEK+EGC M C RC H FCW CL S
Sbjct: 1573 KRCPSCQAPIEKNEGCLHMTCARCNHGFCWRCLKS 1607
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 23/35 (65%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLAS 83
K CP C PIEK+EGC M C +C H FCW CL S
Sbjct: 2234 KRCPSCQAPIEKNEGCLHMTCAKCNHGFCWRCLKS 2268
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 23/35 (65%)
Query: 97 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLAS 131
K CP C PIEK+EGC M C +C H FCW CL S
Sbjct: 2234 KRCPSCQAPIEKNEGCLHMTCAKCNHGFCWRCLKS 2268
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 21/104 (20%)
Query: 48 IKCCPMCSVPIE---KDEGCAQMLCKRCKHVFCWYCLA------------------SRDY 86
++ CP P+ ++ ++ C RC VFC+ C + D
Sbjct: 225 LQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDS 284
Query: 87 GGATFDSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLA 130
A + S K CP C++ IEK+ GC M C +CKH FCW CL
Sbjct: 285 ETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLG 328
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 41 ATFDSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRDYGGATF 91
A + S K CP C++ IEK+ GC M C +CKH FCW CL G+ +
Sbjct: 287 ANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEY 337
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 21/104 (20%)
Query: 48 IKCCPMCSVPIE---KDEGCAQMLCKRCKHVFCWYCLA------------------SRDY 86
++ CP P+ ++ ++ C RC VFC+ C + D
Sbjct: 224 LQLCPGADCPMVIRVQEPRARRVQCNRCSEVFCFKCRQMYHAPTDCATIRKWLTKCADDS 283
Query: 87 GGATFDSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLA 130
A + S K CP C++ IEK+ GC M C +CKH FCW CL
Sbjct: 284 ETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLG 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 41 ATFDSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRDYGGATF 91
A + S K CP C++ IEK+ GC M C +CKH FCW CL G+ +
Sbjct: 286 ANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEY 336
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 19/98 (19%)
Query: 52 PMCSVPIEKDEGCAQ-MLCKRCKHVFC------------------WYCLASRDYGGATFD 92
P C + ++ E A+ +CK C FC W + D A +
Sbjct: 245 PNCQIIVQSSEISAKRAICKACHTGFCFRCGMDYHAPTDCQVIKKWLTKCADDSETANYI 304
Query: 93 SELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLA 130
S K CP C + IEK+ GC M C CKH FCW CL
Sbjct: 305 SAHTKDCPKCHICIEKNGGCNHMQCFNCKHDFCWMCLG 342
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%)
Query: 41 ATFDSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRDYGGATF 91
A + S K CP C + IEK+ GC M C CKH FCW CL G+ +
Sbjct: 301 ANYISAHTKDCPKCHICIEKNGGCNHMQCFNCKHDFCWMCLGDWKTHGSEY 351
>sp|Q94981|ARI1_DROME Protein ariadne-1 OS=Drosophila melanogaster GN=ari-1 PE=1 SV=2
Length = 503
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 22/140 (15%)
Query: 16 DKGPCKNKLGHSRASVIWHRTQVSGATFDSELIKCCPM--CSVPIEKDEGCAQMLCKRCK 73
D N + +R V + + + ++L++ CP C+ ++ + + +C
Sbjct: 188 DDVTVANLVTDARVRVKYQQLITNSFVECNQLLRWCPSVDCTYAVKVPYAEPRRVHCKCG 247
Query: 74 HVFCWYCLAS------------------RDYGGATFDSELIKCCPMCSVPIEKDEGCAQM 115
HVFC+ C + D + + + K CP CSV IEKD GC M
Sbjct: 248 HVFCFACGENWHDPVKCRWLKKWIKKCDDDSETSNWIAANTKECPRCSVTIEKDGGCNHM 307
Query: 116 LCK--RCKHVFCWYCLASLD 133
+CK CK+ FCW CL S +
Sbjct: 308 VCKNQNCKNEFCWVCLGSWE 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKR--CKHVFCWYCLASRDYGGATF 91
K CP CSV IEKD GC M+CK CK+ FCW CL S + G+++
Sbjct: 289 KECPRCSVTIEKDGGCNHMVCKNQNCKNEFCWVCLGSWEPHGSSW 333
>sp|Q9P3U4|YKX2_SCHPO Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC328.02 PE=3 SV=1
Length = 504
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 63 GCAQMLCKRCKH----------VFCWYCLASRDYGGATFDSELIKCCPMCSVPIEKDEGC 112
C + C C H V W D A + K CP CS IEK+ GC
Sbjct: 245 NCGKQFCFGCGHDNHQPTICPLVKIWLQKCQDDSETANWIHANTKECPKCSTTIEKNGGC 304
Query: 113 AQMLCKRCKHVFCWYCLA 130
M CK+CK+ FCW CL
Sbjct: 305 NHMTCKKCKYEFCWVCLG 322
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLA 82
K CP CS IEK+ GC M CK+CK+ FCW CL
Sbjct: 289 KECPKCSTTIEKNGGCNHMTCKKCKYEFCWVCLG 322
>sp|Q9UBS8|RNF14_HUMAN E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens GN=RNF14 PE=1
SV=1
Length = 474
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 42/126 (33%), Gaps = 45/126 (35%)
Query: 52 PMCSVPIEKDEGCAQMLCKRCKHVFCWYC------------------------------- 80
P C +P+ ++ GC +C C FC C
Sbjct: 312 PCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEAN 371
Query: 81 --LASRDYGGATFDSEL------------IKCCPMCSVPIEKDEGCAQMLCKRCKHVFCW 126
L + YG L K CP C PIEK +GC +M C C FCW
Sbjct: 372 KRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCW 431
Query: 127 YCLASL 132
C+ SL
Sbjct: 432 ICMGSL 437
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLAS 83
K CP C PIEK +GC +M C C FCW C+ S
Sbjct: 402 KSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMGS 436
>sp|P36113|YKZ7_YEAST RING finger protein YKR017C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YKR017C PE=1 SV=1
Length = 551
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 24/43 (55%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRDYGGATF 91
K CP CSV IEK+ GC M+C CK+ FCW C G F
Sbjct: 339 KECPKCSVNIEKNGGCNHMVCSSCKYEFCWICEGPWAPHGKNF 381
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 72 CKHVFCWYCLASRDYGGATFDSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYC 128
CK W A ++ + K CP CSV IEK+ GC M+C CK+ FCW C
Sbjct: 314 CKITTAWVKKARKESEILNWVLSHTKECPKCSVNIEKNGGCNHMVCSSCKYEFCWIC 370
>sp|Q22431|ARI2_CAEEL Probable protein ariadne-2 OS=Caenorhabditis elegans GN=T12E12.1
PE=3 SV=2
Length = 482
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 41 ATFDSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLAS-RDYGGATFDSELIKCC 99
A + S K CP C IEK GC + C RC+H FCW C + +G ++ K
Sbjct: 277 ANYISAHTKDCPQCHSCIEKAGGCNHIQCTRCRHHFCWMCFGDWKSHGSEYYECSRYKEN 336
Query: 100 PMCSVPIEKDEGCAQMLCKRCKHVF 124
P SV E + A+ ++ H F
Sbjct: 337 P--SVAAEANHVKARRALEKYLHYF 359
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%)
Query: 72 CKHVFCWYCLASRDYGGATFDSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLA 130
C+ + W + D A + S K CP C IEK GC + C RC+H FCW C
Sbjct: 260 CETIKQWMTKCADDSETANYISAHTKDCPQCHSCIEKAGGCNHIQCTRCRHHFCWMCFG 318
>sp|Q9P2G1|AKIB1_HUMAN Ankyrin repeat and IBR domain-containing protein 1 OS=Homo sapiens
GN=ANKIB1 PE=1 SV=3
Length = 1089
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCL 81
K C C PI+K+EGC M C +CK+ FCW CL
Sbjct: 517 KPCANCKSPIQKNEGCNHMQCAKCKYDFCWICL 549
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 97 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCL 129
K C C PI+K+EGC M C +CK+ FCW CL
Sbjct: 517 KPCANCKSPIQKNEGCNHMQCAKCKYDFCWICL 549
>sp|Q6ZPS6|AKIB1_MOUSE Ankyrin repeat and IBR domain-containing protein 1 OS=Mus musculus
GN=Ankib1 PE=1 SV=2
Length = 1085
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCL 81
K C C PI+K+EGC M C +CK+ FCW CL
Sbjct: 518 KPCANCKSPIQKNEGCNHMQCAKCKYDFCWICL 550
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 97 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCL 129
K C C PI+K+EGC M C +CK+ FCW CL
Sbjct: 518 KPCANCKSPIQKNEGCNHMQCAKCKYDFCWICL 550
>sp|Q1L8G6|AKIB1_DANRE Ankyrin repeat and IBR domain-containing protein 1 OS=Danio rerio
GN=ankib1 PE=3 SV=1
Length = 1060
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCL 81
K C C PI+K+EGC M C +CK+ FCW CL
Sbjct: 516 KPCANCKSPIQKNEGCNHMQCAKCKYDFCWICL 548
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 97 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCL 129
K C C PI+K+EGC M C +CK+ FCW CL
Sbjct: 516 KPCANCKSPIQKNEGCNHMQCAKCKYDFCWICL 548
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKR-CKHVFCWYCL-ASRDYGGA 89
K CP C PIEK++GC M C C H FCW CL A R + GA
Sbjct: 285 KPCPECKRPIEKNDGCNHMTCSAPCGHEFCWICLKAYRRHSGA 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 97 KCCPMCSVPIEKDEGCAQMLCKR-CKHVFCWYCLAS 131
K CP C PIEK++GC M C C H FCW CL +
Sbjct: 285 KPCPECKRPIEKNDGCNHMTCSAPCGHEFCWICLKA 320
>sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2
SV=2
Length = 485
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 97 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASL 132
K CP C PI+K +GC +M C C FCW C+ SL
Sbjct: 403 KSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSL 438
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLAS 83
K CP C PI+K +GC +M C C FCW C+ S
Sbjct: 403 KSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGS 437
>sp|Q5UQ35|YR811_MIMIV Putative ariadne-like RING finger protein R811 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R811 PE=4 SV=1
Length = 990
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 49 KCCP--MCSVPIEKDEGCAQMLCKRCKHVFCWYC 80
K CP +C +PI KD GC M C CK FCW C
Sbjct: 928 KECPNSLCKIPIIKDGGCNHMECTACKKHFCWLC 961
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 97 KCCP--MCSVPIEKDEGCAQMLCKRCKHVFCWYC 128
K CP +C +PI KD GC M C CK FCW C
Sbjct: 928 KECPNSLCKIPIIKDGGCNHMECTACKKHFCWLC 961
>sp|Q84RR0|ARI7_ARATH Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis thaliana
GN=ARI7 PE=2 SV=1
Length = 562
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCK-RCKHVFCWYCLAS-RDYGGAT 90
K CP C PIEK++GC M C CK+ FCW CL + D+G T
Sbjct: 293 KPCPRCKRPIEKNQGCMHMTCTPPCKYEFCWLCLGAWMDHGERT 336
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 97 KCCPMCSVPIEKDEGCAQMLCK-RCKHVFCWYCLAS 131
K CP C PIEK++GC M C CK+ FCW CL +
Sbjct: 293 KPCPRCKRPIEKNQGCMHMTCTPPCKYEFCWLCLGA 328
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 71 RCKHVFCWYCLASRDYGGATFDSELIKCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYC 128
+CK + W D + + + K CP C V IEKD GC M+C+ CK FCW C
Sbjct: 292 KCKWLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVC 351
Query: 129 LA 130
L
Sbjct: 352 LG 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 33 WHRTQVSGATFDSEL-------IKCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYCLAS 83
W R + DSE K CP C V IEKD GC M+C+ CK FCW CL
Sbjct: 295 WLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGP 354
Query: 84 RDYGGATF 91
+ G+ +
Sbjct: 355 WEPHGSAW 362
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 71 RCKHVFCWYCLASRDYGGATFDSELIKCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYC 128
+CK + W D + + + K CP C V IEKD GC M+C+ CK FCW C
Sbjct: 286 KCKWLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVC 345
Query: 129 LA 130
L
Sbjct: 346 LG 347
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYCLASRDYGGATF 91
K CP C V IEKD GC M+C+ CK FCW CL + G+ +
Sbjct: 312 KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAW 356
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 71 RCKHVFCWYCLASRDYGGATFDSELIKCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYC 128
+CK + W D + + + K CP C V IEKD GC M+C+ CK FCW C
Sbjct: 288 KCKWLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVC 347
Query: 129 LA 130
L
Sbjct: 348 LG 349
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYCLASRDYGGATF 91
K CP C V IEKD GC M+C+ CK FCW CL + G+ +
Sbjct: 314 KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAW 358
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 71 RCKHVFCWYCLASRDYGGATFDSELIKCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYC 128
+CK + W D + + + K CP C V IEKD GC M+C+ CK FCW C
Sbjct: 288 KCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVC 347
Query: 129 LA 130
L
Sbjct: 348 LG 349
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYCLASRDYGGATF 91
K CP C V IEKD GC M+C+ CK FCW CL + G+ +
Sbjct: 314 KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAW 358
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 71 RCKHVFCWYCLASRDYGGATFDSELIKCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYC 128
+CK + W D + + + K CP C V IEKD GC M+C+ CK FCW C
Sbjct: 314 KCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVC 373
Query: 129 LA 130
L
Sbjct: 374 LG 375
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYCLASRDYGGATF 91
K CP C V IEKD GC M+C+ CK FCW CL + G+ +
Sbjct: 340 KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAW 384
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 71 RCKHVFCWYCLASRDYGGATFDSELIKCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYC 128
+CK + W D + + + K CP C V IEKD GC M+C+ CK FCW C
Sbjct: 314 KCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVC 373
Query: 129 LA 130
L
Sbjct: 374 LG 375
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYCLASRDYGGATF 91
K CP C V IEKD GC M+C+ CK FCW CL + G+ +
Sbjct: 340 KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAW 384
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 71 RCKHVFCWYCLASRDYGGATFDSELIKCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYC 128
+CK + W D + + + K CP C V IEKD GC M+C+ CK FCW C
Sbjct: 316 KCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVC 375
Query: 129 LA 130
L
Sbjct: 376 LG 377
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCK--RCKHVFCWYCLASRDYGGATF 91
K CP C V IEKD GC M+C+ CK FCW CL + G+ +
Sbjct: 342 KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAW 386
>sp|Q9SKC2|ARI11_ARATH Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana
GN=ARI11 PE=2 SV=1
Length = 542
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKR-CKHVFCWYCL 81
K CP C PIEK+ GC M C C+H FCW CL
Sbjct: 296 KPCPKCKRPIEKNTGCNHMSCSAPCRHYFCWACL 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 19/80 (23%)
Query: 72 CKHVFCWYC-----------------LASRDYG-GATFDSELIKCCPMCSVPIEKDEGCA 113
C + FCW C L ++D + K CP C PIEK+ GC
Sbjct: 253 CSYKFCWNCCEDAHSPVDCETVSKWLLKNKDESENMNWILAKTKPCPKCKRPIEKNTGCN 312
Query: 114 QMLCKR-CKHVFCWYCLASL 132
M C C+H FCW CL L
Sbjct: 313 HMSCSAPCRHYFCWACLQPL 332
>sp|Q8L829|ARI5_ARATH Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana
GN=ARI5 PE=2 SV=1
Length = 552
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 19/79 (24%)
Query: 72 CKHVFCWYCLASR------DYGGA-----TFDSELI-------KCCPMCSVPIEKDEGCA 113
C H FCW C D G + +SE + K CP C PIEK+ GC
Sbjct: 245 CSHSFCWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANSKPCPKCKRPIEKNHGCM 304
Query: 114 QMLCK-RCKHVFCWYCLAS 131
M C CK FCW CL +
Sbjct: 305 HMTCTPPCKFEFCWLCLNA 323
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCK-RCKHVFCWYCLAS 83
K CP C PIEK+ GC M C CK FCW CL +
Sbjct: 288 KPCPKCKRPIEKNHGCMHMTCTPPCKFEFCWLCLNA 323
>sp|Q6T486|RBRA_DICDI Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium
discoideum GN=rbrA PE=3 SV=1
Length = 520
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 72 CKHVFCWYCLASRDYGGATFDSELIKCCPMCSVPIEKDEGCAQMLCKR----CKHVFCWY 127
C V W AS + T+ K CP C PIEK+ GC M C++ C FCW
Sbjct: 273 CSQVDKWLQKASDESENVTWMLANTKKCPECRSPIEKNGGCMHMTCRKNAGGCGFEFCWL 332
Query: 128 C 128
C
Sbjct: 333 C 333
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKR----CKHVFCWYCLASRDYGGAT 90
K CP C PIEK+ GC M C++ C FCW C G+T
Sbjct: 298 KKCPECRSPIEKNGGCMHMTCRKNAGGCGFEFCWLCRGPWTEHGST 343
>sp|P0C8K8|ARI6_ARATH Putative E3 ubiquitin-protein ligase ARI6 OS=Arabidopsis thaliana
GN=ARI6 PE=5 SV=1
Length = 552
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 19/79 (24%)
Query: 72 CKHVFCWYCLASR------DYGGA-----TFDSELI-------KCCPMCSVPIEKDEGCA 113
C H FCW C D G + +SE + K CP C PIEK+ GC
Sbjct: 247 CSHSFCWNCSEEAHRPVDCDTVGKWILKNSTESENMNWILANSKPCPKCKRPIEKNHGCM 306
Query: 114 QMLCK-RCKHVFCWYCLAS 131
M C CK FCW CL +
Sbjct: 307 HMTCTPPCKFEFCWLCLNA 325
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCK-RCKHVFCWYCLAS 83
K CP C PIEK+ GC M C CK FCW CL +
Sbjct: 290 KPCPKCKRPIEKNHGCMHMTCTPPCKFEFCWLCLNA 325
>sp|Q21209|BARD1_CAEEL BRCA1-associated RING domain protein 1 OS=Caenorhabditis elegans
GN=brd-1 PE=1 SV=3
Length = 702
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 46 ELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRDYGGATFDSELIK-CCPMCSV 104
E +KC +K G Q L CKH +CW C+A+ + S + + CP C+
Sbjct: 17 ECVKC--------KKPRGDLQYLGSSCKHAYCWECIATFQQKPSGKRSSVARHMCPSCAF 68
Query: 105 PIEKDEGCAQMLCKRC 120
P++ + + K C
Sbjct: 69 PLDTSKITEAHMLKTC 84
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
Query: 94 ELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASL 132
E +KC +K G Q L CKH +CW C+A+
Sbjct: 17 ECVKC--------KKPRGDLQYLGSSCKHAYCWECIATF 47
>sp|Q16N38|ZFPL1_AEDAE Zinc finger protein-like 1 homolog OS=Aedes aegypti GN=AAEL012105
PE=3 SV=1
Length = 290
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 44 DSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRDYGGATFDSELIKCCPMCS 103
DS+ CP+C P++ +E C +++ C HVF W CL ++ + CP CS
Sbjct: 46 DSDFDSSCPLCGSPLD-NEDCVRLI---CYHVFHWKCLNAKQQSLPANTAPGGHTCPTCS 101
Query: 104 VPI 106
PI
Sbjct: 102 DPI 104
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 92 DSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLAS 131
DS+ CP+C P++ +E C +++ C HVF W CL +
Sbjct: 46 DSDFDSSCPLCGSPLD-NEDCVRLI---CYHVFHWKCLNA 81
>sp|Q8W468|ARI8_ARATH Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana
GN=ARI8 PE=2 SV=1
Length = 567
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCK-RCKHVFCWYCLAS 83
K CP C PIEK++GC + C CK FCW CL +
Sbjct: 284 KPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGA 319
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 97 KCCPMCSVPIEKDEGCAQMLCK-RCKHVFCWYCLAS 131
K CP C PIEK++GC + C CK FCW CL +
Sbjct: 284 KPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGA 319
>sp|Q9LVW9|ARI4_ARATH Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana
GN=ARI4 PE=5 SV=2
Length = 529
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYC 80
K CP CS PI+K +GC M CK C FCW C
Sbjct: 275 KLCPKCSKPIQKRDGCNHMTCK-CGQHFCWLC 305
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 97 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYC 128
K CP CS PI+K +GC M CK C FCW C
Sbjct: 275 KLCPKCSKPIQKRDGCNHMTCK-CGQHFCWLC 305
>sp|Q9SKC4|ARI10_ARATH Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana
GN=ARI10 PE=2 SV=1
Length = 514
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 46/123 (37%), Gaps = 27/123 (21%)
Query: 33 WHRTQVSGATFDSELIKCCPM--CSVPIEKDEGCAQMLCKRCKHVFCWYCLASRDYGGAT 90
++R + D + +K CP C +E E + C + FCW C S D +
Sbjct: 192 YYRYFLRSYVEDGKKMKWCPSPGCECAVEFGESSGYDVACLCSYRFCWNC--SED-AHSP 248
Query: 91 FDSELI---------------------KCCPMCSVPIEKDEGCAQMLCK-RCKHVFCWYC 128
D E + K CP C PIEK GC M C C H FCW C
Sbjct: 249 VDCETVSKWIFKNQDESENKNWILANSKPCPKCKRPIEKSHGCNHMTCSASCGHRFCWIC 308
Query: 129 LAS 131
S
Sbjct: 309 GKS 311
>sp|Q9LVX0|ARI3_ARATH Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana
GN=ARI3 PE=2 SV=1
Length = 537
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 49 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYC 80
K CP CS PI+K +GC M CK C FCW C
Sbjct: 279 KLCPKCSKPIQKRDGCNLMTCK-CGQHFCWLC 309
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 97 KCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYC 128
K CP CS PI+K +GC M CK C FCW C
Sbjct: 279 KLCPKCSKPIQKRDGCNLMTCK-CGQHFCWLC 309
>sp|Q9WVS6|PRKN2_MOUSE E3 ubiquitin-protein ligase parkin OS=Mus musculus GN=Park2 PE=1
SV=1
Length = 464
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 46 ELIKCCPMCSVPIEKDEGCAQMLC--KRCKHVFCWYC 80
+ K CP C+VPIEK+ GC M C +CK +CW C
Sbjct: 412 KTTKPCPRCNVPIEKNGGCMHMKCPQPQCKLEWCWNC 448
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 94 ELIKCCPMCSVPIEKDEGCAQMLC--KRCKHVFCWYC 128
+ K CP C+VPIEK+ GC M C +CK +CW C
Sbjct: 412 KTTKPCPRCNVPIEKNGGCMHMKCPQPQCKLEWCWNC 448
>sp|Q9JK66|PRKN2_RAT E3 ubiquitin-protein ligase parkin OS=Rattus norvegicus GN=Park2
PE=1 SV=1
Length = 465
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 46 ELIKCCPMCSVPIEKDEGCAQMLC--KRCKHVFCWYC 80
+ K CP C+VPIEK+ GC M C +CK +CW C
Sbjct: 413 KTTKPCPRCNVPIEKNGGCMHMKCPQPQCKLEWCWNC 449
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 94 ELIKCCPMCSVPIEKDEGCAQMLC--KRCKHVFCWYC 128
+ K CP C+VPIEK+ GC M C +CK +CW C
Sbjct: 413 KTTKPCPRCNVPIEKNGGCMHMKCPQPQCKLEWCWNC 449
>sp|Q4R7I8|HAKAI_MACFA E3 ubiquitin-protein ligase Hakai OS=Macaca fascicularis GN=CBLL1
PE=2 SV=1
Length = 490
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 44 DSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRDYGGATFDSELIKCCPMCS 103
D + C C +PI+ +M+ CKHVFC+ C + G K CP CS
Sbjct: 101 DDTPVHFCDKCGLPIKI---YGRMI--PCKHVFCYDCAILHEKKGD-------KMCPGCS 148
Query: 104 VPIEKDEGCAQ 114
P+++ E C +
Sbjct: 149 DPVQRIEQCTR 159
>sp|Q75N03|HAKAI_HUMAN E3 ubiquitin-protein ligase Hakai OS=Homo sapiens GN=CBLL1 PE=1
SV=1
Length = 491
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 44 DSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRDYGGATFDSELIKCCPMCS 103
D + C C +PI+ +M+ CKHVFC+ C + G K CP CS
Sbjct: 102 DDTPVHFCDKCGLPIKI---YGRMI--PCKHVFCYDCAILHEKKGD-------KMCPGCS 149
Query: 104 VPIEKDEGCAQ 114
P+++ E C +
Sbjct: 150 DPVQRIEQCTR 160
>sp|Q9JIY2|HAKAI_MOUSE E3 ubiquitin-protein ligase Hakai OS=Mus musculus GN=Cbll1 PE=1
SV=1
Length = 491
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 44 DSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRDYGGATFDSELIKCCPMCS 103
D + C C +PI+ +M+ CKHVFC+ C + G K CP CS
Sbjct: 102 DDTPVHFCDKCGLPIKV---YGRMI--PCKHVFCYDCAILHEKKGD-------KMCPGCS 149
Query: 104 VPIEKDEGCAQ 114
P+++ E C +
Sbjct: 150 DPVQRIEQCTR 160
>sp|Q5ZHZ4|HAKAI_CHICK E3 ubiquitin-protein ligase Hakai OS=Gallus gallus GN=CBLL1 PE=2
SV=1
Length = 493
Score = 36.2 bits (82), Expect = 0.055, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 44 DSELIKCCPMCSVPIEKDEGCAQMLCKRCKHVFCWYCLASRDYGGATFDSELIKCCPMCS 103
D + C C +PI+ +M+ CKHVFC+ C + G K CP C+
Sbjct: 102 DDTPVHFCDKCGLPIKM---YGRMI--PCKHVFCYDCAILHEKKGD-------KMCPGCN 149
Query: 104 VPIEKDEGCAQ 114
P+++ E C +
Sbjct: 150 EPVQRIEQCVR 160
>sp|Q68772|RPOA_SHFV Replicase polyprotein 1ab OS=Simian hemorrhagic fever virus GN=rep
PE=2 SV=3
Length = 3596
Score = 36.2 bits (82), Expect = 0.063, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 44/117 (37%), Gaps = 30/117 (25%)
Query: 7 LDDFLLRHYDKGPCKNKLGHSRASVIWHR---TQVSGATFDSELIKCCPMCSVPIEKDEG 63
DD+++ D C K G+S R ++VSG F+ + ++ C +C
Sbjct: 2709 FDDWVIGLAD---CARKDGYSFPGPAAFREFFSRVSGYQFEGKEVQVCSICCSTARTTSL 2765
Query: 64 CAQMLCKRCKH-----------VFCWYCLASRDYGGATFDSELIKCCPMCSVPIEKD 109
C LC C H FC + + S C MCS+PI KD
Sbjct: 2766 CGMALCDFCAHRHYHPGCHVLSSFCKHVIGS-------------NTCKMCSIPILKD 2809
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.138 0.495
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,328,203
Number of Sequences: 539616
Number of extensions: 1829810
Number of successful extensions: 6980
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 6558
Number of HSP's gapped (non-prelim): 478
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)