Query psy12860
Match_columns 198
No_of_seqs 167 out of 949
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 21:39:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12860.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12860hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w7j_A Myosin VA; motor protei 100.0 1.6E-33 5.5E-38 269.5 0.3 160 31-194 441-653 (795)
2 1lkx_A Myosin IE heavy chain; 100.0 1.6E-33 5.5E-38 266.3 0.2 161 31-195 390-580 (697)
3 2dfs_A Myosin-5A; myosin-V, in 100.0 7.6E-33 2.6E-37 272.3 0.3 160 31-194 441-653 (1080)
4 2v26_A Myosin VI; calmodulin-b 100.0 1.2E-32 4.1E-37 263.3 0.3 161 31-195 456-657 (784)
5 4anj_A Unconventional myosin-V 100.0 9.6E-33 3.3E-37 270.0 -0.6 161 31-195 460-661 (1052)
6 4db1_A Myosin-7; S1DC, cardiac 100.0 2.1E-32 7.3E-37 261.1 0.9 161 31-195 465-665 (783)
7 1w9i_A Myosin II heavy chain; 100.0 2.2E-32 7.5E-37 260.5 0.2 161 31-195 458-648 (770)
8 1kk8_A Myosin heavy chain, str 100.0 3.6E-32 1.2E-36 261.4 -0.1 161 31-195 464-663 (837)
9 1g8x_A Myosin II heavy chain f 100.0 1.2E-31 4E-36 262.2 0.3 161 31-195 458-648 (1010)
10 1i84_S Smooth muscle myosin he 100.0 1E-31 3.6E-36 266.6 -0.1 160 31-194 468-675 (1184)
11 2ycu_A Non muscle myosin 2C, a 100.0 3.7E-31 1.2E-35 258.6 1.9 161 31-195 437-643 (995)
12 1uap_A Procollagen C-proteinas 99.6 8.9E-17 3E-21 125.5 -1.9 101 93-197 48-149 (154)
13 3hrz_C Cobra venom factor; ser 98.7 5.7E-10 1.9E-14 98.9 -4.0 104 92-198 257-378 (379)
14 2hr0_B Complement C3 alpha' ch 98.3 2.6E-08 8.8E-13 96.8 -2.4 104 92-198 793-914 (915)
15 3cu7_A Complement C5; Mg domai 98.2 1E-07 3.4E-12 97.7 -1.7 103 92-197 1557-1676(1676)
16 3prx_B Cobra venom factor; imm 98.2 7E-08 2.4E-12 98.8 -3.4 104 92-198 1520-1641(1642)
17 4fxk_C Complement C4 gamma cha 98.2 2.3E-07 7.9E-12 79.5 -0.1 90 92-184 170-262 (291)
18 3v96_A Metalloproteinase inhib 97.6 3.7E-06 1.3E-10 67.5 -2.7 100 92-197 15-124 (184)
19 2b39_A C3; thioester, immune d 96.1 7.8E-05 2.7E-09 76.5 -8.2 93 88-183 1534-1631(1661)
20 3cki_B Metalloproteinase inhib 95.6 0.0014 4.6E-08 48.8 -1.1 97 93-197 16-120 (121)
21 2e2d_C TIMP-2, metalloproteina 90.9 0.015 5.3E-07 46.1 -2.6 96 93-197 16-126 (180)
No 1
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=99.97 E-value=1.6e-33 Score=269.50 Aligned_cols=160 Identities=19% Similarity=0.240 Sum_probs=126.5
Q ss_pred cccccccchhhhcccccccccchhhhhhhhhhhhhhhhhhhhhcCceeeeeeeccCccccceee---cccccccc--ccc
Q psy12860 31 IRNKQKLVFEQLCINYANEHLQYYFNQHRAIVGKISEKINTNLCGVVVSTVDFGSGGWRFEFKS---TIVGKISE--KIN 105 (198)
Q Consensus 31 ~e~F~~Ns~eqlcin~~ne~lq~~f~~~vf~~e~~~e~~~y~~Egi~w~~i~f~dN~~cidLde---gi~~~V~~--~~~ 105 (198)
.|+|+.|||||||||||||+|||+|++++|..|| +||.+|||+|.+|+|.||++||||++ ||+++|++ +-+
T Consensus 441 FE~f~~NsFEQlcINyaNEkLQq~Fn~~~F~~Eq----eeY~~EgI~w~~i~f~DN~~~idLie~~~GIlslLDEec~~p 516 (795)
T 1w7j_A 441 FETFEINSFEQFCINYANEKLQQQFNMHVFKLEQ----EEYMKEQIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMP 516 (795)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHTTCCGGGCCCCCCHHHHHHHHSTTSHHHHHHHHHTST
T ss_pred ccccCcCCHHHHHHHhhhHHHHHHHHHHHHHHHH----HHHHhcCCcccccCccccHHHHHHHHhcCCHHHhhhhhccCC
Confidence 4899999999999999999999999999999965 99999999999999999999999987 67777776 344
Q ss_pred chhHHHHHHHHHHhh-ccCC---CCCCCCCceEEEEecCccccCCCCccc-Cccee------eecccC-CC-------C-
Q psy12860 106 LKEWVRFTMNIQSMY-KRAP---DSKLKKGAVYLWIHNKDLQCKCPKIKL-NKPYL------ILGKEK-EG-------N- 165 (198)
Q Consensus 106 ~g~~~~f~~kv~~v~-K~~p---~~ri~rg~F~I~H~AgdV~Y~cp~L~~-~r~yL------Ilg~~~-~~-------~- 165 (198)
.+++.+|+.+++..+ +.+| .|+.....|+|.||||+|+|++.|+.. |+|.| +|..+. .. .
T Consensus 517 ~~tD~~f~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~~v~~lf~~~ 596 (795)
T 1w7j_A 517 KGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDE 596 (795)
T ss_dssp TCCHHHHHHHHHHHHTTTCTTEECCTTCSSEEEEECSSCEEEEECTTHHHHHHCCCCHHHHHHHHTCSSCSHHHHTTC--
T ss_pred CCChHHHHHHHHHHhhccCCccccCCCCCCceEEEecceEEEEechhHHhhccccccHHHHHHHHhccccHHHHHHhccc
Confidence 566899999998887 6654 456667799999999999999999654 67765 232222 10 0
Q ss_pred ------CC----------------------CCcccCcceeEEechHHHHHHHHHHHH
Q psy12860 166 ------QP----------------------SGLTMNAKSIVVEWKDELHDRMRQFQR 194 (198)
Q Consensus 166 ------~~----------------------~~l~~~~~Svv~~wk~sl~~lm~~l~r 194 (198)
.. ..-...+.||+.+|+.||..||..|.+
T Consensus 597 ~~~~~~~~~~~s~~~~~s~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~ 653 (795)
T 1w7j_A 597 EKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNA 653 (795)
T ss_dssp -------------------------------------CCHHHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccccccccccccccccccccccCCCCCcHHHHHHHHHHHHHHHHhc
Confidence 00 001234579999999999999999975
No 2
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=99.97 E-value=1.6e-33 Score=266.33 Aligned_cols=161 Identities=16% Similarity=0.156 Sum_probs=125.9
Q ss_pred cccccccchhhhcccccccccchhhhhhhhhhhhhhhhhhhhhcCceeeeeeeccCccccceee----cccccccc--cc
Q psy12860 31 IRNKQKLVFEQLCINYANEHLQYYFNQHRAIVGKISEKINTNLCGVVVSTVDFGSGGWRFEFKS----TIVGKISE--KI 104 (198)
Q Consensus 31 ~e~F~~Ns~eqlcin~~ne~lq~~f~~~vf~~e~~~e~~~y~~Egi~w~~i~f~dN~~cidLde----gi~~~V~~--~~ 104 (198)
.|+|+.|||||||||||||+|||+|++++|..|| +||.+|||+|.+|+|.||++||||++ ||+++|++ +.
T Consensus 390 FE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~Eq----eeY~~EgI~w~~i~f~dN~~~idLie~kp~GilslLDEec~~ 465 (697)
T 1lkx_A 390 FEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQ----EEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLI 465 (697)
T ss_dssp CCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHH----HHHHHTTCCCCCCCCSCCCHHHHHTTSSSSSHHHHHHHHHHS
T ss_pred ccccCcCCHHHHHHHhhhhHHHHHHHHHHHHHHH----HHHHhcCCcccccCCCCCHHHHHHHhcccCChhhhhHHhhCC
Confidence 4899999999999999999999999999999965 99999999999999999999999987 67788876 34
Q ss_pred cchhHHHHHHHHHHhhccCC---CC------CCCCCceEEEEecCccccCCCCccc-Cccee------eecccCCC----
Q psy12860 105 NLKEWVRFTMNIQSMYKRAP---DS------KLKKGAVYLWIHNKDLQCKCPKIKL-NKPYL------ILGKEKEG---- 164 (198)
Q Consensus 105 ~~g~~~~f~~kv~~v~K~~p---~~------ri~rg~F~I~H~AgdV~Y~cp~L~~-~r~yL------Ilg~~~~~---- 164 (198)
+.+++.+|+.+++..++.+| .+ ......|+|.||||+|+|++.|+.. |+|.| +|..+...
T Consensus 466 p~~tD~~f~~kl~~~~~~~~~f~~~~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~l~~ 545 (697)
T 1lkx_A 466 AKSTDQTFLDSICKQFEKNPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQG 545 (697)
T ss_dssp TTCCHHHHHHHHHHHSSSSTTEECTTTSCCTTSCTTEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHHTCCSHHHHH
T ss_pred CCCChHHHHHHHHHHhcCCCccccCCCCCCCccccCceeeeeeeeEEEEccCChhhhhcccccHHHHHHHhccchHHHHH
Confidence 56668999999998887664 11 1235689999999999999999755 77766 22222110
Q ss_pred --C--CCCCcccCcceeEEechHHHHHHHHHHHHh
Q psy12860 165 --N--QPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195 (198)
Q Consensus 165 --~--~~~~l~~~~~Svv~~wk~sl~~lm~~l~r~ 195 (198)
+ ....-...+.|++.+|+.||..||..|.+-
T Consensus 546 lf~~~~~~~~~~r~~Tv~~~fk~sL~~Lm~~L~~t 580 (697)
T 1lkx_A 546 LFPPTRPEDSKKRPETAGSQFRNAMNALITTLLAC 580 (697)
T ss_dssp HCC-----------CCHHHHHHHHHHHHHHHHTTS
T ss_pred hccccccccccCCCCcHHHHHHHHHHHHHHHHHcc
Confidence 0 001112345799999999999999999753
No 3
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.97 E-value=7.6e-33 Score=272.28 Aligned_cols=160 Identities=19% Similarity=0.252 Sum_probs=127.6
Q ss_pred cccccccchhhhcccccccccchhhhhhhhhhhhhhhhhhhhhcCceeeeeeeccCccccceee---cccccccc--ccc
Q psy12860 31 IRNKQKLVFEQLCINYANEHLQYYFNQHRAIVGKISEKINTNLCGVVVSTVDFGSGGWRFEFKS---TIVGKISE--KIN 105 (198)
Q Consensus 31 ~e~F~~Ns~eqlcin~~ne~lq~~f~~~vf~~e~~~e~~~y~~Egi~w~~i~f~dN~~cidLde---gi~~~V~~--~~~ 105 (198)
.|+|+.|||||||||||||+|||+|++++|..|| +||.+|||+|++|+|.||++||||++ ||+++|++ +-+
T Consensus 441 FE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~Eq----eeY~~EgI~w~~i~f~dn~~~idlie~~~Gil~lLdee~~~p 516 (1080)
T 2dfs_A 441 FETFEINSFEQFCINYANEKLQQQFNMHVFKLEQ----EEYMKEQIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMP 516 (1080)
T ss_dssp CCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHTCCTTCCCCCCCHHHHHHHHSTTSHHHHHHHHTTST
T ss_pred ccccCcCCHHHHHHHhhhHHHHHHHHHHhhHHHH----HHHhhcCCccccccccccHHHHHHHhcCCceeeeccccccCC
Confidence 4899999999999999999999999999999965 99999999999999999999999987 67777776 345
Q ss_pred chhHHHHHHHHHHhh-ccCC---CCCCCCCceEEEEecCccccCCCCccc-Cccee------eeccc-CCC------C--
Q psy12860 106 LKEWVRFTMNIQSMY-KRAP---DSKLKKGAVYLWIHNKDLQCKCPKIKL-NKPYL------ILGKE-KEG------N-- 165 (198)
Q Consensus 106 ~g~~~~f~~kv~~v~-K~~p---~~ri~rg~F~I~H~AgdV~Y~cp~L~~-~r~yL------Ilg~~-~~~------~-- 165 (198)
.+++.+|+.+++..+ +.+| .|+.....|+|.||||+|+|++.|+.. |+|.| +|..+ ... +
T Consensus 517 ~~tD~~f~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~~v~~lf~~~ 596 (1080)
T 2dfs_A 517 KGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDE 596 (1080)
T ss_dssp TCCHHHHHHHHHHHHBTTBSSEECCTTCSSEEEEECSSCEEEEECTTHHHHHBCCCCHHHHHHHHTCSSCSHHHHSCC--
T ss_pred CCChHHHHHHHHHHhhcCCCCccCCCCCCCceEEEecceEEEEehhhHHHhccccccHHHHHHHHcccccHHHHHHhccc
Confidence 567899999998887 6554 456667799999999999999999755 77765 22222 110 0
Q ss_pred ----CC------------------------CCcccCcceeEEechHHHHHHHHHHHH
Q psy12860 166 ----QP------------------------SGLTMNAKSIVVEWKDELHDRMRQFQR 194 (198)
Q Consensus 166 ----~~------------------------~~l~~~~~Svv~~wk~sl~~lm~~l~r 194 (198)
.. ..-...+.||+.+|+.||..||..|..
T Consensus 597 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~sL~~Lm~~L~~ 653 (1080)
T 2dfs_A 597 EKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNA 653 (1080)
T ss_dssp -----------------------------------CCCBHHHHHHHHHHHHHHHHHS
T ss_pred ccccccccccccccccccccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHh
Confidence 00 011234579999999999999999975
No 4
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=99.97 E-value=1.2e-32 Score=263.28 Aligned_cols=161 Identities=17% Similarity=0.204 Sum_probs=125.4
Q ss_pred cccccccchhhhcccccccccchhhhhhhhhhhhhhhhhhhhhcCceeeeeeeccCccccceee----ccccccccc--c
Q psy12860 31 IRNKQKLVFEQLCINYANEHLQYYFNQHRAIVGKISEKINTNLCGVVVSTVDFGSGGWRFEFKS----TIVGKISEK--I 104 (198)
Q Consensus 31 ~e~F~~Ns~eqlcin~~ne~lq~~f~~~vf~~e~~~e~~~y~~Egi~w~~i~f~dN~~cidLde----gi~~~V~~~--~ 104 (198)
.|+|+.|||||||||||||+|||+|++++|..|| +||.+|||+|++|+|.||++||||++ ||+++|++. -
T Consensus 456 FE~f~~NsFEQlcINyaNEkLQq~F~~~~f~~Eq----eeY~~EgI~w~~i~f~DN~~~idLie~kp~GIlslLDEe~~~ 531 (784)
T 2v26_A 456 FEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQ----ELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRL 531 (784)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHH----HHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHS
T ss_pred cccCCcCCHHHHHHHHHHHHHHHHHHHhhhhhHH----HHHHhcCCCcccccccChHHHHHHHhhccccHHHHHHHHhcC
Confidence 4899999999999999999999999999999965 99999999999999999999999987 778888773 3
Q ss_pred cchhHHHHHHHHHHhhccCC---CCCC----------CCCceEEEEecCccccCCCCccc-Cccee------eecccCC-
Q psy12860 105 NLKEWVRFTMNIQSMYKRAP---DSKL----------KKGAVYLWIHNKDLQCKCPKIKL-NKPYL------ILGKEKE- 163 (198)
Q Consensus 105 ~~g~~~~f~~kv~~v~K~~p---~~ri----------~rg~F~I~H~AgdV~Y~cp~L~~-~r~yL------Ilg~~~~- 163 (198)
+.+++.+|+.+++..++.++ .|+. ....|+|.||||+|+|++.|+.. |+|.| +|..+..
T Consensus 532 p~~tD~~f~~kl~~~~~~~~~~~~p~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~ 611 (784)
T 2v26_A 532 PQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDK 611 (784)
T ss_dssp SSCCHHHHHHHHHHHTTTCTTEECGGGCSSGGGTTSCTTSEEEEEETTEEEEEECTTHHHHTBCCCCHHHHHHHHTCSCH
T ss_pred CCCChHHHHHHHHHHhCCCcccccCCCccccccccccCCCceEeeecCccEeeeccCHHHhccchhhHHHHHHHHhchhh
Confidence 45667899999998887653 1211 13479999999999999999655 77766 2222111
Q ss_pred -----------CCCC---CCcccCcceeEEechHHHHHHHHHHHHh
Q psy12860 164 -----------GNQP---SGLTMNAKSIVVEWKDELHDRMRQFQRR 195 (198)
Q Consensus 164 -----------~~~~---~~l~~~~~Svv~~wk~sl~~lm~~l~r~ 195 (198)
.+.. ..-.....||+.+|+.||..||..|.+-
T Consensus 612 ~l~~Lf~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t 657 (784)
T 2v26_A 612 FIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRST 657 (784)
T ss_dssp HHHHHC----------------CCCCBHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHcccccccccCcccCCCCCccccHHHHHHHHHHHHHHHHHcc
Confidence 0000 0112234799999999999999999753
No 5
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=99.97 E-value=9.6e-33 Score=269.98 Aligned_cols=161 Identities=17% Similarity=0.215 Sum_probs=124.8
Q ss_pred cccccccchhhhcccccccccchhhhhhhhhhhhhhhhhhhhhcCceeeeeeeccCccccceee----ccccccccc--c
Q psy12860 31 IRNKQKLVFEQLCINYANEHLQYYFNQHRAIVGKISEKINTNLCGVVVSTVDFGSGGWRFEFKS----TIVGKISEK--I 104 (198)
Q Consensus 31 ~e~F~~Ns~eqlcin~~ne~lq~~f~~~vf~~e~~~e~~~y~~Egi~w~~i~f~dN~~cidLde----gi~~~V~~~--~ 104 (198)
.|+|+.|||||||||||||+|||+|++++|..|| +||.+|||+|++|+|.||++||||++ ||+++|++. -
T Consensus 460 FE~f~~NsFEQLCINyaNEkLQq~Fn~~vF~~Eq----eeY~~EgI~w~~I~f~DN~~~idLie~kp~GIl~lLDEe~~~ 535 (1052)
T 4anj_A 460 FEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQ----ELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRL 535 (1052)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHH----HHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHS
T ss_pred CcccccCcHHHHHHHHHHHHHHHHHHHhhhHHHH----HHHHhcCCCcccCCcCCcHHHHHHHHcCcccHHHHHHHHhcC
Confidence 4899999999999999999999999999999965 99999999999999999999999987 677788762 3
Q ss_pred cchhHHHHHHHHHHhhccCC---CCC---------C-CCCceEEEEecCccccCCCCccc-Cccee------eecccCC-
Q psy12860 105 NLKEWVRFTMNIQSMYKRAP---DSK---------L-KKGAVYLWIHNKDLQCKCPKIKL-NKPYL------ILGKEKE- 163 (198)
Q Consensus 105 ~~g~~~~f~~kv~~v~K~~p---~~r---------i-~rg~F~I~H~AgdV~Y~cp~L~~-~r~yL------Ilg~~~~- 163 (198)
+.+++.+|+.+++..++.++ .++ . ....|+|.||||+|+|++.|+.. |+|.| +|..+..
T Consensus 536 p~~tD~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNrD~l~~~~~~ll~~S~~~ 615 (1052)
T 4anj_A 536 PQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDK 615 (1052)
T ss_dssp SSCCHHHHHHHHHHTTTTCTTEECGGGCSCSTTTTCCTTSEEEEEETTEEEEEECTTHHHHHBCCCCHHHHHHHHTCSCH
T ss_pred CCCcHHHHHHHHHHHhccCccccCCcccccccccccCCCCCeEEEcCCccEEEecCChhhhccccccHHHHHHHHhCCcH
Confidence 45667999999998887653 111 1 13469999999999999999755 77766 2222111
Q ss_pred ----------CC----CCCCcccCcceeEEechHHHHHHHHHHHHh
Q psy12860 164 ----------GN----QPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195 (198)
Q Consensus 164 ----------~~----~~~~l~~~~~Svv~~wk~sl~~lm~~l~r~ 195 (198)
.. ....-.....||+.+|+.||..||..|.+-
T Consensus 616 ~i~~Lf~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t 661 (1052)
T 4anj_A 616 FIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRST 661 (1052)
T ss_dssp HHHHTTCC----------------CCBHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHhhhccccccccccCCCCCCCCccHHHHHHHHHHHHHHHHcCc
Confidence 00 011122345699999999999999999864
No 6
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=99.97 E-value=2.1e-32 Score=261.14 Aligned_cols=161 Identities=18% Similarity=0.214 Sum_probs=122.9
Q ss_pred cccccccchhhhcccccccccchhhhhhhhhhhhhhhhhhhhhcCceeeeeeec-cCccccceee---ccccccccc--c
Q psy12860 31 IRNKQKLVFEQLCINYANEHLQYYFNQHRAIVGKISEKINTNLCGVVVSTVDFG-SGGWRFEFKS---TIVGKISEK--I 104 (198)
Q Consensus 31 ~e~F~~Ns~eqlcin~~ne~lq~~f~~~vf~~e~~~e~~~y~~Egi~w~~i~f~-dN~~cidLde---gi~~~V~~~--~ 104 (198)
.|+|+.|||||||||||||+|||+|++++|..|| +||.+|||+|++|+|. ||++||||++ ||+++|++. -
T Consensus 465 FE~f~~NsFEQlCINyaNEkLQq~Fn~~~F~~Eq----eeY~~EgI~w~~i~f~~Dn~~~idLiekp~Gil~lLDEec~~ 540 (783)
T 4db1_A 465 FEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQ----EEYKKEGIEWTFIDFGMDLQACIDLIEKPMGIMSILEEECMF 540 (783)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHTCCCCCCCGGGGGHHHHHHHHSTTSHHHHHCC-TTC
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHhHHHH----HHhhhcCCCcccccccCChHHHHHHHhCCCchHhhhhHHhcC
Confidence 4999999999999999999999999999999965 9999999999999995 9999999987 777888773 3
Q ss_pred cchhHHHHHHHHHHhh-ccCC---CCCCC----CCceEEEEecCccccCCCCccc-Cccee------eecccCC------
Q psy12860 105 NLKEWVRFTMNIQSMY-KRAP---DSKLK----KGAVYLWIHNKDLQCKCPKIKL-NKPYL------ILGKEKE------ 163 (198)
Q Consensus 105 ~~g~~~~f~~kv~~v~-K~~p---~~ri~----rg~F~I~H~AgdV~Y~cp~L~~-~r~yL------Ilg~~~~------ 163 (198)
+.+++.+|+.+++..+ ..+| .++.. ...|+|.||||+|+|++.|+.. |+|.| +|..+..
T Consensus 541 p~~tD~tf~~kl~~~~~~~~~~f~~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~l 620 (783)
T 4db1_A 541 PKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTL 620 (783)
T ss_dssp TTCCHHHHHHHHHHHHTTTCTTEECCCC----C-CCEEEEETTEEEEECCTTHHHHHHCCCCHHHHHHHHTCSSHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCCCCCccCCCCCCCCCCCCeEEeCcCCceEEeCcChhhhccccccHHHHHHHHHCccHHHHHH
Confidence 4566799999998765 5543 23332 4579999999999999999655 77766 2222111
Q ss_pred -----CCC------CC--CcccCcceeEEechHHHHHHHHHHHHh
Q psy12860 164 -----GNQ------PS--GLTMNAKSIVVEWKDELHDRMRQFQRR 195 (198)
Q Consensus 164 -----~~~------~~--~l~~~~~Svv~~wk~sl~~lm~~l~r~ 195 (198)
... .+ +-.....||+.+|+.||..||..|.+-
T Consensus 621 f~~~~~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t 665 (783)
T 4db1_A 621 FANYAGADAPIEKGKGKAKKGSSFQTVSALHRENLNKLMTNLRST 665 (783)
T ss_dssp HHSCC------------------CCCHHHHHHHHHHHHHHHHHTS
T ss_pred hhccccccccccCccCCCCcCCCCccHHHHHHHHHHHHHHHHHcc
Confidence 000 00 011123789999999999999999863
No 7
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=99.97 E-value=2.2e-32 Score=260.52 Aligned_cols=161 Identities=18% Similarity=0.230 Sum_probs=124.7
Q ss_pred cccccccchhhhcccccccccchhhhhhhhhhhhhhhhhhhhhcCceeeeeeec-cCccccceee-----cccccccc--
Q psy12860 31 IRNKQKLVFEQLCINYANEHLQYYFNQHRAIVGKISEKINTNLCGVVVSTVDFG-SGGWRFEFKS-----TIVGKISE-- 102 (198)
Q Consensus 31 ~e~F~~Ns~eqlcin~~ne~lq~~f~~~vf~~e~~~e~~~y~~Egi~w~~i~f~-dN~~cidLde-----gi~~~V~~-- 102 (198)
.|+|+.|||||||||||||+|||+|++++|..|| +||.+|||+|++|+|. ||++||||++ ||+++|++
T Consensus 458 FE~F~~NsFEQlCINyaNEkLQq~Fn~~~f~~Eq----eeY~~EgI~w~~i~f~~dn~~~idLiek~~p~GilslLDEec 533 (770)
T 1w9i_A 458 FEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQ----EEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQS 533 (770)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTTCCCCCCCGGGGGHHHHHHHHCTTTTCHHHHHHHHH
T ss_pred ccccccCCHHHHHHHhhHHHHHHHHHhhhhHHHH----HHhhccCCCceeeccccCcHHHHHHHhCCCCCchhhhhhhhh
Confidence 4899999999999999999999999999999965 9999999999999995 9999999987 46777776
Q ss_pred cccchhHHHHHHHH-HHhhccCC---CCCCCCCceEEEEecCccccCCCCccc-Cccee------eecccCCC-------
Q psy12860 103 KINLKEWVRFTMNI-QSMYKRAP---DSKLKKGAVYLWIHNKDLQCKCPKIKL-NKPYL------ILGKEKEG------- 164 (198)
Q Consensus 103 ~~~~g~~~~f~~kv-~~v~K~~p---~~ri~rg~F~I~H~AgdV~Y~cp~L~~-~r~yL------Ilg~~~~~------- 164 (198)
+-+.+++.+|+.++ ...+..+| .|+..+..|+|.||||+|+|++.|+.. |+|.| +|..+...
T Consensus 534 ~~p~~tD~~f~~kL~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~Lf~ 613 (770)
T 1w9i_A 534 VFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFN 613 (770)
T ss_dssp SSSSCCHHHHHHHHHHHHTTTSTTEECCSSCSSEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHHTCSSTTHHHHHH
T ss_pred CCCCCChHHHHHHHHHHhcCCCCCccCCCCCCCceEeeccCccccccccChhhhccCcccHHHHHHHHhchHHHHHHHhh
Confidence 33456679999985 44455554 344445789999999999999999755 77776 22222110
Q ss_pred C----CCCCcccCcceeEEechHHHHHHHHHHHHh
Q psy12860 165 N----QPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195 (198)
Q Consensus 165 ~----~~~~l~~~~~Svv~~wk~sl~~lm~~l~r~ 195 (198)
. +..+-.....||+.+|+.||..||..|.+-
T Consensus 614 ~~~~~~~~~k~~~~~Tv~~~fk~sL~~Lm~~L~~t 648 (770)
T 1w9i_A 614 DPNIASRAKKGANFITVAAQYKEQLASLMATLETT 648 (770)
T ss_dssp CHHHHCCCEETTEECCHHHHHHHHHHHHHHHHHTS
T ss_pred ccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHhc
Confidence 0 000011234799999999999999999853
No 8
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=99.96 E-value=3.6e-32 Score=261.35 Aligned_cols=161 Identities=20% Similarity=0.243 Sum_probs=122.3
Q ss_pred cccccccchhhhcccccccccchhhhhhhhhhhhhhhhhhhhhcCceeeeeee-ccCccccceee---ccccccccc--c
Q psy12860 31 IRNKQKLVFEQLCINYANEHLQYYFNQHRAIVGKISEKINTNLCGVVVSTVDF-GSGGWRFEFKS---TIVGKISEK--I 104 (198)
Q Consensus 31 ~e~F~~Ns~eqlcin~~ne~lq~~f~~~vf~~e~~~e~~~y~~Egi~w~~i~f-~dN~~cidLde---gi~~~V~~~--~ 104 (198)
.|+|+.|||||||||||||+|||+|++++|..|| +||.+|||+|++|+| .||++||||++ ||+++|++. -
T Consensus 464 FE~f~~NsFEQlcINyaNEkLQq~Fn~~~f~~Eq----eeY~~EgI~w~~i~f~~dn~~~idLiekp~GIlslLDEec~~ 539 (837)
T 1kk8_A 464 FEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQ----EEYKKEGIAWEFIDFGMDLQMCIDLIEKPMGILSILEEECMF 539 (837)
T ss_dssp CCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHTTCCCCSCCCCHHHHHHHHHHHSTTSHHHHHHHHTTC
T ss_pred ccccccccHHHHHHHHhhHHHHHHHHHhhhHHHH----HHhhhcCCceeecccccCHHHHHHHHhcCCcHHHHHHHHhcC
Confidence 4899999999999999999999999999999965 999999999999999 49999999987 777788763 3
Q ss_pred cchhHHHHHHHH-HHhhccCC---CCCC------CCCceEEEEecCccccCCCCccc-Cccee------eecccCC----
Q psy12860 105 NLKEWVRFTMNI-QSMYKRAP---DSKL------KKGAVYLWIHNKDLQCKCPKIKL-NKPYL------ILGKEKE---- 163 (198)
Q Consensus 105 ~~g~~~~f~~kv-~~v~K~~p---~~ri------~rg~F~I~H~AgdV~Y~cp~L~~-~r~yL------Ilg~~~~---- 163 (198)
+.+++.+|+.++ ...++.+| .++. ....|+|.||||+|+|++.|+.. |+|.| +|..+..
T Consensus 540 p~~tD~tf~~kl~~~~~~~~~~f~~p~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~ 619 (837)
T 1kk8_A 540 PKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVA 619 (837)
T ss_dssp TTCCHHHHHHHHHHHHTTTCSSEECCCSCSSTTCCCCSEEEEETTEEEEECCSSHHHHHSCCCCHHHHHHHHTCSSHHHH
T ss_pred CCCChHHHHHHHHHHhcCCCcCccCCCccccccccCCceEEeeccCcccccHHHHHHhccccccHHHHHHHHhchHHHHH
Confidence 456679999985 44455543 2333 25689999999999999999755 77766 2222111
Q ss_pred ----CCC----CCCc----ccCcceeEEechHHHHHHHHHHHHh
Q psy12860 164 ----GNQ----PSGL----TMNAKSIVVEWKDELHDRMRQFQRR 195 (198)
Q Consensus 164 ----~~~----~~~l----~~~~~Svv~~wk~sl~~lm~~l~r~ 195 (198)
... .+.- ...+.||+.+|+.||..||..|..-
T Consensus 620 ~Lf~~~~~~~g~~~~~k~~~~~~~Tv~~~fk~sL~~Lm~~L~~t 663 (837)
T 1kk8_A 620 ELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYST 663 (837)
T ss_dssp HHTCC------------------CCHHHHHHHHHHHHHHHHTTE
T ss_pred HHhcccccccCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHcc
Confidence 000 0000 0235799999999999999999753
No 9
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.96 E-value=1.2e-31 Score=262.19 Aligned_cols=161 Identities=19% Similarity=0.247 Sum_probs=127.6
Q ss_pred cccccccchhhhcccccccccchhhhhhhhhhhhhhhhhhhhhcCceeeeeeec-cCccccceee-----cccccccc--
Q psy12860 31 IRNKQKLVFEQLCINYANEHLQYYFNQHRAIVGKISEKINTNLCGVVVSTVDFG-SGGWRFEFKS-----TIVGKISE-- 102 (198)
Q Consensus 31 ~e~F~~Ns~eqlcin~~ne~lq~~f~~~vf~~e~~~e~~~y~~Egi~w~~i~f~-dN~~cidLde-----gi~~~V~~-- 102 (198)
.|+|+.|||||||||||||+|||+|++++|..|| +||.+|||+|++|+|. ||++||||++ ||+++|++
T Consensus 458 FE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~Eq----eeY~~EgI~w~~i~f~~dn~~~idlie~~~~~Gil~lLdee~ 533 (1010)
T 1g8x_A 458 FEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQ----EEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQS 533 (1010)
T ss_dssp CCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHTTCCCCCCCCCCCSHHHHHHHHCTTTTCHHHHHHHHT
T ss_pred cccCCcCcHHHHHHHhhhHHHHHHHHHHhhHHHH----HHhhccCCCccccccccChHHHHHHHhcCCCCeeehhhhHHh
Confidence 4899999999999999999999999999999965 9999999999999996 9999999987 46777776
Q ss_pred cccchhHHHHHHHHHHhhc-cCC---CCCCCCCceEEEEecCccccCCCCccc-Cccee------eecccCCC------C
Q psy12860 103 KINLKEWVRFTMNIQSMYK-RAP---DSKLKKGAVYLWIHNKDLQCKCPKIKL-NKPYL------ILGKEKEG------N 165 (198)
Q Consensus 103 ~~~~g~~~~f~~kv~~v~K-~~p---~~ri~rg~F~I~H~AgdV~Y~cp~L~~-~r~yL------Ilg~~~~~------~ 165 (198)
+-+.+++.+|+.+++..+. .+| .|+..++.|+|.||||+|+|++.|+.. |+|.| +|..+... +
T Consensus 534 ~~p~~td~~f~~kl~~~~~~~~~~f~~~~~~~~~F~i~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~~~~lf~ 613 (1010)
T 1g8x_A 534 VFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFN 613 (1010)
T ss_dssp TSSSCCHHHHHHHHHHHHTTTCTTEECCTTCSSEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHTTCSCHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHHhcCCCCCcccCCCCCCCEEEeeeceEEEEeecCccccccccccHHHHHHHHhCcHHHHHHHhc
Confidence 3345667999999998887 654 355556799999999999999999755 77766 22222110 0
Q ss_pred C-----CCCcccCcceeEEechHHHHHHHHHHHHh
Q psy12860 166 Q-----PSGLTMNAKSIVVEWKDELHDRMRQFQRR 195 (198)
Q Consensus 166 ~-----~~~l~~~~~Svv~~wk~sl~~lm~~l~r~ 195 (198)
. ..+-.....||+.+|+.||..||..|..-
T Consensus 614 ~~~~~~~~~k~~~~~tv~~~fk~sL~~Lm~~L~~t 648 (1010)
T 1g8x_A 614 DPNIASRAKKGANFITVAAQYKEQLASLMATLETT 648 (1010)
T ss_dssp CHHHHSCCCCSSSCCCHHHHHHHHHHHHHHHHTTS
T ss_pred ccccccCCCCCCCCCchHHHHHHHHHHHHHHHHhc
Confidence 0 01112245899999999999999999753
No 10
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.96 E-value=1e-31 Score=266.63 Aligned_cols=160 Identities=19% Similarity=0.222 Sum_probs=124.6
Q ss_pred cccccccchhhhcccccccccchhhhhhhhhhhhhhhhhhhhhcCceeeeeeec-cCccccceee------ccccccccc
Q psy12860 31 IRNKQKLVFEQLCINYANEHLQYYFNQHRAIVGKISEKINTNLCGVVVSTVDFG-SGGWRFEFKS------TIVGKISEK 103 (198)
Q Consensus 31 ~e~F~~Ns~eqlcin~~ne~lq~~f~~~vf~~e~~~e~~~y~~Egi~w~~i~f~-dN~~cidLde------gi~~~V~~~ 103 (198)
.|+|+.|||||||||||||+|||+|++++|..|| +||.+|||+|++|+|. ||++||||++ ||+++|++.
T Consensus 468 FE~f~~NsfeQlciNy~nEkLq~~f~~~~f~~eq----~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gil~lLdee 543 (1184)
T 1i84_S 468 FEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQ----EEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEE 543 (1184)
T ss_dssp CCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHH----HHHHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCHHHHHHHT
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHHhhhHHHH----HHHHhcCCCccccccCCCcHHHHHHHhCCCCCCCchhhhhhh
Confidence 4899999999999999999999999999999965 9999999999999995 9999999976 667777763
Q ss_pred --ccchhHHHHHHHHHHhhccCC---CCCC--CCCceEEEEecCccccCCCCccc-Cccee------eecccCC------
Q psy12860 104 --INLKEWVRFTMNIQSMYKRAP---DSKL--KKGAVYLWIHNKDLQCKCPKIKL-NKPYL------ILGKEKE------ 163 (198)
Q Consensus 104 --~~~g~~~~f~~kv~~v~K~~p---~~ri--~rg~F~I~H~AgdV~Y~cp~L~~-~r~yL------Ilg~~~~------ 163 (198)
-+.+++.+|+.+++..++.+| .|+. ....|+|.||||+|+|++.|+.. |+|.| +|..+..
T Consensus 544 ~~~p~~td~~~~~kl~~~~~~~~~~~~~~~~~~~~~F~i~Hyag~V~Y~~~gfl~kN~d~l~~~~~~ll~~s~~~~~~~l 623 (1184)
T 1i84_S 544 CWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADL 623 (1184)
T ss_dssp TSCTTCCHHHHHHHHHHHTSSCTTEEECSSCTTTCEEEEECSSCEEEEECTTHHHHHHCCCCHHHHHHHHTCSCHHHHHH
T ss_pred hCCCCCChHHHHHHHHHHhCCCCCccCCCCCCCCCcEEEECCCceEEeccCCchhhccCcccHHHHHHHHhCchHHHHHH
Confidence 345678999999998887664 2433 35689999999999999999655 77766 1221111
Q ss_pred --C-C---C---------C--CC----cccCcceeEEechHHHHHHHHHHHH
Q psy12860 164 --G-N---Q---------P--SG----LTMNAKSIVVEWKDELHDRMRQFQR 194 (198)
Q Consensus 164 --~-~---~---------~--~~----l~~~~~Svv~~wk~sl~~lm~~l~r 194 (198)
. . + . ++ -.....||+.+|+.||..||..|..
T Consensus 624 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~~l~~L~~~l~~ 675 (1184)
T 1i84_S 624 WKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRN 675 (1184)
T ss_dssp HSCCTTCCCC---------------------CCCHHHHHHHHHHHHHHHHTT
T ss_pred hccccccccccccccccccccCccccccCCCCCcHHHHHHHHHHHHHHHHHh
Confidence 0 0 0 0 00 0112378999999999999999975
No 11
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.96 E-value=3.7e-31 Score=258.63 Aligned_cols=161 Identities=17% Similarity=0.183 Sum_probs=124.8
Q ss_pred cccccccchhhhcccccccccchhhhhhhhhhhhhhhhhhhhhcCceeeeeee-ccCccccceee------ccccccccc
Q psy12860 31 IRNKQKLVFEQLCINYANEHLQYYFNQHRAIVGKISEKINTNLCGVVVSTVDF-GSGGWRFEFKS------TIVGKISEK 103 (198)
Q Consensus 31 ~e~F~~Ns~eqlcin~~ne~lq~~f~~~vf~~e~~~e~~~y~~Egi~w~~i~f-~dN~~cidLde------gi~~~V~~~ 103 (198)
.|+|+.|||||||||||||+|||+|++++|..|| +||.+|||+|++|+| .||++||||++ ||+++|++.
T Consensus 437 FE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~Eq----eeY~~EgI~w~~i~f~~dn~~~idlie~~~~p~Gil~lLdee 512 (995)
T 2ycu_A 437 FEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQ----EEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEE 512 (995)
T ss_dssp BCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHH----HHHHHTTCCCCCCCCSCCCHHHHHHHHCCSSSCCHHHHHHHS
T ss_pred ccccccchHHHHHHHhhHHHHHHHHHHhhhHHHH----HHHhccCCCccccccccChHHHHHHHhccCCCCchhhhhHHH
Confidence 4899999999999999999999999999999965 999999999999999 59999999976 467777763
Q ss_pred --ccchhHHHHHHHHHHhhccCC---CCCCC--CCceEEEEecCccccCCCCccc-Cccee------eecccCC------
Q psy12860 104 --INLKEWVRFTMNIQSMYKRAP---DSKLK--KGAVYLWIHNKDLQCKCPKIKL-NKPYL------ILGKEKE------ 163 (198)
Q Consensus 104 --~~~g~~~~f~~kv~~v~K~~p---~~ri~--rg~F~I~H~AgdV~Y~cp~L~~-~r~yL------Ilg~~~~------ 163 (198)
-+.+++.+|+.++...+..+| .|+.. ...|+|.||||+|+|++.|+.. |+|.| +|..+..
T Consensus 513 ~~~p~~tD~~f~~kl~~~~~~~~~f~~~~~~~~~~~F~i~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~v~~l 592 (995)
T 2ycu_A 513 CWFPKATDKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRLTAEI 592 (995)
T ss_dssp SSSTTCCHHHHHHHHHHHHTTSTTEECCCTTTCCSSEEEEETTEEEEECCTTHHHHHHCCCCHHHHHHHHTCSSHHHHHH
T ss_pred hcCCCCchHHHHHHHHHhcCCCCCcccCCccCCCCeeEEECCCCCccccccchhhhccccccHHHHHHHHhCcHHHHHHH
Confidence 345668999999888886654 23332 4689999999999999999655 67765 1221111
Q ss_pred --CCC------------C---C--CcccCcceeEEechHHHHHHHHHHHHh
Q psy12860 164 --GNQ------------P---S--GLTMNAKSIVVEWKDELHDRMRQFQRR 195 (198)
Q Consensus 164 --~~~------------~---~--~l~~~~~Svv~~wk~sl~~lm~~l~r~ 195 (198)
... . + +-...+.||+.+|+.||..||..|..-
T Consensus 593 f~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~tv~~~fk~sL~~Lm~~L~~t 643 (995)
T 2ycu_A 593 WKDVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNT 643 (995)
T ss_dssp TSSCCSSCSCCC-------------CCCSSCCHHHHHHHHHHHHHHHHHTS
T ss_pred hhcccccccccccccccccccccCcCCCCCCchHHHHHHHHHHHHHHHHhc
Confidence 000 0 0 011234799999999999999999753
No 12
>1uap_A Procollagen C-proteinase enhancer protein; beta barrel, protein binding; NMR {Homo sapiens} SCOP: b.40.3.3
Probab=99.57 E-value=8.9e-17 Score=125.53 Aligned_cols=101 Identities=18% Similarity=0.300 Sum_probs=88.9
Q ss_pred eeccccccccccc-chhHHHHHHHHHHhhccCCCCCCCCCceEEEEecCccccCCCCcccCcceeeecccCCCCCCCCcc
Q psy12860 93 KSTIVGKISEKIN-LKEWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQPSGLT 171 (198)
Q Consensus 93 degi~~~V~~~~~-~g~~~~f~~kv~~v~K~~p~~ri~rg~F~I~H~AgdV~Y~cp~L~~~r~yLIlg~~~~~~~~~~l~ 171 (198)
||||.+.|.+.+. .|+|..|+++|.++||.+ ...++++.-.+|....+..|.||.|..++.|||||..+++ ++-+
T Consensus 48 DFVI~g~V~~~~~~~g~s~~~tVsv~~VyK~g-~l~lr~~g~~~~v~~~~~cckCP~lr~G~~YLIMG~vd~~---g~gv 123 (154)
T 1uap_A 48 SLVVTATVKSMVREPGEGLAVTVSLIGAYKTG-GLDLPSPPTGASLKFYVPCKQCPPMKKGVSYLLMGQVEEN---RGPV 123 (154)
T ss_dssp SEEEEEEEEEEEECSTTCEEEEECCCEEEEET-TCCCCSSCSCCCEEEEESCSSSSCCCTTCEEEEEEEEETT---TEEE
T ss_pred ceEEEEEEEEEeecCCceEEEEEEEEEEeecC-ccceeeCCceEEEEcccCCCCCCccccCCeEEEEeccCCC---CCce
Confidence 8999999988765 678999999999999987 6778877667888888889999999999999999986543 2339
Q ss_pred cCcceeEEechHHHHHHHHHHHHhcC
Q psy12860 172 MNAKSIVVEWKDELHDRMRQFQRRGC 197 (198)
Q Consensus 172 ~~~~Svv~~wk~sl~~lm~~l~r~~~ 197 (198)
+++.|+|.+|++.|+++|++|+++.|
T Consensus 124 l~p~SfV~~wk~~~~r~L~~l~kk~C 149 (154)
T 1uap_A 124 LPPESFVVLHRPNQDQILTNLSKRKC 149 (154)
T ss_dssp CCTTCEEEECCHHHHHHHHHHHHSCC
T ss_pred eCCccEEEehhhHHHHHHHHHhcCCC
Confidence 99999999999999999999999998
No 13
>3hrz_C Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_B* 3hs0_C*
Probab=98.67 E-value=5.7e-10 Score=98.95 Aligned_cols=104 Identities=13% Similarity=0.231 Sum_probs=79.5
Q ss_pred eeecccccccccccchhHHHHHHHHHHhhccCCCCCCCCCceEEEEecCccccCC-CCcccCcceeeecccCCC---CCC
Q psy12860 92 FKSTIVGKISEKINLKEWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKC-PKIKLNKPYLILGKEKEG---NQP 167 (198)
Q Consensus 92 Ldegi~~~V~~~~~~g~~~~f~~kv~~v~K~~p~~ri~rg~F~I~H~AgdV~Y~c-p~L~~~r~yLIlg~~~~~---~~~ 167 (198)
.|||..+.|.+.+..++|..|++.|..++|.+ ...+.+|+... |.....|.| ++|.+|+.|||||.++.. ...
T Consensus 257 ~dYvykv~v~~~~~~~~~~~y~~~I~~V~K~G-~d~~~~g~~r~--fi~~~~C~~~l~L~~gk~YLImG~~~~~~~~~~~ 333 (379)
T 3hrz_C 257 VDYVYKTKLLRIEEQDGNDIYVMDVLEVIKQG-TDENPRAKTHQ--YISQRKCQEALNLKVNDDYLIWGSRSDLLPTKDK 333 (379)
T ss_dssp CCEEEEEEEEEEEEETTEEEEEEEEEEEEECC-SCSCGGGSCEE--EEEEGGGHHHHCCCTTCEEEEEECGGGBCCCTTS
T ss_pred cceEEEEEEEEEeecCCeEEEEEEEEEEEecC-CcccCCCCeEE--EEecccCCcccCCCCCCEEEEeccCccccccCCc
Confidence 47888888888877788999999999999987 45566776333 333458999 799999999999986551 234
Q ss_pred CCcccCcceeEEechHH--------------HHHHHHHHHHhcCC
Q psy12860 168 SGLTMNAKSIVVEWKDE--------------LHDRMRQFQRRGCT 198 (198)
Q Consensus 168 ~~l~~~~~Svv~~wk~s--------------l~~lm~~l~r~~~~ 198 (198)
.++++|..|++.+|++. |...+..+.-.+|.
T Consensus 334 ~~Y~l~~~Twve~Wp~~~~c~~~~~~~~c~~l~~f~~~~~~~GC~ 378 (379)
T 3hrz_C 334 ISYIITKNTWIERWPHEDECQEEEFQKLCDDFAQFSYTLTEFGCP 378 (379)
T ss_dssp EEEECCTTCEEEEECCTGGGGSTTTHHHHHHHHHHHHHHHHHCCC
T ss_pred cEEEECCCcEEEECCChhhhcChhHHHHHHHHHHHHHHHHHcCCC
Confidence 57899999999999765 55555666666663
No 14
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=98.34 E-value=2.6e-08 Score=96.82 Aligned_cols=104 Identities=14% Similarity=0.291 Sum_probs=81.3
Q ss_pred eeecccccccccccchhHHHHHHHHHHhhccCCCCCCCCCceEEEEecCccccCC-CCcccCcceeeecccCC---CCCC
Q psy12860 92 FKSTIVGKISEKINLKEWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKC-PKIKLNKPYLILGKEKE---GNQP 167 (198)
Q Consensus 92 Ldegi~~~V~~~~~~g~~~~f~~kv~~v~K~~p~~ri~rg~F~I~H~AgdV~Y~c-p~L~~~r~yLIlg~~~~---~~~~ 167 (198)
.|||+.+.|.+.+..++|..|+++|.+|+|.+ .....+|. .+.|.....|.| ++|.+|+.|||||.+.. ....
T Consensus 793 ~dy~~kv~v~~~~~~~~~~~y~~~i~~v~k~g-~d~~~~~~--~r~f~~~~~C~~~~~l~~g~~YLimG~~~~~~~~~~~ 869 (915)
T 2hr0_B 793 VDYVYKTRLVKVQLSNDFDEYIMAIEQTIKSG-SDEVQVGQ--QRTFISPIKCREALKLEEKKHYLMWGLSSDFWGEKPN 869 (915)
T ss_dssp EEEEEEEEEEEEEECSSEEEEEEEEEEEEECC-SSCCCTTC--EEEEEEEGGGHHHHCCCTTCEEEEEEEGGGEESCSSS
T ss_pred ccEEEEEEEEEEeccCCeEEEEEEEEEEEecC-CccccCCC--eeEEEEcccCcccCCCCCCCEEEEeccCCcccccCCc
Confidence 67899899988777788999999999999987 44555565 233335559999 99999999999997443 1234
Q ss_pred CCcccCcceeEEechH--------------HHHHHHHHHHHhcCC
Q psy12860 168 SGLTMNAKSIVVEWKD--------------ELHDRMRQFQRRGCT 198 (198)
Q Consensus 168 ~~l~~~~~Svv~~wk~--------------sl~~lm~~l~r~~~~ 198 (198)
.+++++.+|++.+|++ .|......+.-.+|.
T Consensus 870 ~~y~l~~~t~ve~wp~~~~c~~~~~~~~~~~~~~~~~~~~~~gc~ 914 (915)
T 2hr0_B 870 LSYIIGKDTWVEHWPEEDECQDEENQKQCQDLGAFTESMVVFGCP 914 (915)
T ss_dssp CEEECCTTCEEEEECCGGGTTSTTTHHHHHHHHHHHHHHHTSCCC
T ss_pred eeEEeCCCcEEEECCChhhccChhhHHHHHHHHHHHHHHHHcCCC
Confidence 5789999999999986 677777777777774
No 15
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=98.21 E-value=1e-07 Score=97.74 Aligned_cols=103 Identities=17% Similarity=0.306 Sum_probs=78.6
Q ss_pred eeecccccccccccchhHHHHHHHHHHhhccCCCCCCCCCceEEEEecCccccCCCCcccCcceeeecccCCC--CC---
Q psy12860 92 FKSTIVGKISEKINLKEWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEG--NQ--- 166 (198)
Q Consensus 92 Ldegi~~~V~~~~~~g~~~~f~~kv~~v~K~~p~~ri~rg~F~I~H~AgdV~Y~cp~L~~~r~yLIlg~~~~~--~~--- 166 (198)
.|||+.+.|.+.+..++|..|+++|.+++|.+ ...+.+|.. +.|.....|.|++|.+|+.|||||.+... ..
T Consensus 1557 ~dy~~~v~v~~~~~~~~~~~y~~~i~~v~k~g-~d~~~~~~~--~~f~~~~~C~~~~l~~g~~YLimG~~~~~~~~~~~~ 1633 (1676)
T 3cu7_A 1557 IAYAYKVSITSITVENVFVKYKATLLDIYKTG-EAVAEKDSE--ITFIKKVTCTNAELVKGRQYLIMGKEALQIKYNFSF 1633 (1676)
T ss_dssp CCEEEEEEEEECCCSSSCCEEEEEEEEEEECC-TTCCCTTCC--EEEECCTTCTTCCCCSSCCCEEEESCCCCCCCSSCC
T ss_pred ccEEEEEEEEEeeccCCeEEEEEEEEEEEecC-CccccCCCe--eEEEecCCCCCCCCcCCCEEEEECCCCcccCCCccc
Confidence 68999999988887888999999999999988 445666753 33446669999999999999999954321 12
Q ss_pred CCCcccCcceeEEechH------------HHHHHHHHHHHhcC
Q psy12860 167 PSGLTMNAKSIVVEWKD------------ELHDRMRQFQRRGC 197 (198)
Q Consensus 167 ~~~l~~~~~Svv~~wk~------------sl~~lm~~l~r~~~ 197 (198)
+.++++|..|++.+|++ .|......+.-.+|
T Consensus 1634 ~~~y~l~~~t~ve~wp~~~~c~~~~~~~~~~~~~~~~~~~~gc 1676 (1676)
T 3cu7_A 1634 RYIYPLDSLTWIEYWPRDTTCSSCQAFLANLDEFAEDIFLNGC 1676 (1676)
T ss_dssp CCCBCCCSSCCCBCCCSSSSSSSCCHHHHTTTHHHHHHTTSCC
T ss_pred ceEEEeCCCcEEEECCChHHhhhHHHHHHHHHHHHHHHhhCCC
Confidence 35899999999999997 45555555554444
No 16
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=98.18 E-value=7e-08 Score=98.75 Aligned_cols=104 Identities=13% Similarity=0.245 Sum_probs=80.5
Q ss_pred eeecccccccccccchhHHHHHHHHHHhhccCCCCCCCCCceEEEEecCccccCC-CCcccCcceeeecccCC---CCCC
Q psy12860 92 FKSTIVGKISEKINLKEWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKC-PKIKLNKPYLILGKEKE---GNQP 167 (198)
Q Consensus 92 Ldegi~~~V~~~~~~g~~~~f~~kv~~v~K~~p~~ri~rg~F~I~H~AgdV~Y~c-p~L~~~r~yLIlg~~~~---~~~~ 167 (198)
.|||..+.|.+.+..++|..|+++|.+++|.+ ...+.+|+. ++|.....|.| ++|.+|+.|||||.+.. ....
T Consensus 1520 ~dYvykv~v~~~~~~~~~~~y~~~i~~V~K~g-~d~~~~g~~--r~f~~~~~C~~~l~L~~gk~YLImG~~~~~~~~~~~ 1596 (1642)
T 3prx_B 1520 VDYVYKTKLLRIEEQDGNDIYVMDVLEVIKQG-TDENPRAKT--HQYISQRKCQEALNLKVNDDYLIWGSRSDLLPTKDK 1596 (1642)
T ss_dssp CCEEEEEEEEEEEEETTEEEEEEEEEEEEECC-SSSCTTTSC--EEEEEEGGGHHHHCCCTTCEEEEEECGGGEECCSSS
T ss_pred ccEEEEEEEEEEeccCCeEEEEEEEEEEEecC-CccccCCCe--EEEEecCcCCCccCCCCCCEEEEeecCccccccCCc
Confidence 47888888888887888999999999999987 456777763 33333448999 79999999999998655 1234
Q ss_pred CCcccCcceeEEechHH--------------HHHHHHHHHHhcCC
Q psy12860 168 SGLTMNAKSIVVEWKDE--------------LHDRMRQFQRRGCT 198 (198)
Q Consensus 168 ~~l~~~~~Svv~~wk~s--------------l~~lm~~l~r~~~~ 198 (198)
.++++|.+|++.+|++. |...+..+.-.+|.
T Consensus 1597 ~~y~l~~~twve~Wp~~~~c~~~~~~~~c~~l~~f~~~~~~~gC~ 1641 (1642)
T 3prx_B 1597 ISYIITKNTWIERWPHEDECQEEEFQKLCDDFAQFSYTLTEFGCP 1641 (1642)
T ss_dssp EEEECCTTCEEEECCCTTGGGSTTTHHHHHHHHHHHHHHHTSCCC
T ss_pred eEEEECCceEEEECCChhhhcChhhHHHHHHHHHHHHHHHHcCCC
Confidence 57899999999999764 66666666666773
No 17
>4fxk_C Complement C4 gamma chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_C*
Probab=98.16 E-value=2.3e-07 Score=79.48 Aligned_cols=90 Identities=16% Similarity=0.214 Sum_probs=66.7
Q ss_pred eeecccccccccccchhHHHHHHHHHHhhccCCCCCCCCCceEEEEecCccccCCCCcccCcceeeecccCCC---CCCC
Q psy12860 92 FKSTIVGKISEKINLKEWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEG---NQPS 168 (198)
Q Consensus 92 Ldegi~~~V~~~~~~g~~~~f~~kv~~v~K~~p~~ri~rg~F~I~H~AgdV~Y~cp~L~~~r~yLIlg~~~~~---~~~~ 168 (198)
.|||..+.|.+....+++..|.+.|..+++.+....+..|. ++.|....+|++ +|.+|++|||||.+..- .+..
T Consensus 170 ~dYvykv~v~~~~~~~~~~~y~~~I~~Vik~g~d~~~~~~~--~r~F~~~~~C~l-~L~~gk~YLImG~~~~~~~~~~~~ 246 (291)
T 4fxk_C 170 VEYGFQVKVLREDSRAAFRLFETKITQVLHFTKDVKAAANQ--MRNFLVRASCRL-RLEPGKEYLIMGLDGATYDLEGHP 246 (291)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEEEEEEECSSCTTCCSSC--EEEEEEETTSCC-CCCTTCEEEEECCCCSCBCTTSCB
T ss_pred cEEEEEEEEEEEEecCCeEEEEEEEEEEEeccccccccCCC--EEEEEecCCCCC-CcccCCEEEEeecCCCccccCCCE
Confidence 46788888877766677888889999999987333444454 445555568985 89999999999986652 1234
Q ss_pred CcccCcceeEEechHH
Q psy12860 169 GLTMNAKSIVVEWKDE 184 (198)
Q Consensus 169 ~l~~~~~Svv~~wk~s 184 (198)
+++++..|++..|...
T Consensus 247 ~Y~L~~~TwvE~WP~~ 262 (291)
T 4fxk_C 247 QYLLDSNSWIEEMPSE 262 (291)
T ss_dssp EEECCSSCEEEECCCH
T ss_pred EEEcCCCcEEEECCCc
Confidence 6899999999999743
No 18
>3v96_A Metalloproteinase inhibitor 1; metzincin, OB-fold, metalloproteinase, protease inhibitor, H inhibitor-hydrolase complex; 1.90A {Homo sapiens} PDB: 1uea_B 1d2b_A 1oo9_B 2j0t_D 3ma2_B
Probab=97.56 E-value=3.7e-06 Score=67.50 Aligned_cols=100 Identities=18% Similarity=0.314 Sum_probs=66.6
Q ss_pred eeecccccccccccch---hHHHHHHHHHHhhccCCCCCCC--CCceEEEEecCccccCCCC--cccCcceeeecccCCC
Q psy12860 92 FKSTIVGKISEKINLK---EWVRFTMNIQSMYKRAPDSKLK--KGAVYLWIHNKDLQCKCPK--IKLNKPYLILGKEKEG 164 (198)
Q Consensus 92 Ldegi~~~V~~~~~~g---~~~~f~~kv~~v~K~~p~~ri~--rg~F~I~H~AgdV~Y~cp~--L~~~r~yLIlg~~~~~ 164 (198)
-|+||.+.|.+....+ .+.+|.++|.++||.. . .+. ++.-.||..+-+..|.|+- +.++++|||+|+..
T Consensus 15 sD~VirakVl~~~~~~~~~~~~~Y~Vki~kvfK~~-~-~~~~~~~~~~l~Tp~s~s~CG~~~~~~~~g~eYLIaG~~~-- 90 (184)
T 3v96_A 15 SDLVIRAKFVGTPEVAQTTLYQRYEIKMTKMYKGF-Q-ALGDAADIRFVYTPAMESVCGYFHRSHNRSEEFLIAGKLQ-- 90 (184)
T ss_dssp CSEEEEEEEC------CCCSEEEEEEEEEEEEECC----------CCEEEEESSGGGTCCCCCCCCTTCEEEEEEEEE--
T ss_pred CCEEEEEEEeeeeecCCCCcceEEEEEEEEEEcCC-c-cccccCCccEEEeCcccccCCcccccCCCCceEEEEEEcc--
Confidence 3789999998754332 3678999999999865 2 242 2323688888888999863 34699999999875
Q ss_pred CCCCCcccCcceeEEechH---HHHHHHHHHHHhcC
Q psy12860 165 NQPSGLTMNAKSIVVEWKD---ELHDRMRQFQRRGC 197 (198)
Q Consensus 165 ~~~~~l~~~~~Svv~~wk~---sl~~lm~~l~r~~~ 197 (198)
.+++.++.-+++.+|++ .-.+-++...+.+|
T Consensus 91 --~g~L~i~~Cs~v~pW~~lt~~Qrkgl~~~Y~~gC 124 (184)
T 3v96_A 91 --DGLLHITTCSFVAPWNSLSLAQRRGFTKTYTVGC 124 (184)
T ss_dssp --TTEEECCTTSCEEEGGGSCHHHHHHHHTTGGGTT
T ss_pred --CCeEEEecCCceeEhHHCCHHHHhhhHHHHhcCC
Confidence 35899999999999965 33344444445555
No 19
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=96.05 E-value=7.8e-05 Score=76.53 Aligned_cols=93 Identities=14% Similarity=0.182 Sum_probs=65.6
Q ss_pred ccc-ceeecccccccccccchhHHHHHHHHHHhhccCCCCCCCCCceEEEEecCccccCC-CCcccCcceeeecccCCC-
Q psy12860 88 WRF-EFKSTIVGKISEKINLKEWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKC-PKIKLNKPYLILGKEKEG- 164 (198)
Q Consensus 88 ~ci-dLdegi~~~V~~~~~~g~~~~f~~kv~~v~K~~p~~ri~rg~F~I~H~AgdV~Y~c-p~L~~~r~yLIlg~~~~~- 164 (198)
.|- .+|||..+.|.+....+++..|.+.|..++|.+..... .+. .+.|....+|.+ .+|.+|+.|||||.+..-
T Consensus 1534 ac~~~~~y~y~~~v~~~~~~~~~~~y~~~i~~v~k~g~d~~~-~~~--~r~f~~~~~C~~~~~l~~g~~ylimg~~~~~~ 1610 (1661)
T 2b39_A 1534 ACEPGVDYVYKTRLIQKKLEDDFDEYIMVIENIIKSGSDEVQ-VKQ--ERKFISHIKCREALKLKEGAHYLVWGVSSDLW 1610 (1661)
T ss_dssp TSSTTEEEEEEEEEEEEECCSSEEEEEEEEEEECSCCTTCCC-SSS--CCEEEEETTTHHHHCCCTTCEEEEEEESTTBC
T ss_pred hccccCcEEEEEEEEEEeccCCeeEEEEEEEEeeecCCcccc-CCC--eEEEEEccccccccCCCCCCEEEEeccCCccc
Confidence 454 46788888887766666678888888999998732222 232 222334447887 789999999999975441
Q ss_pred --CCCCCcccCcceeEEechH
Q psy12860 165 --NQPSGLTMNAKSIVVEWKD 183 (198)
Q Consensus 165 --~~~~~l~~~~~Svv~~wk~ 183 (198)
....+++++..|++..|..
T Consensus 1611 ~~~~~~~y~l~~~tw~e~wp~ 1631 (1661)
T 2b39_A 1611 GEKPKISYIIGKDTWVELWPE 1631 (1661)
T ss_dssp SBTTBCCEECCTTCBCCCCCC
T ss_pred ccCCceEEEeCCCcEEEECCC
Confidence 1234789999999999985
No 20
>3cki_B Metalloproteinase inhibitor 3; extra-cellular matrix, catalytic zinc, SA-SB loop, alternative splicing, cleavage on PAIR of basic residues; 2.30A {Homo sapiens}
Probab=95.56 E-value=0.0014 Score=48.80 Aligned_cols=97 Identities=20% Similarity=0.354 Sum_probs=62.0
Q ss_pred eecccccccccccch----hHHHHHHHHHHhhccCCCCCCCCCceEEEEecCccccCCCCcccC-cceeeecccCCCCCC
Q psy12860 93 KSTIVGKISEKINLK----EWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLN-KPYLILGKEKEGNQP 167 (198)
Q Consensus 93 degi~~~V~~~~~~g----~~~~f~~kv~~v~K~~p~~ri~rg~F~I~H~AgdV~Y~cp~L~~~-r~yLIlg~~~~~~~~ 167 (198)
|+|+.+.|.+....+ ...+|.+++..+||.++ ++..-. .||-.+-+-.|.| .|..+ .+|||+|+..+
T Consensus 16 DfVirakv~~~~~~~~~~~~~~~y~vk~~k~~K~~~--~~~~~~-~l~t~~~~~~Cg~-~l~~~~~~YLI~G~~~d---- 87 (121)
T 3cki_B 16 DIVIRAKVVGKKLVKEGPFGTLVYTIKQMKMYRGFT--KMPHVQ-YIHTEASESLCGL-KLEVNKYQYLLTGRVYD---- 87 (121)
T ss_dssp SEEECCEEEEEEEECCSSSCEEEEEEECCCEEECTT--TSSSCC-EEEEESCGGGTCC-CCCTTCCCEEEEEEECS----
T ss_pred CEEEEEEEEeEEEecCCCcceEEEEEEEEEEEcCCC--cCCcce-EEEeCCCCCCCCc-ccccCCeEEEEEEEecC----
Confidence 678888776532111 23456666677888652 222222 5666665556666 67775 79999998653
Q ss_pred CCcccCcceeEEechH---HHHHHHHHHHHhcC
Q psy12860 168 SGLTMNAKSIVVEWKD---ELHDRMRQFQRRGC 197 (198)
Q Consensus 168 ~~l~~~~~Svv~~wk~---sl~~lm~~l~r~~~ 197 (198)
+.+.++.=+.+.+|.. ...+-++...+.+|
T Consensus 88 g~l~i~~C~~i~~W~~ls~~qk~~~~~~Y~~gC 120 (121)
T 3cki_B 88 GKMYTGLCNFVERWDQLTLSQRKGLNYRYHLGC 120 (121)
T ss_dssp SCEECCTTSCCEETTTCCHHHHHHHHTTTTCTT
T ss_pred CEEEEeccCcEeEchhCCHHHHHHHHHHHhcCC
Confidence 3577887889999943 45566666666666
No 21
>2e2d_C TIMP-2, metalloproteinase inhibitor 2; matrix metalloproteinase/MMP, collagenase, tissue inhibitor of metalloproteinases/TIMP, complex, flexibility; 2.00A {Bos taurus} SCOP: b.40.3.1 PDB: 1bqq_T 1buv_T 1br9_A 1gxd_C 2tmp_A
Probab=90.90 E-value=0.015 Score=46.12 Aligned_cols=96 Identities=18% Similarity=0.398 Sum_probs=59.8
Q ss_pred eecccccccccc--cch--------hHHHHHHHHHHhhccCCCCCCCCCceEEEEecCccccCCCCcccC--cceeeecc
Q psy12860 93 KSTIVGKISEKI--NLK--------EWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLN--KPYLILGK 160 (198)
Q Consensus 93 degi~~~V~~~~--~~g--------~~~~f~~kv~~v~K~~p~~ri~rg~F~I~H~AgdV~Y~cp~L~~~--r~yLIlg~ 160 (198)
|+++.+.|.+.. ..| ...+|.+++.++||.. .. .. ..|+-.+-+-.|.+ .|.++ .+|||+|+
T Consensus 16 D~VirakVl~~~~~~~g~d~~g~~~~~~~Y~Vkv~kvfKg~-~~---~~-~~v~Tp~~~s~CG~-~l~~g~~~eYLi~G~ 89 (180)
T 2e2d_C 16 DIVIRAKAVNKKEVDSGNDIYGNPIKRIQYEIKQIKMFKGP-DQ---DI-EFIYTAPAAAVCGV-SLDIGGKKEYLIAGK 89 (180)
T ss_dssp SEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEESC-SS---CC-CEEEECSCGGGTCC-CCCCSSSCEEEEEEE
T ss_pred CEEEEEEEEeeeeeccCCcccCCCcceEEEEEEEEEEEcCC-CC---Cc-eEEEeCCCCccCCc-eeccCCceeEEEEEE
Confidence 566777766531 111 2456777777889865 22 12 25666666667888 57777 99999998
Q ss_pred cCCCCCCCCcccCcceeEEechH---HHHHHHHHHHHhcC
Q psy12860 161 EKEGNQPSGLTMNAKSIVVEWKD---ELHDRMRQFQRRGC 197 (198)
Q Consensus 161 ~~~~~~~~~l~~~~~Svv~~wk~---sl~~lm~~l~r~~~ 197 (198)
... .+.|.++-=+.+.+|.+ .-.+-++...+.+|
T Consensus 90 ~~~---dG~L~i~lC~~i~pW~~ls~~Qr~gl~~~Y~~gC 126 (180)
T 2e2d_C 90 AEG---NGNMHITLCDFIVPWDTLSATQKKSLNHRYQMGC 126 (180)
T ss_dssp ECS---TTEEECCTTSCEEEGGGSCHHHHHHTTTHHHHHT
T ss_pred eCC---CCeEEEeccCCEEEhHHCCHHHHhhhHhhccCCC
Confidence 653 23577888899999954 23333444444444
Done!