Your job contains 1 sequence.
>psy12860
MQKPKSLKKKKKKKKKRKKKKKKKKKKKKKIRNKQKLVFEQLCINYANEHLQYYFNQHRA
IVGKISEKINTNLCGVVVSTVDFGSGGWRFEFKSTIVGKISEKINLKEWVRFTMNIQSMY
KRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQPSGLTMNAKSIVVE
WKDELHDRMRQFQRRGCT
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12860
(198 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q90923 - symbol:NTN3 "Netrin-3" species:9031 "G... 228 6.0e-20 2
UNIPROTKB|F1NK85 - symbol:NTN1 "Netrin-1" species:9031 "G... 234 1.2e-19 1
UNIPROTKB|F1NEW2 - symbol:NTN1 "Netrin-1" species:9031 "G... 228 5.1e-19 1
UNIPROTKB|Q90922 - symbol:NTN1 "Netrin-1" species:9031 "G... 218 3.6e-18 2
ZFIN|ZDB-GENE-990415-169 - symbol:ntn1a "netrin 1a" speci... 224 1.2e-17 1
UNIPROTKB|Q2HXW4 - symbol:NTN1 "Netrin-1" species:9823 "S... 212 2.4e-16 1
UNIPROTKB|F1N0C7 - symbol:NTN1 "Uncharacterized protein" ... 212 2.4e-16 1
UNIPROTKB|O95631 - symbol:NTN1 "Netrin-1" species:9606 "H... 212 2.4e-16 1
MGI|MGI:105088 - symbol:Ntn1 "netrin 1" species:10090 "Mu... 212 2.4e-16 1
UNIPROTKB|F1LPC8 - symbol:Ntn1 "Netrin-1" species:10116 "... 212 2.4e-16 1
ZFIN|ZDB-GENE-990415-168 - symbol:ntn1b "netrin 1b" speci... 195 1.1e-15 2
FB|FBgn0015774 - symbol:NetB "Netrin-B" species:7227 "Dro... 205 2.2e-15 1
UNIPROTKB|F1PSP7 - symbol:NTN1 "Uncharacterized protein" ... 203 2.2e-15 1
ZFIN|ZDB-GENE-050310-2 - symbol:ntn2 "netrin 2" species:7... 199 6.0e-15 1
RGD|619809 - symbol:Ntn1 "netrin 1" species:10116 "Rattus... 194 2.1e-14 1
WB|WBGene00006746 - symbol:unc-6 species:6239 "Caenorhabd... 186 1.5e-13 1
UNIPROTKB|P34710 - symbol:unc-6 "Netrin unc-6" species:62... 186 1.5e-13 1
FB|FBgn0015773 - symbol:NetA "Netrin-A" species:7227 "Dro... 187 1.6e-13 1
UNIPROTKB|E2R3Q6 - symbol:NTN3 "Uncharacterized protein" ... 136 3.4e-08 1
UNIPROTKB|G3N0E7 - symbol:NTN3 "Uncharacterized protein" ... 130 1.5e-07 1
UNIPROTKB|F1SUI0 - symbol:NTN3 "Uncharacterized protein" ... 130 1.5e-07 1
UNIPROTKB|G3V6X3 - symbol:Ntn3 "Netrin 2-like (Chicken)" ... 130 1.5e-07 1
RGD|1565197 - symbol:Ntn5 "netrin 5" species:10116 "Rattu... 128 1.7e-07 1
MGI|MGI:1341188 - symbol:Ntn3 "netrin 3" species:10090 "M... 125 2.6e-06 1
UNIPROTKB|O00634 - symbol:NTN3 "Netrin-3" species:9606 "H... 124 4.0e-06 1
UNIPROTKB|G5E6L9 - symbol:NTN5 "Uncharacterized protein" ... 115 7.9e-05 1
UNIPROTKB|F1MF28 - symbol:NTN5 "Uncharacterized protein" ... 115 9.1e-05 1
UNIPROTKB|E2RRE4 - symbol:NTN5 "Uncharacterized protein" ... 108 0.00076 1
>UNIPROTKB|Q90923 [details] [associations]
symbol:NTN3 "Netrin-3" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007520 "myoblast fusion"
evidence=IDA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0006355 GO:GO:0005578 PROSITE:PS00022 GO:GO:0007520
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 EMBL:L34550 IPI:IPI00581364 PIR:B54665
UniGene:Gga.792 ProteinModelPortal:Q90923 STRING:Q90923
InParanoid:Q90923 OrthoDB:EOG4VHK67 Uniprot:Q90923
Length = 581
Score = 228 (85.3 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 41/96 (42%), Positives = 62/96 (64%)
Query: 100 ISEKINLKEWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILG 159
I E + W +FT+NI S+YK D ++K+G +LWIH KDL CKCPKI+++K YL++G
Sbjct: 478 ILEMETVANWAKFTINILSVYK-CRDERVKRGDNFLWIHLKDLSCKCPKIQISKKYLVMG 536
Query: 160 KEKEGNQPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
+ GL + S+V++W+D R+R+ QRR
Sbjct: 537 ISENSTDRPGLMADKNSLVIQWRDAWTRRLRKLQRR 572
Score = 40 (19.1 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 52 QYYFNQHRAIVGKISE 67
QYY +Q R I GK S+
Sbjct: 147 QYYSSQCRKIYGKPSK 162
>UNIPROTKB|F1NK85 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI00819575 Ensembl:ENSGALT00000039263 Uniprot:F1NK85
Length = 330
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 55 FNQHRAIVGK-ISEKINTNLCGVVVSTVDFGS------GGWRFEFKSTIVGKISEKINLK 107
F Q R+ V ISE C + S D S G ++ K ++N+
Sbjct: 170 FQQSRSPVAPCISESCARTTCTLCSSPADCDSYCKPAKGNYKINMKKYCKKDYVVQVNIL 229
Query: 108 E------WVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKE 161
E W +FT+NI S+YK D ++K+G +LWIH KDL CKCPKI+++K YL++G
Sbjct: 230 EMETVANWAKFTINILSVYK-CRDERVKRGDNFLWIHLKDLSCKCPKIQISKKYLVMGIS 288
Query: 162 KEGNQPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
+ GL + S+V++W+D R+R+ QRR
Sbjct: 289 ENSTDRPGLMADKNSLVIQWRDAWTRRLRKLQRR 322
>UNIPROTKB|F1NEW2 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI01017205 Ensembl:ENSGALT00000014992 OMA:THKKACK
Uniprot:F1NEW2
Length = 336
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 41/96 (42%), Positives = 62/96 (64%)
Query: 100 ISEKINLKEWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILG 159
I E + W +FT+NI S+YK D ++K+G +LWIH KDL CKCPKI+++K YL++G
Sbjct: 233 ILEMETVANWAKFTINILSVYK-CRDERVKRGDNFLWIHLKDLSCKCPKIQISKKYLVMG 291
Query: 160 KEKEGNQPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
+ GL + S+V++W+D R+R+ QRR
Sbjct: 292 ISENSTDRPGLMADKNSLVIQWRDAWTRRLRKLQRR 327
>UNIPROTKB|Q90922 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071944 "cell
periphery" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005578 PROSITE:PS00022 GO:GO:0071944 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:L34549 IPI:IPI00570611 PIR:A54665
RefSeq:NP_990750.1 UniGene:Gga.794 ProteinModelPortal:Q90922
IntAct:Q90922 STRING:Q90922 GeneID:396389 KEGG:gga:396389
eggNOG:NOG237372 HOVERGEN:HBG006464 KO:K06843 NextBio:20816431
Uniprot:Q90922
Length = 606
Score = 218 (81.8 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 37/88 (42%), Positives = 61/88 (69%)
Query: 108 EWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQP 167
+W +FT+NI S+YK+ ++L++G LW+H KD+ CKCPK+K K YL+LG ++
Sbjct: 511 DWWKFTVNIISVYKQG-SNRLRRGDQTLWVHAKDIACKCPKVKPMKKYLLLGSTEDSPDQ 569
Query: 168 SGLTMNAKSIVVEWKDELHDRMRQFQRR 195
SG+ + S+V++W+D R+R+FQ+R
Sbjct: 570 SGIIADKSSLVIQWRDTWARRLRKFQQR 597
Score = 34 (17.0 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 77 VVSTVDFGSGGWRFEFKSTIVGKISEK 103
+ ++D+G F+F ST K+ K
Sbjct: 163 IYKSMDYGKTWVPFQFYSTQCRKMYNK 189
>ZFIN|ZDB-GENE-990415-169 [details] [associations]
symbol:ntn1a "netrin 1a" species:7955 "Danio rerio"
[GO:0033564 "anterior/posterior axon guidance" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0016525
"negative regulation of angiogenesis" evidence=IMP] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IGI]
InterPro:IPR001134 PROSITE:PS50189 ZFIN:ZDB-GENE-990415-169
GO:GO:0005576 GO:GO:0016358 GO:GO:0001569 GO:GO:0016525
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0048665
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 HOVERGEN:HBG006464 KO:K06843
HOGENOM:HOG000286017 OMA:NCHTCDA GO:GO:0033564 EMBL:BX255899
EMBL:AF002717 EMBL:CU638812 IPI:IPI00500311 RefSeq:NP_571104.1
UniGene:Dr.545 STRING:O42140 Ensembl:ENSDART00000027806
Ensembl:ENSDART00000148565 GeneID:30227 KEGG:dre:30227 CTD:30227
InParanoid:O42140 NextBio:20806684 Uniprot:O42140
Length = 603
Score = 224 (83.9 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 38/88 (43%), Positives = 63/88 (71%)
Query: 108 EWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQP 167
EW +FT+NI S+YK+ +S++++G +LW+ KD+ CKCPKIK K YL+LG +++
Sbjct: 508 EWWKFTVNIISVYKQG-ESRIRRGDQFLWVRAKDVACKCPKIKSGKKYLLLGNDEDSPGQ 566
Query: 168 SGLTMNAKSIVVEWKDELHDRMRQFQRR 195
SG+ + S+V++W+D R+R+FQ+R
Sbjct: 567 SGMVADKGSLVIQWRDTWARRLRKFQQR 594
>UNIPROTKB|Q2HXW4 [details] [associations]
symbol:NTN1 "Netrin-1" species:9823 "Sus scrofa"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0006915 GO:GO:0005578 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4H19V9 EMBL:DQ368597
RefSeq:NP_001038013.1 UniGene:Ssc.22870 ProteinModelPortal:Q2HXW4
STRING:Q2HXW4 GeneID:733599 KEGG:ssc:733599 CTD:180961
Uniprot:Q2HXW4
Length = 600
Score = 212 (79.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 37/88 (42%), Positives = 61/88 (69%)
Query: 108 EWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQP 167
+W +FT+NI S+YK+ S++++G LWI ++D+ CKCPKIK K YL+LG ++
Sbjct: 509 DWWKFTVNIISVYKQGA-SRIRRGDQNLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQ 567
Query: 168 SGLTMNAKSIVVEWKDELHDRMRQFQRR 195
SG+ + S+V++W+D R+R+FQ+R
Sbjct: 568 SGIVADKSSLVIQWRDTWARRLRKFQQR 595
>UNIPROTKB|F1N0C7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0030517 "negative regulation of axon extension" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
GO:GO:0016337 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 CTD:9423 OMA:NCHTCDA
EMBL:DAAA02048825 EMBL:DAAA02048826 EMBL:DAAA02048827
EMBL:DAAA02048828 EMBL:DAAA02048829 EMBL:DAAA02048830
EMBL:DAAA02048831 IPI:IPI00704401 RefSeq:NP_001179495.1
UniGene:Bt.88333 Ensembl:ENSBTAT00000016103 GeneID:522767
KEGG:bta:522767 NextBio:20873588 Uniprot:F1N0C7
Length = 603
Score = 212 (79.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 37/88 (42%), Positives = 61/88 (69%)
Query: 108 EWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQP 167
+W +FT+NI S+YK+ S++++G LWI ++D+ CKCPKIK K YL+LG ++
Sbjct: 508 DWWKFTVNIISVYKQGT-SRIRRGDQNLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQ 566
Query: 168 SGLTMNAKSIVVEWKDELHDRMRQFQRR 195
SG+ + S+V++W+D R+R+FQ+R
Sbjct: 567 SGIVADKSSLVIQWRDTWARRLRKFQQR 594
>UNIPROTKB|O95631 [details] [associations]
symbol:NTN1 "Netrin-1" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0060603 "mammary
gland duct morphogenesis" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0006915 GO:GO:0007411 GO:GO:0001764
GO:GO:0005576 GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0030334 Reactome:REACT_111155 GO:GO:0016337 PROSITE:PS01186
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
KO:K06843 EMBL:U75586 EMBL:GU727649 EMBL:AC090610 EMBL:AC005695
IPI:IPI00006732 RefSeq:NP_004813.2 UniGene:Hs.660885
ProteinModelPortal:O95631 SMR:O95631 DIP:DIP-46273N IntAct:O95631
STRING:O95631 PhosphoSite:O95631 PaxDb:O95631 PRIDE:O95631
Ensembl:ENST00000173229 Ensembl:ENST00000538852
Ensembl:ENST00000546090 GeneID:9423 KEGG:hsa:9423 UCSC:uc002glw.4
CTD:9423 GeneCards:GC17P008865 H-InvDB:HIX0039241 HGNC:HGNC:8029
MIM:601614 neXtProt:NX_O95631 PharmGKB:PA31813 eggNOG:NOG244580
HOGENOM:HOG000286017 InParanoid:O95631 OMA:NCHTCDA
OrthoDB:EOG4H19V9 PhylomeDB:O95631 ChEMBL:CHEMBL1741307
GenomeRNAi:9423 NextBio:35298 ArrayExpress:O95631 Bgee:O95631
CleanEx:HS_NTN1 Genevestigator:O95631 GermOnline:ENSG00000065320
Uniprot:O95631
Length = 604
Score = 212 (79.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 37/88 (42%), Positives = 61/88 (69%)
Query: 108 EWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQP 167
+W +FT+NI S+YK+ S++++G LWI ++D+ CKCPKIK K YL+LG ++
Sbjct: 509 DWWKFTVNIISVYKQGT-SRIRRGDQSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQ 567
Query: 168 SGLTMNAKSIVVEWKDELHDRMRQFQRR 195
SG+ + S+V++W+D R+R+FQ+R
Sbjct: 568 SGIVADKSSLVIQWRDTWARRLRKFQQR 595
>MGI|MGI:105088 [details] [associations]
symbol:Ntn1 "netrin 1" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;IMP] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IMP;IDA] [GO:0030517 "negative regulation of
axon extension" evidence=IDA] [GO:0030879 "mammary gland
development" evidence=IGI] [GO:0033564 "anterior/posterior axon
guidance" evidence=IMP] [GO:0040023 "establishment of nucleus
localization" evidence=IDA] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0045773 "positive regulation of axon extension"
evidence=IDA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IGI] [GO:0071944 "cell periphery" evidence=ISO]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:105088 GO:GO:0005737
GO:GO:0006915 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 GO:GO:0042472 GO:GO:0071944 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 EMBL:CH466601 GO:GO:0030517 Reactome:REACT_137402
SMART:SM00643 GO:GO:0060603 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00690000102103
HOVERGEN:HBG006464 KO:K06843 CTD:9423 eggNOG:NOG244580
HOGENOM:HOG000286017 OMA:NCHTCDA OrthoDB:EOG4H19V9 EMBL:U65418
EMBL:AF128865 EMBL:AL669842 EMBL:AL606831 EMBL:AL662894
EMBL:BC141294 EMBL:U23505 IPI:IPI00114257 RefSeq:NP_032770.2
UniGene:Mm.39095 ProteinModelPortal:O09118 SMR:O09118 IntAct:O09118
STRING:O09118 PhosphoSite:O09118 PRIDE:O09118
Ensembl:ENSMUST00000021284 Ensembl:ENSMUST00000108674 GeneID:18208
KEGG:mmu:18208 InParanoid:B1ARR0 NextBio:293590 Bgee:O09118
CleanEx:MM_NTN1 Genevestigator:O09118 GermOnline:ENSMUSG00000020902
Uniprot:O09118
Length = 604
Score = 212 (79.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 37/88 (42%), Positives = 61/88 (69%)
Query: 108 EWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQP 167
+W +FT+NI S+YK+ S++++G LWI ++D+ CKCPKIK K YL+LG ++
Sbjct: 509 DWWKFTVNIISVYKQGT-SRIRRGDQSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQ 567
Query: 168 SGLTMNAKSIVVEWKDELHDRMRQFQRR 195
SG+ + S+V++W+D R+R+FQ+R
Sbjct: 568 SGIVADKSSLVIQWRDTWARRLRKFQQR 595
>UNIPROTKB|F1LPC8 [details] [associations]
symbol:Ntn1 "Netrin-1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0040023 "establishment of nucleus
localization" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 RGD:619809
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0016337
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 OMA:NCHTCDA IPI:IPI00205229
RefSeq:NP_446183.2 Ensembl:ENSRNOT00000005255 GeneID:114523
KEGG:rno:114523 ArrayExpress:F1LPC8 Uniprot:F1LPC8
Length = 604
Score = 212 (79.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 37/88 (42%), Positives = 61/88 (69%)
Query: 108 EWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQP 167
+W +FT+NI S+YK+ S++++G LWI ++D+ CKCPKIK K YL+LG ++
Sbjct: 509 DWWKFTVNIISVYKQGT-SRIRRGDQSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQ 567
Query: 168 SGLTMNAKSIVVEWKDELHDRMRQFQRR 195
SG+ + S+V++W+D R+R+FQ+R
Sbjct: 568 SGIVADKSSLVIQWRDTWARRLRKFQQR 595
>ZFIN|ZDB-GENE-990415-168 [details] [associations]
symbol:ntn1b "netrin 1b" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0016358
"dendrite development" evidence=IGI] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-990415-168 GO:GO:0005576
GO:GO:0016358 GO:GO:2001240 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 HSSP:P02468
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 EMBL:AF017420
IPI:IPI00512636 RefSeq:NP_571073.1 UniGene:Dr.75773
ProteinModelPortal:O42203 STRING:O42203 PRIDE:O42203 GeneID:30192
KEGG:dre:30192 CTD:30192 InParanoid:O42203 NextBio:20806657
ArrayExpress:O42203 Bgee:O42203 Uniprot:O42203
Length = 602
Score = 195 (73.7 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 36/90 (40%), Positives = 60/90 (66%)
Query: 108 EWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQ- 166
EW +FT+NI S+YK+ ++++G LW+ KD+ CKCPKIK + YL++G ++E +
Sbjct: 508 EWWKFTINIISVYKQG-GHRIRRGDQLLWVRAKDVACKCPKIKPGRKYLLMGSDEEEDSR 566
Query: 167 -PSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
SG+ + S+++ WKD R+R+FQ+R
Sbjct: 567 GQSGVVADRGSLLIPWKDLWARRLRKFQQR 596
Score = 34 (17.0 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 77 VVSTVDFGSGGWRFEFKSTIVGKISEK 103
+ ++D+G F+F ST K+ K
Sbjct: 160 IFKSMDYGKTWVPFQFYSTQCKKMYNK 186
>FB|FBgn0015774 [details] [associations]
symbol:NetB "Netrin-B" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0016200
"synaptic target attraction" evidence=TAS] [GO:0007411 "axon
guidance" evidence=IGI;ISS;NAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISS] [GO:0070983 "dendrite guidance"
evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0008039 "synaptic target recognition"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 GO:GO:0007432 SMART:SM00643
GO:GO:0016200 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG244580 GeneTree:ENSGT00700000104042
GO:GO:2000289 EMBL:U60317 EMBL:U63737 RefSeq:NP_001162753.1
RefSeq:NP_001162754.1 RefSeq:NP_001162755.1 RefSeq:NP_001245668.1
RefSeq:NP_001245669.1 RefSeq:NP_511155.1 UniGene:Dm.3913
ProteinModelPortal:Q24568 SMR:Q24568 MINT:MINT-1334555
STRING:Q24568 PRIDE:Q24568 EnsemblMetazoa:FBtr0073940
EnsemblMetazoa:FBtr0302016 EnsemblMetazoa:FBtr0302017
EnsemblMetazoa:FBtr0302018 EnsemblMetazoa:FBtr0304874
EnsemblMetazoa:FBtr0304875 GeneID:32400 KEGG:dme:Dmel_CG10521
CTD:32400 FlyBase:FBgn0015774 InParanoid:Q24568 OMA:NECKMCQ
OrthoDB:EOG43R22P PhylomeDB:Q24568 GenomeRNAi:32400 NextBio:778273
Bgee:Q24568 GermOnline:CG10521 Uniprot:Q24568
Length = 793
Score = 205 (77.2 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 101 SEKINLK---EWVRFTMNIQSMYKRAP-----DSKLKKGAVYLWIHNKDLQCKCPKIKLN 152
+EK +++ E ++ +NIQ+++KR P S L +G + L + K ++C+CPKIKLN
Sbjct: 687 TEKFSIERQNEIYKYEINIQTIFKRNPMSGTTSSLLGRGNMMLLVPRKSIECQCPKIKLN 746
Query: 153 KPYLILGKEKEGNQPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
K YLILG++ E P L + S+V+EWKDE RM++FQRR
Sbjct: 747 KSYLILGRDSEA-APGYLAIGPSSVVLEWKDEWSLRMKRFQRR 788
>UNIPROTKB|F1PSP7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:NCHTCDA EMBL:AAEX03003649
EMBL:AAEX03003650 EMBL:AAEX03003651 EMBL:AAEX03003652
EMBL:AAEX03003653 Ensembl:ENSCAFT00000027581 Uniprot:F1PSP7
Length = 603
Score = 203 (76.5 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 37/89 (41%), Positives = 61/89 (68%)
Query: 107 KEWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQ 166
++W +FT+NI S YK+ S++++G LWI ++D+ CKCPKIK K YL+LG ++
Sbjct: 508 EDWWKFTVNIIS-YKQGT-SRIRRGDQSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPD 565
Query: 167 PSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
SG+ + S+V++W+D R+R+FQ+R
Sbjct: 566 QSGIVADKSSLVIQWRDTWARRLRKFQQR 594
>ZFIN|ZDB-GENE-050310-2 [details] [associations]
symbol:ntn2 "netrin 2" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-2 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 GeneTree:ENSGT00700000104042
OMA:RAHPASY EMBL:FP102170 EMBL:CU929347 EMBL:AY928518
IPI:IPI00628796 RefSeq:NP_001032492.1 UniGene:Dr.153063
Ensembl:ENSDART00000112318 GeneID:641469 KEGG:dre:641469 CTD:641469
NextBio:20901575 Uniprot:Q32SK9
Length = 600
Score = 199 (75.1 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 37/90 (41%), Positives = 58/90 (64%)
Query: 108 EWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQP 167
+W +F++++ S+YK D LK+G LW+H KDL CKCP+I + K +LILG + P
Sbjct: 503 DWAKFSVSLMSVYKSRGDP-LKRGDHMLWVHMKDLACKCPRIHMGKRFLILGSTEGTANP 561
Query: 168 S--GLTMNAKSIVVEWKDELHDRMRQFQRR 195
GL + S+V++W+D R+R+FQR+
Sbjct: 562 ERPGLQADKNSLVIQWRDIWTRRLRKFQRK 591
>RGD|619809 [details] [associations]
symbol:Ntn1 "netrin 1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=ISO] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007411 "axon guidance" evidence=ISO;NAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016337 "cell-cell adhesion" evidence=ISO]
[GO:0030334 "regulation of cell migration" evidence=ISO]
[GO:0030517 "negative regulation of axon extension" evidence=ISO]
[GO:0030879 "mammary gland development" evidence=ISO] [GO:0033564
"anterior/posterior axon guidance" evidence=ISO] [GO:0040023
"establishment of nucleus localization" evidence=ISO] [GO:0042472
"inner ear morphogenesis" evidence=ISO] [GO:0045773 "positive
regulation of axon extension" evidence=ISO] [GO:0060603 "mammary
gland duct morphogenesis" evidence=ISO] InterPro:IPR001134
PROSITE:PS50189 RGD:619809 GO:GO:0005737 GO:GO:0006915
GO:GO:0007411 GO:GO:0001764 GO:GO:0008284 GO:GO:0005578
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 HSSP:P02468 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOVERGEN:HBG006464 CTD:9423 eggNOG:NOG244580 HOGENOM:HOG000286017
OrthoDB:EOG4H19V9 EMBL:AY028417 IPI:IPI00205229 UniGene:Rn.41052
ProteinModelPortal:Q924Z9 IntAct:Q924Z9 STRING:Q924Z9 PRIDE:Q924Z9
UCSC:RGD:619809 InParanoid:Q924Z9 NextBio:618675
ArrayExpress:Q924Z9 Genevestigator:Q924Z9 Uniprot:Q924Z9
Length = 604
Score = 194 (73.4 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 35/88 (39%), Positives = 58/88 (65%)
Query: 108 EWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQP 167
+W +FT+NI S+YK+ S++++G LWI ++D+ KCPKIK K YL+LG ++
Sbjct: 509 DWWKFTVNIISVYKQGT-SRIRRGDQSLWIRSRDIAXKCPKIKPLKKYLLLGNAEDSPDQ 567
Query: 168 SGLTMNAKSIVVEWKDELHDRMRQFQRR 195
SG+ + +V++W+D R R+FQ+R
Sbjct: 568 SGIVADKSXLVIQWRDTWARRXRKFQQR 595
>WB|WBGene00006746 [details] [associations]
symbol:unc-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0008078 "mesodermal cell migration" evidence=IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0030334
"regulation of cell migration" evidence=IGI;IMP] [GO:0035262 "gonad
morphogenesis" evidence=IGI;IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] [GO:0005102
"receptor binding" evidence=ISS] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] Reactome:REACT_86739 InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0030424 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045
GO:GO:0030163 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759
GO:GO:0035262 SMART:SM00643 GO:GO:0033563 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 KO:K06843
eggNOG:NOG244580 HOGENOM:HOG000286017 CTD:180961
GeneTree:ENSGT00700000104042 EMBL:M80241 EMBL:FO080932 PIR:JH0799
RefSeq:NP_509165.1 ProteinModelPortal:P34710 SMR:P34710
DIP:DIP-24693N MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 186 (70.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 27/87 (31%), Positives = 61/87 (70%)
Query: 109 WVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQPS 168
W ++ + ++S++KR ++ +++G LWI + + CKCPK+++ + YL+LGK ++
Sbjct: 513 WAKYKIVVESVFKRGTEN-MQRGETSLWISPQGVICKCPKLRVGRRYLLLGKNDSDHERD 571
Query: 169 GLTMNAKSIVVEWKDELHDRMRQFQRR 195
GL +N ++++VEW+D++ D++ +F ++
Sbjct: 572 GLMVNPQTVLVEWEDDIMDKVLRFSKK 598
>UNIPROTKB|P34710 [details] [associations]
symbol:unc-6 "Netrin unc-6" species:6239 "Caenorhabditis
elegans" [GO:0005576 "extracellular region" evidence=TAS]
Reactome:REACT_86739 InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005737 GO:GO:0030424 GO:GO:0005102 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045 GO:GO:0030163
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759 GO:GO:0035262
SMART:SM00643 GO:GO:0033563 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 CTD:180961 GeneTree:ENSGT00700000104042
EMBL:M80241 EMBL:FO080932 PIR:JH0799 RefSeq:NP_509165.1
ProteinModelPortal:P34710 SMR:P34710 DIP:DIP-24693N
MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 186 (70.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 27/87 (31%), Positives = 61/87 (70%)
Query: 109 WVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQPS 168
W ++ + ++S++KR ++ +++G LWI + + CKCPK+++ + YL+LGK ++
Sbjct: 513 WAKYKIVVESVFKRGTEN-MQRGETSLWISPQGVICKCPKLRVGRRYLLLGKNDSDHERD 571
Query: 169 GLTMNAKSIVVEWKDELHDRMRQFQRR 195
GL +N ++++VEW+D++ D++ +F ++
Sbjct: 572 GLMVNPQTVLVEWEDDIMDKVLRFSKK 598
>FB|FBgn0015773 [details] [associations]
symbol:NetA "Netrin-A" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0007411
"axon guidance" evidence=IGI;ISS;NAS] [GO:0070983 "dendrite
guidance" evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 eggNOG:NOG244580
GeneTree:ENSGT00700000104042 EMBL:U60316 EMBL:U63736 EMBL:AY089580
RefSeq:NP_001245667.1 RefSeq:NP_511154.3 UniGene:Dm.2915
ProteinModelPortal:Q24567 SMR:Q24567 IntAct:Q24567 MINT:MINT-285237
STRING:Q24567 EnsemblMetazoa:FBtr0073942 GeneID:32398
KEGG:dme:Dmel_CG18657 CTD:32398 FlyBase:FBgn0015773
InParanoid:Q24567 OMA:AIMAKVI OrthoDB:EOG470RZN PhylomeDB:Q24567
GenomeRNAi:32398 NextBio:778263 Bgee:Q24567 GermOnline:CG18657
GO:GO:2000289 Uniprot:Q24567
Length = 726
Score = 187 (70.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 41/105 (39%), Positives = 65/105 (61%)
Query: 108 EWVRFTMNIQSMYKRA--------------PDSKLKKGAVYLWIHNKDLQCKCPKIKLNK 153
E RF + IQ+++KR+ P++ LK+G + I KDL+C+CP+I++N+
Sbjct: 621 EMERFDLQIQAVFKRSRPGESSGAGNVYGMPNTTLKRGPMTWIIPTKDLECRCPRIRVNR 680
Query: 154 PYLILGKEKEGNQPSGLTMNAKSIVVEWKDELHDRMRQFQRRGCT 198
YLILG++ E P L + SIV+EWK++ + RM++FQRR T
Sbjct: 681 SYLILGRDSEA-PPGYLGIGPHSIVIEWKEDWYRRMKRFQRRART 724
>UNIPROTKB|E2R3Q6 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005794 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
CTD:4917 KO:K06844 OMA:TASPLCW GeneTree:ENSGT00700000104042
EMBL:AAEX03004613 RefSeq:XP_537003.3 Ensembl:ENSCAFT00000030773
GeneID:479878 KEGG:cfa:479878 NextBio:20854992 Uniprot:E2R3Q6
Length = 577
Score = 136 (52.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 27/90 (30%), Positives = 51/90 (56%)
Query: 109 WVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGK---EKEGN 165
W RF + + +++ R+ + + ++G+ LW+ +D C CP++ + YL+LG G
Sbjct: 480 WTRFPVAVLAVF-RSGEERARRGSSALWVPARDAACGCPRLLPGRRYLLLGGGPGTAVGG 538
Query: 166 QPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
+ GL+ S+V+ W+D R+R+ QRR
Sbjct: 539 RGPGLSAARGSLVLPWRDAWTRRLRRLQRR 568
>UNIPROTKB|G3N0E7 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 CTD:4917 KO:K06844 OMA:TASPLCW
GeneTree:ENSGT00700000104042 EMBL:DAAA02057314
RefSeq:NP_001193834.1 UniGene:Bt.111865 Ensembl:ENSBTAT00000063051
GeneID:787961 KEGG:bta:787961 NextBio:20928798 Uniprot:G3N0E7
Length = 580
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/93 (29%), Positives = 51/93 (54%)
Query: 109 WVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEK------ 162
W RF + + +++ R+ + + ++G+ LW+ +D C CP++ + YL+LG
Sbjct: 480 WTRFPVAVLAVF-RSGEERARRGSSALWVPARDAACGCPRLLPGRRYLLLGGGPGAAVGG 538
Query: 163 EGNQPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
G + GL+ S+V+ W+D R+R+ QRR
Sbjct: 539 PGGRGPGLSAARGSLVLPWRDAWTRRLRRLQRR 571
>UNIPROTKB|F1SUI0 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
GeneTree:ENSGT00700000104042 OMA:RAHPASY EMBL:FP102361
RefSeq:XP_003354720.1 Ensembl:ENSSSCT00000008826 GeneID:100622906
KEGG:ssc:100622906 Uniprot:F1SUI0
Length = 580
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/93 (29%), Positives = 51/93 (54%)
Query: 109 WVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEK------ 162
W RF + + +++ R+ + + ++G+ LW+ +D C CP++ + YL+LG
Sbjct: 480 WTRFPVAVLAVF-RSGEERARRGSSALWVPARDAACGCPRLLPGRHYLLLGGGPGAAVGG 538
Query: 163 EGNQPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
G + GL+ S+V+ W+D R+R+ QRR
Sbjct: 539 PGGRGPGLSAARGSLVLPWRDAWTRRLRRLQRR 571
>UNIPROTKB|G3V6X3 [details] [associations]
symbol:Ntn3 "Netrin 2-like (Chicken)" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
RGD:619811 GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 EMBL:CH473948
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
OMA:TASPLCW GeneTree:ENSGT00700000104042 RefSeq:NP_446184.1
UniGene:Rn.95949 Ensembl:ENSRNOT00000009735 GeneID:114524
KEGG:rno:114524 NextBio:618679 Uniprot:G3V6X3
Length = 580
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 28/94 (29%), Positives = 51/94 (54%)
Query: 109 WVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGK-------E 161
W RF + + +++ R+ + + ++G+ LW+ D C CP+++ + YL+LG
Sbjct: 480 WTRFPVAVLAVF-RSGEERARRGSSALWVPTLDAACGCPRLQPGRRYLLLGDGPGAAAGS 538
Query: 162 KEGNQPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
G P GL+ S+V+ W+D R+R+ QRR
Sbjct: 539 PAGRGP-GLSAARGSLVLPWRDAWTRRLRRLQRR 571
>RGD|1565197 [details] [associations]
symbol:Ntn5 "netrin 5" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 RGD:1565197 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OrthoDB:EOG402WS1
IPI:IPI00367517 Ensembl:ENSRNOT00000028524 UCSC:RGD:1565197
Uniprot:D3ZT86
Length = 448
Score = 128 (50.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 25/103 (24%), Positives = 56/103 (54%)
Query: 94 STIVGKISEKINLKEWVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNK 153
S+ + +SE + EW R +++ +++K+ +++G+ W+ DL C C +++
Sbjct: 328 SSSLSSLSEAVG-PEWWRLAVHVLAVFKQRA-WPVRRGSQEAWVPRADLSCGCLRLRPGA 385
Query: 154 PYLILGKEKEGN-QPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
YL+LG+ E + P+ L +N S+ + W+ +R+ Q++
Sbjct: 386 DYLLLGRAAENHTDPAHLILNRHSLALPWRPRWAGPLRRLQQK 428
>MGI|MGI:1341188 [details] [associations]
symbol:Ntn3 "netrin 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IDA;IPI] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA] [GO:0007409 "axonogenesis"
evidence=TAS] [GO:0007520 "myoblast fusion" evidence=ISA]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:1341188 GO:GO:0005794
GO:GO:0005576 GO:GO:0006355 GO:GO:0005578 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 Reactome:REACT_127416
GO:GO:0007409 PROSITE:PS01186 GO:GO:0007520 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 CTD:4917 KO:K06844
OMA:TASPLCW EMBL:AF152418 EMBL:AK031199 EMBL:AF149094 EMBL:AF128866
IPI:IPI00471207 RefSeq:NP_035077.1 UniGene:Mm.259542
ProteinModelPortal:Q9R1A3 SMR:Q9R1A3 STRING:Q9R1A3
PhosphoSite:Q9R1A3 PRIDE:Q9R1A3 Ensembl:ENSMUST00000024931
GeneID:18209 KEGG:mmu:18209 GeneTree:ENSGT00700000104042
InParanoid:Q9R1A3 NextBio:293594 Bgee:Q9R1A3 Genevestigator:Q9R1A3
GermOnline:ENSMUSG00000036473 Uniprot:Q9R1A3
Length = 580
Score = 125 (49.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 26/93 (27%), Positives = 49/93 (52%)
Query: 109 WVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILG------KEK 162
W RF + + +++ R+ + + ++G+ LW+ D C CP++ + YL+LG
Sbjct: 480 WTRFPVAVLAVF-RSGEERARRGSSALWVPTLDAACGCPRLLPGRRYLLLGGGPGAAAGS 538
Query: 163 EGNQPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
+ GL+ S+V+ W+D R+R+ QRR
Sbjct: 539 TAGRGQGLSAARGSLVLPWRDAWTRRLRRLQRR 571
>UNIPROTKB|O00634 [details] [associations]
symbol:NTN3 "Netrin-3" species:9606 "Homo sapiens"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0042692 "muscle cell
differentiation" evidence=TAS] [GO:0051149 "positive regulation of
muscle cell differentiation" evidence=TAS] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005794 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0005578 PROSITE:PS00022 GO:GO:0042692 GO:GO:0051149
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
eggNOG:NOG244580 HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 EMBL:U86759
EMBL:U86758 IPI:IPI00006193 RefSeq:NP_006172.1 UniGene:Hs.158336
ProteinModelPortal:O00634 SMR:O00634 STRING:O00634 PaxDb:O00634
PRIDE:O00634 Ensembl:ENST00000293973 GeneID:4917 KEGG:hsa:4917
UCSC:uc002cqj.3 CTD:4917 GeneCards:GC16P002521 HGNC:HGNC:8030
MIM:602349 neXtProt:NX_O00634 PharmGKB:PA164724231
InParanoid:O00634 KO:K06844 OMA:TASPLCW PhylomeDB:O00634
GenomeRNAi:4917 NextBio:18935 Bgee:O00634 CleanEx:HS_NTN3
Genevestigator:O00634 GermOnline:ENSG00000162068 Uniprot:O00634
Length = 580
Score = 124 (48.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 109 WVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEK------ 162
W RF + + +++ R+ + + ++G+ LW+ D C CP++ + YL+LG
Sbjct: 480 WTRFPVAVLAVF-RSGEERARRGSSALWVPAGDAACGCPRLLPGRRYLLLGGGPGAAAGG 538
Query: 163 EGNQPSGLTMNAKSIVVEWKDELHDRMRQFQRR 195
G + GL S+V+ W+D R+R+ QRR
Sbjct: 539 AGGRGPGLIAARGSLVLPWRDAWTRRLRRLQRR 571
>UNIPROTKB|G5E6L9 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 EMBL:DAAA02047467
Ensembl:ENSBTAT00000063836 Uniprot:G5E6L9
Length = 446
Score = 115 (45.5 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 20/86 (23%), Positives = 44/86 (51%)
Query: 109 WVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQPS 168
W R + + ++YK+ +++G+ W+ DL C C +++ YL+LG+ G P+
Sbjct: 341 WQRLAVRVLAVYKQGAQP-VRRGSQAAWVPRADLTCGCLRLRPASHYLLLGRTAGGPDPT 399
Query: 169 GLTMNAKSIVVEWKDELHDRMRQFQR 194
L ++ + + W+ +R+ Q+
Sbjct: 400 RLVLDRHGLALPWRPRWARPLRRLQQ 425
>UNIPROTKB|F1MF28 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 CTD:126147 OMA:GGPFLLT
EMBL:DAAA02047467 IPI:IPI01001483 RefSeq:NP_001193801.1
UniGene:Bt.48155 Ensembl:ENSBTAT00000061223 GeneID:785970
KEGG:bta:785970 NextBio:20927619 Uniprot:F1MF28
Length = 489
Score = 115 (45.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 20/86 (23%), Positives = 44/86 (51%)
Query: 109 WVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQPS 168
W R + + ++YK+ +++G+ W+ DL C C +++ YL+LG+ G P+
Sbjct: 384 WQRLAVRVLAVYKQGAQP-VRRGSQAAWVPRADLTCGCLRLRPASHYLLLGRTAGGPDPT 442
Query: 169 GLTMNAKSIVVEWKDELHDRMRQFQR 194
L ++ + + W+ +R+ Q+
Sbjct: 443 RLVLDRHGLALPWRPRWARPLRRLQQ 468
>UNIPROTKB|E2RRE4 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:AAEX03000816 Ensembl:ENSCAFT00000006331 Uniprot:E2RRE4
Length = 489
Score = 108 (43.1 bits), Expect = 0.00076, P = 0.00076
Identities = 20/85 (23%), Positives = 42/85 (49%)
Query: 109 WVRFTMNIQSMYKRAPDSKLKKGAVYLWIHNKDLQCKCPKIKLNKPYLILGKEKEGNQPS 168
W R + + ++YK+ ++ G+ W+ DL C C +++ + YL+LG G P+
Sbjct: 384 WQRLAVRVLAVYKQRA-RPVRHGSQDAWVPRADLACGCLRLQPDTDYLLLGSAAGGPDPA 442
Query: 169 GLTMNAKSIVVEWKDELHDRMRQFQ 193
L ++ + + W+ +R+ Q
Sbjct: 443 RLVLDRHGLALPWRPRWARPLRRLQ 467
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 198 175 0.00078 109 3 11 22 0.40 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 598 (64 KB)
Total size of DFA: 176 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.41u 0.12s 16.53t Elapsed: 00:00:03
Total cpu time: 16.42u 0.12s 16.54t Elapsed: 00:00:03
Start: Thu Aug 15 13:26:15 2013 End: Thu Aug 15 13:26:18 2013