BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12862
(98 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345497300|ref|XP_001601722.2| PREDICTED: netrin-1-like [Nasonia vitripennis]
Length = 712
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 65/75 (86%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD + CNCN HARKCRFNM+LYKLSGR SGGVCLQCRHFTAGRHCHYC EGYY
Sbjct: 419 RATARDANECKVCNCNQHARKCRFNMDLYKLSGRVSGGVCLQCRHFTAGRHCHYCMEGYY 478
Query: 83 RDPSRPITHRKACKK 97
RDP+RPITHRKACK
Sbjct: 479 RDPTRPITHRKACKP 493
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA KC S G + +CRH T GR C CK Y+ P T R A
Sbjct: 375 CKCNGHAAKC---------SPDKDGQLACECRHNTFGRDCEKCKPFYFDRPWARATARDA 425
>gi|383863533|ref|XP_003707235.1| PREDICTED: netrin-1-like [Megachile rotundata]
Length = 637
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 66/75 (88%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD + CNCN HARKCRFNMELYKLSGR SGGVCLQCRHFTAGRHCHYC+EGYY
Sbjct: 341 RATARDANECKVCNCNLHARKCRFNMELYKLSGRVSGGVCLQCRHFTAGRHCHYCREGYY 400
Query: 83 RDPSRPITHRKACKK 97
RDP+RPITHRKACK
Sbjct: 401 RDPARPITHRKACKP 415
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + G+ G V +CRH TAGR C C+ ++ P T R A
Sbjct: 297 CKCNGHAARC--------IPGKD-GEVACECRHNTAGRDCERCRPFHFDRPWARATARDA 347
>gi|380026860|ref|XP_003697158.1| PREDICTED: netrin-A-like [Apis florea]
Length = 673
Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 65/75 (86%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD + CNCN HARKCRFNMELYKLSGR SGGVCLQCRHFTAGRHCHYC+EGYY
Sbjct: 367 RATARDANECKECNCNLHARKCRFNMELYKLSGRVSGGVCLQCRHFTAGRHCHYCREGYY 426
Query: 83 RDPSRPITHRKACKK 97
RDP+RPI HRKACK
Sbjct: 427 RDPARPIQHRKACKP 441
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + G+ G V +CRH TAGR C C+ ++ P T R A
Sbjct: 323 CKCNGHAARC--------IQGKD-GEVACECRHNTAGRDCERCRPFHFDRPWARATARDA 373
>gi|340727831|ref|XP_003402238.1| PREDICTED: netrin-B-like [Bombus terrestris]
Length = 678
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 65/75 (86%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD + CNCN HARKCRFNMELYKLSGR SGGVCLQCRHFTAGRHCHYC+EGYY
Sbjct: 382 RATARDANECKECNCNLHARKCRFNMELYKLSGRVSGGVCLQCRHFTAGRHCHYCREGYY 441
Query: 83 RDPSRPITHRKACKK 97
RDP+RPI HRKACK
Sbjct: 442 RDPARPIQHRKACKP 456
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + G+ G V +CRH TAGR C C+ ++ P T R A
Sbjct: 338 CKCNGHAARC--------IQGKD-GEVACECRHNTAGRDCERCRPFHFDRPWARATARDA 388
>gi|350399310|ref|XP_003485486.1| PREDICTED: LOW QUALITY PROTEIN: netrin-B-like [Bombus impatiens]
Length = 652
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 65/75 (86%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD + CNCN HARKCRFNMELYKLSGR SGGVCLQCRHFTAGRHCHYC+EGYY
Sbjct: 356 RATARDANECKECNCNLHARKCRFNMELYKLSGRVSGGVCLQCRHFTAGRHCHYCREGYY 415
Query: 83 RDPSRPITHRKACKK 97
RDP+RPI HRKACK
Sbjct: 416 RDPARPIQHRKACKP 430
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + G+ G V +CRH TAGR C C+ ++ P T R A
Sbjct: 312 CKCNGHAARC--------IQGKD-GEVACECRHNTAGRDCERCRPFHFDRPWARATARDA 362
>gi|328776291|ref|XP_001122402.2| PREDICTED: netrin-1-like [Apis mellifera]
Length = 224
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/65 (89%), Positives = 61/65 (93%)
Query: 32 FQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
F+ CNCN HARKCRFNMELYKLSGR SGGVCLQCRHFTAGRHCHYC+EGYYRDP+RPI H
Sbjct: 16 FRECNCNLHARKCRFNMELYKLSGRVSGGVCLQCRHFTAGRHCHYCREGYYRDPARPIQH 75
Query: 92 RKACK 96
RKACK
Sbjct: 76 RKACK 80
>gi|242021734|ref|XP_002431298.1| Netrin-1 precursor, putative [Pediculus humanus corporis]
gi|212516566|gb|EEB18560.1| Netrin-1 precursor, putative [Pediculus humanus corporis]
Length = 732
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 64/74 (86%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R + RD + CNCN H++KCRFNMELYKLSGR SGGVCL+CRHFTAGR CHYCKEGYY
Sbjct: 455 RATERDANECKACNCNQHSKKCRFNMELYKLSGRVSGGVCLKCRHFTAGRFCHYCKEGYY 514
Query: 83 RDPSRPITHRKACK 96
RDP++PITHRKACK
Sbjct: 515 RDPTKPITHRKACK 528
>gi|328696441|ref|XP_003240023.1| PREDICTED: netrin-B-like [Acyrthosiphon pisum]
Length = 548
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 65/74 (87%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R + RD + CNCN HA++CRF+MELYKLSGR SGGVCL+CRHFTAGR+CHYCKEGYY
Sbjct: 415 RATVRDPNECKPCNCNEHAKRCRFDMELYKLSGRVSGGVCLKCRHFTAGRYCHYCKEGYY 474
Query: 83 RDPSRPITHRKACK 96
RDP++PITHRKACK
Sbjct: 475 RDPTKPITHRKACK 488
>gi|307200587|gb|EFN80728.1| Netrin-1 [Harpegnathos saltator]
Length = 252
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/62 (93%), Positives = 59/62 (95%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HARKCRFNMELYKLSGR SGGVCLQCRH TAGRHCHYCKEGYYRDP+RPITHRKA
Sbjct: 1 CNCNLHARKCRFNMELYKLSGRVSGGVCLQCRHSTAGRHCHYCKEGYYRDPARPITHRKA 60
Query: 95 CK 96
CK
Sbjct: 61 CK 62
>gi|326930635|ref|XP_003211449.1| PREDICTED: coiled-coil domain-containing protein 42A-like
[Meleagris gallopavo]
Length = 483
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/64 (84%), Positives = 58/64 (90%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+YRD S+PI+HRKA
Sbjct: 313 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKA 372
Query: 95 CKKV 98
CK V
Sbjct: 373 CKAV 376
>gi|270015725|gb|EFA12173.1| netrin [Tribolium castaneum]
Length = 742
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 61/67 (91%)
Query: 30 IFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPI 89
I +TC CN HAR+CRFNMELYKLSGR SGGVCL+CRH+TAGRHCHYC+EG+YRDP++ I
Sbjct: 459 INSETCECNQHARRCRFNMELYKLSGRVSGGVCLKCRHYTAGRHCHYCREGFYRDPTKQI 518
Query: 90 THRKACK 96
THRKACK
Sbjct: 519 THRKACK 525
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C ++GR G + +C+H TAG+ C CK ++ P T R A
Sbjct: 347 CKCNGHASRC--------ITGRD-GQLACECKHNTAGKDCERCKPFHFDRPWGRATARDA 397
>gi|321464154|gb|EFX75164.1| hypothetical protein DAPPUDRAFT_56315 [Daphnia pulex]
Length = 603
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 66/75 (88%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R +++D + CNCN HAR+CRFNMEL+KLSGR SGGVCL+CRH TAGR+CHYCKEGYY
Sbjct: 335 RATAKDANECKACNCNLHARRCRFNMELFKLSGRISGGVCLKCRHNTAGRYCHYCKEGYY 394
Query: 83 RDPSRPITHRKACKK 97
RDP++PITHRKACK+
Sbjct: 395 RDPAKPITHRKACKE 409
>gi|189241844|ref|XP_969939.2| PREDICTED: similar to netrin [Tribolium castaneum]
Length = 653
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 64/74 (86%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD + C CN HAR+CRFNMELYKLSGR SGGVCL+CRH+TAGRHCHYC+EG+Y
Sbjct: 391 RATARDANECKACECNQHARRCRFNMELYKLSGRVSGGVCLKCRHYTAGRHCHYCREGFY 450
Query: 83 RDPSRPITHRKACK 96
RDP++ ITHRKACK
Sbjct: 451 RDPTKQITHRKACK 464
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C ++GR G + +C+H TAG+ C CK ++ P T R A
Sbjct: 347 CKCNGHASRC--------ITGRD-GQLACECKHNTAGKDCERCKPFHFDRPWGRATARDA 397
>gi|426384118|ref|XP_004058622.1| PREDICTED: uncharacterized protein LOC101129154 [Gorilla gorilla
gorilla]
Length = 906
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 62/75 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 133 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 192
Query: 83 RDPSRPITHRKACKK 97
RD +PITHRKACK+
Sbjct: 193 RDMGKPITHRKACKE 207
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 72 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRC 122
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 123 KPFHYDRPWQRATAREA 139
>gi|6966928|emb|CAB72422.1| amphinetrin [Branchiostoma floridae]
Length = 555
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 63/76 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD CNCN HAR+CRFNMELYKLSGR GGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 335 RATARDANECIACNCNLHARRCRFNMELYKLSGRKGGGVCLNCRHNTAGRHCHYCKEGFY 394
Query: 83 RDPSRPITHRKACKKV 98
RD S+PITHRKACK++
Sbjct: 395 RDESKPITHRKACKEI 410
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 17/78 (21%)
Query: 25 SSRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHY 76
+SRD ++ C CN HA KC + E G + C+H TAG C +
Sbjct: 273 ASRDSYYYAVSDFAVGGRCKCNGHASKCVHDRE---------GRLACDCKHNTAGDECDH 323
Query: 77 CKEGYYRDPSRPITHRKA 94
CK +Y P + T R A
Sbjct: 324 CKPFHYDRPWQRATARDA 341
>gi|113120220|gb|ABI30254.1| netrin [Artemia franciscana]
Length = 138
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 65/73 (89%)
Query: 25 SSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
++R+ + CNCN HARKCRFNMELYKLSGR SGGVCL+CRH TAGR+CHYCKEGYYRD
Sbjct: 2 TAREANECKVCNCNLHARKCRFNMELYKLSGRVSGGVCLKCRHNTAGRYCHYCKEGYYRD 61
Query: 85 PSRPITHRKACKK 97
PS+PITH+KACK+
Sbjct: 62 PSKPITHKKACKE 74
>gi|241057109|ref|XP_002407809.1| netrin, putative [Ixodes scapularis]
gi|215492300|gb|EEC01941.1| netrin, putative [Ixodes scapularis]
Length = 148
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/66 (83%), Positives = 58/66 (87%)
Query: 31 FFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT 90
F CNCN HAR+CRFNMEL+KLSGR SGGVCL CRH TAGRHCHYCKEGYYRD S+PIT
Sbjct: 83 FLPACNCNLHARRCRFNMELFKLSGRQSGGVCLNCRHNTAGRHCHYCKEGYYRDHSKPIT 142
Query: 91 HRKACK 96
HRKACK
Sbjct: 143 HRKACK 148
>gi|327264812|ref|XP_003217205.1| PREDICTED: netrin-1-like [Anolis carolinensis]
Length = 711
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 436 RATAREANQCLACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 495
Query: 83 RDPSRPITHRKACK 96
RD ++PITHRKACK
Sbjct: 496 RDMTKPITHRKACK 509
>gi|323721338|gb|ADY05326.1| netrin [Cupiennius salei]
Length = 380
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 59/63 (93%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
CNCN HAR+CRFNMELYKLSGR+SGGVCL+CRH TAGRHCHYCKEGYYRD ++PITHRK
Sbjct: 294 ACNCNFHARRCRFNMELYKLSGRTSGGVCLKCRHNTAGRHCHYCKEGYYRDKTKPITHRK 353
Query: 94 ACK 96
ACK
Sbjct: 354 ACK 356
>gi|326929419|ref|XP_003210862.1| PREDICTED: netrin-3-like [Meleagris gallopavo]
Length = 489
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/68 (79%), Positives = 58/68 (85%)
Query: 29 RIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
R+ F CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+YRD S+
Sbjct: 240 RVVFSPCNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKS 299
Query: 89 ITHRKACK 96
IT RKACK
Sbjct: 300 ITDRKACK 307
>gi|24158431|ref|NP_571104.1| netrin 1a precursor [Danio rerio]
gi|2327065|gb|AAC60252.1| netrin-1a [Danio rerio]
gi|165993482|emb|CAP71961.1| ntn1a [Danio rerio]
Length = 603
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 328 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 387
Query: 83 RDPSRPITHRKACK 96
RD S+PI+HRKACK
Sbjct: 388 RDMSKPISHRKACK 401
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC +C+H TAG C C
Sbjct: 267 ARDSYFYAVSDLQVGGRCKCNGHASRC--------VKDRDGNLVC-ECKHNTAGPECDRC 317
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 318 KPFHYDRPWQRATAREA 334
>gi|89130539|gb|AAI14260.1| Ntn1a protein [Danio rerio]
Length = 446
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 328 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 387
Query: 83 RDPSRPITHRKACK 96
RD S+PI+HRKACK
Sbjct: 388 RDMSKPISHRKACK 401
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC +C+H TAG C C
Sbjct: 267 ARDSYFYAVSDLQVGGRCKCNGHASRC--------VKDRDGNLVC-ECKHNTAGPECDRC 317
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 318 KPFHYDRPWQRATAREA 334
>gi|410917131|ref|XP_003972040.1| PREDICTED: netrin-1-like [Takifugu rubripes]
Length = 606
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 331 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 390
Query: 83 RDPSRPITHRKACK 96
RD S+PI+HRKACK
Sbjct: 391 RDLSKPISHRKACK 404
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + R G VC +C+H TAG C CK +Y P + T R+A
Sbjct: 287 CKCNGHASRC--------VKDRDGGLVC-ECKHNTAGPECDRCKPFHYDRPWQRATAREA 337
>gi|444712135|gb|ELW53066.1| Netrin-1 [Tupaia chinensis]
Length = 299
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/64 (84%), Positives = 57/64 (89%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYYRD +PITHR
Sbjct: 33 KACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHR 92
Query: 93 KACK 96
KACK
Sbjct: 93 KACK 96
>gi|332848668|ref|XP_511846.3| PREDICTED: netrin-1 [Pan troglodytes]
Length = 725
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 388
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 389 RDMGKPITHRKACK 402
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 268 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHHTAGPECDRC 318
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 319 KPFHYDRPWQRATAREA 335
>gi|47213869|emb|CAF94019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 640
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYYRD S+PI+HRK
Sbjct: 402 SCNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKPISHRK 461
Query: 94 ACK 96
ACK
Sbjct: 462 ACK 464
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + R VC +C+H TAG C CK +Y P + T R+A
Sbjct: 286 CKCNGHASRC--------VKDRDGSLVC-ECKHNTAGPECDRCKPFHYDRPWQRATAREA 336
>gi|440895598|gb|ELR47748.1| Netrin-1, partial [Bos grunniens mutus]
Length = 549
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 57/67 (85%)
Query: 30 IFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPI 89
+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYYRD +PI
Sbjct: 281 LPLTACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLGKPI 340
Query: 90 THRKACK 96
THRKACK
Sbjct: 341 THRKACK 347
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 212 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRC 262
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 263 KPFHYDRPWQRATAREA 279
>gi|403275386|ref|XP_003929430.1| PREDICTED: netrin-1 [Saimiri boliviensis boliviensis]
Length = 682
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 407 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 466
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 467 RDMGKPITHRKACK 480
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 346 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRC 396
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 397 KPFHYDRPWQRATAREA 413
>gi|431894057|gb|ELK03863.1| Netrin-1 [Pteropus alecto]
Length = 341
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 56/63 (88%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYYRD +PITHRK
Sbjct: 77 ACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRK 136
Query: 94 ACK 96
ACK
Sbjct: 137 ACK 139
>gi|348520973|ref|XP_003448001.1| PREDICTED: netrin-1-like [Oreochromis niloticus]
Length = 606
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 331 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 390
Query: 83 RDPSRPITHRKACK 96
RD S+PI+HRKACK
Sbjct: 391 RDLSKPISHRKACK 404
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC +C+H TAG C C
Sbjct: 270 ARDSYFYSVSDLQVGGRCKCNGHASRC--------VKDRDGNLVC-ECKHNTAGPECDRC 320
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 321 KPFHYDRPWQRATAREA 337
>gi|4098197|gb|AAD09221.1| netrin-1 [Homo sapiens]
Length = 604
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 388
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 389 RDMGKPITHRKACK 402
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R+ VC CRH TAG C C
Sbjct: 268 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRTDSLVC-DCRHNTAGPECDRC 318
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 319 KPFHYDRPWQRATAREA 335
>gi|148613884|ref|NP_004813.2| netrin-1 precursor [Homo sapiens]
gi|229462906|sp|O95631.2|NET1_HUMAN RecName: Full=Netrin-1; AltName: Full=Epididymis tissue protein Li
131P; Flags: Precursor
gi|317040170|gb|ADU87650.1| epididymis secretory sperm binding protein Li 131P [Homo sapiens]
gi|410287090|gb|JAA22145.1| netrin 1 [Pan troglodytes]
Length = 604
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 388
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 389 RDMGKPITHRKACK 402
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 268 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRC 318
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 319 KPFHYDRPWQRATAREA 335
>gi|345800259|ref|XP_850304.2| PREDICTED: LOW QUALITY PROTEIN: netrin-1 [Canis lupus familiaris]
Length = 604
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 388
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 389 RDMGKPITHRKACK 402
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 268 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRC 318
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 319 KPFHYDRPWQRATAREA 335
>gi|345326490|ref|XP_003431050.1| PREDICTED: netrin-1-like [Ornithorhynchus anatinus]
Length = 603
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYC+EGYY
Sbjct: 349 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCREGYY 408
Query: 83 RDPSRPITHRKACK 96
RD S+PITHRKACK
Sbjct: 409 RDLSKPITHRKACK 422
>gi|397494596|ref|XP_003818160.1| PREDICTED: netrin-1, partial [Pan paniscus]
Length = 527
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 252 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 311
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 312 RDMGKPITHRKACK 325
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 191 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRC 241
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 242 KPFHYDRPWQRATAREA 258
>gi|300796659|ref|NP_001179495.1| netrin-1 precursor [Bos taurus]
gi|296476680|tpg|DAA18795.1| TPA: netrin 1-like [Bos taurus]
Length = 603
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 328 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 387
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 388 RDLGKPITHRKACK 401
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 267 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRC 317
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 318 KPFHYDRPWQRATAREA 334
>gi|260821571|ref|XP_002606106.1| hypothetical protein BRAFLDRAFT_59848 [Branchiostoma floridae]
gi|229291444|gb|EEN62116.1| hypothetical protein BRAFLDRAFT_59848 [Branchiostoma floridae]
Length = 505
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD CNCN HAR+CRFNMELYKLSGR GGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 275 RATARDANECIACNCNLHARRCRFNMELYKLSGRKGGGVCLNCRHNTAGRHCHYCKEGFY 334
Query: 83 RDPSRPITHRKACK 96
RD S+PITHRKACK
Sbjct: 335 RDESKPITHRKACK 348
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 17/78 (21%)
Query: 25 SSRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHY 76
+SRD ++ C CN HA KC + E G + C+H TAG C +
Sbjct: 213 ASRDSYYYAVSDFAVGGRCKCNGHASKCVHDRE---------GRLACDCKHNTAGDECDH 263
Query: 77 CKEGYYRDPSRPITHRKA 94
CK +Y P + T R A
Sbjct: 264 CKPFHYDRPWQRATARDA 281
>gi|395836742|ref|XP_003791309.1| PREDICTED: LOW QUALITY PROTEIN: netrin-1 [Otolemur garnettii]
Length = 944
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 669 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 728
Query: 83 RDPSRPITHRKACK 96
RD +PI+HRKACK
Sbjct: 729 RDMGKPISHRKACK 742
>gi|344290208|ref|XP_003416830.1| PREDICTED: netrin-1, partial [Loxodonta africana]
Length = 558
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 388
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 389 RDMGKPITHRKACK 402
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 268 ARDSYFYAVSDLQVGGRCKCNGHAARC--------MRDRDDSLVC-DCRHNTAGPECDRC 318
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 319 KPFHYDRPWQRATAREA 335
>gi|410979929|ref|XP_003996333.1| PREDICTED: netrin-1 [Felis catus]
Length = 410
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 52/62 (83%), Positives = 55/62 (88%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HAR+CRFN ELYKLSGR SGGVCL CRH TAGRHCHYCKEGYYRD +P+THRKA
Sbjct: 87 CNCNLHARRCRFNTELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPVTHRKA 146
Query: 95 CK 96
CK
Sbjct: 147 CK 148
>gi|338711702|ref|XP_003362564.1| PREDICTED: LOW QUALITY PROTEIN: netrin-1-like [Equus caballus]
Length = 530
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 255 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 314
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 315 RDMGKPITHRKACK 328
>gi|402898752|ref|XP_003912381.1| PREDICTED: netrin-1 [Papio anubis]
Length = 808
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 533 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 592
Query: 83 RDPSRPITHRKACK 96
RD +PI+HRKACK
Sbjct: 593 RDMGKPISHRKACK 606
>gi|432845628|ref|XP_004065831.1| PREDICTED: netrin-1-like [Oryzias latipes]
Length = 602
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 327 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 386
Query: 83 RDPSRPITHRKACK 96
RD S+PI+HRKACK
Sbjct: 387 RDLSKPISHRKACK 400
>gi|296201278|ref|XP_002806842.1| PREDICTED: LOW QUALITY PROTEIN: netrin-1 [Callithrix jacchus]
Length = 441
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 295 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 354
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 355 RDMGKPITHRKACK 368
>gi|46048659|ref|NP_990750.1| netrin-1 precursor [Gallus gallus]
gi|2497605|sp|Q90922.1|NET1_CHICK RecName: Full=Netrin-1; Flags: Precursor
gi|529419|gb|AAA60369.1| netrin-1 [Gallus gallus]
Length = 606
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 63/75 (84%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 331 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 390
Query: 83 RDPSRPITHRKACKK 97
RD S+PI+HRKACK+
Sbjct: 391 RDLSKPISHRKACKE 405
>gi|297271906|ref|XP_002800331.1| PREDICTED: netrin-1 isoform 2 [Macaca mulatta]
Length = 604
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 388
Query: 83 RDPSRPITHRKACK 96
RD +PI+HRKACK
Sbjct: 389 RDMGKPISHRKACK 402
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 268 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRC 318
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 319 KPFHYDRPWQRATAREA 335
>gi|301615189|ref|XP_002937043.1| PREDICTED: netrin-1-like [Xenopus (Silurana) tropicalis]
Length = 602
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMEL+KLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 327 RATAREANECVACNCNLHARRCRFNMELFKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYY 386
Query: 83 RDPSRPITHRKACK 96
RD ++PITHRKACK
Sbjct: 387 RDMTKPITHRKACK 400
>gi|297271904|ref|XP_001113322.2| PREDICTED: netrin-1 isoform 1 [Macaca mulatta]
Length = 608
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 388
Query: 83 RDPSRPITHRKACK 96
RD +PI+HRKACK
Sbjct: 389 RDMGKPISHRKACK 402
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 268 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRC 318
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 319 KPFHYDRPWQRATAREA 335
>gi|2183225|gb|AAB60881.1| netrin-2 [Danio rerio]
Length = 244
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 88 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 147
Query: 83 RDPSRPITHRKACK 96
RD S+PI+HRKACK
Sbjct: 148 RDMSKPISHRKACK 161
>gi|355708158|gb|AES03181.1| netrin 1 [Mustela putorius furo]
Length = 168
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 2 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 61
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 62 RDMGKPITHRKACK 75
>gi|113205636|ref|NP_001038013.1| netrin-1 precursor [Sus scrofa]
gi|122135788|sp|Q2HXW4.1|NET1_PIG RecName: Full=Netrin-1; Flags: Precursor
gi|86143156|gb|ABC86678.1| netrin-1 [Sus scrofa]
Length = 600
Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGY+
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYF 388
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 389 RDLGKPITHRKACK 402
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 268 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRC 318
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 319 KPFHYDRPWQRATAREA 335
>gi|351701610|gb|EHB04529.1| Netrin-1 [Heterocephalus glaber]
Length = 606
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 331 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 390
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 391 RDMGKPITHRKACK 404
>gi|1730293|gb|AAC52971.1| Netrin-1 [Mus musculus]
Length = 603
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 328 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 387
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 388 RDMGKPITHRKACK 401
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + R VC CRH TAG C CK +Y P + T R+A
Sbjct: 284 CKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREA 334
>gi|149052990|gb|EDM04807.1| netrin 1, isoform CRA_a [Rattus norvegicus]
Length = 446
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 171 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 230
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 231 RDMGKPITHRKACK 244
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + R VC CRH TAG C CK +Y P + T R+A
Sbjct: 127 CKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREA 177
>gi|355753755|gb|EHH57720.1| Netrin-1, partial [Macaca fascicularis]
Length = 334
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 57/64 (89%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYYRD +PI+HR
Sbjct: 69 RACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPISHR 128
Query: 93 KACK 96
KACK
Sbjct: 129 KACK 132
>gi|355568240|gb|EHH24521.1| Netrin-1, partial [Macaca mulatta]
Length = 581
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 306 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 365
Query: 83 RDPSRPITHRKACK 96
RD +PI+HRKACK
Sbjct: 366 RDMGKPISHRKACK 379
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 245 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRC 295
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 296 KPFHYDRPWQRATAREA 312
>gi|4732097|gb|AAD28602.1|AF128865_1 netrin-1 precursor [Mus musculus]
Length = 604
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 388
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 389 RDMGKPITHRKACK 402
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + R VC CRH TAG C CK +Y P + T R+A
Sbjct: 285 CKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREA 335
>gi|81916437|sp|Q924Z9.1|NET1_RAT RecName: Full=Netrin-1; Flags: Precursor
gi|14148768|gb|AAK17014.1| netrin-1 [Rattus norvegicus]
Length = 604
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 388
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 389 RDMGKPITHRKACK 402
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + R VC CRH TAG C CK +Y P + T R+A
Sbjct: 285 CKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREA 335
>gi|112363094|ref|NP_032770.2| netrin-1 precursor [Mus musculus]
gi|341942243|sp|O09118.3|NET1_MOUSE RecName: Full=Netrin-1; Flags: Precursor
gi|148678499|gb|EDL10446.1| netrin 1 [Mus musculus]
gi|223461232|gb|AAI41295.1| Netrin 1 [Mus musculus]
Length = 604
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 388
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 389 RDMGKPITHRKACK 402
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + R VC CRH TAG C CK +Y P + T R+A
Sbjct: 285 CKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREA 335
>gi|410895969|ref|XP_003961472.1| PREDICTED: netrin-3-like [Takifugu rubripes]
Length = 572
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVC+ CRH TAGRHCHYCKEG+Y
Sbjct: 280 RANAREANECLPCNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFY 339
Query: 83 RDPSRPITHRKACK 96
RD +RPITHR+ACK
Sbjct: 340 RDMARPITHRRACK 353
>gi|410515422|ref|NP_446183.2| netrin-1 precursor [Rattus norvegicus]
Length = 604
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 388
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 389 RDMGKPITHRKACK 402
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + R VC CRH TAG C CK +Y P + T R+A
Sbjct: 285 CKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREA 335
>gi|47225958|emb|CAG04332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 632
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVC+ CRH TAGRHCHYCKEG+Y
Sbjct: 340 RANAREANECLPCNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFY 399
Query: 83 RDPSRPITHRKACK 96
RD +RPITHR+ACK
Sbjct: 400 RDMARPITHRRACK 413
>gi|317419282|emb|CBN81319.1| Netrin-3 [Dicentrarchus labrax]
Length = 573
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVC+ CRH TAGRHCHYCKEG+Y
Sbjct: 280 RANAREANECLPCNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFY 339
Query: 83 RDPSRPITHRKACK 96
RD +RPITHR+ACK
Sbjct: 340 RDMARPITHRRACK 353
>gi|149052991|gb|EDM04808.1| netrin 1, isoform CRA_b [Rattus norvegicus]
Length = 428
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 171 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 230
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 231 RDMGKPITHRKACK 244
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + R VC CRH TAG C CK +Y P + T R+A
Sbjct: 127 CKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRCKPFHYDRPWQRATAREA 177
>gi|348502214|ref|XP_003438664.1| PREDICTED: netrin-3-like [Oreochromis niloticus]
Length = 634
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVC+ CRH TAGRHCHYCKEG+Y
Sbjct: 340 RANAREANECLPCNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFY 399
Query: 83 RDPSRPITHRKACK 96
RD +RPITHR+ACK
Sbjct: 400 RDMARPITHRRACK 413
>gi|347963403|ref|XP_310908.5| AGAP000225-PA [Anopheles gambiae str. PEST]
gi|333467216|gb|EAA06389.5| AGAP000225-PA [Anopheles gambiae str. PEST]
Length = 717
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD + CNCN HAR+CRFNMELYK+SGR SGGVCL CRH T GRHCHYC+EG+Y
Sbjct: 382 RANARDANECKACNCNGHARRCRFNMELYKMSGRISGGVCLSCRHATTGRHCHYCREGFY 441
Query: 83 RDPSRPITHRKACK 96
RD ++PITHRK CK
Sbjct: 442 RDATKPITHRKVCK 455
>gi|291405054|ref|XP_002719022.1| PREDICTED: netrin 1, partial [Oryctolagus cuniculus]
Length = 474
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 284 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 343
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKAC+
Sbjct: 344 RDMGKPITHRKACR 357
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + + GG+ CRH TAG C C
Sbjct: 223 ARDSYFYAVSDLQVGGRCKCNGHAARCVRDRD---------GGLVCDCRHNTAGPECDRC 273
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 274 KPFHYDRPWQRATAREA 290
>gi|432922842|ref|XP_004080386.1| PREDICTED: netrin-3-like [Oryzias latipes]
Length = 630
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVC+ CRH TAGRHCHYCKEG+Y
Sbjct: 340 RANAREANECLPCNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFY 399
Query: 83 RDPSRPITHRKACK 96
RD RPITHR+ACK
Sbjct: 400 RDMGRPITHRRACK 413
>gi|417411736|gb|JAA52295.1| Putative extracellular matrix glycoprotein laminin subunit beta,
partial [Desmodus rotundus]
Length = 578
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 303 RATAREANECVACSCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 362
Query: 83 RDPSRPITHRKACK 96
RD +PITHRKACK
Sbjct: 363 RDMGKPITHRKACK 376
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA +C + R VC CRH TAG C C
Sbjct: 242 ARDSYFYAVSDLQVGGRCKCNGHAARC--------VRDRDDSLVC-DCRHNTAGPECDRC 292
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 293 KPFHYDRPWQRATAREA 309
>gi|115686177|ref|XP_781902.2| PREDICTED: netrin-1-like [Strongylocentrotus purpuratus]
Length = 623
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 56/62 (90%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HARKCRFNMELYKLSGR SGGVCL+CRH T GR+CHYCKEGYYRD S+PITHRK
Sbjct: 354 CNCNLHARKCRFNMELYKLSGRKSGGVCLKCRHNTDGRYCHYCKEGYYRDQSKPITHRKV 413
Query: 95 CK 96
CK
Sbjct: 414 CK 415
>gi|62005680|dbj|BAD91310.1| axon guidance molecule HpNetrin [Hemicentrotus pulcherrimus]
Length = 623
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 56/62 (90%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HARKCRFNMELYKLSGR SGGVCL+CRH T GR+CHYCKEGYYRD S+PITHRK
Sbjct: 354 CNCNLHARKCRFNMELYKLSGRKSGGVCLKCRHNTDGRYCHYCKEGYYRDQSKPITHRKV 413
Query: 95 CK 96
CK
Sbjct: 414 CK 415
>gi|449479002|ref|XP_002186740.2| PREDICTED: netrin-1-like [Taeniopygia guttata]
Length = 345
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/65 (80%), Positives = 59/65 (90%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ CNCN HAR+CRFNMEL+KLSGR SGGVCL CRH TAGRHCHYCKEG+YRD S+PI+HR
Sbjct: 80 KACNCNLHARRCRFNMELFKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHR 139
Query: 93 KACKK 97
KACK+
Sbjct: 140 KACKE 144
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 57/63 (90%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
CNCN HAR+CRFNMEL+KLSGR SGGVCL CRH TAGRHCHYCKEG+YRD S+PI+HRK
Sbjct: 18 ACNCNLHARRCRFNMELFKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRK 77
Query: 94 ACK 96
ACK
Sbjct: 78 ACK 80
>gi|410901788|ref|XP_003964377.1| PREDICTED: netrin-1-like [Takifugu rubripes]
Length = 600
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 328 RATAREANECIACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYY 387
Query: 83 RDPSRPITHRKACK 96
RD S+PI+HR+ACK
Sbjct: 388 RDMSKPISHRRACK 401
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA KC + E G + +C+H TAG C C
Sbjct: 267 ARDSYFYAVSDLQVGGRCKCNGHASKCVKDRE---------GNLVCECKHNTAGPECDRC 317
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 318 KPFHYDRPWQRATAREA 334
>gi|395533432|ref|XP_003768764.1| PREDICTED: netrin-1 [Sarcophilus harrisii]
Length = 604
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 329 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY 388
Query: 83 RDPSRPITHRKACK 96
RD ++ ITHRKACK
Sbjct: 389 RDMNKLITHRKACK 402
>gi|157133730|ref|XP_001662986.1| netrin [Aedes aegypti]
gi|108881491|gb|EAT45716.1| AAEL003048-PA [Aedes aegypti]
Length = 263
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R + R + Q CNCN HARKCRFN++LYKLSGR SGGVC+ CRH T GRHCHYC+EG+Y
Sbjct: 3 RPAGRSIVCLQACNCNGHARKCRFNLDLYKLSGRVSGGVCIDCRHDTTGRHCHYCREGFY 62
Query: 83 RDPSRPITHRKACK 96
+DP++ ITH+KACK
Sbjct: 63 KDPTKSITHKKACK 76
>gi|297283282|ref|XP_002802409.1| PREDICTED: netrin-3-like [Macaca mulatta]
Length = 577
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 299 RATARESHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 358
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 359 RDPGRALSDRRACR 372
>gi|2655297|gb|AAB87983.1| netrin-1 [Xenopus laevis]
Length = 569
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMEL+KLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 294 RATAREANECVACNCNLHARRCRFNMELFKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYY 353
Query: 83 RDPSRPITHRKACK 96
RD ++ ITHRKACK
Sbjct: 354 RDMTKAITHRKACK 367
>gi|432871176|ref|XP_004071870.1| PREDICTED: netrin-1-like [Oryzias latipes]
Length = 600
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGY+
Sbjct: 328 RATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYF 387
Query: 83 RDPSRPITHRKACK 96
RD S+PI+HR+ACK
Sbjct: 388 RDMSKPISHRRACK 401
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA KC + E G + +C+H TAG C C
Sbjct: 267 ARDSYFYAVSDLQVGGRCKCNGHASKCVKDRE---------GNLVCECKHNTAGPECDRC 317
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 318 KPFHYDRPWQRATAREA 334
>gi|363739763|ref|XP_415047.3| PREDICTED: netrin-3 [Gallus gallus]
Length = 587
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R S+R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 312 RASAREANECLACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 371
Query: 83 RDPSRPITHRKACK 96
RD S+ IT RKACK
Sbjct: 372 RDLSKSITDRKACK 385
>gi|395835787|ref|XP_003790854.1| PREDICTED: netrin-3 [Otolemur garnettii]
Length = 575
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN+HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 294 RATARESHACLACSCNSHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 353
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 354 RDPGRALSDRRACR 367
>gi|2497606|sp|Q90923.1|NET3_CHICK RecName: Full=Netrin-3; AltName: Full=Netrin-2; Flags: Precursor
gi|529421|gb|AAA61743.1| netrin-2, partial [Gallus gallus]
Length = 581
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R S+R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 306 RASAREANECLACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 365
Query: 83 RDPSRPITHRKACK 96
RD S+ IT RKACK
Sbjct: 366 RDLSKSITDRKACK 379
>gi|157133720|ref|XP_001662981.1| netrin [Aedes aegypti]
gi|108881486|gb|EAT45711.1| AAEL003024-PA [Aedes aegypti]
Length = 646
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ + CNCN HAR+CRFNMEL+K+SGR SGGVCL CRH T GRHCHYC+EGYY
Sbjct: 372 RANARESNECKVCNCNGHARRCRFNMELFKMSGRISGGVCLNCRHATTGRHCHYCREGYY 431
Query: 83 RDPSRPITHRKACKK 97
RD ++PI HRK CK
Sbjct: 432 RDATKPIMHRKVCKP 446
>gi|158289139|ref|XP_566169.3| AGAP000224-PA [Anopheles gambiae str. PEST]
Length = 352
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 55/65 (84%)
Query: 32 FQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
CNCN HAR+CRFNMELYK+SGR SGGVCL CRH T GRHCHYC+EG+YRD ++PITH
Sbjct: 1 MPACNCNGHARRCRFNMELYKMSGRISGGVCLSCRHATTGRHCHYCREGFYRDATKPITH 60
Query: 92 RKACK 96
RK CK
Sbjct: 61 RKVCK 65
>gi|431906648|gb|ELK10769.1| Netrin-3 [Pteropus alecto]
Length = 580
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 299 RATAREAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 358
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 359 RDPGRALSDRRACR 372
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + + G + CRH T G C CK Y P + T R+A
Sbjct: 255 CKCNGHASRCLLD---------TQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRATAREA 305
>gi|402907346|ref|XP_003916437.1| PREDICTED: netrin-3 [Papio anubis]
Length = 580
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 299 RATARESHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 358
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 359 RDPGRALSDRRACR 372
>gi|335284868|ref|XP_003354720.1| PREDICTED: netrin-3 [Sus scrofa]
Length = 580
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 299 RATAREAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 358
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 359 RDPGRALSDRRACR 372
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA KC + + G + CRH T G C CK Y P + T R+A
Sbjct: 255 CKCNGHASKCLLD---------TQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRATAREA 305
>gi|426380822|ref|XP_004057059.1| PREDICTED: netrin-3 [Gorilla gorilla gorilla]
Length = 580
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 299 RATARESHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 358
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 359 RDPGRALSDRRACR 372
>gi|348585553|ref|XP_003478536.1| PREDICTED: netrin-3-like [Cavia porcellus]
Length = 577
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 59/74 (79%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 299 RATAREAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 358
Query: 83 RDPSRPITHRKACK 96
RDP R + R+AC+
Sbjct: 359 RDPDRALNDRRACR 372
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + + G + CRH T G C CK Y P + T R+A
Sbjct: 255 CKCNGHASRCLLD---------TQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRATAREA 305
>gi|327287316|ref|XP_003228375.1| PREDICTED: netrin-3-like [Anolis carolinensis]
Length = 587
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 312 RATAREANECLACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 371
Query: 83 RDPSRPITHRKACK 96
RD S+ IT RKACK
Sbjct: 372 RDMSKAITDRKACK 385
>gi|332634763|ref|NP_001193834.1| netrin-3 precursor [Bos taurus]
gi|296473584|tpg|DAA15699.1| TPA: netrin 3 [Bos taurus]
Length = 580
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 299 RATAREAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 358
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 359 RDPGRALSDRRACR 372
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C + + G + CRH T G C CK Y P + T R+A
Sbjct: 255 CKCNGHASRCLLDPQ---------GHLTCDCRHGTEGPDCSRCKPFYCDRPWQRATAREA 305
>gi|259013386|ref|NP_001158400.1| netrin1 precursor [Saccoglossus kowalevskii]
gi|90660003|gb|ABD97277.1| netrin1 [Saccoglossus kowalevskii]
Length = 596
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 55/62 (88%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HARKCRFNMELY LSGR SGGVCL CRH TAGR+CHYC+EGYYRD S+PITHRKA
Sbjct: 339 CICNLHARKCRFNMELYNLSGRKSGGVCLNCRHNTAGRYCHYCEEGYYRDQSKPITHRKA 398
Query: 95 CK 96
CK
Sbjct: 399 CK 400
>gi|5453810|ref|NP_006172.1| netrin-3 precursor [Homo sapiens]
gi|56404431|sp|O00634.1|NET3_HUMAN RecName: Full=Netrin-3; AltName: Full=Netrin-2-like protein; Flags:
Precursor
gi|2052393|gb|AAC51246.1| netrin-2 like protein [Homo sapiens]
gi|2052395|gb|AAC51247.1| netrin-2 like protein [Homo sapiens]
gi|119605910|gb|EAW85504.1| netrin 2-like (chicken) [Homo sapiens]
Length = 580
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 299 RATARESHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 358
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 359 RDPGRALSDRRACR 372
>gi|345801976|ref|XP_537003.3| PREDICTED: netrin-3 [Canis lupus familiaris]
Length = 577
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 299 RATAREAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 358
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 359 RDPGRALSDRRACR 372
>gi|170063796|ref|XP_001867259.1| netrin [Culex quinquefasciatus]
gi|167881310|gb|EDS44693.1| netrin [Culex quinquefasciatus]
Length = 90
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 55/62 (88%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HAR+CRFNMEL+K+SGR SGGVCL CRH T GRHCHYC+EGYYRD ++PITHRK
Sbjct: 15 CNCNGHARRCRFNMELFKMSGRISGGVCLNCRHATTGRHCHYCREGYYRDATKPITHRKV 74
Query: 95 CK 96
CK
Sbjct: 75 CK 76
>gi|190337452|gb|AAI63393.1| Ntn1b protein [Danio rerio]
Length = 602
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 328 RATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYY 387
Query: 83 RDPSRPITHRKACK 96
RD S+ I+HR+ACK
Sbjct: 388 RDMSKAISHRRACK 401
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA KC + E G + +C+H TAG C C
Sbjct: 267 ARDSYFYAVSDLQVGGRCKCNGHASKCVKDRE---------GNLVCECKHNTAGPECDRC 317
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 318 KPFHYDRPWQRATAREA 334
>gi|199428310|emb|CAP71949.2| ntn1b [Danio rerio]
Length = 601
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 328 RATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYY 387
Query: 83 RDPSRPITHRKACK 96
RD S+ I+HR+ACK
Sbjct: 388 RDMSKAISHRRACK 401
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA KC + E G + +C+H TAG C C
Sbjct: 267 ARDSYFYAVSDLQVGGRCKCNGHASKCVKDRE---------GNLVCECKHNTAGPECDRC 317
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 318 KPFHYDRPWQRATAREA 334
>gi|143347082|gb|ABO93214.1| Netrin [Platynereis dumerilii]
Length = 558
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R S+++ C CN HAR+C+FNMELYKLSGR SGGVCL C+H TAGR+CHYCKEGYY
Sbjct: 328 RASAKEANECVACKCNLHARQCQFNMELYKLSGRKSGGVCLNCKHNTAGRNCHYCKEGYY 387
Query: 83 RDPSRPITHRKACK 96
RD ++PITHRKACK
Sbjct: 388 RDQAKPITHRKACK 401
>gi|126335688|ref|XP_001370742.1| PREDICTED: netrin-3 [Monodelphis domestica]
Length = 583
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/62 (75%), Positives = 56/62 (90%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+YRD +R ++HR+A
Sbjct: 317 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDQTRVLSHRRA 376
Query: 95 CK 96
CK
Sbjct: 377 CK 378
>gi|403273628|ref|XP_003928608.1| PREDICTED: netrin-3 [Saimiri boliviensis boliviensis]
Length = 578
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 59/74 (79%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 298 RATAREPHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 357
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+ C+
Sbjct: 358 RDPGRALSDRRVCR 371
>gi|18859143|ref|NP_571073.1| netrin 1b precursor [Danio rerio]
gi|2394302|gb|AAB70266.1| netrin 1 [Danio rerio]
Length = 602
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 328 RATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYY 387
Query: 83 RDPSRPITHRKACK 96
RD S+ I+HR+ACK
Sbjct: 388 RDMSKAISHRRACK 401
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA KC + E G + +C+H TAG C C
Sbjct: 267 ARDSYFYAVSDLQVGGRCKCNGHASKCVKDRE---------GNLVCECKHNTAGPECDRC 317
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 318 KPFHYDRPWQRATAREA 334
>gi|332845056|ref|XP_003314975.1| PREDICTED: LOW QUALITY PROTEIN: netrin-3, partial [Pan troglodytes]
Length = 537
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 256 RATARESHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 315
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 316 RDPGRALSDRRACR 329
>gi|82658270|ref|NP_001032492.1| netrin-3 [Danio rerio]
gi|62866615|gb|AAY17259.1| netrin 2 precursor [Danio rerio]
Length = 600
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 55/62 (88%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HAR+CRFNMELYKLSGR SGGVC+ CRH TAGRHCHYCKEG+YRD + ITHR+A
Sbjct: 335 CNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFYRDMGKAITHRRA 394
Query: 95 CK 96
CK
Sbjct: 395 CK 396
>gi|441659620|ref|XP_003269111.2| PREDICTED: uncharacterized protein LOC100591655 [Nomascus
leucogenys]
Length = 782
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 501 RATARESHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 560
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 561 RDPGRALSDRRACR 574
>gi|301605684|ref|XP_002932466.1| PREDICTED: netrin-3-like [Xenopus (Silurana) tropicalis]
Length = 588
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 59/74 (79%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C CN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+Y
Sbjct: 313 RATAREANECMACTCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY 372
Query: 83 RDPSRPITHRKACK 96
RD SR IT R+ACK
Sbjct: 373 RDVSRAITDRRACK 386
>gi|281306763|ref|NP_446184.1| netrin 3 precursor [Rattus norvegicus]
gi|149051997|gb|EDM03814.1| netrin 2-like (chicken) [Rattus norvegicus]
Length = 580
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 46/62 (74%), Positives = 55/62 (88%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+YRDP R ++ R+A
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRA 370
Query: 95 CK 96
C+
Sbjct: 371 CR 372
>gi|6754904|ref|NP_035077.1| netrin-3 precursor [Mus musculus]
gi|56404670|sp|Q9R1A3.1|NET3_MOUSE RecName: Full=Netrin-3; AltName: Full=Netrin-2-like protein; Flags:
Precursor
gi|5107302|gb|AAD40063.1|AF152418_1 netrin-3 [Mus musculus]
gi|26327107|dbj|BAC27297.1| unnamed protein product [Mus musculus]
gi|62871707|gb|AAH94362.1| Netrin 3 [Mus musculus]
gi|74202588|dbj|BAE24860.1| unnamed protein product [Mus musculus]
gi|148690352|gb|EDL22299.1| netrin 2-like (chicken), isoform CRA_a [Mus musculus]
Length = 580
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 46/62 (74%), Positives = 55/62 (88%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+YRDP R ++ R+A
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRA 370
Query: 95 CK 96
C+
Sbjct: 371 CR 372
>gi|354494916|ref|XP_003509580.1| PREDICTED: netrin-3 [Cricetulus griseus]
gi|344253649|gb|EGW09753.1| Netrin-3 [Cricetulus griseus]
Length = 580
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 46/62 (74%), Positives = 55/62 (88%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+YRDP R ++ R+A
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRA 370
Query: 95 CK 96
C+
Sbjct: 371 CR 372
>gi|5326872|gb|AAD42078.1|AF149094_1 axon guidance cue netrin-3 [Mus musculus]
Length = 580
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 46/62 (74%), Positives = 55/62 (88%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+YRDP R ++ R+A
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRA 370
Query: 95 CK 96
C+
Sbjct: 371 CR 372
>gi|410985513|ref|XP_003999066.1| PREDICTED: netrin-3 [Felis catus]
Length = 475
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 299 RATAREAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 358
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 359 RDPGRALSDRRACR 372
>gi|47183888|emb|CAG14362.1| unnamed protein product [Tetraodon nigroviridis]
Length = 63
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 57/63 (90%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C+CN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYYRD S+PI+HR+
Sbjct: 1 ACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRR 60
Query: 94 ACK 96
ACK
Sbjct: 61 ACK 63
>gi|348511211|ref|XP_003443138.1| PREDICTED: netrin-1-like [Oreochromis niloticus]
Length = 600
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 61/74 (82%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYY
Sbjct: 328 RATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYY 387
Query: 83 RDPSRPITHRKACK 96
RD ++ I+HR+ACK
Sbjct: 388 RDMTKSISHRRACK 401
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 17/77 (22%)
Query: 26 SRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
+RD F+ C CN HA KC + E G + +C+H TAG C C
Sbjct: 267 ARDSYFYAVSDLQVGGRCKCNGHASKCVKDRE---------GNLVCECKHNTAGPECDRC 317
Query: 78 KEGYYRDPSRPITHRKA 94
K +Y P + T R+A
Sbjct: 318 KPFHYDRPWQRATAREA 334
>gi|397469240|ref|XP_003806269.1| PREDICTED: netrin-3 [Pan paniscus]
Length = 542
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 59/74 (79%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 299 RATARESHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 358
Query: 83 RDPSRPITHRKACK 96
RDP R ++ +AC+
Sbjct: 359 RDPGRALSDHRACR 372
>gi|149566529|ref|XP_001515541.1| PREDICTED: netrin-3-like, partial [Ornithorhynchus anatinus]
Length = 278
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%)
Query: 31 FFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT 90
C+CN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYC+EGYYRD +RP++
Sbjct: 11 LPAACSCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCREGYYRDRARPVS 70
Query: 91 HRKACK 96
R+ACK
Sbjct: 71 DRRACK 76
>gi|355709873|gb|EHH31337.1| hypothetical protein EGK_12388, partial [Macaca mulatta]
Length = 387
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 195 RATARESHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 254
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 255 RDPGRALSDRRACR 268
>gi|390471146|ref|XP_002807437.2| PREDICTED: netrin-3 [Callithrix jacchus]
Length = 559
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 59/74 (79%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 298 RATAREPHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCQEGFY 357
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+ C+
Sbjct: 358 RDPGRALSDRRVCR 371
>gi|351696323|gb|EHA99241.1| Netrin-3 [Heterocephalus glaber]
Length = 490
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 59/74 (79%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSG SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 299 RATARETHACLACSCNGHARRCRFNMELYRLSGHRSGGVCLNCRHNTAGRHCHYCQEGFY 358
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 359 RDPDRSLSDRRACR 372
>gi|344292000|ref|XP_003417716.1| PREDICTED: netrin-3-like [Loxodonta africana]
Length = 571
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 58/74 (78%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN H R+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 290 RATTREAHACLACSCNGHTRRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 349
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R AC+
Sbjct: 350 RDPGRALSDRHACR 363
>gi|4732099|gb|AAD28603.1|AF128866_1 netrin-3 precursor [Mus musculus]
Length = 580
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/62 (72%), Positives = 54/62 (87%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+YRDP R ++ R+
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRG 370
Query: 95 CK 96
C+
Sbjct: 371 CR 372
>gi|324510416|gb|ADY44356.1| Netrin unc-6, partial [Ascaris suum]
Length = 607
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 55/63 (87%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
CNCN HA+KCRFNMELYKLSG SGGVC+ CRH TAGR+CHYCK G+YRD ++PITHRK
Sbjct: 344 ACNCNLHAKKCRFNMELYKLSGNRSGGVCINCRHNTAGRNCHYCKPGFYRDHTKPITHRK 403
Query: 94 ACK 96
ACK
Sbjct: 404 ACK 406
>gi|390479232|ref|XP_003735673.1| PREDICTED: LOW QUALITY PROTEIN: netrin-5 [Callithrix jacchus]
Length = 460
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/69 (62%), Positives = 55/69 (79%)
Query: 30 IFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPI 89
I C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PI
Sbjct: 207 ILLLACSCNQHARRCRFNSELFRLSGGQSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPI 266
Query: 90 THRKACKKV 98
+ KAC+ +
Sbjct: 267 SSHKACRGI 275
>gi|47181953|emb|CAG14361.1| unnamed protein product [Tetraodon nigroviridis]
Length = 63
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 56/63 (88%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C+CN HA +CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCKEGYYRD S+PI+HR+
Sbjct: 1 ACHCNLHAARCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRR 60
Query: 94 ACK 96
ACK
Sbjct: 61 ACK 63
>gi|297697850|ref|XP_002826053.1| PREDICTED: netrin-3, partial [Pongo abelii]
Length = 482
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR +GGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 201 RATARESHACLACSCNGHARRCRFNMELYRLSGRRTGGVCLNCRHNTAGRHCHYCREGFY 260
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 261 RDPGRALSDRRACR 274
>gi|347963407|ref|XP_310904.5| AGAP000228-PA [Anopheles gambiae str. PEST]
gi|333467214|gb|EAA06724.5| AGAP000228-PA [Anopheles gambiae str. PEST]
Length = 666
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 59/74 (79%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R + RD + C CN HARKCRFN++LYK+SGR SGGVC CRH T GRHCHYC+EG++
Sbjct: 389 RGTMRDANECKACQCNGHARKCRFNLDLYKMSGRVSGGVCTDCRHDTTGRHCHYCREGFF 448
Query: 83 RDPSRPITHRKACK 96
+DP++PITH+K CK
Sbjct: 449 KDPTKPITHKKTCK 462
>gi|281342135|gb|EFB17719.1| hypothetical protein PANDA_016247 [Ailuropoda melanoleuca]
Length = 494
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 60/75 (80%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 282 RATAREAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 341
Query: 83 RDPSRPITHRKACKK 97
RDP R ++ R+AC+
Sbjct: 342 RDPGRALSDRRACRA 356
>gi|395515970|ref|XP_003762170.1| PREDICTED: netrin-3 [Sarcophilus harrisii]
Length = 493
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 56/63 (88%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+YRD +R ++HR+
Sbjct: 317 ACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDQTRVLSHRR 376
Query: 94 ACK 96
ACK
Sbjct: 377 ACK 379
>gi|440913501|gb|ELR62950.1| Netrin-3, partial [Bos grunniens mutus]
Length = 381
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+Y
Sbjct: 216 RATAREAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFY 275
Query: 83 RDPSRPITHRKACK 96
RDP R ++ R+AC+
Sbjct: 276 RDPGRALSDRRACR 289
>gi|195457290|ref|XP_002075510.1| GK18481 [Drosophila willistoni]
gi|194171595|gb|EDW86496.1| GK18481 [Drosophila willistoni]
Length = 707
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 58/74 (78%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R +SRD + CNCN HAR+CRFNME+++LS SGGVC CRH T GR+CH CKEG+Y
Sbjct: 346 RATSRDANECKMCNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFY 405
Query: 83 RDPSRPITHRKACK 96
RDPS+P+THRK CK
Sbjct: 406 RDPSKPLTHRKVCK 419
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA KC + ++G + +CRH TAGR C CK ++ P T R A
Sbjct: 301 CKCNGHASKCSPD--------ETTGQLSCECRHNTAGRDCERCKPFHFDRPWGRATSRDA 352
>gi|443719325|gb|ELU09550.1| hypothetical protein CAPTEDRAFT_212564 [Capitella teleta]
Length = 571
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 54/65 (83%)
Query: 32 FQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
+ C CN HAR+CRFN ELY LSGR GGVCL+CRH TAGRHCHYCKEGYY+D ++PITH
Sbjct: 362 YTACQCNLHARRCRFNKELYLLSGRRGGGVCLKCRHNTAGRHCHYCKEGYYQDKTKPITH 421
Query: 92 RKACK 96
RK C+
Sbjct: 422 RKVCQ 426
>gi|354469706|ref|XP_003497266.1| PREDICTED: netrin-1-like [Cricetulus griseus]
Length = 295
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 51/65 (78%)
Query: 32 FQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
CNCN HAR+CRFNMELYKLSGR SGGVC C A RHCHYCKEG+YRD +PITH
Sbjct: 23 LDACNCNLHARRCRFNMELYKLSGRKSGGVCPTCPQNPAARHCHYCKEGFYRDMGKPITH 82
Query: 92 RKACK 96
RKACK
Sbjct: 83 RKACK 87
>gi|431920797|gb|ELK18570.1| Carbonic anhydrase-related protein 11, partial [Pteropus alecto]
Length = 578
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/62 (69%), Positives = 53/62 (85%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDP +PIT RKA
Sbjct: 85 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPDQPITSRKA 144
Query: 95 CK 96
C+
Sbjct: 145 CR 146
>gi|426255043|ref|XP_004023198.1| PREDICTED: LOW QUALITY PROTEIN: netrin-3-like, partial [Ovis aries]
Length = 496
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/75 (64%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHF-TAGRHCHYCKEGY 81
R ++R+ C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+
Sbjct: 187 RATAREAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHHNTAGRHCHYCREGF 246
Query: 82 YRDPSRPITHRKACK 96
YRDP R ++ R+AC+
Sbjct: 247 YRDPGRALSDRRACR 261
>gi|410982634|ref|XP_003997657.1| PREDICTED: netrin-5 [Felis catus]
Length = 480
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/62 (70%), Positives = 54/62 (87%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PIT RKA
Sbjct: 203 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCRPGFWRDPSQPITSRKA 262
Query: 95 CK 96
C+
Sbjct: 263 CR 264
>gi|118404128|ref|NP_001072385.1| netrin 1 precursor [Xenopus (Silurana) tropicalis]
gi|111306023|gb|AAI21569.1| netrin 1 [Xenopus (Silurana) tropicalis]
Length = 601
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 53/64 (82%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C CN H+ +CRFNMELYKLSGR SGGVCL CRH TAGRHCHYCK+GY RD S+PIT RK
Sbjct: 332 ACECNLHSHRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKQGYKRDLSKPITSRK 391
Query: 94 ACKK 97
ACK
Sbjct: 392 ACKP 395
>gi|432102506|gb|ELK30077.1| TBC1 domain family member 24 [Myotis davidii]
Length = 828
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 53/63 (84%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C+CN HAR+CRFNMELY+LSGR SGGVCL CRH TAGRHCHYC+EG+YRDP R R+
Sbjct: 82 ACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRAPNDRR 141
Query: 94 ACK 96
AC+
Sbjct: 142 ACR 144
>gi|195394227|ref|XP_002055747.1| GJ18610 [Drosophila virilis]
gi|194150257|gb|EDW65948.1| GJ18610 [Drosophila virilis]
Length = 727
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 58/74 (78%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD + CNCNNHAR+CRFNM+++++S SGGVC CRH T GR+CH CKEGYY
Sbjct: 373 RATARDANECKMCNCNNHARQCRFNMDIFRISLGVSGGVCQNCRHSTTGRNCHLCKEGYY 432
Query: 83 RDPSRPITHRKACK 96
RDPS+P+ HRK CK
Sbjct: 433 RDPSKPLNHRKVCK 446
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA KC S S+G + +CRH TAGR C CK Y+ P T R A
Sbjct: 329 CKCNGHASKC---------SQDSNGQLSCECRHNTAGRDCDRCKPFYFDRPWGRATARDA 379
>gi|307183130|gb|EFN70047.1| Netrin-1 [Camponotus floridanus]
Length = 135
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/50 (92%), Positives = 49/50 (98%)
Query: 48 MELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKK 97
MELYKLSGR SGGVCLQCRHFTAGRHCHYC+EGYYRDP+RPITHRKACK+
Sbjct: 1 MELYKLSGRVSGGVCLQCRHFTAGRHCHYCREGYYRDPARPITHRKACKR 50
>gi|195131363|ref|XP_002010120.1| GI15750 [Drosophila mojavensis]
gi|193908570|gb|EDW07437.1| GI15750 [Drosophila mojavensis]
Length = 302
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 31 FFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT 90
++ C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYYRD ++P
Sbjct: 5 LYEMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPN 64
Query: 91 HRKACKK 97
HRK CK+
Sbjct: 65 HRKVCKR 71
>gi|395858502|ref|XP_003801607.1| PREDICTED: netrin-5 [Otolemur garnettii]
Length = 492
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 44/62 (70%), Positives = 54/62 (87%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PIT RKA
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGLSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPITSRKA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|163914519|ref|NP_001106343.1| uncharacterized protein LOC100127305 precursor [Xenopus laevis]
gi|161611997|gb|AAI55917.1| LOC100127305 protein [Xenopus laevis]
gi|213623406|gb|AAI69702.1| Hypothetical protein LOC100127305 [Xenopus laevis]
Length = 601
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 53/63 (84%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C CN H+ +CRFNMELYKLSGR SGG+CL CRH TAGRHCHYCK+GY RD ++PIT RK
Sbjct: 332 ACECNLHSHRCRFNMELYKLSGRKSGGICLNCRHNTAGRHCHYCKQGYKRDLTKPITSRK 391
Query: 94 ACK 96
ACK
Sbjct: 392 ACK 394
>gi|195354557|ref|XP_002043763.1| GM12041 [Drosophila sechellia]
gi|194128989|gb|EDW51032.1| GM12041 [Drosophila sechellia]
Length = 615
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYYRD ++P HRK
Sbjct: 319 VCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRK 378
Query: 94 ACKK 97
CK+
Sbjct: 379 VCKR 382
>gi|195394231|ref|XP_002055749.1| GJ18609 [Drosophila virilis]
gi|194150259|gb|EDW65950.1| GJ18609 [Drosophila virilis]
Length = 803
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R + D + C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYY
Sbjct: 498 RATDNDANECKMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYY 557
Query: 83 RDPSRPITHRKACKK 97
RD ++P HRK CK+
Sbjct: 558 RDATKPPNHRKVCKR 572
>gi|397486090|ref|XP_003814165.1| PREDICTED: LOW QUALITY PROTEIN: netrin-5 [Pan paniscus]
Length = 443
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 56/64 (87%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
++C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PI+ R
Sbjct: 165 RSCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPISSR 224
Query: 93 KACK 96
+ACK
Sbjct: 225 RACK 228
>gi|17530937|ref|NP_511155.1| Netrin-B, isoform A [Drosophila melanogaster]
gi|281360866|ref|NP_001162753.1| Netrin-B, isoform B [Drosophila melanogaster]
gi|281360868|ref|NP_001162754.1| Netrin-B, isoform C [Drosophila melanogaster]
gi|281360870|ref|NP_001162755.1| Netrin-B, isoform D [Drosophila melanogaster]
gi|386764413|ref|NP_001245668.1| Netrin-B, isoform E [Drosophila melanogaster]
gi|386764415|ref|NP_001245669.1| Netrin-B, isoform F [Drosophila melanogaster]
gi|2497608|sp|Q24568.1|NETB_DROME RecName: Full=Netrin-B; Flags: Precursor
gi|1407709|gb|AAB17534.1| Netrin-B [Drosophila melanogaster]
gi|1638882|gb|AAB17548.1| secreted axon guidance molecule [Drosophila melanogaster]
gi|7292994|gb|AAF48382.1| Netrin-B, isoform A [Drosophila melanogaster]
gi|272506105|gb|ACZ95288.1| Netrin-B, isoform B [Drosophila melanogaster]
gi|272506106|gb|ACZ95289.1| Netrin-B, isoform C [Drosophila melanogaster]
gi|272506107|gb|ACZ95290.1| Netrin-B, isoform D [Drosophila melanogaster]
gi|383293390|gb|AFH07382.1| Netrin-B, isoform E [Drosophila melanogaster]
gi|383293391|gb|AFH07383.1| Netrin-B, isoform F [Drosophila melanogaster]
Length = 793
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R + D + C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYY
Sbjct: 486 RATDNDANECKMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYY 545
Query: 83 RDPSRPITHRKACKK 97
RD ++P HRK CK+
Sbjct: 546 RDATKPPNHRKVCKR 560
>gi|442616337|ref|NP_001259546.1| Netrin-B, isoform G [Drosophila melanogaster]
gi|440216768|gb|AGB95388.1| Netrin-B, isoform G [Drosophila melanogaster]
Length = 785
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R + D + C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYY
Sbjct: 478 RATDNDANECKMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYY 537
Query: 83 RDPSRPITHRKACKK 97
RD ++P HRK CK+
Sbjct: 538 RDATKPPNHRKVCKR 552
>gi|195478615|ref|XP_002100582.1| GE16108 [Drosophila yakuba]
gi|194188106|gb|EDX01690.1| GE16108 [Drosophila yakuba]
Length = 545
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R + D + C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYY
Sbjct: 225 RATDNDANECKMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYY 284
Query: 83 RDPSRPITHRKACKK 97
RD ++P HRK CK+
Sbjct: 285 RDATKPPNHRKVCKR 299
>gi|312072905|ref|XP_003139279.1| hypothetical protein LOAG_03694 [Loa loa]
gi|307765560|gb|EFO24794.1| hypothetical protein LOAG_03694 [Loa loa]
Length = 409
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 58/74 (78%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R +S + CNCN HA++CRFNMELY+LSG SGGVC+ CRH TAGR+CHYCK GY+
Sbjct: 254 RATSENANHCVACNCNLHAKRCRFNMELYRLSGNKSGGVCINCRHNTAGRNCHYCKPGYF 313
Query: 83 RDPSRPITHRKACK 96
RD ++ ITHRKACK
Sbjct: 314 RDLTKSITHRKACK 327
>gi|170589499|ref|XP_001899511.1| Unc-6 protein precursor [Brugia malayi]
gi|158593724|gb|EDP32319.1| Unc-6 protein precursor, putative [Brugia malayi]
Length = 611
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 7/87 (8%)
Query: 17 EHLKKF-------RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFT 69
EH K F R +S + CNCN HA++CRFNMELY+LSG SGGVC+ CRH T
Sbjct: 321 EHCKTFHLDRPWGRATSENANHCVACNCNLHAKRCRFNMELYRLSGNKSGGVCINCRHNT 380
Query: 70 AGRHCHYCKEGYYRDPSRPITHRKACK 96
AGR+CHYCK GY+RD ++ +THRKACK
Sbjct: 381 AGRNCHYCKPGYFRDLTKSVTHRKACK 407
>gi|195040893|ref|XP_001991155.1| GH12220 [Drosophila grimshawi]
gi|193900913|gb|EDV99779.1| GH12220 [Drosophila grimshawi]
Length = 693
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 58/74 (78%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD + CNCNNHAR+CRFNM++++LS SGGVC CRH T GR+CH C+EG+Y
Sbjct: 338 RATARDANECKVCNCNNHARQCRFNMDIFRLSEGVSGGVCQNCRHSTTGRNCHLCREGFY 397
Query: 83 RDPSRPITHRKACK 96
RDPS+P+ HRK CK
Sbjct: 398 RDPSKPLGHRKVCK 411
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA KC + S G + +CRH TAGR C CK Y+ P T R A
Sbjct: 294 CKCNGHASKCSLD---------SRGQLSCECRHNTAGRDCERCKPFYFDRPWGRATARDA 344
>gi|195457286|ref|XP_002075508.1| GK18468 [Drosophila willistoni]
gi|194171593|gb|EDW86494.1| GK18468 [Drosophila willistoni]
Length = 820
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R + D + C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYY
Sbjct: 508 RATDSDANECKMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYY 567
Query: 83 RDPSRPITHRKACKK 97
RD ++P HRK CK+
Sbjct: 568 RDATKPPNHRKVCKR 582
>gi|350585353|ref|XP_003481941.1| PREDICTED: netrin-5-like [Sus scrofa]
Length = 500
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 55/63 (87%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
TC+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PIT RK
Sbjct: 212 TCSCNQHARRCRFNSELFRLSGGQSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPITSRK 271
Query: 94 ACK 96
AC+
Sbjct: 272 ACR 274
>gi|195040908|ref|XP_001991158.1| GH12218 [Drosophila grimshawi]
gi|193900916|gb|EDV99782.1| GH12218 [Drosophila grimshawi]
Length = 316
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 31 FFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT 90
+ C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYYRD ++P
Sbjct: 18 WTSLCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPN 77
Query: 91 HRKACKK 97
HRK CK+
Sbjct: 78 HRKVCKR 84
>gi|73948042|ref|XP_533628.2| PREDICTED: netrin-5 [Canis lupus familiaris]
Length = 519
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/62 (69%), Positives = 53/62 (85%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDP +PIT RKA
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPGQPITSRKA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|354493148|ref|XP_003508706.1| PREDICTED: netrin-5-like [Cricetulus griseus]
Length = 462
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/63 (68%), Positives = 54/63 (85%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PIT K
Sbjct: 181 SCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPITSHK 240
Query: 94 ACK 96
AC+
Sbjct: 241 ACR 243
>gi|194895010|ref|XP_001978164.1| GG19452 [Drosophila erecta]
gi|190649813|gb|EDV47091.1| GG19452 [Drosophila erecta]
Length = 425
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R + D + C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYY
Sbjct: 116 RATDNDANECKMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYY 175
Query: 83 RDPSRPITHRKACKK 97
RD ++P HRK CK+
Sbjct: 176 RDATKPPNHRKVCKR 190
>gi|402594018|gb|EJW87945.1| hypothetical protein WUBG_01144 [Wuchereria bancrofti]
Length = 531
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 7/87 (8%)
Query: 17 EHLKKF-------RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFT 69
EH K F R +S + CNCN HA++CRFNMELY+LSG SGGVC+ CRH T
Sbjct: 241 EHCKTFHLDRPWGRATSENANHCVACNCNLHAKRCRFNMELYRLSGNKSGGVCINCRHNT 300
Query: 70 AGRHCHYCKEGYYRDPSRPITHRKACK 96
AGR+CHYCK GY+RD ++ +THRK CK
Sbjct: 301 AGRNCHYCKPGYFRDLTKSVTHRKVCK 327
>gi|348559372|ref|XP_003465490.1| PREDICTED: netrin-5-like [Cavia porcellus]
Length = 490
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/62 (69%), Positives = 54/62 (87%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDP++PIT RKA
Sbjct: 213 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPNQPITSRKA 272
Query: 95 CK 96
C+
Sbjct: 273 CR 274
>gi|322787650|gb|EFZ13674.1| hypothetical protein SINV_01513 [Solenopsis invicta]
Length = 81
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/50 (92%), Positives = 49/50 (98%)
Query: 48 MELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKK 97
MELYKLSGR SGGVCLQCRHFTAGRHCHYC+EGYYRDP+RPITHRKACK+
Sbjct: 1 MELYKLSGRVSGGVCLQCRHFTAGRHCHYCREGYYRDPARPITHRKACKR 50
>gi|395751492|ref|XP_002829561.2| PREDICTED: netrin-5-like [Pongo abelii]
Length = 288
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 55/67 (82%)
Query: 30 IFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPI 89
I C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PI
Sbjct: 6 ILLLACSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPI 65
Query: 90 THRKACK 96
+ R+AC+
Sbjct: 66 SSRRACR 72
>gi|291415084|ref|XP_002723787.1| PREDICTED: netrin 5 [Oryctolagus cuniculus]
Length = 489
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/62 (70%), Positives = 54/62 (87%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PIT RKA
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPITSRKA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|195165394|ref|XP_002023524.1| GL20414 [Drosophila persimilis]
gi|194105629|gb|EDW27672.1| GL20414 [Drosophila persimilis]
Length = 298
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYYRD ++P HRK
Sbjct: 1 VCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRK 60
Query: 94 ACKK 97
CK+
Sbjct: 61 VCKR 64
>gi|198468765|ref|XP_002134113.1| GA29267, partial [Drosophila pseudoobscura pseudoobscura]
gi|198146560|gb|EDY72740.1| GA29267, partial [Drosophila pseudoobscura pseudoobscura]
Length = 298
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 52/64 (81%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYYRD ++P HRK
Sbjct: 1 VCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRK 60
Query: 94 ACKK 97
CK+
Sbjct: 61 VCKR 64
>gi|391347436|ref|XP_003747968.1| PREDICTED: netrin-1 [Metaseiulus occidentalis]
Length = 595
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 59/75 (78%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R +S++ Q C CN H+R CRFNMELYKLSG SGGVC++CRH TAGRHCH+C+EGYY
Sbjct: 314 RATSQNANECQPCQCNGHSRSCRFNMELYKLSGSRSGGVCIKCRHNTAGRHCHHCREGYY 373
Query: 83 RDPSRPITHRKACKK 97
R+P + +++ACK+
Sbjct: 374 RNPEVALNNKRACKQ 388
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA C + S + + QCRH TAGR C CK Y+ P T + A
Sbjct: 265 CKCNGHASACVPSSS----STAETPDLECQCRHNTAGRDCEKCKPFYFDRPWARATSQNA 320
>gi|16768000|gb|AAL28219.1| GH10173p [Drosophila melanogaster]
Length = 297
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 52/63 (82%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYYRD ++P HRK
Sbjct: 2 CQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKV 61
Query: 95 CKK 97
CK+
Sbjct: 62 CKR 64
>gi|194770723|ref|XP_001967438.1| GF19299 [Drosophila ananassae]
gi|190614588|gb|EDV30112.1| GF19299 [Drosophila ananassae]
Length = 342
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 52/63 (82%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HAR+CRFN+ELYKLSGR SGGVC C+H T GR+CHYC+EGYYRD ++P HRK
Sbjct: 50 CQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDANKPPNHRKV 109
Query: 95 CKK 97
CK+
Sbjct: 110 CKR 112
>gi|3978522|gb|AAC83376.1| netrin precursor [Hirudo medicinalis]
Length = 610
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 52/62 (83%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
CNCN HA +CRFN E+Y LSGR SGG+C++CRH T+GRHCHYC EGYYRD S+P+TH+
Sbjct: 350 ACNCNQHAHRCRFNKEMYLLSGRRSGGICVKCRHHTSGRHCHYCSEGYYRDLSKPMTHQM 409
Query: 94 AC 95
AC
Sbjct: 410 AC 411
>gi|114678286|ref|XP_512800.2| PREDICTED: netrin-5 [Pan troglodytes]
Length = 489
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/62 (69%), Positives = 54/62 (87%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PI+ R+A
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPISSRRA 271
Query: 95 CK 96
CK
Sbjct: 272 CK 273
>gi|335289919|ref|XP_003127332.2| PREDICTED: netrin-5 [Sus scrofa]
Length = 499
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/62 (70%), Positives = 54/62 (87%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PIT RKA
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGQSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPITSRKA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|391337339|ref|XP_003743027.1| PREDICTED: netrin-1-like [Metaseiulus occidentalis]
Length = 656
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 53/63 (84%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HAR CRFNMELYKLSG SGGVCL+CRH TAGR+CH+CKEG+YRD ++P+ H++
Sbjct: 365 CKCNGHARGCRFNMELYKLSGYRSGGVCLKCRHNTAGRYCHHCKEGFYRDHTKPLNHKRV 424
Query: 95 CKK 97
CK
Sbjct: 425 CKP 427
>gi|403299187|ref|XP_003940371.1| PREDICTED: netrin-5 [Saimiri boliviensis boliviensis]
Length = 510
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDP +PI+ RKA
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPGQPISSRKA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|426389470|ref|XP_004061144.1| PREDICTED: netrin-5 [Gorilla gorilla gorilla]
Length = 491
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 42/62 (67%), Positives = 54/62 (87%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PI+ R+A
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPISSRRA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|198468769|ref|XP_002134115.1| GA29271 [Drosophila pseudoobscura pseudoobscura]
gi|198146562|gb|EDY72742.1| GA29271 [Drosophila pseudoobscura pseudoobscura]
Length = 375
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNHAR+CRFNME+++ S SGGVC CRH T GR+CH CKEGYYRDP++P+ HRK
Sbjct: 24 CNCNNHARQCRFNMEIFRASQGVSGGVCQNCRHSTMGRNCHLCKEGYYRDPTKPLHHRKV 83
Query: 95 CK 96
CK
Sbjct: 84 CK 85
>gi|148690937|gb|EDL22884.1| mCG23194 [Mus musculus]
Length = 510
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 43/62 (69%), Positives = 53/62 (85%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PIT KA
Sbjct: 216 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPITSHKA 275
Query: 95 CK 96
C+
Sbjct: 276 CR 277
>gi|332308959|ref|NP_001193801.1| netrin-5 precursor [Bos taurus]
gi|296477583|tpg|DAA19698.1| TPA: netrin 5 [Bos taurus]
Length = 489
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDP +PI+ RKA
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPGQPISSRKA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|426244035|ref|XP_004015841.1| PREDICTED: LOW QUALITY PROTEIN: netrin-5 [Ovis aries]
Length = 477
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/62 (67%), Positives = 52/62 (83%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDP +PI RKA
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPGQPINSRKA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|24308065|ref|NP_665806.1| netrin-5 precursor [Homo sapiens]
gi|74730628|sp|Q8WTR8.2|NET5_HUMAN RecName: Full=Netrin-5; AltName: Full=Netrin-1-like protein; Flags:
Precursor
gi|21620130|gb|AAH33207.1| Netrin 5 [Homo sapiens]
gi|31416775|gb|AAH18654.2| Netrin 5 [Homo sapiens]
gi|31416854|gb|AAH18697.2| Netrin 5 [Homo sapiens]
gi|119572771|gb|EAW52386.1| hypothetical protein BC018697, isoform CRA_a [Homo sapiens]
Length = 489
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PI R+A
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|344269472|ref|XP_003406576.1| PREDICTED: netrin-5 [Loxodonta africana]
Length = 489
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +CRFN EL++LSG SGGVC +CRH T GRHCHYC+ G++RDPS+PIT RKA
Sbjct: 212 CFCNQHAWRCRFNAELFRLSGGLSGGVCERCRHHTTGRHCHYCQPGFWRDPSQPITSRKA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|402906187|ref|XP_003915885.1| PREDICTED: netrin-5 [Papio anubis]
Length = 489
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 54/62 (87%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+P++ R+A
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPMSSRRA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|194770727|ref|XP_001967440.1| GF19300 [Drosophila ananassae]
gi|190614590|gb|EDV30114.1| GF19300 [Drosophila ananassae]
Length = 721
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R +++D + CNCN HAR+CRFNME+++LS SGGVC CRH T GR+CH CKEG+Y
Sbjct: 363 RATAKDANECKECNCNRHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFY 422
Query: 83 RDPSRPITHRKACK 96
RD ++P+THRK CK
Sbjct: 423 RDATKPLTHRKVCK 436
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN H KC ++ +G + +CRH TAGR C CK Y+ P
Sbjct: 319 CKCNGHGSKCSPDV---------NGQLNCECRHNTAGRDCERCKPFYFDRP 360
>gi|308510879|ref|XP_003117622.1| CRE-UNC-6 protein [Caenorhabditis remanei]
gi|308238268|gb|EFO82220.1| CRE-UNC-6 protein [Caenorhabditis remanei]
Length = 612
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 51/63 (80%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
CNCN HA++CRF+ EL++LSG SGGVCL CRH TAGR+CH CK GY RD S P+THRK
Sbjct: 346 ACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGYVRDTSLPMTHRK 405
Query: 94 ACK 96
ACK
Sbjct: 406 ACK 408
>gi|195131367|ref|XP_002010122.1| GI15751 [Drosophila mojavensis]
gi|193908572|gb|EDW07439.1| GI15751 [Drosophila mojavensis]
Length = 743
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 56/74 (75%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD + CNCNNHA +CRFNM++++ S SGGVC CRH T GR+CH CKEGYY
Sbjct: 381 RATARDANECKKCNCNNHAHQCRFNMDIFRRSQGVSGGVCQNCRHSTTGRNCHQCKEGYY 440
Query: 83 RDPSRPITHRKACK 96
RDP++P+ HRK CK
Sbjct: 441 RDPNKPLDHRKVCK 454
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA KC S +SG + +CRH T GR C CK Y+ P T R A
Sbjct: 337 CKCNGHASKC---------SPDASGQLSCECRHNTDGRDCERCKPFYFDRPWGRATARDA 387
Query: 95 --CKK 97
CKK
Sbjct: 388 NECKK 392
>gi|355703738|gb|EHH30229.1| hypothetical protein EGK_10848 [Macaca mulatta]
Length = 424
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 54/62 (87%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+P++ R+A
Sbjct: 226 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPMSSRRA 285
Query: 95 CK 96
C+
Sbjct: 286 CR 287
>gi|195352612|ref|XP_002042806.1| GM17544 [Drosophila sechellia]
gi|194126837|gb|EDW48880.1| GM17544 [Drosophila sechellia]
Length = 702
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HAR+CRFNME+++LS SGGVC CRH T GR+CH CKEG+YRD ++P+THRK
Sbjct: 369 CNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKV 428
Query: 95 CK 96
CK
Sbjct: 429 CK 430
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA KC S +SG + +C H TAGR C CK ++ P T ++A
Sbjct: 313 CKCNGHASKC---------STDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEA 363
>gi|1407707|gb|AAB17533.1| Netrin-A [Drosophila melanogaster]
Length = 727
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HAR+CRFNME+++LS SGGVC CRH T GR+CH CKEG+YRD ++P+THRK
Sbjct: 369 CNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKV 428
Query: 95 CK 96
CK
Sbjct: 429 CK 430
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA KC S +SG + +C H TAGR C CK ++ P T ++A
Sbjct: 313 CKCNGHASKC---------STDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEA 363
>gi|1638880|gb|AAB17547.1| secreted axon guidance molecule [Drosophila melanogaster]
Length = 727
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HAR+CRFNME+++LS SGGVC CRH T GR+CH CKEG+YRD ++P+THRK
Sbjct: 369 CNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKV 428
Query: 95 CK 96
CK
Sbjct: 429 CK 430
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA KC S +SG + +C H TAGR C CK ++ P T ++A
Sbjct: 313 CKCNGHASKC---------STDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEA 363
>gi|195478607|ref|XP_002100580.1| GE16109 [Drosophila yakuba]
gi|194188104|gb|EDX01688.1| GE16109 [Drosophila yakuba]
Length = 731
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HAR+CRFNME+++LS SGGVC CRH T GR+CH CKEG+YRD ++P+THRK
Sbjct: 373 CNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKV 432
Query: 95 CK 96
CK
Sbjct: 433 CK 434
>gi|45549129|ref|NP_511154.3| Netrin-A, isoform A [Drosophila melanogaster]
gi|51704316|sp|Q24567.2|NETA_DROME RecName: Full=Netrin-A; Flags: Precursor
gi|45446952|gb|AAF48380.3| Netrin-A, isoform A [Drosophila melanogaster]
Length = 726
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HAR+CRFNME+++LS SGGVC CRH T GR+CH CKEG+YRD ++P+THRK
Sbjct: 369 CNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKV 428
Query: 95 CK 96
CK
Sbjct: 429 CK 430
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA KC S +SG + +C H TAGR C CK ++ P T ++A
Sbjct: 313 CKCNGHASKC---------STDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEA 363
>gi|386764411|ref|NP_001245667.1| Netrin-A, isoform B [Drosophila melanogaster]
gi|19528407|gb|AAL90318.1| RE11206p [Drosophila melanogaster]
gi|383293389|gb|AFH07381.1| Netrin-A, isoform B [Drosophila melanogaster]
Length = 667
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HAR+CRFNME+++LS SGGVC CRH T GR+CH CKEG+YRD ++P+THRK
Sbjct: 369 CNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKV 428
Query: 95 CK 96
CK
Sbjct: 429 CK 430
>gi|194895020|ref|XP_001978166.1| GG19453 [Drosophila erecta]
gi|190649815|gb|EDV47093.1| GG19453 [Drosophila erecta]
Length = 735
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HAR+CRFNME+++LS SGGVC CRH T GR+CH CKEG+YRD ++P+THRK
Sbjct: 372 CNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDSTKPLTHRKV 431
Query: 95 CK 96
CK
Sbjct: 432 CK 433
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA KC S +SG + +C H TAGR C CK ++ P T ++A
Sbjct: 316 CKCNGHASKC---------STDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEA 366
>gi|357625029|gb|EHJ75583.1| putative netrin [Danaus plexippus]
Length = 232
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 49/49 (100%)
Query: 48 MELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACK 96
MELYKLSGR+SGGVCL+CRH+TAGRHCHYC+EGYYRDP++PITH+KACK
Sbjct: 1 MELYKLSGRASGGVCLKCRHYTAGRHCHYCREGYYRDPTKPITHKKACK 49
>gi|405960238|gb|EKC26179.1| Netrin-3 [Crassostrea gigas]
Length = 652
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 54/64 (84%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ CNCN HAR+C FN ELY LSG+ SGGVCL+C+H TAGR CHYC+EG+YRDP++ +T R
Sbjct: 372 KACNCNLHARRCHFNRELYLLSGQKSGGVCLRCKHNTAGRFCHYCREGFYRDPTKTLTDR 431
Query: 93 KACK 96
+ACK
Sbjct: 432 RACK 435
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 56/74 (75%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R +S D CNCN HAR+CRFN LY LSG++SGGVC++CR TAGR+CHYC++GY+
Sbjct: 299 RATSADANACVACNCNLHARRCRFNEGLYTLSGKTSGGVCIKCRDNTAGRNCHYCRQGYF 358
Query: 83 RDPSRPITHRKACK 96
RD +P+TH ACK
Sbjct: 359 RDLDKPMTHLNACK 372
>gi|268579963|ref|XP_002644964.1| C. briggsae CBR-UNC-6 protein [Caenorhabditis briggsae]
Length = 608
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 51/63 (80%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
CNCN HA++CRF+ EL++LSG SGGVCL CRH TAGR+CH CK G+ RD S P+THRK
Sbjct: 342 ACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRK 401
Query: 94 ACK 96
ACK
Sbjct: 402 ACK 404
>gi|17570167|ref|NP_509165.1| Protein UNC-6 [Caenorhabditis elegans]
gi|465001|sp|P34710.1|UNC6_CAEEL RecName: Full=Netrin unc-6; AltName: Full=Uncoordinated protein 6;
Flags: Precursor
gi|289724|gb|AAA28157.1| unc-6 [Caenorhabditis elegans]
gi|351060259|emb|CCD67895.1| Protein UNC-6 [Caenorhabditis elegans]
Length = 612
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 51/63 (80%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
CNCN HA++CRF+ EL++LSG SGGVCL CRH TAGR+CH CK G+ RD S P+THRK
Sbjct: 346 ACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRK 405
Query: 94 ACK 96
ACK
Sbjct: 406 ACK 408
>gi|391347365|ref|XP_003747934.1| PREDICTED: netrin-1-like [Metaseiulus occidentalis]
Length = 569
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 50/62 (80%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H+R CRFNMELYKLSG SGGVC++CRH TAGRHCH+C+EG+YRD P H++
Sbjct: 334 CQCNGHSRSCRFNMELYKLSGMRSGGVCIRCRHNTAGRHCHHCREGFYRDSKLPAGHKRV 393
Query: 95 CK 96
CK
Sbjct: 394 CK 395
>gi|31419035|gb|AAH21210.2| NTN5 protein [Homo sapiens]
gi|119572772|gb|EAW52387.1| hypothetical protein BC018697, isoform CRA_b [Homo sapiens]
Length = 350
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PI R+A
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|119572773|gb|EAW52388.1| hypothetical protein BC018697, isoform CRA_c [Homo sapiens]
Length = 400
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRFN EL++LSG SGGVC +CRH TAGRHCHYC+ G++RDPS+PI R+A
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRA 271
Query: 95 CK 96
C+
Sbjct: 272 CR 273
>gi|341896986|gb|EGT52921.1| hypothetical protein CAEBREN_09948 [Caenorhabditis brenneri]
Length = 612
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 51/63 (80%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
CNCN HA++CRF+ EL++LSG SGGVCL CRH TAGR+CH CK G+ RD + P+THRK
Sbjct: 346 ACNCNQHAKRCRFDSELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTTLPMTHRK 405
Query: 94 ACK 96
ACK
Sbjct: 406 ACK 408
>gi|156371698|ref|XP_001628899.1| predicted protein [Nematostella vectensis]
gi|156215887|gb|EDO36836.1| predicted protein [Nematostella vectensis]
Length = 552
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 55/65 (84%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ CNCN HAR C F+MEL+KLSG SGGVC++CRH TAGR+CHYC+EG+Y+DP++ ITH
Sbjct: 291 KMCNCNLHARTCVFSMELFKLSGGRSGGVCVKCRHNTAGRYCHYCREGFYKDPNKHITHI 350
Query: 93 KACKK 97
K C++
Sbjct: 351 KVCRQ 355
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HA +C +S R+ VC C+H T G C C+ + P RP TH A
Sbjct: 237 CHCNGHASEC--------VSDRNGRQVC-DCKHNTVGVDCGACRPFFNDRPWRPATHHSA 287
>gi|116812165|dbj|BAF35976.1| netrin [Molgula tectiformis]
Length = 293
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 51/62 (82%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C CN HA++CRF+M L+ LSG SGG+C+ C+H TAGR+CHYCKEG+YR+P +PITH K
Sbjct: 41 ACKCNLHAKRCRFDMTLFILSGNVSGGICVNCKHNTAGRYCHYCKEGFYRNPKKPITHIK 100
Query: 94 AC 95
AC
Sbjct: 101 AC 102
>gi|432105649|gb|ELK31843.1| Netrin-1 [Myotis davidii]
Length = 344
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/49 (87%), Positives = 44/49 (89%)
Query: 48 MELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACK 96
MELYKLSGR SGGVCL CRH TAGRHCHYCKEGYYRD +PITHRKACK
Sbjct: 1 MELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACK 49
>gi|327280657|ref|XP_003225068.1| PREDICTED: LOW QUALITY PROTEIN: netrin-1-like [Anolis carolinensis]
Length = 582
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 54/74 (72%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R + +D C+CN H+ +CRF+MEL++LSGR SGG+CL CRH TAGRHC YC G+
Sbjct: 302 RATPKDAHECVACDCNLHSHRCRFSMELFELSGRRSGGICLNCRHHTAGRHCQYCHPGFK 361
Query: 83 RDPSRPITHRKACK 96
RD SRP+T KACK
Sbjct: 362 RDLSRPMTSNKACK 375
>gi|758787|gb|AAA87938.1| netrin-related laminin, partial [Mus musculus]
Length = 50
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 45/50 (90%)
Query: 47 NMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACK 96
NMELYKLSGR SGGVCL CRH TAGRHCHYCKEG+YRD +PITHRKACK
Sbjct: 1 NMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACK 50
>gi|47214072|emb|CAG00730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1018
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 52/63 (82%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C+CN H+ KCRF+ME+++ SGR SGGVCL+CRH TAGRHC YC++G+ RD S+P+ HR
Sbjct: 637 ACDCNGHSNKCRFSMEVFQQSGRHSGGVCLKCRHNTAGRHCQYCQKGFTRDHSKPLHHRA 696
Query: 94 ACK 96
AC+
Sbjct: 697 ACQ 699
>gi|334349209|ref|XP_001366580.2| PREDICTED: netrin-5-like [Monodelphis domestica]
Length = 342
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/62 (62%), Positives = 53/62 (85%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN HAR+CRF+ ++++LSG SGGVC +CRH TAGRHCHYC+ GY+RDP +P++ RKA
Sbjct: 78 CSCNLHARRCRFHADVFRLSGGRSGGVCERCRHHTAGRHCHYCERGYWRDPRQPLSSRKA 137
Query: 95 CK 96
C+
Sbjct: 138 CR 139
>gi|315488434|gb|ADU32852.1| netrin [Branchiostoma lanceolatum]
Length = 325
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 46/59 (77%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGY 81
R ++RD CNCN HAR+CRFNMELYKLSGR GGVCL CRH TAGRHCHYCK GY
Sbjct: 266 RATARDANECIACNCNLHARRCRFNMELYKLSGRKGGGVCLNCRHNTAGRHCHYCKSGY 324
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 17/78 (21%)
Query: 25 SSRDRIFFQT--------CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHY 76
+SRD ++ C CN HA KC + E G + C+H TAG C +
Sbjct: 204 ASRDSYYYAVSDFAVGGRCKCNGHASKCVHDRE---------GRLSCDCKHNTAGDECDH 254
Query: 77 CKEGYYRDPSRPITHRKA 94
CK +Y P + T R A
Sbjct: 255 CKPFHYDRPWQRATARDA 272
>gi|195999892|ref|XP_002109814.1| hypothetical protein TRIADDRAFT_53080 [Trichoplax adhaerens]
gi|190587938|gb|EDV27980.1| hypothetical protein TRIADDRAFT_53080 [Trichoplax adhaerens]
Length = 263
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%)
Query: 30 IFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPI 89
I F CNCN H+ KC F+ ++YKLSG SGGVC C H T GR+C+YCKEGYYRD ++PI
Sbjct: 26 ISFIPCNCNKHSNKCNFDKDVYKLSGGKSGGVCRDCNHNTDGRYCNYCKEGYYRDQTQPI 85
Query: 90 THRKACK 96
RKACK
Sbjct: 86 HSRKACK 92
>gi|348542588|ref|XP_003458766.1| PREDICTED: netrin-1-like [Oreochromis niloticus]
Length = 834
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 50/64 (78%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C CN H+ KCRF+ME+++ SGR SGGVC +CRH TAGRHC YC+ GY R+ +P++HRK
Sbjct: 491 ACECNGHSNKCRFSMEVFQQSGRRSGGVCQKCRHHTAGRHCQYCQNGYTRNHKKPLSHRK 550
Query: 94 ACKK 97
AC+
Sbjct: 551 ACQP 554
>gi|432920301|ref|XP_004079936.1| PREDICTED: netrin-1-like [Oryzias latipes]
Length = 895
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 50/64 (78%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C+CN H+ KCRF+ME++ SGR SGGVC +CRH TAGRHC YC+ GY RD ++ ++HRK
Sbjct: 523 ACDCNGHSNKCRFSMEVFLQSGRKSGGVCQKCRHNTAGRHCQYCQNGYARDHTKALSHRK 582
Query: 94 ACKK 97
AC+
Sbjct: 583 ACQP 586
>gi|326669313|ref|XP_001920036.2| PREDICTED: netrin-1-like [Danio rerio]
Length = 729
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H+ KCRF+M +Y+ SGR SGGVCL+CRH T GRHC +C+ GY RD S+ + HRKA
Sbjct: 329 CECNGHSNKCRFSMAVYQQSGRVSGGVCLKCRHHTTGRHCQFCQNGYMRDHSKALNHRKA 388
Query: 95 CKK 97
C+
Sbjct: 389 CQP 391
>gi|18148986|dbj|BAB83529.1| netrin 1 [Dugesia japonica]
Length = 325
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H++KC F+ +LY LS R SGGVC+ C H T GR+CH CK+GY+RD S+P++H+
Sbjct: 28 CNCNLHSKKCSFDEKLYILSNRQSGGVCVDCEHNTDGRYCHVCKKGYHRDWSKPLSHQHV 87
Query: 95 CKK 97
C K
Sbjct: 88 CLK 90
>gi|256079271|ref|XP_002575912.1| netrin [Schistosoma mansoni]
gi|360044862|emb|CCD82410.1| putative netrin [Schistosoma mansoni]
Length = 741
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R +++D + C+CN H+ +CRF+ LY LS R SGG+C C+H T GR+CH C EGYY
Sbjct: 388 RATTQDANVCKKCDCNLHSNECRFSNSLYLLSNRISGGICENCQHNTIGRNCHQCAEGYY 447
Query: 83 RDPSRPITHRKAC 95
RD ++PI+H C
Sbjct: 448 RDWTKPISHENVC 460
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 11/65 (16%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C S+G + C H T+G C YCK GY P T + A
Sbjct: 344 CKCNGHASECILG---------SNGKLICACEHHTSGEDCEYCKPGYMDRPWDRATTQDA 394
Query: 95 --CKK 97
CKK
Sbjct: 395 NVCKK 399
>gi|1850891|emb|CAA72188.1| netrin-1 [Rattus norvegicus]
Length = 63
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 44/55 (80%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYC 77
R ++R+ CNCN HAR+CRFNMELYKLSGR SGGVCL CRH TAGRHCHYC
Sbjct: 9 RATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYC 63
>gi|15706328|dbj|BAB68352.1| netrin [Ciona savignyi]
Length = 670
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRPITHR 92
CNCN HA++CRFN +L++ SGR SGGVC++CRH T GR+CH+CK GYYR + ++ I+ +
Sbjct: 413 ACNCNMHAKRCRFNHDLFEKSGRISGGVCVKCRHNTDGRYCHFCKAGYYRNNKTKSISDK 472
Query: 93 KACK 96
+ CK
Sbjct: 473 RTCK 476
>gi|62956007|gb|AAY23350.1| netrin 1 [Schmidtea mediterranea]
Length = 669
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H++KC FN +LY +S + SGGVC+ C H T GR+CH C +GY+RD S+P++H
Sbjct: 372 CNCNLHSKKCEFNEKLYIVSNKQSGGVCVDCEHNTDGRYCHQCNKGYHRDWSKPLSHHHV 431
Query: 95 CKK 97
C K
Sbjct: 432 CIK 434
>gi|344237751|gb|EGV93854.1| Netrin-1 [Cricetulus griseus]
Length = 252
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 39/49 (79%)
Query: 48 MELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACK 96
MELYKLSGR SGGVC C A RHCHYCKEG+YRD +PITHRKACK
Sbjct: 1 MELYKLSGRKSGGVCPTCPQNPAARHCHYCKEGFYRDMGKPITHRKACK 49
>gi|348513005|ref|XP_003444033.1| PREDICTED: netrin-4-like [Oreochromis niloticus]
Length = 638
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CN HAR C F+ L+ +GR SGGVC CRH T GRHC CK+G+YRDPSRP
Sbjct: 340 QKCKCNGHARSCHFSRGLWLATGRRSGGVCDDCRHNTEGRHCQSCKKGFYRDPSRPKMAP 399
Query: 93 KACK 96
+CK
Sbjct: 400 DSCK 403
>gi|358331590|dbj|GAA50375.1| netrin-1 [Clonorchis sinensis]
Length = 864
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 46/61 (75%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN H+ +CRF+ LY +S R SGGVC C+H TAGR+C +C EG+YRD ++PI+H A
Sbjct: 508 CDCNLHSSECRFSNALYLMSNRVSGGVCENCQHNTAGRNCQHCAEGFYRDWTKPISHEHA 567
Query: 95 C 95
C
Sbjct: 568 C 568
>gi|301607981|ref|XP_002933550.1| PREDICTED: laminin subunit beta-3 [Xenopus (Silurana) tropicalis]
Length = 1157
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNHA KC F+ +Y+ SGR SGGVC CR T GR+C C+ YYR+P++ ++HR A
Sbjct: 312 CNCNNHADKCHFDPAVYEASGRVSGGVCDNCRDGTTGRNCERCRSDYYRNPNKDMSHRDA 371
Query: 95 C 95
C
Sbjct: 372 C 372
>gi|134024218|gb|AAI36180.1| LOC100125073 protein [Xenopus (Silurana) tropicalis]
Length = 1033
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNHA KC F+ +Y+ SGR SGGVC CR T GR+C C+ YYR+P++ ++HR A
Sbjct: 312 CNCNNHADKCHFDPAVYEASGRVSGGVCDNCRDGTTGRNCERCRSDYYRNPNKDMSHRDA 371
Query: 95 C 95
C
Sbjct: 372 C 372
>gi|7544128|dbj|BAA94303.1| netrin [Ciona intestinalis]
Length = 600
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRPITHRK 93
CNCN HA++CRF+ +L++ SG +SGGVC++CRH T GR+CH CK G+YR + ++ +++R+
Sbjct: 393 CNCNMHAKRCRFSADLFEKSGGTSGGVCVKCRHNTHGRYCHKCKPGFYRNNKTKSMSNRR 452
Query: 94 ACKKV 98
AC+++
Sbjct: 453 ACRRI 457
>gi|313219667|emb|CBY30588.1| unnamed protein product [Oikopleura dioica]
Length = 604
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
CNCN H KC+FN L+K+SG SGG+C +CRH T+G C CK GY DP++ + K
Sbjct: 360 VCNCNLHTNKCKFNDSLFKMSGNQSGGMCQKCRHNTSGASCQVCKPGYTPDPNKSVDSPK 419
Query: 94 ACKKV 98
CKK+
Sbjct: 420 YCKKI 424
>gi|358340501|dbj|GAA48381.1| netrin-1 [Clonorchis sinensis]
Length = 807
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN H+ C F+ ++Y +S ++SGGVC C+H T GR CH+C GYYRD ++P++H +
Sbjct: 414 CDCNLHSLTCEFSQQIYLMSSKTSGGVCQNCQHNTVGRRCHHCASGYYRDWTKPVSHEQV 473
Query: 95 C 95
C
Sbjct: 474 C 474
>gi|344266496|ref|XP_003405316.1| PREDICTED: netrin-4-like [Loxodonta africana]
Length = 628
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA CRF+M +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCRFDMAVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACK 96
ACK
Sbjct: 390 DACK 393
>gi|74096165|ref|NP_001027598.1| netrin precursor [Ciona intestinalis]
gi|7544126|dbj|BAA94302.1| netrin [Ciona intestinalis]
Length = 650
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRPITHR 92
CNCN HA++CRF+ +L++ SG +SGGVC++CRH T GR+CH CK G+YR + ++ +++R
Sbjct: 392 ACNCNMHAKRCRFSADLFEKSGGTSGGVCVKCRHNTHGRYCHKCKPGFYRNNKTKSMSNR 451
Query: 93 KACK 96
+AC+
Sbjct: 452 RACR 455
>gi|148235429|ref|NP_001088164.1| laminin, beta 2 (laminin S) precursor [Xenopus laevis]
gi|54035234|gb|AAH84071.1| LOC494988 protein [Xenopus laevis]
Length = 1783
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNH+RKC F+M +Y +G SGGVC C H T GR+C +CK +Y+DPS+ I
Sbjct: 335 CNCNNHSRKCHFDMAVYLSTGNVSGGVCDDCVHNTMGRNCEFCKPFFYKDPSKDIRDSAV 394
Query: 95 CK 96
CK
Sbjct: 395 CK 396
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C CNN+ +M R SG CL+C+ T GR C +C+ G+Y D SR
Sbjct: 971 CQCNNN-----IDMTDIGACDRRSGQ-CLKCKFNTEGRFCEHCRIGFYGDASR 1017
>gi|194332619|ref|NP_001123798.1| uncharacterized protein LOC100170549 [Xenopus (Silurana)
tropicalis]
gi|189441913|gb|AAI67592.1| LOC100170549 protein [Xenopus (Silurana) tropicalis]
Length = 1853
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNH+RKC F+M +Y +G+ SGGVC C+H T GR+C CK YY+DP I A
Sbjct: 349 CNCNNHSRKCHFDMAVYLATGKESGGVCDDCQHNTMGRNCELCKPFYYQDPRADIRADNA 408
Query: 95 C 95
C
Sbjct: 409 C 409
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN H+ +C S G C++CR T GRHC C +GYY DP
Sbjct: 933 CVCNGHSDECD-----------SKTGACIRCRDSTTGRHCEKCLDGYYGDP 972
>gi|345326706|ref|XP_001509942.2| PREDICTED: netrin-4-like [Ornithorhynchus anatinus]
Length = 355
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++++++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 37 RTCKCNGHADTCHFDIDIWQASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRRPFSAP 96
Query: 93 KACKKV 98
ACK +
Sbjct: 97 DACKSI 102
>gi|432862991|ref|XP_004069973.1| PREDICTED: netrin-4-like [Oryzias latipes]
Length = 650
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 40/65 (61%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CN HA C F+ L+ +GR SGGVC QCRH T GR C CK GYYRD SRP
Sbjct: 352 QKCKCNGHASNCHFSRGLWMATGRRSGGVCDQCRHNTEGRRCQTCKRGYYRDASRPKNAA 411
Query: 93 KACKK 97
+CK
Sbjct: 412 DSCKP 416
>gi|355708161|gb|AES03182.1| netrin 4 [Mustela putorius furo]
Length = 620
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC+ C+H T G+HC CK G+YRD RP +
Sbjct: 323 RTCKCNGHADACHFDISVWEASGNRSGGVCIDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 382
Query: 93 KACK 96
ACK
Sbjct: 383 DACK 386
>gi|410965322|ref|XP_003989199.1| PREDICTED: LOW QUALITY PROTEIN: netrin-4 [Felis catus]
Length = 682
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++++++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 384 RTCKCNGHADACHFDIKVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 443
Query: 93 KACKK 97
ACKK
Sbjct: 444 DACKK 448
>gi|313232871|emb|CBY09554.1| unnamed protein product [Oikopleura dioica]
Length = 442
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
CNCN H KC+FN L+K+SG SGG+C +CRH T+G C CK GY DP++ + K
Sbjct: 360 VCNCNLHTNKCKFNDSLFKMSGNQSGGMCQKCRHNTSGASCQVCKPGYTPDPNKSVDSPK 419
Query: 94 ACK 96
CK
Sbjct: 420 YCK 422
>gi|339232570|ref|XP_003381402.1| netrin-1 [Trichinella spiralis]
gi|316979809|gb|EFV62544.1| netrin-1 [Trichinella spiralis]
Length = 124
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%)
Query: 48 MELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKK 97
MELY++S SGG+C+ CRH TAG HC YCKEGYYRD P+THR+ACK+
Sbjct: 1 MELYRMSNYKSGGMCINCRHNTAGVHCDYCKEGYYRDRKLPMTHRRACKR 50
>gi|444720735|gb|ELW61511.1| Netrin-4 [Tupaia chinensis]
Length = 682
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F+M +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 349 RTCKCNGHADTCHFDMTVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 408
Query: 93 KACK 96
ACK
Sbjct: 409 DACK 412
>gi|351712225|gb|EHB15144.1| Netrin-4 [Heterocephalus glaber]
Length = 672
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 41/64 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ ++ SG SGGVC CRH T G+HC CK G+YRD RP +
Sbjct: 374 RTCKCNGHADTCHFDINVWAASGNRSGGVCSNCRHNTEGQHCQRCKPGFYRDLRRPFSAP 433
Query: 93 KACK 96
ACK
Sbjct: 434 DACK 437
>gi|291389753|ref|XP_002711255.1| PREDICTED: laminin B1-like [Oryctolagus cuniculus]
Length = 625
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 327 RTCKCNGHAEACHFDINVWEASGNRSGGVCANCQHNTEGQHCQRCKPGFYRDLRRPFSAP 386
Query: 93 KACK 96
ACK
Sbjct: 387 DACK 390
>gi|91095063|ref|XP_972560.1| PREDICTED: similar to AGAP001381-PA [Tribolium castaneum]
Length = 1759
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 40/62 (64%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNHA C F+ LY+ +GR SGGVC C+H T G +C CK YYRDP R I +
Sbjct: 334 CNCNNHATSCHFDAALYEATGRISGGVCDGCQHNTMGPNCEQCKPFYYRDPQRDIQDPEV 393
Query: 95 CK 96
C+
Sbjct: 394 CR 395
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C+CN HA C S G C+ C+ T G +C C +G+Y DP
Sbjct: 857 QRCDCNGHADICD-----------SKTGACINCKDNTEGHNCEQCVDGFYGDP 898
>gi|313214934|emb|CBY41146.1| unnamed protein product [Oikopleura dioica]
Length = 509
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ CNCN H KC+FN L+K+SG SGG+C +CRH T+G C CK GY DP++ +
Sbjct: 215 RVCNCNLHTNKCKFNDSLFKMSGNQSGGMCQKCRHNTSGASCQVCKPGYTPDPNKSVDSP 274
Query: 93 KACK 96
K CK
Sbjct: 275 KYCK 278
>gi|431839378|gb|ELK01304.1| Laminin subunit beta-4, partial [Pteropus alecto]
Length = 1235
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 31 FFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT 90
+ Q C+CN H+ +C F+M +Y SG SGGVC CRH T G HC C+ +YRDP + I+
Sbjct: 134 YIQACSCNGHSDRCHFDMNVYLASGGVSGGVCEDCRHNTEGPHCDRCRPLFYRDPLKAIS 193
Query: 91 HRKAC 95
AC
Sbjct: 194 DPYAC 198
>gi|301607003|ref|XP_002933101.1| PREDICTED: laminin subunit beta-2-like [Xenopus (Silurana)
tropicalis]
Length = 1783
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 41/62 (66%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNH+RKC F+M +Y +G SGGVC C H T GR+C CK +Y+DPS+ +
Sbjct: 335 CNCNNHSRKCHFDMAVYLSTGNVSGGVCDDCVHNTMGRNCELCKPFFYKDPSKDLRDSAV 394
Query: 95 CK 96
CK
Sbjct: 395 CK 396
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Query: 35 CNCNNHARKCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C CNN N+++ + G G CL+C++ T GR C +C+ G+Y D SR
Sbjct: 971 CQCNN-------NIDMTDIGGCDRRSGQCLKCKYNTEGRFCEHCRIGFYGDASR 1017
>gi|301617718|ref|XP_002938270.1| PREDICTED: netrin-4-like [Xenopus (Silurana) tropicalis]
Length = 643
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+NHA C F++ ++ SGR+SGGVC C+H T G C C+ GYYRDP P+ A
Sbjct: 336 CRCHNHAHSCHFDLSVWLSSGRTSGGVCENCQHHTEGDRCQRCQPGYYRDPKEPMASPAA 395
Query: 95 CKK 97
CK+
Sbjct: 396 CKE 398
>gi|432111873|gb|ELK34915.1| Netrin-4 [Myotis davidii]
Length = 625
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 230 TCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPD 289
Query: 94 ACK 96
ACK
Sbjct: 290 ACK 292
>gi|296212618|ref|XP_002752923.1| PREDICTED: netrin-4 isoform 2 [Callithrix jacchus]
Length = 602
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 327 RTCKCNGHAETCHFDVHVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 386
Query: 93 KACKK 97
ACK
Sbjct: 387 DACKP 391
>gi|426373741|ref|XP_004053748.1| PREDICTED: netrin-4 isoform 3 [Gorilla gorilla gorilla]
Length = 605
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDVNMWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|426373737|ref|XP_004053746.1| PREDICTED: netrin-4 isoform 1 [Gorilla gorilla gorilla]
Length = 628
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDVNMWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|296212620|ref|XP_002752924.1| PREDICTED: netrin-4 isoform 3 [Callithrix jacchus]
Length = 591
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 293 RTCKCNGHAETCHFDVHVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 352
Query: 93 KACKK 97
ACK
Sbjct: 353 DACKP 357
>gi|426373739|ref|XP_004053747.1| PREDICTED: netrin-4 isoform 2 [Gorilla gorilla gorilla]
Length = 591
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 293 RTCKCNGHADTCHFDVNMWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 352
Query: 93 KACKK 97
ACK
Sbjct: 353 DACKP 357
>gi|345781074|ref|XP_003432078.1| PREDICTED: netrin-4 isoform 2 [Canis lupus familiaris]
Length = 605
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACK 96
ACK
Sbjct: 390 DACK 393
>gi|327272690|ref|XP_003221117.1| PREDICTED: netrin-4-like [Anolis carolinensis]
Length = 629
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C CN H+ C F+M+ + SG SGGVC C+H T G+HC CK GYYRD RP +
Sbjct: 356 SCKCNGHSDTCHFDMDTWLASGNQSGGVCDNCQHNTEGQHCQRCKPGYYRDLRRPFSAPD 415
Query: 94 ACK 96
ACK
Sbjct: 416 ACK 418
>gi|350584654|ref|XP_003481795.1| PREDICTED: netrin-4-like [Sus scrofa]
Length = 628
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACK 96
ACK
Sbjct: 390 DACK 393
>gi|296212616|ref|XP_002752922.1| PREDICTED: netrin-4 isoform 1 [Callithrix jacchus]
Length = 625
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 327 RTCKCNGHAETCHFDVHVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 386
Query: 93 KACKK 97
ACK
Sbjct: 387 DACKP 391
>gi|194226672|ref|XP_001915979.1| PREDICTED: netrin-4-like [Equus caballus]
Length = 633
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 332 RTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 391
Query: 93 KACK 96
ACK
Sbjct: 392 DACK 395
>gi|395820051|ref|XP_003783391.1| PREDICTED: netrin-4 isoform 2 [Otolemur garnettii]
Length = 591
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 293 RTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 352
Query: 93 KACK 96
ACK
Sbjct: 353 DACK 356
>gi|324500023|gb|ADY40025.1| Laminin subunit beta-1 [Ascaris suum]
Length = 1790
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA +C F+ +Y+ SG SGGVC +C H T G++C CK YYR+P RPIT
Sbjct: 343 CNCNGHAARCHFDRAVYQASGFVSGGVCDECMHNTQGKNCEQCKPFYYRNPQRPITDPYV 402
Query: 95 C 95
C
Sbjct: 403 C 403
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN+HA C G C++CR T G +C CK+GYY DP
Sbjct: 870 VCQCNDHASICD-----------QKTGACIECRDLTDGYYCDRCKDGYYGDP 910
>gi|395820049|ref|XP_003783390.1| PREDICTED: netrin-4 isoform 1 [Otolemur garnettii]
Length = 628
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACK 96
ACK
Sbjct: 390 DACK 393
>gi|345781072|ref|XP_003432077.1| PREDICTED: netrin-4 isoform 1 [Canis lupus familiaris]
Length = 591
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 293 RTCKCNGHADTCHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 352
Query: 93 KACK 96
ACK
Sbjct: 353 DACK 356
>gi|73978205|ref|XP_532655.2| PREDICTED: netrin-4 isoform 3 [Canis lupus familiaris]
Length = 628
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACK 96
ACK
Sbjct: 390 DACK 393
>gi|380797183|gb|AFE70467.1| netrin-4 precursor, partial [Macaca mulatta]
Length = 612
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 314 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 373
Query: 93 KACKK 97
ACK
Sbjct: 374 DACKP 378
>gi|388453233|ref|NP_001252984.1| netrin-4 precursor [Macaca mulatta]
gi|384948586|gb|AFI37898.1| netrin-4 precursor [Macaca mulatta]
Length = 628
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|197097358|ref|NP_001125560.1| netrin-4 precursor [Pongo abelii]
gi|75041990|sp|Q5RB89.1|NET4_PONAB RecName: Full=Netrin-4; Flags: Precursor
gi|55728456|emb|CAH90971.1| hypothetical protein [Pongo abelii]
Length = 628
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|402887298|ref|XP_003907033.1| PREDICTED: netrin-4-like, partial [Papio anubis]
Length = 514
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|157817109|ref|NP_001100250.1| netrin-4 precursor [Rattus norvegicus]
gi|149067173|gb|EDM16906.1| rCG48694 [Rattus norvegicus]
Length = 630
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACK 96
ACK
Sbjct: 390 DACK 393
>gi|410305714|gb|JAA31457.1| netrin 4 [Pan troglodytes]
Length = 628
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|410218490|gb|JAA06464.1| netrin 4 [Pan troglodytes]
gi|410263298|gb|JAA19615.1| netrin 4 [Pan troglodytes]
gi|410342893|gb|JAA40393.1| netrin 4 [Pan troglodytes]
Length = 628
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|431913412|gb|ELK15087.1| Laminin subunit beta-2 [Pteropus alecto]
Length = 1767
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC +C+H TAGRHC C+ +YRDP++ +
Sbjct: 348 KKCECHGHTHSCHFDMAIYLASGNVSGGVCDECQHNTAGRHCELCRPFFYRDPTKDLRDP 407
Query: 93 KACK 96
C+
Sbjct: 408 AVCR 411
>gi|332840087|ref|XP_003313918.1| PREDICTED: netrin-4 isoform 1 [Pan troglodytes]
Length = 591
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 293 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 352
Query: 93 KACKK 97
ACK
Sbjct: 353 DACKP 357
>gi|332221166|ref|XP_003259732.1| PREDICTED: netrin-4 isoform 1 [Nomascus leucogenys]
gi|441626862|ref|XP_004089194.1| PREDICTED: netrin-4 isoform 2 [Nomascus leucogenys]
Length = 591
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 293 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 352
Query: 93 KACKK 97
ACK
Sbjct: 353 DACKP 357
>gi|449474133|ref|XP_004176995.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-2
[Taeniopygia guttata]
Length = 1698
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%)
Query: 31 FFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT 90
F C+CN H+R+C F+M +Y +G +SG VC C+H T GRHCH CK YYR P I
Sbjct: 8 FLLGCDCNEHSRRCHFDMAVYLATGNTSGAVCDDCQHNTMGRHCHLCKPFYYRHPRSDIR 67
Query: 91 HRKAC 95
AC
Sbjct: 68 SPTAC 72
>gi|355564586|gb|EHH21086.1| Beta-netrin, partial [Macaca mulatta]
gi|355786422|gb|EHH66605.1| Beta-netrin, partial [Macaca fascicularis]
Length = 616
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 318 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 377
Query: 93 KACKK 97
ACK
Sbjct: 378 DACKP 382
>gi|226442874|ref|NP_067295.2| netrin-4 precursor [Mus musculus]
gi|341941169|sp|Q9JI33.2|NET4_MOUSE RecName: Full=Netrin-4; AltName: Full=Beta-netrin; Flags: Precursor
Length = 628
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACK 96
ACK
Sbjct: 390 DACK 393
>gi|9652103|gb|AAF91404.1|AF268066_1 netrin 4 [Mus musculus]
gi|11120055|gb|AAG30823.1|AF281278_1 beta netrin [Mus musculus]
gi|111600048|gb|AAI19183.1| Netrin 4 [Mus musculus]
gi|111601161|gb|AAI19185.1| Netrin 4 [Mus musculus]
gi|148689616|gb|EDL21563.1| netrin 4 [Mus musculus]
Length = 628
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACK 96
ACK
Sbjct: 390 DACK 393
>gi|55729448|emb|CAH91455.1| hypothetical protein [Pongo abelii]
Length = 482
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 184 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 243
Query: 93 KACK 96
ACK
Sbjct: 244 DACK 247
>gi|410908449|ref|XP_003967703.1| PREDICTED: netrin-4-like [Takifugu rubripes]
Length = 641
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CN AR C F+ L+ +GR SGGVC CRH T GRHC C++G++RDP P T
Sbjct: 325 QKCKCNGLARSCHFSRGLWLATGRRSGGVCDDCRHNTEGRHCQNCRKGFFRDPGLPKTSP 384
Query: 93 KACKK 97
+CK
Sbjct: 385 DSCKP 389
>gi|403275843|ref|XP_003929633.1| PREDICTED: netrin-4 [Saimiri boliviensis boliviensis]
Length = 591
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 293 RTCKCNGHADTCHFDVHVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 352
Query: 93 KACK 96
ACK
Sbjct: 353 DACK 356
>gi|397473606|ref|XP_003808298.1| PREDICTED: netrin-4 isoform 3 [Pan paniscus]
Length = 605
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGG+C C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDINVWEASGNRSGGICDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|156379641|ref|XP_001631565.1| predicted protein [Nematostella vectensis]
gi|156218607|gb|EDO39502.1| predicted protein [Nematostella vectensis]
Length = 1759
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA KCRF+ +Y+ SG SGGVC C H T GR+C CK +Y+DPS+ + A
Sbjct: 320 CNCNGHAVKCRFDPAVYQASGNVSGGVCQDCEHNTVGRNCERCKPLHYQDPSKKFSDPDA 379
Query: 95 C 95
C
Sbjct: 380 C 380
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 17 EHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHY 76
E +K+ + D + +C+C HA +C G G C H T G++C
Sbjct: 239 EIKRKYYYAVYDLVIRGSCSCYGHAEQCLPEPGQPTTPGMVYGRC--NCTHNTTGKNCER 296
Query: 77 CKEGYYRDPSRP 88
C++GY+ P RP
Sbjct: 297 CQDGYFDVPWRP 308
>gi|326911707|ref|XP_003202197.1| PREDICTED: LOW QUALITY PROTEIN: netrin-4-like, partial [Meleagris
gallopavo]
Length = 608
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 41/65 (63%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q+C CN HA C F+M+ + SG SGGVC C+H T G+HC CK G+YRD +P +
Sbjct: 309 QSCKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAP 368
Query: 93 KACKK 97
ACK
Sbjct: 369 DACKP 373
>gi|397473602|ref|XP_003808296.1| PREDICTED: netrin-4 isoform 1 [Pan paniscus]
Length = 628
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGG+C C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDINVWEASGNRSGGICDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|118082521|ref|XP_416155.2| PREDICTED: netrin-4 [Gallus gallus]
Length = 778
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 41/65 (63%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q+C CN HA C F+M+ + SG SGGVC C+H T G+HC CK G+YRD +P +
Sbjct: 480 QSCKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAP 539
Query: 93 KACKK 97
ACK
Sbjct: 540 DACKP 544
>gi|397473604|ref|XP_003808297.1| PREDICTED: netrin-4 isoform 2 [Pan paniscus]
Length = 591
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGG+C C+H T G+HC CK G+YRD RP +
Sbjct: 293 RTCKCNGHADTCHFDINVWEASGNRSGGICDDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 352
Query: 93 KACKK 97
ACK
Sbjct: 353 DACKP 357
>gi|449666107|ref|XP_002168125.2| PREDICTED: laminin subunit beta-1-like [Hydra magnipapillata]
Length = 1818
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 22 FRCSSRDRIFF-QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEG 80
++ S +D++ + CNCN H+ KC F++ +Y +G++SGGVC C+H T GR C CK
Sbjct: 326 WQPSYKDKLSVCKKCNCNGHSDKCHFDIAVYNANGKTSGGVCDDCQHNTHGRQCEQCKPL 385
Query: 81 YYRDPSRPITHRKACKK 97
YYRDP + I CK+
Sbjct: 386 YYRDPFKNIFDPDVCKQ 402
>gi|395538235|ref|XP_003771090.1| PREDICTED: netrin-4 [Sarcophilus harrisii]
Length = 619
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F+ ++++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 321 RTCKCNGHADTCHFDKDVWRASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRRPFSAP 380
Query: 93 KACK 96
ACK
Sbjct: 381 DACK 384
>gi|431905319|gb|ELK10364.1| Netrin-4 [Pteropus alecto]
Length = 627
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG +GGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADACHFDINVWEASGNRTGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACK 96
ACK
Sbjct: 390 DACK 393
>gi|344252282|gb|EGW08386.1| Netrin-4 [Cricetulus griseus]
Length = 574
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 299 RTCKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKLGFYRDLRRPFSAP 358
Query: 93 KACK 96
ACK
Sbjct: 359 DACK 362
>gi|281340395|gb|EFB15979.1| hypothetical protein PANDA_007903 [Ailuropoda melanoleuca]
Length = 610
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 312 RTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 371
Query: 93 KACK 96
AC+
Sbjct: 372 DACR 375
>gi|354478529|ref|XP_003501467.1| PREDICTED: netrin-4 [Cricetulus griseus]
Length = 627
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 329 RTCKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKLGFYRDLRRPFSAP 388
Query: 93 KACK 96
ACK
Sbjct: 389 DACK 392
>gi|301767738|ref|XP_002919283.1| PREDICTED: netrin-4-like [Ailuropoda melanoleuca]
Length = 627
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 330 RTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACK 96
AC+
Sbjct: 390 DACR 393
>gi|449271698|gb|EMC81982.1| Laminin subunit beta-3, partial [Columba livia]
Length = 207
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q CNCN H+ C F+ ELY+ SG +SGGVC C+H T G +C CK Y+R+P + +TH
Sbjct: 40 QRCNCNGHSASCHFDPELYRASGGASGGVCDSCQHNTEGNNCERCKTNYFRNPRQDLTHP 99
Query: 93 KAC 95
+AC
Sbjct: 100 EAC 102
>gi|45383784|ref|NP_989497.1| laminin subunit beta-2 precursor [Gallus gallus]
gi|2708707|gb|AAB92586.1| laminin beta 2-like chain [Gallus gallus]
Length = 1792
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN H+R+C F+M ++ +G +SG VC C+H T GRHCH CK YY+DPS+ +
Sbjct: 347 CDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRHCHLCKPFYYKDPSKDLRDPTV 406
Query: 95 CK 96
C+
Sbjct: 407 CR 408
>gi|312379797|gb|EFR25965.1| hypothetical protein AND_08260 [Anopheles darlingi]
Length = 1415
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 38/62 (61%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNHA C F+ +Y+ SGR SGGVC C+H T G HC C YYRDP+ I
Sbjct: 329 CNCNNHATSCHFDQAVYEHSGRVSGGVCDNCQHNTQGYHCEECAPFYYRDPNEDIQSPYV 388
Query: 95 CK 96
CK
Sbjct: 389 CK 390
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 10/57 (17%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR--SSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
Q C CNN N++L K SG S G C QC + T G HC YC++GYY D R
Sbjct: 961 QECECNN-------NVDL-KRSGNCDSRTGKCQQCLYNTEGDHCEYCRDGYYGDAFR 1009
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN H C S G C+QC+ FT G C C +GYY +P
Sbjct: 852 QICECNGHTPTCD-----------SKTGECVQCQDFTQGWKCDRCLDGYYGNP 893
>gi|380022480|ref|XP_003695073.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-1-like [Apis
florea]
Length = 1773
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNH C F+ +Y+ SGR SGGVC C+H T G++C CK YY D ++ I+H +A
Sbjct: 339 CNCNNHTNSCHFDETVYERSGRVSGGVCDDCQHNTRGQNCELCKPFYYHDVTKDISHSEA 398
Query: 95 C 95
C
Sbjct: 399 C 399
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G C+ CR +T G +C C E YY DP
Sbjct: 865 QRCECNGHAESCD-----------SKTGACINCRDYTTGHNCDRCIETYYGDP 906
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 10/52 (19%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR--SSGGVCLQCRHFTAGRHCHYCKEGYY 82
++CNCNN N +L +L+G G CLQC + T G +C CK G+Y
Sbjct: 974 ESCNCNN-------NTDL-RLAGNCDPHTGRCLQCLYNTDGSNCQICKPGFY 1017
>gi|432092400|gb|ELK25015.1| Laminin subunit beta-2 [Myotis davidii]
Length = 1999
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H R C F+M +Y SG SGGVC C+H TAG HC C+ +YRDP++ +
Sbjct: 404 KKCECHGHTRSCHFDMAVYLASGNVSGGVCDGCQHNTAGHHCELCRPFFYRDPAKDLRDP 463
Query: 93 KACK 96
AC+
Sbjct: 464 AACR 467
>gi|327266246|ref|XP_003217917.1| PREDICTED: laminin subunit beta-1-like [Anolis carolinensis]
Length = 1827
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+M +Y +G +SGGVC +C H T GRHC CK YYR+P I A
Sbjct: 322 CNCNEHSHRCHFDMAVYLATGNTSGGVCDECLHNTMGRHCQLCKPFYYRNPMADIRASTA 381
Query: 95 C 95
C
Sbjct: 382 C 382
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C+CN H+ +C + G C CR +TAGRHC C +GYY DP
Sbjct: 905 CHCNGHSEECDLHT-----------GACHDCRDYTAGRHCERCLDGYYGDP 944
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L+K+ + + + +C C HA +C + L G C+ C+H T G +C CK
Sbjct: 242 LQKYYYAVYELVLRGSCFCYGHASECAPLAGVTNLVEGMIHGRCV-CKHHTKGLNCELCK 300
Query: 79 EGYYRDPSRP 88
+ Y P RP
Sbjct: 301 DFYQELPWRP 310
>gi|119617951|gb|EAW97545.1| netrin 4, isoform CRA_b [Homo sapiens]
Length = 605
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G++C CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|327266244|ref|XP_003217916.1| PREDICTED: laminin subunit beta-2-like [Anolis carolinensis]
Length = 1719
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+M +Y +G +SGGVC +C+H T GR+C CK YY+DP++ I
Sbjct: 394 CNCNEHSYRCHFDMAVYLATGNTSGGVCDECQHNTMGRNCQLCKPFYYKDPTKDIRDPNV 453
Query: 95 CKKV 98
C +
Sbjct: 454 CHGI 457
>gi|395516696|ref|XP_003762523.1| PREDICTED: netrin-4-like [Sarcophilus harrisii]
Length = 638
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+NHA C F+ +++ SG+ GG+C CRH T GRHC CK G+YRD S+P++ +
Sbjct: 333 CRCHNHADSCHFDEDVWLSSGKRRGGICDNCRHHTEGRHCQKCKSGFYRDWSKPMSSPEV 392
Query: 95 CKK 97
CK
Sbjct: 393 CKP 395
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 28 DRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
D I +C CN H CR E+ S G C+ CRH TAG HC C Y P +
Sbjct: 261 DLIVRGSCFCNGHGEMCRPVDEMGD-SRNKVHGACV-CRHHTAGLHCEKCLPLYNDQPWK 318
Query: 88 P 88
P
Sbjct: 319 P 319
>gi|395539197|ref|XP_003771559.1| PREDICTED: laminin subunit beta-4 [Sarcophilus harrisii]
Length = 1752
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+CNCN H+ +C F+M LY S SGGVC C+H T G+HC CK +YRDP + I+
Sbjct: 329 SCNCNGHSERCHFDMSLYLSSNSVSGGVCEDCQHNTMGQHCDQCKPLFYRDPFKEISDPH 388
Query: 94 AC 95
AC
Sbjct: 389 AC 390
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN A C G C CR FTAG HC C +GYY +P
Sbjct: 857 CPCNGFAELCD-----------PETGSCFNCRGFTAGLHCERCIDGYYGNP 896
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 17 EHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGV---CLQCRHFTAGRH 73
+ L K+ + D + C CN HA KC ++ G V C+ C+H T G +
Sbjct: 245 DPLDKYYYALYDMVVRGRCFCNGHANKCGPTQDVRGDVFSPPGMVHGHCI-CQHNTDGPN 303
Query: 74 CHYCKEGYYRDPSRP 88
C CKE ++ P RP
Sbjct: 304 CERCKEFFHDVPWRP 318
>gi|93204871|ref|NP_067052.2| netrin-4 precursor [Homo sapiens]
gi|76789662|sp|Q9HB63.2|NET4_HUMAN RecName: Full=Netrin-4; AltName: Full=Beta-netrin; AltName:
Full=Hepar-derived netrin-like protein; Flags: Precursor
gi|12407829|gb|AAG53651.1|AF297711_1 netrin 4 precursor [Homo sapiens]
gi|119617950|gb|EAW97544.1| netrin 4, isoform CRA_a [Homo sapiens]
gi|168277682|dbj|BAG10819.1| netrin-4 precursor [synthetic construct]
gi|187951539|gb|AAI36799.1| Netrin 4 [Homo sapiens]
gi|187953351|gb|AAI36800.1| Netrin 4 [Homo sapiens]
Length = 628
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G++C CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|347965786|ref|XP_321757.5| AGAP001381-PA [Anopheles gambiae str. PEST]
gi|333470353|gb|EAA01110.5| AGAP001381-PA [Anopheles gambiae str. PEST]
Length = 1893
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 38/62 (61%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNHA C F+ +Y+ SGR SGGVC C+H T G HC C +YRDP+ I
Sbjct: 458 CNCNNHATSCHFDQAVYEHSGRVSGGVCDNCQHNTQGYHCEECAPFFYRDPNEDIQSPYV 517
Query: 95 CK 96
CK
Sbjct: 518 CK 519
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
Q+C+C+N+ R + S G CLQC + T G HC YC++G+Y D R
Sbjct: 1095 QSCDCSNNVDPKRPG------NCDSKSGKCLQCLYNTEGDHCEYCRDGFYGDALR 1143
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN H C S G CL C+ FT G C C +GYY +P
Sbjct: 986 QICECNGHTPTCN-----------SKTGECLHCQDFTQGWKCDRCVDGYYGNP 1027
>gi|189055156|dbj|BAG38140.1| unnamed protein product [Homo sapiens]
Length = 628
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G++C CK G+YRD RP +
Sbjct: 330 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|156121053|ref|NP_001095673.1| netrin-4 precursor [Bos taurus]
gi|154426108|gb|AAI51287.1| NTN4 protein [Bos taurus]
gi|296487433|tpg|DAA29546.1| TPA: netrin 4 [Bos taurus]
Length = 627
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+Y D RP +
Sbjct: 330 RTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAP 389
Query: 93 KACK 96
ACK
Sbjct: 390 DACK 393
>gi|426225037|ref|XP_004006674.1| PREDICTED: netrin-4 isoform 1 [Ovis aries]
Length = 628
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+Y D RP +
Sbjct: 330 RTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAP 389
Query: 93 KACK 96
ACK
Sbjct: 390 DACK 393
>gi|52545838|emb|CAH56243.1| hypothetical protein [Homo sapiens]
Length = 579
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G++C CK G+YRD RP +
Sbjct: 281 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAP 340
Query: 93 KACKK 97
ACK
Sbjct: 341 DACKP 345
>gi|33112679|gb|AAF69670.2|AF119917_78 hepar-derived netrin-like protein [Homo sapiens]
Length = 591
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G++C CK G+YRD RP +
Sbjct: 293 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAP 352
Query: 93 KACKK 97
ACK
Sbjct: 353 DACKP 357
>gi|440903908|gb|ELR54498.1| Netrin-4 [Bos grunniens mutus]
Length = 628
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+Y D RP +
Sbjct: 330 RTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAP 389
Query: 93 KACK 96
ACK
Sbjct: 390 DACK 393
>gi|383862551|ref|XP_003706747.1| PREDICTED: laminin subunit beta-1-like, partial [Megachile
rotundata]
Length = 753
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNH+ C F+ +Y+ SGR SGGVC C+H T GR+C CK YY D ++ I+H +A
Sbjct: 321 CNCNNHSTSCHFDDLVYEQSGRVSGGVCNNCQHNTEGRNCELCKLFYYHDVTKDISHPEA 380
Query: 95 C 95
C
Sbjct: 381 C 381
>gi|158254614|dbj|BAF83280.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G++C CK G+YRD RP +
Sbjct: 293 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAP 352
Query: 93 KACKK 97
ACK
Sbjct: 353 DACKP 357
>gi|426225039|ref|XP_004006675.1| PREDICTED: netrin-4 isoform 2 [Ovis aries]
Length = 591
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+Y D RP +
Sbjct: 293 RTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAP 352
Query: 93 KACK 96
ACK
Sbjct: 353 DACK 356
>gi|149018527|gb|EDL77168.1| laminin, beta 2 [Rattus norvegicus]
Length = 1801
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C CN H+ C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 348 RKCECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDP 407
Query: 93 KACK 96
AC+
Sbjct: 408 AACR 411
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 1008 GQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTC 1043
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN A +C + G CL CR +T G HC C G++ DP P
Sbjct: 880 CVCNGRADECD-----------AHTGACLGCRDYTGGEHCERCIAGFHGDPRLP 922
>gi|6981142|ref|NP_037106.1| laminin subunit beta-2 precursor [Rattus norvegicus]
gi|126371|sp|P15800.1|LAMB2_RAT RecName: Full=Laminin subunit beta-2; AltName: Full=Laminin chain
B3; AltName: Full=Laminin-11 subunit beta; AltName:
Full=Laminin-14 subunit beta; AltName: Full=Laminin-15
subunit beta; AltName: Full=Laminin-3 subunit beta;
AltName: Full=Laminin-4 subunit beta; AltName:
Full=Laminin-7 subunit beta; AltName: Full=Laminin-9
subunit beta; AltName: Full=S-laminin subunit beta;
Short=S-LAM beta; Flags: Precursor
gi|57251|emb|CAA34561.1| precursor (AA -35 to 1766) [Rattus norvegicus]
Length = 1801
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C CN H+ C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 348 RKCECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDP 407
Query: 93 KACK 96
AC+
Sbjct: 408 AACR 411
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 1008 GQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTC 1043
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN A +C + G CL CR +T G HC C G++ DP P
Sbjct: 880 CVCNGRADECD-----------AHTGACLGCRDYTGGEHCERCIAGFHGDPRLP 922
>gi|226290|prf||1505373A laminin-like adhesive protein
Length = 1801
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C CN H+ C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 348 RKCECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDP 407
Query: 93 KACK 96
AC+
Sbjct: 408 AACR 411
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 1008 GQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTC 1043
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN A +C + G CL CR +T G HC C G++ DP P
Sbjct: 880 CVCNGRADECD-----------AHTGACLGCRDYTGGEHCERCIAGFHGDPRLP 922
>gi|350588944|ref|XP_003482749.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-4-like [Sus
scrofa]
Length = 1744
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 40/62 (64%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C+CN+H+ C FNM Y SG SGGVC CRH T G+HC C+ +YRDP +PI+
Sbjct: 331 ACHCNSHSDHCHFNMTTYLASGGHSGGVCDGCRHNTEGQHCDRCRPLFYRDPLKPISDPH 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
G C C FT GR+C C +GYY +PS ++ R
Sbjct: 877 GSCFNCGGFTTGRNCERCIDGYYGNPSSGLSCRP 910
>gi|62914008|gb|AAH13591.2| NTN4 protein, partial [Homo sapiens]
Length = 469
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G++C CK G+YRD RP +
Sbjct: 171 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAP 230
Query: 93 KACKK 97
ACK
Sbjct: 231 DACKP 235
>gi|348580327|ref|XP_003475930.1| PREDICTED: netrin-4-like [Cavia porcellus]
Length = 633
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC C+ HA C F++ ++ SG SGGVC C+H T G+HC CK G+YRD RP +
Sbjct: 335 RTCKCSGHADTCHFDINVWTASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAP 394
Query: 93 KACK 96
ACK
Sbjct: 395 DACK 398
>gi|10437037|dbj|BAB14964.1| unnamed protein product [Homo sapiens]
Length = 341
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G++C CK G+YRD RP +
Sbjct: 43 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAP 102
Query: 93 KACK 96
ACK
Sbjct: 103 DACK 106
>gi|395528844|ref|XP_003766534.1| PREDICTED: uncharacterized protein LOC100932361 [Sarcophilus
harrisii]
Length = 841
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 59 GGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACK 96
GGVC +CRH TAGRHCHYC+ GY+RDP +P++ R+AC+
Sbjct: 575 GGVCERCRHHTAGRHCHYCERGYWRDPPQPLSSRRACR 612
>gi|326927992|ref|XP_003210170.1| PREDICTED: netrin-4-like [Meleagris gallopavo]
Length = 638
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+NHA C F++ ++ SG+ SGGVC C+H T G CH CK GYYRD +P++ +
Sbjct: 335 CRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCHRCKPGYYRDRGKPMSSAEV 394
Query: 95 CKK 97
CK
Sbjct: 395 CKP 397
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 28 DRIFFQTCNCNNHARKCRFNMELYKLSGRSSG---GVCLQCRHFTAGRHCHYCKEGYYRD 84
D I +C CN HA +C EL +G G C+ C H TAG HC C Y
Sbjct: 263 DLIIRGSCFCNGHAEEC----ELANRTGEVENVVHGKCV-CSHNTAGDHCEKCAPLYNDQ 317
Query: 85 PSRP 88
P +P
Sbjct: 318 PWKP 321
>gi|260800033|ref|XP_002594941.1| hypothetical protein BRAFLDRAFT_244565 [Branchiostoma floridae]
gi|229280179|gb|EEN50952.1| hypothetical protein BRAFLDRAFT_244565 [Branchiostoma floridae]
Length = 598
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C CN+HA C F++ +++ + +GGVC C+H T GR CH C+ GYY+DP+R H
Sbjct: 318 EKCECNSHADSCHFDLNVWRATNGKTGGVCDDCQHNTMGRRCHRCRPGYYQDPTRDKAHP 377
Query: 93 KACKK 97
+ CK+
Sbjct: 378 QICKR 382
>gi|68161843|emb|CAB70800.3| hypothetical protein [Homo sapiens]
Length = 400
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G++C CK G+YRD RP +
Sbjct: 102 RTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAP 161
Query: 93 KACKK 97
ACK
Sbjct: 162 DACKP 166
>gi|47213438|emb|CAF89545.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3652
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN H+ KC F+M +Y + +SGGVC C H T GR+C CK YY+DPSR I +
Sbjct: 1436 CDCNGHSDKCHFDMAVYLATANTSGGVCDDCSHHTTGRNCELCKPFYYQDPSRDIRDQHV 1495
Query: 95 C 95
C
Sbjct: 1496 C 1496
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 32/51 (62%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
CNC+ HA C F+M +Y SG SGGVC C+H T G C CK YYRDP
Sbjct: 3461 CNCHGHAHTCHFDMAVYLASGNVSGGVCDHCQHNTMGHACDMCKPFYYRDP 3511
>gi|444510630|gb|ELV09652.1| Laminin subunit beta-2 [Tupaia chinensis]
Length = 3008
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ HA C F+M Y SG SGGVC C+H TAGRHC C+ +YRDP++
Sbjct: 348 RKCECHGHAHSCHFDMAAYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDPRDP 407
Query: 93 KACK 96
C+
Sbjct: 408 AVCR 411
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT--HR 92
C C HA +C + G C+ C+H T G +C C++ Y+ P P H
Sbjct: 286 CFCYGHASQCAPAPGAPAHAEGMVHGACV-CKHNTRGLNCEQCQDFYHDLPWHPAEDGHS 344
Query: 93 KACKK 97
AC+K
Sbjct: 345 HACRK 349
>gi|260798757|ref|XP_002594366.1| hypothetical protein BRAFLDRAFT_277633 [Branchiostoma floridae]
gi|229279600|gb|EEN50377.1| hypothetical protein BRAFLDRAFT_277633 [Branchiostoma floridae]
Length = 1771
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN+H+ KC F+ +Y+ +GR SGGVC C+H T GR+C CK YY+DP++ I
Sbjct: 323 CNCNSHSNKCHFDPAVYEQTGRVSGGVCDDCQHNTMGRNCEECKPFYYQDPNKDIRDPNI 382
Query: 95 C 95
C
Sbjct: 383 C 383
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q CNCN HA +C S G C+ CR TAG+ C CK+GYY DP
Sbjct: 845 QRCNCNGHADRCD-----------SVTGSCIDCRDNTAGQFCQTCKDGYYGDP 886
>gi|326933772|ref|XP_003212973.1| PREDICTED: laminin subunit beta-3-like [Meleagris gallopavo]
Length = 1166
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q CNCN H+ C F++E++ SG SGGVC C+H T G +C CK Y+R+ + +TH
Sbjct: 312 QRCNCNGHSASCHFDLEVFHASGGVSGGVCDDCQHNTEGNNCERCKTNYFRNQRQDLTHP 371
Query: 93 KACK 96
+AC+
Sbjct: 372 EACQ 375
>gi|198432295|ref|XP_002126784.1| PREDICTED: similar to Netrin-4 precursor (Beta-netrin)
(Hepar-derived netrin-like protein) [Ciona intestinalis]
Length = 677
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNC++H+++CRF+ EL++ SG SGGVC+ C+H T GR+CH CK GY+R ++ +
Sbjct: 335 CNCHSHSQRCRFDSELWERSGNRSGGVCMGCQHKTRGRYCHLCKPGYFRRLEADLSDQDI 394
Query: 95 CKK 97
C++
Sbjct: 395 CRE 397
>gi|334333721|ref|XP_003341754.1| PREDICTED: laminin subunit beta-1-like [Monodelphis domestica]
Length = 1703
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 38/64 (59%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C C+ HAR C F+M ++ SG SGGVC C+H TAGRHC C+ Y+RDP
Sbjct: 329 QKCECHQHARSCHFDMAVFVASGNVSGGVCDACQHHTAGRHCEICRPFYHRDPREDPRSP 388
Query: 93 KACK 96
CK
Sbjct: 389 YTCK 392
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA +C GVC C T GRHC C++GYY DP
Sbjct: 863 QPCECNGHAEQCH-----------PHTGVCWACGDATTGRHCERCQDGYYGDP 904
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C CNN+ ++ G C +C H T G HC +C+ GYY + RP R+
Sbjct: 978 CQCNNNIDPSD------PMACDPHSGHCQRCLHHTHGPHCSHCQPGYYGNALRPRGCRR 1030
>gi|354500239|ref|XP_003512208.1| PREDICTED: laminin subunit beta-2 [Cricetulus griseus]
gi|344254379|gb|EGW10483.1| Laminin subunit beta-2 [Cricetulus griseus]
Length = 1800
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C CN HA C F+M +Y SG SGGVC C+H TAGRHC C+ +Y DP++ +
Sbjct: 348 RKCECNGHAHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYHDPTKDMRDP 407
Query: 93 KACK 96
AC+
Sbjct: 408 AACR 411
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR +T G HC C G++ DP P
Sbjct: 879 CVCNGHADECD-----------THTGACLGCRDYTGGEHCERCVAGFHGDPRLP 921
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C + T G HC +CK G++ +R HR C
Sbjct: 1007 GQCLRCLYNTEGPHCGHCKPGFHGQAARQSCHRCTC 1042
>gi|358418209|ref|XP_609073.6| PREDICTED: laminin subunit beta-2 [Bos taurus]
gi|359078364|ref|XP_002697124.2| PREDICTED: laminin subunit beta-2 [Bos taurus]
Length = 1594
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C C+ HAR C F+M LY SG SGGVC C+H TAGRHC C+ ++RDP
Sbjct: 305 QECKCHGHARSCHFDMALYLASGNVSGGVCDACQHNTAGRHCELCQPFFHRDPLEDPRSL 364
Query: 93 KACK 96
+CK
Sbjct: 365 HSCK 368
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
Q C CN HA C GVC CR T GRHC C +GYY DP+
Sbjct: 869 QPCACNGHAELCH-----------PLTGVCQDCRGATTGRHCERCLDGYYGDPT 911
>gi|73985821|ref|XP_533831.2| PREDICTED: laminin subunit beta-2 [Canis lupus familiaris]
Length = 1801
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ HA C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDPS+ +
Sbjct: 348 RKCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPSKDLRDP 407
Query: 93 KACK 96
C+
Sbjct: 408 AMCR 411
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 11/56 (19%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CN HA +C + G C+ CR T G HC C G++ DP P
Sbjct: 878 QPCVCNGHADECD-----------THTGACVGCRDHTGGEHCERCIAGFHGDPRLP 922
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C + T G HC +CK G+Y +R HR C
Sbjct: 1008 GQCLRCLYHTEGPHCAHCKPGFYGQAARQSCHRCTC 1043
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT--HR 92
C C HA +C + G C+ C+H T G +C C++ Y+ P RP H
Sbjct: 286 CFCYGHASQCAPAPGAPAHAEGMVHGACV-CKHNTRGLNCEQCQDFYHDLPWRPAEDGHS 344
Query: 93 KACKK 97
AC+K
Sbjct: 345 HACRK 349
>gi|348539079|ref|XP_003457017.1| PREDICTED: laminin subunit beta-1-like [Oreochromis niloticus]
Length = 1797
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+M +Y +G SGGVC C H T GR+C CK YY+DP+R I +
Sbjct: 335 CNCNGHSDQCHFDMAVYMATGNVSGGVCDDCLHNTMGRNCETCKPFYYQDPNRDIRDPRV 394
Query: 95 C 95
C
Sbjct: 395 C 395
>gi|31982223|ref|NP_032509.2| laminin subunit beta-2 precursor [Mus musculus]
gi|341940890|sp|Q61292.2|LAMB2_MOUSE RecName: Full=Laminin subunit beta-2; AltName: Full=Laminin-11
subunit beta; AltName: Full=Laminin-14 subunit beta;
AltName: Full=Laminin-15 subunit beta; AltName:
Full=Laminin-3 subunit beta; AltName: Full=Laminin-4
subunit beta; AltName: Full=Laminin-7 subunit beta;
AltName: Full=Laminin-9 subunit beta; AltName:
Full=S-laminin subunit beta; Short=S-LAM beta; Flags:
Precursor
gi|19913504|gb|AAH26051.1| Laminin, beta 2 [Mus musculus]
gi|148689344|gb|EDL21291.1| laminin, beta 2, isoform CRA_a [Mus musculus]
gi|148689345|gb|EDL21292.1| laminin, beta 2, isoform CRA_a [Mus musculus]
Length = 1799
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H C F+M +Y SG SGGVC C+H TAGRHC +C+ +YRDP++ +
Sbjct: 350 CECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAV 409
Query: 95 CKK 97
C+
Sbjct: 410 CRP 412
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN A +C + G CL CR +T G HC C G++ DP P
Sbjct: 878 CVCNGRADECDTHT-----------GACLGCRDYTGGEHCERCIAGFHGDPRLP 920
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
G CL+C H T G HC YCK G++ +R HR C +
Sbjct: 1006 GQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLL 1044
>gi|56788965|gb|AAH88400.1| Lamb2 protein [Rattus norvegicus]
Length = 1593
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H+ C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ + A
Sbjct: 350 CECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPAA 409
Query: 95 CKK 97
C+
Sbjct: 410 CRP 412
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN A +C + G CL CR +T G HC C G++ DP P
Sbjct: 880 CVCNGRADECDAHT-----------GACLGCRDYTGGEHCERCIAGFHGDPRLP 922
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
G CL+C H T G HC +CK G++ +R HR C +
Sbjct: 1008 GQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLL 1046
>gi|126336016|ref|XP_001377786.1| PREDICTED: laminin subunit beta-2 [Monodelphis domestica]
Length = 1794
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+ H+R C F+M ++ SG +SGGVC C+H TAG HC C+ YYRDP+R +
Sbjct: 345 CECHQHSRSCHFDMAVFLASGNTSGGVCDDCQHHTAGMHCEICRPFYYRDPTRDLRDPAV 404
Query: 95 CKK 97
C+
Sbjct: 405 CRP 407
>gi|317418913|emb|CBN80951.1| Laminin subunit beta-3 [Dicentrarchus labrax]
Length = 1107
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 37/63 (58%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CNNHA++CRF+ +Y+ SGR SGGVC C H T G C C GY +P +
Sbjct: 256 QRCECNNHAQRCRFDQAVYEASGRRSGGVCEDCMHHTTGLKCDQCAPGYQPNPRSRMDRP 315
Query: 93 KAC 95
AC
Sbjct: 316 DAC 318
>gi|169977451|emb|CAP64304.1| MGC160042 protein [Bos taurus]
Length = 196
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+TC CN HA C F++ +++ SG SGGVC C+H T G+HC CK G+Y D RP +
Sbjct: 110 RTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAP 169
Query: 93 KACK 96
ACK
Sbjct: 170 DACK 173
>gi|1244720|gb|AAC53535.1| laminin beta 2 [Mus musculus]
Length = 1799
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H C F+M +Y SG SGGVC C+H TAGRHC +C+ +YRDP++ +
Sbjct: 350 CECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAV 409
Query: 95 CKK 97
C+
Sbjct: 410 CRP 412
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN A +C + G CL CR +T G HC C G++ DP P
Sbjct: 878 CVCNGRADECDTHT-----------GACLGCRDYTGGEHCERCIAGFHGDPRLP 920
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
G CL+C H T G HC YCK G++ +R HR C +
Sbjct: 1006 GQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLL 1044
>gi|281338355|gb|EFB13939.1| hypothetical protein PANDA_009358 [Ailuropoda melanoleuca]
Length = 1805
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ HA C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDPS+ +
Sbjct: 352 RKCECHGHAHSCHFDMAVYLASGNVSGGVCDGCQHDTAGRHCELCRPFFYRDPSKDLRDP 411
Query: 93 KACK 96
C+
Sbjct: 412 AVCR 415
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 11/56 (19%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 882 QPCVCNGHADECD-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 926
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR +C
Sbjct: 1012 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCSC 1047
Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT--HR 92
C C HA +C + G C+ C+H T G +C C++ Y+ P RP H
Sbjct: 290 CFCYGHASQCAPAPGAPAHAEGMVHGACV-CKHNTRGLNCEQCQDFYHDLPWRPAEDGHS 348
Query: 93 KACKK 97
AC+K
Sbjct: 349 HACRK 353
>gi|291244980|ref|XP_002742373.1| PREDICTED: laminin, beta 2-like [Saccoglossus kowalevskii]
Length = 1752
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNHA +C F+ +Y+ +G+ SGGVC C+H T GR+C C+ +Y DPS+ I
Sbjct: 316 CNCNNHASRCHFDPAVYEQTGQISGGVCDNCQHNTLGRNCEQCRPFFYMDPSKDIRDPNV 375
Query: 95 C 95
C
Sbjct: 376 C 376
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G C CR TAG+ C C G+Y DP
Sbjct: 837 QPCQCNGHADTCD-----------SRTGTCEDCRDNTAGQFCQICALGFYGDP 878
>gi|296474939|tpg|DAA17054.1| TPA: laminin subunit beta-2-like [Bos taurus]
Length = 1557
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C C+ HAR C F+M LY SG SGGVC C+H TAGRHC C+ ++RDP
Sbjct: 302 QECKCHGHARSCHFDMALYLASGNVSGGVCDACQHNTAGRHCELCQPFFHRDPLEDPRSL 361
Query: 93 KACK 96
+CK
Sbjct: 362 HSCK 365
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
Q C CN HA C GVC CR T GRHC C +GYY DP+
Sbjct: 832 QPCACNGHAELCH-----------PLTGVCQDCRGATTGRHCERCLDGYYGDPT 874
>gi|301770389|ref|XP_002920595.1| PREDICTED: laminin subunit beta-2-like [Ailuropoda melanoleuca]
Length = 1797
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ HA C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDPS+ +
Sbjct: 344 RKCECHGHAHSCHFDMAVYLASGNVSGGVCDGCQHDTAGRHCELCRPFFYRDPSKDLRDP 403
Query: 93 KACK 96
C+
Sbjct: 404 AVCR 407
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 11/56 (19%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 874 QPCVCNGHADECD-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 918
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR +C
Sbjct: 1004 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCSC 1039
>gi|170571450|ref|XP_001891733.1| Laminin related. see also lmb- protein 1 [Brugia malayi]
gi|158603600|gb|EDP39466.1| Laminin related. see also lmb- protein 1, putative [Brugia malayi]
Length = 1789
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C F+ +Y+ SG SGGVC +C H T G++C CK +YR+P RPIT
Sbjct: 343 CECNGHAARCHFDRAVYQASGFVSGGVCDECLHNTQGKNCEQCKPYFYRNPDRPITDPYV 402
Query: 95 C 95
C
Sbjct: 403 C 403
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN+HA C G C+ C T G +C +CK+GYY DP
Sbjct: 884 VCQCNDHASICD-----------QKTGACIDCLDLTDGYYCDHCKDGYYGDP 924
>gi|32966030|gb|AAP92113.1| netrin 4 [Homo sapiens]
Length = 605
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C CN HA C F++ +++ SG SGGVC C+H T G++C CK G+YRD RP +
Sbjct: 330 RACKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|312087421|ref|XP_003145465.1| LAM-1 protein [Loa loa]
Length = 1371
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA +C F+ +Y+ SG SGGVC +C H T G++C CK +YR+P RPIT
Sbjct: 61 CECNGHAARCHFDRAVYQASGFVSGGVCDECLHNTQGKNCEQCKPYFYRNPDRPITDPYV 120
Query: 95 C 95
C
Sbjct: 121 C 121
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN+HA C G C+ C T G +C CK+GYY DP
Sbjct: 588 VCQCNDHASICD-----------QKTGACIDCLDLTDGYYCDRCKDGYYGDP 628
>gi|226479132|emb|CAX73061.1| laminin, beta 1 [Schistosoma japonicum]
Length = 460
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 38/65 (58%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ CNCNNHA C FN LY SG SGG C C H T G +C +C+ +YR PS PI H
Sbjct: 332 EKCNCNNHATACFFNPVLYIKSGNVSGGNCHGCMHNTEGVNCEFCQPNFYRHPSYPIDHP 391
Query: 93 KACKK 97
C+
Sbjct: 392 LTCQP 396
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C HA +C+ + L GVC +C H TAG +C C + ++ P P T A
Sbjct: 270 CTCFGHASRCKPKSSVEILKPEKVYGVC-ECTHNTAGENCETCADFHWNKPWMPATRDAA 328
>gi|322792331|gb|EFZ16315.1| hypothetical protein SINV_06367 [Solenopsis invicta]
Length = 288
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNH C F+ +Y+ SGR SGGVC C+H T G++C CK YY D ++ I+ R+A
Sbjct: 207 CNCNNHTNSCHFDETVYERSGRVSGGVCDDCQHNTRGQNCEQCKPFYYHDVTKEISDREA 266
Query: 95 CKK 97
C+
Sbjct: 267 CQP 269
>gi|296225177|ref|XP_002758379.1| PREDICTED: laminin subunit beta-2 [Callithrix jacchus]
Length = 1798
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 345 RKCECHGHTHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
AC+
Sbjct: 405 AACR 408
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 877 CVCNGHADECD-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 919
Score = 37.7 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G C +CK G+Y +R HR C
Sbjct: 1005 GQCLRCLHHTEGPQCAHCKPGFYGQAARQSCHRCTC 1040
>gi|449475443|ref|XP_002190686.2| PREDICTED: netrin-3 [Taeniopygia guttata]
Length = 588
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 10/61 (16%)
Query: 46 FNMELYKLSGRSSG----------GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
++ L + G+S+G GVCL CRH TAGRHCHYCKEG+YRD S+ IT RKAC
Sbjct: 326 YSFSLQRARGQSTGAGQVVFDLAAGVCLNCRHNTAGRHCHYCKEGFYRDLSKAITDRKAC 385
Query: 96 K 96
K
Sbjct: 386 K 386
>gi|11120048|gb|AAG30822.1|AF278532_1 beta-netrin [Homo sapiens]
Length = 628
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C CN HA C F++ +++ SG SGGVC C+H T G++C CK G+YRD RP +
Sbjct: 330 RACKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAP 389
Query: 93 KACKK 97
ACK
Sbjct: 390 DACKP 394
>gi|224094402|ref|XP_002189547.1| PREDICTED: netrin-4 [Taeniopygia guttata]
Length = 629
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
++C CN HA C F+++++ SG SGGVC C+H T G+HC CK G+YRD +P +
Sbjct: 331 RSCKCNGHADTCHFDVDVWLASGNRSGGVCDNCQHNTEGQHCQRCKLGFYRDLRKPFSAP 390
Query: 93 KACKK 97
ACK
Sbjct: 391 DACKP 395
>gi|410951155|ref|XP_003982265.1| PREDICTED: laminin subunit beta-2 [Felis catus]
Length = 1801
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ HA C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 348 RKCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 407
Query: 93 KACK 96
C+
Sbjct: 408 AVCR 411
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 11/56 (19%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 878 QPCVCNGHADECD-----------THTGTCLGCRDHTGGEHCERCIAGFHGDPRLP 922
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C + T G HC +CK G++ +R HR C
Sbjct: 1008 GQCLRCLYHTEGPHCAHCKPGFHGQATRQSCHRCTC 1043
>gi|313151244|ref|NP_001186242.1| laminin subunit beta-4 [Gallus gallus]
Length = 1773
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+M +Y+ SG SGGVC C+H T G HC CK +Y+DP + I+ A
Sbjct: 354 CNCNGHSGRCHFDMAVYQASGGVSGGVCEDCQHNTTGHHCDQCKLFFYQDPHKAISDPHA 413
Query: 95 C 95
C
Sbjct: 414 C 414
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPS 86
G CL C FTAG HC C +GYY +PS
Sbjct: 901 GECLNCSRFTAGSHCERCIDGYYGNPS 927
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSG---GVCLQCRHFTAGR 72
G+ L+K+ + + + C CN HA C L G G C+ C H T G
Sbjct: 268 GDPLEKYYYAVYEMVVRGNCFCNGHASHCDPIQNLRGDVFHQPGMVHGRCI-CHHNTEGL 326
Query: 73 HCHYCKEGYYRDPSRPI--THRKACKK 97
C CK+ Y P RP T ACK+
Sbjct: 327 SCERCKDFYNDAPWRPAEGTQNNACKR 353
>gi|326928025|ref|XP_003210185.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-2-like
[Meleagris gallopavo]
Length = 1814
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN H+R+C F+M ++ +G +SG VC C+H T GR CH CK YY+DPS+ +
Sbjct: 369 CDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRRCHLCKPFYYKDPSKDLRDPAV 428
Query: 95 CK 96
C+
Sbjct: 429 CR 430
>gi|321474022|gb|EFX84988.1| hypothetical protein DAPPUDRAFT_300823 [Daphnia pulex]
Length = 1776
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+ +Y+ +GR SGGVC C H T GR+C CK +Y+DP++ I+
Sbjct: 333 CNCNQHSDQCHFDPAVYEATGRISGGVCDDCNHNTMGRNCEQCKAFFYQDPTKAISDADV 392
Query: 95 C 95
C
Sbjct: 393 C 393
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G CL CR FT HC C + YY DP
Sbjct: 863 QRCECNGHADLCD-----------SRTGRCLDCRDFTTDDHCDRCLDSYYGDP 904
>gi|308072152|dbj|BAJ22065.1| netrin [Dugesia japonica]
Length = 465
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN H+ +C FN +LY + ++GGVC+ C+H T G +C C+ GYYR+ ++P HR A
Sbjct: 355 CDCNLHSYRCNFNHQLYVKNNFTNGGVCINCQHNTTGNNCEICQNGYYRNWTKPQEHRSA 414
Query: 95 C 95
C
Sbjct: 415 C 415
>gi|511042|emb|CAA53532.1| s-laminin [Mus musculus]
Length = 81
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+C CN H C F+M +Y SG SGGVC C+H TAGRHC +C+ +YRDP++ +
Sbjct: 1 NSCECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDP 60
Query: 93 KACKK 97
C+
Sbjct: 61 AVCRP 65
>gi|326679113|ref|XP_692838.5| PREDICTED: laminin subunit beta-1 [Danio rerio]
Length = 1779
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 38/61 (62%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+M +Y +G SGGVC C H T GR+C CK YY+DP + I A
Sbjct: 332 CNCNGHSNQCHFDMAVYLATGNVSGGVCNNCLHNTMGRNCESCKPFYYQDPEKDIRDPAA 391
Query: 95 C 95
C
Sbjct: 392 C 392
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C CN+HA C G C CR TAG+ C C +GYY +P+
Sbjct: 853 CQCNSHAESCD-----------PESGACYDCRDNTAGQLCERCVDGYYGNPA 893
>gi|74150060|dbj|BAE24350.1| unnamed protein product [Mus musculus]
Length = 1375
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H C F+M +Y SG SGGVC C+H TAGRHC +C+ +YRDP++ +
Sbjct: 350 CECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAV 409
Query: 95 CKK 97
C+
Sbjct: 410 CRP 412
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
G CL+C H T G HC YCK G++ +R HR C +
Sbjct: 1006 GQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLL 1044
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 11/55 (20%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN A +C + G CL CR +T G HC C G++ DP P
Sbjct: 877 PCVCNGRADECDTHT-----------GACLGCRDYTGGEHCERCIAGFHGDPRLP 920
>gi|350398691|ref|XP_003485275.1| PREDICTED: laminin subunit beta-1-like [Bombus impatiens]
Length = 2188
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CNNH C F+ +Y+ SGR SGGVC C+H T G++C CK +Y D ++ ITH +A
Sbjct: 753 CICNNHTNSCHFDEAVYENSGRVSGGVCDDCQHNTMGKNCELCKPFFYHDVTKDITHPEA 812
Query: 95 C 95
C
Sbjct: 813 C 813
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G C+ CR +T G +C C E YY DP
Sbjct: 1279 QRCECNGHAESCD-----------SKTGACINCRDYTTGHNCDRCIETYYGDP 1320
>gi|348521256|ref|XP_003448142.1| PREDICTED: netrin-4 [Oreochromis niloticus]
Length = 614
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA+ CRF+ ++ SG+ SGGVC C H T GR C CK G+YRDP+RP +
Sbjct: 325 CKCNGHAQTCRFDWTAWRESGQRSGGVC-DCLHNTEGRQCEKCKPGFYRDPNRPHAAPDS 383
Query: 95 CKK 97
CK
Sbjct: 384 CKP 386
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 11 DKESGGEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSG---GVCLQCRH 67
D S E L + D I +C CN HA +C + R++ G C+ CRH
Sbjct: 232 DLASAHEPLPTRHFAIYDLIVKGSCFCNGHADQCVPMPGYQPVRDRTNHVVHGKCV-CRH 290
Query: 68 FTAGRHCHYCKEGYYRDPSRP 88
TAG HC C Y P +P
Sbjct: 291 NTAGVHCESCAPLYNDRPWQP 311
>gi|194209476|ref|XP_001492741.2| PREDICTED: laminin subunit beta-4 [Equus caballus]
Length = 1747
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C+CN H+ +C FN +Y SG SGGVC C+H T G+HCH C+ +YRDP + I+
Sbjct: 331 ACSCNGHSDRCHFNSTVYLASGGLSGGVCEDCQHNTEGQHCHRCRPLFYRDPLKAISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPS 86
G C C FT GR+C C +GYY +PS
Sbjct: 877 GSCFNCGGFTTGRNCERCIDGYYGNPS 903
>gi|449480957|ref|XP_004177244.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-4 [Taeniopygia
guttata]
Length = 1902
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN+H+ +C F+M +Y+ SG SGGVC C+ T G+HC CK +Y+DP + I+ +
Sbjct: 471 CNCNSHSSRCHFDMAVYQASGGVSGGVCEDCQDNTTGQHCDRCKPSFYQDPLKDISDPRP 530
Query: 95 C 95
C
Sbjct: 531 C 531
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN HA C L+G CL CR FTAG HC C +GYY +P
Sbjct: 1004 CPCNGHAELCD------PLTGE-----CLNCRGFTAGSHCERCMDGYYGNP 1043
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 17 EHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSG---GVCLQCRHFTAGRH 73
+ L+K+ + + + +C CN HA +C L SG G C+ C H T G
Sbjct: 386 DPLEKYYYAIYEMVVQGSCFCNGHASQCDSIQNLRGDVFHQSGMVHGRCI-CHHNTEGFS 444
Query: 74 CHYCKEGYYRDPSRPI--THRKACKK 97
C CK+ Y P RP T ACK+
Sbjct: 445 CERCKDFYNDAPWRPAEGTQDNACKR 470
>gi|395516305|ref|XP_003762331.1| PREDICTED: laminin subunit beta-2-like [Sarcophilus harrisii]
Length = 1870
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 38/64 (59%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ HAR C F+M ++ SG SGGVC C+H TAGRHC C+ Y+RDP
Sbjct: 360 RECECHQHARSCHFDMAVFVASGNVSGGVCDACQHHTAGRHCEICRPFYHRDPREDPRSP 419
Query: 93 KACK 96
CK
Sbjct: 420 YTCK 423
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN H +C G C C T GRHC C++GYY DP
Sbjct: 942 QPCECNGHTEQCH-----------PHTGACQACGDATTGRHCERCQDGYYGDP 983
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C CNN+ ++ G C +C H T G HC +C+ GYY + RP R+
Sbjct: 1057 CQCNNNIDPSD------PMACDPHSGHCQRCLHHTHGPHCSHCQPGYYGNALRPRGCRR 1109
>gi|348539077|ref|XP_003457016.1| PREDICTED: laminin subunit beta-2-like [Oreochromis niloticus]
Length = 1865
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN+H+ C F+M +Y +G SGGVC C+H T G HC CK YY+DP + I +
Sbjct: 411 CNCNSHSTACHFDMAVYLATGNVSGGVCDDCQHNTMGHHCETCKPFYYKDPVKDIRDPRV 470
Query: 95 C 95
C
Sbjct: 471 C 471
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN HA +C G C+ CR T G C C GYY +P
Sbjct: 942 CQCNGHADQCD-----------QRTGACISCRDNTGGDKCERCANGYYGNP 981
>gi|426249942|ref|XP_004018705.1| PREDICTED: laminin subunit beta-1-like [Ovis aries]
Length = 1600
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C C+ HAR C F+M +Y SG SGGVC C+H TAGRHC C+ ++RDP
Sbjct: 302 QECECHGHARSCHFDMAVYLASGNVSGGVCDACQHNTAGRHCELCQPFFHRDPLEDPRSL 361
Query: 93 KACK 96
+CK
Sbjct: 362 HSCK 365
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
Q C CN HA C S GVC CR T G+HC C +GYY DP+
Sbjct: 827 QPCACNGHAESCH-----------SLTGVCQDCRGATTGQHCERCLDGYYGDPT 869
>gi|410919269|ref|XP_003973107.1| PREDICTED: laminin subunit beta-3-like [Takifugu rubripes]
Length = 1158
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 37/63 (58%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CN+HAR+CRF+ +Y+ SGR SGGVC C H T G C C GY +P +
Sbjct: 305 QRCECNSHARRCRFDPAVYEASGRRSGGVCEGCMHHTTGPKCDRCAPGYQPNPRSKMDRP 364
Query: 93 KAC 95
AC
Sbjct: 365 DAC 367
>gi|340709968|ref|XP_003393571.1| PREDICTED: laminin subunit beta-1-like isoform 1 [Bombus
terrestris]
Length = 1774
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CNNH C F+ +Y+ SGR SGGVC C+H T G++C CK +Y D ++ ITH +A
Sbjct: 339 CICNNHTNSCHFDEAVYENSGRVSGGVCDDCQHNTMGKNCELCKPFFYHDVTKDITHPEA 398
Query: 95 C 95
C
Sbjct: 399 C 399
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G C+ CR +T G +C C E YY DP
Sbjct: 865 QRCECNGHAESCD-----------SKTGACINCRDYTTGHNCDRCIETYYGDP 906
>gi|339234671|ref|XP_003378890.1| laminin subunit beta-1 [Trichinella spiralis]
gi|316978498|gb|EFV61480.1| laminin subunit beta-1 [Trichinella spiralis]
Length = 1750
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA +C F+ +Y+ SG SGGVC C+H T G++C CK +YRDP R ++
Sbjct: 300 CNCNEHANRCHFDHAVYEASGFVSGGVCDDCQHNTMGKNCEMCKPYFYRDPDRALSDPYV 359
Query: 95 CK 96
C+
Sbjct: 360 CR 361
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN HA C G C+ CR TAG HC C+ GYY DP
Sbjct: 831 CQCNGHANVCD-----------QRTGACVDCRDLTAGHHCEQCQLGYYGDP 870
>gi|332237974|ref|XP_003268179.1| PREDICTED: laminin subunit beta-4 [Nomascus leucogenys]
Length = 1761
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC +C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDHCRPVFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 17 EHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSG---GVCLQCRHFTAGRH 73
+ L K+ + + I +C CN HA +CR +++ G G C+ C+H T G +
Sbjct: 247 DSLDKYYYALYEMIVRGSCFCNGHASECRPMQKVWGDVFSPPGMVHGQCV-CQHNTDGPN 305
Query: 74 CHYCKEGYYRDPSRP 88
C CK+ + P RP
Sbjct: 306 CERCKDFFQDAPWRP 320
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C CN A C G C C FT GR+C C +GYY +PS
Sbjct: 863 CPCNGFAELCD-----------PETGSCFNCGGFTTGRNCERCIDGYYGNPS 903
>gi|340709970|ref|XP_003393572.1| PREDICTED: laminin subunit beta-1-like isoform 2 [Bombus
terrestris]
Length = 1803
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CNNH C F+ +Y+ SGR SGGVC C+H T G++C CK +Y D ++ ITH +A
Sbjct: 368 CICNNHTNSCHFDEAVYENSGRVSGGVCDDCQHNTMGKNCELCKPFFYHDVTKDITHPEA 427
Query: 95 C 95
C
Sbjct: 428 C 428
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G C+ CR +T G +C C E YY DP
Sbjct: 894 QRCECNGHAESCD-----------SKTGACINCRDYTTGHNCDRCIETYYGDP 935
>gi|432865797|ref|XP_004070618.1| PREDICTED: laminin subunit beta-1-like [Oryzias latipes]
Length = 1766
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+M +Y +G SGGVC C H T GR+C C+ YY+DP+R + +
Sbjct: 406 CNCNGHSNQCHFDMAVYLATGNVSGGVCDNCLHNTVGRNCEMCQPFYYQDPNRDVRDPQV 465
Query: 95 C 95
C
Sbjct: 466 C 466
>gi|328792916|ref|XP_001122457.2| PREDICTED: laminin subunit beta-1 [Apis mellifera]
Length = 1774
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNH C F+ +Y+ SGR SGGVC C+H T G++C CK YY D ++ I+ +A
Sbjct: 339 CNCNNHTNSCHFDETVYERSGRVSGGVCDDCQHNTRGQNCELCKPFYYHDVTKDISDSEA 398
Query: 95 C 95
C
Sbjct: 399 C 399
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G C+ CR +T G +C C E YY DP
Sbjct: 865 QRCECNGHAESCD-----------SKTGACINCRDYTTGHNCDRCIETYYGDP 906
>gi|198417037|ref|XP_002127794.1| PREDICTED: similar to LOC494988 protein [Ciona intestinalis]
Length = 1754
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ CNCNNHA +C F+ +Y +G+ SGGVC C+H T GR+C C YY+D S+ I
Sbjct: 323 KACNCNNHATECHFDPAVYAATGQVSGGVCENCQHNTVGRNCEQCASYYYQDASKDIRDP 382
Query: 93 KAC 95
C
Sbjct: 383 TVC 385
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
CNCN H C G CL CR T G HC C +GYY +P
Sbjct: 853 CNCNGHTDSCD-----------QETGECLGCRDNTMGAHCDSCIDGYYGNP 892
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CNN N++ + + S+ GVC C H TAG HC C++ YY +P
Sbjct: 962 CECNN-------NIDPFDPTACDSATGVCTNCLHNTAGPHCEQCRDYYYGNP 1006
>gi|297289126|ref|XP_001090498.2| PREDICTED: laminin subunit beta-4 [Macaca mulatta]
Length = 1737
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M +Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 306 SCSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 365
Query: 94 AC 95
AC
Sbjct: 366 AC 367
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
+C CN A C S G C C FT GR+C C +GYY +PS
Sbjct: 837 SCPCNGFAELCD-----------SETGSCFNCGGFTTGRNCERCIDGYYGNPS 878
>gi|355747929|gb|EHH52426.1| hypothetical protein EGM_12864 [Macaca fascicularis]
Length = 1762
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M +Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
+C CN A C G C C FT GR+C C +GYY +PS
Sbjct: 862 SCPCNGFAELCD-----------PETGSCFNCGGFTTGRNCERCIDGYYGNPS 903
>gi|332018204|gb|EGI58809.1| Laminin subunit beta-1 [Acromyrmex echinatior]
Length = 1757
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNH C F+ +Y+ SGR SGGVC C+H T G++C CK YY D ++ I+ +A
Sbjct: 323 CNCNNHTNSCHFDETVYERSGRVSGGVCDDCQHNTRGQNCEQCKPFYYHDVTKDISDPEA 382
Query: 95 CK 96
C+
Sbjct: 383 CQ 384
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C C+ HA C S G C+ CR FT G +C C + +Y DP
Sbjct: 849 QRCECHGHADSCD-----------SKTGACINCRDFTTGHNCDRCVDDFYGDP 890
>gi|402864549|ref|XP_003896522.1| PREDICTED: laminin subunit beta-4 isoform 1 [Papio anubis]
Length = 1762
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M +Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
+C CN A C G C C FT GR+C C +GYY +PS
Sbjct: 862 SCPCNGFAELCD-----------PETGSCFNCGGFTTGRNCERCIDGYYGNPS 903
>gi|355560912|gb|EHH17598.1| hypothetical protein EGK_14037 [Macaca mulatta]
Length = 1762
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M +Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
+C CN A C G C C FT GR+C C +GYY +PS
Sbjct: 862 SCPCNGFAELCD-----------PETGSCFNCGGFTTGRNCERCIDGYYGNPS 903
>gi|334348518|ref|XP_003342069.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-4-like
[Monodelphis domestica]
Length = 1762
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+CNCN H+ C F+M LY S SGG+C C+H T G+HC CK +YRDP + I+
Sbjct: 331 SCNCNGHSEHCHFDMSLYLSSNGISGGMCEDCQHNTMGQHCDQCKPLFYRDPLKAISDPH 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
Q C CN A C G C C+ FTAG +C C +GYY +PS
Sbjct: 862 QPCPCNGFAELCD-----------PETGSCFNCKGFTAGLNCERCIDGYYGNPS 904
>gi|118102449|ref|XP_425827.2| PREDICTED: laminin subunit beta-3 [Gallus gallus]
Length = 1175
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q CNCN H+ C F+ E++ SG SGGVC C+H T G +C CK Y+R+ + +TH
Sbjct: 322 QLCNCNGHSASCHFDPEVFHSSGGVSGGVCDDCQHNTEGNNCERCKTNYFRNQRQDLTHP 381
Query: 93 KACK 96
+AC+
Sbjct: 382 EACQ 385
>gi|47218338|emb|CAG04170.1| unnamed protein product [Tetraodon nigroviridis]
Length = 566
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CN HA+ C F+ ++ SG+ SGGVC C H T GR C C+ G+YRDP RP T
Sbjct: 337 QKCKCNGHAQSCHFDWTAWRESGQRSGGVC-DCLHNTEGRQCQKCRAGFYRDPRRPHTAP 395
Query: 93 KACKK 97
+CK
Sbjct: 396 DSCKP 400
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 12/72 (16%)
Query: 28 DRIFFQTCNCNNHARKC-----------RFNMELYKLSGRSSGGVCLQCRHFTAGRHCHY 76
D I +C+CN HA +C R N ++K R G C+ CRH TAG HC
Sbjct: 255 DLIVKGSCSCNGHAEQCVPALGYQPIRDRTNHVVWKRHTRPVHGKCV-CRHNTAGDHCER 313
Query: 77 CKEGYYRDPSRP 88
C + P +P
Sbjct: 314 CAPLHNDRPWQP 325
>gi|256080034|ref|XP_002576288.1| laminin beta chain-related [Schistosoma mansoni]
gi|350646049|emb|CCD59327.1| laminin beta chain-related [Schistosoma mansoni]
Length = 1753
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 38/65 (58%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ CNCNNHA C FN L+ SG SGG C C H T G +C +C+ +YR PS PI H
Sbjct: 332 EKCNCNNHATACFFNPVLFSKSGNVSGGNCHGCIHNTEGVNCEFCQPNFYRHPSYPIDHP 391
Query: 93 KACKK 97
C+
Sbjct: 392 LTCQP 396
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 58 SGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ G+C CR T G HC C+EG+Y DP R
Sbjct: 821 TTGICENCRDNTGGDHCETCREGFYGDPLR 850
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C HA +C+ + GVC +C H TAG +C C + ++ P P T A
Sbjct: 270 CTCFGHALRCKPKSSAEIIKPEKVYGVC-ECTHNTAGENCETCADFHWNKPWMPATRDAA 328
>gi|170053227|ref|XP_001862577.1| laminin subunit beta-1 [Culex quinquefasciatus]
gi|167873832|gb|EDS37215.1| laminin subunit beta-1 [Culex quinquefasciatus]
Length = 1682
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 37/62 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CNNHA C F+ +Y+ SGR SGGVC C+H T G HC C +YRDP I
Sbjct: 243 CHCNNHATSCHFDQAVYEHSGRVSGGVCDNCQHNTQGYHCEECAPFFYRDPVEDIQSPYV 302
Query: 95 CK 96
CK
Sbjct: 303 CK 304
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 33 QTCNCNNHARKCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
Q C+C+N N++L + + G C QC + T G HC +C++GYY D
Sbjct: 883 QPCDCSN-------NVDLNQPGNCDAKTGKCQQCLYETEGDHCEFCRDGYYGD 928
>gi|363738709|ref|XP_003642058.1| PREDICTED: netrin-4-like [Gallus gallus]
Length = 632
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+NHA C F++ ++ SG+ SGGVC C+H T G C CK GYYRD +P++ +
Sbjct: 329 CRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMSSAEV 388
Query: 95 CKK 97
CK
Sbjct: 389 CKP 391
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 28 DRIFFQTCNCNNHARKCRFNMELYKLSGRSSG---GVCLQCRHFTAGRHCHYCKEGYYRD 84
D I +C CN HA +C EL +G G C+ CRH TAG HC C Y
Sbjct: 257 DLIIRGSCFCNGHAEEC----ELANRTGEVENVVHGKCV-CRHNTAGDHCEKCAPLYNDQ 311
Query: 85 PSRP 88
P +P
Sbjct: 312 PWKP 315
>gi|402864551|ref|XP_003896523.1| PREDICTED: laminin subunit beta-4 isoform 2 [Papio anubis]
Length = 1560
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M +Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTMYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
+C CN A C G C C FT GR+C C +GYY +PS
Sbjct: 862 SCPCNGFAELCD-----------PETGSCFNCGGFTTGRNCERCIDGYYGNPS 903
>gi|344275830|ref|XP_003409714.1| PREDICTED: laminin subunit beta-2 [Loxodonta africana]
Length = 1799
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H+ C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 346 RKCECHGHSHSCHFDMAVYLASGNVSGGVCDACQHNTAGRHCELCRPFFYRDPTKDLRDP 405
Query: 93 KACK 96
C+
Sbjct: 406 AVCR 409
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 878 CVCNGHADECD-----------THTGACLSCRDHTGGEHCERCIAGFHGDPRLP 920
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
G CL+C H T G HC +CK G++ +R HR C ++
Sbjct: 1006 GQCLRCLHNTEGPHCAHCKPGFHGQAARQSCHRCTCNQL 1044
>gi|47224447|emb|CAG08697.1| unnamed protein product [Tetraodon nigroviridis]
Length = 603
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C C+ HAR C + L+ SGR SGGVC C+H T GRHC CK G++RD P +
Sbjct: 312 QKCQCSGHARSCHLSRRLWLASGRRSGGVCDHCQHNTEGRHCQDCKRGFFRDAGLPKSSP 371
Query: 93 KACKK 97
+CK
Sbjct: 372 DSCKP 376
>gi|432944094|ref|XP_004083319.1| PREDICTED: netrin-4-like [Oryzias latipes]
Length = 656
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA+ CRF+ ++ SG+ SGG+C C H T GR C CK G++RDP RP T +
Sbjct: 366 CKCNGHAQSCRFDWTAWRESGQRSGGIC-DCLHNTEGRQCQKCKAGFHRDPRRPQTAPDS 424
Query: 95 CKK 97
CK
Sbjct: 425 CKP 427
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 28 DRIFFQTCNCNNHARKCRFNMELYKLSGRSSG---GVCLQCRHFTAGRHCHYCKEGYYRD 84
D I +C CN HA +C + R++ G C+ CRH TAG HC C Y
Sbjct: 290 DLIVKGSCFCNGHAEQCVPAPGYKPVRDRTNHVVHGKCV-CRHNTAGEHCERCAPLYNDR 348
Query: 85 PSRP 88
P +P
Sbjct: 349 PWQP 352
>gi|348510523|ref|XP_003442795.1| PREDICTED: netrin-4-like [Oreochromis niloticus]
Length = 642
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 40/65 (61%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C C+ HA C F+ + SGR SGGVC C+H TAGR CH C+ GY+R PS P++
Sbjct: 339 QKCECHGHAATCHFSQRAWLSSGRLSGGVCEDCQHNTAGRRCHRCRYGYHRRPSLPLSSP 398
Query: 93 KACKK 97
C +
Sbjct: 399 HTCTR 403
>gi|405974476|gb|EKC39117.1| Laminin subunit beta-1 [Crassostrea gigas]
Length = 891
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C+F+ +Y+ +G SGGVCL C+H T GR+C C + +Y+DP + I
Sbjct: 329 CNCNGHSDRCKFDPAVYEANGGISGGVCLDCQHNTMGRNCQQCTDMFYQDPYQDIRSSTI 388
Query: 95 CKK 97
CK
Sbjct: 389 CKP 391
>gi|157137637|ref|XP_001657107.1| laminin beta-2 chain [Aedes aegypti]
gi|108880764|gb|EAT44989.1| AAEL003658-PA [Aedes aegypti]
Length = 1761
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 37/62 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CNNHA C F+ +Y+ SGR SGGVC C+H T G HC C +YRDP I
Sbjct: 323 CHCNNHATSCHFDQAVYEHSGRVSGGVCDNCQHNTQGYHCEECSPFFYRDPLEDIQSPYV 382
Query: 95 CK 96
CK
Sbjct: 383 CK 384
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN H C S G C QC+ FT G C C +GYY +P
Sbjct: 853 QMCECNGHTPTCN-----------SKTGECSQCQDFTQGWKCDRCLDGYYGNP 894
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 33 QTCNCNNHARKCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYY 82
Q C+C+N N++L + G CLQC + T G HC +C++G+Y
Sbjct: 962 QQCDCSN-------NVDLNQPGNCDPKSGQCLQCLYDTEGDHCEFCRDGFY 1005
>gi|431839379|gb|ELK01305.1| Laminin subunit beta-1 [Pteropus alecto]
Length = 1785
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHASSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 95 CKK 97
C++
Sbjct: 395 CEQ 397
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G CL C+ +T G +C C GYY DP
Sbjct: 864 QPCQCNGHADDCD-----------SVTGECLSCQDYTTGHNCERCLAGYYGDP 905
>gi|355698924|gb|AES00960.1| laminin, beta 2 [Mustela putorius furo]
Length = 835
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+ HA C F+M Y SG SGGVC C+H TAGRHC C+ +YRDPS+ +
Sbjct: 350 CECHGHAHSCHFDMAAYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPSKDLRDPAV 409
Query: 95 CKK 97
C+
Sbjct: 410 CRS 412
>gi|432865795|ref|XP_004070617.1| PREDICTED: laminin subunit beta-2-like [Oryzias latipes]
Length = 1576
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN+H+ C F+M +Y +G SGGVC +C+H T GR+C C+ YY+DP + I
Sbjct: 331 CNCNDHSNLCHFDMAVYLATGNVSGGVCDECQHNTMGRNCEMCQLFYYKDPLKDIRDPHV 390
Query: 95 CK 96
CK
Sbjct: 391 CK 392
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN HA +C G C+ CR T G C C +GYY P
Sbjct: 653 CQCNGHADQCD-----------QRTGACINCRDNTGGDKCDRCADGYYGSP 692
>gi|403291272|ref|XP_003936721.1| PREDICTED: laminin subunit beta-2 [Saimiri boliviensis boliviensis]
Length = 1798
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 345 RKCECHGHTHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
C+
Sbjct: 405 AVCR 408
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC YCK G++ +R HR C
Sbjct: 1005 GQCLRCLHHTEGPHCAYCKPGFHGQAARQSCHRCTC 1040
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 877 CVCNGHADECD-----------THTGACLGCRDHTGGEHCERCVAGFHGDPRLP 919
>gi|344270450|ref|XP_003407057.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-4-like
[Loxodonta africana]
Length = 1842
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+M +Y SG SGGV C+H T G+HC C+ +YRDP +PI+
Sbjct: 331 CNCNGHSDRCHFDMTVYLASGGLSGGVWEDCQHHTEGQHCDRCRPLFYRDPLKPISDPYT 390
Query: 95 C 95
C
Sbjct: 391 C 391
>gi|156549170|ref|XP_001607740.1| PREDICTED: laminin subunit beta-1-like [Nasonia vitripennis]
Length = 1804
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+ +Y+ SGR SGGVC C+H T G++C CK +Y D S+ IT +A
Sbjct: 366 CNCNGHSTSCHFDEAVYERSGRVSGGVCDDCQHNTRGQNCELCKPFFYHDSSKDITDPEA 425
Query: 95 CK 96
C+
Sbjct: 426 CQ 427
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN HA C S G C CR T G +C C E +Y DP
Sbjct: 899 CECNGHADSCD-----------SKTGACQSCRDSTTGHNCDRCIEAFYGDP 938
>gi|449276705|gb|EMC85137.1| Laminin subunit beta-2, partial [Columba livia]
Length = 1354
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN H+++C F+M +Y +G +SG VC C+H T GR CH CK YY+DPS+ +
Sbjct: 11 CDCNEHSQRCHFDMAVYLATGNTSGSVCDGCQHNTMGRRCHLCKPFYYKDPSKDLRDPAV 70
Query: 95 CK 96
C+
Sbjct: 71 CR 72
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
G CL+C + TAG HC C+ GYY D +R R +C +
Sbjct: 656 GRCLRCLYNTAGPHCAECQPGYYGDATRHSCRRCSCNTL 694
>gi|327273580|ref|XP_003221558.1| PREDICTED: laminin subunit beta-4-like [Anolis carolinensis]
Length = 1637
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CN H+ C F+M +Y + SGGVC C+H T G+HC CK +YRDP + I+
Sbjct: 283 QKCECNGHSESCHFDMAVYLSNNGVSGGVCEDCQHNTEGQHCDQCKLFFYRDPQKAISDP 342
Query: 93 KAC 95
+AC
Sbjct: 343 QAC 345
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 16/59 (27%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY-----RDPSRP 88
C CN A C S G CL CR FT G C C +GYY R+P RP
Sbjct: 818 CPCNGFAELCD-----------SQTGACLDCRDFTTGDSCERCIDGYYGNPLKREPCRP 865
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C+CNN+ E S G CL+C H T G +C YCK GY+
Sbjct: 924 CSCNNNID------EDDPFSCNKDTGECLKCLHNTHGPNCQYCKPGYF 965
>gi|426340512|ref|XP_004034173.1| PREDICTED: laminin subunit beta-2 [Gorilla gorilla gorilla]
Length = 1798
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 345 RKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
C+
Sbjct: 405 AVCR 408
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 877 CVCNGHADECN-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 919
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 1005 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTC 1040
>gi|397495154|ref|XP_003818425.1| PREDICTED: laminin subunit beta-2 [Pan paniscus]
Length = 1798
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 345 RKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
C+
Sbjct: 405 AVCR 408
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 877 CVCNGHADECN-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 919
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 1005 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTC 1040
>gi|119703755|ref|NP_002283.3| laminin subunit beta-2 precursor [Homo sapiens]
gi|156630892|sp|P55268.2|LAMB2_HUMAN RecName: Full=Laminin subunit beta-2; AltName: Full=Laminin B1s
chain; AltName: Full=Laminin-11 subunit beta; AltName:
Full=Laminin-14 subunit beta; AltName: Full=Laminin-15
subunit beta; AltName: Full=Laminin-3 subunit beta;
AltName: Full=Laminin-4 subunit beta; AltName:
Full=Laminin-7 subunit beta; AltName: Full=Laminin-9
subunit beta; AltName: Full=S-laminin subunit beta;
Short=S-LAM beta; Flags: Precursor
gi|119585362|gb|EAW64958.1| laminin, beta 2 (laminin S), isoform CRA_a [Homo sapiens]
gi|119585363|gb|EAW64959.1| laminin, beta 2 (laminin S), isoform CRA_a [Homo sapiens]
gi|225000494|gb|AAI72384.1| Laminin, beta 2 (laminin S) [synthetic construct]
Length = 1798
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 345 RKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
C+
Sbjct: 405 AVCR 408
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 877 CVCNGHADECN-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 919
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 1005 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTC 1040
>gi|8170714|gb|AAB34682.2| laminin beta 2 chain [Homo sapiens]
Length = 1798
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 345 RKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
C+
Sbjct: 405 AVCR 408
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 877 CVCNGHADECN-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 919
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 1005 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTC 1040
>gi|1103585|emb|CAA92279.1| laminin beta 2 chain [Homo sapiens]
Length = 1798
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 345 RKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
C+
Sbjct: 405 AVCR 408
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++RDP P
Sbjct: 877 CVCNGHADECN-----------THTGACLGCRDHTGGEHCERCIAGFHRDPRLP 919
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 1005 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTC 1040
>gi|410265266|gb|JAA20599.1| laminin, beta 2 (laminin S) [Pan troglodytes]
Length = 1798
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 345 RKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
C+
Sbjct: 405 AVCR 408
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 877 CVCNGHADECN-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 919
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 1005 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTC 1040
>gi|402860143|ref|XP_003894494.1| PREDICTED: laminin subunit beta-2 [Papio anubis]
Length = 1798
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 345 RKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
C+
Sbjct: 405 AVCR 408
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 877 CVCNGHADECD-----------THTGACLGCRDHTGGEHCERCIAGFHGDPQLP 919
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 1005 GQCLRCLHHTEGPHCAHCKPGFHGQATRQSCHRCTC 1040
>gi|358336576|dbj|GAA30984.2| laminin beta 1 [Clonorchis sinensis]
Length = 1714
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 20 KKFRCSSRDRIFF-QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
K +R +++D + C CN HA C FN LY SG SGG C C H T G +C YC+
Sbjct: 272 KPWRPATKDSPNACEKCECNGHATACFFNPILYASSGNVSGGNCHGCMHNTEGVNCEYCQ 331
Query: 79 EGYYRDPSRPITHRKACK 96
+ +YR P PI H C+
Sbjct: 332 QNFYRHPDYPINHSMTCQ 349
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT--HR 92
C C HA++C+ + GVC +C H TAG +C C++ Y+ P RP T
Sbjct: 224 CTCFGHAKQCKPKSTAEIIKPEKVYGVC-ECTHHTAGENCETCEDFYWNKPWRPATKDSP 282
Query: 93 KACKK 97
AC+K
Sbjct: 283 NACEK 287
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
Q C CN + C + G C CR T G +C CKEG+Y DP R
Sbjct: 761 QPCFCNEMSNMCN-----------QTTGECENCRENTGGMYCEKCKEGFYGDPQR 804
>gi|297681285|ref|XP_002818395.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-4 [Pongo
abelii]
Length = 1715
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C CN A C G C C FT GR+C C +GYY +PS
Sbjct: 819 CPCNGFAELCD-----------PETGSCFNCGGFTTGRNCERCIDGYYGNPS 859
>gi|332816911|ref|XP_003309859.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-2 [Pan
troglodytes]
Length = 1792
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 339 RKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 398
Query: 93 KACK 96
C+
Sbjct: 399 AVCR 402
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 871 CVCNGHADECN-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 913
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 999 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTC 1034
>gi|332216443|ref|XP_003257361.1| PREDICTED: laminin subunit beta-2 [Nomascus leucogenys]
Length = 1678
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 345 RKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
C+
Sbjct: 405 AVCR 408
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 757 CVCNGHADECN-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 799
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 885 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTC 920
>gi|308478231|ref|XP_003101327.1| hypothetical protein CRE_13469 [Caenorhabditis remanei]
gi|308263228|gb|EFP07181.1| hypothetical protein CRE_13469 [Caenorhabditis remanei]
Length = 1815
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA +C F+ +Y+ SG SGGVC C H T G++C CK YYRDP R I
Sbjct: 348 CNCNRHALRCHFDRAVYEASGFVSGGVCDDCMHNTQGKNCEQCKPFYYRDPRRTIDDPHV 407
Query: 95 C 95
C
Sbjct: 408 C 408
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
TC CN+HA C + G C++CR T G +C C++GYY DP
Sbjct: 877 TCQCNDHANICD-----------QTSGACIECRDLTTGHYCDRCQDGYYGDP 917
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 57 SSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
++ G CL+C H T G C +C +GYY D R C ++
Sbjct: 1006 AATGECLKCLHHTEGAQCEHCVDGYYGDAKLKTCQRCVCNEL 1047
>gi|302565330|ref|NP_001181397.1| laminin subunit gamma-1 precursor [Macaca mulatta]
gi|355559646|gb|EHH16374.1| hypothetical protein EGK_11646 [Macaca mulatta]
gi|384946998|gb|AFI37104.1| laminin subunit beta-2 precursor [Macaca mulatta]
Length = 1798
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 345 RKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
C+
Sbjct: 405 AVCR 408
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 877 CVCNGHADECD-----------THTGACLGCRDHTGGEHCERCIAGFHGDPQLP 919
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 1005 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTC 1040
>gi|307180901|gb|EFN68709.1| Laminin subunit beta-1 [Camponotus floridanus]
Length = 2183
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNH C F+ +Y+ SGR SGGVC C+H T G++C CK YY D ++ I+ +A
Sbjct: 749 CNCNNHTTSCHFDEAVYERSGRVSGGVCDDCQHNTRGQNCEQCKPFYYHDMTKFISDPEA 808
Query: 95 CK 96
C+
Sbjct: 809 CQ 810
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G C+ CR FT G +C C + +Y DP
Sbjct: 1275 QRCECNGHADSCD-----------SKTGACINCRDFTTGHNCDRCVDDFYGDP 1316
>gi|119603832|gb|EAW83426.1| laminin, beta 4, isoform CRA_b [Homo sapiens]
Length = 1610
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 288 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 347
Query: 94 AC 95
AC
Sbjct: 348 AC 349
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPS 86
G C C FT GR+C C +GYY +PS
Sbjct: 834 GSCFNCGGFTTGRNCERCIDGYYGNPS 860
>gi|426357539|ref|XP_004046095.1| PREDICTED: laminin subunit beta-4 [Gorilla gorilla gorilla]
Length = 1761
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C CN A C G C C FT GR+C C +GYY +PS
Sbjct: 863 CPCNGFAELCD-----------PETGSCFNCGGFTTGRNCERCIDGYYGNPS 903
>gi|440891371|gb|ELR45100.1| Laminin subunit beta-1, partial [Bos grunniens mutus]
Length = 1799
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 348 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPSL 407
Query: 95 CKK 97
C++
Sbjct: 408 CEQ 410
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G CL C+ +T G +C C GYY DP
Sbjct: 878 QPCQCNGHADDCD-----------SVTGECLSCQDYTTGHNCERCLAGYYGDP 919
>gi|332868303|ref|XP_519311.3| PREDICTED: laminin subunit beta-4 [Pan troglodytes]
Length = 1761
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C CN A C G C C FT GR+C C +GYY +PS
Sbjct: 863 CPCNGFAELCD-----------PETGSCFNCGGFTTGRNCERCIDGYYGNPS 903
>gi|119603831|gb|EAW83425.1| laminin, beta 4, isoform CRA_a [Homo sapiens]
Length = 1615
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 288 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 347
Query: 94 AC 95
AC
Sbjct: 348 AC 349
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPS 86
G C C FT GR+C C +GYY +PS
Sbjct: 839 GSCFNCGGFTTGRNCERCIDGYYGNPS 865
>gi|4003503|gb|AAC95123.1| laminin beta-4 chain precursor [Homo sapiens]
Length = 1761
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPS 86
G C C FT GR+C C +GYY +PS
Sbjct: 877 GSCFNCGGFTTGRNCERCIDGYYGNPS 903
>gi|219841848|gb|AAI44592.1| Laminin, beta 4 [Homo sapiens]
Length = 1761
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPS 86
G C C FT GR+C C +GYY +PS
Sbjct: 877 GSCFNCGGFTTGRNCERCIDGYYGNPS 903
>gi|143770880|ref|NP_031382.2| laminin subunit beta-4 precursor [Homo sapiens]
gi|162416049|sp|A4D0S4.1|LAMB4_HUMAN RecName: Full=Laminin subunit beta-4; AltName: Full=Laminin
beta-1-related protein; Flags: Precursor
gi|51095144|gb|EAL24387.1| laminin, beta 4 [Homo sapiens]
gi|187954525|gb|AAI40805.1| Laminin, beta 4 [Homo sapiens]
Length = 1761
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPS 86
G C C FT GR+C C +GYY +PS
Sbjct: 877 GSCFNCGGFTTGRNCERCIDGYYGNPS 903
>gi|397479947|ref|XP_003811261.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-4 [Pan
paniscus]
Length = 1761
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
>gi|330688474|ref|NP_001193448.1| laminin subunit beta-1 precursor [Bos taurus]
Length = 1786
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPSL 394
Query: 95 CKK 97
C++
Sbjct: 395 CEQ 397
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------SVTGECLSCQDYTTGHNCERCLAGYYGDP 906
>gi|6651382|gb|AAF22284.1|AF172277_3 laminin beta 1 related protein [Homo sapiens]
Length = 761
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 319 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 378
Query: 94 ACKK 97
AC +
Sbjct: 379 ACIR 382
>gi|296488520|tpg|DAA30633.1| TPA: laminin, beta 1 [Bos taurus]
Length = 1792
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPSL 394
Query: 95 CKK 97
C++
Sbjct: 395 CEQ 397
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------SVTGECLSCQDYTTGHNCERCLAGYYGDP 906
>gi|313243973|emb|CBY14851.1| unnamed protein product [Oikopleura dioica]
Length = 1847
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C HA +C F+ ++Y+ + +SGGVC QC+H T GR C C EGYY+DP + I +
Sbjct: 336 CECYGHATECHFDPDVYEATDSTSGGVCEQCKHNTEGRMCERCIEGYYQDPLKNINDPEI 395
Query: 95 C 95
C
Sbjct: 396 C 396
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C CN HA +C S G CL C H T G +C C +GYY DP+
Sbjct: 880 CECNGHANECD-----------SVSGECLSCAHDTTGANCERCADGYYGDPT 920
>gi|291391313|ref|XP_002712162.1| PREDICTED: laminin, beta 1 [Oryctolagus cuniculus]
Length = 1744
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 332 CNCNEHSGSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNV 391
Query: 95 CKK 97
C++
Sbjct: 392 CER 394
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 823 QPCQCNGHADDCDL-----------VTGQCLGCQDYTTGHNCERCLAGYYGDP 864
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 20 KKFRCSSRDRIFFQTCNCNNHARKCR----FNMELYKLSGRSSGGVCLQCRHFTAGRHCH 75
+K+ + D + C C HA +C FN E+ + G CL CRH T G +C
Sbjct: 253 EKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVH----GHCL-CRHNTKGLNCE 307
Query: 76 YCKEGYYRDPSRPITHR--KACKK 97
C + Y+ P RP R ACKK
Sbjct: 308 LCMDFYHDLPWRPAEGRNSNACKK 331
>gi|426249561|ref|XP_004018518.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-2 [Ovis aries]
Length = 1797
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ HA C F+M +Y SG SGGVC C+H TAGR C C+ +YRDP++ +
Sbjct: 349 KKCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRQCELCRPFFYRDPTKDLRDP 408
Query: 93 KACK 96
C+
Sbjct: 409 AVCR 412
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL C H T G C +CK G++ +R HR C
Sbjct: 1004 GQCLHCLHHTEGPRCAHCKPGFHGQAARQSCHRCTC 1039
>gi|148744318|gb|AAI42620.1| LAMB4 protein [Homo sapiens]
Length = 772
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
>gi|149728671|ref|XP_001498255.1| PREDICTED: laminin subunit beta-2 [Equus caballus]
Length = 1801
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ HA C F+M +Y SG SGGVC C+H TAG HC C+ +YRDP++ +
Sbjct: 348 RKCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGHHCELCRPFFYRDPTKDLRDP 407
Query: 93 KACK 96
C+
Sbjct: 408 AVCR 411
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 11/56 (19%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CN HA +C + G CL CR T G HC C G+Y DP P
Sbjct: 878 QPCVCNGHADECD-----------THTGTCLGCRDHTGGEHCERCIAGFYGDPRLP 922
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC +CK G++ +R HR C
Sbjct: 1008 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTC 1043
>gi|395818874|ref|XP_003782837.1| PREDICTED: laminin subunit beta-1 [Otolemur garnettii]
Length = 1764
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 36/63 (57%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR C CK YY+ P R I
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRSCELCKPFYYQHPERDIRDPNV 394
Query: 95 CKK 97
C+
Sbjct: 395 CEP 397
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------SVTGECLSCQDYTTGHNCERCLAGYYGDP 906
>gi|403257028|ref|XP_003921140.1| PREDICTED: laminin subunit beta-4 [Saimiri boliviensis boliviensis]
Length = 1761
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN H+ +C F+ Y SG SGGVC C+H T G+HCH C+ +YRDP + I+
Sbjct: 331 SCSCNGHSSRCHFDRTAYVASGGLSGGVCEDCQHNTEGQHCHRCRPLFYRDPLKAISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C CN A C G C CR FT GR+C C +GYY +PS
Sbjct: 863 CPCNGFAELCD-----------PQTGSCFNCRGFTTGRNCERCIDGYYGNPS 903
>gi|345323689|ref|XP_001506606.2| PREDICTED: laminin subunit beta-2 [Ornithorhynchus anatinus]
Length = 1813
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H+R C F+M ++ SG SGGVC C+H T G+HC C+ YYRDP + A
Sbjct: 388 CECNQHSRSCHFDMAVFLASGNVSGGVCDGCQHNTMGQHCQLCRPFYYRDPRADLRSPVA 447
Query: 95 CK 96
C+
Sbjct: 448 CR 449
>gi|344270859|ref|XP_003407259.1| PREDICTED: laminin subunit beta-1 [Loxodonta africana]
Length = 1786
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSGTCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNT 394
Query: 95 CKK 97
C++
Sbjct: 395 CER 397
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------SVTGECLSCQDYTTGHNCERCLAGYYGDP 906
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 20 KKFRCSSRDRIFFQTCNCNNHARKCR----FNMELYKLSGRSSGGVCLQCRHFTAGRHCH 75
+K+ + D + C C HA +C FN E+ + G C+ CRH T G +C
Sbjct: 256 EKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVH----GHCM-CRHNTKGLNCE 310
Query: 76 YCKEGYYRDPSRPITHR--KACKK 97
C + Y+ P RP R ACKK
Sbjct: 311 LCMDFYHDLPWRPAEGRNSNACKK 334
>gi|329663665|ref|NP_001039712.2| laminin subunit beta-2 precursor [Bos taurus]
Length = 1802
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ HA C F+M +Y SG SGGVC C+H TAGR C C+ +YRDP++ +
Sbjct: 349 KKCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRQCELCRPFFYRDPTKDLRDP 408
Query: 93 KACK 96
C+
Sbjct: 409 AVCR 412
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C C+ HA +C N G CL CR T G HC C G++ DP P
Sbjct: 881 CVCHGHADECDPNT-----------GTCLGCRDHTGGEHCERCIAGFHGDPRLP 923
>gi|296474911|tpg|DAA17026.1| TPA: laminin, beta 2 (laminin S) [Bos taurus]
Length = 1802
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ HA C F+M +Y SG SGGVC C+H TAGR C C+ +YRDP++ +
Sbjct: 349 KKCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRQCELCRPFFYRDPTKDLRDP 408
Query: 93 KACK 96
C+
Sbjct: 409 AVCR 412
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C C+ HA +C N G CL CR T G HC C G++ DP P
Sbjct: 881 CVCHGHADECDPNT-----------GTCLGCRDHTGGEHCERCIAGFHGDPRLP 923
>gi|440893720|gb|ELR46390.1| Laminin subunit beta-2 [Bos grunniens mutus]
Length = 1802
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ HA C F+M +Y SG SGGVC C+H TAGR C C+ +YRDP++ +
Sbjct: 349 KKCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRQCELCRPFFYRDPTKDLRDP 408
Query: 93 KACK 96
C+
Sbjct: 409 AVCR 412
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C C+ HA +C N G CL CR T G HC C G++ DP P
Sbjct: 881 CVCHGHADECDPNT-----------GTCLGCRDHTGGEHCERCIAGFHGDPRLP 923
>gi|62956009|gb|AAY23351.1| netrin 2 [Schmidtea mediterranea]
Length = 482
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C NH+ KC F+M +YK + GGVCL+C+H T G C C +YRD ++P+TH +A
Sbjct: 355 CQCYNHSDKCMFSMGMYKQTRGQHGGVCLECKHNTEGHACDECAAFHYRDITKPVTHPQA 414
Query: 95 C 95
C
Sbjct: 415 C 415
>gi|339895924|ref|NP_001229974.1| laminin subunit beta-2 precursor [Danio rerio]
Length = 1782
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+M +Y +G SGGVC C H T G +C CK YY+DP+R I
Sbjct: 331 CNCNGHSNQCHFDMAVYLATGNISGGVCDNCLHNTMGSNCESCKPFYYQDPTRDIRDPGV 390
Query: 95 C 95
C
Sbjct: 391 C 391
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN HA +C G CL CR TAG C C GYY +P
Sbjct: 861 CQCNGHADECH-----------QRTGACLNCRSNTAGDKCERCANGYYGNP 900
>gi|363727488|ref|XP_415943.3| PREDICTED: laminin subunit beta-1 [Gallus gallus]
Length = 1785
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+M +Y +G +SGGVC C+H T GR+C CK Y++ P R +
Sbjct: 333 CNCNGHSTQCHFDMAVYMATGNTSGGVCDDCQHNTVGRNCEQCKPFYFQHPERDLRDPDV 392
Query: 95 CKK 97
C+
Sbjct: 393 CEP 395
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C+CN HA C G CL CR TAG +C C+ GYY DP
Sbjct: 863 QPCHCNGHADDCS-----------PYTGECLHCRDHTAGPNCERCEAGYYGDP 904
>gi|449278842|gb|EMC86581.1| Laminin subunit beta-1 [Columba livia]
Length = 1718
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+M +Y +G +SGGVC C+H T GR+C CK Y++ P R +
Sbjct: 272 CNCNGHSSQCHFDMAVYMTTGNTSGGVCDDCQHNTIGRNCEQCKPFYFQHPERDLRDPDV 331
Query: 95 CK 96
C+
Sbjct: 332 CE 333
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDP 85
G CL CR TAG +C C+ GYY DP
Sbjct: 812 GECLSCRDHTAGHNCERCQAGYYGDP 837
>gi|426227599|ref|XP_004007905.1| PREDICTED: laminin subunit beta-1 [Ovis aries]
Length = 1786
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R +
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDVRDPSL 394
Query: 95 CKK 97
C++
Sbjct: 395 CEQ 397
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------SETGECLSCQDYTTGHNCERCLAGYYGDP 906
>gi|355747928|gb|EHH52425.1| hypothetical protein EGM_12863 [Macaca fascicularis]
Length = 1810
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 359 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 418
Query: 95 CKK 97
C++
Sbjct: 419 CER 421
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 889 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 930
>gi|355560911|gb|EHH17597.1| hypothetical protein EGK_14036 [Macaca mulatta]
Length = 1810
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 359 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 418
Query: 95 CKK 97
C++
Sbjct: 419 CER 421
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 889 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 930
>gi|384946996|gb|AFI37103.1| laminin subunit beta-1 precursor [Macaca mulatta]
Length = 1786
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 95 CKK 97
C++
Sbjct: 395 CER 397
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 906
>gi|327271443|ref|XP_003220497.1| PREDICTED: laminin subunit beta-3-like [Anolis carolinensis]
Length = 1196
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ KC F+ +Y+ +G SGGVC C+H TAG HC +CK ++R+ + H +A
Sbjct: 343 CNCNGHSNKCHFDPAVYEANGGVSGGVCEDCQHNTAGEHCEHCKTNFFRNQRFDLGHPEA 402
Query: 95 C 95
C
Sbjct: 403 C 403
>gi|297289124|ref|XP_001090393.2| PREDICTED: laminin subunit beta-1 [Macaca mulatta]
Length = 1786
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 95 CKK 97
C++
Sbjct: 395 CER 397
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 906
>gi|410920177|ref|XP_003973560.1| PREDICTED: netrin-4-like [Takifugu rubripes]
Length = 627
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C C+ HA C F+ + SG +SGGVC C+H T GR C C+ GY+R PS P++
Sbjct: 326 QKCQCHGHADSCHFSERAWLSSGGTSGGVCHNCKHNTVGRRCQRCRHGYHRHPSLPLSSP 385
Query: 93 KACKK 97
ACK+
Sbjct: 386 LACKR 390
>gi|402864545|ref|XP_003896520.1| PREDICTED: laminin subunit beta-1 [Papio anubis]
Length = 1786
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 95 CKK 97
C++
Sbjct: 395 CER 397
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 906
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 20 KKFRCSSRDRIFFQTCNCNNHARKCR----FNMELYKLSGRSSGGVCLQCRHFTAGRHCH 75
+K+ + D + C C HA +C FN E+ + G C+ CRH T G +C
Sbjct: 256 EKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVH----GHCM-CRHNTKGLNCE 310
Query: 76 YCKEGYYRDPSRPITHR--KACKK 97
C + Y+ P RP R ACKK
Sbjct: 311 LCMDFYHDLPWRPAEGRNSNACKK 334
>gi|395818435|ref|XP_003782634.1| PREDICTED: laminin subunit beta-4 [Otolemur garnettii]
Length = 1757
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H+ +C F++ Y SG SGGVC C H T G+HC C+ G+YRDP R + A
Sbjct: 331 CRCNGHSDRCHFDLSAYLASGSRSGGVCEDCGHHTEGQHCDRCRPGFYRDPRRAASDPHA 390
Query: 95 C 95
C
Sbjct: 391 C 391
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C CN A C G C CR FT GR+C C +GYY +PS
Sbjct: 862 CPCNGFAELCD-----------PETGSCFNCRGFTTGRNCERCIDGYYGNPS 902
>gi|402586326|gb|EJW80264.1| laminin beta-2 chain, partial [Wuchereria bancrofti]
Length = 490
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+ HA +C F+ +Y+ SG SGGVC +C H T G++C CK +YR+P RPIT
Sbjct: 318 CECSGHAARCHFDRAVYQASGFVSGGVCDECLHNTQGKNCEQCKPYFYRNPDRPITDPYV 377
Query: 95 C 95
C
Sbjct: 378 C 378
>gi|441639931|ref|XP_003268180.2| PREDICTED: laminin subunit beta-1 isoform 1 [Nomascus leucogenys]
Length = 1797
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 346 CNCNEHSSSCHFDMAVYMATGNISGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 405
Query: 95 CKK 97
C++
Sbjct: 406 CER 408
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 876 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 917
>gi|449480953|ref|XP_004177243.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-1 [Taeniopygia
guttata]
Length = 2043
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+M +Y +G +SGGVC C+H T GR+C CK Y++ P R +
Sbjct: 592 CNCNGHSSQCHFDMAVYMTTGNTSGGVCDDCQHNTMGRNCEQCKPFYFQHPERDLRDPDV 651
Query: 95 CKK 97
C+
Sbjct: 652 CEP 654
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C+CN HA C G CL CR TAG +C C+ GYY DP
Sbjct: 1122 QPCHCNGHADDCN-----------PYTGECLSCRDHTAGHNCERCQAGYYGDP 1163
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
Q C CNN+ + R+ G C++C + T G +CH C+EGYY
Sbjct: 1231 QPCQCNNNID----TTDPEACDKRT--GACMKCLYHTEGENCHLCREGYY 1274
>gi|297671356|ref|XP_002813805.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-2 [Pongo
abelii]
Length = 1798
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 347 CECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPLFYRDPNKDLRDPAV 406
Query: 95 CKK 97
C+
Sbjct: 407 CRS 409
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 877 CVCNGHADECNTHT-----------GACLGCRDHTGGEHCERCIAGFHGDPRLP 919
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
G CL+C H T G HC +CK G++ +R HR C +
Sbjct: 1005 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTCNLL 1043
>gi|194390720|dbj|BAG62119.1| unnamed protein product [Homo sapiens]
Length = 1101
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN+H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
>gi|449276683|gb|EMC85115.1| Netrin-4, partial [Columba livia]
Length = 601
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C++HA C F++ ++ SG+ SGGVC C+H T G C CK GYYRD +P++ +
Sbjct: 298 CRCHSHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMSSPEV 357
Query: 95 CKK 97
CK
Sbjct: 358 CKP 360
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 28 DRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGV---CLQCRHFTAGRHCHYCKEGYYRD 84
D I +C CN HA +C EL +G + V C+ CRH TAG HC C Y
Sbjct: 226 DLIIRGSCFCNGHAEEC----ELANRTGVTENTVHGKCV-CRHNTAGDHCEKCAPLYNDQ 280
Query: 85 PSRP 88
P +P
Sbjct: 281 PWKP 284
>gi|380805299|gb|AFE74525.1| laminin subunit beta-2 precursor, partial [Macaca mulatta]
Length = 484
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+ H C F+M +Y SG SGGVC C+H TAGRHC C+ +YRDP++ +
Sbjct: 328 CECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPAV 387
Query: 95 CKK 97
C+
Sbjct: 388 CRS 390
>gi|307210677|gb|EFN87100.1| Laminin subunit beta-1 [Harpegnathos saltator]
Length = 1700
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCNNH C F+ +Y SGR SGGVC C+H T G++C CK +Y D ++ I+ A
Sbjct: 290 CNCNNHTTSCHFDEAVYDRSGRVSGGVCDDCQHNTRGQNCEQCKPFFYHDVTKDISDSAA 349
Query: 95 CK 96
C+
Sbjct: 350 CQ 351
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G C+ CR +T G +C C + +Y DP
Sbjct: 791 QRCECNGHADSCD-----------PKTGACINCRDYTTGHNCDRCIDTFYGDP 832
>gi|395738869|ref|XP_002818388.2| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-1 [Pongo
abelii]
Length = 1936
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 485 CNCNEHSSSCHFDMAVYLATGNISGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 544
Query: 95 CKK 97
C++
Sbjct: 545 CER 547
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 1015 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 1056
>gi|326928023|ref|XP_003210184.1| PREDICTED: laminin subunit beta-1-like [Meleagris gallopavo]
Length = 1501
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN H+R+C F+M ++ +G +SG VC C+H T GR CH CK YYR P I A
Sbjct: 325 CDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRRCHLCKPFYYRHPRSDIRAPTA 384
Query: 95 CKKV 98
C +
Sbjct: 385 CPTM 388
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN HA +C G CL CR +T GRHC C++GYY DP
Sbjct: 805 PCQCNGHAEECDLRT-----------GSCLHCRDYTTGRHCERCQDGYYGDP 845
>gi|308453155|ref|XP_003089323.1| CRE-LAM-1 protein [Caenorhabditis remanei]
gi|308241157|gb|EFO85109.1| CRE-LAM-1 protein [Caenorhabditis remanei]
Length = 1264
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA +C F+ +Y+ SG SGGVC C H T G++C CK YYRDP R I
Sbjct: 348 CNCNRHALRCHFDRAVYEASGFVSGGVCDDCMHNTQGKNCEQCKPFYYRDPRRTIDDPHV 407
Query: 95 C 95
C
Sbjct: 408 C 408
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
TC CN+HA C + G C++CR T G +C C++GYY DP
Sbjct: 877 TCQCNDHANICD-----------QTSGACIECRDLTTGHYCDRCQDGYYGDP 917
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 44 CRFNMEL-YKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
C N+++ + S ++ G CL+C H T G C +C +GYY D R C ++
Sbjct: 992 CNGNIDMSMEGSCDAATGECLKCLHHTEGAQCEHCVDGYYGDAKLKTCQRCVCNEL 1047
>gi|332868295|ref|XP_001165667.2| PREDICTED: laminin subunit beta-1 isoform 6 [Pan troglodytes]
gi|410267982|gb|JAA21957.1| laminin, beta 1 [Pan troglodytes]
gi|410305334|gb|JAA31267.1| laminin, beta 1 [Pan troglodytes]
Length = 1786
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 95 CKK 97
C++
Sbjct: 395 CER 397
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 906
>gi|194209474|ref|XP_001915354.1| PREDICTED: laminin subunit beta-1 [Equus caballus]
Length = 1711
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK Y++ P R I
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 394
Query: 95 CKK 97
C++
Sbjct: 395 CEQ 397
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C + G C+ C+ +T G +C C GYY DP
Sbjct: 790 QPCQCNGHADDCD-----------TVTGECVSCQDYTTGHNCERCLAGYYGDP 831
>gi|410338567|gb|JAA38230.1| laminin, beta 1 [Pan troglodytes]
Length = 1786
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 95 CKK 97
C++
Sbjct: 395 CER 397
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 906
>gi|341895736|gb|EGT51671.1| hypothetical protein CAEBREN_05144 [Caenorhabditis brenneri]
Length = 1793
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 37/61 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA +C F+ +Y+ SG SGGVC C H T G++C CK +YRDP R I
Sbjct: 347 CNCNRHALRCHFDRAVYEASGFVSGGVCDDCMHNTQGKNCEQCKPFFYRDPRRTIDDPHV 406
Query: 95 C 95
C
Sbjct: 407 C 407
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
TC CN+HA C + G C++CR T G +C C++GYY DP
Sbjct: 876 TCQCNDHANICD-----------QATGACIECRDLTTGHYCDRCQDGYYGDP 916
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 57 SSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
++ G CL+C H T G C +C +GYY D R C ++
Sbjct: 1005 AATGECLKCLHHTEGPQCEHCVDGYYGDAKLKTCQRCVCNEL 1046
>gi|397479940|ref|XP_003811258.1| PREDICTED: laminin subunit beta-1 [Pan paniscus]
Length = 1786
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 95 CKK 97
C++
Sbjct: 395 CER 397
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 906
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 20 KKFRCSSRDRIFFQTCNCNNHARKCR----FNMELYKLSGRSSGGVCLQCRHFTAGRHCH 75
+K+ + D + C C HA +C FN E+ + G C+ CRH T G +C
Sbjct: 256 EKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVH----GHCM-CRHNTKGLNCE 310
Query: 76 YCKEGYYRDPSRPITHR--KACKK 97
C + Y+ P RP R ACKK
Sbjct: 311 LCMDFYHDLPWRPAEGRNSNACKK 334
>gi|119603829|gb|EAW83423.1| laminin, beta 1, isoform CRA_a [Homo sapiens]
Length = 1810
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 359 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 418
Query: 95 CKK 97
C++
Sbjct: 419 CER 421
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 889 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 930
>gi|395539189|ref|XP_003771555.1| PREDICTED: laminin subunit beta-1 [Sarcophilus harrisii]
Length = 1786
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSGSCHFDMAVYLATGNISGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNI 394
Query: 95 CK 96
C+
Sbjct: 395 CE 396
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C +SG C C+ +T+G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD------PISGE-----CFGCQDYTSGHNCERCLPGYYGDP 906
>gi|186837|gb|AAA59482.1| laminin B1 [Homo sapiens]
gi|186876|gb|AAA59485.1| laminin B1 [Homo sapiens]
gi|186913|gb|AAA59486.1| laminin B1 [Homo sapiens]
gi|168275776|dbj|BAG10608.1| laminin subunit beta-1 precursor [synthetic construct]
Length = 1786
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 95 CKK 97
C++
Sbjct: 395 CER 397
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 906
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 20 KKFRCSSRDRIFFQTCNCNNHARKCR----FNMELYKLSGRSSGGVCLQCRHFTAGRHCH 75
+K+ + D + C C HA +C FN E+ + G C+ CRH T G +C
Sbjct: 256 EKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVH----GHCM-CRHNTKGLNCE 310
Query: 76 YCKEGYYRDPSRPITHR--KACKK 97
C + Y+ P RP R ACKK
Sbjct: 311 LCMDFYHDLPWRPAEGRNSNACKK 334
>gi|167614504|ref|NP_002282.2| laminin subunit beta-1 precursor [Homo sapiens]
gi|317373377|sp|P07942.2|LAMB1_HUMAN RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin B1
chain; AltName: Full=Laminin-1 subunit beta; AltName:
Full=Laminin-10 subunit beta; AltName: Full=Laminin-12
subunit beta; AltName: Full=Laminin-2 subunit beta;
AltName: Full=Laminin-6 subunit beta; AltName:
Full=Laminin-8 subunit beta; Flags: Precursor
gi|51095145|gb|EAL24388.1| laminin, beta 1 [Homo sapiens]
gi|109731041|gb|AAI13456.1| Laminin, beta 1 [Homo sapiens]
gi|119603830|gb|EAW83424.1| laminin, beta 1, isoform CRA_b [Homo sapiens]
Length = 1786
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 394
Query: 95 CKK 97
C++
Sbjct: 395 CER 397
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 906
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 20 KKFRCSSRDRIFFQTCNCNNHARKCR----FNMELYKLSGRSSGGVCLQCRHFTAGRHCH 75
+K+ + D + C C HA +C FN E+ + G C+ CRH T G +C
Sbjct: 256 EKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVH----GHCM-CRHNTKGLNCE 310
Query: 76 YCKEGYYRDPSRPITHR--KACKK 97
C + Y+ P RP R ACKK
Sbjct: 311 LCMDFYHDLPWRPAEGRNSNACKK 334
>gi|291393661|ref|XP_002713463.1| PREDICTED: laminin, beta 2 [Oryctolagus cuniculus]
Length = 1802
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H+ +C F+M +Y SG SGGVC C+H TAGR C C+ +YRDP++ +
Sbjct: 348 RKCECHGHSHRCHFDMAVYLASGNVSGGVCDGCQHNTAGRRCELCRPFFYRDPTKDLRDP 407
Query: 93 KACK 96
C+
Sbjct: 408 AVCR 411
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 881 CVCNGHADECD-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 923
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C + T G HC +CK G++ +R HR C
Sbjct: 1009 GQCLRCLYHTEGPHCAHCKPGFHGQAARQSCHRCTC 1044
>gi|296209973|ref|XP_002751793.1| PREDICTED: laminin subunit beta-1 isoform 1 [Callithrix jacchus]
gi|390466857|ref|XP_003733662.1| PREDICTED: laminin subunit beta-1 isoform 2 [Callithrix jacchus]
Length = 1788
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR C CK YY+ P R I
Sbjct: 337 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRSCEQCKPFYYQHPERDIRDPNF 396
Query: 95 CKK 97
C++
Sbjct: 397 CER 399
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 867 QPCQCNGHAEDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 908
>gi|189525349|ref|XP_688995.3| PREDICTED: netrin-4-like [Danio rerio]
Length = 642
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C C+ H+ C F+ ++ +G SGGVC C+H TAGR C C+ GY+R P+RP+
Sbjct: 339 QKCECHGHSESCHFSQRVWLSTGGISGGVCDHCQHNTAGRRCQRCRPGYHRHPARPLNSP 398
Query: 93 KACKK 97
AC +
Sbjct: 399 HACTR 403
>gi|86821711|gb|AAI05437.1| Laminin, gamma 1 (formerly LAMB2) [Bos taurus]
Length = 470
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+ HA C F+M +Y SG SGGVC C+H TAGR C C+ +YRDP++ +
Sbjct: 351 CECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRQCELCRPFFYRDPTKDLRDPAV 410
Query: 95 CKK 97
C+
Sbjct: 411 CRS 413
>gi|194765663|ref|XP_001964946.1| GF21809 [Drosophila ananassae]
gi|190617556|gb|EDV33080.1| GF21809 [Drosophila ananassae]
Length = 1788
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN+HA C F+ ++ SG SGGVC C H T G+HC CK +YRDP + I A
Sbjct: 356 CECNDHAVSCHFDEAVFAASGNVSGGVCDNCMHNTQGQHCEECKPFFYRDPEQDIRSEFA 415
Query: 95 CK 96
C+
Sbjct: 416 CQ 417
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN HA +C G CL+C+ FTAG C C EGYY +P
Sbjct: 884 ACQCNGHAAQCD-----------PITGTCLECQDFTAGYSCDSCLEGYYGNP 924
>gi|410952082|ref|XP_003982717.1| PREDICTED: laminin subunit beta-4 [Felis catus]
Length = 1812
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C CN H+ +C F+M Y SG SGGVC C+H T G+HC C+ +YRDP R ++
Sbjct: 396 ACRCNGHSDRCHFDMTAYLASGGRSGGVCEDCQHHTEGQHCDRCRPLFYRDPLRAMSDPY 455
Query: 94 AC 95
AC
Sbjct: 456 AC 457
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPS 86
G C C FT GR+C C +GYY DP
Sbjct: 942 GSCFNCGGFTTGRNCERCIDGYYGDPP 968
>gi|410898908|ref|XP_003962939.1| PREDICTED: laminin subunit beta-2-like [Takifugu rubripes]
Length = 1778
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y SG SGGVC C+H T G C CK YY+DP++ I
Sbjct: 329 CNCNGHSNICHFDMAVYLASGNISGGVCDDCQHNTMGYQCDMCKPFYYKDPAKDIRDPHV 388
Query: 95 C 95
C
Sbjct: 389 C 389
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 11/61 (18%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H +C G C++CR T G C C +GYY +P+ + H
Sbjct: 860 CQCNGHTDECD-----------QRTGACIRCRDNTGGDKCERCADGYYGNPASGLCHPCP 908
Query: 95 C 95
C
Sbjct: 909 C 909
>gi|313221742|emb|CBY38837.1| unnamed protein product [Oikopleura dioica]
Length = 1258
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C HA +C F+ ++Y+ + +SGGVC QC+H T GR C C EGYY+DP + I +
Sbjct: 336 CECYGHATECHFDPDVYEATDSTSGGVCEQCKHNTEGRMCERCIEGYYQDPLKNINDPEI 395
Query: 95 C 95
C
Sbjct: 396 C 396
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C CN HA +C S G CL C H T G +C C +GYY DP+
Sbjct: 880 CECNGHANECD-----------SVSGECLSCAHDTTGANCERCADGYYGDPT 920
>gi|190339196|gb|AAI63582.1| Ntn4 protein [Danio rerio]
Length = 593
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA C F+ ++ SG+ GGVC C H T G+HC +C+ G+YRDP +P T +
Sbjct: 317 CKCNGHAESCHFDESIWLRSGQQHGGVC-DCLHNTTGQHCQHCQSGFYRDPEKPSTAPDS 375
Query: 95 CKK 97
C
Sbjct: 376 CTP 378
>gi|335295652|ref|XP_003130317.2| PREDICTED: laminin subunit beta-1 [Sus scrofa]
Length = 1786
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R +
Sbjct: 335 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCERCKPFYYQHPERDVRDPNL 394
Query: 95 CKK 97
C+
Sbjct: 395 CEP 397
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 11/52 (21%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
Q C CN HA C S G C C+ +T G +C C GYY D
Sbjct: 865 QPCQCNGHAEDCD-----------SVTGECSSCQDYTTGHNCERCLAGYYGD 905
>gi|126340557|ref|XP_001363841.1| PREDICTED: laminin subunit beta-1 [Monodelphis domestica]
Length = 1786
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSGSCHFDMAVYLATGNISGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNI 394
Query: 95 C 95
C
Sbjct: 395 C 395
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C +SG C C+ +T+G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD------PISGE-----CFGCQDYTSGHNCERCLPGYYGDP 906
>gi|345782840|ref|XP_540379.3| PREDICTED: laminin subunit beta-4 [Canis lupus familiaris]
Length = 1747
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C CN+H+ +C F+M Y SG SGGVC CRH T G+HC C+ +YRDP + ++
Sbjct: 331 ACRCNSHSDRCHFDMTAYLSSGGRSGGVCEACRHNTEGQHCDRCRPLFYRDPLKAMSDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
>gi|242004311|ref|XP_002423043.1| Laminin beta-1 chain precursor, putative [Pediculus humanus
corporis]
gi|212505974|gb|EEB10305.1| Laminin beta-1 chain precursor, putative [Pediculus humanus
corporis]
Length = 1767
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN+HA C F+ +++L+G +GGVC C+H T GR+C C YY DP I A
Sbjct: 323 CNCNSHATSCHFDSAVFELTGNVTGGVCDNCQHNTQGRNCEECIPFYYHDPGYDIQDPNA 382
Query: 95 CK 96
C+
Sbjct: 383 CQ 384
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C GVC+ CR T G C C EGYY DP
Sbjct: 849 QRCECNGHADTCDLKT-----------GVCISCRDATFGDRCDRCIEGYYGDP 890
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Query: 33 QTCNCNNHARKCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
Q CNC+N N+++ + G C+QC T G HC CKEGYY D
Sbjct: 958 QACNCSN-------NVDITRPGNCDPKTGHCIQCLFNTEGEHCEKCKEGYYGD 1003
>gi|301755689|ref|XP_002913698.1| PREDICTED: laminin subunit beta-4-like [Ailuropoda melanoleuca]
Length = 1673
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C+CN+H+ +C F+M Y SG SGGVC CRH T G+HC C+ +YRDP + ++
Sbjct: 331 ACHCNSHSDRCHFDMRAYVRSGGRSGGVCEDCRHNTEGQHCDRCRPLFYRDPLKAMSDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
>gi|392898988|ref|NP_500734.3| Protein LAM-1 [Caenorhabditis elegans]
gi|379656937|emb|CCD65512.2| Protein LAM-1 [Caenorhabditis elegans]
Length = 1790
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 37/61 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA +C F+ +Y+ SG SGGVC C H T G++C CK +YRDP R I
Sbjct: 344 CNCNRHALRCHFDRAVYESSGFVSGGVCDDCMHNTQGKNCEQCKPFFYRDPRRTIDDPHV 403
Query: 95 C 95
C
Sbjct: 404 C 404
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
TC CN+HA C S G C++CR T G +C C++GYY DP
Sbjct: 873 TCQCNDHANICD-----------QSSGACIECRDLTTGHYCDRCQDGYYGDP 913
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 44 CRFNMEL-YKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
C N+++ + S ++ G CL+C H T G C +C +GYY D R C ++
Sbjct: 988 CNGNIDMAMEGSCDAATGECLKCLHHTEGAQCEHCVDGYYGDAKLKTCQRCVCNEL 1043
>gi|395856423|ref|XP_003800628.1| PREDICTED: laminin subunit beta-2 [Otolemur garnettii]
Length = 1793
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAG HC C+ +YRDP++ +
Sbjct: 340 RKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGHHCELCRPFFYRDPTKDLRDP 399
Query: 93 KACK 96
C+
Sbjct: 400 AVCR 403
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G+Y DP P
Sbjct: 872 CVCNGHADECD-----------THTGACLGCRDHTGGEHCERCIAGFYGDPRLP 914
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
G CL+C H T G HC +CK G++ ++ HR C ++
Sbjct: 1000 GQCLRCLHHTEGPHCAHCKPGFHGQAAQQSCHRCTCNRL 1038
>gi|403257537|ref|XP_003921367.1| PREDICTED: laminin subunit beta-1 [Saimiri boliviensis boliviensis]
Length = 1732
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR C CK YY+ P R +
Sbjct: 281 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRSCEQCKPFYYQHPERDVRDPNF 340
Query: 95 CKK 97
C++
Sbjct: 341 CER 343
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 811 QPCQCNGHAEDCD-----------PVTGECLNCQDYTVGHNCERCLAGYYGDP 852
>gi|444526052|gb|ELV14261.1| Laminin subunit beta-4 [Tupaia chinensis]
Length = 971
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C CN H+ +C F+ +Y SG SGGVC CRH T G+HC C+ +YR+P + I+
Sbjct: 191 SCTCNGHSDRCHFDPTVYLASGDLSGGVCEDCRHNTEGQHCDRCRPLFYRNPLKAISDPY 250
Query: 94 AC 95
AC
Sbjct: 251 AC 252
>gi|417413964|gb|JAA53291.1| Putative netrin axonal chemotropic factor, partial [Desmodus
rotundus]
Length = 1791
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGR C C+ +YRDP++ +
Sbjct: 338 KKCECHGHTHSCHFDMAMYLASGNVSGGVCDGCQHNTAGRRCELCRPFFYRDPTKDLRDP 397
Query: 93 KACK 96
C+
Sbjct: 398 AVCR 401
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 870 CVCNGHADECD-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 912
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G C +CK G++ +R HR C
Sbjct: 998 GQCLRCLHHTEGPRCAHCKPGFHGQAARQSCHRCTC 1033
>gi|417413968|gb|JAA53293.1| Putative netrin axonal chemotropic factor, partial [Desmodus
rotundus]
Length = 1798
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC C+H TAGR C C+ +YRDP++ +
Sbjct: 345 KKCECHGHTHSCHFDMAMYLASGNVSGGVCDGCQHNTAGRRCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
C+
Sbjct: 405 AVCR 408
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 877 CVCNGHADECD-----------THTGACLGCRDHTGGEHCERCIAGFHGDPRLP 919
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G C +CK G++ +R HR C
Sbjct: 1005 GQCLRCLHHTEGPRCAHCKPGFHGQAARQSCHRCTC 1040
>gi|444526053|gb|ELV14262.1| Laminin subunit beta-1 [Tupaia chinensis]
Length = 1821
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR C CK YY+ P R +
Sbjct: 370 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRSCEQCKPFYYQHPERDVRDPNF 429
Query: 95 CKK 97
C++
Sbjct: 430 CER 432
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G CL C+ FT G +C C GYY DP
Sbjct: 900 QPCQCNGHADDCD-----------SVTGECLSCQDFTTGHNCERCLAGYYGDP 941
>gi|348568097|ref|XP_003469835.1| PREDICTED: laminin subunit beta-1-like [Cavia porcellus]
Length = 1790
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR C CK YY+ P R +
Sbjct: 339 CNCNEHSTSCHFDMAVFLATGNVSGGVCDDCQHNTMGRSCEQCKPFYYQHPERDVRDPNV 398
Query: 95 CKK 97
C++
Sbjct: 399 CER 401
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G CL+C+ +T G +C C GYY DP
Sbjct: 869 QPCQCNGHADDCD-----------SVTGQCLRCQDYTTGHNCERCLAGYYGDP 910
>gi|47209921|emb|CAF94661.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1051
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 3 MFEDIDGSDKESGGEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVC 62
+F D+ E G H Q C CN HAR+C F++ Y+ SGR SGGVC
Sbjct: 272 LFNDLPWRPAEEGNTH------------TCQRCECNGHARRCHFDLATYEASGRRSGGVC 319
Query: 63 LQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
C H T G C C GY +P + AC
Sbjct: 320 EDCMHHTTGPKCDRCAPGYQPNPRSQMDRPDAC 352
>gi|284005150|ref|NP_001164710.1| netrin 4 precursor [Saccoglossus kowalevskii]
gi|283464047|gb|ADB22607.1| netrin4 [Saccoglossus kowalevskii]
Length = 610
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA C F+ +L+ + +GGVC C+H T G +C C+ GYYRD ++ T A
Sbjct: 330 CECNGHADSCHFDSKLWDSTNYVTGGVCDSCKHHTTGTNCQLCESGYYRDSTKEFTAANA 389
Query: 95 CKK 97
CK+
Sbjct: 390 CKR 392
>gi|426357537|ref|XP_004046094.1| PREDICTED: laminin subunit beta-1 [Gorilla gorilla gorilla]
Length = 1786
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 335 CNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKLFYYQHPERDIRDPNF 394
Query: 95 CKK 97
C++
Sbjct: 395 CER 397
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHADDCD-----------PVTGECLNCQDYTMGHNCERCLAGYYGDP 906
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 20 KKFRCSSRDRIFFQTCNCNNHARKCR----FNMELYKLSGRSSGGVCLQCRHFTAGRHCH 75
+K+ + D + C C HA +C FN E+ + G C+ CRH T G +C
Sbjct: 256 EKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVH----GHCM-CRHNTKGLNCE 310
Query: 76 YCKEGYYRDPSRPITHR--KACKK 97
C + Y+ P RP R ACKK
Sbjct: 311 LCMDFYHDLPWRPAEGRNSNACKK 334
>gi|83415122|ref|NP_001032775.1| netrin-4 precursor [Danio rerio]
gi|62866617|gb|AAY17260.1| netrin 4 precursor [Danio rerio]
Length = 558
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA C F+ ++ SG+ GGVC C H T G+HC +C+ G+YRDP +P T +
Sbjct: 281 CKCNGHAESCHFDESVWLRSGQQHGGVC-DCLHNTTGQHCQHCQSGFYRDPKKPSTAPDS 339
Query: 95 C 95
C
Sbjct: 340 C 340
>gi|351711878|gb|EHB14797.1| Laminin subunit beta-2 [Heterocephalus glaber]
Length = 1789
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC +C+H T G HC C+ +YRDP++ +
Sbjct: 348 RKCECHGHTHSCHFDMAIYLASGNVSGGVCDRCQHNTVGHHCELCRPFFYRDPTKDLRDP 407
Query: 93 KAC 95
C
Sbjct: 408 AVC 410
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN H +C + G CL CR T G HC C G++ DP P
Sbjct: 880 CVCNGHTDECD-----------AHTGTCLSCRDHTGGEHCERCIAGFHGDPRLP 922
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 57 SSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
S G C++C H T G HC +CK G++ +R HR C
Sbjct: 1005 SHTGQCIRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTC 1043
>gi|341895521|gb|EGT51456.1| CBN-LAM-1 protein [Caenorhabditis brenneri]
Length = 1049
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 37/61 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA +C F+ +Y+ SG SGGVC C H T G++C CK +YRDP R I
Sbjct: 347 CNCNRHALRCHFDRAVYEASGFVSGGVCDDCMHNTQGKNCEQCKPFFYRDPRRTIDDPHV 406
Query: 95 C 95
C
Sbjct: 407 C 407
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
TC CN+HA C + G C++CR T G +C C++GYY DP
Sbjct: 876 TCQCNDHANICD-----------QATGACIECRDLTTGHYCDRCQDGYYGDP 916
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 44 CRFNMEL-YKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACKKV 98
C N+++ + S ++ G CL+C H T G C +C +GYY D R+ KV
Sbjct: 991 CNGNIDMSMEGSCDAATGECLKCLHHTEGPQCEHCVDGYYGDAKLKTCQRRVVSKV 1046
>gi|241812099|ref|XP_002414597.1| laminin beta 1 chain, putative [Ixodes scapularis]
gi|215508808|gb|EEC18262.1| laminin beta 1 chain, putative [Ixodes scapularis]
Length = 2084
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA +C F+ +++ SGR SGGVC CR T G +C C YY+DP R + A
Sbjct: 752 CNCNGHASRCHFDAAVWERSGRVSGGVCDDCRDNTMGLNCEQCVPFYYKDPQRDPSDPYA 811
Query: 95 CK 96
C+
Sbjct: 812 CQ 813
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C C+ HA C S G C CR FT+G HC C+ G+Y DP
Sbjct: 1276 QRCECHGHADTCD-----------SRTGHCSHCRDFTSGPHCDRCETGFYGDP 1317
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 57 SSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
S GVCL+C + T G HC CK G+Y D SR
Sbjct: 1403 SRTGVCLRCLYNTEGHHCERCKPGHYGDASR 1433
>gi|157802|gb|AAA28663.1| laminin B1 subunit precursor [Drosophila melanogaster]
Length = 1788
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN+HA C F+ ++ SG SGGVC C H T G+HC C +YRDP + IT +
Sbjct: 357 CECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERV 416
Query: 95 CK 96
C+
Sbjct: 417 CQ 418
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 43 KCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
+C N++LY G CL+C + T G HC CK+G++ D
Sbjct: 992 ECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGD 1034
>gi|17136294|ref|NP_476618.1| LanB1, isoform A [Drosophila melanogaster]
gi|24582614|ref|NP_723319.1| LanB1, isoform B [Drosophila melanogaster]
gi|160232264|sp|P11046.4|LAMB1_DROME RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin B1
chain; Flags: Precursor
gi|7297300|gb|AAF52563.1| LanB1, isoform A [Drosophila melanogaster]
gi|22945905|gb|AAN10647.1| LanB1, isoform B [Drosophila melanogaster]
Length = 1788
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN+HA C F+ ++ SG SGGVC C H T G+HC C +YRDP + IT +
Sbjct: 355 CECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERV 414
Query: 95 CK 96
C+
Sbjct: 415 CQ 416
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 43 KCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
+C N++LY G CL+C + T G HC CK+G++ D
Sbjct: 992 ECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGD 1034
>gi|4388541|gb|AAD19752.1| laminin B1 chain [Drosophila melanogaster]
Length = 1788
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN+HA C F+ ++ SG SGGVC C H T G+HC C +YRDP + IT +
Sbjct: 357 CECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERV 416
Query: 95 CK 96
C+
Sbjct: 417 CQ 418
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 43 KCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
+C N++LY G CL+C + T G HC CK+G++ D
Sbjct: 992 ECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGD 1034
>gi|195339013|ref|XP_002036116.1| GM16587 [Drosophila sechellia]
gi|194129996|gb|EDW52039.1| GM16587 [Drosophila sechellia]
Length = 1781
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN+HA C F+ ++ SG SGGVC C H T G+HC C +YRDP + IT +
Sbjct: 348 CECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERV 407
Query: 95 CK 96
C+
Sbjct: 408 CQ 409
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 43 KCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
+C N++LY G CL+C + T G HC CK+G++ D
Sbjct: 985 ECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGD 1027
>gi|195577385|ref|XP_002078551.1| GD23490 [Drosophila simulans]
gi|194190560|gb|EDX04136.1| GD23490 [Drosophila simulans]
Length = 1788
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN+HA C F+ ++ SG SGGVC C H T G+HC C +YRDP + IT +
Sbjct: 355 CECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERV 414
Query: 95 CK 96
C+
Sbjct: 415 CQ 416
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 43 KCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
+C N++LY G CL+C + T G HC CK+G++ D
Sbjct: 992 ECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGD 1034
>gi|344237018|gb|EGV93121.1| Laminin subunit beta-1 [Cricetulus griseus]
Length = 1617
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK YY+ P R +
Sbjct: 188 CNCNEHSSSCHFDMAVFLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDVRDPNL 247
Query: 95 CK 96
C+
Sbjct: 248 CE 249
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C + G CL C+ +T G +C C GYY DP
Sbjct: 712 QPCQCNGHAEDCD-----------TVTGECLSCQDYTTGHNCERCLAGYYGDP 753
>gi|354494567|ref|XP_003509408.1| PREDICTED: laminin subunit beta-1 [Cricetulus griseus]
Length = 1837
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK YY+ P R +
Sbjct: 386 CNCNEHSSSCHFDMAVFLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDVRDPNL 445
Query: 95 CKK 97
C+
Sbjct: 446 CEP 448
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C + G CL C+ +T G +C C GYY DP
Sbjct: 916 QPCQCNGHAEDCD-----------TVTGECLSCQDYTTGHNCERCLAGYYGDP 957
>gi|301627181|ref|XP_002942755.1| PREDICTED: netrin-4-like, partial [Xenopus (Silurana) tropicalis]
Length = 339
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA C F+M+++ SG +GGVC C+H T G C CK G++RD P + A
Sbjct: 44 CKCNGHADSCHFDMDVWLGSGNRTGGVCDNCQHNTEGSQCQRCKPGFFRDLKMPFSAPDA 103
Query: 95 CK 96
CK
Sbjct: 104 CK 105
>gi|256080964|ref|XP_002576745.1| netrin [Schistosoma mansoni]
gi|360044990|emb|CCD82538.1| putative netrin [Schistosoma mansoni]
Length = 777
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C NH +C F+++ +K SG +GG+CL C+H T G +C C GYYRDP+ + +
Sbjct: 394 KPCQCGNHTNQCIFSVKAFKRSGGITGGICLACQHHTEGSNCDQCIIGYYRDPNLTMGNE 453
Query: 93 KACKK 97
AC++
Sbjct: 454 HACRE 458
>gi|410952084|ref|XP_003982718.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-1 [Felis
catus]
Length = 2188
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK Y++ P R +
Sbjct: 737 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYFQHPERDVRDPHL 796
Query: 95 CKK 97
C++
Sbjct: 797 CER 799
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S+ G C C+ +T G +C C GYY DP
Sbjct: 1267 QPCQCNGHADDCD-----------SATGACSGCQDYTTGHNCERCLAGYYGDP 1308
>gi|348581898|ref|XP_003476714.1| PREDICTED: laminin subunit beta-2 [Cavia porcellus]
Length = 1800
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C C+ H C F+M +Y SG SGGVC +C+H T G HC C+ +YRDP + +
Sbjct: 347 RKCECHGHTHSCHFDMAIYLASGNVSGGVCDRCQHNTVGHHCELCRPFFYRDPMKDLRDP 406
Query: 93 KACK 96
C+
Sbjct: 407 AVCR 410
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G+CL CR T G HC C G+Y DP P
Sbjct: 879 CICNGHADECD-----------THTGICLNCRDHTGGEHCERCIAGFYGDPQLP 921
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C + T G HC YCK G++ +R HR C
Sbjct: 1007 GQCLRCLYHTEGPHCAYCKPGFHGQATRQSCHRCTC 1042
>gi|443732359|gb|ELU17115.1| hypothetical protein CAPTEDRAFT_183991 [Capitella teleta]
Length = 1756
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+NHA +C F+ +Y+ +GR SGGVC C+H T GR+C CK +++DP R +
Sbjct: 325 CECHNHATRCHFDPAVYEQTGRVSGGVCDDCQHNTRGRNCDECKPFFFQDPGRDLRDPSV 384
Query: 95 CK 96
C+
Sbjct: 385 CQ 386
>gi|359321756|ref|XP_533089.4| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-1 isoform 1
[Canis lupus familiaris]
Length = 1794
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G +GGVC C+H T GR+C CK Y++ P R +
Sbjct: 343 CNCNEHSSSCHFDMAVYLATGNVTGGVCDDCQHNTMGRNCEQCKPFYFQHPERDVRDPNL 402
Query: 95 CKK 97
C++
Sbjct: 403 CER 405
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G CL C+ ++ G +C C GYY DP
Sbjct: 873 QPCQCNGHAEDCD-----------PGTGACLSCQDYSTGHNCERCLAGYYGDP 914
>gi|195471415|ref|XP_002088000.1| GE14631 [Drosophila yakuba]
gi|194174101|gb|EDW87712.1| GE14631 [Drosophila yakuba]
Length = 1788
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN+HA C F+ ++ SG SGGVC C H T G+HC C +YRDP++ IT
Sbjct: 355 CECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPAQDITSENV 414
Query: 95 C 95
C
Sbjct: 415 C 415
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 43 KCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
+C N++LY G CL+C + T G HC CK+G++ D
Sbjct: 992 ECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGD 1034
>gi|380805103|gb|AFE74427.1| laminin subunit beta-1 precursor, partial [Macaca mulatta]
Length = 135
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G SGGVC C+H T GR+C CK YY+ P R I
Sbjct: 31 CNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNF 90
Query: 95 CKK 97
C++
Sbjct: 91 CER 93
>gi|301607117|ref|XP_002933140.1| PREDICTED: laminin subunit beta-1-like [Xenopus (Silurana)
tropicalis]
Length = 1782
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G +SGGVC C+H T GR+C CK +Y+ P + I
Sbjct: 334 CNCNEHSTHCHFDMAVYMSTGNTSGGVCDDCQHNTMGRNCEQCKPFFYQHPDKDIRDPNI 393
Query: 95 CK 96
C+
Sbjct: 394 CQ 395
>gi|432859182|ref|XP_004069053.1| PREDICTED: laminin subunit beta-3-like [Oryzias latipes]
Length = 1136
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 35/63 (55%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C CNNHA+ C F+ L++ SGR SGGVC C H T G C C GY +P +
Sbjct: 287 KRCECNNHAQSCHFDWALFESSGRRSGGVCDNCMHHTTGPQCDRCAPGYQPNPRSRMDRP 346
Query: 93 KAC 95
AC
Sbjct: 347 DAC 349
>gi|392341097|ref|XP_003754246.1| PREDICTED: laminin subunit beta-1, partial [Rattus norvegicus]
Length = 1772
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK Y++ P R I
Sbjct: 396 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 455
Query: 95 CKK 97
C+
Sbjct: 456 CEP 458
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C + G CL C+ +T G +C C GYY DP
Sbjct: 926 QPCQCNGHAEDCD-----------TVTGECLSCQDYTTGHNCERCLAGYYGDP 967
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 20 KKFRCSSRDRIFFQTCNCNNHARKCR----FNMELYKLSGRSSGGVCLQCRHFTAGRHCH 75
+K+ + D + C C HA +C FN E+ + G C+ CRH T G +C
Sbjct: 317 EKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVH----GHCM-CRHNTKGLNCE 371
Query: 76 YCKEGYYRDPSRPITHR--KACKK 97
C + Y+ P RP R ACKK
Sbjct: 372 LCMDFYHDLPWRPAEGRNSNACKK 395
>gi|348545290|ref|XP_003460113.1| PREDICTED: laminin subunit beta-1-like [Oreochromis niloticus]
Length = 1818
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+ ++ SG SGGVC C H TAG +C CK YY+ P R I
Sbjct: 367 CNCNQHSDSCHFDAAVFAASGNVSGGVCDDCEHNTAGNNCEQCKPFYYQHPERDIRDANI 426
Query: 95 CKK 97
C+
Sbjct: 427 CQP 429
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C+CN HA C + SGR C+ CR T GR C C +GYY DP+
Sbjct: 896 CSCNGHADVCDPD------SGR-----CIDCRDHTMGRACDRCLDGYYGDPT 936
>gi|410918665|ref|XP_003972805.1| PREDICTED: netrin-4-like [Takifugu rubripes]
Length = 615
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CN HA C F+ ++ SG+ SGGVC C H T GR C CK +YRDP RP
Sbjct: 324 QKCKCNGHALSCHFDWTAWRESGQRSGGVC-DCLHNTEGRQCQKCKVNFYRDPRRPHAAP 382
Query: 93 KACK 96
+CK
Sbjct: 383 DSCK 386
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 11 DKESGGEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSG---GVCLQCRH 67
D + EHL + D I +C+CN HA +C + + R++ G C+ CRH
Sbjct: 233 DLNAAREHLPTQHFAIYDLIVKGSCSCNGHAEQCVPALGYQPIRDRTNHVVHGKCV-CRH 291
Query: 68 FTAGRHCHYCKEGYYRDPSRP 88
TAG HC C Y P +P
Sbjct: 292 NTAGDHCERCAPLYNDRPWQP 312
>gi|114326497|ref|NP_032508.2| laminin subunit beta-1 [Mus musculus]
Length = 1834
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK Y++ P R I
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 95 CKK 97
C+
Sbjct: 443 CEP 445
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C + G CL C+ +T G +C C GYY DP
Sbjct: 913 QPCQCNGHALDCD-----------TVTGECLSCQDYTTGHNCERCLAGYYGDP 954
>gi|392348740|ref|XP_003750185.1| PREDICTED: laminin subunit beta-1 [Rattus norvegicus]
Length = 1834
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK Y++ P R I
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 95 CKK 97
C+
Sbjct: 443 CEP 445
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C + G CL C+ +T G +C C GYY DP
Sbjct: 913 QPCQCNGHAEDCD-----------TVTGECLSCQDYTTGHNCERCLAGYYGDP 954
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
G CL+C + T G HC +C+ GYY D R
Sbjct: 1043 GRCLKCLYHTEGDHCQFCQHGYYGDALR 1070
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 20 KKFRCSSRDRIFFQTCNCNNHARKCR----FNMELYKLSGRSSGGVCLQCRHFTAGRHCH 75
+K+ + D + C C HA +C FN E+ + G C+ CRH T G +C
Sbjct: 304 EKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVH----GHCM-CRHNTKGLNCE 358
Query: 76 YCKEGYYRDPSRPITHR--KACKK 97
C + Y+ P RP R ACKK
Sbjct: 359 LCMDFYHDLPWRPAEGRNSNACKK 382
>gi|293690|gb|AAA39407.1| laminin B1 [Mus musculus]
Length = 1834
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK Y++ P R I
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 95 CKK 97
C+
Sbjct: 443 CEP 445
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C + G CL C+ +T G +C C GYY DP
Sbjct: 913 QPCQCNGHALDCD-----------TVTGECLSCQDYTTGHNCERCLAGYYGDP 954
>gi|74181151|dbj|BAE27840.1| unnamed protein product [Mus musculus]
Length = 1834
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK Y++ P R I
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 95 CKK 97
C+
Sbjct: 443 CEP 445
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C + G CL C+ +T G +C C GYY DP
Sbjct: 913 QPCQCNGHALDCD-----------TVTGECLSCQDYTTGHNCERCLAGYYGDP 954
>gi|341941025|sp|P02469.3|LAMB1_MOUSE RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin B1
chain; AltName: Full=Laminin-1 subunit beta; AltName:
Full=Laminin-10 subunit beta; AltName: Full=Laminin-12
subunit beta; AltName: Full=Laminin-2 subunit beta;
AltName: Full=Laminin-6 subunit beta; AltName:
Full=Laminin-8 subunit beta; Flags: Precursor
Length = 1786
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK Y++ P R I
Sbjct: 335 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 394
Query: 95 CKK 97
C+
Sbjct: 395 CEP 397
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C + G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHALDCD-----------TVTGECLSCQDYTTGHNCERCLAGYYGDP 906
>gi|223462235|gb|AAI50810.1| Laminin B1 subunit 1 [Mus musculus]
Length = 1834
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK Y++ P R I
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 95 CKK 97
C+
Sbjct: 443 CEP 445
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C + G CL C+ +T G +C C GYY DP
Sbjct: 913 QPCQCNGHALDCD-----------TVTGECLSCQDYTTGHNCERCLAGYYGDP 954
>gi|148704971|gb|EDL36918.1| laminin B1 subunit 1 [Mus musculus]
Length = 1849
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK Y++ P R I
Sbjct: 398 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 457
Query: 95 CKK 97
C+
Sbjct: 458 CEP 460
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C + G CL C+ +T G +C C GYY DP
Sbjct: 928 QPCQCNGHALDCD-----------TVTGECLSCQDYTTGHNCERCLAGYYGDP 969
>gi|296209977|ref|XP_002751795.1| PREDICTED: laminin subunit beta-4 [Callithrix jacchus]
Length = 1761
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
+C+CN H+ +C F+ Y SG SGGVC C+H T G+HC C+ +YRDP + I+
Sbjct: 331 SCSCNGHSSRCHFDRTAYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKAISDPY 390
Query: 94 AC 95
AC
Sbjct: 391 AC 392
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C CN A C G C CR FT GR+C C +GYY +PS
Sbjct: 863 CPCNGFAELCD-----------PQTGSCFNCRGFTTGRNCERCIDGYYGNPS 903
>gi|194862946|ref|XP_001970200.1| GG10498 [Drosophila erecta]
gi|190662067|gb|EDV59259.1| GG10498 [Drosophila erecta]
Length = 1786
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN+HA C F+ ++ SG SGGVC C H T G+HC C +YRDP + IT
Sbjct: 355 CECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSDSV 414
Query: 95 CK 96
C+
Sbjct: 415 CQ 416
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 43 KCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
+C N++LY G CL+C + T G HC CK+G++ D
Sbjct: 992 ECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGD 1034
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C G C+ C+ T G C C +GYY +P
Sbjct: 881 QVCQCNGHAATCD-----------PIQGTCIDCQDSTTGYSCESCLDGYYGNP 922
>gi|268551895|ref|XP_002633929.1| C. briggsae CBR-LAM-1 protein [Caenorhabditis briggsae]
Length = 1265
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA C F+ +Y+ SG SGGVC C H T G++C CK +YRDP R I
Sbjct: 398 CNCNRHALGCHFDRAVYEASGFVSGGVCDDCMHNTQGKNCEQCKPFFYRDPRRTIDDPHV 457
Query: 95 C 95
C
Sbjct: 458 C 458
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
TC CN+HA C S G C++CR T G +C C++GYY DP
Sbjct: 927 TCQCNDHANICD-----------QSTGACIECRDLTTGHYCDRCQDGYYGDP 967
>gi|301607123|ref|XP_002933162.1| PREDICTED: laminin subunit beta-4-like [Xenopus (Silurana)
tropicalis]
Length = 1537
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ KC F+M +Y + R+SGGVC C+ T G C CK +YR+P + A
Sbjct: 326 CNCNGHSEKCHFDMAVYLANNRASGGVCEDCQDNTMGNQCELCKPYFYRNPVHDVADPYA 385
Query: 95 C 95
C
Sbjct: 386 C 386
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN ++ C G CL C+ FT G +C C+ YY +P
Sbjct: 855 QPCQCNGNSEICDL-----------VTGACLDCKGFTNGTNCERCQNNYYGNP 896
>gi|195034153|ref|XP_001988835.1| GH10359 [Drosophila grimshawi]
gi|193904835|gb|EDW03702.1| GH10359 [Drosophila grimshawi]
Length = 1788
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CNNHA C F+ ++ SG SGGVC C H T G+HC C +YRDP ++
Sbjct: 352 CECNNHAVSCHFDEAVFAASGFVSGGVCDNCLHNTQGQHCEECMAFFYRDPLEQLSSPNV 411
Query: 95 CK 96
CK
Sbjct: 412 CK 413
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN HA C L+G+ CL C T G C YC +GYY DP
Sbjct: 882 VCECNGHAALCD------PLTGQ-----CLNCLDSTTGFRCDYCLDGYYGDP 922
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 43 KCRFNMELYKLSGRSSG--GVCLQCRHFTAGRHCHYCKEGYYRD 84
+C N++ Y +G G G CL+C + T G HC C++GY+ D
Sbjct: 992 ECSNNIDTYD-TGNCDGQTGACLKCLYDTTGDHCELCRDGYHGD 1034
>gi|195118467|ref|XP_002003758.1| GI21346 [Drosophila mojavensis]
gi|193914333|gb|EDW13200.1| GI21346 [Drosophila mojavensis]
Length = 1793
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA C F+ ++ SG SGG C C H T G+HC C +YRDP+ P++
Sbjct: 354 CECNGHAVSCHFDEAMFVASGHVSGGFCDNCLHNTQGQHCEECMAFFYRDPAEPLSSPNV 413
Query: 95 CK 96
C+
Sbjct: 414 CR 415
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN HA C L+G+ C+ C+ T G +C C +GYY DP
Sbjct: 887 VCECNGHASVCD------PLTGQ-----CINCQDSTDGFNCDTCLDGYYGDP 927
>gi|410918673|ref|XP_003972809.1| PREDICTED: laminin subunit beta-1-like [Takifugu rubripes]
Length = 1773
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H +C F+M +Y +G SGGVC C+H T GR C C YY+ P+R +
Sbjct: 333 CECNQHTTECHFDMAVYMTTGNVSGGVCDDCKHNTVGRQCEQCAPFYYQHPNRDLRDPNV 392
Query: 95 CKK 97
C+
Sbjct: 393 CEP 395
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C+CN H+ C G C CR FT G HC C +GY+ DP
Sbjct: 854 CHCNGHSDYCH-----------PQTGQCQSCRDFTTGHHCERCLDGYHGDP 893
>gi|357607280|gb|EHJ65435.1| hypothetical protein KGM_05418 [Danaus plexippus]
Length = 1648
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CNNHA C F+ +Y +G+ SGGVC C+H T G +C C YY+DP I
Sbjct: 208 CTCNNHATTCHFDAAVYNKTGKISGGVCDNCQHNTMGVNCERCMPTYYKDPRLDIQSPDV 267
Query: 95 CK 96
C+
Sbjct: 268 CQ 269
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYY 82
G CL+C H TAG HC C+EGYY
Sbjct: 871 GKCLKCLHNTAGEHCEVCEEGYY 893
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C+CN HA +C G C +C+ T G C C EGYY DP
Sbjct: 741 QQCDCNGHAVECD-----------DKTGACKECQENTEGHRCERCIEGYYGDP 782
>gi|149051074|gb|EDM03247.1| laminin, beta 1 (predicted) [Rattus norvegicus]
Length = 1010
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK Y++ P R I
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 95 CKK 97
C+
Sbjct: 443 CEP 445
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C + G CL C+ +T G +C C GYY DP
Sbjct: 913 QPCQCNGHAEDCD-----------TVTGECLSCQDYTTGHNCERCLAGYYGDP 954
>gi|351712767|gb|EHB15686.1| Laminin subunit beta-1, partial [Heterocephalus glaber]
Length = 1790
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN H+ C F+M +Y +G +GGVC C+H T GR C CK YY+ P R I
Sbjct: 339 CSCNEHSSACHFDMAVYLATGNVTGGVCDGCQHNTMGRSCEQCKPFYYQHPERDIRAPNI 398
Query: 95 CKK 97
C++
Sbjct: 399 CER 401
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C ++ G CL+C+ +T G +C C GYY DP
Sbjct: 869 QPCQCNGHAEDCD-----------TATGACLRCQDYTMGHNCERCLAGYYGDP 910
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 20 KKFRCSSRDRIFFQTCNCNNHARKCR----FNMELYKLSGRSSGGVCLQCRHFTAGRHCH 75
+K+ + D + C C HA +C FN E+ + G C+ CRH T G +C
Sbjct: 260 EKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVH----GHCM-CRHNTKGLNCE 314
Query: 76 YCKEGYYRDPSRPITHR--KACKK 97
C + Y+ P RP R ACKK
Sbjct: 315 LCMDFYHDLPWRPAEGRNSNACKK 338
>gi|111305466|gb|AAI21791.1| Lamb1-1 protein [Mus musculus]
Length = 563
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK Y++ P R I
Sbjct: 383 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 442
Query: 95 CKK 97
C+
Sbjct: 443 CEP 445
>gi|400977322|pdb|4AQS|A Chain A, Laminin Beta1 Ln-Le1-4 Structure
Length = 525
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ +G SGGVC C+H T GR+C CK Y++ P R I
Sbjct: 318 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNL 377
Query: 95 CKK 97
C+
Sbjct: 378 CEP 380
>gi|198476758|ref|XP_002132437.1| GA25460 [Drosophila pseudoobscura pseudoobscura]
gi|198137839|gb|EDY69839.1| GA25460 [Drosophila pseudoobscura pseudoobscura]
Length = 1794
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN+HA C F+ L+ SG SGG+C C H T G+HC C +YRDP++ I
Sbjct: 360 CECNDHAVSCHFDEALFTASGHVSGGMCDNCMHNTQGQHCEECMPYFYRDPTQDIRSEHV 419
Query: 95 CK 96
C+
Sbjct: 420 CQ 421
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN HA +C G CL C+ FT G C C +GYY +P
Sbjct: 890 VCQCNGHAAQCD-----------PLKGTCLNCQDFTTGYSCDSCLDGYYGNP 930
>gi|327266061|ref|XP_003217825.1| PREDICTED: netrin-4-like [Anolis carolinensis]
Length = 748
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+NHA C F+ ++ S + SGG+C C+H T G C CK G+YRD +PI+ +
Sbjct: 445 CRCHNHADSCHFDRSVWLASRKKSGGICDNCKHNTEGNRCQRCKPGFYRDRGKPISSPQI 504
Query: 95 CKK 97
CK
Sbjct: 505 CKP 507
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 28 DRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
D I +C CN HA +C+ + G C+ CRH TAG HC C Y P
Sbjct: 373 DLIVRGSCFCNGHAEECQL-ANGTGVVDNVVHGRCV-CRHNTAGHHCERCAPLYNDQPWE 430
Query: 88 P 88
P
Sbjct: 431 P 431
>gi|379699026|ref|NP_001243987.1| laminin beta-2 chain [Bombyx mori]
gi|346714240|dbj|BAK79119.1| laminin beta-2 chain [Bombyx mori]
Length = 1765
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CNNHA C F+ +YK G+ SGGVC C+H T G +C C+ +Y+DPS I
Sbjct: 324 CTCNNHATTCHFDPAVYK-XGKISGGVCDNCQHNTIGVNCERCRPKFYKDPSLDIQSPDI 382
Query: 95 CK 96
CK
Sbjct: 383 CK 384
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C+CN HA +C G C +C +T G C C EGYY DP
Sbjct: 857 QQCDCNGHAFECD-----------DKTGACKECTDYTEGNRCERCVEGYYGDP 898
>gi|391347857|ref|XP_003748170.1| PREDICTED: laminin subunit beta-2-like [Metaseiulus occidentalis]
Length = 2445
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%)
Query: 21 KFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEG 80
K++ +S+D + C+CNN + +C F+ E+Y +G+ SGG C+ CR TAG +C C++
Sbjct: 1024 KWQRASKDFSTCKKCDCNNFSDECVFDEEIYLKNGKKSGGRCINCRDHTAGNNCELCEDF 1083
Query: 81 YYRDP 85
YYR+P
Sbjct: 1084 YYRNP 1088
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 57 SSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPI 89
S C+ CR TAG C C EG+Y DP R I
Sbjct: 1556 SQNATCIDCRDNTAGDTCEKCLEGFYGDPLRGI 1588
>gi|47220594|emb|CAG05620.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1873
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 34/62 (54%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y SG SGGVC C H T G C C+ Y++ P R I
Sbjct: 310 CNCNQHSDSCHFDMAVYLASGNVSGGVCDSCLHNTVGNQCEQCRPFYFQHPERDIRDPNI 369
Query: 95 CK 96
C+
Sbjct: 370 CE 371
>gi|47218346|emb|CAG04178.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1960
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 31 FFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT 90
F C CN HA C F+M +Y +G SGGVC C+H T GR C C Y++ P+R
Sbjct: 368 FPSECECNQHATTCHFDMAVYMTTGNVSGGVCDDCKHNTMGRQCELCAPFYFQHPNRDPR 427
Query: 91 HRKACKK 97
C+
Sbjct: 428 DPNVCEP 434
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 8/49 (16%)
Query: 35 CNCNNHARKCRFNMELYKL-SGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C CNN N++++ S + G CL+C H T G C +CK GYY
Sbjct: 1084 CQCNN-------NIDMHDPGSCDAQTGACLRCLHHTEGYACQHCKAGYY 1125
>gi|390348792|ref|XP_787259.3| PREDICTED: laminin subunit beta-1 [Strongylocentrotus purpuratus]
Length = 1668
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN+HA C F+ +Y+L+ +SGGVC C H T GR+C CK ++ P R I
Sbjct: 333 CNCNDHATSCHFDEAVYRLTNGASGGVCDNCLHNTVGRNCEQCKPFFFMHPDRDIRDPNI 392
Query: 95 C 95
C
Sbjct: 393 C 393
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
Q CNCN HA C G C+ C+ TAG C CK GYY DP+R
Sbjct: 857 QRCNCNGHADICD-----------PRTGECIDCQSNTAGFECESCKRGYYGDPTR 900
>gi|355698918|gb|AES00958.1| laminin, beta 1 [Mustela putorius furo]
Length = 477
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M +Y +G +GGVC C+H T GR C CK Y++ P R +
Sbjct: 90 CNCNGHSGSCHFDMAVYLATGNVTGGVCDDCQHNTMGRSCEQCKPFYFQHPERDVRDPNL 149
Query: 95 CKK 97
C++
Sbjct: 150 CER 152
>gi|444705772|gb|ELW47163.1| Netrin-5 [Tupaia chinensis]
Length = 287
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 65 CRHFTAGRHCHYCKEGYYRDPSRPITHRKACKK 97
CRH TAGRHCHYC+ G++RDPS+PIT RKAC+
Sbjct: 116 CRHHTAGRHCHYCQPGFWRDPSQPITSRKACRA 148
>gi|281349144|gb|EFB24728.1| hypothetical protein PANDA_001514 [Ailuropoda melanoleuca]
Length = 1791
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN H+ C F+M +Y +G +GGVC C+H T GR+C CK Y++ P R +
Sbjct: 340 CHCNEHSSSCHFDMAVYLATGNVTGGVCDDCQHNTMGRNCEQCKPFYFQHPERDVRDPNL 399
Query: 95 CKK 97
C++
Sbjct: 400 CER 402
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G CL C+ +T G +C C GYY DP
Sbjct: 870 QPCQCNGHAEDCD-----------SGTGACLGCQDYTTGHNCERCLAGYYGDP 911
>gi|301755687|ref|XP_002913688.1| PREDICTED: laminin subunit beta-1-like [Ailuropoda melanoleuca]
Length = 1786
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN H+ C F+M +Y +G +GGVC C+H T GR+C CK Y++ P R +
Sbjct: 335 CHCNEHSSSCHFDMAVYLATGNVTGGVCDDCQHNTMGRNCEQCKPFYFQHPERDVRDPNL 394
Query: 95 CKK 97
C++
Sbjct: 395 CER 397
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA C S G CL C+ +T G +C C GYY DP
Sbjct: 865 QPCQCNGHAEDCD-----------SGTGACLGCQDYTTGHNCERCLAGYYGDP 906
>gi|359070697|ref|XP_002691654.2| PREDICTED: laminin subunit gamma-3 [Bos taurus]
Length = 1470
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ EL++ SG GG CL CR TAG HC C+E +YR P P
Sbjct: 328 CNCSGHSEECTFDRELFRSSGH--GGRCLHCRAHTAGPHCERCQENFYRWSPQTP 380
>gi|156400070|ref|XP_001638823.1| predicted protein [Nematostella vectensis]
gi|156225947|gb|EDO46760.1| predicted protein [Nematostella vectensis]
Length = 3129
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSS---GGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
C CNNHA C +N L + GGVC+ C H TAG+ CH C++ ++R+P + ++
Sbjct: 562 CECNNHATACYYNSSLDPSPASRTVGGGGVCINCLHNTAGQFCHVCRDDFFREPGKSLSA 621
Query: 92 RKAC 95
C
Sbjct: 622 VDVC 625
>gi|156371018|ref|XP_001628563.1| predicted protein [Nematostella vectensis]
gi|156215543|gb|EDO36500.1| predicted protein [Nematostella vectensis]
Length = 1806
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q CNCNNHA C +N L G+C C+H T G HC C +YRD S+PI H
Sbjct: 341 QECNCNNHATSCVYNETL-------GYGLCKGCQHNTQGDHCQNCTAKHYRDLSKPINHV 393
Query: 93 KAC 95
AC
Sbjct: 394 NAC 396
>gi|296482091|tpg|DAA24206.1| TPA: laminin, gamma 3-like [Bos taurus]
Length = 1589
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ EL++ SG GG CL CR TAG HC C+E +YR P P
Sbjct: 414 CNCSGHSEECTFDRELFRSSGH--GGRCLHCRAHTAGPHCERCQENFYRWSPQTP 466
>gi|94732132|emb|CAK04427.1| novel protein similar to laminin beta 1 (lamb1) [Danio rerio]
Length = 1732
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H+ C F+M +Y SG SGGVC C H T G+ C CK YY+ P R I +
Sbjct: 314 CECNRHSDSCHFDMAVYLSSGNRSGGVCDDCEHNTQGQWCENCKPFYYKHPQRDIRDPRI 373
Query: 95 CK 96
C+
Sbjct: 374 CE 375
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 17 EHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHY 76
E KK+ + D + C C HA KC + G G C+ C H T G +C
Sbjct: 233 EARKKYFYAVYDMVIRGNCFCYGHASKCAPIGNEAGVEGMVHGH-CM-CNHHTTGLNCEE 290
Query: 77 CKEGYYRDPSRPITHRK--ACKK 97
C++ Y P RP R+ ACKK
Sbjct: 291 CEDFYQDQPWRPAVGRETNACKK 313
>gi|410908687|ref|XP_003967822.1| PREDICTED: laminin subunit beta-1-like [Takifugu rubripes]
Length = 1812
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ +C F+M + S SGGVC C H TAG +C C+ YY+ P R I
Sbjct: 362 CNCNQHSDRCHFDMAAFVASANVSGGVCDNCLHNTAGSNCEQCQPFYYQHPERDIRDPNI 421
Query: 95 CK 96
C+
Sbjct: 422 CE 423
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN H +C ++ G CL CR + G C C EGYY DP
Sbjct: 889 CFCNGHTDECE-----------AATGRCLHCRDHSTGHTCDRCLEGYYGDP 928
>gi|125814641|ref|XP_684538.2| PREDICTED: laminin subunit beta-1 [Danio rerio]
Length = 1767
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H+ C F+M +Y SG SGGVC C H T G+ C CK YY+ P R I +
Sbjct: 330 CECNRHSDSCHFDMAVYLSSGNRSGGVCDDCEHNTQGQWCENCKPFYYKHPQRDIRDPRI 389
Query: 95 CK 96
C+
Sbjct: 390 CE 391
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 17 EHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHY 76
E KK+ + D + C C HA KC + G G C+ C H T G +C
Sbjct: 249 EARKKYFYAVYDMVIRGNCFCYGHASKCAPIGNEAGVEGMVHGH-CM-CNHHTTGLNCEE 306
Query: 77 CKEGYYRDPSRPITHRK--ACKK 97
C++ Y P RP R+ ACKK
Sbjct: 307 CEDFYQDQPWRPAVGRETNACKK 329
>gi|195434336|ref|XP_002065159.1| GK14820 [Drosophila willistoni]
gi|194161244|gb|EDW76145.1| GK14820 [Drosophila willistoni]
Length = 1800
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 34/62 (54%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN+HA C F+ ++ SG SGGVC C H T G+HC C +YRDP +
Sbjct: 359 CECNDHAVSCHFDEAVFTASGHVSGGVCDNCMHNTQGQHCEECMPFFYRDPVEDLRSPYV 418
Query: 95 CK 96
CK
Sbjct: 419 CK 420
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C CN HA +C G C+QC+ TAG C C +GYY DP
Sbjct: 893 QVCECNGHAAQCD-----------PVTGQCIQCQDSTAGYACDTCLDGYYGDP 934
>gi|326427879|gb|EGD73449.1| laminin alpha 5 chain [Salpingoeca sp. ATCC 50818]
Length = 2095
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
C+CN HA C +N L R GGVC C H TAG HC C GYY +P+ P H
Sbjct: 348 CDCNEHALSCHYNASLDAFPNDRTRGDGGVCDSCMHNTAGIHCETCAPGYYENPAVPRNH 407
Query: 92 RKAC 95
AC
Sbjct: 408 VNAC 411
>gi|432860251|ref|XP_004069466.1| PREDICTED: laminin subunit beta-1-like [Oryzias latipes]
Length = 1785
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN H+ C F+M ++ SG SGGVC C+H TAG C CK +Y+ P R
Sbjct: 340 CNCNQHSDACHFDMAVFVASGGVSGGVCDNCQHNTAGHKCEQCKPFFYQHPERDARDPNI 399
Query: 95 CKK 97
C+
Sbjct: 400 CQP 402
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C+CN HA C + G CL CR TAG C C +GYY DP
Sbjct: 866 CSCNGHAETCDPDT-----------GSCLHCRDHTAGHSCERCLDGYYGDP 905
>gi|432094058|gb|ELK25850.1| Laminin subunit alpha-5 [Myotis davidii]
Length = 3259
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + + GGVC+ C+H T G +C C G+YRDP
Sbjct: 286 QSCNCHGHADDCYYDPEVDRHNASQNQDSVYQGGGVCIACQHHTTGINCERCLPGFYRDP 345
Query: 86 SRPITHRKACKK 97
+P+ C++
Sbjct: 346 DQPLDSPHTCRR 357
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 15/58 (25%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR----DPSRP 88
C C+ H+ C + G C+ C+H T G HC C+ G+ R DP+ P
Sbjct: 1571 CQCHGHSDLCIPGV-----------GTCMDCQHNTEGDHCERCQAGFVRIGTEDPAAP 1617
>gi|195385926|ref|XP_002051655.1| GJ11135 [Drosophila virilis]
gi|194148112|gb|EDW63810.1| GJ11135 [Drosophila virilis]
Length = 1796
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA C F+ ++ SG SGG C C H T G+HC C +YRDP+ ++
Sbjct: 354 CECNGHAVSCHFDEAVFVASGHVSGGFCDNCLHNTQGQHCEECMAFFYRDPAEQLSSPNV 413
Query: 95 CK 96
CK
Sbjct: 414 CK 415
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+C CN HA C L+G+ CL C+ T G C C +GYY DP
Sbjct: 890 SCECNGHAALCD------PLTGQ-----CLNCQDSTTGFGCDSCLDGYYGDP 930
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 43 KCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
+C N+++Y G CL+C + T G HC C++GY+ D
Sbjct: 1000 ECSNNIDIYDTGNCDRQTGACLKCLYDTTGDHCELCRDGYHGD 1042
>gi|1335202|emb|CAA56130.1| beta2/S laminin chain [Homo sapiens]
Length = 1798
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C+ + H C F+M +Y SG SGGVC C+H TA RHC C+ +YRDP++ +
Sbjct: 345 RKCDRHGHTHSCHFDMAVYLGSGNVSGGVCDGCQHNTAWRHCELCRPFFYRDPTKDLRDP 404
Query: 93 KACK 96
C+
Sbjct: 405 AVCR 408
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
C CN HA +C + G CL CR T G HC C G++ DP P
Sbjct: 877 CVCNGHADECN-----------THTGACLGCRDLTGGEHCERCIAGFHGDPRLP 919
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C H T G HC + K G++ +R HR C
Sbjct: 1005 GQCLRCLHHTEGPHCAHSKPGFHGQAARQSCHRCTC 1040
>gi|403282675|ref|XP_003932767.1| PREDICTED: laminin subunit alpha-5, partial [Saimiri boliviensis
boliviensis]
Length = 3596
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 272 QSCNCHGHATDCYYDPEVDRRRASQSMDGTYQGGGVCIDCQHHTTGINCERCLPGFYRSP 331
Query: 86 SRPITHRKACKK 97
P+ AC++
Sbjct: 332 DHPLDSPHACRR 343
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY---RDPSRP 88
C C+ H+ +C L G G+C+ C+H T G C C+ G+ DPS P
Sbjct: 1775 CQCHGHSDRC--------LPG---SGICVGCQHNTEGPRCERCQAGFMSSGEDPSAP 1820
>gi|348521268|ref|XP_003448148.1| PREDICTED: laminin subunit beta-1-like [Oreochromis niloticus]
Length = 1779
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN H+ C F++ +Y SG SGGVC C+H T GR C C +Y+ PSR +
Sbjct: 333 CECNQHSTSCHFDLAVYVASGNVSGGVCDDCQHNTLGRLCEQCAPFFYQHPSRNLRDPNI 392
Query: 95 CKK 97
C+
Sbjct: 393 CEP 395
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN H+ C G C CR FT G HC C GY+ DP
Sbjct: 859 CQCNGHSEYCH-----------PQTGECQGCRDFTTGHHCERCLSGYHGDP 898
>gi|301619895|ref|XP_002939321.1| PREDICTED: Usherin-like [Xenopus (Silurana) tropicalis]
Length = 5022
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGR 72
G+ + + C + C CNNHA KC +N L + GGVC C H T G+
Sbjct: 482 GDQVNAYNC--------RLCQCNNHATKCHYNATLDPYPHDHDQGGGGVCEDCSHNTTGQ 533
Query: 73 HCHYCKEGYYR----DPS 86
HC CKE +YR DP+
Sbjct: 534 HCQLCKEHFYRGAGDDPA 551
>gi|432944102|ref|XP_004083323.1| PREDICTED: laminin subunit beta-1-like [Oryzias latipes]
Length = 1778
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CN+HA C F++ ++ ++G SGGVC C+H T GR C C +Y+ P+R +
Sbjct: 333 CDCNHHATSCHFDLAVFMMTGNVSGGVCDNCQHNTMGRQCEQCARFFYQHPNRHLRDPNI 392
Query: 95 CKK 97
C+
Sbjct: 393 CEP 395
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN H+ C N G C CR FT G HC C GY+ +P
Sbjct: 859 CQCNGHSDYCHPNT-----------GECQGCRDFTTGHHCERCMNGYHGNP 898
>gi|74006161|ref|XP_545710.2| PREDICTED: usherin [Canis lupus familiaris]
Length = 5199
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGR 72
G+ + F C + C CNNH+R C +N+ + R GGVC C H T GR
Sbjct: 561 GDQVNAFNC--------KPCQCNNHSRSCHYNISVDPFPFEHHRGGGGVCEDCEHNTTGR 612
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 613 NCELCKDYFFRPVGADPS 630
>gi|345329548|ref|XP_003431393.1| PREDICTED: usherin [Ornithorhynchus anatinus]
Length = 5043
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGR 72
G+ ++ F C + C C NH+R+C +N+ + R GGVC C+H T GR
Sbjct: 564 GDQVRAFNC--------KPCQCYNHSRRCHYNITMDPFPEEHNRGGGGVCENCQHNTTGR 615
Query: 73 HCHYCKEGYYRDPSRPITHRKACK 96
+C CK+ +R + R CK
Sbjct: 616 NCELCKDYLFRPVGANPSARDVCK 639
>gi|20147503|gb|AAM12527.1|AF443072_1 laminin alpha5 chain precursor [Homo sapiens]
Length = 3695
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H TAG +C C G+YR P
Sbjct: 357 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTAGVNCERCLPGFYRSP 416
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 417 NHPLDSPHVCRR 428
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR---DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1864 CQCHGHSDRC--------LPG---SGVCVDCQHNTEGAHCERCQAGFMSSRDDPSAP 1909
>gi|119595778|gb|EAW75372.1| laminin, alpha 5, isoform CRA_a [Homo sapiens]
Length = 3695
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H TAG +C C G+YR P
Sbjct: 357 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTAGVNCERCLPGFYRSP 416
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 417 NHPLDSPHVCRR 428
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR---DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1864 CQCHGHSDRC--------LPG---SGVCVDCQHNTEGAHCERCQAGFVSSRDDPSTP 1909
>gi|119595780|gb|EAW75374.1| laminin, alpha 5, isoform CRA_c [Homo sapiens]
Length = 3690
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H TAG +C C G+YR P
Sbjct: 357 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTAGVNCERCLPGFYRSP 416
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 417 NHPLDSPHVCRR 428
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR---DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1864 CQCHGHSDRC--------LPG---SGVCVDCQHNTEGAHCERCQAGFVSSRDDPSTP 1909
>gi|194224618|ref|XP_001915033.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Equus
caballus]
Length = 3585
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC++HA C ++ E+ + + + GGVC+ C+H T G +C C G+YR P
Sbjct: 291 QSCNCHSHAHDCYYDPEVDRRNASQNQDNVYQGGGVCIDCQHHTTGINCERCLPGFYRAP 350
Query: 86 SRPITHRKACKK 97
+P+ AC++
Sbjct: 351 DQPLDSPYACRR 362
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 15/58 (25%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR----DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ R DP+ P
Sbjct: 1806 CQCHGHSDRC--------LPG---SGVCVGCQHNTEGDHCEQCQAGFVRSGSEDPAAP 1852
>gi|119595779|gb|EAW75373.1| laminin, alpha 5, isoform CRA_b [Homo sapiens]
Length = 3714
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H TAG +C C G+YR P
Sbjct: 361 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTAGVNCERCLPGFYRSP 420
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 421 NHPLDSPHVCRR 432
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR---DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1865 CQCHGHSDRC--------LPG---SGVCVDCQHNTEGAHCERCQAGFVSSRDDPSTP 1910
>gi|440907459|gb|ELR57607.1| Laminin subunit alpha-5 [Bos grunniens mutus]
Length = 3854
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + + + GGVC+ C+H T G +C C G+YR P
Sbjct: 590 QSCNCYGHAHDCYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSP 649
Query: 86 SRPITHRKACKK 97
P+ AC++
Sbjct: 650 DHPLDSPHACRR 661
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 15/58 (25%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR----DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ R DP+ P
Sbjct: 2068 CQCHGHSDRC--------LPG---SGVCVGCQHNTEGDHCERCQAGFVRTGSEDPAAP 2114
>gi|270014771|gb|EFA11219.1| hypothetical protein TcasGA2_TC005184 [Tribolium castaneum]
Length = 1755
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 44 CRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACK 96
C F+ LY+ +GR SGGVC C+H T G +C CK YYRDP R I + C+
Sbjct: 339 CHFDAALYEATGRISGGVCDGCQHNTMGPNCEQCKPFYYRDPQRDIQDPEVCR 391
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C+CN HA C S G C+ C+ T G +C C +G+Y DP
Sbjct: 853 QRCDCNGHADICD-----------SKTGACINCKDNTEGHNCEQCVDGFYGDP 894
>gi|395829511|ref|XP_003787900.1| PREDICTED: laminin subunit alpha-5 [Otolemur garnettii]
Length = 3693
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 360 QSCNCHGHANDCYYDSEVDRRHASQSQDGTYQGGGVCIDCQHHTTGINCELCLPGFYRTP 419
Query: 86 SRPITHRKACKK 97
+P+ C++
Sbjct: 420 DQPLDSPHICRR 431
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 15/58 (25%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY----RDPSRP 88
C C+ H+ C L G G+C+ C+H T G HC C+ G+ DP+ P
Sbjct: 1864 CQCHGHSDSC--------LPG---SGICVGCQHNTEGDHCERCQAGFVSSRPEDPTAP 1910
>gi|126307081|ref|XP_001375119.1| PREDICTED: usherin [Monodelphis domestica]
Length = 5205
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CNNH+R C ++ + R GGVC C+H T GR
Sbjct: 564 GDQVHAFNC--------KPCQCNNHSRSCHYDKTMDPFPAEYYRGGGGVCDNCQHNTTGR 615
Query: 73 HCHYCKEGYYRDPSRPITHRKACK 96
+C CK+ +R + R CK
Sbjct: 616 NCELCKDYLFRQVGADPSARDICK 639
>gi|345789797|ref|XP_855195.2| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Canis
lupus familiaris]
Length = 2113
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + + GGVC+ C+H T G +C C G+YR P
Sbjct: 513 QSCNCHGHAHDCFYDPEVDRRNASQNQDNVYQGGGVCIDCQHHTTGINCERCLPGFYRAP 572
Query: 86 SRPITHRKACKK 97
P+ AC++
Sbjct: 573 DHPLDSPHACRR 584
>gi|297481810|ref|XP_002707771.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Bos
taurus]
gi|296480898|tpg|DAA23013.1| TPA: laminin alpha 5-like [Bos taurus]
Length = 3689
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + + + GGVC+ C+H T G +C C G+YR P
Sbjct: 351 QSCNCYGHAHDCYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSP 410
Query: 86 SRPITHRKACKK 97
P+ AC++
Sbjct: 411 DHPLDSPHACRR 422
Score = 39.3 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 15/58 (25%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR----DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ R DP+ P
Sbjct: 1852 CQCHGHSDRC--------LPG---SGVCIGCQHNTEGDHCERCQAGFVRTGSEDPAAP 1898
>gi|47220593|emb|CAG05619.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1233
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNC+ H+ C F++ ++ +G SGG+C CRH G C +C+ +Y+DP R H +A
Sbjct: 309 CNCHGHSESCHFDLARFEATGGVSGGMCDNCRHGRTGPQCEHCQAKFYQDPQRARDHPQA 368
Query: 95 CKK 97
C +
Sbjct: 369 CIR 371
>gi|354465114|ref|XP_003495025.1| PREDICTED: LOW QUALITY PROTEIN: usherin-like [Cricetulus griseus]
Length = 5192
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGR 72
G+ + F C + C CNNHAR C ++ + R GGVC C+H T GR
Sbjct: 560 GDGVHPFNC--------KPCQCNNHARSCHYDASVDPFPLEHSRGGGGVCDNCQHHTTGR 611
Query: 73 HCHYCKEGYYR----DPS 86
+C C++ +YR DPS
Sbjct: 612 NCESCQDYFYRPIGADPS 629
>gi|426228370|ref|XP_004008284.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-4 [Ovis aries]
Length = 1635
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRK 93
C+CN H+ CRF+M G SGGVC C+H T G+HC C+ +YRDP +
Sbjct: 334 ACHCNGHSDCCRFDMTAXLARGGRSGGVCGDCQHNTQGQHCDRCRRLFYRDPREATSDPD 393
Query: 94 AC 95
AC
Sbjct: 394 AC 395
>gi|402882065|ref|XP_003904574.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Papio
anubis]
Length = 3694
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 357 QSCNCHGHATDCYYDPEVDQRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP 416
Query: 86 SRPITHRKACKK 97
P+ C++
Sbjct: 417 DHPLDSPHVCRR 428
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY---RDPSRP 88
C C+ H+ +C L G G+C+ C+H T G C C+ G+ DPS P
Sbjct: 1864 CQCHGHSDRC--------LPG---SGICVDCQHNTEGAQCERCQAGFVSSREDPSAP 1909
>gi|119905641|ref|XP_583244.3| PREDICTED: laminin subunit alpha-5 [Bos taurus]
Length = 3427
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + + + GGVC+ C+H T G +C C G+YR P
Sbjct: 351 QSCNCYGHAHDCYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSP 410
Query: 86 SRPITHRKACKK 97
P+ AC++
Sbjct: 411 DHPLDSPHACRR 422
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 15/58 (25%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR----DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ R DP+ P
Sbjct: 1590 CQCHGHSDRC--------LPG---SGVCIGCQHNTEGDHCERCQAGFVRTGSEDPAAP 1636
>gi|354481945|ref|XP_003503161.1| PREDICTED: laminin subunit alpha-5 isoform 2 [Cricetulus griseus]
Length = 3742
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + + GGVCL C+H T G +C C G+YR P
Sbjct: 364 QSCNCHGHAHDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFYRAP 423
Query: 86 SRPITHRKACKK 97
+P+ C++
Sbjct: 424 DQPLDSPYVCRR 435
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 12/62 (19%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRPITHRK 93
C C+ H+ +C L G G C+ C+H T G C C+ G+ R DP+ P
Sbjct: 1865 CQCHGHSDRC--------LPG---SGTCVSCQHNTEGDQCERCRVGFVRTDPNDPAAPCV 1913
Query: 94 AC 95
+C
Sbjct: 1914 SC 1915
>gi|354481943|ref|XP_003503160.1| PREDICTED: laminin subunit alpha-5 isoform 1 [Cricetulus griseus]
gi|344254948|gb|EGW11052.1| Laminin subunit alpha-5 [Cricetulus griseus]
Length = 3735
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + + GGVCL C+H T G +C C G+YR P
Sbjct: 364 QSCNCHGHAHDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFYRAP 423
Query: 86 SRPITHRKACKK 97
+P+ C++
Sbjct: 424 DQPLDSPYVCRR 435
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 12/62 (19%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRPITHRK 93
C C+ H+ +C L G G C+ C+H T G C C+ G+ R DP+ P
Sbjct: 1865 CQCHGHSDRC--------LPG---SGTCVSCQHNTEGDQCERCRVGFVRTDPNDPAAPCV 1913
Query: 94 AC 95
+C
Sbjct: 1914 SC 1915
>gi|260828973|ref|XP_002609437.1| hypothetical protein BRAFLDRAFT_226629 [Branchiostoma floridae]
gi|229294793|gb|EEN65447.1| hypothetical protein BRAFLDRAFT_226629 [Branchiostoma floridae]
Length = 1572
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++ D Q CNCNN A C F+ +LY+ +G GG C+ CR TAG +C C E YY
Sbjct: 298 RATASDSHECQACNCNNLADSCEFDSDLYRRTGH--GGRCIGCRQNTAGPNCERCLEYYY 355
Query: 83 R----DPSRP 88
R DP +P
Sbjct: 356 RAQQSDPCQP 365
>gi|426241863|ref|XP_004014800.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Ovis
aries]
Length = 3434
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + + + GGVC+ C+H T G +C C G+YR P
Sbjct: 306 QSCNCYGHAHDCYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSP 365
Query: 86 SRPITHRKACKK 97
P+ AC++
Sbjct: 366 DHPLDSPHACRR 377
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 15/58 (25%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR----DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ R DP+ P
Sbjct: 1786 CQCHGHSDRC--------LPG---SGVCVGCQHNTEGDHCERCQAGFVRTGSEDPAAP 1832
>gi|351697527|gb|EHB00446.1| Usherin [Heterocephalus glaber]
Length = 3949
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 15 GGEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAG 71
GG+ F C + C C+NH+ C ++ + GR GGVC C+H TAG
Sbjct: 562 GGDQAHTFTC--------KPCQCHNHSTSCHYDASVDPFPLELGRGGGGVCDACQHHTAG 613
Query: 72 RHCHYCKEGYYRDPSRPITHRKACK 96
R+C CK+ ++R+ + CK
Sbjct: 614 RNCELCKDYFFREVGAEPSAADVCK 638
>gi|301780748|ref|XP_002925791.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5-like
[Ailuropoda melanoleuca]
Length = 3514
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + + GGVC+ C+H T G +C C G+YR P
Sbjct: 292 QSCNCHGHAHDCFYDPEVDRRNASRNQDNVFQGGGVCIDCQHHTTGINCERCLPGFYRAP 351
Query: 86 SRPITHRKACKK 97
P+ AC++
Sbjct: 352 DHPLDSPHACRR 363
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 15/58 (25%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR----DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC +C+ G+ R DP P
Sbjct: 1782 CQCHGHSDRC--------LPG---SGVCVGCQHNTEGDHCEHCRAGFVRSGSEDPMAP 1828
>gi|27545303|ref|NP_775383.1| laminin subunit beta-4 precursor [Danio rerio]
gi|82243519|sp|Q8JHV6.1|LAMB4_DANRE RecName: Full=Laminin subunit beta-4; Flags: Precursor
gi|21538981|gb|AAM61768.1|AF468050_1 laminin beta 4 [Danio rerio]
Length = 1827
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNC++H+ KC F + Y +G SGGVC CR+ G C C YY+DP R + A
Sbjct: 334 CNCHSHSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQDPQRSVDDPYA 393
Query: 95 C 95
C
Sbjct: 394 C 394
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDP 85
G CL CR +AGR+C C+EGY DP
Sbjct: 961 GDCLDCREHSAGRNCERCEEGYVGDP 986
>gi|397479157|ref|XP_003810894.1| PREDICTED: laminin subunit alpha-5, partial [Pan paniscus]
Length = 3640
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 302 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP 361
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 362 NHPLDSPHVCRR 373
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY---RDPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1809 CQCHGHSDRC--------LPG---SGVCVDCQHNTEGAHCERCQAGFVSSREDPSAP 1854
>gi|410341923|gb|JAA39908.1| laminin, alpha 5 [Pan troglodytes]
Length = 3695
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 357 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP 416
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 417 NHPLDSPHVCRR 428
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY---RDPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1864 CQCHGHSDRC--------LPG---SGVCVDCQHNTEGAHCERCQAGFVSSREDPSAP 1909
>gi|410296062|gb|JAA26631.1| laminin, alpha 5 [Pan troglodytes]
Length = 3695
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 357 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP 416
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 417 NHPLDSPHVCRR 428
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY---RDPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1864 CQCHGHSDRC--------LPG---SGVCVDCQHNTEGAHCERCQAGFVSSREDPSAP 1909
>gi|410219770|gb|JAA07104.1| laminin, alpha 5 [Pan troglodytes]
gi|410251710|gb|JAA13822.1| laminin, alpha 5 [Pan troglodytes]
Length = 3695
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 357 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP 416
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 417 NHPLDSPHVCRR 428
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY---RDPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1864 CQCHGHSDRC--------LPG---SGVCVDCQHNTEGAHCERCQAGFVSSREDPSAP 1909
>gi|119904223|ref|XP_597117.3| PREDICTED: laminin subunit gamma-3 [Bos taurus]
Length = 1663
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ EL++ SG GG CL CR TAG HC C+E +YR P P
Sbjct: 414 CNCSGHSEECTFDRELFRSSGH--GGRCLHCRAHTAGPHCERCQENFYRWSPQTP 466
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 917 GRCLRCLHNTTGAHCGHCREGFYGSALAP 945
>gi|444714593|gb|ELW55473.1| Usherin [Tupaia chinensis]
Length = 5016
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGR 72
G+ + F C + C C++H+R C +N+ + GR GGVC C H T GR
Sbjct: 560 GDQVHAFNC--------KPCQCHSHSRSCHYNISVDPFPLEHGRGGGGVCDNCEHNTTGR 611
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 612 NCELCKDYFFRLVGADPS 629
>gi|348536170|ref|XP_003455570.1| PREDICTED: hypothetical protein LOC100709370 [Oreochromis
niloticus]
Length = 1113
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 30 IFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPI 89
+ FQ C CN H+ +C + ++ + C+ C+H T G++C YC+ GYY++ S P+
Sbjct: 933 VSFQDCECNGHSNRCSY-IDFINVV------TCVSCKHNTRGQNCQYCRLGYYQNASLPL 985
Query: 90 THRKAC 95
T C
Sbjct: 986 TDENVC 991
>gi|21264602|ref|NP_005551.3| laminin subunit alpha-5 precursor [Homo sapiens]
gi|317373598|sp|O15230.8|LAMA5_HUMAN RecName: Full=Laminin subunit alpha-5; AltName: Full=Laminin-10
subunit alpha; AltName: Full=Laminin-11 subunit alpha;
AltName: Full=Laminin-15 subunit alpha; Flags: Precursor
Length = 3695
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 357 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP 416
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 417 NHPLDSPHVCRR 428
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR---DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1864 CQCHGHSDRC--------LPG---SGVCVDCQHNTEGAHCERCQAGFVSSRDDPSAP 1909
>gi|306921185|dbj|BAJ17672.1| laminin, alpha 5 [synthetic construct]
Length = 3690
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 357 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP 416
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 417 NHPLDSPHVCRR 428
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR---DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1864 CQCHGHSDRC--------LPG---SGVCVDCQHNTEGAHCERCQAGFMSSRDDPSAP 1909
>gi|198426371|ref|XP_002125100.1| PREDICTED: similar to usherin [Ciona intestinalis]
Length = 5474
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 20 KKFRCSSRDRIF-FQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGRHCH 75
K FR D + Q C C+ HA C + L G R GGVC C H TAGRHC
Sbjct: 582 KPFRIGDTDSSYDCQQCECHQHALSCHYEEGLDPNPGDHFRGGGGVCDDCLHNTAGRHCE 641
Query: 76 YCKEGYYRDPSRPITHRKACK 96
C +YR R + CK
Sbjct: 642 QCATLFYRMSERALEAVDVCK 662
>gi|297259425|ref|XP_002798118.1| PREDICTED: laminin subunit alpha-5-like [Macaca mulatta]
Length = 3350
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 357 QSCNCHGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP 416
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 417 DHPLDSPHVC 426
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY---RDPSRP 88
C C+ H+ +C L G G+C+ C+H T G C C+ G+ DPS P
Sbjct: 1714 CQCHGHSDRC--------LPG---SGICVDCQHNTEGAQCERCQAGFVSSREDPSAP 1759
>gi|410953440|ref|XP_003983378.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Felis
catus]
Length = 3394
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + + GGVC+ C+H T G +C C G++R P
Sbjct: 317 QSCNCHGHAHDCFYDPEVDRRNASQNLDGAYQGGGVCIDCQHHTTGINCERCLPGFFRAP 376
Query: 86 SRPITHRKACKK 97
+P+ AC++
Sbjct: 377 DQPLDSPHACRR 388
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 15/58 (25%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR----DPSRP 88
C C+ H+ +C L G GVC C+H T G C +C+ G+ R DP+ P
Sbjct: 1655 CQCHGHSDRC--------LPG---SGVCEGCQHNTEGDRCEHCQAGFVRSGSEDPTAP 1701
>gi|426226089|ref|XP_004007186.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-3 [Ovis
aries]
Length = 1632
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ EL++ SG GG CL+CR TAG HC C++ +YR +P P
Sbjct: 412 CNCSGHSEQCTFDRELFRSSGH--GGRCLRCRAHTAGPHCERCQKNFYRWNPRTP 464
>gi|426240252|ref|XP_004014026.1| PREDICTED: usherin [Ovis aries]
Length = 5187
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 15/77 (19%)
Query: 17 EHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMEL--YKLSG-RSSGGVCLQCRHFTAGRH 73
+H+ F C + C CN+H+R C +N+ + + L R GGVC C H TAG++
Sbjct: 565 DHVHAFNC--------KPCECNSHSRSCHYNISVDPFPLEHYRGGGGVCDDCEHNTAGKN 616
Query: 74 CHYCKEGYYR----DPS 86
C CK+ ++R DPS
Sbjct: 617 CEQCKDYFFRQVGADPS 633
>gi|71081706|gb|AAZ23164.1| usherin [Mus musculus]
Length = 5193
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 19/88 (21%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGR 72
G+++ F C + C C+ HA C ++ + R GGVC C+H T GR
Sbjct: 561 GDNVNAFNC--------KPCQCHGHASSCHYDASVDPFPLEHNRGGGGVCDDCQHHTTGR 612
Query: 73 HCHYCKEGYYR----DPSRPITHRKACK 96
HC C++ +YR DP+ P ACK
Sbjct: 613 HCESCQDYFYRSVGADPAAP----DACK 636
>gi|145699097|ref|NP_067383.3| usherin precursor [Mus musculus]
gi|342187108|sp|Q2QI47.2|USH2A_MOUSE RecName: Full=Usherin; AltName: Full=Usher syndrome type IIa
protein homolog; AltName: Full=Usher syndrome type-2A
protein homolog; Flags: Precursor
Length = 5193
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 19/88 (21%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGR 72
G+++ F C + C C+ HA C ++ + R GGVC C+H T GR
Sbjct: 561 GDNVNAFNC--------KPCQCHGHASSCHYDASVDPFPLEHNRGGGGVCDDCQHHTTGR 612
Query: 73 HCHYCKEGYYR----DPSRPITHRKACK 96
HC C++ +YR DP+ P ACK
Sbjct: 613 HCESCQDYFYRPVGADPAAP----DACK 636
>gi|300794294|ref|NP_001178354.1| usherin [Bos taurus]
Length = 5204
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 15/77 (19%)
Query: 17 EHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGRH 73
+H+ F C + C CN+H+R C +N+ + R GGVC C H TAG++
Sbjct: 565 DHVHAFNC--------KPCECNSHSRSCHYNISVDPFPFEHYRGGGGVCDDCEHNTAGKN 616
Query: 74 CHYCKEGYYR----DPS 86
C CK+ ++R DPS
Sbjct: 617 CELCKDYFFRQVGADPS 633
>gi|47218347|emb|CAG04179.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1085
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C HA C F+M +Y +G SGGVC C+H T GR C C Y++ P+R
Sbjct: 337 CECKQHATTCHFDMAVYMTTGNVSGGVCDDCKHNTMGRQCELCAPFYFQHPNRDPRDPNV 396
Query: 95 CKK 97
C+
Sbjct: 397 CEP 399
>gi|440900086|gb|ELR51295.1| Laminin subunit gamma-3, partial [Bos grunniens mutus]
Length = 1528
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ EL++ SG GG CL CR TAG HC C+E +YR P P
Sbjct: 256 CNCSGHSEECTFDRELFRSSGH--GGRCLHCRAHTAGPHCERCQENFYRWSPQTP 308
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 770 GRCLRCLHNTTGAHCGHCREGFYGSALAP 798
>gi|444707679|gb|ELW48917.1| Laminin subunit alpha-5 [Tupaia chinensis]
Length = 3484
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q CNC+ HA C ++ E+ + + + GGVC+ C+H T G +C C G+YR P
Sbjct: 264 QPCNCHGHAHDCYYDPEVAQRNASQNQDNVFQGGGVCIDCQHHTTGVNCERCLPGFYRAP 323
Query: 86 SRPITHRKACKK 97
P+ C++
Sbjct: 324 DHPLHSPHVCRR 335
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY-RDPSRPITHRK 93
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ +P+ P
Sbjct: 1745 CQCHGHSDRC--------LPG---SGVCVGCQHNTEGDHCERCRPGFLSSEPADPTAACI 1793
Query: 94 AC 95
+C
Sbjct: 1794 SC 1795
>gi|300798041|ref|NP_001178538.1| laminin subunit alpha-5 precursor [Rattus norvegicus]
gi|149034036|gb|EDL88819.1| laminin, alpha 5, isoform CRA_a [Rattus norvegicus]
Length = 3713
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + + GGVCL C+H T G +C C G+YR P
Sbjct: 361 QSCNCHGHAYDCYYDPEVDRRNASQNLDNVYQGGGVCLDCQHHTTGINCERCVPGFYRAP 420
Query: 86 SRPITHRKACK 96
+P+ C+
Sbjct: 421 DQPLDSPHVCQ 431
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 12/62 (19%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY-RDPSRPITHRK 93
C C+ H+ +C L G G C+ C+H T G C C+ G+ DPS P +
Sbjct: 1864 CQCHGHSDRC--------LPG---SGTCVGCQHNTEGDQCERCRPGFVSSDPSDPASPCV 1912
Query: 94 AC 95
+C
Sbjct: 1913 SC 1914
>gi|296479337|tpg|DAA21452.1| TPA: Usher syndrome 2A (autosomal recessive, mild) [Bos taurus]
Length = 5252
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 15/77 (19%)
Query: 17 EHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGRH 73
+H+ F C + C CN+H+R C +N+ + R GGVC C H TAG++
Sbjct: 565 DHVHAFNC--------KPCECNSHSRSCHYNISVDPFPFEHYRGGGGVCDDCEHNTAGKN 616
Query: 74 CHYCKEGYYR----DPS 86
C CK+ ++R DPS
Sbjct: 617 CELCKDYFFRQVGADPS 633
>gi|348577027|ref|XP_003474286.1| PREDICTED: usherin-like [Cavia porcellus]
Length = 5203
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 20 KKFRCSSRDRIFF-QTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGRHCH 75
K FR F + C C+ HA C +N L GR GGVC C+H TAGR+C
Sbjct: 559 KPFRAGDEAHAFACKPCQCHGHATSCHYNASLDPFPLEHGRGGGGVCDACQHHTAGRNCE 618
Query: 76 YCKEGYYR----DPS 86
C++ ++R DPS
Sbjct: 619 LCEDYFFRQVGADPS 633
>gi|338720346|ref|XP_001499447.3| PREDICTED: laminin subunit gamma-3, partial [Equus caballus]
Length = 1458
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNC+ H+ +C F+ EL++ +G GG CL+CR TAG HC C+E +YR
Sbjct: 209 CNCSGHSEECTFDRELFRSTGH--GGRCLRCRDHTAGPHCERCQENFYR 255
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C++GYY P
Sbjct: 712 GHCLRCLHNTTGAHCEHCQDGYYGSALAP 740
>gi|363731756|ref|XP_419417.3| PREDICTED: usherin [Gallus gallus]
Length = 5209
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + + C + C C +HA C +++E+ R SGGVC C+H T GR
Sbjct: 565 GDQVHAYNC--------KPCQCYSHAVSCHYDLEMDPFPQEYYRGSGGVCDNCQHNTTGR 616
Query: 73 HCHYCKEGYYRDPSRPITHRKACK 96
+C CK+ +YR ++ CK
Sbjct: 617 NCELCKDFHYRQAGADLSAIDVCK 640
>gi|326931919|ref|XP_003212071.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5-like
[Meleagris gallopavo]
Length = 3565
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q CNCN HA C ++ E+ + S GGVC+ C+H T G +C C GYYR P
Sbjct: 260 QPCNCNGHAYDCYYDPEVDRHKASKSREDKYEGGGVCIDCQHHTTGVNCERCIPGYYRSP 319
Query: 86 SRPITHRKAC 95
PI C
Sbjct: 320 DHPIDSPYIC 329
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 11/47 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGY 81
C+CN H+ +C L G G+CL C+H T G HC CK+GY
Sbjct: 1733 CHCNGHSDQC--------LPG---SGICLNCQHNTEGDHCEQCKDGY 1768
>gi|363741472|ref|XP_003642506.1| PREDICTED: laminin subunit alpha-5, partial [Gallus gallus]
Length = 3601
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q CNCN HA C ++ E+ + S GGVC+ C+H T G +C C GYYR P
Sbjct: 266 QPCNCNGHAYDCYYDPEVDRHKASKSREDKFEGGGVCIDCQHHTTGVNCERCIPGYYRSP 325
Query: 86 SRPITHRKAC 95
PI C
Sbjct: 326 DHPIDSPYIC 335
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 11/47 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGY 81
C+CN H+ +C L G G+CL C+H T G HC CK+GY
Sbjct: 1768 CHCNGHSDQC--------LPG---SGICLNCQHNTEGDHCEQCKDGY 1803
>gi|156400068|ref|XP_001638822.1| predicted protein [Nematostella vectensis]
gi|156225946|gb|EDO46759.1| predicted protein [Nematostella vectensis]
Length = 906
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSS---GGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
C CNNHA C +N L + GGVC+ C H TAG+ CH C++ ++R+P + ++
Sbjct: 532 CECNNHATACYYNSSLDPSPASRTVGGGGVCINCLHNTAGQFCHVCRDDFFREPGKSLSA 591
Query: 92 RKACKK 97
C
Sbjct: 592 VDVCSP 597
>gi|444706431|gb|ELW47773.1| Laminin subunit beta-3 [Tupaia chinensis]
Length = 1415
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPIT 90
Q C+CN H+ C F+ ++ S + GGVC CR T GR+C C+ Y+R+ PS PI
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGTHGGVCDNCRDHTEGRNCERCQLHYFRNRRPSAPI- 372
Query: 91 HRKAC 95
++AC
Sbjct: 373 -QEAC 376
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 34 TCNCNNHARKC--RFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
+C CN HA +C R + VC+ C+H TAG HC C Y+ P P
Sbjct: 249 SCFCNGHADRCAPRPGAPASPSTAVQVHDVCV-CQHNTAGAHCERCAPFYHNRPWSP 304
>gi|410908689|ref|XP_003967823.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-4-like
[Takifugu rubripes]
Length = 1750
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNC+ H+ C F++ ++ +G SGGVC CRH G C C+ +Y+DP R +A
Sbjct: 284 CNCHGHSETCHFDIARFEATGGVSGGVCDNCRHGRTGPQCELCQPFFYQDPRRAKDDPQA 343
Query: 95 C 95
C
Sbjct: 344 C 344
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C CN + +C G CL CR T G +C C+EGYY DP+
Sbjct: 856 CQCNGMSEECD-----------PQTGECLSCREHTVGPNCDRCEEGYYGDPT 896
>gi|359320462|ref|XP_548411.3| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-3 [Canis
lupus familiaris]
Length = 1504
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ EL++ +G GG CL+CR TAG HC C+E +YR P P
Sbjct: 255 CNCSGHSEECVFDRELFRSTGH--GGRCLRCRDHTAGPHCERCQEDFYRWSPRTP 307
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 57 SSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
S G CL+C H T G HC C++G+Y P
Sbjct: 755 SQSGHCLRCLHNTTGAHCERCQDGFYGSALAP 786
>gi|157822365|ref|NP_001101300.1| laminin subunit gamma-3 precursor [Rattus norvegicus]
gi|149039043|gb|EDL93263.1| laminin gamma 3 (predicted), isoform CRA_b [Rattus norvegicus]
Length = 1580
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ ELY+ +G GG C +CR TAG HC +C++ YYR DP P
Sbjct: 336 CNCSGHSEECTFDRELYRSTGH--GGHCQRCRDHTAGPHCEHCEKNYYRWDPKTP 388
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 43 KCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYY 82
+C N++L + G CL+C H T G HC +C+EG+Y
Sbjct: 823 QCSRNVDLNAVGNCDPHSGRCLRCLHNTTGAHCEHCQEGFY 863
>gi|301758872|ref|XP_002915292.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-3-like,
partial [Ailuropoda melanoleuca]
Length = 1519
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNC+ H+ +C F+ EL++ +G GG CL+CR TAG HC C+E +YR
Sbjct: 272 CNCSGHSEECAFDRELFRSTGH--GGRCLRCRDHTAGPHCERCQEDFYR 318
>gi|124487155|ref|NP_001074640.1| laminin subunit alpha-5 precursor [Mus musculus]
gi|341941134|sp|Q61001.4|LAMA5_MOUSE RecName: Full=Laminin subunit alpha-5; AltName: Full=Laminin-10
subunit alpha; AltName: Full=Laminin-11 subunit alpha;
AltName: Full=Laminin-15 subunit alpha; Flags: Precursor
Length = 3718
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + + GGVCL C+H T G +C C G++R P
Sbjct: 362 QSCNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAP 421
Query: 86 SRPITHRKACK 96
+P+ C+
Sbjct: 422 DQPLDSPHVCR 432
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY-RDPSRPITHRK 93
C C+ H+ +C L G G+C+ C+H T G C C+ G+ DPS P +
Sbjct: 1865 CQCHGHSDRC--------LPG---SGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCV 1913
Query: 94 AC 95
+C
Sbjct: 1914 SC 1915
>gi|148675373|gb|EDL07320.1| mCG6728, isoform CRA_b [Mus musculus]
Length = 3714
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + + GGVCL C+H T G +C C G++R P
Sbjct: 362 QSCNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAP 421
Query: 86 SRPITHRKACK 96
+P+ C+
Sbjct: 422 DQPLDSPHVCR 432
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY-RDPSRPITHRK 93
C C+ H+ +C L G G+C+ C+H T G C C+ G+ DPS P +
Sbjct: 1865 CQCHGHSDRC--------LPG---SGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCV 1913
Query: 94 AC 95
+C
Sbjct: 1914 SC 1915
>gi|17998677|gb|AAL54876.1| laminin alpha 3 [Canis lupus familiaris]
Length = 1725
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 11/50 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
CNCN H+ +C+ G+C+ C+H TAG HC CKEG+YR+
Sbjct: 78 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCKEGHYRN 116
>gi|345803360|ref|XP_003435053.1| PREDICTED: laminin subunit alpha-3 isoform 3 [Canis lupus
familiaris]
Length = 1669
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 11/50 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
CNCN H+ +C+ G+C+ C+H TAG HC CKEG+YR+
Sbjct: 78 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCKEGHYRN 116
>gi|148675372|gb|EDL07319.1| mCG6728, isoform CRA_a [Mus musculus]
Length = 3635
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + + GGVCL C+H T G +C C G++R P
Sbjct: 279 QSCNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAP 338
Query: 86 SRPITHRKACK 96
+P+ C+
Sbjct: 339 DQPLDSPHVCR 349
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY-RDPSRPITHRK 93
C C+ H+ +C L G G+C+ C+H T G C C+ G+ DPS P +
Sbjct: 1782 CQCHGHSDRC--------LPG---SGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCV 1830
Query: 94 AC 95
+C
Sbjct: 1831 SC 1832
>gi|345803355|ref|XP_003435051.1| PREDICTED: laminin subunit alpha-3 isoform 1 [Canis lupus
familiaris]
Length = 1725
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 11/50 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
CNCN H+ +C+ G+C+ C+H TAG HC CKEG+YR+
Sbjct: 78 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCKEGHYRN 116
>gi|344296458|ref|XP_003419924.1| PREDICTED: usherin [Loxodonta africana]
Length = 5205
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H+R C +++ + R GGVC C H T GR
Sbjct: 564 GDQVHAFNC--------KPCQCNSHSRSCHYDISVDPFPAEHRRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVDADPS 633
>gi|2599232|gb|AAC53430.1| laminin alpha 5 chain [Mus musculus]
Length = 3635
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + + GGVCL C+H T G +C C G++R P
Sbjct: 279 QSCNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAP 338
Query: 86 SRPITHRKACK 96
+P+ C+
Sbjct: 339 DQPLDSPHVCR 349
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY-RDPSRPITHRK 93
C C+ H+ +C L G G+C+ C+H T G C C+ G+ DPS P +
Sbjct: 1782 CQCHGHSDRC--------LPG---SGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCV 1830
Query: 94 AC 95
+C
Sbjct: 1831 SC 1832
>gi|1586274|prf||2203365A laminin alpha5
Length = 3610
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + + GGVCL C+H T G +C C G++R P
Sbjct: 279 QSCNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAP 338
Query: 86 SRPITHRKACK 96
+P+ C+
Sbjct: 339 DQPLDSPHVCR 349
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY-RDPSRPITHRK 93
C C+ H+ +C L G G+C+ C+H T G C C+ G+ DPS P +
Sbjct: 1782 CQCHGHSDRC--------LPG---SGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCV 1830
Query: 94 AC 95
+C
Sbjct: 1831 SC 1832
>gi|449486448|ref|XP_004186136.1| PREDICTED: LOW QUALITY PROTEIN: laminin, alpha 5 [Taeniopygia
guttata]
Length = 2547
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q CNCN HA C ++ E+ + S GGVC+ C+H T G +C C GYYR P
Sbjct: 353 QPCNCNGHAYDCYYDPEVDRHKASRSREDKFEGGGVCIDCQHHTTGINCERCIPGYYRSP 412
Query: 86 SRPITHRKAC 95
PI C
Sbjct: 413 DHPIDSPYVC 422
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
C+CN H+ +C L G G+CL C+H T G HC CK+GY PS
Sbjct: 2084 CHCNGHSDQC--------LPGS---GICLNCQHNTEGDHCERCKDGYMGSPS 2124
>gi|441639302|ref|XP_003281581.2| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Nomascus
leucogenys]
Length = 3593
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
CNC+ HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 346 CNCHGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPDH 405
Query: 88 PITHRKACKK 97
P+ C++
Sbjct: 406 PLDSPHVCRR 415
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY---RDPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1795 CQCHGHSDRC--------LPG---SGVCVDCQHNTEGAHCERCQAGFVSSGEDPSAP 1840
>gi|114572620|ref|XP_514197.2| PREDICTED: usherin [Pan troglodytes]
Length = 5202
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNM--ELYKLSG-RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ +L+ R GGVC C H T GR
Sbjct: 564 GDQVYAFNC--------KPCQCNSHSKSCHYNISVDLFPFEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVGADPS 633
>gi|54648634|gb|AAH85017.1| LAMA5 protein [Homo sapiens]
Length = 561
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H TAG +C C G+YR P
Sbjct: 357 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTAGVNCERCLPGFYRSP 416
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 417 NHPLDSPHVCRR 428
>gi|397486158|ref|XP_003814198.1| PREDICTED: usherin [Pan paniscus]
Length = 5202
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNM--ELYKLSG-RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ +L+ R GGVC C H T GR
Sbjct: 564 GDQVYAFNC--------KPCQCNSHSKSCHYNISVDLFPFEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVGADPS 633
>gi|85677493|ref|NP_001034260.1| laminin subunit alpha-5 precursor [Danio rerio]
gi|81171109|gb|ABB58781.1| laminin alpha 5 [Danio rerio]
Length = 3664
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMEL------YKLSGR-SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H+ +C ++ E+ + G + GGVC++C+H T G +C C GYYR P
Sbjct: 349 EPCNCHRHSSECYYDPEIDQRRSSLDMQGEYNGGGVCVECQHHTTGVNCERCIPGYYRSP 408
Query: 86 SRPITHRKACKK 97
P+ AC K
Sbjct: 409 DHPLESPFACSK 420
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
CNCN H+ +C L G G+C+ CRH TAG HC C G++ +
Sbjct: 1843 CNCNGHSDQC--------LDG---SGICVNCRHNTAGNHCEKCLGGFHHN 1881
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
Q CNCN ++ + + L+G C C H TAG HC C G+Y D
Sbjct: 1948 QPCNCNGNSDPNMLFSDCHPLTGE-----CQSCMHNTAGPHCEICAPGFYGD 1994
>gi|344236451|gb|EGV92554.1| Usherin [Cricetulus griseus]
Length = 1735
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 33 QTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGRHCHYCKEGYYR----DP 85
+ C CNNHAR C ++ + R GGVC C+H T GR+C C++ +YR DP
Sbjct: 129 KPCQCNNHARSCHYDASVDPFPLEHSRGGGGVCDNCQHHTTGRNCESCQDYFYRPIGADP 188
Query: 86 S 86
S
Sbjct: 189 S 189
>gi|297578324|gb|ADI46647.1| laminin alpha 5 [Danio rerio]
Length = 3664
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMEL------YKLSGR-SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H+ +C ++ E+ + G + GGVC++C+H T G +C C GYYR P
Sbjct: 349 EPCNCHRHSSECYYDPEIDQRRSSLDMQGEYNGGGVCVECQHHTTGVNCERCIPGYYRSP 408
Query: 86 SRPITHRKACKK 97
P+ AC K
Sbjct: 409 DHPLESPFACSK 420
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
CNCN H+ +C L G G+C+ CRH TAG HC C G++ +
Sbjct: 1843 CNCNGHSDQC--------LDG---SGICVNCRHNTAGNHCEKCLGGFHHN 1881
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
Q CNCN ++ + + L+G C C H TAG HC C G+Y D
Sbjct: 1948 QPCNCNGNSDPNMLFSDCHPLTGE-----CQSCMHNTAGPHCEICAPGFYGD 1994
>gi|332849577|ref|XP_003315870.1| PREDICTED: laminin subunit alpha-3 [Pan troglodytes]
Length = 1668
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC +C+EGYY
Sbjct: 78 CNCNGHSNRCQ-----------DGSGICVNCQHNTAGEHCEHCQEGYY 114
>gi|332849573|ref|XP_003315869.1| PREDICTED: laminin subunit alpha-3 [Pan troglodytes]
Length = 1724
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC +C+EGYY
Sbjct: 78 CNCNGHSNRCQ-----------DGSGICVNCQHNTAGEHCEHCQEGYY 114
>gi|350589114|ref|XP_003130413.2| PREDICTED: laminin subunit gamma-2-like, partial [Sus scrofa]
Length = 1296
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 25 SSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
SS D C+CN +R+C F+ EL++L+G +G CL C TAG HC CKEG+YR
Sbjct: 123 SSSDHSHKPLCDCNGKSRQCLFDQELHRLTG--NGFRCLHCSDNTAGIHCEKCKEGFYR 179
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + L+GR CL+C H TAG HC CK GY+ DP P
Sbjct: 620 QPCQCNNNVDP-SASGNCDHLTGR-----CLKCIHNTAGAHCEQCKVGYFGDPLAP 669
>gi|403277507|ref|XP_003930400.1| PREDICTED: usherin [Saimiri boliviensis boliviensis]
Length = 5203
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 564 GDQVHAFNC--------KPCQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVGADPS 633
>gi|296230105|ref|XP_002760562.1| PREDICTED: usherin [Callithrix jacchus]
Length = 5203
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 564 GDQVHAFNC--------KPCQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVGADPS 633
>gi|323714365|pdb|2Y38|A Chain A, Laminin Alpha5 Chain N-Terminal Fragment
Length = 403
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + GGVCL C+H T G +C C G++R P
Sbjct: 323 QSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAP 382
Query: 86 SRPITHRKACK 96
+P+ C+
Sbjct: 383 DQPLDSPHVCR 393
>gi|149015651|gb|EDL75010.1| similar to Laminin alpha-3 chain precursor (Nicein alpha subunit),
isoform CRA_b [Rattus norvegicus]
Length = 1725
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ GVC+ C+H TAG HC C+EGYY
Sbjct: 78 CNCNGHSNRCQ-----------DGSGVCINCQHNTAGEHCERCQEGYY 114
>gi|256085389|ref|XP_002578904.1| laminin gamma-1 chain [Schistosoma mansoni]
Length = 1259
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT 90
CNCN +A C F+ ELY +G SG C+ C + T G +C CK GYY +P +P T
Sbjct: 339 ACNCNGNAHLCEFDPELYSRTG--SGSRCIDCGNNTEGLNCERCKSGYYPNPKQPTT 393
>gi|360045543|emb|CCD83091.1| putative laminin gamma-1 chain [Schistosoma mansoni]
Length = 1259
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT 90
CNCN +A C F+ ELY +G SG C+ C + T G +C CK GYY +P +P T
Sbjct: 339 ACNCNGNAHLCEFDPELYSRTG--SGSRCIDCGNNTEGLNCERCKSGYYPNPKQPTT 393
>gi|149039042|gb|EDL93262.1| laminin gamma 3 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 1212
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ ELY+ +G GG C +CR TAG HC +C++ YYR DP P
Sbjct: 336 CNCSGHSEECTFDRELYRSTGH--GGHCQRCRDHTAGPHCEHCEKNYYRWDPKTP 388
>gi|348041324|ref|NP_001231686.1| usherin isoform 1 [Rattus norvegicus]
Length = 5164
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 20 KKFRCSSRDRIF-FQTCNCNNHARKCRFN--MELYKLS-GRSSGGVCLQCRHFTAGRHCH 75
K FR ++ F + C C+ HA C ++ M+ + L R GGVC C+H T GR+C
Sbjct: 594 KPFRSGNKVHAFNCKPCQCHGHASSCHYDASMDPFPLEYNRGGGGVCDDCQHHTTGRNCE 653
Query: 76 YCKEGYYR----DPSRP 88
C++ +YR DP+ P
Sbjct: 654 SCQDYFYRPIGADPADP 670
>gi|426240555|ref|XP_004014164.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-3 [Ovis aries]
Length = 1006
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S + GGVC CR T GR+C C+ Y+R+ P PI
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGRNCERCQLHYFRNRRPGAPI 372
>gi|350579718|ref|XP_003480667.1| PREDICTED: laminin subunit gamma-3-like, partial [Sus scrofa]
Length = 874
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ EL++ SG GG CL CR TAG HC C+E +YR +P P
Sbjct: 326 PCNCSGHSEECIFDRELFRTSGH--GGRCLHCRDHTAGPHCERCQENFYRWNPQMP 379
>gi|443688981|gb|ELT91503.1| hypothetical protein CAPTEDRAFT_172041 [Capitella teleta]
Length = 1601
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
Q CNCN+ + +C F+ E+Y +G GG CL CR TAG HC CK+ YYR
Sbjct: 307 QPCNCNHFSDRCFFDEEMYAQTGH--GGHCLDCRDNTAGPHCERCKDDYYR 355
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 12/48 (25%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C+CN H+ C N G C+ C+H T G HC C GYY
Sbjct: 695 CDCNGHSDACDINT-----------GRCI-CQHNTQGDHCEQCASGYY 730
>gi|219842266|ref|NP_996816.2| usherin isoform B [Homo sapiens]
Length = 5202
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 564 GDQVYAFNC--------KPCQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVGADPS 633
>gi|91207975|sp|O75445.3|USH2A_HUMAN RecName: Full=Usherin; AltName: Full=Usher syndrome type IIa
protein; AltName: Full=Usher syndrome type-2A protein;
Flags: Precursor
gi|44804677|gb|AAS47698.1| Usher syndrome 2A isoform B [Homo sapiens]
Length = 5202
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 564 GDQVYAFNC--------KPCQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVGADPS 633
>gi|334325858|ref|XP_001365508.2| PREDICTED: laminin subunit alpha-3 [Monodelphis domestica]
Length = 3369
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ +L G GGVC+ C+H TAG +C C +GYYR
Sbjct: 350 EACNCHGHATDCYYDPDIERLKGSLNIHGVYEGGGVCINCQHNTAGVNCERCLQGYYRPY 409
Query: 86 SRPITHRKAC 95
+ P+ C
Sbjct: 410 NVPVEAPHGC 419
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
CNCN H+ +C+ G C+ C+H TAG +C CKEGYY D
Sbjct: 1718 CNCNGHSNRCQ-----------DGSGTCINCQHNTAGTNCERCKEGYYGD 1756
>gi|432116585|gb|ELK37378.1| Laminin subunit gamma-3 [Myotis davidii]
Length = 1286
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+CNC+ H+ +C F+ +L++ +G GG CL CR+ TAG C C+E +YR
Sbjct: 163 SCNCSGHSEQCVFDQQLFRSTGH--GGRCLHCRNHTAGPRCQLCQENFYR 210
>gi|313229713|emb|CBY18528.1| unnamed protein product [Oikopleura dioica]
Length = 3726
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 34 TCNCNNHARKCRF--NMELYKLSGRSSG-----GVCLQCRHFTAGRHCHYCKEGYYRDPS 86
CNC+ HA +C + N+E LS + G GVC+ C+H T G +C C+ G+YR+P+
Sbjct: 344 ACNCHQHAERCYYDENVERNGLSVSAEGIYEGGGVCVDCKHHTTGINCERCENGFYRNPA 403
Query: 87 RPITHRKAC 95
I +AC
Sbjct: 404 ADIIDVEAC 412
>gi|449495788|ref|XP_004175148.1| PREDICTED: LOW QUALITY PROTEIN: usherin [Taeniopygia guttata]
Length = 5209
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + + C + C C HA C +++ + R GGVC C+H TAGR
Sbjct: 565 GDQVHAYNC--------KPCQCYGHAESCHYDLAMDPFPQEHHRGGGGVCDNCQHNTAGR 616
Query: 73 HCHYCKEGYYRDPSRPITHRKACK 96
+C CK+ +YR ++ CK
Sbjct: 617 NCELCKDFHYRQAGADLSAIDVCK 640
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
+ CNCN + + L S GG C C+ +GR C+ C+EG+Y
Sbjct: 640 KACNCNATGTENK------SLLCDSIGGQC-NCKRHVSGRQCNQCQEGFY 682
>gi|410979384|ref|XP_003996065.1| PREDICTED: laminin subunit gamma-3 [Felis catus]
Length = 1540
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ +L++ G GG CL+CR TAG HC C+E +YR P P
Sbjct: 288 CNCSGHSEECVFDRDLFR--GTGHGGRCLRCRDHTAGPHCERCQEDFYRWSPRTP 340
>gi|292623256|ref|XP_697435.4| PREDICTED: Usherin [Danio rerio]
Length = 5334
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ ++ F C + C C HA C +N L G R GGVC C H T GR
Sbjct: 576 GDQIQAFNC--------RPCQCYGHASSCHYNSSLDPHPGEHFRGGGGVCDDCTHNTTGR 627
Query: 73 HCHYCKEGYYRDPSRPITHRKACK 96
+C C+ +YR+ + CK
Sbjct: 628 NCERCRSLFYREVGALLWATDVCK 651
>gi|403256752|ref|XP_003921016.1| PREDICTED: laminin subunit gamma-3 [Saimiri boliviensis
boliviensis]
Length = 1421
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +YR DP P
Sbjct: 307 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYRWDPRMP 359
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 736 GHCLRCLHNTTGDHCEHCQEGFYGSALSP 764
>gi|355558766|gb|EHH15546.1| hypothetical protein EGK_01653 [Macaca mulatta]
Length = 5225
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 563 GDQVHAFNC--------KRCQCNSHSKSCYYNVSVDPFPFEHFRGGGGVCNDCEHNTTGR 614
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 615 NCELCKDYFFRQVGADPS 632
>gi|431915873|gb|ELK16127.1| Laminin subunit beta-3 [Pteropus alecto]
Length = 1197
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPIT 90
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C++ Y+R+ P PI
Sbjct: 376 QRCDCNGHSETCHFDPAVFATSQGAHGGVCDNCRDHTEGKNCERCQQHYFRNRRPGAPI- 434
Query: 91 HRKAC 95
++AC
Sbjct: 435 -QEAC 438
>gi|390339642|ref|XP_003725054.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1-like
[Strongylocentrotus purpuratus]
Length = 1497
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNCN HA +C F+ ELY +G SGG C++CR T+G C C++ Y+R
Sbjct: 239 CNCNFHADRCFFDEELYNRTG--SGGHCMECRDETSGVSCERCRDNYFR 285
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 61 VCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
VC +C G C YC +GYY DP+ R AC
Sbjct: 693 VCTECPSGYVGNRCDYCADGYYGDPTGIQGQRTAC 727
>gi|410055412|ref|XP_003954422.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 [Pan
troglodytes]
Length = 1758
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 260 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP 319
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 320 NHPLDSPHVCRR 331
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY---RDPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1574 CQCHGHSDRC--------LPG---SGVCVDCQHNTEGAHCERCQAGFVSSREDPSAP 1619
>gi|297280786|ref|XP_002801987.1| PREDICTED: Usherin-like [Macaca mulatta]
Length = 5099
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 563 GDQVHAFNC--------KRCQCNSHSKSCYYNVSVDPFPFEHFRGGGGVCNDCEHNTTGR 614
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 615 NCELCKDYFFRQVGADPS 632
>gi|449691186|ref|XP_002165176.2| PREDICTED: usherin-like, partial [Hydra magnipapillata]
Length = 1353
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 33 QTCNCNNHARKCRFNMEL---YKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPI 89
+ C CNNHA C + L + + GGVC C+H T GR+C CK YYR + I
Sbjct: 61 KKCQCNNHADSCSYYRSLDANFNSRNSAGGGVCNSCKHNTMGRYCENCKPLYYRPKGKNI 120
Query: 90 THRKACK 96
+ C+
Sbjct: 121 SSIDVCQ 127
>gi|317419013|emb|CBN81051.1| Netrin-4 [Dicentrarchus labrax]
Length = 634
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 42/73 (57%)
Query: 25 SSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
SS D Q C C+ HA C F+ + SG +SGG+C CRH T GR C C+ GY+R
Sbjct: 323 SSGDSNPCQKCQCHGHADSCHFSQRAWLSSGGTSGGICDDCRHNTVGRRCQRCRRGYHRH 382
Query: 85 PSRPITHRKACKK 97
PS P+T AC +
Sbjct: 383 PSLPLTSAHACTR 395
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSG---GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
TC C+ HA C + ++ + + S G CL C H TAG HC C Y P RP
Sbjct: 263 TCLCHGHAEHCVPHNSSHQDTRQDSNKVPGRCL-CTHHTAGDHCEKCAPLYNDRPWRP 319
>gi|348576601|ref|XP_003474075.1| PREDICTED: laminin subunit alpha-3-like [Cavia porcellus]
Length = 3377
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRF--NME-----LYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H+ C + N+E L K + R GGVC+ C H TAG +C C EGYYR
Sbjct: 439 EACNCHGHSTDCYYDSNVEYQRRSLNKQNIREGGGVCINCEHNTAGVNCELCAEGYYRPH 498
Query: 86 SRPITHRKACKK 97
P+ C+
Sbjct: 499 GVPVEAPHGCRP 510
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNC+ H+ +C ++L G C+ C+H TAG+HC CKEG+Y
Sbjct: 1760 CNCHGHSDRC---LDLL--------GTCINCQHNTAGKHCERCKEGHY 1796
>gi|113865981|ref|NP_032510.2| laminin subunit beta-3 precursor [Mus musculus]
gi|341940891|sp|Q61087.2|LAMB3_MOUSE RecName: Full=Laminin subunit beta-3; AltName: Full=Epiligrin
subunit bata; AltName: Full=Kalinin B1 chain; AltName:
Full=Kalinin subunit beta; AltName: Full=Laminin-5
subunit beta; AltName: Full=Nicein subunit beta; Flags:
Precursor
gi|14250192|gb|AAH08516.1| Lamb3 protein [Mus musculus]
gi|74214803|dbj|BAE33428.1| unnamed protein product [Mus musculus]
gi|148680998|gb|EDL12945.1| laminin, beta 3, isoform CRA_a [Mus musculus]
gi|148680999|gb|EDL12946.1| laminin, beta 3, isoform CRA_a [Mus musculus]
Length = 1168
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S ++GGVC CR T G++C C+ Y+R+ PS PI
Sbjct: 311 QRCDCNGHSETCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNRRPSAPI 369
>gi|1620510|gb|AAB17053.1| laminin-5 alpha 3 chain [Rattus norvegicus]
Length = 1725
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ GVC+ C+H TAG HC CK GYY
Sbjct: 78 CNCNGHSNRCQ-----------DGSGVCINCQHNTAGEHCERCKRGYY 114
>gi|296230654|ref|XP_002760803.1| PREDICTED: laminin subunit beta-3 [Callithrix jacchus]
Length = 1172
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C+CN H+ C F+ ++ S + GGVC CR T GR+C C+ Y+R+ ++ +
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDNTEGRNCERCQLHYFRNRRPGVSIQ 373
Query: 93 KAC 95
+AC
Sbjct: 374 EAC 376
>gi|441603188|ref|XP_004087786.1| PREDICTED: laminin subunit alpha-3-like isoform 2 [Nomascus
leucogenys]
Length = 1668
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 78 CNCNGHSNRCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 114
>gi|56606911|gb|AAQ10303.1| alpha3A chain laminin [Equus caballus]
Length = 1732
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 11/50 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
C+CN H+ +C+ G+C+ C+H TAG HC CKEG+YR+
Sbjct: 83 CSCNGHSHRCQ-----------DGSGICINCQHNTAGNHCERCKEGHYRN 121
>gi|441603185|ref|XP_003262046.2| PREDICTED: laminin subunit alpha-3-like isoform 1 [Nomascus
leucogenys]
Length = 1724
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 78 CNCNGHSNRCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 114
>gi|402857216|ref|XP_003919666.1| PREDICTED: LOW QUALITY PROTEIN: usherin, partial [Papio anubis]
Length = 2881
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 322 GDQVHAFNC--------KRCQCNSHSKSCYYNVSVDPFPFEHFRGGGGVCNDCEHNTTGR 373
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 374 NCELCKDYFFRQVGADPS 391
>gi|395506727|ref|XP_003757682.1| PREDICTED: laminin subunit alpha-5 [Sarcophilus harrisii]
Length = 3765
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + GGVC+ C+H T G +C C GYYR P
Sbjct: 406 QSCNCHGHAHDCYYDPEVDRHRASKNRDNVYEGGGVCIDCQHHTTGINCERCVPGYYRSP 465
Query: 86 SRPITHRKAC 95
PI C
Sbjct: 466 EHPIDSPYVC 475
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CN H+ +C L G G+C+ C+H T G HC CK+G+ + ++
Sbjct: 1930 CHCNGHSDRC--------LPGS---GICVGCQHNTEGDHCERCKDGFVSNATQ 1971
>gi|417406038|gb|JAA49701.1| Putative netrin axonal chemotropic factor [Desmodus rotundus]
Length = 1172
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S S GGVC CR T GR+C C+ Y+R+ P PI
Sbjct: 314 QRCDCNGHSETCHFDPAVFANSQGSHGGVCDNCRDHTEGRNCERCQLHYFRNRRPGAPI 372
>gi|194227359|ref|XP_001915680.1| PREDICTED: LOW QUALITY PROTEIN: usherin [Equus caballus]
Length = 5202
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H+R C +++ + R GGVC C H T G+
Sbjct: 562 GDQVHAFNC--------KPCQCNSHSRSCHYDISVDPFPFEHHRGGGGVCDDCEHNTTGK 613
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 614 NCELCKDYFFRQVGADPS 631
>gi|432960246|ref|XP_004086428.1| PREDICTED: laminin subunit alpha-5-like [Oryzias latipes]
Length = 3993
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMEL------YKLSGR-SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC++HA +C ++ E+ + G GGVCL C+H T G +C C YYR P
Sbjct: 802 EACNCHHHAFECYYDPEIDRKRLSLDIHGHHRGGGVCLNCQHHTTGVNCERCIPTYYRSP 861
Query: 86 SRPITHRKAC 95
PI +AC
Sbjct: 862 DHPINSPQAC 871
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
Q CNCN ++ ++ + +G+ CL C H TAG HCH C G+Y D
Sbjct: 2399 QPCNCNGNSDPNMLFIDCHPQTGK-----CLSCMHNTAGDHCHLCAPGFYGD 2445
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C L G G+CL C+H TAG C C G+
Sbjct: 2294 CNCNGHSDQC--------LDG---SGLCLNCQHNTAGNQCEKCTGGFL 2330
>gi|149015650|gb|EDL75009.1| similar to Laminin alpha-3 chain precursor (Nicein alpha subunit),
isoform CRA_a [Rattus norvegicus]
Length = 1993
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ GVC+ C+H TAG HC C+EGYY
Sbjct: 346 CNCNGHSNRCQ-----------DGSGVCINCQHNTAGEHCERCQEGYY 382
>gi|395506301|ref|XP_003757473.1| PREDICTED: laminin subunit gamma-3 [Sarcophilus harrisii]
Length = 1559
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNC+ + +C ++ ELY+ +GR GG C CR TAG HC YC+E +YR
Sbjct: 306 CNCSGLSEECFYDWELYRSTGR--GGHCRNCRDHTAGPHCEYCQENFYR 352
>gi|350586014|ref|XP_003482093.1| PREDICTED: laminin subunit alpha-3 isoform 1 [Sus scrofa]
Length = 1725
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNC+ H+ +C+ G+C+ C+H TAG HC CKEGYY
Sbjct: 78 CNCHGHSNRCK-----------DGSGICINCQHNTAGEHCERCKEGYY 114
>gi|332017935|gb|EGI58584.1| Laminin subunit gamma-1 [Acromyrmex echinatior]
Length = 1497
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++ D + CNCN ++ +C F+ ELYKL+G GG CL CR G +C C+E YY
Sbjct: 230 RATTTDAHECKPCNCNGYSDRCYFDKELYKLTGH--GGHCLDCRANRDGANCERCRENYY 287
Query: 83 RDP 85
+ P
Sbjct: 288 QRP 290
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 12/51 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
CNCN HA C + G C+ C+H TAG +C C GYY P
Sbjct: 628 CNCNGHADICE-----------AETGQCI-CQHNTAGSNCELCSRGYYGYP 666
>gi|327277415|ref|XP_003223460.1| PREDICTED: laminin subunit gamma-2-like [Anolis carolinensis]
Length = 1153
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
Q C+CN +R+C F+ EL + +G +G VCL C T G HC CKEG+YR
Sbjct: 29 QACDCNGKSRQCMFDTELLRRTG--NGYVCLNCIDNTEGPHCERCKEGFYR 77
>gi|551597|gb|AAA59483.1| epiligrin alpha 3 subunit [Homo sapiens]
Length = 1713
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 67 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 103
>gi|119621573|gb|EAX01168.1| hCG1811249, isoform CRA_f [Homo sapiens]
Length = 1668
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 78 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 114
>gi|189217428|ref|NP_001121190.1| laminin subunit alpha-3 isoform 4 precursor [Homo sapiens]
gi|34452235|gb|AAQ72569.1| laminin alpha 3 splice variant a [Homo sapiens]
Length = 1668
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 78 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 114
>gi|38045908|ref|NP_000218.2| laminin subunit alpha-3 isoform 2 precursor [Homo sapiens]
gi|167887605|gb|ACA06011.1| laminin alpha-3 chain precursor variant 2 [Homo sapiens]
gi|225000158|gb|AAI72402.1| Laminin, alpha 3 [synthetic construct]
Length = 1724
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 78 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 114
>gi|119621572|gb|EAX01167.1| hCG1811249, isoform CRA_e [Homo sapiens]
Length = 1724
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 78 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 114
>gi|350586016|ref|XP_003482094.1| PREDICTED: laminin subunit alpha-3 isoform 2 [Sus scrofa]
Length = 1669
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNC+ H+ +C+ G+C+ C+H TAG HC CKEGYY
Sbjct: 78 CNCHGHSNRCK-----------DGSGICINCQHNTAGEHCERCKEGYY 114
>gi|334312318|ref|XP_001376890.2| PREDICTED: laminin subunit alpha-5 [Monodelphis domestica]
Length = 3734
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + + GGVC+ C+H T G +C C GYYR P
Sbjct: 368 QSCNCHGHAHDCYYDPEVDRHRASKNQDNIYEGGGVCIDCQHHTTGINCERCIPGYYRSP 427
Query: 86 SRPITHRKAC 95
PI C
Sbjct: 428 DHPIDSPYVC 437
>gi|296478856|tpg|DAA20971.1| TPA: laminin, beta 3 [Bos taurus]
Length = 1172
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S + GGVC CR T GR+C C+ Y+R+ P PI
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGRNCERCQLHYFRNRRPGAPI 372
>gi|125991872|ref|NP_001075065.1| laminin subunit beta-3 precursor [Bos taurus]
gi|124828967|gb|AAI33304.1| Laminin, beta 3 [Bos taurus]
Length = 1172
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S + GGVC CR T GR+C C+ Y+R+ P PI
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGRNCERCQLHYFRNRRPGAPI 372
>gi|242022324|ref|XP_002431590.1| laminin A chain, putative [Pediculus humanus corporis]
gi|212516898|gb|EEB18852.1| laminin A chain, putative [Pediculus humanus corporis]
Length = 3650
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 16 GEHLKKFRCSSRDRIFF-QTCNCNNHARKCRFNMELYK------LSGR-SSGGVCLQCRH 67
G K ++ S + +F + CNC H+ +C ++ E+ K + G+ GGVC CRH
Sbjct: 314 GYQQKAWKQSKANALFVCEQCNCYGHSDECEYSEEVDKQHLSVNIHGQYLGGGVCKNCRH 373
Query: 68 FTAGRHCHYCKEGYYRDPSRPITHRKACKK 97
T G +C+ C+ GYYR RP+ C++
Sbjct: 374 NTEGINCNKCQNGYYRPFGRPLNATNVCER 403
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C CN HA C K++G+ C+ C+H T G HC C GY+
Sbjct: 1767 CQCNGHADTCD------KVTGK-----CIDCKHNTYGDHCESCNVGYH 1803
>gi|432106286|gb|ELK32172.1| Usherin [Myotis davidii]
Length = 5009
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 20 KKFRCSSRDRIF-FQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGRHCH 75
K FR + F + C C+ H+R C +++ R GGVC C H T GR+C
Sbjct: 480 KPFRQGDQTHAFPCKPCQCHGHSRSCHYDISEDPFPSEHHRGGGGVCDDCEHNTTGRNCE 539
Query: 76 YCKEGYYR----DPS 86
CKE ++R DPS
Sbjct: 540 LCKEHFFRPVGADPS 554
>gi|390342743|ref|XP_785198.3| PREDICTED: laminin subunit gamma-1-like [Strongylocentrotus
purpuratus]
Length = 418
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNCN+HA +C F+ ELY +G SGG C++CR+ T+G C +C++ Y+R
Sbjct: 316 CNCNSHADRCFFDEELYNRTG--SGGHCMECRNDTSGVSCEHCRDNYFR 362
>gi|5777581|emb|CAA59325.1| alpha 3B chain of laminin-5 [Homo sapiens]
Length = 1806
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 160 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 196
>gi|119621571|gb|EAX01166.1| hCG1811249, isoform CRA_d [Homo sapiens]
Length = 1785
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 139 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 175
>gi|15620873|dbj|BAB67800.1| KIAA1907 protein [Homo sapiens]
Length = 1737
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 160 QSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP 219
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 220 NHPLDSPHVCRR 231
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR---DPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1667 CQCHGHSDRC--------LPGS---GVCVDCQHNTEGAHCERCQAGFMSSRDDPSAP 1712
>gi|440901389|gb|ELR52343.1| Laminin subunit beta-3 [Bos grunniens mutus]
Length = 1165
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S + GGVC CR T GR+C C+ Y+R+ P PI
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGRNCERCQLHYFRNRRPGAPI 372
>gi|350426806|ref|XP_003494547.1| PREDICTED: laminin subunit gamma-1-like [Bombus impatiens]
Length = 1620
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R +++D + CNCN ++ +C F+ ELYK SG GG CL CR G +C +C+E +Y
Sbjct: 331 RATTKDAHECKPCNCNGYSERCFFDKELYKASGH--GGHCLDCRANRDGANCEHCRENFY 388
Query: 83 RDP 85
+ P
Sbjct: 389 QRP 391
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 12/51 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
CNCNNHA C + G C+ C H TAG +C CK GYY P
Sbjct: 729 CNCNNHADICE-----------AETGQCI-CEHNTAGSNCELCKRGYYGHP 767
>gi|340716935|ref|XP_003396946.1| PREDICTED: laminin subunit gamma-1-like isoform 2 [Bombus
terrestris]
Length = 1620
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R +++D + CNCN ++ +C F+ ELYK SG GG CL CR G +C +C+E +Y
Sbjct: 331 RATTKDAHECKPCNCNGYSERCFFDKELYKASGH--GGHCLDCRANRDGANCEHCRENFY 388
Query: 83 RDP 85
+ P
Sbjct: 389 QRP 391
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 12/51 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
CNCNNHA C + G C+ C H TAG +C CK GYY P
Sbjct: 729 CNCNNHADICE-----------AETGQCI-CEHNTAGSNCELCKRGYYGHP 767
>gi|340716933|ref|XP_003396945.1| PREDICTED: laminin subunit gamma-1-like isoform 1 [Bombus
terrestris]
Length = 1335
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
TCNCN ++ +C F+ ELYK SG GG CL CR G +C +C+E +Y+ P
Sbjct: 57 TCNCNGYSERCFFDKELYKASGH--GGHCLDCRANRDGANCEHCRENFYQRP 106
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 12/51 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
CNCNNHA C + G C+ C H TAG +C CK GYY P
Sbjct: 444 CNCNNHADICE-----------AETGQCI-CEHNTAGSNCELCKRGYYGHP 482
>gi|340716937|ref|XP_003396947.1| PREDICTED: laminin subunit gamma-1-like isoform 3 [Bombus
terrestris]
Length = 1497
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R +++D + CNCN ++ +C F+ ELYK SG GG CL CR G +C +C+E +Y
Sbjct: 223 RATTKDAHECKPCNCNGYSERCFFDKELYKASGH--GGHCLDCRANRDGANCEHCRENFY 280
Query: 83 RDP 85
+ P
Sbjct: 281 QRP 283
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 12/51 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
CNCNNHA C + G C+ C H TAG +C CK GYY P
Sbjct: 621 CNCNNHADICE-----------AETGQCI-CEHNTAGSNCELCKRGYYGHP 659
>gi|260793577|ref|XP_002591788.1| hypothetical protein BRAFLDRAFT_83576 [Branchiostoma floridae]
gi|229276998|gb|EEN47799.1| hypothetical protein BRAFLDRAFT_83576 [Branchiostoma floridae]
Length = 2142
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 20 KKFRCSSRDRIF-FQTCNCNNHARKCRFNMELYK----LSGR---SSGGVCLQCRHFTAG 71
K ++ ++ + +F ++CNC H+ +C ++ E+ + L R + GGVC+ C+H T G
Sbjct: 313 KPWQPATPNNLFECESCNCLGHSTECYYDPEVAQNRLSLDMRGDFNGGGVCINCQHNTEG 372
Query: 72 RHCHYCKEGYYRDPSRPITHRKACKK 97
+C CK G++R P P+T C+
Sbjct: 373 INCERCKPGFFRVPDTPLTSPYVCQS 398
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 12/53 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C C HA C N G C+ C+H T G C C GYY +P R
Sbjct: 1821 CECYGHASSCDEN------------GACIDCQHHTMGERCDKCMTGYYGEPRR 1861
>gi|126307001|ref|XP_001373738.1| PREDICTED: laminin subunit beta-3 [Monodelphis domestica]
Length = 1215
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S SGGVC CR T G++C C+ Y+R+ P PI
Sbjct: 357 QRCDCNGHSETCHFDPAVFAASQGVSGGVCDNCRDHTEGKNCERCQLHYFRNRRPGVPI 415
>gi|380016777|ref|XP_003692349.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1-like [Apis
florea]
Length = 1621
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R +++D + CNCN ++ +C F+ ELYKL+G GG CL CR G +C C+E +Y
Sbjct: 332 RATTKDAHECKPCNCNGYSERCFFDKELYKLTGH--GGHCLDCRANRDGANCERCRENFY 389
Query: 83 RDP 85
+ P
Sbjct: 390 QRP 392
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 12/51 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
CNCNNHA C + G C+ C H TAG +C CK GYY P
Sbjct: 730 CNCNNHADICE-----------AETGQCI-CEHNTAGSNCELCKRGYYGHP 768
>gi|119621570|gb|EAX01165.1| hCG1811249, isoform CRA_c [Homo sapiens]
Length = 1628
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 67 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 103
>gi|313239954|emb|CBY32317.1| unnamed protein product [Oikopleura dioica]
Length = 3305
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 34 TCNCNNHARKCRF--NMELYKLSGRSSG-----GVCLQCRHFTAGRHCHYCKEGYYRDPS 86
CNC+ HA +C + N+E LS + G GVC+ C+H T G +C C+ G+YR+P+
Sbjct: 344 ACNCHQHADRCYYDENVERNGLSVSAEGIYEGGGVCVDCKHHTTGINCERCENGFYRNPA 403
Query: 87 RPITHRKAC 95
I AC
Sbjct: 404 ADIIDVGAC 412
>gi|260802881|ref|XP_002596320.1| hypothetical protein BRAFLDRAFT_225566 [Branchiostoma floridae]
gi|229281575|gb|EEN52332.1| hypothetical protein BRAFLDRAFT_225566 [Branchiostoma floridae]
Length = 466
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 31 FFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT 90
+ C CN H+ +CRF L + VC+ C H T GR+C C+ GYYRD ++ IT
Sbjct: 323 YISACECNTHSDRCRFIQVLGYV-------VCIGCYHNTMGRNCAECRPGYYRDATKEIT 375
Query: 91 HRKACK 96
CK
Sbjct: 376 AHDVCK 381
>gi|426392399|ref|XP_004062540.1| PREDICTED: laminin subunit alpha-5-like, partial [Gorilla gorilla
gorilla]
Length = 2056
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 248 QSCNCYGHATDCYYDPEVDQRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP 307
Query: 86 SRPITHRKACKK 97
+ P+ C++
Sbjct: 308 NHPLDSPHVCRR 319
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 14/58 (24%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY---RDPSRP 88
C C+ H+ +C L G GVC+ C+H T G HC C+ G+ DPS P
Sbjct: 1754 PCQCHGHSDRC--------LPGS---GVCVDCQHNTEGAHCERCQAGFVSSGEDPSTP 1800
>gi|260830543|ref|XP_002610220.1| hypothetical protein BRAFLDRAFT_76999 [Branchiostoma floridae]
gi|229295584|gb|EEN66230.1| hypothetical protein BRAFLDRAFT_76999 [Branchiostoma floridae]
Length = 2571
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 15/85 (17%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMEL-----YKLSGRSSGGVCLQCRHFTA 70
G++L + C + C C HA C +N L LSG GGVC C+H T
Sbjct: 643 GDNLNAYNC--------RPCECYGHADSCHYNASLDPFPNIHLSG--GGGVCDDCQHNTI 692
Query: 71 GRHCHYCKEGYYRDPSRPITHRKAC 95
GR C C + +YR+ +P+ C
Sbjct: 693 GRRCDTCADEFYREIGKPLDAVDVC 717
>gi|27808666|sp|Q61092.2|LAMC2_MOUSE RecName: Full=Laminin subunit gamma-2; AltName: Full=Epiligrin
subunit gamma; AltName: Full=Kalinin subunit gamma;
AltName: Full=Kalinin/nicein/epiligrin 100 kDa subunit;
AltName: Full=Laminin B2t chain; AltName:
Full=Laminin-5 subunit gamma; AltName: Full=Nicein
subunit gamma; Flags: Precursor
gi|18921414|gb|AAA85256.2| laminin gamma 2 chain precursor [Mus musculus]
Length = 1191
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ C+CN +R+C F+ EL++ +G SG CL C TAG HC C+EG+YR
Sbjct: 26 EVCDCNGKSRQCVFDQELHRQTG--SGFRCLNCNDNTAGVHCERCREGFYR 74
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C + TAG +C CK GY+ DP P
Sbjct: 515 QRCQCNNNVDP-NASGNCDQLTGR-----CLKCIYNTAGVYCDQCKAGYFGDPLAP 564
>gi|405973367|gb|EKC38085.1| Laminin subunit alpha-2 [Crassostrea gigas]
Length = 3502
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
CNCNNHA +C N G C+ C+HFT G +C C GYY DP R
Sbjct: 648 CNCNNHAERCDINT-----------GRCINCQHFTTGENCDTCLPGYYGDPRR 689
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
CNC+ H+ C GVC C+H T G C C G+Y D +R
Sbjct: 1402 CNCHRHSDTCD-----------RETGVCQNCQHNTTGSQCQRCLPGFYGDATR 1443
>gi|395856340|ref|XP_003800587.1| PREDICTED: laminin subunit beta-3 [Otolemur garnettii]
Length = 1160
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C CN H+ C F+ ++ S + GGVC CR T GR+C C+ Y+R+ P PI
Sbjct: 314 QRCECNGHSETCHFDPAVFAASQGTHGGVCDNCRDHTEGRNCERCQLHYFRNRRPGAPI 372
>gi|431902413|gb|ELK08913.1| Usherin [Pteropus alecto]
Length = 2952
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H+R C +++ R GGVC C H T GR
Sbjct: 551 GDQVHAFNC--------KPCQCNSHSRSCHYSISEDPFPSEHHRGGGGVCDDCEHNTTGR 602
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 603 NCELCKDYFFRPVGMDPS 620
>gi|119621568|gb|EAX01163.1| hCG1811249, isoform CRA_a [Homo sapiens]
Length = 1339
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 67 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 103
>gi|110624798|ref|NP_032511.3| laminin subunit gamma-2 precursor [Mus musculus]
gi|147898089|gb|AAI40418.1| Laminin, gamma 2 [synthetic construct]
gi|148707497|gb|EDL39444.1| laminin, gamma 2 [Mus musculus]
Length = 1193
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ C+CN +R+C F+ EL++ +G SG CL C TAG HC C+EG+YR
Sbjct: 26 EVCDCNGKSRQCVFDQELHRQTG--SGFRCLNCNDNTAGVHCERCREGFYR 74
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C + TAG +C CK GY+ DP P
Sbjct: 515 QRCQCNNNVDP-NASGNCDQLTGR-----CLKCIYNTAGVYCDQCKAGYFGDPLAP 564
>gi|443709164|gb|ELU03955.1| hypothetical protein CAPTEDRAFT_62597, partial [Capitella teleta]
Length = 564
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++ D Q CNCN+ + +C F+ E+Y +G GG CL CR TAG HC CK+ YY
Sbjct: 50 RATNDDAHECQPCNCNHFSDRCFFDEEMYAQTGH--GGHCLDCRDNTAGPHCERCKDDYY 107
Query: 83 R 83
R
Sbjct: 108 R 108
>gi|119621566|gb|EAX01161.1| hCG2038552, isoform CRA_a [Homo sapiens]
Length = 793
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPDGC 423
>gi|395844378|ref|XP_003794939.1| PREDICTED: laminin subunit gamma-3 isoform 2 [Otolemur garnettii]
Length = 1594
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNC+ + +C F+ EL++ +G GG CL CR TAG HC +C+E +Y
Sbjct: 329 CNCSGRSEECTFDRELFRSTGH--GGRCLHCRDHTAGPHCEHCQENFY 374
>gi|119621569|gb|EAX01164.1| hCG1811249, isoform CRA_b [Homo sapiens]
Length = 1411
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 139 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 175
>gi|449272000|gb|EMC82131.1| Usherin [Columba livia]
Length = 5225
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 33 QTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPI 89
+ C C +HA C +++ + R SGGVC C+H T G++C CK+ +YR +
Sbjct: 572 KPCQCYSHAVSCHYDLAIDPFPQEHYRGSGGVCDNCQHNTTGKNCELCKDFHYRQAGADL 631
Query: 90 THRKACK 96
+ CK
Sbjct: 632 SAIDVCK 638
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP--ITHR 92
CNC+ HA C ME Y+ +C++ +T G +C C Y P RP H
Sbjct: 517 CNCHGHADNCDAAMEPYRC-------LCIK-ESYTEGNNCDRCLPLYNDKPFRPGDQAHA 568
Query: 93 KACK 96
CK
Sbjct: 569 YNCK 572
>gi|1149513|emb|CAA59428.1| alpha3a subunit of laminin 5 [Homo sapiens]
Length = 1238
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 67 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 103
>gi|1149515|emb|CAA59429.1| alpha3b subunit of laminin 5 [Homo sapiens]
Length = 1331
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 160 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 196
>gi|405963229|gb|EKC28820.1| Laminin subunit gamma-1 [Crassostrea gigas]
Length = 1645
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CNN A +C F+ +LY+ +GR GG C+ CR T G HC CK+ +Y P
Sbjct: 360 CECNNKADRCYFDEDLYQTTGR--GGHCIDCRDNTDGPHCERCKDNHYLKP 408
>gi|444519247|gb|ELV12685.1| Laminin subunit gamma-3 [Tupaia chinensis]
Length = 1463
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNC+ + +C F+ EL++ +G GG C CR TAG HC +C+E +YR
Sbjct: 251 CNCSGRSEECSFDRELFRSTGH--GGRCGHCRDHTAGPHCEHCQENFYR 297
>gi|449674332|ref|XP_002165286.2| PREDICTED: laminin subunit gamma-1-like [Hydra magnipapillata]
Length = 1037
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
+ C+CN A +C F+ +L+ S SGG C+ C+ TAG HC CK+ +YR H
Sbjct: 330 KACDCNGLADECVFDEQLWIDSSYQSGGRCINCQKNTAGIHCEKCKDNHYRRDGEIACHP 389
Query: 93 KACKKV 98
C KV
Sbjct: 390 CGCNKV 395
>gi|391346422|ref|XP_003747473.1| PREDICTED: laminin subunit gamma-1-like [Metaseiulus occidentalis]
Length = 1654
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
Q CNCN + C F+ +LY+ + GG C+ CR AG HC CKE YY S
Sbjct: 357 QQCNCNGRSETCVFDPQLYEETNGQIGGRCVNCRDNRAGVHCKECKENYYESNS 410
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 12/51 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CNNH+ C S G C+ C+H TAG +C C+ G+Y +P
Sbjct: 751 CQCNNHSDSCD-----------SETGRCI-CKHNTAGMNCEQCEVGFYGNP 789
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C CN HA++C+ N R G C H T G C CK + P P T + A
Sbjct: 301 CQCNGHAKECKMN-------PRIPGYRDCHCEHNTEGEQCERCKPLFNNRPWAPATAQSA 353
>gi|355562976|gb|EHH19538.1| hypothetical protein EGK_02217, partial [Macaca mulatta]
Length = 1274
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q+CNC+ HA C ++ E+ + S GGVC+ C+H T G +C C G+YR P
Sbjct: 259 QSCNCHGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP 318
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 319 DHPLDSPHVC 328
>gi|395531391|ref|XP_003767762.1| PREDICTED: usherin-like [Sarcophilus harrisii]
Length = 2433
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CNNH++ C +++ + + GGVC C+H T GR
Sbjct: 564 GDQIHAFNC--------KLCQCNNHSKSCHYDVTIDPFPDEYHQGGGGVCENCQHNTTGR 615
Query: 73 HCHYCKEGYYRDPSRPITHRKACK 96
+C CK+ +R + + CK
Sbjct: 616 NCEMCKDYLFRQVGADPSAKDICK 639
>gi|426363343|ref|XP_004048800.1| PREDICTED: laminin subunit gamma-3 [Gorilla gorilla gorilla]
Length = 1575
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ +++C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 327 CNCSGRSKECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 379
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAP 857
>gi|395855486|ref|XP_003800190.1| PREDICTED: usherin [Otolemur garnettii]
Length = 5202
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H+R C +++ + R GGVC C H T GR
Sbjct: 564 GDQVHAFNC--------KPCRCNSHSRICHYDILVDPFPFEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVGADPS 633
>gi|291222160|ref|XP_002731086.1| PREDICTED: laminin B2-like [Saccoglossus kowalevskii]
Length = 1629
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
Q C+CN + +C FN +L++ +G GG C++CR TAG +C C++ YYR
Sbjct: 351 QACDCNGLSNRCYFNEDLFERTGH--GGYCVECRLNTAGPNCERCRDDYYR 399
>gi|256078062|ref|XP_002575317.1| laminin [Schistosoma mansoni]
Length = 3040
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 33 QTCNCNNHARKCRFNMEL--YKLSGR-----SSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ CNCN A +C +N + +LS R GGVCL CR T G +C CK+GYYR
Sbjct: 337 EECNCNQKADECIYNQTVANLRLSMRKDGVLEGGGVCLNCREDTTGVNCEKCKQGYYR 394
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 13/62 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C C+ H+ C GVC+ C H TAG C C G+Y DP KA
Sbjct: 819 CECHGHSDICD-----------EKTGVCIDCAHNTAGDKCDICAPGFYGDPR--TGDPKA 865
Query: 95 CK 96
CK
Sbjct: 866 CK 867
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 61 VCLQCRHFTAGRHCHYCKEGYYRDP 85
VCL C T GR+C C E YY DP
Sbjct: 897 VCLDCTENTRGRYCEVCAEMYYGDP 921
>gi|345306108|ref|XP_003428422.1| PREDICTED: laminin subunit gamma-3 [Ornithorhynchus anatinus]
Length = 1328
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C ++ EL++ +G GG C CR TAG HC C+E +YR DP +P
Sbjct: 329 CNCSGHSEECFYDRELFRSTGH--GGHCRNCRAHTAGPHCERCQENFYRWDPQKP 381
>gi|344277073|ref|XP_003410329.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-3-like
[Loxodonta africana]
Length = 1171
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPIT 90
Q C+CN H+ C F+ ++ S + GGVC +CR T G++C C+ Y+R+ P P+
Sbjct: 314 QRCDCNGHSETCHFDSAVFAASQGAHGGVCDKCRDHTEGKNCERCQLHYFRNRRPGAPV- 372
Query: 91 HRKAC 95
++AC
Sbjct: 373 -QEAC 376
>gi|322798888|gb|EFZ20399.1| hypothetical protein SINV_07587 [Solenopsis invicta]
Length = 1523
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++ D + CNCN ++ +C F+ ELYK SG GG CL CR G +C C+E YY
Sbjct: 234 RATTTDAHECKPCNCNGYSDRCYFDKELYKTSGH--GGHCLDCRANRDGANCERCRENYY 291
Query: 83 RDP 85
+ P
Sbjct: 292 QRP 294
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 12/51 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
CNCN HA C + G C+ C+H TAG +C C GYY P
Sbjct: 632 CNCNGHADICE-----------AETGQCI-CQHNTAGSNCELCSRGYYGYP 670
>gi|410986166|ref|XP_003999383.1| PREDICTED: laminin subunit beta-3 isoform 1 [Felis catus]
gi|410986168|ref|XP_003999384.1| PREDICTED: laminin subunit beta-3 isoform 2 [Felis catus]
Length = 1172
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ P PI
Sbjct: 314 QPCDCNGHSETCHFDPAVFAASQGAHGGVCDDCRDHTEGKNCERCQLHYFRNRRPGAPI 372
>gi|297270034|ref|XP_001118580.2| PREDICTED: laminin subunit gamma-3 [Macaca mulatta]
Length = 874
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 327 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 379
>gi|359319942|ref|XP_547393.4| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-3 [Canis lupus
familiaris]
Length = 1205
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ P PI
Sbjct: 347 QRCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPI 405
>gi|260797158|ref|XP_002593571.1| hypothetical protein BRAFLDRAFT_88482 [Branchiostoma floridae]
gi|229278796|gb|EEN49582.1| hypothetical protein BRAFLDRAFT_88482 [Branchiostoma floridae]
Length = 1323
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMEL----YKLSGRSS---GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q CNCNNH++ C +N + +S S GGVCL CR T G +C C +YR+P
Sbjct: 791 QACNCNNHSQVCVYNETVAAGNLSMSANGSFHGGGVCLSCRDNTTGTNCEQCDTLFYRNP 850
Query: 86 SRPITHRKAC 95
AC
Sbjct: 851 EVSHQSSSAC 860
>gi|440908230|gb|ELR58274.1| Laminin subunit gamma-2, partial [Bos grunniens mutus]
Length = 1165
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
C+CN +R+C F+ EL++L+G +G CL C T G HC CKEG+YR
Sbjct: 1 VCDCNGKSRQCIFDQELHRLTG--NGFRCLHCSDNTGGIHCERCKEGFYR 48
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC CK GYY DP P
Sbjct: 510 GRCLKCLHNTTGAHCDQCKAGYYGDPLAP 538
>gi|354472786|ref|XP_003498618.1| PREDICTED: laminin subunit beta-3 [Cricetulus griseus]
Length = 1171
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ P PI
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGTHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPI 372
>gi|344246519|gb|EGW02623.1| Laminin subunit beta-3 [Cricetulus griseus]
Length = 1166
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ P PI
Sbjct: 309 QRCDCNGHSETCHFDPAVFAASQGTHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPI 367
>gi|326667876|ref|XP_687343.4| PREDICTED: laminin subunit gamma-3 [Danio rerio]
Length = 1634
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNC+ A +C F++E Y+ +G+ GG CL CR TAG HC C+E Y+R
Sbjct: 326 CNCSGLADECVFDVEQYRSTGQ--GGRCLGCRENTAGPHCEQCRENYFR 372
>gi|119908663|ref|XP_588297.3| PREDICTED: laminin subunit gamma-2 [Bos taurus]
gi|297484377|ref|XP_002694254.1| PREDICTED: laminin subunit gamma-2 [Bos taurus]
gi|296478939|tpg|DAA21054.1| TPA: laminin, gamma 2-like [Bos taurus]
Length = 1191
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
C+CN +R+C F+ EL++L+G +G CL C T G HC CKEG+YR
Sbjct: 27 VCDCNGKSRQCIFDQELHRLTG--NGFRCLHCSDNTGGIHCERCKEGFYR 74
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC CK GYY DP P
Sbjct: 536 GRCLKCLHNTTGAHCDQCKAGYYGDPLAP 564
>gi|281371337|ref|NP_001094311.1| laminin, beta 3 precursor [Rattus norvegicus]
gi|149041078|gb|EDL95035.1| laminin, beta 3, isoform CRA_a [Rattus norvegicus]
gi|149041079|gb|EDL95036.1| laminin, beta 3, isoform CRA_a [Rattus norvegicus]
Length = 1172
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S +SGGVC C+ T G++C C+ Y+R+ P PI
Sbjct: 315 QRCDCNGHSETCHFDPAVFAASQGTSGGVCDNCQDHTEGKNCERCQLHYFRNRRPGAPI 373
>gi|301773354|ref|XP_002922092.1| PREDICTED: laminin subunit beta-3-like [Ailuropoda melanoleuca]
Length = 1197
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
Q C+CN H+ C F+ ++ S ++GGVC CR T G++C C+ Y+R+
Sbjct: 339 QRCDCNGHSESCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRN 390
>gi|395511615|ref|XP_003760052.1| PREDICTED: laminin subunit alpha-3 [Sarcophilus harrisii]
Length = 3127
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 15 GGEHLKKFRCSSRDRIFF-QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCR 66
G + K++R ++ +R + CNC+ HA C ++ ++ + S GGVC+ C+
Sbjct: 331 AGYNQKQWRPATAERTNECEVCNCHGHATDCYYDPDVERQSESLNIHGVYEGGGVCINCQ 390
Query: 67 HFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
H TAG +C C +GYYR + P+ C
Sbjct: 391 HNTAGVNCEKCIQGYYRPYNVPVEAPHGC 419
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
CNCN H+ +C+ G+C+ C+H TAG +C CKEGYY D
Sbjct: 1666 CNCNGHSNRCQ-----------DGSGICINCQHNTAGANCERCKEGYYGD 1704
>gi|338724761|ref|XP_001915830.2| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-3-like [Equus
caballus]
Length = 1172
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ P PI
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPI 372
>gi|432097300|gb|ELK27631.1| Laminin subunit beta-3 [Myotis davidii]
Length = 1173
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ P PI
Sbjct: 314 QRCDCNGHSETCHFDPAVFTSSQGAQGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPI 372
>gi|355698933|gb|AES00963.1| laminin, beta 3 [Mustela putorius furo]
Length = 956
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ P PI
Sbjct: 99 QRCDCNGHSETCHFDPAVFAASQGTHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPI 157
>gi|313224219|emb|CBY32304.1| unnamed protein product [Oikopleura dioica]
Length = 2301
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 34 TCNCNNHARKCRF--NMELYKLSGRSSG-----GVCLQCRHFTAGRHCHYCKEGYYRDPS 86
CNC+ HA +C + N+E LS + G GVC+ C+H T G +C C+ G+YR+P+
Sbjct: 344 ACNCHQHADRCYYDENVERNGLSVSAEGIYEGGGVCVDCKHHTTGINCERCENGFYRNPA 403
Query: 87 RPITHRKAC 95
I AC
Sbjct: 404 ADIIDVGAC 412
>gi|426385629|ref|XP_004059307.1| PREDICTED: laminin subunit alpha-3-like, partial [Gorilla gorilla
gorilla]
Length = 696
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 99 QACNCHGHASDCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 158
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 159 GVPVDAPDGC 168
>gi|332247811|ref|XP_003273054.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-3 [Nomascus
leucogenys]
Length = 1170
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ ++ +
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGVSIQ 373
Query: 93 KAC 95
+ C
Sbjct: 374 ETC 376
>gi|1151215|gb|AAA85255.1| laminin beta3 chain [Mus musculus]
Length = 1168
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY--RDPSRPI 89
Q C+CN H+ C F+ ++ S ++GGVC CR T G++C C+ Y+ R PS PI
Sbjct: 311 QRCDCNGHSLTCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCEPCQLHYFWNRRPSAPI 369
>gi|2143489|pir||I56985 kalinin B1 - mouse
Length = 1168
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY--RDPSRPI 89
Q C+CN H+ C F+ ++ S ++GGVC CR T G++C C+ Y+ R PS PI
Sbjct: 311 QRCDCNGHSLTCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCEPCQLHYFWNRRPSAPI 369
>gi|327269871|ref|XP_003219716.1| PREDICTED: laminin subunit alpha-3-like [Anolis carolinensis]
Length = 3173
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ E+ + GGVC+ C+H TAG +C C +GYYR
Sbjct: 360 EPCNCHGHATDCYYDPEIEQRKASLNIYGEYQGGGVCIDCQHNTAGVNCERCVKGYYRPY 419
Query: 86 SRPITHRKAC 95
P+T C
Sbjct: 420 GVPVTAAHGC 429
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 13/64 (20%)
Query: 26 SRDRIFFQ--TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+RDR+ + CNCN ++ +C L G G+CL C+H TAG +C YC+EGY+
Sbjct: 1667 NRDRLTGRCIPCNCNGNSDRC--------LDG---SGICLNCQHNTAGDNCEYCREGYFG 1715
Query: 84 DPSR 87
D S+
Sbjct: 1716 DASQ 1719
>gi|307203704|gb|EFN82670.1| Laminin subunit gamma-1 [Harpegnathos saltator]
Length = 1646
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++ D + CNCN ++ +C F+ ELYKL+G GG CL C+ G +C C+E YY
Sbjct: 329 RATTTDAHECKPCNCNGYSDRCYFDKELYKLAGH--GGHCLDCQANRDGANCERCRENYY 386
Query: 83 RDP 85
+ P
Sbjct: 387 QRP 389
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 12/54 (22%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+CNCN HA C + G C+ C H TAG +C C G+Y P R
Sbjct: 726 SCNCNGHADICE-----------AETGQCI-CHHNTAGDNCELCARGFYGHPLR 767
>gi|426385603|ref|XP_004059294.1| PREDICTED: laminin subunit alpha-3 isoform 2 [Gorilla gorilla
gorilla]
Length = 1668
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H T G HC C+EGYY
Sbjct: 78 CNCNGHSNRCQ-----------DGSGICVNCQHNTEGEHCERCQEGYY 114
>gi|426385601|ref|XP_004059293.1| PREDICTED: laminin subunit alpha-3 isoform 1 [Gorilla gorilla
gorilla]
Length = 1724
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H T G HC C+EGYY
Sbjct: 78 CNCNGHSNRCQ-----------DGSGICVNCQHNTEGEHCERCQEGYY 114
>gi|348570392|ref|XP_003470981.1| PREDICTED: laminin subunit gamma-3-like [Cavia porcellus]
Length = 1786
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
CNC+ + C F++EL++ +G GG C CR TAG HC C+E +YR +R
Sbjct: 531 CNCSGRSENCTFDLELFRSTGH--GGHCHGCRDHTAGPHCERCEENFYRWDAR 581
>gi|327262517|ref|XP_003216070.1| PREDICTED: LOW QUALITY PROTEIN: Usherin-like [Anolis carolinensis]
Length = 5205
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + + C + C C HA C +N + R GGVC C+H T GR
Sbjct: 565 GDQVHAYNC--------KPCQCYGHATSCHYNRTMDSFPNEHYRGGGGVCDDCQHNTTGR 616
Query: 73 HCHYCKEGYYRDPSRPITHRKACK 96
+C CK+ ++R ++ CK
Sbjct: 617 NCELCKDFFFRHIDADLSAVDVCK 640
>gi|403277629|ref|XP_003930456.1| PREDICTED: laminin subunit beta-3 [Saimiri boliviensis boliviensis]
Length = 1172
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ + +
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQ 373
Query: 93 KAC 95
+AC
Sbjct: 374 EAC 376
>gi|281352353|gb|EFB27937.1| hypothetical protein PANDA_011037 [Ailuropoda melanoleuca]
Length = 1161
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C+CN H+ C F+ ++ S ++GGVC CR T G++C C+ Y+R+ + +
Sbjct: 303 QRCDCNGHSESCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQ 362
Query: 93 KAC 95
+ C
Sbjct: 363 ETC 365
>gi|339237515|ref|XP_003380312.1| putative laminin [Trichinella spiralis]
gi|316976875|gb|EFV60072.1| putative laminin [Trichinella spiralis]
Length = 1253
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
Q C+CN + +C F+ ELY+++G +GG C+ C T G HC C E Y+R P +
Sbjct: 366 QACDCNGLSNRCYFDEELYRMTG--NGGHCINCAGNTRGAHCEACLENYWRAPGQ 418
>gi|119608361|gb|EAW87955.1| laminin, gamma 3, isoform CRA_b [Homo sapiens]
Length = 1588
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 327 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 379
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAP 857
>gi|410977472|ref|XP_003995129.1| PREDICTED: laminin subunit alpha-3 [Felis catus]
Length = 3215
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + G + GGVC+ C+H TAG +C C +GYYR
Sbjct: 259 EACNCHGHAIDCYYDPDVERQRGSLNIQGIYAGGGVCINCQHNTAGVNCEICAKGYYRPY 318
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 319 GVPVDAPHGC 328
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC CKEG+Y
Sbjct: 1594 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCKEGHY 1630
>gi|5001398|gb|AAD36991.1|AF041835_1 laminin gamma 3 chain precursor [Homo sapiens]
Length = 1587
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 327 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 379
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAP 857
>gi|410043323|ref|XP_003951603.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-3-like [Pan
troglodytes]
Length = 1577
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 327 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 379
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 831 GHCLRCLHNTTGDHCEHCQEGFYGSALAP 859
>gi|110611156|ref|NP_006050.3| laminin subunit gamma-3 precursor [Homo sapiens]
gi|308153586|sp|Q9Y6N6.3|LAMC3_HUMAN RecName: Full=Laminin subunit gamma-3; AltName: Full=Laminin-12
subunit gamma; AltName: Full=Laminin-14 subunit gamma;
AltName: Full=Laminin-15 subunit gamma; Flags: Precursor
gi|162317634|gb|AAI56275.1| Laminin, gamma 3 [synthetic construct]
Length = 1575
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 327 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 379
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAP 857
>gi|281371494|ref|NP_001094110.1| laminin, gamma 2 precursor [Rattus norvegicus]
Length = 1192
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C+CN +R+C F+ EL++ +G +G CL C TAG HC C+EG+YR R
Sbjct: 26 EVCDCNGKSRQCVFDQELHRQTG--NGFRCLNCNDNTAGVHCERCREGFYRQRDR 78
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C + TAG +C CK GY+ DP P
Sbjct: 515 QRCQCNNNVDP-SASGNCDQLTGR-----CLKCIYNTAGIYCDQCKAGYFGDPLAP 564
>gi|119608362|gb|EAW87956.1| laminin, gamma 3, isoform CRA_c [Homo sapiens]
Length = 1575
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 327 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 379
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAP 857
>gi|119608363|gb|EAW87957.1| laminin, gamma 3, isoform CRA_d [Homo sapiens]
Length = 1587
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 327 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 379
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAP 857
>gi|397503642|ref|XP_003822428.1| PREDICTED: laminin subunit gamma-3 isoform 1 [Pan paniscus]
Length = 1554
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 306 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 358
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 808 GHCLRCLHNTTGDHCEHCQEGFYGSALAP 836
>gi|47210194|emb|CAF90022.1| unnamed protein product [Tetraodon nigroviridis]
Length = 520
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CN+H+ +C + + ++ C+ C+H T G+ C YC+ G+YR+ S P+
Sbjct: 353 QNCECNDHSSRCSYIDFINVVT-------CVSCKHNTRGQRCQYCRLGFYRNASLPLNDE 405
Query: 93 KAC 95
C
Sbjct: 406 NVC 408
>gi|397503644|ref|XP_003822429.1| PREDICTED: laminin subunit gamma-3 isoform 2 [Pan paniscus]
Length = 1568
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 306 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 358
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 808 GHCLRCLHNTTGDHCEHCQEGFYGSALAP 836
>gi|62087354|dbj|BAD92124.1| laminin, gamma 3 precursor variant [Homo sapiens]
Length = 1379
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 131 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 183
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 633 GHCLRCLHNTTGDHCEHCQEGFYGSALAP 661
>gi|427796483|gb|JAA63693.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 1583
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R +S D Q CNCN +RKC F+ EL++ +G GG C+ C T G +C C+E YY
Sbjct: 296 RATSTDAHECQPCNCNGRSRKCYFDQELFERTGH--GGHCVNCSDNTDGPNCERCRENYY 353
Query: 83 RD 84
++
Sbjct: 354 QN 355
>gi|444707767|gb|ELW48958.1| Laminin subunit alpha-3 [Tupaia chinensis]
Length = 3073
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 298 EACNCHGHATDCYYDPDIEQQQASLNSQGVYAGGGVCINCQHNTAGVNCEKCAKGYYRPS 357
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 358 GVPVDAPHGC 367
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 16/25 (64%)
Query: 58 SGGVCLQCRHFTAGRHCHYCKEGYY 82
SG C C H TAG HC CKEGYY
Sbjct: 1494 SGDSCQNCAHNTAGEHCERCKEGYY 1518
>gi|355558956|gb|EHH15736.1| hypothetical protein EGK_01866 [Macaca mulatta]
Length = 1193
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ ELY+ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDQELYRQTG--NGFRCLNCNDNTDGIHCERCK 69
Query: 79 EGYYR 83
+G+YR
Sbjct: 70 DGFYR 74
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAPNPAE 568
Query: 93 K 93
K
Sbjct: 569 K 569
>gi|119608360|gb|EAW87954.1| laminin, gamma 3, isoform CRA_a [Homo sapiens]
Length = 1547
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 327 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 379
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C H T G HC +C+EG+Y P
Sbjct: 829 GHCLRCLHNTTGDHCEHCQEGFYGSALAP 857
>gi|355746106|gb|EHH50731.1| hypothetical protein EGM_01601 [Macaca fascicularis]
Length = 1193
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ ELY+ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDQELYRQTG--NGFRCLNCNDNTDGIHCERCK 69
Query: 79 EGYYR 83
+G+YR
Sbjct: 70 DGFYR 74
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAPNPAE 568
Query: 93 K 93
K
Sbjct: 569 K 569
>gi|383858273|ref|XP_003704626.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1-like
[Megachile rotundata]
Length = 1652
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++ D + CNCN ++ +C F+ ELYK +G GG CL CR G +C C+E YY
Sbjct: 334 RATTTDAHECKPCNCNGYSDRCYFDKELYKATGH--GGHCLDCRANRDGANCERCRENYY 391
Query: 83 RDP 85
+ P
Sbjct: 392 QRP 394
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 12/51 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
CNCN HA C + G C+ C+H TAG +C CK GYY P
Sbjct: 732 CNCNGHADICE-----------AETGQCI-CQHNTAGSNCELCKRGYYGHP 770
>gi|402857875|ref|XP_003893463.1| PREDICTED: laminin subunit gamma-2 [Papio anubis]
Length = 1193
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ ELY+ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDQELYRQTG--NGFRCLNCNDNTDGIHCERCK 69
Query: 79 EGYYR 83
+G+YR
Sbjct: 70 DGFYR 74
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CNN+ +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDPSSSG-NCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAPNPAE 568
Query: 93 K 93
K
Sbjct: 569 K 569
>gi|109019107|ref|XP_001114169.1| PREDICTED: laminin subunit gamma-2 isoform 2 [Macaca mulatta]
Length = 1193
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ ELY+ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDQELYRQTG--NGFRCLNCNDNTDGIHCERCK 69
Query: 79 EGYYR 83
+G+YR
Sbjct: 70 DGFYR 74
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAPNPAE 568
Query: 93 K 93
K
Sbjct: 569 K 569
>gi|384947000|gb|AFI37105.1| laminin subunit beta-3 precursor [Macaca mulatta]
Length = 1172
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 27 RDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
RD Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+
Sbjct: 308 RDTHECQRCDCNGHSETCHFDSAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRN 365
>gi|163716977|gb|ABY40628.1| alpha 3,4,5-laminin [Ciona savignyi]
Length = 3777
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 33 QTCNCNNHARKCRFNMELYK------LSGR-SSGGVCLQCRHFTAGRHCHYCKEGYYR-- 83
+ CNC+ H +C ++ ++ + L+G GGVCL C+H TAG +C C GY+R
Sbjct: 335 EACNCHGHTTECEYDEDVARRRLSLDLAGNYEGGGVCLNCQHHTAGINCEQCASGYWRPS 394
Query: 84 --DPSRP 88
DP P
Sbjct: 395 NVDPRDP 401
>gi|395824897|ref|XP_003785687.1| PREDICTED: laminin subunit gamma-2 [Otolemur garnettii]
Length = 1191
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ C+CN +R C F+ EL++ +GR G CL C+ T G HC CKEG+YR
Sbjct: 26 EECDCNGKSRTCVFDFELHRQTGR--GLRCLNCQDNTEGFHCERCKEGFYR 74
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGAYCDQCKAGYFGDPLAP 564
>gi|351697300|gb|EHB00219.1| Laminin subunit gamma-3, partial [Heterocephalus glaber]
Length = 1530
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY----RDPSRP 88
C+C+ ++ C F++EL++ +GR GG C C TAG HC C+E +Y R P RP
Sbjct: 269 CSCSGRSKDCTFDLELFRSTGR--GGRCHHCLDHTAGPHCERCEENFYRWDQRAPCRP 324
>gi|326433679|gb|EGD79249.1| hypothetical protein PTSG_12970 [Salpingoeca sp. ATCC 50818]
Length = 10593
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS---GGVCLQCRHFTAGRHCHYCKEGYYRDPSRPI 89
Q C CN HA C FN L SG S+ GG C+ C T G C C + YY + I
Sbjct: 599 QPCECNGHANACMFNATLAGQSGTSNLSGGGQCVDCGANTTGPKCGQCADAYYLPSNVAI 658
Query: 90 THRKACK 96
C+
Sbjct: 659 NSTDPCE 665
>gi|348578077|ref|XP_003474810.1| PREDICTED: laminin subunit beta-3-like [Cavia porcellus]
Length = 1174
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ P P+
Sbjct: 315 QRCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPL 373
>gi|324499439|gb|ADY39758.1| Basement membrane proteoglycan [Ascaris suum]
Length = 5179
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
CNCNNH+ + G S G CL C H T G HC CK+G+Y D +R
Sbjct: 1141 CNCNNHSPR-----------GCDSFGRCLMCEHNTEGYHCEQCKKGFYGDATR 1182
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 11/59 (18%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
+ C C+ HA +C G C+ C+H T G C CK G+ D R H
Sbjct: 1083 ERCECHGHATQCD-----------KEHGFCVDCQHNTEGDQCERCKPGFVGDARRGTPH 1130
>gi|410986497|ref|XP_003999546.1| PREDICTED: usherin [Felis catus]
Length = 1595
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGR 72
G+ + F C + C CNNH+R C +N+ + R GGVC C H T GR
Sbjct: 564 GDQVHAFNC--------KPCQCNNHSRSCHYNISVDPFPFEHHRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYRDPSRPITHRKACKK 97
+C CK+ ++R + CK
Sbjct: 616 NCELCKDYFFRQVGADTSAVDVCKP 640
>gi|297282019|ref|XP_002802197.1| PREDICTED: laminin subunit beta-3-like [Macaca mulatta]
Length = 1174
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 27 RDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
RD Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+
Sbjct: 308 RDTHECQRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRR 367
Query: 87 RPITHRKAC 95
+ ++ C
Sbjct: 368 PGASIQETC 376
>gi|215276948|ref|NP_001135830.1| laminin subunit gamma-2 precursor [Ovis aries]
gi|213032419|emb|CAS03528.1| laminin 5 gamma 2 subunit [Ovis aries]
Length = 1191
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
C+CN +R+C F+ EL++L+G +G CL C T G HC C+EG+YR
Sbjct: 27 VCDCNGKSRQCIFDQELHRLTG--NGFRCLHCSDNTGGIHCERCREGFYR 74
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C C+N+ +L+GR CL+C + T G HC CK GYY DP P
Sbjct: 515 QPCQCSNNVDP-NAPGNCDRLTGR-----CLKCLYNTTGAHCDQCKAGYYGDPLAP 564
>gi|355745955|gb|EHH50580.1| hypothetical protein EGM_01434 [Macaca fascicularis]
Length = 1172
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 27 RDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
RD Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+
Sbjct: 308 RDTHECQRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRR 367
Query: 87 RPITHRKAC 95
+ ++ C
Sbjct: 368 PGASIQETC 376
>gi|324499467|gb|ADY39772.1| Basement membrane proteoglycan [Ascaris suum]
Length = 3475
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
CNCNNH+ + G S G CL C H T G HC CK+G+Y D +R
Sbjct: 890 CNCNNHSPR-----------GCDSFGRCLMCEHNTEGYHCEQCKKGFYGDATR 931
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 11/59 (18%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
+ C C+ HA +C G C+ C+H T G C CK G+ D R H
Sbjct: 832 ERCECHGHATQCD-----------KEHGFCVDCQHNTEGDQCERCKPGFVGDARRGTPH 879
>gi|46020022|dbj|BAD13428.1| laminin alpha 3b chain [Homo sapiens]
Length = 3333
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPDGC 423
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 1687 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 1723
>gi|167887604|gb|ACA06010.1| laminin alpha-3 chain precursor variant 1 [Homo sapiens]
Length = 3335
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPDGC 423
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 1689 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 1725
>gi|38045910|ref|NP_937762.1| laminin subunit alpha-3 isoform 1 precursor [Homo sapiens]
gi|215274012|sp|Q16787.2|LAMA3_HUMAN RecName: Full=Laminin subunit alpha-3; AltName: Full=Epiligrin 170
kDa subunit; Short=E170; AltName: Full=Epiligrin subunit
alpha; AltName: Full=Kalinin subunit alpha; AltName:
Full=Laminin-5 subunit alpha; AltName: Full=Laminin-6
subunit alpha; AltName: Full=Laminin-7 subunit alpha;
AltName: Full=Nicein subunit alpha; Flags: Precursor
gi|34452237|gb|AAQ72570.1| laminin alpha 3 splice variant b1 [Homo sapiens]
gi|225000930|gb|AAI72580.1| Laminin, alpha 3 [synthetic construct]
Length = 3333
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPDGC 423
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 1687 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 1723
>gi|189217425|ref|NP_001121189.1| laminin subunit alpha-3 isoform 3 precursor [Homo sapiens]
gi|34452239|gb|AAQ72571.1| laminin alpha 3 splice variant b2 [Homo sapiens]
Length = 3277
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPDGC 423
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 1687 CNCNGHSNQCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 1723
>gi|354481444|ref|XP_003502911.1| PREDICTED: laminin subunit gamma-2 [Cricetulus griseus]
Length = 1253
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
C+CN +R+C F+ EL++ +G +G CL C TAG HC C+EG+YR
Sbjct: 88 VCDCNGKSRQCIFDQELHRQTG--NGFRCLNCNDNTAGAHCERCREGFYR 135
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C + TAG +C CK GY+ DP P
Sbjct: 576 QRCQCNNNVDP-SASGNCDRLTGR-----CLKCIYNTAGIYCDQCKAGYFGDPLAP 625
>gi|426333625|ref|XP_004028373.1| PREDICTED: laminin subunit beta-3 isoform 1 [Gorilla gorilla
gorilla]
gi|426333627|ref|XP_004028374.1| PREDICTED: laminin subunit beta-3 isoform 2 [Gorilla gorilla
gorilla]
Length = 1171
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ + +
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPEASIQ 373
Query: 93 KAC 95
+ C
Sbjct: 374 ETC 376
>gi|297702386|ref|XP_002828160.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-3 [Pongo
abelii]
Length = 3339
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 360 EACNCHGHASDCYYDPDVERQQASLTTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 419
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 420 GVPVDAPDGC 429
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 1693 CNCNGHSNRCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 1729
>gi|297281294|ref|XP_002802072.1| PREDICTED: laminin subunit gamma-2 [Macaca mulatta]
Length = 1010
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ ELY+ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDQELYRQTG--NGFRCLNCNDNTDGIHCERCK 69
Query: 79 EGYYR 83
+G+YR
Sbjct: 70 DGFYR 74
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAPNPAE 568
Query: 93 K 93
K
Sbjct: 569 K 569
>gi|402857314|ref|XP_003893209.1| PREDICTED: laminin subunit beta-3 isoform 1 [Papio anubis]
gi|402857316|ref|XP_003893210.1| PREDICTED: laminin subunit beta-3 isoform 2 [Papio anubis]
Length = 1172
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 27 RDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
RD Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+
Sbjct: 308 RDTHECQRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRN 365
>gi|355558808|gb|EHH15588.1| hypothetical protein EGK_01700 [Macaca mulatta]
Length = 1172
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 27 RDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
RD Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+
Sbjct: 308 RDTHECQRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRN 365
>gi|332849571|ref|XP_001156417.2| PREDICTED: laminin subunit alpha-3 isoform 5 [Pan troglodytes]
gi|410332185|gb|JAA35039.1| laminin, alpha 3 [Pan troglodytes]
Length = 3333
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHASDCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPDGC 423
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC +C+EGYY
Sbjct: 1687 CNCNGHSNRCQ-----------DGSGICVNCQHNTAGEHCEHCQEGYY 1723
>gi|395530960|ref|XP_003767552.1| PREDICTED: laminin subunit gamma-2 [Sarcophilus harrisii]
Length = 1204
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 30 IFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ C+CN +R+C F+ EL + +G+ G CL C TAG HC CK+G+YR
Sbjct: 37 VMGPVCDCNGKSRQCVFDQELQRRTGK--GFRCLNCNDNTAGVHCERCKDGFYR 88
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDP--SRPITHRKAC 95
G CL+C + TAG HC CKEGY+ +P + P +AC
Sbjct: 549 GECLKCIYNTAGFHCDQCKEGYFGNPLATNPADKCRAC 586
>gi|397520458|ref|XP_003830334.1| PREDICTED: laminin subunit alpha-3 isoform 1 [Pan paniscus]
Length = 3333
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHASDCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPDGC 423
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC +C+EGYY
Sbjct: 1687 CNCNGHSNRCQ-----------DGSGICVNCQHNTAGEHCEHCQEGYY 1723
>gi|345480466|ref|XP_003424155.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-2-like
[Nasonia vitripennis]
Length = 3201
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNCN HA CR++ ++ ++ GGVCL C +T G +C C+ GYYR
Sbjct: 293 EKCNCNGHATACRYDHQVAEMKLSMDIRGKYRGGGVCLNCSDYTTGINCEKCEAGYYRPN 352
Query: 86 SRPITHRKAC 95
P + C
Sbjct: 353 GIPPDDPEPC 362
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 14/65 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT---H 91
C+CN HA C M G C C H T G C C GY+ D +R H
Sbjct: 719 CDCNGHAGSCDLMM-----------GECSTCEHHTIGPKCDRCTVGYFGDATRGTPEDCH 767
Query: 92 RKACK 96
R AC
Sbjct: 768 RCACP 772
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPS 86
G CL CR TAG C C E YY DP+
Sbjct: 1511 GHCLDCRDNTAGVFCELCAESYYGDPN 1537
>gi|332849575|ref|XP_001156295.2| PREDICTED: laminin subunit alpha-3 isoform 4 [Pan troglodytes]
Length = 3277
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHASDCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPDGC 423
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC +C+EGYY
Sbjct: 1687 CNCNGHSNRCQ-----------DGSGICVNCQHNTAGEHCEHCQEGYY 1723
>gi|148676571|gb|EDL08518.1| laminin gamma 3, isoform CRA_a [Mus musculus]
Length = 1592
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ ELY+ +G GG C +CR T G HC C++ YYR P P
Sbjct: 336 CNCSGHSEECTFDRELYRSTGH--GGHCQRCRDHTTGPHCERCEKNYYRWSPKTP 388
>gi|402902824|ref|XP_003914292.1| PREDICTED: laminin subunit alpha-3 [Papio anubis]
Length = 3344
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHASDCYYDSDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPDGC 423
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 1698 CNCNGHSNRCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 1734
>gi|6453719|gb|AAF08983.1|AF083372_1 laminin 12 gamma 3 chain [Mus musculus]
Length = 1581
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ ELY+ +G GG C +CR T G HC C++ YYR P P
Sbjct: 336 CNCSGHSEECTFDRELYRSTGH--GGHCQRCRDHTTGPHCERCEKNYYRWSPKTP 388
>gi|66392579|ref|NP_035966.2| laminin subunit gamma-3 precursor [Mus musculus]
gi|341940892|sp|Q9R0B6.2|LAMC3_MOUSE RecName: Full=Laminin subunit gamma-3; AltName: Full=Laminin-12
subunit gamma; AltName: Full=Laminin-14 subunit gamma;
AltName: Full=Laminin-15 subunit gamma; Flags: Precursor
gi|66272331|gb|AAH96366.1| Laminin gamma 3 [Mus musculus]
gi|148676572|gb|EDL08519.1| laminin gamma 3, isoform CRA_b [Mus musculus]
Length = 1581
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ ELY+ +G GG C +CR T G HC C++ YYR P P
Sbjct: 336 CNCSGHSEECTFDRELYRSTGH--GGHCQRCRDHTTGPHCERCEKNYYRWSPKTP 388
>gi|397520460|ref|XP_003830335.1| PREDICTED: laminin subunit alpha-3 isoform 2 [Pan paniscus]
Length = 3277
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHASDCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPDGC 423
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC +C+EGYY
Sbjct: 1687 CNCNGHSNRCQ-----------DGSGICVNCQHNTAGEHCEHCQEGYY 1723
>gi|4808543|gb|AAD29851.1| laminin gamma-3 chain precursor [Mus musculus]
Length = 1537
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ H+ +C F+ ELY+ +G GG C +CR T G HC C++ YYR P P
Sbjct: 336 CNCSGHSEECTFDRELYRSTGH--GGHCQRCRDHTTGPHCERCEKNYYRWSPKTP 388
>gi|355701869|gb|EHH29222.1| hypothetical protein EGK_09586, partial [Macaca mulatta]
Length = 3314
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 333 EACNCHGHASDCYYDSDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 392
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 393 GVPVDAPDGC 402
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 1669 CNCNGHSNRCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 1705
>gi|297275088|ref|XP_001095558.2| PREDICTED: laminin subunit alpha-3 isoform 3 [Macaca mulatta]
Length = 3307
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHASDCYYDSDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPDGC 423
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 1661 CNCNGHSNRCQ-----------DGSGICVNCQHNTAGEHCERCQEGYY 1697
>gi|390353609|ref|XP_783877.3| PREDICTED: laminin subunit alpha-like [Strongylocentrotus
purpuratus]
Length = 1895
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 20 KKFRCSSRDRIF-FQTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAG 71
K +R SS F + CNC++H+ +C ++ E+ G GGVC C+H T G
Sbjct: 326 KAWRTSSYSSPFECERCNCHSHSNECVYDEEVALSRGSMDINGNMEGGGVCQNCQHNTVG 385
Query: 72 RHCHYCKEGYYRDPSRPITHRKACKK 97
+CH CK G+YR R + C+
Sbjct: 386 VNCHLCKPGFYRPEGRKQSDYDVCQP 411
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 29/62 (46%), Gaps = 13/62 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA +C S G CL+C H T G C CKEGYY D P A
Sbjct: 1807 CNCNGHASRCD-----------SKTGQCLECDHNTVGDQCESCKEGYYGD--APSGDPDA 1853
Query: 95 CK 96
CK
Sbjct: 1854 CK 1855
>gi|328776171|ref|XP_003249128.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1 [Apis
mellifera]
Length = 1611
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+CNCN ++ +C F+ ELYK++G GG CL CR G +C C+E +Y+ P
Sbjct: 307 SCNCNGYSERCFFDKELYKVTGH--GGHCLDCRANRDGANCERCRENFYQRP 356
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 12/51 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
CNCNNHA C + G C+ C H TAG +C CK GYY P
Sbjct: 694 CNCNNHADICE-----------AETGQCI-CEHNTAGSNCELCKRGYYGHP 732
>gi|291236750|ref|XP_002738301.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1918
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 28 DRIFFQT-CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
++++F T C+CN HA C ++ + K GVC C TAG C C GYYR+ S
Sbjct: 299 NKLYFLTFCDCNEHAANCSYDETVGK-------GVCEGCEDNTAGLFCEICVAGYYRNQS 351
Query: 87 RPITHRKAC 95
P+ C
Sbjct: 352 EPVNSPDVC 360
>gi|301617327|ref|XP_002938099.1| PREDICTED: laminin subunit alpha-1-like [Xenopus (Silurana)
tropicalis]
Length = 2972
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 33 QTCNCNNHARKCRF-------NMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ CNC+N A C + NM L + GGVCL C FTAG +C C EGYYR
Sbjct: 344 EKCNCHNKAEDCYYDQGVADRNMSLNINNQYIGGGVCLNCTQFTAGINCETCIEGYYR 401
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C CNNH+ C + G C CR T G HCH C G+Y
Sbjct: 1351 CQCNNHSEICDPDT-----------GKCQDCRDNTDGHHCHVCASGFY 1387
>gi|395729070|ref|XP_002809560.2| PREDICTED: laminin subunit beta-3 [Pongo abelii]
Length = 1194
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ + +
Sbjct: 336 QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTKGKNCERCQLHYFRNRRPGASIQ 395
Query: 93 KAC 95
+ C
Sbjct: 396 ETC 398
>gi|149058393|gb|EDM09550.1| lamimin, gamma 2 [Rattus norvegicus]
Length = 930
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ C+CN +R+C F+ EL++ +G +G CL C TAG HC C+EG+YR
Sbjct: 26 EVCDCNGKSRQCVFDQELHRQTG--NGFRCLNCNDNTAGVHCERCREGFYR 74
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C + TAG +C CK GY+ DP P
Sbjct: 515 QRCQCNNNVDP-SASGNCDQLTGR-----CLKCIYNTAGIYCDQCKAGYFGDPLAP 564
>gi|2429079|dbj|BAA22263.1| Laminin-5 beta3 chain [Homo sapiens]
Length = 1172
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ + +
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQ 373
Query: 93 KAC 95
+ C
Sbjct: 374 ETC 376
>gi|444729324|gb|ELW69748.1| Laminin subunit gamma-2 [Tupaia chinensis]
Length = 1219
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ C+CN +R+C F+ EL++ +G G CL C TAG HC C+EG+YR
Sbjct: 26 EVCDCNGKSRQCIFDQELHRRTGH--GFRCLNCEDNTAGLHCERCQEGFYR 74
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + L+GR CL+C H TAG HC CK GY+ DP P
Sbjct: 519 QPCQCNNNVDP-SASGNCDPLTGR-----CLKCIHNTAGAHCDQCKAGYFGDPLAP 568
>gi|354489048|ref|XP_003506676.1| PREDICTED: laminin subunit alpha-3 [Cricetulus griseus]
Length = 3192
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + S GGVC+ C+H TAG +C C +GYYR
Sbjct: 266 EACNCHGHAVDCYYDPDVEQQQASLNSKGTYSGGGVCINCQHNTAGVNCEKCAKGYYRPY 325
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 326 GVPVDALHGC 335
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC +CKEG+Y
Sbjct: 1600 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCEHCKEGHY 1636
>gi|397522398|ref|XP_003831255.1| PREDICTED: laminin subunit beta-3 isoform 1 [Pan paniscus]
gi|397522400|ref|XP_003831256.1| PREDICTED: laminin subunit beta-3 isoform 2 [Pan paniscus]
Length = 1171
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ + +
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQ 373
Query: 93 KAC 95
+ C
Sbjct: 374 ETC 376
>gi|410034399|ref|XP_003949737.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-3 [Pan
troglodytes]
Length = 1171
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+ + +
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQ 373
Query: 93 KAC 95
+ C
Sbjct: 374 ETC 376
>gi|395844376|ref|XP_003794938.1| PREDICTED: laminin subunit gamma-3 isoform 1 [Otolemur garnettii]
Length = 1579
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNC+ + +C F+ EL++ +G GG CL CR TAG HC +C+E +Y
Sbjct: 329 CNCSGRSEECTFDRELFRSTGH--GGRCLHCRDHTAGPHCEHCQENFY 374
>gi|363736534|ref|XP_422285.3| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-2 [Gallus
gallus]
Length = 1175
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ C+CN +R+C F+ +L +G +G CL C TAG HC CKEGYYR
Sbjct: 24 EACDCNGMSRQCVFDWQLLMETG--NGYRCLGCLGNTAGAHCERCKEGYYR 72
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
G CL+C + TAG HC CK+G++ +P P
Sbjct: 529 GECLKCIYNTAGFHCERCKDGFFGNPLAP 557
>gi|348578396|ref|XP_003474969.1| PREDICTED: laminin subunit gamma-2-like [Cavia porcellus]
Length = 1189
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C+CN +++C F+ EL+ +G +G CL C+ T G HC C+EG+YR P R
Sbjct: 25 EVCDCNGKSQQCIFDQELHWRTG--NGFRCLNCKDNTDGLHCERCREGFYRRPDR 77
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSG--GVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ SG G G CL+C H TAG +C CK GY+ DP P
Sbjct: 513 QPCQCNNNVDP--------SASGNCDGLTGRCLKCIHNTAGFNCDQCKAGYFGDPLAP 562
>gi|119621567|gb|EAX01162.1| hCG2038552, isoform CRA_b [Homo sapiens]
Length = 1284
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 318 EACNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 377
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 378 GVPVDAPDGC 387
>gi|510703|gb|AAA61834.1| laminin S B3 chain [Homo sapiens]
Length = 1170
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+
Sbjct: 313 QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRN 364
>gi|62868215|ref|NP_000219.2| laminin subunit beta-3 precursor [Homo sapiens]
gi|62868217|ref|NP_001017402.1| laminin subunit beta-3 precursor [Homo sapiens]
gi|189083719|ref|NP_001121113.1| laminin subunit beta-3 precursor [Homo sapiens]
gi|2497600|sp|Q13751.1|LAMB3_HUMAN RecName: Full=Laminin subunit beta-3; AltName: Full=Epiligrin
subunit bata; AltName: Full=Kalinin B1 chain; AltName:
Full=Kalinin subunit beta; AltName: Full=Laminin B1k
chain; AltName: Full=Laminin-5 subunit beta; AltName:
Full=Nicein subunit beta; Flags: Precursor
gi|747632|gb|AAC51352.1| laminin S B3 chain [Homo sapiens]
gi|14486412|gb|AAK61364.1| laminin 5 beta 3 subunit [Homo sapiens]
gi|49903714|gb|AAH75838.1| Laminin, beta 3 [Homo sapiens]
gi|168277734|dbj|BAG10845.1| laminin subunit beta-3 precursor [synthetic construct]
gi|190689405|gb|ACE86477.1| laminin, beta 3 protein [synthetic construct]
gi|190690767|gb|ACE87158.1| laminin, beta 3 protein [synthetic construct]
Length = 1172
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRN 365
>gi|410903774|ref|XP_003965368.1| PREDICTED: laminin subunit gamma-3-like [Takifugu rubripes]
Length = 1372
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNC+ + +C F+ E Y+ +G SGG CL CR T G HC C+E +YR
Sbjct: 303 CNCSGRSDQCVFDAEQYRSTG--SGGRCLSCRDLTDGPHCERCRENHYR 349
>gi|119613854|gb|EAW93448.1| laminin, beta 3, isoform CRA_a [Homo sapiens]
gi|119613855|gb|EAW93449.1| laminin, beta 3, isoform CRA_a [Homo sapiens]
Length = 1172
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
Q C+CN H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+
Sbjct: 314 QRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRN 365
>gi|62203479|gb|AAH93406.1| LAMA3 protein, partial [Homo sapiens]
Length = 581
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPDGC 423
>gi|395823207|ref|XP_003784882.1| PREDICTED: laminin subunit alpha-3 [Otolemur garnettii]
Length = 3213
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 357 EACNCHGHATDCYYDPDVEQQQASLNTQGVYAGGGVCINCKHNTAGVNCEKCAKGYYRPY 416
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 417 GVPVDAPHGC 426
>gi|344269950|ref|XP_003406810.1| PREDICTED: laminin subunit alpha-3 [Loxodonta africana]
Length = 3429
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 455 EACNCHGHAIDCYYDADVERQQASLNSQGIYAGGGVCINCQHNTAGVNCESCAKGYYRPH 514
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 515 GVPVDAPHGC 524
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC CKEG+Y
Sbjct: 1783 CNCNGHSNRCQ-----------DGSGICINCQHNTAGDHCERCKEGHY 1819
>gi|431896283|gb|ELK05699.1| Laminin subunit alpha-3 [Pteropus alecto]
Length = 3522
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMEL------YKLSGR-SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + G + GGVC+ C+H TAG +C C +GYYR
Sbjct: 531 EACNCHGHAIDCYYDPDVERQKASLNIEGNYAGGGVCINCQHNTAGINCEKCAKGYYRPY 590
Query: 86 SRPITHRKAC 95
P T C
Sbjct: 591 GVPATAPDGC 600
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C+CN H+ +C+ G+C+ C+H TAG HC CKEGYY
Sbjct: 1879 CSCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCKEGYY 1915
>gi|348536620|ref|XP_003455794.1| PREDICTED: laminin subunit alpha-1 [Oreochromis niloticus]
Length = 3050
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 33 QTCNCNNHARKCRFNMELYKLS-------GRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ CNC+N A C +N + LS R GGVC C+ TAG +C CK+GYYR
Sbjct: 323 EKCNCHNKADNCYYNQTISDLSLSLNTHGVRRGGGVCFNCQQNTAGINCETCKDGYYR 380
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 12/56 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT 90
C CN+HA +C + GVC+ C H T G HC C +G+Y D + T
Sbjct: 731 CECNDHATECDIH------------GVCVACTHNTTGSHCDQCLQGFYGDATEGTT 774
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G CL+C TAGRHC C+ GYY D H K C
Sbjct: 857 GECLRCLGNTAGRHCELCQPGYYGDA----VHTKDC 888
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C CNNH++ C + G C C+H T+G+ C C GYY
Sbjct: 1394 CRCNNHSQSCY-----------TETGECQDCKHHTSGQSCEKCASGYY 1430
>gi|194678084|ref|XP_001787324.1| PREDICTED: laminin subunit alpha-3 [Bos taurus]
Length = 2117
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H+ C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 497 EACNCHGHSTDCYYDPDVERQQASLNIQGLYAGGGVCINCQHNTAGVNCEKCAKGYYRPY 556
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 557 GIPVHAPDGC 566
>gi|324499457|gb|ADY39767.1| Basement membrane proteoglycan, partial [Ascaris suum]
Length = 4856
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
CNCNNH+ + G S G CL C H T G HC CK+G+Y D +R
Sbjct: 1775 CNCNNHSPR-----------GCDSFGRCLMCEHNTEGYHCEQCKKGFYGDATR 1816
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 11/59 (18%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
+ C C+ HA +C G C+ C+H T G C CK G+ D R H
Sbjct: 1717 ERCECHGHATQCD-----------KEHGFCVDCQHNTEGDQCERCKPGFVGDARRGTPH 1764
>gi|126352634|ref|NP_001075237.1| laminin subunit gamma-2 precursor [Equus caballus]
gi|67461054|sp|Q8HZI9.1|LAMC2_HORSE RecName: Full=Laminin subunit gamma-2; AltName: Full=Epiligrin
subunit gamma; AltName: Full=Kalinin subunit gamma;
AltName: Full=Laminin-5 subunit gamma; AltName:
Full=Nicein subunit gamma; Flags: Precursor
gi|24110903|gb|AAM03454.1| laminin 5 gamma 2 subunit [Equus caballus]
Length = 1190
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
Q C+CN +R+C F+ EL+K +G +G CL C T G HC CK G+YR R
Sbjct: 26 QVCDCNGKSRQCIFDQELHKQTG--NGFRCLNCNDNTDGIHCERCKAGFYRQRER 78
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG HC CK GYY DP P
Sbjct: 516 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGVHCDQCKAGYYGDPLAP 565
>gi|326435939|gb|EGD81509.1| laminin alpha 5 chain [Salpingoeca sp. ATCC 50818]
Length = 5486
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 16/69 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR---------DP 85
C CN HA C FN L + G+C C TAG +C C GYYR +P
Sbjct: 559 CECNGHASACAFNATL-------NTGICSDCDSQTAGDNCDTCDVGYYRAAGVSADATNP 611
Query: 86 SRPITHRKA 94
+P +H A
Sbjct: 612 CQPCSHCNA 620
>gi|395531283|ref|XP_003767711.1| PREDICTED: laminin subunit beta-3 [Sarcophilus harrisii]
Length = 1181
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD--PSRPI 89
Q C CN H+ C F+ ++ S SGGVC C+ T G +C C+ Y+R+ P PI
Sbjct: 323 QRCECNGHSETCHFDPAVFAASQGVSGGVCDNCQDHTEGNNCERCQLHYFRNRRPGAPI 381
>gi|301627002|ref|XP_002942671.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein-like [Xenopus (Silurana) tropicalis]
Length = 3985
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 13/62 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA C G CL C+H T G C+ CK G++ DP+R ++ A
Sbjct: 706 CNCNGHASSCD-----------PVSGYCLNCQHNTEGPQCNKCKAGFFGDPTRGVS--DA 752
Query: 95 CK 96
C+
Sbjct: 753 CR 754
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 11/54 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
+ C CN H+ C G C C H T G C C G+Y D S
Sbjct: 1432 EPCYCNGHSESCH-----------PETGACSNCLHNTVGESCDQCAPGFYGDAS 1474
>gi|74151107|dbj|BAE27677.1| unnamed protein product [Mus musculus]
Length = 135
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ C+CN +R+C F+ EL++ +G SG CL C TAG HC C+EG+YR
Sbjct: 26 EVCDCNGKSRQCVFDQELHRQTG--SGFRCLNCNDNTAGVHCERCREGFYR 74
>gi|1922889|emb|CAA58836.1| alpha 3A chain of laminin-5 [Mus musculus]
Length = 1724
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+ G+Y
Sbjct: 78 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCQAGHY 114
>gi|195127057|ref|XP_002007985.1| GI13252 [Drosophila mojavensis]
gi|193919594|gb|EDW18461.1| GI13252 [Drosophila mojavensis]
Length = 1641
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
+K R +S + + CNCNN A KC F+ L+ L+G GG CL CR G +C CK
Sbjct: 344 VKWKRATSTEVNECKACNCNNFADKCYFDANLFNLTGH--GGHCLDCRDNRDGPNCERCK 401
Query: 79 EGYY 82
E +Y
Sbjct: 402 ENFY 405
>gi|118600898|gb|AAH33663.1| LAMA3 protein [Homo sapiens]
Length = 401
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 173 EACNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 232
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 233 GVPVDAPDGC 242
>gi|2627429|gb|AAC51867.1| laminin alpha 3b chain [Homo sapiens]
Length = 1486
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 318 EACNCHGHASNCYYDPDVERHEASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 377
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 378 GVPVDAPDGC 387
>gi|77993334|ref|NP_001030158.1| laminin subunit alpha-1 precursor [Danio rerio]
gi|71370785|gb|AAZ30636.1| laminin alpha 1 [Danio rerio]
Length = 3075
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 33 QTCNCNNHARKCRFNMEL--YKLSGRS-----SGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ CNC+N A C +N + KLS + GGVC+ CRH TAG +C C +GYYR
Sbjct: 332 EKCNCHNKADDCFYNQTVADLKLSMNTHGQFTGGGVCVNCRHNTAGVNCETCADGYYR 389
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Query: 17 EHLKKFRCSSRDRIFFQTC---NCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRH 73
+ + + R+R Q C C+NH++ C + G CL C+H TAG H
Sbjct: 1386 QAVSELNMKGRNRPLIQPCVPCRCSNHSQSCDLHT-----------GQCLGCQHNTAGEH 1434
Query: 74 CHYCKEGYY 82
CH C GYY
Sbjct: 1435 CHVCAAGYY 1443
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 12/53 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C CN+HA +C N G CL C H T G HC C G+Y D S
Sbjct: 745 CECNDHATECDIN------------GECLGCAHNTTGPHCDQCLPGFYGDASE 785
>gi|291224195|ref|XP_002732092.1| PREDICTED: usherin-like [Saccoglossus kowalevskii]
Length = 5112
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 11/83 (13%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRF---NMELYKLSGRSSGGVCLQCRHFTAGR 72
G+ + + C + C C HA C + R GGVC C+H TAG
Sbjct: 550 GDQVNAYNC--------KPCECYGHATSCSYIESEDPFPNDHNRGGGGVCTNCQHNTAGN 601
Query: 73 HCHYCKEGYYRDPSRPITHRKAC 95
C CK YYR+ + + C
Sbjct: 602 RCDQCKTNYYRELGKSLDAIDVC 624
>gi|281338276|gb|EFB13860.1| hypothetical protein PANDA_000445 [Ailuropoda melanoleuca]
Length = 3244
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 257 EACNCHGHALDCYYDPDVERQQASLNIHGIYAGGGVCINCQHNTAGINCENCAKGYYRPY 316
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 317 GVPVDAPHGC 326
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C+CN H+ +C+ G+C+ C+H TAG HC CKEG+Y
Sbjct: 1597 CDCNGHSSRCQ-----------DGSGICINCQHNTAGDHCERCKEGHY 1633
>gi|301753723|ref|XP_002912719.1| PREDICTED: laminin subunit alpha-3-like [Ailuropoda melanoleuca]
Length = 3294
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 310 EACNCHGHALDCYYDPDVERQQASLNIHGIYAGGGVCINCQHNTAGINCENCAKGYYRPY 369
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 370 GVPVDAPHGC 379
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C+CN H+ +C+ G+C+ C+H TAG HC CKEG+Y
Sbjct: 1646 CDCNGHSSRCQ-----------DGSGICINCQHNTAGDHCERCKEGHY 1682
>gi|353232810|emb|CCD80166.1| putative laminin [Schistosoma mansoni]
Length = 3085
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 33 QTCNCNNHARKCRFNMEL--YKLSGR-----SSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ CNCN A +C +N + +LS R GGVCL CR T G +C CK+GYYR
Sbjct: 337 EECNCNQKADECIYNQTVANLRLSMRKDGVLEGGGVCLNCREDTTGVNCEKCKQGYYR 394
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACK 96
GVC+ C H TAG C C G+Y DP KACK
Sbjct: 833 GVCIDCAHNTAGDKCDICAPGFYGDPRT--GDPKACK 867
>gi|61744143|gb|AAX55655.1| laminin alpha 1 [Danio rerio]
Length = 3062
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 33 QTCNCNNHARKCRFNMEL--YKLSGRS-----SGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ CNC+N A C +N + KLS + GGVC+ CRH TAG +C C +GYYR
Sbjct: 332 EKCNCHNKADDCFYNQTVADLKLSMNTHGQFTGGGVCVNCRHNTAGVNCETCADGYYR 389
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Query: 17 EHLKKFRCSSRDRIFFQTC---NCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRH 73
+ + + R+R Q C C+NH++ C + G CL C+H TAG H
Sbjct: 1386 QAVSELNMKGRNRPLIQPCVPCRCSNHSQSCDLHT-----------GQCLGCQHNTAGEH 1434
Query: 74 CHYCKEGYY 82
CH C GYY
Sbjct: 1435 CHVCAAGYY 1443
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 12/53 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C CN+HA +C N G CL C H T G HC C G+Y D S
Sbjct: 745 CECNDHATECDIN------------GECLGCAHNTTGPHCDQCLPGFYGDASE 785
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACK 96
G CL+C TAG HC C++GYY D H K C+
Sbjct: 871 GECLKCVGHTAGPHCERCRDGYYGD----AIHEKNCQ 903
>gi|198431367|ref|XP_002126899.1| PREDICTED: similar to alpha 3,4,5-laminin [Ciona intestinalis]
Length = 3766
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 33 QTCNCNNHARKCRFNMELYK------LSGR-SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H+ +C+++ ++ + L+G GGVCL C H TAG +C C GY+R
Sbjct: 332 EACNCHGHSSECQYDEDVARRRLSIDLAGNYEGGGVCLNCLHNTAGINCEQCASGYWRPS 391
Query: 86 S 86
S
Sbjct: 392 S 392
>gi|156547421|ref|XP_001604560.1| PREDICTED: laminin subunit gamma-1-like [Nasonia vitripennis]
Length = 1617
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNCN ++ C F+ ELY+L+G GG C CR G +C +C+E YY P
Sbjct: 336 KPCNCNGYSDTCYFDKELYRLTGH--GGHCTDCRDNRDGANCEHCRENYYARP 386
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
Query: 35 CNCNNHARKCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
C CNN N++L + G CL+C + TAG HC C GYY D
Sbjct: 824 CECNN-------NIDLNAVRNCNQETGECLKCVNNTAGAHCEECLPGYYGD 867
>gi|403265441|ref|XP_003924947.1| PREDICTED: laminin subunit alpha-3 [Saimiri boliviensis
boliviensis]
Length = 3394
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 414 EACNCHGHTSDCYYDPDVEQQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 473
Query: 86 SRPITHRKAC 95
P+ +C
Sbjct: 474 GVPVDAPDSC 483
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 1748 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCQEGYY 1784
>gi|345803358|ref|XP_003435052.1| PREDICTED: laminin subunit alpha-3 isoform 2 [Canis lupus
familiaris]
Length = 3281
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHAIDCYYDPDVERQQASLNIHGIYAGGGVCINCQHNTAGINCENCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPHGC 423
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 11/50 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
CNCN H+ +C+ G+C+ C+H TAG HC CKEG+YR+
Sbjct: 1690 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCKEGHYRN 1728
>gi|405969732|gb|EKC34685.1| Laminin subunit alpha [Crassostrea gigas]
Length = 3659
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 20 KKFRCSSRDRIFF-QTCNCNNHARKCRFNMELYKLS-------GRSSGGVCLQCRHFTAG 71
KK++ + D+IF + C C HA +C ++ E+ +L+ GGVC C+H T G
Sbjct: 320 KKWKQARADKIFMCEPCECYGHATECLYDEEVDRLALSVDMYGNYQGGGVCQNCQHNTYG 379
Query: 72 RHCHYCKEGYYR 83
+C C GYYR
Sbjct: 380 INCDQCAAGYYR 391
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 11/50 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
C+CN HA C + G CL CR T G+HC C GYY D
Sbjct: 1825 CSCNGHADSCD-----------TETGECLNCRDNTMGKHCEECLPGYYGD 1863
>gi|73961821|ref|XP_537297.2| PREDICTED: laminin subunit alpha-3 isoform 4 [Canis lupus
familiaris]
Length = 3337
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 354 EACNCHGHAIDCYYDPDVERQQASLNIHGIYAGGGVCINCQHNTAGINCENCAKGYYRPY 413
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 414 GVPVDAPHGC 423
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 11/50 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
CNCN H+ +C+ G+C+ C+H TAG HC CKEG+YR+
Sbjct: 1690 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCKEGHYRN 1728
>gi|358255034|dbj|GAA56722.1| laminin gamma 1, partial [Clonorchis sinensis]
Length = 2041
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPIT 90
C CN +++ C F+++LY +G SG C+ C + T G +C CK GY+ DP P
Sbjct: 187 PCKCNGNSQLCEFDLDLYDQTG--SGSRCIGCGNNTEGINCERCKTGYFPDPVYPTV 241
>gi|74218256|dbj|BAE23763.1| unnamed protein product [Mus musculus]
Length = 1056
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+ G+Y
Sbjct: 78 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCQAGHY 114
>gi|296222399|ref|XP_002757170.1| PREDICTED: laminin subunit alpha-3 isoform 2 [Callithrix jacchus]
Length = 3280
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 357 EACNCHGHTSDCYYDPDVEQQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 416
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 417 GVPVDAPDGC 426
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 1690 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCQEGYY 1726
>gi|390473860|ref|XP_003734678.1| PREDICTED: laminin subunit alpha-3 [Callithrix jacchus]
Length = 3338
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 357 EACNCHGHTSDCYYDPDVEQQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 416
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 417 GVPVDAPDGC 426
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 1692 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCQEGYY 1728
>gi|296222397|ref|XP_002757169.1| PREDICTED: laminin subunit alpha-3 isoform 1 [Callithrix jacchus]
Length = 3336
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 357 EACNCHGHTSDCYYDPDVEQQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPY 416
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 417 GVPVDAPDGC 426
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+EGYY
Sbjct: 1690 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCQEGYY 1726
>gi|443711350|gb|ELU05178.1| hypothetical protein CAPTEDRAFT_214680 [Capitella teleta]
Length = 1318
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C C +HA C ++++ + G+C C H T G++C C GYY + S P+
Sbjct: 369 QKCQCYDHAESCEYSID-------DAMGICENCTHNTEGKNCQLCIPGYYHNASVPLNDP 421
Query: 93 KAC 95
C
Sbjct: 422 NTC 424
>gi|7920157|gb|AAF70550.1|AF151717_1 putative extracellular matrix protein MUSH2A [Mus musculus]
Length = 1461
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 19/88 (21%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGR 72
G+++ F C + C C+ HA C ++ + R GGVC C+H T GR
Sbjct: 561 GDNVNAFNC--------KPCQCHGHASSCHYDASVDPFPLEHNRGGGGVCDDCQHHTTGR 612
Query: 73 HCHYCKEGYYR----DPSRPITHRKACK 96
HC C++ +YR DP+ P ACK
Sbjct: 613 HCESCQDYFYRSVGADPAAP----DACK 636
>gi|426253989|ref|XP_004020671.1| PREDICTED: laminin subunit alpha-3 [Ovis aries]
Length = 3334
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ GVC+ C+H TAG HC CKEGYY
Sbjct: 1686 CNCNGHSNRCQ-----------DGSGVCINCQHNTAGEHCERCKEGYY 1722
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H+ C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 349 EACNCHGHSTDCYYDPDVERQQASLNIQGLYAGGGVCINCQHNTAGVNCEKCAKGYYRPY 408
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 409 GIPVHAPDGC 418
>gi|148681092|gb|EDL13039.1| mCG140683 [Mus musculus]
Length = 1461
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 19/88 (21%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS---GRSSGGVCLQCRHFTAGR 72
G+++ F C + C C+ HA C ++ + R GGVC C+H T GR
Sbjct: 561 GDNVNAFNC--------KPCQCHGHASSCHYDASVDPFPLEHNRGGGGVCDDCQHHTTGR 612
Query: 73 HCHYCKEGYYR----DPSRPITHRKACK 96
HC C++ +YR DP+ P ACK
Sbjct: 613 HCESCQDYFYRPVGADPAAP----DACK 636
>gi|334321820|ref|XP_001375368.2| PREDICTED: laminin subunit gamma-2 [Monodelphis domestica]
Length = 1190
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C+CN +R+C F+ EL + +G+ G C+ C TAG HC CK+G+YR R
Sbjct: 25 EDCDCNGKSRQCVFDQELQRRTGK--GFRCVNCNDNTAGVHCERCKDGFYRQRDR 77
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDP--SRPITHRKAC 95
G CL+C + TAG HC CKEG++ +P + P +AC
Sbjct: 535 GECLKCTYNTAGFHCDRCKEGFFGNPLATNPADKCRAC 572
>gi|1922891|emb|CAA58837.1| alpha 3B chain of laminin-5 [Mus musculus]
Length = 2569
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+ G+Y
Sbjct: 923 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCQAGHY 959
>gi|358334367|dbj|GAA52816.1| laminin alpha 1/2, partial [Clonorchis sinensis]
Length = 3545
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 33 QTCNCNNHARKCRFNMEL--YKLSGR-----SSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ CNC+ A C FN + +LS R GGVC+ CR T G +C CK GYYR
Sbjct: 346 EECNCHGKADSCVFNQTVANLRLSQRKDGVFEGGGVCVDCREDTTGINCESCKPGYYR 403
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 33 QTCNCNNHARK----CRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C C N A K C N + R +CL C +T GR+C C EGYY P +
Sbjct: 897 QPCECPNLANKKTGSCVANEQAPPTDLRPY--LCLDCEDYTRGRYCELCIEGYYGQPEKG 954
Query: 89 ITHRK 93
I +K
Sbjct: 955 IPCQK 959
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C C+ H+ C G C C+H TAG C C G+Y DP
Sbjct: 849 CECHGHSAHCD-----------ERTGKCTDCQHNTAGDKCELCAPGFYGDP 888
>gi|297662524|ref|XP_002809752.1| PREDICTED: laminin subunit gamma-2 [Pongo abelii]
Length = 1059
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPASRATSRREV----CDCNGKSRQCIFDQELHRQTG--NGFRCLNCNDNTDGIHCERCK 69
Query: 79 EGYYR 83
+G+YR
Sbjct: 70 DGFYR 74
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 381 QPCQCNNNVDPS-ASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 430
>gi|50979208|ref|NP_001003351.1| laminin subunit gamma-2 precursor [Canis lupus familiaris]
gi|17998675|gb|AAL54875.1| laminin-5 gamma 2 [Canis lupus familiaris]
Length = 1196
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
Q C+CN +R+C F+ EL++ +G +G CL C T G C +CK+G+YR R
Sbjct: 26 QVCDCNGKSRQCVFDQELHRQTG--NGFRCLNCNDNTDGPRCEHCKDGFYRQRER 78
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C + TAG HC CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIYNTAGVHCDQCKAGYFGDPLAP 564
>gi|348517124|ref|XP_003446085.1| PREDICTED: laminin subunit alpha-5 [Oreochromis niloticus]
Length = 3663
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMEL------YKLSGR-SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H+ C ++ E+ + G GGVCL C+H T G +C C YYR P
Sbjct: 346 EPCNCHRHSFDCYYDPEVDERRASLDIHGHYRGGGVCLNCQHHTTGVNCERCVPTYYRSP 405
Query: 86 SRPITHRKACKK 97
PI AC
Sbjct: 406 DHPIHSPLACSP 417
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C+CN H+ +C L G G+C+ CRH TAG HC C+ G+
Sbjct: 1846 CSCNGHSDQC--------LDG---SGICVNCRHNTAGDHCERCQGGFL 1882
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
Q C+C+ ++ + + L+G CL C H TAG C C GYY D
Sbjct: 1951 QPCDCSGNSDPNMLFTDCHPLTGH-----CLSCMHNTAGPRCESCAPGYYGD 1997
>gi|2497594|sp|Q01635.1|LAMB1_CHICK RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin
beta-1-1 chain; AltName: Full=Laminin-1 subunit beta;
AltName: Full=Laminin-10 subunit beta; AltName:
Full=Laminin-12 subunit beta; AltName: Full=Laminin-2
subunit beta; AltName: Full=Laminin-6 subunit beta;
AltName: Full=Laminin-8 subunit beta
gi|212241|gb|AAA48935.1| laminin B1, partial [Gallus gallus]
Length = 303
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAG 71
CNCN H+ +C F+M +Y +G +SGGVC C+H T G
Sbjct: 267 CNCNGHSTQCHFDMAVYMATGNTSGGVCDDCQHNTGG 303
>gi|393905913|gb|EJD74110.1| laminin subunit beta-1 [Loa loa]
Length = 1779
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 55 GRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKAC 95
G SGGVC +C H T G++C CK +YR+P RPIT C
Sbjct: 351 GFVSGGVCDECLHNTQGKNCEQCKPYFYRNPDRPITDPYVC 391
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 11/52 (21%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN+HA C G C+ C T G +C CK+GYY DP
Sbjct: 858 VCQCNDHASICD-----------QKTGACIDCLDLTDGYYCDRCKDGYYGDP 898
>gi|345806227|ref|XP_859704.2| PREDICTED: netrin-G2 isoform 3 [Canis lupus familiaris]
Length = 700
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 32 FQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
FQ C C H+ +C + L ++ C+ C+H T G+HC +C+ GYYR+ S +
Sbjct: 520 FQDCECYGHSNRCSYIDFLNVVT-------CVSCKHNTRGQHCQHCRLGYYRNGSAELDD 572
Query: 92 RKAC 95
C
Sbjct: 573 ENVC 576
>gi|350586008|ref|XP_003482090.1| PREDICTED: laminin subunit alpha-3-like [Sus scrofa]
Length = 1770
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 353 EACNCHGHAIDCYYDPDVERQQASLNIQGIYAGGGVCINCQHNTAGVNCEKCAKGYYRPY 412
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 413 GVPVHAPDGC 422
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNC+ H+ +C+ G+C+ C+H TAG HC CKEGYY
Sbjct: 1688 PCNCHGHSNRCK-----------DGSGICINCQHNTAGEHCERCKEGYY 1725
>gi|441623763|ref|XP_003276796.2| PREDICTED: laminin subunit gamma-3 [Nomascus leucogenys]
Length = 1556
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC +C+E +Y DP P
Sbjct: 327 CNCSGRSEECTFDRELFRSTGH--GGHCHHCRDHTAGPHCEHCQENFYHWDPRMP 379
>gi|224073548|ref|XP_002195417.1| PREDICTED: laminin subunit gamma-3 [Taeniopygia guttata]
Length = 1546
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNC+ + +C ++ EL++ +G GG CL CR TAG HC C++ YYR
Sbjct: 325 CNCSGRSEECFYDRELFRRTGH--GGHCLNCRDNTAGPHCESCRQNYYR 371
>gi|348534124|ref|XP_003454553.1| PREDICTED: usherin [Oreochromis niloticus]
Length = 5191
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNM-------ELYKLSGRSSGGVCLQCRHF 68
G+ L+ C + C C+ HA C +++ E Y R GGVC C H
Sbjct: 393 GDQLQPMNC--------RPCQCHGHALSCHYDVLADDHPDEHY----RGGGGVCDNCMHN 440
Query: 69 TAGRHCHYCKEGYYRDPSRPITHRKACK 96
T G++C C G++R R T C+
Sbjct: 441 TTGKNCEQCISGFFRLEDRDPTSVDVCQ 468
>gi|440903481|gb|ELR54132.1| Laminin subunit alpha-3, partial [Bos grunniens mutus]
Length = 3301
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC CKEGYY
Sbjct: 1653 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCKEGYY 1689
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H+ C ++ ++ + + GGVC+ C+H TAG +C C +GYYR
Sbjct: 310 EACNCHGHSTDCYYDPDVERQQASLNIQGLYAGGGVCINCQHNTAGVNCEKCAKGYYRPY 369
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 370 GIPVHAHDGC 379
>gi|351703413|gb|EHB06332.1| Laminin subunit beta-3 [Heterocephalus glaber]
Length = 1173
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
Q C+C+ H+ C F+ ++ S + GGVC CR T G++C C+ Y+R+
Sbjct: 313 QRCDCSGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGQNCERCQLHYFRN 364
>gi|2137468|pir||S69000 laminin gamma 2 chain - mouse
Length = 1192
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C+CN +R+C F+ EL++ +G SG CL C TAG HC +EG+Y+ S+
Sbjct: 26 EVCDCNGKSRQCVFDQELHRQAG--SGFRCLNCNDNTAGVHCERSREGFYQHQSK 78
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C + TAG +C CK GY+ DP P
Sbjct: 516 QRCQCNNNVDP-NASGNCDQLTGR-----CLKCIYNTAGVYCDQCKAGYFGDPLAP 565
>gi|187607312|ref|NP_001120605.1| laminin, alpha 5 precursor [Xenopus (Silurana) tropicalis]
gi|171846410|gb|AAI61643.1| LOC100145762 protein [Xenopus (Silurana) tropicalis]
Length = 1649
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 16 GEHLKKFRCSSRDRIF-FQTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRH 67
G H ++ +++D + CNCN HA C ++ E+ + GGVC+ C+H
Sbjct: 322 GYHQLPWKPATKDNANECEPCNCNGHAYDCYYDPEVERRRASMDQHGDFVGGGVCVDCQH 381
Query: 68 FTAGRHCHYCKEGYYRDPSRPITHRKACKK 97
T G +C C GYY+ P P C +
Sbjct: 382 NTDGVNCERCIVGYYKSPDHPSDSPHTCLR 411
>gi|395511709|ref|XP_003760096.1| PREDICTED: laminin subunit alpha-1 [Sarcophilus harrisii]
Length = 3087
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 12/55 (21%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
Q C C++HA +C + GVCL C+H TAG HC C G+Y +PSR
Sbjct: 748 QPCECHSHATECDIH------------GVCLTCKHNTAGAHCDQCSPGFYGNPSR 790
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 33 QTCNCNNHARKCRFNMELY--KLSGRSSG-----GVCLQCRHFTAGRHCHYCKEGYYR 83
+ CNC+N + C ++ + K S ++G GVC+ C TAG +C C +GYYR
Sbjct: 333 EECNCHNKTKDCYYDQSVADRKKSMNTAGHFKGGGVCVNCLQNTAGINCETCIDGYYR 390
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C+CNNH C G CL CR T G HC+ C GYY
Sbjct: 1411 CHCNNHTETCH-----------PETGKCLNCRDNTVGDHCNVCAPGYY 1447
>gi|332230514|ref|XP_003264437.1| PREDICTED: laminin subunit gamma-2 [Nomascus leucogenys]
Length = 1160
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDQELHRHTG--NGFRCLNCNDNTDGIHCERCK 69
Query: 79 EGYYR 83
+G+YR
Sbjct: 70 DGFYR 74
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 482 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 531
>gi|426226075|ref|XP_004007179.1| PREDICTED: netrin-G2 [Ovis aries]
Length = 566
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 32 FQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
F+ C C H+ +C + L ++ C+ C+H T G+HC +C+ GYYR+ S +
Sbjct: 458 FEDCECYGHSNRCSYIDFLNVVT-------CVSCKHNTRGQHCQHCRLGYYRNGSAELDD 510
Query: 92 RKAC 95
C
Sbjct: 511 ENVC 514
>gi|126297894|ref|XP_001369858.1| PREDICTED: laminin subunit gamma-3 [Monodelphis domestica]
Length = 1585
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNC+ + +C ++ ELY+ +G GG C CR T+G HC +C+E +YR
Sbjct: 329 CNCSGLSEECFYDWELYRSTGH--GGHCQNCRDHTSGPHCEHCQENFYR 375
>gi|405956263|gb|EKC22989.1| Laminin subunit gamma-1 [Crassostrea gigas]
Length = 381
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
Q C CN A +C F+ LY+ +GR GG C+ CR T G C CK+ + R P+
Sbjct: 287 QRCECNGKADRCYFDENLYQTTGR--GGRCVDCRDNTDGPQCERCKDNFVRGPN 338
>gi|71998537|ref|NP_497044.3| Protein UNC-52, isoform e [Caenorhabditis elegans]
gi|30179887|sp|Q06561.2|UNC52_CAEEL RecName: Full=Basement membrane proteoglycan; AltName: Full=Perlecan
homolog; AltName: Full=Uncoordinated protein 52;
Short=Protein unc-52; Flags: Precursor
gi|3881359|emb|CAB07708.1| Protein UNC-52, isoform e [Caenorhabditis elegans]
Length = 3375
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1011 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1052
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 953 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>gi|167525854|ref|XP_001747261.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774096|gb|EDQ87728.1| predicted protein [Monosiga brevicollis MX1]
Length = 2044
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 35 CNCNNHARKCRFNMEL-YKLSGRS--SGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
C CN HA C ++ L S R+ +GG CL C+H T G +C C G+YR+P+ IT
Sbjct: 363 CECNGHADACVYDAALDSNPSSRTQGNGGRCLDCQHHTTGPNCDRCAAGFYRNPAADITA 422
Query: 92 RKAC 95
AC
Sbjct: 423 PDAC 426
>gi|296191036|ref|XP_002743458.1| PREDICTED: laminin subunit gamma-3 [Callithrix jacchus]
Length = 1516
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 329 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPQMP 381
>gi|308484131|ref|XP_003104266.1| CRE-UNC-52 protein [Caenorhabditis remanei]
gi|308258235|gb|EFP02188.1| CRE-UNC-52 protein [Caenorhabditis remanei]
Length = 3425
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1031 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1072
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 973 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 1016
>gi|148669615|gb|EDL01562.1| mCG115886, isoform CRA_a [Mus musculus]
Length = 757
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+ G+Y
Sbjct: 78 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCQAGHY 114
>gi|156371064|ref|XP_001628586.1| predicted protein [Nematostella vectensis]
gi|156215566|gb|EDO36523.1| predicted protein [Nematostella vectensis]
Length = 1586
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R SSR+ CNCN A C F+ LY+ +G GG C C+ T G +C CKE +Y
Sbjct: 312 RASSRNANECVRCNCNGLAESCVFDEALYRQTGH--GGRCQNCKQNTDGPNCERCKENFY 369
Query: 83 RDPS 86
R S
Sbjct: 370 RKTS 373
>gi|449494739|ref|XP_002195244.2| PREDICTED: laminin subunit alpha-3 [Taeniopygia guttata]
Length = 3421
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + GGVC+ C+H TAG +C C +GYYR
Sbjct: 423 EPCNCHGHATDCFYDADVDQQRASLNIHGHYEGGGVCINCQHNTAGINCEKCAKGYYRPY 482
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 483 GVPVRAPDGC 492
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
CNCN ++ +C+ G C+ C++ TAG C +CK+GY+ D ++
Sbjct: 1723 CNCNGNSNRCQ-----------DGTGKCIDCQYNTAGEKCEHCKDGYFGDATQ 1764
>gi|332231940|ref|XP_003265155.1| PREDICTED: usherin [Nomascus leucogenys]
Length = 1546
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 564 GDQVHAFNC--------KPCQCNSHSKSCHYNISVDPFPSEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR 83
+C CK+ ++R
Sbjct: 616 NCELCKDYFFR 626
>gi|392354548|ref|XP_003751790.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-3 [Rattus
norvegicus]
Length = 3287
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ GVC+ C+H TAG HC C+EGYY
Sbjct: 1686 CNCNGHSNRCQ-----------DGSGVCINCQHNTAGEHCERCQEGYY 1722
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ + + + GGVC+ C+H TAG +C C +GY+R
Sbjct: 350 EACNCHGHAVDCYYDEAVSRQQASLNSKGVYTGGGVCIDCQHNTAGVNCEKCAKGYFRPH 409
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 410 GVPVEALHGC 419
>gi|392334060|ref|XP_003753074.1| PREDICTED: laminin subunit alpha-3 [Rattus norvegicus]
Length = 3333
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ GVC+ C+H TAG HC C+EGYY
Sbjct: 1686 CNCNGHSNRCQ-----------DGSGVCINCQHNTAGEHCERCQEGYY 1722
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ + + + GGVC+ C+H TAG +C C +GY+R
Sbjct: 350 EACNCHGHAVDCYYDEAVSRQQASLNSKGVYTGGGVCIDCQHNTAGVNCEKCAKGYFRPH 409
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 410 GVPVEALHGC 419
>gi|348500775|ref|XP_003437948.1| PREDICTED: laminin subunit alpha-3 [Oreochromis niloticus]
Length = 3244
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 16 GEHLKKFRCSSRDRIFF-QTCNCNNHARKCRFNMELYKLS------GR-SSGGVCLQCRH 67
G + K +R ++ D Q C C +HA C ++ E+ K GR GGVC+ C+H
Sbjct: 326 GFNQKPWRAATVDNPNECQPCQCFSHAFDCYYDPEVEKRGTSLDTFGRFDGGGVCINCQH 385
Query: 68 FTAGRHCHYCKEGYYRDPSRPITHRKAC 95
TAG +C C EG+YR P C
Sbjct: 386 NTAGVNCERCIEGFYRPYGVPTESPTGC 413
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 17/25 (68%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRD 84
G CL CR+ TAG C CK+GYY D
Sbjct: 1723 GRCLNCRYNTAGDRCERCKDGYYGD 1747
>gi|403266347|ref|XP_003925350.1| PREDICTED: laminin subunit gamma-2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1193
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G G CL C T G HC CK
Sbjct: 16 LPAGRATSRREV----CDCNGKSRQCIFDQELHRQTGH--GFRCLNCNDNTDGIHCERCK 69
Query: 79 EGYYR 83
+G+YR
Sbjct: 70 DGFYR 74
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDQLTGR-----CLKCIHNTAGIYCDQCKPGYFGDPLAP 564
>gi|341898523|gb|EGT54458.1| CBN-UNC-52 protein [Caenorhabditis brenneri]
Length = 3382
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1007 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1048
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 949 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 992
>gi|357622603|gb|EHJ74029.1| putative laminin A chain [Danaus plexippus]
Length = 3687
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 16 GEHLKKFRCSSR-DRIFFQTCNCNNHARKCRFNMEL------YKLSGR-SSGGVCLQCRH 67
G KK+R S DR + CNC+NH +C ++ E+ + G GGVC C+H
Sbjct: 304 GFEQKKWRISQNWDRFACEPCNCHNHTTECEYDAEIDEKHLSLDIHGLYEGGGVCKNCQH 363
Query: 68 FTAGRHCHYCKEGYYRDPSRPITHRKACKK 97
T G +C+ CK +YR + C+
Sbjct: 364 NTEGINCNKCKPTFYRPYGKTWDELDVCQP 393
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 11/56 (19%)
Query: 31 FFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
F C CN H+++C N G+CL+C T G HC C GY+ D +
Sbjct: 1800 FCVPCQCNGHSKECDVNT-----------GICLECTDNTMGDHCEQCIPGYHGDAT 1844
>gi|432089377|gb|ELK23328.1| Laminin subunit gamma-2 [Myotis davidii]
Length = 1211
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ C+CN +++C F+ EL++ +G G CL C T G HC CKEG+YR
Sbjct: 25 EVCDCNGKSQQCVFDPELHRQTGH--GFRCLNCNDNTGGIHCERCKEGFYR 73
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG HC CK GY+ +P P
Sbjct: 514 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGAHCDQCKAGYFGNPLAP 563
>gi|363736407|ref|XP_001234659.2| PREDICTED: LOW QUALITY PROTEIN: laminin subunit gamma-1 [Gallus
gallus]
Length = 1603
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
C+CN +++C F+ ELY+ +G GG C+ CR T G HC C++ +YR
Sbjct: 336 CDCNGRSQECYFDPELYRSTGH--GGHCMGCRDNTDGAHCERCRDSFYR 382
>gi|390351676|ref|XP_796271.3| PREDICTED: laminin subunit alpha-5-like, partial
[Strongylocentrotus purpuratus]
Length = 1195
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 29/62 (46%), Gaps = 13/62 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN HA +C S G CL+C H T G C CKEGYY D P A
Sbjct: 888 CNCNGHASRCD-----------SKTGQCLECDHNTVGDQCESCKEGYYGDA--PSGDPDA 934
Query: 95 CK 96
CK
Sbjct: 935 CK 936
>gi|338728071|ref|XP_001494653.3| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-3 [Equus
caballus]
Length = 3279
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGR-------SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + + GGVC+ C+H TAG +C C +GY+R
Sbjct: 321 EACNCHGHAIDCYYDPDVERQQASLNIQGIYAGGGVCINCQHNTAGVNCEKCAKGYFRPY 380
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 381 GIPLDAPDGC 390
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 11/50 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
C+CN H+ +C+ G+C+ C+H TAG HC CKEG+YR+
Sbjct: 1657 CSCNGHSHRCQ-----------DGSGICINCQHNTAGNHCERCKEGHYRN 1695
>gi|296229570|ref|XP_002760328.1| PREDICTED: laminin subunit gamma-2 isoform 1 [Callithrix jacchus]
Length = 1193
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G G CL C T G HC CK
Sbjct: 16 LPAGRATSRREV----CDCNGKSRQCIFDQELHRQTGH--GFRCLNCNDNTDGIHCERCK 69
Query: 79 EGYYR 83
+G+YR
Sbjct: 70 DGFYR 74
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|410294892|gb|JAA26046.1| laminin, gamma 2 [Pan troglodytes]
Length = 1193
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDQLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|397489308|ref|XP_003815672.1| PREDICTED: laminin subunit gamma-2 [Pan paniscus]
Length = 1193
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDQLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|410266922|gb|JAA21427.1| laminin, gamma 2 [Pan troglodytes]
Length = 1193
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDQLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|392892549|ref|NP_001254439.1| Protein UNC-52, isoform l [Caenorhabditis elegans]
gi|379697495|emb|CCG28430.1| Protein UNC-52, isoform l [Caenorhabditis elegans]
Length = 2193
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 722 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 763
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 664 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 707
>gi|114568350|ref|XP_001162731.1| PREDICTED: laminin subunit gamma-2 isoform 1 [Pan troglodytes]
gi|410220114|gb|JAA07276.1| laminin, gamma 2 [Pan troglodytes]
Length = 1193
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDQLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|14148770|gb|AAK17015.1| netrin-3, partial [Rattus norvegicus]
Length = 333
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/22 (81%), Positives = 21/22 (95%)
Query: 35 CNCNNHARKCRFNMELYKLSGR 56
C+CN HAR+CRFNMELY+LSGR
Sbjct: 311 CSCNGHARRCRFNMELYRLSGR 332
>gi|34230|emb|CAA78728.1| Laminin [Homo sapiens]
Length = 1193
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CN++ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNSNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|147899718|ref|NP_001090659.1| laminin subunit gamma-1 precursor [Xenopus (Silurana) tropicalis]
gi|224493162|sp|A0JP86.1|LAMC1_XENTR RecName: Full=Laminin subunit gamma-1; Flags: Precursor
gi|117558099|gb|AAI27298.1| lamc1 protein [Xenopus (Silurana) tropicalis]
Length = 1592
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
CNCN +++C F+ ELY+ +G GG C C T G +C C+E YYR + H
Sbjct: 325 CNCNGRSQECYFDPELYRSTGH--GGHCTGCADNTDGPNCERCRENYYRQDNNEPCHACQ 382
Query: 95 CKKV 98
C V
Sbjct: 383 CNPV 386
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 12/50 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
C CN H+ C GVC C+H TAG HC C EGYY D
Sbjct: 707 CTCNGHSDTCD-----------PESGVC-DCQHNTAGPHCERCSEGYYGD 744
>gi|1236323|gb|AAC50457.1| laminin gamma2 chain [Homo sapiens]
gi|1588296|prf||2208311B laminin:SUBUNIT=gamma2
Length = 1193
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|432116571|gb|ELK37364.1| Netrin-G2 [Myotis davidii]
Length = 445
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 32 FQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
FQ C C H+ +C + L ++ C+ C+H T G+HC +C+ G+YR+ S +
Sbjct: 300 FQDCECYGHSNRCSYIDFLNVVT-------CVSCKHNTRGQHCQHCRLGFYRNGSAELDD 352
Query: 92 RKAC 95
C
Sbjct: 353 ENVC 356
>gi|157419138|ref|NP_005553.2| laminin subunit gamma-2 isoform a precursor [Homo sapiens]
gi|90185107|sp|Q13753.2|LAMC2_HUMAN RecName: Full=Laminin subunit gamma-2; AltName:
Full=Cell-scattering factor 140 kDa subunit; Short=CSF
140 kDa subunit; AltName: Full=Epiligrin subunit gamma;
AltName: Full=Kalinin subunit gamma; AltName:
Full=Kalinin/nicein/epiligrin 100 kDa subunit; AltName:
Full=Ladsin 140 kDa subunit; AltName: Full=Laminin B2t
chain; AltName: Full=Laminin-5 subunit gamma; AltName:
Full=Large adhesive scatter factor 140 kDa subunit;
AltName: Full=Nicein subunit gamma; Flags: Precursor
gi|119611553|gb|EAW91147.1| laminin, gamma 2, isoform CRA_b [Homo sapiens]
Length = 1193
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|426332998|ref|XP_004028075.1| PREDICTED: laminin subunit gamma-2 [Gorilla gorilla gorilla]
Length = 1193
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|405967923|gb|EKC33039.1| Usherin [Crassostrea gigas]
Length = 5843
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 33 QTCNCNNHARKCRFNMEL------YKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ C C+NH+ C +N L + L G GGVC C+ FTAG+ C C Y+R
Sbjct: 549 KPCECHNHSSSCVYNASLDLFPDDHDLGG---GGVCENCQDFTAGQFCETCIPLYFR 602
>gi|119613742|gb|EAW93336.1| hCG23154 [Homo sapiens]
Length = 1546
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 564 GDQVYAFNC--------KPCQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVGADPS 633
>gi|426333776|ref|XP_004028446.1| PREDICTED: usherin-like [Gorilla gorilla gorilla]
Length = 1548
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 564 GDQVYAFNC--------KPCQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVGIDPS 633
>gi|289722|gb|AAA28156.1| basement membrane proteoglycan [Caenorhabditis elegans]
Length = 2481
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1010 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1051
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 952 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 995
>gi|392892567|ref|NP_001254446.1| Protein UNC-52, isoform o [Caenorhabditis elegans]
gi|379697493|emb|CCG28428.1| Protein UNC-52, isoform o [Caenorhabditis elegans]
Length = 2479
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1011 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1052
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 953 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>gi|219842259|ref|NP_009054.5| usherin isoform A [Homo sapiens]
Length = 1546
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 564 GDQVYAFNC--------KPCQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVGADPS 633
>gi|17536621|ref|NP_497046.1| Protein UNC-52, isoform a [Caenorhabditis elegans]
gi|3881357|emb|CAB07706.1| Protein UNC-52, isoform a [Caenorhabditis elegans]
Length = 2482
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1011 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1052
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 953 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>gi|403266349|ref|XP_003925351.1| PREDICTED: laminin subunit gamma-2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1010
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G G CL C T G HC CK
Sbjct: 16 LPAGRATSRREV----CDCNGKSRQCIFDQELHRQTGH--GFRCLNCNDNTDGIHCERCK 69
Query: 79 EGYYR 83
+G+YR
Sbjct: 70 DGFYR 74
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDQLTGR-----CLKCIHNTAGIYCDQCKPGYFGDPLAP 564
>gi|19584002|gb|AAC23748.2| Usher syndrome type IIa protein [Homo sapiens]
Length = 1546
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 564 GDQVYAFNC--------KPCQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVGADPS 633
>gi|395749706|ref|XP_002828100.2| PREDICTED: laminin subunit alpha-1 [Pongo abelii]
Length = 2383
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 12/55 (21%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
Q C C+ HA +C + GVC+ C H T G HC C G+Y +PSR
Sbjct: 735 QACECHGHAAECDVH------------GVCIACAHNTTGDHCEQCLPGFYGEPSR 777
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 16/72 (22%)
Query: 33 QTCNCNNHARKCRFNMELYK------LSGR-SSGGVCLQCRHFTAGRHCHYCKEGYYR-- 83
+ CNC+N A+ C ++ + K +G+ GGVC+ C T G +C C +GYYR
Sbjct: 320 EACNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETCIDGYYRPH 379
Query: 84 -------DPSRP 88
+P RP
Sbjct: 380 KVSPYEDEPCRP 391
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C+CNNH+ C G CL C TAG HC C GYY
Sbjct: 844 CSCNNHSDTCD-----------PDTGKCLNCGDNTAGDHCDVCASGYY 880
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 20 KKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKE 79
+++ S +D C C HA C ++ KL QC H T G C+ C
Sbjct: 250 RRYYYSIKDISVGGMCICYGHASSCPWDETTKKLQ--------CQCEHNTCGESCNRCCP 301
Query: 80 GYYRDPSRPIT 90
GY++ P RP T
Sbjct: 302 GYHQQPWRPGT 312
>gi|301609245|ref|XP_002934184.1| PREDICTED: laminin subunit alpha-3-like [Xenopus (Silurana)
tropicalis]
Length = 3303
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ G GGVC+ C+H TAG +C C +GYYR
Sbjct: 330 EPCNCHGHASDCYYDADIDTRKGSLDIYGQYRGGGVCINCQHNTAGVNCERCAKGYYRPY 389
Query: 86 SRP 88
P
Sbjct: 390 GVP 392
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGY 81
C CN H+ +C+ G+C+ C H T G +C +CKEGY
Sbjct: 1675 CMCNGHSNRCQ-----------DGSGICINCLHDTTGDYCEFCKEGY 1710
>gi|260797338|ref|XP_002593660.1| hypothetical protein BRAFLDRAFT_131952 [Branchiostoma floridae]
gi|229278887|gb|EEN49671.1| hypothetical protein BRAFLDRAFT_131952 [Branchiostoma floridae]
Length = 3505
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C H TAGR+C C GYY D +R
Sbjct: 980 EPCQCNGHAEECD-----------DVTGTCLSCLHNTAGRNCEVCAPGYYGDATR 1023
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYK-------LSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ C C HA +C ++ + L GGVC CR T G +C C +G+YR
Sbjct: 462 EACQCFGHADECVYDQGVADRRESVNILGIYEGGGVCQNCRANTMGNNCEQCIDGFYRPA 521
Query: 86 SRPITHRKACKK 97
P C++
Sbjct: 522 GIPRDDPNPCRE 533
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 12/63 (19%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CNNH+ +C G+C C T G++C C +G++ + + P
Sbjct: 1602 CDCNNHSAECD-----------QITGICENCDDNTTGQNCENCADGFFGN-AVPGADDSG 1649
Query: 95 CKK 97
CK+
Sbjct: 1650 CKR 1652
>gi|34232|emb|CAA78729.1| Laminin [Homo sapiens]
Length = 1111
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CN++ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNSNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|392892554|ref|NP_001254441.1| Protein UNC-52, isoform d [Caenorhabditis elegans]
gi|211970508|emb|CAR97861.1| Protein UNC-52, isoform d [Caenorhabditis elegans]
Length = 2455
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1011 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1052
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 953 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>gi|390477005|ref|XP_003735225.1| PREDICTED: laminin subunit gamma-2 isoform 2 [Callithrix jacchus]
Length = 1010
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G G CL C T G HC CK
Sbjct: 16 LPAGRATSRREV----CDCNGKSRQCIFDQELHRQTGH--GFRCLNCNDNTDGIHCERCK 69
Query: 79 EGYYR 83
+G+YR
Sbjct: 70 DGFYR 74
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHR 92
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAPNPAN 568
Query: 93 K 93
K
Sbjct: 569 K 569
>gi|8515086|gb|AAF75819.1| Usher syndrome type IIa protein [Homo sapiens]
Length = 1546
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSG---RSSGGVCLQCRHFTAGR 72
G+ + F C + C CN+H++ C +N+ + R GGVC C H T GR
Sbjct: 564 GDQVYAFNC--------KPCQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGR 615
Query: 73 HCHYCKEGYYR----DPS 86
+C CK+ ++R DPS
Sbjct: 616 NCELCKDYFFRQVGADPS 633
>gi|348041325|ref|NP_742045.2| usherin isoform 2 [Rattus norvegicus]
Length = 1551
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 20 KKFRCSSRDRIFF-QTCNCNNHARKCRFN--MELYKLS-GRSSGGVCLQCRHFTAGRHCH 75
K FR ++ F + C C+ HA C ++ M+ + L R GGVC C+H T GR+C
Sbjct: 594 KPFRSGNKVHAFNCKPCQCHGHASSCHYDASMDPFPLEYNRGGGGVCDDCQHHTTGRNCE 653
Query: 76 YCKEGYYR----DPSRP 88
C++ +YR DP+ P
Sbjct: 654 SCQDYFYRPIGADPADP 670
>gi|85566965|gb|AAI12287.1| Laminin, gamma 2 [Homo sapiens]
Length = 1111
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|157419140|ref|NP_061486.2| laminin subunit gamma-2 isoform b precursor [Homo sapiens]
gi|109730447|gb|AAI13379.1| Laminin, gamma 2 [Homo sapiens]
gi|119611552|gb|EAW91146.1| laminin, gamma 2, isoform CRA_a [Homo sapiens]
Length = 1111
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|1280520|gb|AAC50456.1| alternatively spliced laminin gamma2 chain [Homo sapiens]
gi|1588295|prf||2208311A laminin:SUBUNIT=gamma2
Length = 1111
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|91092436|ref|XP_968632.1| PREDICTED: similar to laminin gamma 1 chain [Tribolium castaneum]
Length = 1615
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 23 RCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
R ++RD + CNCN + +C ++ ELY+L+G GG CL C G +C C+E YY
Sbjct: 326 RATARDAHECKQCNCNGFSNRCYYDEELYRLTGH--GGHCLDCTANRDGPNCERCRENYY 383
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 12/48 (25%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C+CN HA+ C S G C+ C H TAG +C +C GYY
Sbjct: 724 CDCNQHAQICD-----------SETGRCI-CEHNTAGENCEFCARGYY 759
>gi|47228486|emb|CAG05306.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1724
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 33 QTCNCNNHARKCRFNMELYKLSG-------RSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ CNC+N A C +N + +LS R GGVC+ C+ TAG +C C +GYYR
Sbjct: 330 EKCNCHNKATDCFYNQTVAELSLSLDLHGLRRGGGVCVSCQQNTAGVNCESCVDGYYR 387
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 13/49 (26%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCL-QCRHFTAGRHCHYCKEGYY 82
C CN+HA +C S GVCL C H T+G HC C G+Y
Sbjct: 733 CECNDHATEC------------DSAGVCLVSCAHNTSGPHCEECLPGFY 769
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 20 KKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKE 79
+++ S +D C C HA+ C ++ KL C+ C H T G C+ C
Sbjct: 260 RRYYYSIKDISVGGMCICYGHAQSCPLDLVTKKLQ-------CV-CEHNTCGESCNECCP 311
Query: 80 GYYRDPSRP--ITHRKACKK 97
GY++ P +P ++ C+K
Sbjct: 312 GYHQQPWQPGTVSEGNTCEK 331
>gi|71998539|ref|NP_001022488.1| Protein UNC-52, isoform f [Caenorhabditis elegans]
gi|50507820|emb|CAH04744.1| Protein UNC-52, isoform f [Caenorhabditis elegans]
Length = 2389
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1011 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1052
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 953 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>gi|392892563|ref|NP_001254445.1| Protein UNC-52, isoform n [Caenorhabditis elegans]
gi|379697492|emb|CCG28427.1| Protein UNC-52, isoform n [Caenorhabditis elegans]
Length = 2388
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1011 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1052
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 953 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>gi|392892560|ref|NP_001254444.1| Protein UNC-52, isoform m [Caenorhabditis elegans]
gi|379697491|emb|CCG28426.1| Protein UNC-52, isoform m [Caenorhabditis elegans]
Length = 2383
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1011 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1052
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 953 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>gi|260797342|ref|XP_002593662.1| hypothetical protein BRAFLDRAFT_131954 [Branchiostoma floridae]
gi|229278889|gb|EEN49673.1| hypothetical protein BRAFLDRAFT_131954 [Branchiostoma floridae]
Length = 2475
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C H TAGR+C C GYY D +R
Sbjct: 222 EPCQCNGHAEECD-----------DVTGTCLSCLHNTAGRNCEVCAPGYYGDATR 265
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 12/63 (19%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKA 94
C+CNNH+ +C G+C C T G++C C +G++ + + P
Sbjct: 893 CDCNNHSAECD-----------QITGICENCDDNTTGQNCENCADGFFGN-AVPGADDSG 940
Query: 95 CKK 97
CK+
Sbjct: 941 CKR 943
>gi|81866683|sp|Q8K3K1.1|USH2A_RAT RecName: Full=Usherin; AltName: Full=Usher syndrome type IIa
protein homolog; AltName: Full=Usher syndrome type-2A
protein homolog; Flags: Precursor
gi|22212216|gb|AAL78289.1| usherin [Rattus norvegicus]
Length = 1512
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 20 KKFRCSSRDRIFF-QTCNCNNHARKCRFN--MELYKLS-GRSSGGVCLQCRHFTAGRHCH 75
K FR ++ F + C C+ HA C ++ M+ + L R GGVC C+H T GR+C
Sbjct: 555 KPFRSGNKVHAFNCKPCQCHGHASSCHYDASMDPFPLEYNRGGGGVCDDCQHHTTGRNCE 614
Query: 76 YCKEGYYR----DPSRP 88
C++ +YR DP+ P
Sbjct: 615 SCQDYFYRPIGADPADP 631
>gi|392892551|ref|NP_001254440.1| Protein UNC-52, isoform k [Caenorhabditis elegans]
gi|379697494|emb|CCG28429.1| Protein UNC-52, isoform k [Caenorhabditis elegans]
Length = 2296
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1011 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1052
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 953 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>gi|195998782|ref|XP_002109259.1| hypothetical protein TRIADDRAFT_21436 [Trichoplax adhaerens]
gi|190587383|gb|EDV27425.1| hypothetical protein TRIADDRAFT_21436 [Trichoplax adhaerens]
Length = 991
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY----RDPSR 87
C CN A C FN LY+ +G SGG+C+ CR+ G +C C YY DPS+
Sbjct: 188 CKCNGLAESCNFNRTLYEATG--SGGICVGCRNGATGINCQKCLSAYYPIDRNDPSK 242
>gi|226423935|ref|NP_034810.1| laminin subunit alpha-3 precursor [Mus musculus]
Length = 3330
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMEL----YKLSGR---SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ L+ + + GGVC+ C+H TAG +C C +GY+R
Sbjct: 351 EACNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYFRPH 410
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 411 GVPVDALHGC 420
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+ G+Y
Sbjct: 1684 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCQAGHY 1720
>gi|17536619|ref|NP_497045.1| Protein UNC-52, isoform c [Caenorhabditis elegans]
gi|3881358|emb|CAB07707.1| Protein UNC-52, isoform c [Caenorhabditis elegans]
Length = 2295
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1011 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1052
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 953 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>gi|47228221|emb|CAG07616.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3224
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMELYK------LSGR-SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
Q C C +HA C ++ E+ K GR GGVC+ C+H TAG +C C EG+YR
Sbjct: 341 QPCQCFSHASDCFYDPEVEKNRASLDTFGRYDGGGVCINCQHNTAGVNCERCIEGFYRPF 400
Query: 86 SRPITHRKAC 95
P C
Sbjct: 401 GVPPESPSGC 410
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C CN HA +C G CL CR+ TAG C CKEGYY
Sbjct: 1870 CECNGHAEECE-----------DKTGRCLNCRYNTAGDRCERCKEGYY 1906
>gi|23831284|sp|Q61789.3|LAMA3_MOUSE RecName: Full=Laminin subunit alpha-3; AltName: Full=Epiligrin
subunit alpha; AltName: Full=Kalinin subunit alpha;
AltName: Full=Laminin-5 subunit alpha; AltName:
Full=Laminin-6 subunit alpha; AltName: Full=Laminin-7
subunit alpha; AltName: Full=Nicein subunit alpha;
Flags: Precursor
Length = 3333
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMEL----YKLSGR---SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ L+ + + GGVC+ C+H TAG +C C +GY+R
Sbjct: 351 EACNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYFRPH 410
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 411 GVPVDALHGC 420
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+ G+Y
Sbjct: 1687 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCQAGHY 1723
>gi|392892558|ref|NP_001254443.1| Protein UNC-52, isoform j [Caenorhabditis elegans]
gi|379697497|emb|CCG28432.1| Protein UNC-52, isoform j [Caenorhabditis elegans]
Length = 2289
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1011 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1052
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 953 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>gi|194384666|dbj|BAG59493.1| unnamed protein product [Homo sapiens]
Length = 1010
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
L R +SR + C+CN +R+C F+ EL++ +G +G CL C T G HC CK
Sbjct: 16 LPAARATSRREV----CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCK 69
Query: 79 EGYYR 83
G+YR
Sbjct: 70 NGFYR 74
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|156354022|ref|XP_001623203.1| predicted protein [Nematostella vectensis]
gi|156209878|gb|EDO31103.1| predicted protein [Nematostella vectensis]
Length = 1440
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSG-GVCLQCRHFTAGRHCHYCKEGYYRDPSRPITH 91
+ C CNNH+ C ++ S G GVCL C T G C CK +YR+P P+ H
Sbjct: 300 EDCGCNNHSASCEYH--------SSKGYGVCLNCTDNTMGDKCEQCKPEFYRNPDTPLNH 351
Query: 92 RKAC 95
C
Sbjct: 352 TNTC 355
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH C GVC+ C+H T G HC C G Y D +
Sbjct: 1108 CSCNNHTDTCD-----------PESGVCIDCQHNTTGDHCEKCAVGLYGDATN 1149
>gi|268562267|ref|XP_002646632.1| C. briggsae CBR-UNC-52 protein [Caenorhabditis briggsae]
Length = 2295
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1009 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1050
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 951 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 994
>gi|148669616|gb|EDL01563.1| mCG115886, isoform CRA_b [Mus musculus]
Length = 2272
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMEL----YKLSGR---SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ L+ + + GGVC+ C+H TAG +C C +GY+R
Sbjct: 260 EACNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYFRPH 319
Query: 86 SRPITHRKAC 95
P+ C
Sbjct: 320 GVPVDALHGC 329
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCN H+ +C+ G+C+ C+H TAG HC C+ G+Y
Sbjct: 1593 CNCNGHSNRCQ-----------DGSGICINCQHNTAGEHCERCQAGHY 1629
>gi|391344663|ref|XP_003746615.1| PREDICTED: laminin subunit alpha-like [Metaseiulus occidentalis]
Length = 912
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA CR+N + +L + GGVC+ C H T G +C CK YYR
Sbjct: 194 EKCNCHEHAHTCRYNATVEELGLSKNINGQYIGGGVCIDCMHNTDGINCEKCKPKYYRLQ 253
Query: 86 SRPITHRKACKK 97
+ +T C +
Sbjct: 254 GKYLTDEDVCGR 265
>gi|383866057|ref|XP_003708488.1| PREDICTED: laminin subunit alpha-like [Megachile rotundata]
Length = 3680
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 16 GEHLKKFRCSSRDRIFF-QTCNCNNHARKCRFNMEL--YKLS-----GRSSGGVCLQCRH 67
G KK+R S+ + F + CNC H+ +C ++ E+ KLS GGVC CR
Sbjct: 329 GFEQKKWRISTAFKKFTCEPCNCFGHSDECVYDAEVDEKKLSLDIHGNYEGGGVCQNCRD 388
Query: 68 FTAGRHCHYCKEGYYRDPSRPITHRKACKK 97
T G +C+ CK +YR +P+ C+
Sbjct: 389 NTEGINCNRCKPKFYRPRDKPLNATDVCQP 418
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C CN HA C G+CL C+ T G HC +C+EGYY
Sbjct: 1809 CECNGHADTCDVET-----------GICLDCKDGTTGDHCEFCQEGYY 1845
>gi|392892556|ref|NP_001254442.1| Protein UNC-52, isoform i [Caenorhabditis elegans]
gi|379697496|emb|CCG28431.1| Protein UNC-52, isoform i [Caenorhabditis elegans]
Length = 2196
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
C+CNNH+ + G S G CL C H T G HC CK+GYY D ++
Sbjct: 1011 CHCNNHSPR-----------GCDSFGRCLLCEHNTEGTHCERCKKGYYGDATK 1052
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 11/55 (20%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ C CN HA +C G CL C+H T G C CK G+ D R
Sbjct: 953 EKCECNGHASQCD-----------KEYGYCLDCQHNTEGDQCERCKPGFVGDARR 996
>gi|452755|emb|CAA52108.1| nicein [Homo sapiens]
gi|740962|prf||2006240A nicein:SUBUNIT=100kD
Length = 1193
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ C+CN +R+C F+ EL++ +G +G CL C T G HC CK G+YR
Sbjct: 26 EVCDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCKNGFYR 74
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRP 88
Q C CNN+ + +L+GR CL+C H TAG +C CK GY+ DP P
Sbjct: 515 QPCQCNNNVDP-SASGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAP 564
>gi|449677846|ref|XP_002170373.2| PREDICTED: laminin subunit alpha-like, partial [Hydra
magnipapillata]
Length = 3342
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 20 KKFRCSSRDRIFF--QTCNCNNHARKCRFN--MELYKLS-----GRSSGGVCLQCRHFTA 70
KK+R + RD+ F + CNC+ H +C +N +E KLS S GGVC C+H T
Sbjct: 112 KKWR-TRRDKDDFVCEKCNCHEHTEECEYNEDIEQRKLSLDINGVYSGGGVCKNCQHNTD 170
Query: 71 GRHCHYCKEGYYRDPSRPITHRKACK 96
G +C CK +YR +T C+
Sbjct: 171 GINCEKCKPFFYRPSGVKVTDVNTCQ 196
>gi|363730920|ref|XP_426078.3| PREDICTED: laminin subunit alpha-3 [Gallus gallus]
Length = 3364
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 16 GEHLKKFRCSSRDRIFF-QTCNCNNHARKCRFNMEL------YKLSGR-SSGGVCLQCRH 67
G + K+++ ++ I + CNC+ HA C ++ ++ + G GGVC+ C+H
Sbjct: 333 GYNQKQWQPATAGNINICEPCNCHGHATDCYYDADVDQRRESLNIHGHYEGGGVCINCQH 392
Query: 68 FTAGRHCHYCKEGYYRDPSRPITHRKAC 95
TAG +C C +GYYR P C
Sbjct: 393 NTAGVNCEKCAKGYYRPYGVPARAPDGC 420
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
CNCN ++ +C G C+ C++ TAG C CK+GY+ D ++
Sbjct: 1719 CNCNGNSNRCH-----------DGTGKCINCQYNTAGEKCELCKDGYFGDATQ 1760
>gi|348543037|ref|XP_003458990.1| PREDICTED: laminin subunit gamma-1-like [Oreochromis niloticus]
Length = 1596
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN + +C F+ ELY+ +G GG C C T G +C C + YYRDP
Sbjct: 328 CECNGKSAECYFDAELYRATGH--GGHCRNCADNTDGPNCERCLDNYYRDP 376
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 12/55 (21%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
+ CNCN+H+ C N G C C+ TAG C C++G+Y D ++
Sbjct: 708 EPCNCNDHSETCDPNT-----------GAC-DCQDNTAGLSCERCQDGFYGDATQ 750
>gi|149040991|gb|EDL94948.1| rCG20263, isoform CRA_b [Rattus norvegicus]
Length = 1003
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 20 KKFRCSSRDRIFF-QTCNCNNHARKCRFN--MELYKLS-GRSSGGVCLQCRHFTAGRHCH 75
K FR ++ F + C C+ HA C ++ M+ + L R GGVC C+H T GR+C
Sbjct: 555 KPFRSGNKVHAFNCKPCQCHGHASSCHYDASMDPFPLEYNRGGGGVCDDCQHHTTGRNCE 614
Query: 76 YCKEGYYR----DPSRP 88
C++ +YR DP+ P
Sbjct: 615 SCQDYFYRPIGADPADP 631
>gi|319996723|ref|NP_001188452.1| laminin gamma-1 precursor [Oryzias latipes]
gi|300793580|dbj|BAJ11755.1| laminin gamma-1 [Oryzias latipes]
Length = 1595
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
+CNCN + +C F+ ELY+ +G GG C C T G +C C + YYRD S
Sbjct: 327 SCNCNGKSAECYFDPELYRATGH--GGHCRNCADNTDGPNCERCLDNYYRDQS 377
>gi|383861111|ref|XP_003706030.1| PREDICTED: laminin subunit alpha-1 [Megachile rotundata]
Length = 1034
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 33 QTCNCNNHARKCRFNMEL------YKLSGR-SSGGVCLQCRHFTAGRHCHYCKEGYYR 83
+ CNCN HA CR++ ++ + G+ GGVC+ C TAG +C C+ GYYR
Sbjct: 341 EKCNCNGHATSCRYDQDVADRRMSMDIRGKFRGGGVCINCTEHTAGINCEKCQVGYYR 398
>gi|14165136|gb|AAK55397.1|AF373841_1 laminin gamma 1 [Gallus gallus]
Length = 1007
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
C+CN +++C F+ ELY+ +G GG C+ CR T G HC C++ +YR
Sbjct: 97 CDCNGRSQECYFDPELYRSTGH--GGHCMGCRDNTDGAHCERCRDSFYR 143
>gi|241626256|ref|XP_002409634.1| laminin gamma-1 chain, putative [Ixodes scapularis]
gi|215503204|gb|EEC12698.1| laminin gamma-1 chain, putative [Ixodes scapularis]
Length = 1278
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNCN +RKC F+ ELY +G GG C+ C T G +C C+E +Y+
Sbjct: 1 CNCNGRSRKCYFDKELYDRTGH--GGHCINCSDNTDGPNCERCRENFYQ 47
>gi|242020772|ref|XP_002430825.1| laminin A chain, putative [Pediculus humanus corporis]
gi|212516028|gb|EEB18087.1| laminin A chain, putative [Pediculus humanus corporis]
Length = 1616
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 34 TCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNCN ++ +C F+ ELY+ +G GG C+ C F G +C CKE Y++
Sbjct: 331 ACNCNGYSNRCYFDKELYEQTGH--GGHCIDCVGFRDGPNCERCKENYFQ 378
>gi|149040990|gb|EDL94947.1| rCG20263, isoform CRA_a [Rattus norvegicus]
Length = 1119
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 20 KKFRCSSRDRIFF-QTCNCNNHARKCRFN--MELYKLS-GRSSGGVCLQCRHFTAGRHCH 75
K FR ++ F + C C+ HA C ++ M+ + L R GGVC C+H T GR+C
Sbjct: 555 KPFRSGNKVHAFNCKPCQCHGHASSCHYDASMDPFPLEYNRGGGGVCDDCQHHTTGRNCE 614
Query: 76 YCKEGYYR----DPSRP 88
C++ +YR DP+ P
Sbjct: 615 SCQDYFYRPIGADPADP 631
>gi|27545301|ref|NP_775382.1| laminin subunit beta-1 precursor [Danio rerio]
gi|21538979|gb|AAM61767.1|AF468049_1 laminin beta 1 [Danio rerio]
Length = 1785
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 46 FNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSRPITHRKACK 96
F+M +Y+ SG SGGVC C+H T G +C CK +++ P + I C+
Sbjct: 343 FDMAVYRASGNVSGGVCDDCQHNTMGHNCEQCKPFFHQHPEKDIRDPNICE 393
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 11/51 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
C CN HA +C G CL CR T G +C C GYY DP
Sbjct: 863 CTCNGHAEQCD-----------PQTGQCLSCRDHTTGHNCERCLGGYYGDP 902
>gi|410928442|ref|XP_003977609.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5-like
[Takifugu rubripes]
Length = 3607
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYKLSGRSS-------GGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ H+ C ++ E+ + G GGVCL C+H T G +C C YYR P
Sbjct: 250 EPCNCHRHSFDCYYDPEVDQRRGSLDAHGHYRGGGVCLNCQHHTTGVNCERCIPTYYRSP 309
Query: 86 SRPITHRKACKK 97
+ AC +
Sbjct: 310 DYTLDSSLACSR 321
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 11/52 (21%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPS 86
CNCN H+ +C L G G C+ C+H TAG HC C+ G++ + S
Sbjct: 1757 CNCNGHSDRC--------LDG---SGTCVDCQHNTAGDHCEKCQGGFHGNSS 1797
>gi|332833149|ref|XP_003312402.1| PREDICTED: laminin subunit gamma-3, partial [Pan troglodytes]
Length = 460
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 327 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 379
>gi|22761744|dbj|BAC11679.1| unnamed protein product [Homo sapiens]
Length = 529
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 327 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 379
>gi|390339367|ref|XP_793438.3| PREDICTED: usherin [Strongylocentrotus purpuratus]
Length = 5278
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Query: 16 GEHLKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLS----GRSSGGVCLQCRHFTAG 71
G+ + + C + C C HA C +N E +S R GGVC C+ T G
Sbjct: 550 GDQINAYNC--------KPCQCYGHASSCFYN-ETLDVSPDRHDRGGGGVCSNCQDNTNG 600
Query: 72 RHCHYCKEGYYRDPSRPITHRKAC 95
+ C C EG+++ P+ C
Sbjct: 601 QQCDQCVEGFFKLDGVPLDSTDIC 624
>gi|194747760|ref|XP_001956319.1| GF25144 [Drosophila ananassae]
gi|190623601|gb|EDV39125.1| GF25144 [Drosophila ananassae]
Length = 1640
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
+K R +S + + CNCN A KC F+ L+ L+G GG CL CR G +C CK
Sbjct: 343 VKWKRATSTEVNECKACNCNGLADKCFFDAHLFNLTGH--GGHCLDCRENRDGPNCERCK 400
Query: 79 EGYY 82
E +Y
Sbjct: 401 ENFY 404
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 60 GVCLQCRHFTAGRHCHYCKEGYYRDP 85
G CL+C H TAG HC C G++ DP
Sbjct: 867 GECLKCIHNTAGEHCDLCLPGHFGDP 892
>gi|355752985|gb|EHH57031.1| hypothetical protein EGM_06590, partial [Macaca fascicularis]
Length = 674
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 247 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 299
>gi|47204205|emb|CAG14049.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 29 RIFFQTCNCNNHARKCRFNMELYKLS-------GRSSGGVCLQCRHFTAGRHCHYCKEGY 81
R + CNC+ A +C FN + LS R GGVC+ CR +TAG +C C G+
Sbjct: 35 RHICEKCNCHGKAEECHFNQTVADLSLSLDIHGQRRGGGVCVGCRDYTAGINCETCIPGF 94
Query: 82 YR 83
YR
Sbjct: 95 YR 96
>gi|194867588|ref|XP_001972103.1| GG14069 [Drosophila erecta]
gi|190653886|gb|EDV51129.1| GG14069 [Drosophila erecta]
Length = 3725
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 16 GEHLKKFRCSSRDRIFF-QTCNCNNHARKCRFNMELYKLSGRS--------SGGVCLQCR 66
G KK+R ++ R F + CNC+ H+ +C+++ E+ + G S GGVC C+
Sbjct: 313 GFEQKKWRQNTNARPFNCEPCNCHGHSTECKYDEEVNR-KGLSLDIHGHYDGGGVCQNCQ 371
Query: 67 HFTAGRHCHYCKEGYYR 83
H T G +C+ CK YYR
Sbjct: 372 HNTVGTNCNKCKPKYYR 388
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C CN H+ C + G+C C+H T G HC C GYY
Sbjct: 1809 CECNGHSETCD-----------CATGICSNCQHGTQGEHCEQCVSGYY 1845
>gi|149036255|gb|EDL90914.1| laminin, alpha 1 (predicted) [Rattus norvegicus]
Length = 1805
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
CNCNNH+ C G CL CR TAG HC C GYY
Sbjct: 132 CNCNNHSDVCD-----------PETGKCLNCRDHTAGDHCELCTAGYY 168
>gi|355567395|gb|EHH23736.1| hypothetical protein EGK_07272, partial [Macaca mulatta]
Length = 697
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR-DPSRP 88
CNC+ + +C F+ EL++ +G GG C CR TAG HC C+E +Y DP P
Sbjct: 270 CNCSGRSEECTFDRELFRSTGH--GGRCHHCRDHTAGPHCERCQENFYHWDPRMP 322
>gi|326917515|ref|XP_003205044.1| PREDICTED: laminin subunit alpha-3-like [Meleagris gallopavo]
Length = 3356
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 33 QTCNCNNHARKCRFNMEL------YKLSGR-SSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ CNC+ HA C ++ ++ + G GGVC+ C+H TAG +C C +GYYR
Sbjct: 369 EPCNCHGHATDCYYDADVDQRRESLNIHGHYEGGGVCINCQHNTAGVNCEKCAKGYYRPY 428
Query: 86 SRPITHRKAC 95
P C
Sbjct: 429 GVPARAPDGC 438
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDPSR 87
CNCN ++ +C G C+ C++ TAG C CK+GY+ D ++
Sbjct: 1711 CNCNGNSNRCH-----------DGTGKCINCQYNTAGEKCELCKDGYFGDATQ 1752
>gi|332020404|gb|EGI60824.1| Laminin subunit alpha [Acromyrmex echinatior]
Length = 3661
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 16 GEHLKKFRCSSRDRIFF-QTCNCNNHARKCRF--NMELYKLS-----GRSSGGVCLQCRH 67
G KK+R S+ + F + CNC H+ +C + N++ LS GG+C C+H
Sbjct: 309 GFEQKKWRQSTASQKFICEPCNCFGHSDECIYDPNIDEKHLSLDIHGNYEGGGICQNCKH 368
Query: 68 FTAGRHCHYCKEGYYRDPSRPITHRKACKK 97
T G +C+ CK +YR +P+ C+
Sbjct: 369 NTEGINCNRCKPKFYRPWDKPLNATDVCQP 398
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYY 82
C CN HA C N G+C C++ T G HC +C++GYY
Sbjct: 1785 CQCNGHATTCDVNT-----------GICQNCKNGTTGDHCEFCEQGYY 1821
>gi|47213443|emb|CAF89550.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1389
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 48 MELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
M +Y SG SGGVC C+H T G C CK YYRDP
Sbjct: 1 MAVYLASGNVSGGVCDHCQHNTMGHACDMCKPFYYRDP 38
>gi|195428901|ref|XP_002062504.1| GK16620 [Drosophila willistoni]
gi|194158589|gb|EDW73490.1| GK16620 [Drosophila willistoni]
Length = 1645
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 19 LKKFRCSSRDRIFFQTCNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCK 78
+K R +S + + CNCN A KC F+ L+ L+G GG CL CR G +C CK
Sbjct: 348 VKWKRATSTEVNECKACNCNGLADKCYFDSHLFNLTGH--GGHCLDCRENRDGPNCERCK 405
Query: 79 EGYY 82
E +Y
Sbjct: 406 ENFY 409
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 31 FFQTC-NCNNHARKCRFNMELYKLSG-RSSGGVCLQCRHFTAGRHCHYCKEGYYRDP 85
F QTC +C+ C N++ + + G CL+C H TAG HC C G++ DP
Sbjct: 846 FVQTCKSCD-----CNGNVDPNAVGNCNRTTGECLKCIHNTAGEHCDQCLPGHFGDP 897
>gi|339249948|ref|XP_003373959.1| putative laminin B [Trichinella spiralis]
gi|316969859|gb|EFV53899.1| putative laminin B [Trichinella spiralis]
Length = 1616
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 33 QTCNCNNHARKCRFNMELYK--LSGRSSG-----GVCLQCRHFTAGRHCHYCKEGYYRDP 85
+ C C NHA +CR++ E+ K LS G GVC+ C+H T G +C CK+ +YR
Sbjct: 218 EPCQCFNHATECRYDPEVEKQHLSLTPEGIYEGGGVCIDCKHNTQGINCQECKDFFYRPT 277
Query: 86 SRPITHRKACKK 97
+ + C+
Sbjct: 278 GVSVYDQNTCQP 289
>gi|395530958|ref|XP_003767551.1| PREDICTED: laminin subunit gamma-1, partial [Sarcophilus harrisii]
Length = 1535
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYR 83
CNCN +++C F+ ELY+ +G GG C C+ T G +C C+E +YR
Sbjct: 285 CNCNGRSQECYFDPELYRSTGH--GGHCTNCQDNTDGANCERCRENFYR 331
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 12/50 (24%)
Query: 35 CNCNNHARKCRFNMELYKLSGRSSGGVCLQCRHFTAGRHCHYCKEGYYRD 84
C CN H+ C GVC CR TAG HC C +GYY D
Sbjct: 667 CTCNGHSETCD-----------PETGVC-NCRDNTAGPHCEKCVDGYYGD 704
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.138 0.468
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,628,898,157
Number of Sequences: 23463169
Number of extensions: 54802905
Number of successful extensions: 145761
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1794
Number of HSP's successfully gapped in prelim test: 324
Number of HSP's that attempted gapping in prelim test: 131811
Number of HSP's gapped (non-prelim): 12355
length of query: 98
length of database: 8,064,228,071
effective HSP length: 67
effective length of query: 31
effective length of database: 6,492,195,748
effective search space: 201258068188
effective search space used: 201258068188
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 69 (31.2 bits)