BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12863
(150 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7KVA1|XYLT_DROME Xylosyltransferase oxt OS=Drosophila melanogaster GN=oxt PE=2 SV=1
Length = 876
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 67/79 (84%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VLRN+ HC SY+DNNLH+TNWKR GCKCQY+HVVDWCGCSPNDF+ D+ RL AT+ K
Sbjct: 458 VLRNTKHCTSYVDNNLHVTNWKRKQGCKCQYKHVVDWCGCSPNDFKPEDWPRLQATEQKS 517
Query: 63 LYFARKFEPVVNQDIHLEV 81
L+FARKFEPV+NQ + L++
Sbjct: 518 LFFARKFEPVINQAVLLQL 536
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 18/115 (15%)
Query: 54 RLVATKGKQLYFARKFEPVVNQDI-----------HLEVSSSYDQKEQMSRDFLHAIGPY 102
R + GK L+ + P + + EVS+ +DQKEQ++R+F +GP
Sbjct: 614 RARGSTGKPLHLETRVRPTQQGKLARNARFSKRLRNFEVSTDFDQKEQIARNFGKLLGPQ 673
Query: 103 SEPVLIHEWLTLV-------THNITYLWIDPTNVLAAVTRVQVDENTTSITQSSQ 150
S+ +L + ++N+T LWIDP L + V+++T+ + S+
Sbjct: 674 SDLLLSYTLQANADSGAASHSYNLTLLWIDPLGRLQDFNELHVEDSTSDVINHSK 728
>sp|Q5QQ53|XYLT_DROPS Xylosyltransferase oxt OS=Drosophila pseudoobscura pseudoobscura
GN=oxt PE=2 SV=1
Length = 880
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 67/79 (84%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VLRN+ HC +Y+DNNLH+TNWKR GCKCQY+HVVDWCGCSPNDF D+ RL+AT+ K
Sbjct: 462 VLRNTHHCHTYVDNNLHVTNWKRKQGCKCQYKHVVDWCGCSPNDFMPDDWPRLLATEQKS 521
Query: 63 LYFARKFEPVVNQDIHLEV 81
L+FARKFEP++NQ + L++
Sbjct: 522 LFFARKFEPIINQAVLLQL 540
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 78 HLEVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLV-------THNITYLWIDPTNVL 130
+ EVS+ +DQKEQ++R+F +GP S+ VL + + ++N+T LWIDP L
Sbjct: 653 NFEVSTDFDQKEQVARNFGKLLGPQSDLVLSYTYQGSTDSGAASHSYNLTLLWIDPLGRL 712
Query: 131 AAVTRVQVDENTTSITQSSQ 150
+ V++++T + S+
Sbjct: 713 QDFNELHVEDSSTDLINHSK 732
>sp|Q5QQ56|XYLT1_CANFA Xylosyltransferase 1 OS=Canis familiaris GN=XYLT1 PE=2 SV=1
Length = 950
Score = 115 bits (287), Expect = 1e-25, Method: Composition-based stats.
Identities = 48/75 (64%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VL NS HC + +DNNL ITNW R LGCKCQY+H+VDWCGCSPNDF+ D+ R T +
Sbjct: 524 VLENSPHCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQT-ARP 582
Query: 63 LYFARKFEPVVNQDI 77
+FARKFE VVNQ+I
Sbjct: 583 TFFARKFEAVVNQEI 597
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 79 LEVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAVTRVQV 138
+ V + +D KE++ R+F +GP EPV + +W +T +W+DP N++AA + +
Sbjct: 731 VRVGTDWDAKERLFRNFGGLLGPMDEPVGMQKWGKGPNVTVTVIWVDPVNIIAATYDILI 790
Query: 139 DENTTSITQ 147
E+T T
Sbjct: 791 -ESTAEFTH 798
>sp|Q86Y38|XYLT1_HUMAN Xylosyltransferase 1 OS=Homo sapiens GN=XYLT1 PE=1 SV=1
Length = 959
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VL NS HC + +DNNL ITNW R LGCKCQY+H+VDWCGCSPNDF+ D+ R T +
Sbjct: 535 VLENSPHCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQT-ARP 593
Query: 63 LYFARKFEPVVNQDI 77
+FARKFE VVNQ+I
Sbjct: 594 TFFARKFEAVVNQEI 608
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 80 EVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAVTRVQVD 139
EV + +D KE++ R+F +GP EPV + +W +T +W+DP NV+AA + +
Sbjct: 741 EVGTDWDAKERLFRNFGGLLGPMDEPVGMQKWGKGPNVTVTVIWVDPVNVIAATYDILI- 799
Query: 140 ENTTSIT 146
E+T T
Sbjct: 800 ESTAEFT 806
>sp|Q5QQ57|XYLT1_PANTR Xylosyltransferase 1 OS=Pan troglodytes GN=XYLT1 PE=2 SV=1
Length = 945
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VL NS HC + +DNNL ITNW R LGCKCQY+H+VDWCGCSPNDF+ D+ R T +
Sbjct: 521 VLENSPHCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQT-ARP 579
Query: 63 LYFARKFEPVVNQDI 77
+FARKFE VVNQ+I
Sbjct: 580 TFFARKFEAVVNQEI 594
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 80 EVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAVTRVQVD 139
EV + +D KE++ R+F +GP EPV + +W +T +W+DP NV+AA + +
Sbjct: 727 EVGTDWDAKERLFRNFGGLLGPMDEPVGMQKWGKGPNVTVTVIWVDPVNVIAATYDILI- 785
Query: 140 ENTTSIT 146
E+T T
Sbjct: 786 ESTAEFT 792
>sp|Q811B1|XYLT1_MOUSE Xylosyltransferase 1 OS=Mus musculus GN=Xylt1 PE=2 SV=1
Length = 953
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VL NS HC + +DNNL ITNW R LGCKCQY+H+VDWCGCSPNDF+ D+ R T +
Sbjct: 529 VLENSPHCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQT-ARP 587
Query: 63 LYFARKFEPVVNQDIHLEVSS 83
+FARKFE +VNQ+I ++ S
Sbjct: 588 TFFARKFEAIVNQEIIGQLDS 608
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 80 EVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAVTRVQVD 139
EV + +D KE++ R+F +GP EPV + +W +T +W+DP NV+ A + +
Sbjct: 735 EVGTDWDAKERLFRNFGGLLGPMDEPVGMQKWGKGPNVTVTVIWVDPVNVITATYDILI- 793
Query: 140 ENTTSIT 146
E+T T
Sbjct: 794 ESTAEFT 800
>sp|Q9EPI1|XYLT1_RAT Xylosyltransferase 1 (Fragment) OS=Rattus norvegicus GN=Xylt1 PE=2
SV=1
Length = 821
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VL NS HC + +DNNL ITNW R LGCKCQY+H+VDWCGCSPNDF+ D+ R T +
Sbjct: 400 VLENSPHCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQT-ARP 458
Query: 63 LYFARKFEPVVNQDIHLEVSS 83
+FARKFE +VNQ+I ++ S
Sbjct: 459 TFFARKFEAIVNQEIIGQLDS 479
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 80 EVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAVTRVQVD 139
EV + +D KE++ R+F +GP EPV + +W +T +W+DP NV+AA + +
Sbjct: 606 EVGTDWDAKERLFRNFGGLLGPMDEPVGMQKWGKGPNVTVTVIWVDPVNVIAATYDILI- 664
Query: 140 ENTTSIT 146
E+T T
Sbjct: 665 ESTAEFT 671
>sp|Q9EPL0|XYLT2_MOUSE Xylosyltransferase 2 OS=Mus musculus GN=Xylt2 PE=2 SV=3
Length = 865
Score = 110 bits (274), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/110 (50%), Positives = 67/110 (60%), Gaps = 14/110 (12%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VL NS C S +DNNL +TNW R LGCKCQY+H+VDWCGCSPNDF+ D+ RL +
Sbjct: 441 VLENSPACASLVDNNLRVTNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFLRLQQVS-RP 499
Query: 63 LYFARKFEPVVNQDIHLEVSSSYDQKEQMSRDF-LHAIGPYSEPVLIHEW 111
+FARKFE VNQ++ LE+ DF L+ P S P L W
Sbjct: 500 TFFARKFESTVNQEV-LEI-----------LDFHLYGSYPPSTPALKAYW 537
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 79 LEVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAVTRVQV 138
LEV + +D KE++ R+F +GP EPV + W T +WIDPT V+A + V
Sbjct: 646 LEVGTEWDPKERLFRNFGGLLGPLDEPVAMQRWARGPNLTATVVWIDPTYVVATSYDITV 705
Query: 139 DENTTSITQ 147
D + T +TQ
Sbjct: 706 DAD-TEVTQ 713
>sp|Q5QQ50|XYLT2_CANFA Xylosyltransferase 2 OS=Canis familiaris GN=XYLT2 PE=2 SV=1
Length = 865
Score = 109 bits (273), Expect = 5e-24, Method: Composition-based stats.
Identities = 47/79 (59%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VL NS C S +DNNL +TNW R LGCKCQY+H+VDWCGCSPNDF+ D+ RL +
Sbjct: 441 VLENSPACESLVDNNLRVTNWNRRLGCKCQYKHIVDWCGCSPNDFKPQDFLRLQQVS-RP 499
Query: 63 LYFARKFEPVVNQDIHLEV 81
+FARKFE VNQ++ LE+
Sbjct: 500 TFFARKFESTVNQEV-LEI 517
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 79 LEVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAVTRVQV 138
LEV + +D KE++ R+F +GP EPV + W T +WIDPT V+A + V
Sbjct: 646 LEVGTEWDPKERLFRNFGGLLGPLDEPVAMQRWARGPNLTATVVWIDPTYVVATSYDIAV 705
Query: 139 DENTTSITQ 147
D + T +TQ
Sbjct: 706 DAD-TEVTQ 713
>sp|Q5QQ51|XYLT2_PANTR Xylosyltransferase 2 OS=Pan troglodytes GN=XYLT2 PE=2 SV=1
Length = 865
Score = 109 bits (273), Expect = 5e-24, Method: Composition-based stats.
Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VL NS+ C + +DNNL +TNW R LGCKCQY+H+VDWCGCSPNDF+ D+ RL +
Sbjct: 441 VLENSLACETLVDNNLRVTNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFLRLQQVS-RP 499
Query: 63 LYFARKFEPVVNQDIHLEV 81
+FARKFE VNQ++ LE+
Sbjct: 500 TFFARKFESTVNQEV-LEI 517
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 79 LEVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAVTRVQV 138
LEV + +D KE++ R+F +GP EPV + W T +WIDPT V+A + V
Sbjct: 646 LEVGTDWDPKERLFRNFGGLLGPLDEPVAVQRWARGPNLTATVVWIDPTYVVATSYDITV 705
Query: 139 DENTTSITQ 147
D T +TQ
Sbjct: 706 D-TETEVTQ 713
>sp|Q9H1B5|XYLT2_HUMAN Xylosyltransferase 2 OS=Homo sapiens GN=XYLT2 PE=2 SV=2
Length = 865
Score = 109 bits (273), Expect = 5e-24, Method: Composition-based stats.
Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VL NS+ C + +DNNL +TNW R LGCKCQY+H+VDWCGCSPNDF+ D+ RL +
Sbjct: 441 VLENSLACETLVDNNLRVTNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFLRLQQVS-RP 499
Query: 63 LYFARKFEPVVNQDIHLEV 81
+FARKFE VNQ++ LE+
Sbjct: 500 TFFARKFESTVNQEV-LEI 517
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 79 LEVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAVTRVQV 138
LEV + +D KE++ R+F +GP EPV + W T +WIDPT V+A + V
Sbjct: 646 LEVGTDWDPKERLFRNFGGLLGPLDEPVAVQRWARGPNLTATVVWIDPTYVVATSYDITV 705
Query: 139 DENTTSITQ 147
D T +TQ
Sbjct: 706 D-TETEVTQ 713
>sp|Q9EPI0|XYLT2_RAT Xylosyltransferase 2 OS=Rattus norvegicus GN=Xylt2 PE=2 SV=1
Length = 864
Score = 108 bits (271), Expect = 8e-24, Method: Composition-based stats.
Identities = 47/79 (59%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VL NS C S +DNNL +TNW R LGCKCQY+H+VDWCGCSPNDF+ D+ RL +
Sbjct: 441 VLENSPACESLVDNNLRVTNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFLRLQQVS-RP 499
Query: 63 LYFARKFEPVVNQDIHLEV 81
+FARKFE VNQ++ LE+
Sbjct: 500 TFFARKFESTVNQEV-LEI 517
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 79 LEVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAVTRVQV 138
LEV + +D KE++ R+F +GP EPV + W T +WIDPT V+A + V
Sbjct: 645 LEVGTEWDPKERLFRNFGGLLGPLDEPVAMQRWARGPNLTATVVWIDPTYVVATSYDITV 704
Query: 139 DENTTSITQ 147
D + T +TQ
Sbjct: 705 DAD-TEVTQ 712
>sp|Q5QQ54|XYLT_CIOSA Xylosyltransferase OS=Ciona savignyi GN=xt PE=2 SV=1
Length = 843
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
+++NS C S++DNNL +TNW R+ GCKCQY+H+VDWCGCSPNDF +D RL + +
Sbjct: 418 LVQNSDMCESFVDNNLRVTNWNRARGCKCQYKHIVDWCGCSPNDFYPADLVRLHTS--RP 475
Query: 63 LYFARKFEPVVNQDI 77
++FARKFE +NQ++
Sbjct: 476 VFFARKFEESINQEV 490
>sp|Q5QQ55|XYLT_CIOIN Xylosyltransferase OS=Ciona intestinalis GN=xt PE=2 SV=1
Length = 848
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 61/80 (76%), Gaps = 4/80 (5%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
+++NS C +++DNN+ +TNW R+ GCKCQY+H+VDWCGCSPNDF SD RL + +
Sbjct: 420 LVQNSDLCETFVDNNIRVTNWNRARGCKCQYKHIVDWCGCSPNDFYPSDLVRLRTS--RP 477
Query: 63 LYFARKFEPVVNQDI--HLE 80
++FARKFE +NQ++ HL+
Sbjct: 478 VFFARKFEESINQEVVNHLD 497
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 81 VSSSYDQKEQMSRDFLHAIGPYSEPVLIHEW-LTLVTHNITYLWIDPTNVLAAVTRVQVD 139
V +++D KE + RD+ +GP S+ L+ W + +T + IDP NV+A +
Sbjct: 608 VGTNWDVKELVIRDWGGLVGPNSDVHLVARWSRSEDDFVVTVVVIDPLNVVADYNDFRTP 667
Query: 140 ENTTSITQS 148
+T++
Sbjct: 668 SKAAGVTET 676
>sp|Q5QQ49|XYLT2_BOVIN Xylosyltransferase 2 OS=Bos taurus GN=XYLT2 PE=2 SV=1
Length = 867
Score = 98.2 bits (243), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VL S C S +DNN+ +T W R +G K QY+H+VDWCGCSPNDF+ D+ RL T +
Sbjct: 440 VLEISPACESLVDNNMRVTTWNRKMGSKSQYKHIVDWCGCSPNDFKPQDFLRLQQT-ARP 498
Query: 63 LYFARKFEPVVNQDI 77
+FARKFE VVNQ+I
Sbjct: 499 TFFARKFEAVVNQEI 513
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 80 EVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAVTRVQVD 139
+V + +D KE++ R+F +GP EPV + W +T +WIDPT V+A + VD
Sbjct: 649 QVGTEWDPKERLFRNFGGLLGPLDEPVAMQRWARGPNLTVTVVWIDPTYVVATSYDIVVD 708
Query: 140 ENTTSITQ 147
T +TQ
Sbjct: 709 AE-TEVTQ 715
>sp|Q965Q8|XYLT_CAEEL Xylosyltransferase sqv-6 OS=Caenorhabditis elegans GN=sqv-6 PE=1
SV=3
Length = 806
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 6 NSVHCFSYIDNNLHITNWKRSLGCKC-QYRHVVDWCGCSPNDFRSSDYSRLVATKG--KQ 62
NS C + +NL +TNW R GC+C + +VDWCGCSP FR + K K
Sbjct: 441 NSEFCDDLLMSNLRLTNWYRKQGCRCASLKPIVDWCGCSPLVFREETMKKFELQKAISKP 500
Query: 63 LYFARKFEPVVNQD 76
YFARKF+ +V+ D
Sbjct: 501 TYFARKFDSMVDID 514
>sp|Q5QQ52|XYLT_CAEBR Xylosyltransferase sqv-6 OS=Caenorhabditis briggsae GN=sqv-6 PE=2
SV=1
Length = 803
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 6 NSVHCFSYIDNNLHITNWKRSLGCKC-QYRHVVDWCGCSPNDFRSSDYSRLVATKG--KQ 62
NS C + +NL +TNW R GC+C + +VDWCGCSP FR + K K
Sbjct: 442 NSKFCDDLMMSNLRLTNWLRKQGCRCASLKQIVDWCGCSPLVFREDTKIKFEMQKAISKP 501
Query: 63 LYFARKFEPVVN 74
YFARKF+ +V+
Sbjct: 502 TYFARKFDSMVD 513
>sp|Q925X2|Y1244_LISIN Uncharacterized phage-related protein Lin1244/Lin1753 OS=Listeria
innocua serovar 6a (strain CLIP 11262) GN=lin1244 PE=4
SV=1
Length = 305
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 79 LEVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAVTRVQV 138
L+V + YD K Q+ + LH GP ++I ++ + + N Y W + +L A RV V
Sbjct: 14 LDVDADYDDKFQLI-ETLH--GPTGFAIMIKLFMKIYSQNFYYKWTETEQILFA-KRVNV 69
Query: 139 DENT 142
D NT
Sbjct: 70 DINT 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,997,948
Number of Sequences: 539616
Number of extensions: 1972223
Number of successful extensions: 4019
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3961
Number of HSP's gapped (non-prelim): 42
length of query: 150
length of database: 191,569,459
effective HSP length: 107
effective length of query: 43
effective length of database: 133,830,547
effective search space: 5754713521
effective search space used: 5754713521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)