RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12865
(227 letters)
>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein
TRIO {Human (Homo sapiens) [TaxId: 9606]}
Length = 121
Score = 62.3 bits (151), Expect = 2e-13
Identities = 41/59 (69%), Positives = 49/59 (83%)
Query: 2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
K +L TSELGVTEH+EGD CKFA+W GR P SD +I+LKASS+E KQ W+K +REVIQE
Sbjct: 61 KSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 119
Score = 33.0 bits (75), Expect = 0.008
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 74 KSPAKLKSRSNQPNMEDEDNCDRGSLASYGSGNTTDSDKASSLEAKQLWVKRLREVIQE 132
KS ++E + + + + KASS+E KQ W+K +REVIQE
Sbjct: 61 KSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 119
Score = 30.3 bits (68), Expect = 0.071
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 150 SASSLEAKQLWVKRLREVIQE 170
ASS+E KQ W+K +REVIQE
Sbjct: 99 KASSIENKQDWIKHIREVIQE 119
>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 119
Score = 61.5 bits (149), Expect = 5e-13
Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLK--ASSLEAKQLWVKRLREVI 58
+ + + +H DE + + RI K +S ++ W++ + E
Sbjct: 53 HYSSIRLDKYNIRQH-TTDEDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQ 111
Query: 59 QE 60
++
Sbjct: 112 EK 113
Score = 29.5 bits (66), Expect = 0.14
Identities = 3/22 (13%), Positives = 11/22 (50%)
Query: 149 ASASSLEAKQLWVKRLREVIQE 170
+S ++ W++ + E ++
Sbjct: 92 DFETSEYVRKAWLRDIAEEQEK 113
Score = 27.9 bits (62), Expect = 0.41
Identities = 3/20 (15%), Positives = 11/20 (55%)
Query: 113 ASSLEAKQLWVKRLREVIQE 132
+S ++ W++ + E ++
Sbjct: 94 ETSEYVRKAWLRDIAEEQEK 113
>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 147
Score = 53.2 bits (127), Expect = 9e-10
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
K L + +G+TE+++GD KF +W +++A + E K WV +R+V+
Sbjct: 74 KQSLNMTAVGITENVKGDTKKFEIWYNAREEV---YIIQAPTPEIKAAWVNAIRKVLTS 129
>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange
factor 12 {Human (Homo sapiens), gamma isoform [TaxId:
9606]}
Length = 114
Score = 46.2 bits (109), Expect = 2e-07
Identities = 7/58 (12%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Query: 2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ 59
+ S + V + ++ F + L A ++ K +W + +
Sbjct: 58 SPVIKLSTVLVRQVATDNKALFVISMSDNGAQ--IYELVAQTVSEKTVWQDLICRMAA 113
Score = 25.4 bits (55), Expect = 3.9
Identities = 3/20 (15%), Positives = 8/20 (40%)
Query: 112 KASSLEAKQLWVKRLREVIQ 131
A ++ K +W + +
Sbjct: 94 VAQTVSEKTVWQDLICRMAA 113
Score = 24.6 bits (53), Expect = 5.9
Identities = 3/19 (15%), Positives = 8/19 (42%)
Query: 151 ASSLEAKQLWVKRLREVIQ 169
A ++ K +W + +
Sbjct: 95 AQTVSEKTVWQDLICRMAA 113
>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 132
Score = 40.9 bits (95), Expect = 2e-05
Identities = 9/64 (14%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
+G++ + + V E + + + RI++ ++ + Q W+++L + +
Sbjct: 70 YQGKIPIAGMVVNRLDEIEGSDCMFEITGSTVE--RIVVHCNNNQDFQEWMEQLNRLTKS 127
Query: 61 TYFS 64
S
Sbjct: 128 GPSS 131
Score = 32.8 bits (74), Expect = 0.011
Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 13/129 (10%)
Query: 13 TEHIEGDECKFAVWTGRAPISDCRILLKASSLEAK--QLWVKRLREVI---QETYFSSAL 67
+E I+ W G I ++ S + + K R + SA
Sbjct: 11 SEPIQA-------WEGD-DIKTLGNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSAS 62
Query: 68 PLAAPPKSPAKLKSRSNQPNMEDEDNCDRGSLASYGSGNTTDSDKASSLEAKQLWVKRLR 127
P + K+ N DE GS ++ + Q W+++L
Sbjct: 63 PRMSGFMYQGKIPIAGMVVNRLDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLN 122
Query: 128 EVIQETYFS 136
+ + S
Sbjct: 123 RLTKSGPSS 131
Score = 30.1 bits (67), Expect = 0.088
Identities = 4/25 (16%), Positives = 12/25 (48%)
Query: 150 SASSLEAKQLWVKRLREVIQETYFS 174
++ + Q W+++L + + S
Sbjct: 107 HCNNNQDFQEWMEQLNRLTKSGPSS 131
>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange
factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId:
9606]}
Length = 140
Score = 40.8 bits (95), Expect = 2e-05
Identities = 8/55 (14%), Positives = 19/55 (34%)
Query: 5 LMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ 59
++ + + D+ F + L A + K W++ L E ++
Sbjct: 84 VLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR 138
Score = 25.8 bits (56), Expect = 2.8
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 150 SASSLEAKQLWVKRLREVIQ 169
A + K W++ L E ++
Sbjct: 119 VALTSSDKNTWMELLEEAVR 138
Score = 25.8 bits (56), Expect = 3.2
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 112 KASSLEAKQLWVKRLREVIQ 131
A + K W++ L E ++
Sbjct: 119 VALTSSDKNTWMELLEEAVR 138
>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 38.5 bits (89), Expect = 1e-04
Identities = 10/59 (16%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 1 MKGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ 59
+K + ++ + + + +E K A + ++ A S E K W+ L +
Sbjct: 73 LKEKFFMRKVQINDKDDTNEYKHAFEI--ILKDENSVIFSAKSAEEKNNWMAALISLQY 129
Score = 26.2 bits (57), Expect = 2.4
Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 4/58 (6%)
Query: 78 KLKSRSNQPNMEDEDNCDRGSLASYGSGNTTDSDK----ASSLEAKQLWVKRLREVIQ 131
+LK + ++ D D D + A S E K W+ L +
Sbjct: 72 RLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQY 129
Score = 24.7 bits (53), Expect = 8.3
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 150 SASSLEAKQLWVKRLREVIQ 169
SA S E K W+ L +
Sbjct: 110 SAKSAEEKNNWMAALISLQY 129
>d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 142
Score = 36.7 bits (84), Expect = 6e-04
Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Query: 2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQE 60
K + +E+ V + + D L+A S+ + WV++++ +
Sbjct: 78 KTPIFLNEVLVKLPTDPSGDEPIFHISH---IDRVYTLRAESINERTAWVQKIKAASEL 133
Score = 26.7 bits (58), Expect = 1.4
Identities = 4/45 (8%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Query: 127 REVIQETYFSSALPLAAPPKS-PASASSLEAKQLWVKRLREVIQE 170
+ + ++ + A S+ + WV++++ +
Sbjct: 89 KLPTDPSGDEPIFHISHIDRVYTLRAESINERTAWVQKIKAASEL 133
Score = 25.5 bits (55), Expect = 3.7
Identities = 4/20 (20%), Positives = 11/20 (55%)
Query: 113 ASSLEAKQLWVKRLREVIQE 132
A S+ + WV++++ +
Sbjct: 114 AESINERTAWVQKIKAASEL 133
>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase
C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 101
Score = 27.3 bits (59), Expect = 0.67
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 13 TEHIEGDECKFAVWTGRAPISDCRIL-LKASSLEAKQLWVKRLREVIQ 59
EG + V++ P L + A S E Q WVK++REV Q
Sbjct: 52 AIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 99
Score = 25.0 bits (53), Expect = 3.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 150 SASSLEAKQLWVKRLREVIQ 169
+A S E Q WVK++REV Q
Sbjct: 80 AADSQEELQDWVKKIREVAQ 99
Score = 24.6 bits (52), Expect = 5.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 112 KASSLEAKQLWVKRLREVIQ 131
A S E Q WVK++REV Q
Sbjct: 80 AADSQEELQDWVKKIREVAQ 99
>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 27.2 bits (59), Expect = 0.71
Identities = 6/48 (12%), Positives = 19/48 (39%)
Query: 12 VTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ 59
V + G + + + L+A++ + + W+K ++ +
Sbjct: 57 VESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASR 104
Score = 24.5 bits (52), Expect = 7.3
Identities = 3/20 (15%), Positives = 11/20 (55%)
Query: 150 SASSLEAKQLWVKRLREVIQ 169
A++ + + W+K ++ +
Sbjct: 85 QAATPKERTEWIKAIQMASR 104
Score = 24.1 bits (51), Expect = 7.7
Identities = 3/20 (15%), Positives = 12/20 (60%)
Query: 112 KASSLEAKQLWVKRLREVIQ 131
+A++ + + W+K ++ +
Sbjct: 85 QAATPKERTEWIKAIQMASR 104
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 113
Score = 27.2 bits (59), Expect = 0.72
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 33 SDCRILLKASSLEAKQLWVKRLREVIQ 59
+A+ LE + WV+ + + I+
Sbjct: 75 KQQDHFFQAAFLEERDAWVRDINKAIK 101
>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 111
Score = 27.2 bits (59), Expect = 0.79
Identities = 6/23 (26%), Positives = 14/23 (60%)
Query: 37 ILLKASSLEAKQLWVKRLREVIQ 59
A+S + + WV++L+ ++Q
Sbjct: 89 YQFTAASPKDAEEWVQQLKFILQ 111
Score = 25.3 bits (54), Expect = 3.7
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 112 KASSLEAKQLWVKRLREVIQ 131
A+S + + WV++L+ ++Q
Sbjct: 92 TAASPKDAEEWVQQLKFILQ 111
Score = 25.3 bits (54), Expect = 3.8
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 150 SASSLEAKQLWVKRLREVIQ 169
+A+S + + WV++L+ ++Q
Sbjct: 92 TAASPKDAEEWVQQLKFILQ 111
>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 117
Score = 27.3 bits (59), Expect = 0.82
Identities = 5/27 (18%), Positives = 11/27 (40%)
Query: 33 SDCRILLKASSLEAKQLWVKRLREVIQ 59
+ A + + Q WV R++ +
Sbjct: 85 TRRVYNFCAQDVPSAQQWVDRIQSCLS 111
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein
SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 27.1 bits (59), Expect = 0.89
Identities = 4/24 (16%), Positives = 12/24 (50%)
Query: 37 ILLKASSLEAKQLWVKRLREVIQE 60
A+S + WV ++ ++++
Sbjct: 81 YEFTATSPAEARDWVDQISFLLKD 104
Score = 24.8 bits (53), Expect = 5.0
Identities = 4/21 (19%), Positives = 12/21 (57%)
Query: 112 KASSLEAKQLWVKRLREVIQE 132
A+S + WV ++ ++++
Sbjct: 84 TATSPAEARDWVDQISFLLKD 104
Score = 24.8 bits (53), Expect = 5.5
Identities = 4/21 (19%), Positives = 13/21 (61%)
Query: 150 SASSLEAKQLWVKRLREVIQE 170
+A+S + WV ++ ++++
Sbjct: 84 TATSPAEARDWVDQISFLLKD 104
>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and
3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 26.6 bits (58), Expect = 1.3
Identities = 8/44 (18%), Positives = 14/44 (31%)
Query: 15 HIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVI 58
++ D + V L A + W+K LR +
Sbjct: 54 AVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKL 97
Score = 24.3 bits (52), Expect = 7.8
Identities = 7/44 (15%), Positives = 16/44 (36%)
Query: 87 NMEDEDNCDRGSLASYGSGNTTDSDKASSLEAKQLWVKRLREVI 130
++ + + +R + T A + W+K LR +
Sbjct: 54 AVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKL 97
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 209
Score = 27.2 bits (59), Expect = 1.5
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 37 ILLKASSLEAKQLWVKRLREVIQE 60
A+S + + WV++L+ ++Q+
Sbjct: 184 YQFTAASPKDAEEWVQQLKFILQD 207
Score = 25.3 bits (54), Expect = 6.2
Identities = 6/21 (28%), Positives = 15/21 (71%)
Query: 112 KASSLEAKQLWVKRLREVIQE 132
A+S + + WV++L+ ++Q+
Sbjct: 187 TAASPKDAEEWVQQLKFILQD 207
Score = 24.9 bits (53), Expect = 7.1
Identities = 6/21 (28%), Positives = 16/21 (76%)
Query: 150 SASSLEAKQLWVKRLREVIQE 170
+A+S + + WV++L+ ++Q+
Sbjct: 187 TAASPKDAEEWVQQLKFILQD 207
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding
protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 26.0 bits (56), Expect = 1.8
Identities = 8/58 (13%), Positives = 17/58 (29%)
Query: 2 KGRLMTSELGVTEHIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREVIQ 59
G ++ + G +L A +LE + W++ L +
Sbjct: 50 LGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASR 107
Score = 24.9 bits (53), Expect = 5.0
Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 1/102 (0%)
Query: 30 APISDCRILLKASSLEAKQLWVKRLREVIQETYFSSALPLAAPPKSPAKLKSRSNQPNME 89
P+ L K S + W +R + F L S + +P+
Sbjct: 7 LPVHIRGWLHKQDSSGLRL-WKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGP 65
Query: 90 DEDNCDRGSLASYGSGNTTDSDKASSLEAKQLWVKRLREVIQ 131
R + + G T A +LE + W++ L +
Sbjct: 66 GAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASR 107
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 25.9 bits (56), Expect = 1.8
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 33 SDCRILLKASSLEAKQLWVKRLREVIQE 60
+ ++A S E W+K + I
Sbjct: 74 TSRTFYVQADSPEEMHSWIKAVSGAIVA 101
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea
seedling (Pisum sativum) [TaxId: 3888]}
Length = 441
Score = 26.9 bits (59), Expect = 2.3
Identities = 9/67 (13%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Query: 136 SSALPLAAPPKSPASASSLEAKQLWVKRLREVIQETYFSSALPLAAPPKSPAKLKSRSNQ 195
A PL P + +WV E + + + ++ N+
Sbjct: 323 IPAHPLLTEDDYPQIRGAFTNYNVWVTAYNR--TEKWAGGLYVDHSRGDDTLAVWTKQNR 380
Query: 196 PNMEDED 202
+ ++D
Sbjct: 381 -EIVNKD 386
>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 25.7 bits (55), Expect = 2.6
Identities = 6/43 (13%), Positives = 12/43 (27%)
Query: 15 HIEGDECKFAVWTGRAPISDCRILLKASSLEAKQLWVKRLREV 57
+I D + A S + W + L ++
Sbjct: 60 NINKRADSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQL 102
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 116
Score = 25.6 bits (55), Expect = 2.7
Identities = 5/25 (20%), Positives = 14/25 (56%)
Query: 33 SDCRILLKASSLEAKQLWVKRLREV 57
D ++ASS + W++ ++++
Sbjct: 91 DDTHYYIQASSKAERAEWIEAIKKL 115
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 127
Score = 26.0 bits (56), Expect = 2.8
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 33 SDCRILLKASSLEAKQLWVKRLREVIQ 59
+ + A S E K+ W+K ++ I
Sbjct: 94 NHVVYRISAPSPEEKEEWMKSIKASIS 120
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 169
Score = 25.6 bits (55), Expect = 4.7
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 72 PPKSPAKLKSRSNQPNMEDEDNCDRGSLASYGSGNTTDSDKASSLEAKQLWVKRLREVIQ 131
PP+ + + + + + E ++ W+ +L+ VI+
Sbjct: 73 PPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIR 132
Score = 24.8 bits (53), Expect = 6.7
Identities = 5/21 (23%), Positives = 14/21 (66%)
Query: 39 LKASSLEAKQLWVKRLREVIQ 59
+ + + E ++ W+ +L+ VI+
Sbjct: 112 VFSPTEELRKRWIHQLKNVIR 132
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 348
Score = 25.2 bits (54), Expect = 7.6
Identities = 8/49 (16%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Query: 124 KRL--REVIQETYFSSALPLAAPPKSPASASSLEAKQLWVKRLREVIQE 170
KR+ + + YF+ P + S E++ L + + + +
Sbjct: 291 KRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYD 339
>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9
{Human (Homo sapiens) [TaxId: 9606]}
Length = 150
Score = 24.7 bits (52), Expect = 9.0
Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 3/87 (3%)
Query: 50 WVKRLREVIQETYFSSALPLAAPPKSPAKLKSRSNQPNM---EDEDNCDRGSLASYGSGN 106
+ +R +IQ S L K + K + + R +
Sbjct: 40 FKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNNKVRRFAFELKMQDK 99
Query: 107 TTDSDKASSLEAKQLWVKRLREVIQET 133
++ A S + W+ L +++Q
Sbjct: 100 SSYLLAADSEVEMEEWITILNKILQLN 126
>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 24.2 bits (51), Expect = 9.1
Identities = 3/24 (12%), Positives = 8/24 (33%)
Query: 36 RILLKASSLEAKQLWVKRLREVIQ 59
+ E ++ W ++ V
Sbjct: 86 ERTFHVETPEEREEWTTAIQTVAD 109
>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 24.3 bits (52), Expect = 9.9
Identities = 7/28 (25%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 35 CRILLKASSLEAKQLWVKRLREVIQETY 62
L S A + W ++++EV ++ Y
Sbjct: 112 RTYYLMDPSGNAHK-WCRKIQEVWRQRY 138
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.310 0.125 0.360
Gapped
Lambda K H
0.267 0.0454 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 755,165
Number of extensions: 31420
Number of successful extensions: 119
Number of sequences better than 10.0: 1
Number of HSP's gapped: 116
Number of HSP's successfully gapped: 59
Length of query: 227
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 145
Effective length of database: 1,281,736
Effective search space: 185851720
Effective search space used: 185851720
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 51 (24.1 bits)