BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy1287
MDDIRINITNFNVEQFSQEELSALINSAAIIYIKQYQDFISKLGAPVVIEHLNSMIKDFT
IMEYSEDKMTKPRSLAGNVGIAVFVIAFFCVVFAFFSASWLVSDSRITGAKFDRLGLWTH
CFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFC
AMLVLLFFLCFTPDHKRFVQLTLVIGSTLTCAGAKFDRLGLWTHCFRSLPDPNDEYIRRF
FVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLVHNDVQLFFQTNT

High Scoring Gene Products

Symbol, full name Information P value
sinu
sinuous
protein from Drosophila melanogaster 9.9e-39
kune
kune-kune
protein from Drosophila melanogaster 3.0e-11
pck
pickel
protein from Drosophila melanogaster 6.4e-06

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy1287
        (292 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0010894 - symbol:sinu "sinuous" species:7227 "Dros...   414  9.9e-39   1
FB|FBgn0033032 - symbol:kune "kune-kune" species:7227 "Dr...   170  3.0e-11   1
FB|FBgn0013720 - symbol:pck "pickel" species:7227 "Drosop...   127  6.4e-06   1


>FB|FBgn0010894 [details] [associations]
            symbol:sinu "sinuous" species:7227 "Drosophila melanogaster"
            [GO:0007424 "open tracheal system development" evidence=IMP]
            [GO:0035151 "regulation of tube size, open tracheal system"
            evidence=IMP] [GO:0005918 "septate junction" evidence=IDA]
            [GO:0019991 "septate junction assembly" evidence=NAS;IMP]
            [GO:0060857 "establishment of glial blood-brain barrier"
            evidence=IMP] EMBL:AE014296 GO:GO:0005918 GO:GO:0060857
            GO:GO:0035151 GO:GO:0019991 GeneTree:ENSGT00530000064720
            RefSeq:NP_001137891.1 UniGene:Dm.2075 STRING:B7Z0C1
            EnsemblMetazoa:FBtr0300070 GeneID:46187 KEGG:dme:Dmel_CG10624
            CTD:46187 FlyBase:FBgn0010894 eggNOG:NOG43347 OMA:MPEHANN
            OrthoDB:EOG47SQWR PhylomeDB:B7Z0C1 GenomeRNAi:46187 NextBio:838778
            Bgee:B7Z0C1 Uniprot:B7Z0C1
        Length = 263

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 76/143 (53%), Positives = 94/143 (65%)

Query:    71 KPRSLAGNVGXXXXXXXXXXXXXXXXXXXWLVSDSRITGAKFDRLGLWTHCFRSLPDPND 130
             K R+L+G+ G                   WLVSD RITGAK DRLGLW HCFRSLPD ND
Sbjct:    30 KRRTLSGSCGVGVFVFAFAFIVIAFATPSWLVSDYRITGAKLDRLGLWVHCFRSLPDVND 89

Query:   131 EYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFYTLTFLATIFCAMLVLLFFLC 190
             +  RRFFVGCRW++DPFT GYD+IRG+L+P F++ T+FFYTL F+  +  A+ VL+F LC
Sbjct:    90 DSQRRFFVGCRWVYDPFTTGYDEIRGFLLPAFMIATQFFYTLAFIGMLVSAIGVLVFILC 149

Query:   191 FTPDHKRFVQLTLVIGSTLTCAG 213
               PD K F+ L   +G  L  AG
Sbjct:   150 AGPDQKHFITLIKSLGYVLLGAG 172

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 48/67 (71%), Positives = 58/67 (86%)

Query:   213 GAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEF 272
             GAK DRLGLW HCFRSLPD ND+  RRFFVGCRW++DPFT GYD+IRG+L+P F++ T+F
Sbjct:    68 GAKLDRLGLWVHCFRSLPDVNDDSQRRFFVGCRWVYDPFTTGYDEIRGFLLPAFMIATQF 127

Query:   273 FYTLTFL 279
             FYTL F+
Sbjct:   128 FYTLAFI 134


>FB|FBgn0033032 [details] [associations]
            symbol:kune "kune-kune" species:7227 "Drosophila
            melanogaster" [GO:0005918 "septate junction" evidence=ISS;IDA]
            [GO:0060857 "establishment of glial blood-brain barrier"
            evidence=IMP] [GO:0035159 "regulation of tube length, open tracheal
            system" evidence=IMP] [GO:0019991 "septate junction assembly"
            evidence=IMP] [GO:0005919 "pleated septate junction" evidence=IDA]
            EMBL:AE013599 GO:GO:0005918 GO:GO:0060857 GO:GO:0019991
            GO:GO:0035159 EMBL:BT128775 RefSeq:NP_610179.2 UniGene:Dm.5791
            STRING:A1Z6H0 EnsemblMetazoa:FBtr0086037 GeneID:35504
            KEGG:dme:Dmel_CG1298 UCSC:CG1298-RA CTD:35504 FlyBase:FBgn0033032
            eggNOG:NOG43094 GeneTree:ENSGT00530000064720 InParanoid:A1Z6H0
            OMA:FQDIHRF OrthoDB:EOG42NGG6 GenomeRNAi:35504 NextBio:793744
            Uniprot:A1Z6H0
        Length = 264

 Score = 170 (64.9 bits), Expect = 3.0e-11, P = 3.0e-11
 Identities = 38/108 (35%), Positives = 57/108 (52%)

Query:   100 WLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLV 159
             WLV+D R+   +F  LGLW  CF +  D +  +    F GC W+F+   + Y  I  +L+
Sbjct:    31 WLVTDGRLQNPRFTNLGLWEVCFNNFQDIH-RFFDNSFNGCLWVFE---EEYYIIHDFLL 86

Query:   160 PGFLVFTEFFYTLTFLATIFCAMLVLLFFLCFTPDHKRFVQLTLVIGS 207
             PGF +  + F TL F+  +    L + F L  + D  R++ L L IGS
Sbjct:    87 PGFYISVQLFATLCFVMCLVVIPLTVAF-LRTSRDDDRYMVLLLAIGS 133

 Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
 Identities = 23/66 (34%), Positives = 36/66 (54%)

Query:   215 KFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFFY 274
             +F  LGLW  CF +  D +  +    F GC W+F+   + Y  I  +L+PGF +  + F 
Sbjct:    42 RFTNLGLWEVCFNNFQDIH-RFFDNSFNGCLWVFE---EEYYIIHDFLLPGFYISVQLFA 97

Query:   275 TLTFLV 280
             TL F++
Sbjct:    98 TLCFVM 103


>FB|FBgn0013720 [details] [associations]
            symbol:pck "pickel" species:7227 "Drosophila melanogaster"
            [GO:0007424 "open tracheal system development" evidence=IMP]
            [GO:0035151 "regulation of tube size, open tracheal system"
            evidence=IMP] [GO:0019991 "septate junction assembly" evidence=IMP]
            [GO:0005918 "septate junction" evidence=ISS] [GO:0060857
            "establishment of glial blood-brain barrier" evidence=IMP]
            GO:GO:0005918 GO:GO:0060857 GO:GO:0035151 GO:GO:0019991
            EMBL:AE014298 EMBL:AL031027 GeneTree:ENSGT00530000064720 PIR:T13597
            RefSeq:NP_569919.2 RefSeq:NP_726742.1 UniGene:Dm.13 DIP:DIP-21943N
            IntAct:O76899 MINT:MINT-919954 STRING:O76899
            EnsemblMetazoa:FBtr0070255 EnsemblMetazoa:FBtr0070256 GeneID:31101
            KEGG:dme:Dmel_CG14779 UCSC:CG14779-RA CTD:31101 FlyBase:FBgn0013720
            eggNOG:NOG47140 InParanoid:O76899 OMA:RRDWLMY OrthoDB:EOG4CVDQ1
            GenomeRNAi:31101 NextBio:771938 Uniprot:O76899
        Length = 256

 Score = 127 (49.8 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 29/86 (33%), Positives = 48/86 (55%)

Query:   100 WLVSDSRITGAKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLV 159
             W+ S    T A F  +GLW +CF+    P   ++++F  GC  IF   +  Y  IR YL+
Sbjct:    52 WIESYEE-TRASFKNMGLWQYCFKDFVYPKYAFLKQF-TGCHNIF---SHEYYVIREYLL 106

Query:   160 PGFLVFTEFFYTLTFLATIFCAMLVL 185
             PG+L+  + F T++F+  +F  + +L
Sbjct:   107 PGWLMAVQGFVTMSFII-VFLVLALL 131

 Score = 120 (47.3 bits), Expect = 4.4e-05, P = 4.4e-05
 Identities = 24/67 (35%), Positives = 40/67 (59%)

Query:   214 AKFDRLGLWTHCFRSLPDPNDEYIRRFFVGCRWIFDPFTKGYDQIRGYLVPGFLVFTEFF 273
             A F  +GLW +CF+    P   ++++F  GC  IF   +  Y  IR YL+PG+L+  + F
Sbjct:    61 ASFKNMGLWQYCFKDFVYPKYAFLKQF-TGCHNIF---SHEYYVIREYLLPGWLMAVQGF 116

Query:   274 YTLTFLV 280
              T++F++
Sbjct:   117 VTMSFII 123


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.332   0.146   0.477    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      292       273    0.0010  114 3  11 21  0.36    33
                                                     32  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  202 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  19.45u 0.10s 19.55t   Elapsed:  00:00:12
  Total cpu time:  19.45u 0.10s 19.55t   Elapsed:  00:00:13
  Start:  Thu Aug 15 13:41:50 2013   End:  Thu Aug 15 13:42:03 2013

Back to top