Query psy12877
Match_columns 814
No_of_seqs 504 out of 3907
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 22:02:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12877.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12877hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dd5_A Acetyl-COA acetyltransf 100.0 4E-57 1.4E-61 507.1 29.6 334 2-353 59-396 (396)
2 1ulq_A Putative acetyl-COA ace 100.0 7.7E-57 2.6E-61 505.8 28.3 334 2-353 54-399 (401)
3 1wl4_A Acetyl-coenzyme A acety 100.0 1.3E-56 4.4E-61 503.4 29.4 335 2-353 58-396 (397)
4 3goa_A 3-ketoacyl-COA thiolase 100.0 1.5E-56 5.2E-61 500.6 29.4 325 2-353 56-386 (387)
5 3ss6_A Acetyl-COA acetyltransf 100.0 1.6E-56 5.6E-61 502.0 27.0 333 2-353 57-393 (394)
6 2vu1_A Acetyl-COA acetyltransf 100.0 3.3E-56 1.1E-60 499.5 29.0 334 2-353 55-391 (392)
7 4e1l_A Acetoacetyl-COA thiolas 100.0 2.8E-56 9.5E-61 500.5 28.2 335 2-353 57-395 (395)
8 1afw_A 3-ketoacetyl-COA thiola 100.0 4.1E-56 1.4E-60 497.8 26.0 324 2-353 67-392 (393)
9 2wu9_A 3-ketoacyl-COA thiolase 100.0 9.2E-56 3.2E-60 500.1 25.4 320 10-355 92-420 (442)
10 2ib8_A Acetyl-COA acetyltransf 100.0 3.6E-55 1.2E-59 491.7 26.3 335 2-353 60-394 (395)
11 2iik_A 3-ketoacyl-COA thiolase 100.0 8.2E-55 2.8E-59 490.9 25.4 326 2-353 83-415 (418)
12 3svk_A Acetyl-COA acetyltransf 100.0 2.1E-54 7.2E-59 485.6 28.2 323 2-353 61-406 (407)
13 1wdk_C 3-ketoacyl-COA thiolase 100.0 5.2E-54 1.8E-58 481.1 28.0 325 2-353 59-389 (390)
14 4dd5_A Acetyl-COA acetyltransf 100.0 7.6E-47 2.6E-51 423.7 28.4 311 376-689 5-319 (396)
15 2ib8_A Acetyl-COA acetyltransf 100.0 1.4E-46 4.9E-51 421.8 28.4 313 376-689 6-319 (395)
16 1wl4_A Acetyl-coenzyme A acety 100.0 2.9E-46 9.8E-51 419.3 29.1 311 377-689 5-319 (397)
17 1ulq_A Putative acetyl-COA ace 100.0 2.6E-46 8.9E-51 420.2 27.4 310 377-689 1-320 (401)
18 3ss6_A Acetyl-COA acetyltransf 100.0 5.7E-46 1.9E-50 416.5 27.5 309 377-689 4-316 (394)
19 4e1l_A Acetoacetyl-COA thiolas 100.0 4.5E-46 1.5E-50 417.7 26.6 311 377-689 4-318 (395)
20 3goa_A 3-ketoacyl-COA thiolase 100.0 1.3E-45 4.4E-50 412.3 29.4 301 377-689 1-306 (387)
21 2vu1_A Acetyl-COA acetyltransf 100.0 1.7E-45 5.8E-50 412.6 27.5 310 377-689 2-314 (392)
22 1afw_A 3-ketoacetyl-COA thiola 100.0 2.1E-45 7.2E-50 411.1 26.3 306 372-689 4-317 (393)
23 2wu9_A 3-ketoacyl-COA thiolase 100.0 2.1E-45 7.2E-50 415.5 24.3 303 376-689 28-339 (442)
24 3svk_A Acetyl-COA acetyltransf 100.0 3.4E-43 1.2E-47 394.5 27.1 300 376-689 5-329 (407)
25 2iik_A 3-ketoacyl-COA thiolase 100.0 3.5E-43 1.2E-47 396.1 27.2 301 377-689 29-337 (418)
26 4egv_A Acetyl-COA acetyltransf 100.0 4.3E-45 1.5E-49 420.6 11.2 304 9-322 89-406 (520)
27 1wdk_C 3-ketoacyl-COA thiolase 100.0 6.6E-43 2.3E-47 391.1 28.1 302 376-689 3-309 (390)
28 4egv_A Acetyl-COA acetyltransf 100.0 9.2E-37 3.1E-41 351.3 7.9 309 371-690 9-342 (520)
29 3kzu_A 3-oxoacyl-(acyl-carrier 99.9 2.4E-25 8.2E-30 251.6 20.9 251 10-354 154-426 (428)
30 1j3n_A 3-oxoacyl-(acyl-carrier 99.9 1.3E-25 4.5E-30 252.7 15.3 247 12-353 139-407 (408)
31 3ho9_A 3-oxoacyl-[acyl-carrier 99.9 6.3E-25 2.1E-29 248.4 18.0 248 11-353 155-426 (427)
32 2wge_A 3-oxoacyl-[acyl-carrier 99.9 8.7E-25 3E-29 246.2 17.6 245 12-353 149-415 (416)
33 2gp6_A 3-oxoacyl-[acyl-carrier 99.9 2.3E-24 7.9E-29 243.8 20.6 248 12-353 165-433 (434)
34 3o04_A LMO2201 protein, beta-k 99.9 2.5E-24 8.6E-29 242.5 20.4 247 12-354 142-411 (413)
35 3mqd_A Beta-ketoacyl synthase; 99.9 9.8E-24 3.3E-28 238.6 21.5 246 11-354 159-426 (428)
36 4ddo_A 3-oxoacyl-[acyl-carrier 99.9 2.6E-23 8.9E-28 236.6 24.3 248 11-354 170-442 (451)
37 1e5m_A KAS II, beta ketoacyl a 99.9 1.1E-23 3.7E-28 237.5 20.7 247 12-354 145-415 (416)
38 4ewg_A Beta-ketoacyl synthase; 99.9 1.3E-23 4.4E-28 236.6 20.1 245 11-354 145-411 (412)
39 2ix4_A 3-oxoacyl-[acyl-carrier 99.9 1.6E-23 5.3E-28 237.1 20.0 248 12-353 157-430 (431)
40 2gqd_A 3-oxoacyl-[acyl-carrier 99.9 1.5E-23 5.1E-28 237.6 19.6 248 11-354 165-435 (437)
41 2iwz_A 3-oxoacyl-[acyl-carrier 99.9 2.4E-23 8.4E-28 235.9 20.3 247 11-353 165-437 (438)
42 1tqy_B Actinorhodin polyketide 99.9 1.3E-22 4.4E-27 228.8 22.0 245 11-354 146-411 (415)
43 1tqy_A Beta-ketoacyl synthase/ 99.9 9.8E-23 3.4E-27 230.3 19.9 243 16-353 151-416 (424)
44 1ox0_A Beta ketoacyl-acyl carr 99.9 1.7E-22 5.9E-27 228.6 20.4 244 12-354 161-427 (430)
45 2vba_A 3-oxoacyl-[acyl-carrier 99.9 1.7E-21 5.7E-26 218.8 20.0 244 11-354 140-404 (406)
46 2hg4_A DEBS, 6-deoxyerythronol 99.9 2.7E-21 9.1E-26 236.5 22.3 242 12-354 177-453 (917)
47 2qo3_A Eryaii erythromycin pol 99.9 9.4E-21 3.2E-25 231.6 22.2 242 12-354 155-431 (915)
48 3zen_D Fatty acid synthase; tr 99.8 6.6E-20 2.2E-24 242.6 21.4 253 13-357 2719-3014(3089)
49 3hhd_A Fatty acid synthase; tr 99.8 1.9E-18 6.6E-23 212.0 21.8 241 10-354 139-409 (965)
50 1e5m_A KAS II, beta ketoacyl a 99.8 1.8E-18 6.2E-23 194.8 16.6 191 403-690 78-306 (416)
51 2pff_A Fatty acid synthase sub 99.8 4.3E-19 1.5E-23 216.6 11.2 251 13-355 1084-1460(1688)
52 4ewg_A Beta-ketoacyl synthase; 99.8 5.7E-18 2E-22 190.5 16.6 193 402-690 77-304 (412)
53 2uv8_A Fatty acid synthase sub 99.8 5.6E-18 1.9E-22 214.1 18.3 253 13-355 1283-1659(1887)
54 2uv9_A Fatty acid synthase alp 99.8 7.4E-18 2.5E-22 212.5 19.1 251 13-355 1258-1640(1878)
55 3kzu_A 3-oxoacyl-(acyl-carrier 99.7 1.5E-17 5.3E-22 187.7 12.4 197 401-691 86-319 (428)
56 1ox0_A Beta ketoacyl-acyl carr 99.7 5.5E-17 1.9E-21 183.5 16.8 192 403-690 94-321 (430)
57 3mqd_A Beta-ketoacyl synthase; 99.7 1.6E-17 5.3E-22 187.8 12.0 191 401-689 91-315 (428)
58 2ebd_A 3-oxoacyl-[acyl-carrier 99.7 3.9E-17 1.3E-21 176.5 13.1 176 10-312 86-282 (309)
59 2ix4_A 3-oxoacyl-[acyl-carrier 99.7 4.6E-17 1.6E-21 184.1 10.3 196 401-690 87-319 (431)
60 3ho9_A 3-oxoacyl-[acyl-carrier 99.7 7.1E-17 2.4E-21 182.4 11.8 195 402-691 88-318 (427)
61 1j3n_A 3-oxoacyl-(acyl-carrier 99.7 5E-17 1.7E-21 182.6 10.4 196 401-691 70-301 (408)
62 4ddo_A 3-oxoacyl-[acyl-carrier 99.7 1.5E-16 5.2E-21 180.8 14.4 196 401-691 101-334 (451)
63 3o04_A LMO2201 protein, beta-k 99.7 1.7E-16 5.8E-21 178.6 14.3 194 401-690 73-302 (413)
64 1zow_A 3-oxoacyl-[acyl-carrier 99.7 6.2E-17 2.1E-21 175.3 9.7 176 10-312 87-284 (313)
65 2gqd_A 3-oxoacyl-[acyl-carrier 99.7 3.8E-16 1.3E-20 176.8 15.1 194 401-690 97-326 (437)
66 1ub7_A 3-oxoacyl-[acyl-carrier 99.7 1.8E-16 6.2E-21 172.4 11.6 205 10-354 86-320 (322)
67 1tqy_B Actinorhodin polyketide 99.7 6.1E-16 2.1E-20 174.2 14.9 193 401-691 78-305 (415)
68 2iwz_A 3-oxoacyl-[acyl-carrier 99.7 7.2E-16 2.5E-20 174.6 15.5 193 401-690 96-326 (438)
69 2vba_A 3-oxoacyl-[acyl-carrier 99.6 3.7E-16 1.3E-20 175.3 12.9 189 402-690 71-297 (406)
70 2wge_A 3-oxoacyl-[acyl-carrier 99.6 2.4E-16 8.1E-21 177.3 11.1 193 402-691 83-311 (416)
71 2gp6_A 3-oxoacyl-[acyl-carrier 99.6 8.4E-16 2.9E-20 173.6 15.1 191 402-691 99-328 (434)
72 1u6e_A 3-oxoacyl-[acyl-carrier 99.6 4.1E-16 1.4E-20 170.5 12.1 172 10-304 97-297 (335)
73 1tqy_A Beta-ketoacyl synthase/ 99.6 1.8E-15 6.1E-20 170.8 16.6 194 402-690 73-308 (424)
74 2vz8_A Fatty acid synthase; tr 99.6 1.9E-14 6.5E-19 191.9 20.5 241 10-354 137-407 (2512)
75 2hg4_A DEBS, 6-deoxyerythronol 99.6 1.3E-14 4.6E-19 177.4 14.7 190 402-691 116-334 (917)
76 1hnj_A Beta-ketoacyl-acyl carr 99.5 8.1E-15 2.8E-19 159.0 10.6 179 10-312 87-290 (317)
77 2qo3_A Eryaii erythromycin pol 99.5 2.3E-14 8E-19 175.2 15.7 190 402-691 95-312 (915)
78 2x3e_A 3-oxoacyl-[acyl-carrier 99.5 4.8E-15 1.6E-19 161.8 7.4 177 11-312 88-296 (331)
79 1mzj_A Beta-ketoacylsynthase I 99.5 2.2E-14 7.6E-19 157.1 11.5 179 10-312 96-304 (339)
80 1zow_A 3-oxoacyl-[acyl-carrier 99.5 2E-14 6.8E-19 155.6 9.4 108 387-495 36-143 (313)
81 2h84_A Steely1; thiolase-fold, 99.5 1.4E-14 4.8E-19 160.8 8.2 187 10-315 130-346 (374)
82 1u0m_A Putative polyketide syn 99.5 4E-14 1.4E-18 157.5 11.6 183 10-311 119-326 (382)
83 3hhd_A Fatty acid synthase; tr 99.5 8.5E-14 2.9E-18 171.0 15.1 185 402-690 80-294 (965)
84 4dfe_A 3-oxoacyl-[acyl-carrier 99.5 1.4E-13 4.7E-18 150.3 13.1 165 10-301 101-295 (333)
85 1ted_A PKS18; thiolase fold, s 99.5 1.3E-14 4.3E-19 162.2 4.1 188 10-314 148-360 (393)
86 1u6e_A 3-oxoacyl-[acyl-carrier 99.4 2.2E-13 7.5E-18 148.8 10.4 108 387-495 46-153 (335)
87 3il3_A 3-oxoacyl-[acyl-carrier 99.4 1.4E-12 4.8E-17 141.6 16.3 59 9-68 93-151 (323)
88 2ebd_A 3-oxoacyl-[acyl-carrier 99.4 3E-13 1E-17 146.0 10.5 95 400-495 48-142 (309)
89 1ub7_A 3-oxoacyl-[acyl-carrier 99.4 3.5E-13 1.2E-17 146.4 10.7 95 399-495 47-141 (322)
90 3s21_A 3-oxoacyl-[ACP] synthas 99.4 1.6E-12 5.6E-17 142.5 11.2 194 10-311 104-317 (345)
91 3h78_A PQS biosynthetic enzyme 99.4 3E-12 1E-16 140.9 13.2 58 10-68 110-167 (359)
92 3zen_D Fatty acid synthase; tr 99.3 2.1E-12 7.2E-17 171.7 13.2 196 402-689 2647-2890(3089)
93 3tsy_A Fusion protein 4-coumar 99.3 2.6E-12 8.7E-17 160.1 12.9 197 10-316 724-943 (979)
94 4efi_A 3-oxoacyl-(acyl-carrier 99.3 3.4E-12 1.2E-16 140.3 12.3 60 9-68 101-160 (354)
95 3gwa_A 3-oxoacyl-(acyl-carrier 99.3 9.3E-12 3.2E-16 137.4 15.6 60 9-68 115-174 (365)
96 2pff_A Fatty acid synthase sub 99.3 2.1E-13 7.2E-18 167.1 2.2 93 403-497 1013-1139(1688)
97 1ted_A PKS18; thiolase fold, s 99.3 1.6E-12 5.5E-17 145.1 8.5 96 400-496 111-207 (393)
98 2uv8_A Fatty acid synthase sub 99.3 2.3E-12 7.7E-17 163.5 10.6 91 403-495 1212-1336(1887)
99 4dfe_A 3-oxoacyl-[acyl-carrier 99.3 9.2E-12 3.1E-16 135.9 11.5 111 386-496 49-159 (333)
100 2uv9_A Fatty acid synthase alp 99.3 1.5E-11 5.1E-16 155.7 14.7 91 403-495 1187-1311(1878)
101 3led_A 3-oxoacyl-acyl carrier 99.3 2.8E-11 9.5E-16 134.6 14.3 58 9-68 152-209 (392)
102 2d3m_A Pentaketide chromone sy 99.3 4.8E-11 1.7E-15 133.7 16.2 189 10-313 150-369 (406)
103 3s3l_A CERJ; acyltransferase, 99.3 1.1E-11 3.9E-16 136.3 10.7 58 10-68 91-150 (357)
104 1xpm_A 3-hydroxy-3-methylgluta 99.2 2.9E-11 9.9E-16 135.0 12.7 56 10-65 85-140 (396)
105 3il3_A 3-oxoacyl-[acyl-carrier 99.2 3.4E-11 1.2E-15 130.7 12.4 108 388-496 44-151 (323)
106 4efi_A 3-oxoacyl-(acyl-carrier 99.2 4.7E-11 1.6E-15 131.2 13.4 99 398-496 62-160 (354)
107 3gwa_A 3-oxoacyl-(acyl-carrier 99.2 6.2E-11 2.1E-15 130.8 12.7 98 399-496 77-174 (365)
108 3tsy_A Fusion protein 4-coumar 99.2 8.7E-11 3E-15 146.3 14.3 93 402-495 689-782 (979)
109 3s21_A 3-oxoacyl-[ACP] synthas 99.2 5.7E-11 2E-15 130.2 10.9 98 399-496 65-162 (345)
110 3h78_A PQS biosynthetic enzyme 99.2 6.5E-11 2.2E-15 130.3 11.0 109 387-496 59-167 (359)
111 3lma_A Stage V sporulation pro 99.2 9.4E-11 3.2E-15 125.6 11.4 94 399-499 52-145 (347)
112 1hnj_A Beta-ketoacyl-acyl carr 99.1 1E-10 3.5E-15 126.5 11.1 96 399-495 48-143 (317)
113 3il6_A 3-oxoacyl-[acyl-carrier 99.1 1.8E-10 6E-15 125.0 11.9 94 402-496 52-145 (321)
114 1mzj_A Beta-ketoacylsynthase I 99.1 1.4E-10 4.8E-15 126.7 11.0 96 399-495 57-152 (339)
115 3v7i_A Putative polyketide syn 99.1 8.6E-10 2.9E-14 123.1 17.3 59 10-68 172-231 (413)
116 3il6_A 3-oxoacyl-[acyl-carrier 99.1 7.8E-10 2.7E-14 119.9 14.9 62 6-68 84-145 (321)
117 1i88_A CHS2, chalcone synthase 99.1 1E-09 3.5E-14 122.2 15.1 189 10-312 137-352 (389)
118 3awk_A Chalcone synthase-like 99.1 1.4E-09 4.7E-14 121.6 15.7 188 10-312 150-365 (402)
119 3a5r_A Benzalacetone synthase; 99.1 6.1E-10 2.1E-14 123.9 12.7 189 10-313 133-349 (387)
120 3v7i_A Putative polyketide syn 99.1 1.5E-10 5.2E-15 129.1 7.6 108 387-496 123-231 (413)
121 1ee0_A 2-pyrone synthase; poly 99.1 6E-10 2E-14 124.6 12.4 189 10-313 142-358 (402)
122 2p0u_A Stilbenecarboxylate syn 99.0 8.2E-10 2.8E-14 123.8 13.2 190 10-313 155-371 (413)
123 3euo_A Type III pentaketide sy 99.0 3.6E-10 1.2E-14 125.3 9.5 59 10-68 116-179 (379)
124 3ov2_A Curcumin synthase; type 99.0 6.8E-10 2.3E-14 123.6 11.7 188 10-311 137-351 (393)
125 4ewp_A 3-oxoacyl-[acyl-carrier 99.0 1.2E-09 4E-14 120.0 12.7 58 10-68 98-155 (350)
126 1xes_A Dihydropinosylvin synth 99.0 1.4E-09 4.8E-14 121.9 13.6 189 10-313 160-376 (413)
127 3oit_A OS07G0271500 protein; t 99.0 7E-10 2.4E-14 123.2 10.8 58 10-67 131-189 (387)
128 3s3l_A CERJ; acyltransferase, 99.0 9.5E-10 3.2E-14 120.9 11.4 95 401-496 53-150 (357)
129 3led_A 3-oxoacyl-acyl carrier 99.0 8.9E-10 3E-14 122.5 11.0 94 401-496 116-209 (392)
130 3awk_A Chalcone synthase-like 99.0 1.1E-09 3.8E-14 122.4 11.7 96 400-496 113-209 (402)
131 2vz8_A Fatty acid synthase; tr 99.0 8.9E-10 3E-14 147.3 12.7 184 403-690 79-292 (2512)
132 2p0u_A Stilbenecarboxylate syn 99.0 1.3E-09 4.4E-14 122.2 12.2 96 400-496 118-214 (413)
133 1i88_A CHS2, chalcone synthase 99.0 1.5E-09 5.1E-14 120.9 12.5 96 400-496 100-196 (389)
134 2h84_A Steely1; thiolase-fold, 99.0 1E-09 3.5E-14 121.5 11.1 96 400-496 93-189 (374)
135 3lma_A Stage V sporulation pro 99.0 2.4E-09 8.1E-14 114.8 13.2 185 13-316 91-297 (347)
136 3ov2_A Curcumin synthase; type 99.0 1.7E-09 5.7E-14 120.4 11.9 94 401-495 101-195 (393)
137 3a5r_A Benzalacetone synthase; 99.0 1.6E-09 5.4E-14 120.6 11.7 96 400-496 96-192 (387)
138 1xes_A Dihydropinosylvin synth 99.0 1.5E-09 5.2E-14 121.6 11.4 95 401-496 124-219 (413)
139 3oit_A OS07G0271500 protein; t 99.0 1.5E-09 5.2E-14 120.5 10.5 94 401-495 95-189 (387)
140 2d3m_A Pentaketide chromone sy 98.9 1.6E-09 5.3E-14 121.4 10.6 96 400-496 113-209 (406)
141 4ewp_A 3-oxoacyl-[acyl-carrier 98.9 2.8E-09 9.4E-14 117.0 12.1 99 398-497 58-156 (350)
142 1u0m_A Putative polyketide syn 98.9 2.2E-09 7.7E-14 119.1 11.2 95 400-495 82-177 (382)
143 3e1h_A PKSIIINC, putative unch 98.9 1.1E-09 3.7E-14 123.9 8.5 59 10-68 145-208 (465)
144 1ee0_A 2-pyrone synthase; poly 98.9 2E-09 6.9E-14 120.3 10.6 96 400-496 105-201 (402)
145 3v4n_A HMG-COA synthase; hydro 98.9 1.1E-09 3.7E-14 121.6 7.5 59 10-68 90-148 (388)
146 2x3e_A 3-oxoacyl-[acyl-carrier 98.9 2.8E-09 9.7E-14 115.9 10.2 93 400-495 51-143 (331)
147 2f82_A HMG-COA synthase; HMGS1 98.9 2.7E-09 9.4E-14 120.8 9.9 111 382-495 35-149 (450)
148 3euo_A Type III pentaketide sy 98.9 5.9E-09 2E-13 115.4 11.6 95 401-496 80-179 (379)
149 2v4w_A Hydroxymethylglutaryl-C 98.8 5.3E-09 1.8E-13 117.4 9.3 114 380-496 35-152 (460)
150 3e1h_A PKSIIINC, putative unch 98.8 1.3E-08 4.3E-13 115.2 11.6 93 403-496 111-208 (465)
151 3sqz_A Putative hydroxymethylg 98.8 5.4E-09 1.8E-13 117.0 8.4 59 10-68 119-177 (425)
152 2f82_A HMG-COA synthase; HMGS1 98.8 1.4E-08 5E-13 114.9 11.5 58 10-67 88-149 (450)
153 3v4n_A HMG-COA synthase; hydro 98.7 9.6E-09 3.3E-13 113.9 7.1 96 399-496 53-148 (388)
154 2p8u_A Hydroxymethylglutaryl-C 98.7 2.4E-08 8.2E-13 113.6 10.1 111 379-493 53-168 (478)
155 3sqz_A Putative hydroxymethylg 98.7 2E-08 6.8E-13 112.4 8.3 97 399-497 82-178 (425)
156 1xpm_A 3-hydroxy-3-methylgluta 98.7 2.2E-08 7.6E-13 111.5 7.7 93 399-493 48-140 (396)
157 2v4w_A Hydroxymethylglutaryl-C 98.4 5.7E-07 2E-11 101.0 8.7 58 10-67 90-151 (460)
158 2wya_A Hydroxymethylglutaryl-C 98.4 8.2E-07 2.8E-11 100.8 10.1 94 399-492 51-146 (460)
159 2p8u_A Hydroxymethylglutaryl-C 98.1 1E-05 3.6E-10 91.9 11.2 55 10-65 109-168 (478)
160 2wya_A Hydroxymethylglutaryl-C 96.5 0.0012 4.1E-08 74.7 3.9 52 10-61 90-143 (460)
161 3lpm_A Putative methyltransfer 83.2 1.8 6.3E-05 44.0 6.9 16 736-751 117-132 (259)
162 2as0_A Hypothetical protein PH 73.3 3.8 0.00013 44.7 6.0 29 737-765 288-326 (396)
163 2oo3_A Protein involved in cat 63.8 4.6 0.00016 41.8 3.8 68 683-761 114-182 (283)
164 2gel_A Putative GRAM negative 61.5 4.9 0.00017 40.5 3.4 63 404-475 36-102 (231)
165 3r6m_A YEAZ, resuscitation pro 57.2 5.1 0.00017 39.8 2.6 63 404-475 37-103 (213)
166 2a6a_A Hypothetical protein TM 56.9 5.7 0.00019 39.6 3.0 54 404-461 47-104 (218)
167 3p9n_A Possible methyltransfer 55.3 8.3 0.00028 36.8 3.8 26 736-761 111-137 (189)
168 2ozv_A Hypothetical protein AT 54.8 11 0.00036 38.4 4.7 16 736-751 113-128 (260)
169 1wxx_A TT1595, hypothetical pr 54.5 10 0.00035 41.1 4.8 14 737-750 278-291 (382)
170 3c0k_A UPF0064 protein YCCW; P 54.5 7.3 0.00025 42.4 3.6 29 737-765 292-330 (396)
171 2qm3_A Predicted methyltransfe 54.0 19 0.00067 38.6 6.9 35 731-765 234-268 (373)
172 2b3t_A Protein methyltransfera 53.5 14 0.00047 37.8 5.4 16 736-751 174-189 (276)
173 3m6w_A RRNA methylase; rRNA me 52.6 6.3 0.00021 44.0 2.7 22 729-750 161-182 (464)
174 4dmg_A Putative uncharacterize 52.3 8.6 0.00029 41.9 3.7 15 736-750 278-292 (393)
175 1g60_A Adenine-specific methyl 51.4 5.1 0.00017 40.9 1.6 15 737-751 22-36 (260)
176 3evz_A Methyltransferase; NYSG 51.3 34 0.0012 33.3 7.8 14 737-750 122-135 (230)
177 1boo_A Protein (N-4 cytosine-s 50.5 9.1 0.00031 40.5 3.5 16 736-751 31-46 (323)
178 4dzr_A Protein-(glutamine-N5) 50.2 14 0.00048 35.4 4.6 18 736-753 99-116 (215)
179 1nv8_A HEMK protein; class I a 48.7 11 0.00037 39.0 3.7 16 737-752 188-206 (284)
180 2b9e_A NOL1/NOP2/SUN domain fa 47.3 13 0.00046 38.9 4.1 14 737-750 173-186 (309)
181 2zig_A TTHA0409, putative modi 46.3 7.2 0.00025 40.7 1.8 14 737-750 39-52 (297)
182 1eg2_A Modification methylase 46.0 11 0.00038 39.8 3.2 15 737-751 57-71 (319)
183 1wy7_A Hypothetical protein PH 45.1 25 0.00085 33.7 5.5 14 737-750 111-124 (207)
184 3ven_A O-carbamoyltransferase 43.8 19 0.00065 41.1 4.9 28 239-266 51-78 (576)
185 2yxl_A PH0851 protein, 450AA l 43.3 24 0.00083 39.0 5.7 23 729-751 320-343 (450)
186 3m4x_A NOL1/NOP2/SUN family pr 43.0 4.6 0.00016 45.1 -0.4 21 729-749 166-186 (456)
187 2frx_A Hypothetical protein YE 42.0 14 0.00048 41.4 3.4 22 729-750 178-199 (479)
188 3v97_A Ribosomal RNA large sub 41.0 9.7 0.00033 44.9 2.0 74 733-806 604-698 (703)
189 3bt7_A TRNA (uracil-5-)-methyl 39.0 24 0.00083 37.8 4.7 13 737-749 294-306 (369)
190 3ldg_A Putative uncharacterize 38.8 19 0.00065 39.1 3.7 66 737-805 299-373 (384)
191 2esr_A Methyltransferase; stru 37.0 18 0.00062 33.7 2.9 14 736-749 98-111 (177)
192 3k0b_A Predicted N6-adenine-sp 36.7 27 0.00094 37.9 4.6 34 440-475 188-221 (393)
193 2ift_A Putative methylase HI07 36.1 24 0.00082 34.0 3.7 15 736-750 122-137 (201)
194 1sqg_A SUN protein, FMU protei 35.9 52 0.0018 35.9 6.8 22 729-750 305-327 (429)
195 1ws6_A Methyltransferase; stru 34.6 27 0.00092 32.0 3.7 13 737-749 109-121 (171)
196 3ldu_A Putative methylase; str 34.5 24 0.00081 38.2 3.7 66 737-805 300-374 (385)
197 2oyr_A UPF0341 protein YHIQ; a 33.1 16 0.00055 37.2 1.9 14 738-751 164-177 (258)
198 3ajd_A Putative methyltransfer 33.0 25 0.00085 35.9 3.4 16 736-751 154-169 (274)
199 3eey_A Putative rRNA methylase 32.0 22 0.00074 33.8 2.6 21 730-750 85-105 (197)
200 2igt_A SAM dependent methyltra 31.5 31 0.0011 36.4 3.9 14 737-750 224-237 (332)
201 2dul_A N(2),N(2)-dimethylguano 31.3 22 0.00075 38.5 2.7 25 736-760 129-153 (378)
202 3mti_A RRNA methylase; SAM-dep 31.1 74 0.0025 29.6 6.2 16 736-751 87-102 (185)
203 3dou_A Ribosomal RNA large sub 30.7 45 0.0015 31.9 4.6 71 737-807 90-178 (191)
204 2fhp_A Methylase, putative; al 30.1 24 0.00082 33.0 2.5 13 737-749 115-127 (187)
205 2ivn_A O-sialoglycoprotein end 28.3 55 0.0019 34.4 5.2 55 404-462 49-107 (330)
206 3q87_B N6 adenine specific DNA 27.9 96 0.0033 28.6 6.4 14 737-750 77-90 (170)
207 3tma_A Methyltransferase; thum 27.8 79 0.0027 33.3 6.4 14 737-750 271-284 (354)
208 2b78_A Hypothetical protein SM 27.6 39 0.0013 36.5 3.9 14 737-750 284-297 (385)
209 2frn_A Hypothetical protein PH 27.5 34 0.0012 35.0 3.3 24 736-759 190-213 (278)
210 3eno_A Putative O-sialoglycopr 27.5 23 0.00077 37.6 1.9 54 404-461 54-111 (334)
211 2fpo_A Methylase YHHF; structu 27.0 39 0.0013 32.5 3.5 16 736-751 120-135 (202)
212 2jjq_A Uncharacterized RNA met 26.8 48 0.0016 36.3 4.5 44 738-783 353-399 (425)
213 3la6_A Tyrosine-protein kinase 26.7 40 0.0014 34.8 3.6 18 733-750 196-214 (286)
214 3igf_A ALL4481 protein; two-do 26.6 34 0.0012 36.9 3.1 38 737-789 123-161 (374)
215 1ne2_A Hypothetical protein TA 25.9 26 0.00088 33.5 1.9 15 737-751 109-123 (200)
216 3k6r_A Putative transferase PH 25.1 33 0.0011 35.3 2.6 23 736-758 190-212 (278)
217 3heb_A Response regulator rece 23.1 56 0.0019 29.0 3.6 58 736-794 57-118 (152)
218 3p9z_A Uroporphyrinogen III co 23.0 2.6E+02 0.0088 27.3 8.8 118 671-796 76-212 (229)
219 3tm4_A TRNA (guanine N2-)-meth 22.6 79 0.0027 33.7 5.2 14 737-750 285-298 (373)
220 1uwv_A 23S rRNA (uracil-5-)-me 22.3 98 0.0033 33.8 5.9 43 737-783 355-401 (433)
221 2h00_A Methyltransferase 10 do 22.3 36 0.0012 33.9 2.2 15 737-751 139-153 (254)
222 2qfm_A Spermine synthase; sper 21.4 60 0.002 34.8 3.7 13 736-748 265-277 (364)
223 1dus_A MJ0882; hypothetical pr 21.1 1E+02 0.0036 28.3 5.2 30 736-765 117-148 (194)
224 3dmg_A Probable ribosomal RNA 20.7 57 0.0019 35.1 3.5 50 736-785 296-355 (381)
225 3grc_A Sensor protein, kinase; 20.5 1.1E+02 0.0038 26.4 5.0 57 737-794 49-110 (140)
226 2r6z_A UPF0341 protein in RSP 20.4 36 0.0012 34.5 1.7 15 737-751 160-174 (258)
No 1
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=100.00 E-value=4e-57 Score=507.09 Aligned_cols=334 Identities=40% Similarity=0.651 Sum_probs=302.1
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCccc
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETK 79 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~~ 79 (814)
|++.+.+.+++++++++..+|++..+|+++|+++|+|++.+|.+|+++|++|++|+|||+|+|++|+.|+... +...+
T Consensus 59 g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~ 138 (396)
T 4dd5_A 59 GGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGAR 138 (396)
T ss_dssp ECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCC
T ss_pred EeecCCCCCchHHHHHHHHcCCCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccc
Confidence 4555555678999999999999878999999999999999999999999999999999999999999887542 22333
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
++...+.+.+..+++.+++....|++.|++||++||+|||+||+|++++|+||.+|+++|+|++||+|++++++|| +..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~-~~~ 217 (396)
T 4dd5_A 139 MGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKG-DTV 217 (396)
T ss_dssp SSCCCCEEHHHHHTSEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC-----CEE
T ss_pred cCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCC-cee
Confidence 4444444444456677777677899999999999999999999999999999999999999999999999998887 457
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
+++|+++|+++|+|++.++||+|++ +|++|++|||+++|||+++||++++.|++++.+|+++|.|++.++++|..++.+
T Consensus 218 ~~~d~~~r~~~t~e~l~~~~~v~~p-~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~ 296 (396)
T 4dd5_A 218 VDKDEYIKPGTTMEKLAKLRPAFKK-DGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYG 296 (396)
T ss_dssp ECSCSCCCTTCCHHHHHHCCBSSST-TCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGT
T ss_pred ecCcccccCCCCHHHHhhCCCccCC-CCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHH
Confidence 8999999999999999999999954 489999999999999999999999999999999999999999988889888889
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
+..+++++|+++|++++|||+||+||+|+++.+.++|.||+++.|+|++||++++|||+|++|+++++++++|||+ ++
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ve~~d~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~ 376 (396)
T 4dd5_A 297 PVPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRRDAK 376 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecChHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 78
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+||+++ |+|||+|.+++||.
T Consensus 377 ~gl~~~----------------c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 377 TGLATL----------------CIGGGMGTTLIVKR 396 (396)
T ss_dssp EEEEEE----------------EETTTEEEEEEEEC
T ss_pred eEEEEE----------------cccCCceeEEEEeC
Confidence 999998 99999999999983
No 2
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=7.7e-57 Score=505.82 Aligned_cols=334 Identities=33% Similarity=0.551 Sum_probs=290.1
Q ss_pred cccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCcc
Q psy12877 2 GNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGET 78 (814)
Q Consensus 2 g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~ 78 (814)
|++.+... +++++++++..+|++..+|+++++++|+|++.||.+|+++|++|++|+|||+|+|++|..|+... +...
T Consensus 54 g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~ 133 (401)
T 1ulq_A 54 GCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGF 133 (401)
T ss_dssp ECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSS
T ss_pred EecccCCCCCChHHHHHHHHhCCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccc
Confidence 44444433 57899999999999877999999999999999999999999999999999999999998776332 1111
Q ss_pred cCCCCcccccc----cccCcc-cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCC
Q psy12877 79 KYGGMNLIDGI----VYDGLS-DVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQR 153 (814)
Q Consensus 79 ~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~ 153 (814)
+.+...+.+.+ ...++. +.+....|++.|++||++||+|||++|+||+.||+||..||++|+|++||+|++++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~ 213 (401)
T 1ulq_A 134 PTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRG 213 (401)
T ss_dssp CCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEET
T ss_pred ccCcccccchhhhccccccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCC
Confidence 11110010100 112221 1222356999999999999999999999999999999999999999999999998777
Q ss_pred CCCceeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC
Q psy12877 154 KGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP 233 (814)
Q Consensus 154 ~~~~~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p 233 (814)
||+ ..+++|+.+|+++|+|++.++||+|++ +||+|++|||+++|||+||||+|+++|++++.+|+++|+|++.++++|
T Consensus 214 ~~~-~~~~~d~~~r~~~t~e~~~~~rpif~~-~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p 291 (401)
T 1ulq_A 214 KEE-ILVEQDEGPRRDTSLEKLAALRPVFRE-GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPP 291 (401)
T ss_dssp TEE-EEECSCSCCCTTCCHHHHHHSCBSSST-TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCG
T ss_pred CCc-eeeccccccCCCCCHHHHhhCCCccCC-CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCc
Confidence 653 568999999999999999999999965 589999999999999999999999999999999999999999999888
Q ss_pred CCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCC--CCcccCCCCccccCCCCChHHHHHHHHHH
Q psy12877 234 IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP--SKVNVHGGAVSLGHPIGMSGARIVIHLCH 311 (814)
Q Consensus 234 ~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gasG~~~l~e~v~ 311 (814)
..++.++..+++++|+++|++++|||+||+||+|+++++.++|+||+|+ .|+|++||++++|||+|+||+++++++++
T Consensus 292 ~~~~~~~~~a~~~al~~Agl~~~dId~ie~heafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~ 371 (401)
T 1ulq_A 292 RIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVH 371 (401)
T ss_dssp GGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHcCCCHHHcCEEEEecchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHH
Confidence 8888899999999999999999999999999999999999999999964 58999999999999999999999999999
Q ss_pred HHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 312 ALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 312 qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|||+ ++++++++ |+|||++.+++||.
T Consensus 372 ~L~~~~~~~gl~~~----------------~~ggG~~~a~v~~~ 399 (401)
T 1ulq_A 372 EMRRRKVQFGLATM----------------CIGVGQGIAVVVEG 399 (401)
T ss_dssp HHHHTTCSEEEEEE----------------EETTTEEEEEEEEE
T ss_pred HHhhcCCCEEEEEe----------------ecCCcccEEEEEEe
Confidence 9998 67888887 99999999999985
No 3
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=100.00 E-value=1.3e-56 Score=503.38 Aligned_cols=335 Identities=41% Similarity=0.639 Sum_probs=295.6
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc-cCcccC
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN-RGETKY 80 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~-~~~~~~ 80 (814)
|++.+.+.+++++++++..+|++..+|+++|+++|+||+.||.+|+++|++|++|+|||+|+|+||..|+... +...+.
T Consensus 58 g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~ 137 (397)
T 1wl4_A 58 GHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKI 137 (397)
T ss_dssp ECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSS
T ss_pred EecCCCCCCCHHHHHHHHHcCCCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccc
Confidence 4555544468899999999999878999999999999999999999999999999999999999998776432 111111
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
+.....+....+++.+++....|++.+++||++||+|||+||+||+++|+||.+|+..|+|++||+|++++.+||+ ..+
T Consensus 138 ~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~-~~~ 216 (397)
T 1wl4_A 138 GEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGL-IEV 216 (397)
T ss_dssp SCCCCEEHHHHHTTBCTTTCCBHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE-EEE
T ss_pred CcccccchhccccccCccccchHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCc-eee
Confidence 1111122222234444444467999999999999999999999999999999999999999999999998877653 567
Q ss_pred ccCCccccCCCHHhhhcCCceecc-CCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQK-ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~-~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
++|+.+|+++|+|++.++||+|++ .+|++|++|||+++|||+|+||+|+++|++++.+|+++|+|++..+.+|..++.+
T Consensus 217 ~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~ 296 (397)
T 1wl4_A 217 KTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIG 296 (397)
T ss_dssp CSCSCCCTTCCHHHHHTSCCSSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGT
T ss_pred ccccccCCCCCHHHHhcCCCccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccch
Confidence 899999999999999999998854 3489999999999999999999999999999999999999999999888888889
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
+..+++++|+++||+++|||+||+||+|+++++.++|.||++++|+|++||++++|||+|++|+++++++++|||+ ++
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~~ 376 (397)
T 1wl4_A 297 PIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRS 376 (397)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 78
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+|++++ |+|||+|.+++||.
T Consensus 377 ~gl~~~----------------~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 377 RGVAAL----------------CIGGGMGIAMCVQR 396 (397)
T ss_dssp EEEEEE----------------EETTTEEEEEEEEE
T ss_pred EEEEEE----------------ecccchheEEEEEe
Confidence 899997 99999999999985
No 4
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=100.00 E-value=1.5e-56 Score=500.65 Aligned_cols=325 Identities=31% Similarity=0.450 Sum_probs=293.5
Q ss_pred cccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccC
Q psy12877 2 GNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKY 80 (814)
Q Consensus 2 g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~ 80 (814)
|++.+.+. +++++++++..+|++..+|+++|+++|+|++.+|++|+++|++|++|+|||+|+|+||+.|+.. +.
T Consensus 56 g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~-----~~ 130 (387)
T 3goa_A 56 GCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSH-----GV 130 (387)
T ss_dssp ECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTT-----TB
T ss_pred EcccCCcccccHHHHHHHHHcCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCcccc-----cc
Confidence 56666554 7899999999999988899999999999999999999999999999999999999999988641 11
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
+ . .+ ..+.+.+++ ...|++.|++||++||+|||+||+|++.+|+||..|+++|+|++||+|++++.+||+...+
T Consensus 131 ~---~-~~-~~~~~~~~~-~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~ 204 (387)
T 3goa_A 131 D---F-HP-GLSRNVAKA-AGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQF 204 (387)
T ss_dssp C---C-CT-TCC--------CCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEE
T ss_pred C---c-Cc-ccccccccc-cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCccccc
Confidence 1 0 11 123334444 5679999999999999999999999999999999999999999999999999888876789
Q ss_pred ccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcH
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~ 240 (814)
++|+.+|+++|+|++.++||+|++++|++|++|||+++|||+++||+++++|++++.+|+++|+|++.+.++|..++.++
T Consensus 205 ~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~ 284 (387)
T 3goa_A 205 NYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGP 284 (387)
T ss_dssp CSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTH
T ss_pred ccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHH
Confidence 99999999999999999999995535789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC---CcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS---KVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~---~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
..+++++|+++||+++|||++|+||+|+.+++.++|.||+|++ |+|++||++++|||+|++|+++++++++|||+
T Consensus 285 ~~a~~~al~~agl~~~did~ve~h~~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~ 364 (387)
T 3goa_A 285 VPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKD 364 (387)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEeCcchHHHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999654 89999999999999999999999999999998
Q ss_pred CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 316 GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+++|++++ |+|||+|.+++||.
T Consensus 365 ~~~gl~~~----------------c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 365 AQFGLATM----------------CIGLGQGIATVFER 386 (387)
T ss_dssp CSEEEEEE----------------EETTTEEEEEEEEC
T ss_pred CCEEEEEe----------------ccCcCceEEEEEEe
Confidence 78999998 99999999999984
No 5
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=1.6e-56 Score=502.00 Aligned_cols=333 Identities=40% Similarity=0.592 Sum_probs=302.5
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCccc
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETK 79 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~~ 79 (814)
|++.+.+.+++++++++..+|++..+|+++|+++|+|++.+|.+|+++|++|++|+|||+|+|+||+.|+... +...+
T Consensus 57 g~~~~~~~~~~~a~~i~~~lGl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~ 136 (394)
T 3ss6_A 57 GHCIQRTDEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQR 136 (394)
T ss_dssp ECSSCCGGGCSHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCC
T ss_pred EEccCCCccchHHHHHHHHcCCCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccc
Confidence 5555555578999999999999878999999999999999999999999999999999999999999887432 22223
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
++.....+.+. +++.+++....|++.|++||++||+|||+||+|+++||+||..|+++|+|++||+|++++++||+ ..
T Consensus 137 ~~~~~~~~~~~-~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~-~~ 214 (394)
T 3ss6_A 137 LQHGEIRDTVW-EVLEDPIHHIMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKE-VV 214 (394)
T ss_dssp SSCCCCEEHHH-HHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCE-EE
T ss_pred cCCcccccccc-cccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCc-ee
Confidence 33333333322 45566777778999999999999999999999999999999999999999999999999888874 57
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
+++|+.+|+++|+|++.+++|+|++ +|++|++|||+++|||+++||++++.|++++.+|+++|.|++....+|..++.+
T Consensus 215 ~~~d~~~R~~~t~e~~~~~~pvf~~-~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~ 293 (394)
T 3ss6_A 215 FSKDEHPRADITAEKLAGLKPAFRK-DGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIG 293 (394)
T ss_dssp ECSCCCCCTTCCHHHHHTCCBSSST-TCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGT
T ss_pred ecccccccCCCCHHHHhhCCCccCC-CCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHH
Confidence 8999999999999999999999954 489999999999999999999999999999999999999999988889888889
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
+..+++++|+++|++++|||++|+||+|+.+.+.+.|.||++++|+|++||++++|||.|+||+++++++++||++ ++
T Consensus 294 ~~~a~~~al~~agl~~~dId~ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~ 373 (394)
T 3ss6_A 294 PAPAIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRRGLE 373 (394)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCCchHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 78
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+|++++ |+|||+|.+++||.
T Consensus 374 ~gl~~~----------------c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 374 KGIASL----------------CVGGGIGVALFIEA 393 (394)
T ss_dssp EEEEEE----------------EETTTEEEEEEEEE
T ss_pred EEEEEE----------------ccCcCceeEEEEEc
Confidence 999998 99999999999984
No 6
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=100.00 E-value=3.3e-56 Score=499.46 Aligned_cols=334 Identities=40% Similarity=0.626 Sum_probs=294.4
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCc-cccCcccC
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFY-LNRGETKY 80 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~-~~~~~~~~ 80 (814)
|++++.+.+++++++++..+|++..+|+++++++|+||+.||.+|+++|++|++|+|||+|+|+||..|+. ..+...++
T Consensus 55 g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~ 134 (392)
T 2vu1_A 55 GQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKM 134 (392)
T ss_dssp ECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCS
T ss_pred EecCCCCCCcHHHHHHHHHcCCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCcccccccccccc
Confidence 55555555689999999999998559999999999999999999999999999999999999999987763 10111111
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
+.....+.+..+++.+++....|++.+++||++||+|||++|+|++++|+||.+||++|+|++||+|++.+.+|| ...+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~-~~~f 213 (392)
T 2vu1_A 135 GDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKG-DITV 213 (392)
T ss_dssp SCEEEEEHHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTC-CEEE
T ss_pred CcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCC-ceee
Confidence 110111111223344444455799999999999999999999999999999999999999999999999887766 3568
Q ss_pred ccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcH
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~ 240 (814)
++||.+|+++|+|+++++||+|++ +|++|++|||+++|||+|+||+++++|++++.+|+++|+|++....+|..++.++
T Consensus 214 ~~d~~~r~~~t~e~~~~~~~v~~~-~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~ 292 (392)
T 2vu1_A 214 DADEYIRHGATLDSMAKLRPAFDK-EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGP 292 (392)
T ss_dssp CSCSSCCTTCCHHHHHTCCCSSCT-TCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTH
T ss_pred ccccccCCCCCHHHHhcCCCccCC-CCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhH
Confidence 999999999999999999999943 4999999999999999999999999999999999999999999988888888899
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CCC
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQK 318 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~~ 318 (814)
..+++++|+++|++++|||+||+||+|+.+.+.++|.||++++|+|++||++++|||+|++|+++++++++|||+ +++
T Consensus 293 ~~a~~~al~~agl~~~dId~ie~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~~~ 372 (392)
T 2vu1_A 293 IPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARK 372 (392)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHcCCCHHHcCEEEeccccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhccCCCE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998 788
Q ss_pred CCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 319 GQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 319 gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
|++++ |+|||++.+++||.
T Consensus 373 gl~~~----------------~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 373 GLATL----------------CIGGGMGVAMCIES 391 (392)
T ss_dssp EEEEE----------------EETTTEEEEEEEEC
T ss_pred EEEEE----------------ecccchheEEEEEe
Confidence 99987 99999999999985
No 7
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=100.00 E-value=2.8e-56 Score=500.53 Aligned_cols=335 Identities=43% Similarity=0.684 Sum_probs=303.6
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccc--cCccc
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETK 79 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~--~~~~~ 79 (814)
|++.+.+.+++++++++..+|++..+|+++|+++|+|++.+|.+|+++|++|++|+|||+|+|+||+.|+... +...+
T Consensus 57 g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~ 136 (395)
T 4e1l_A 57 GNVLQTGLGQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSK 136 (395)
T ss_dssp ECCCCSSTTCCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEE
T ss_pred EeccCCCCcchHHHHHHHHcCCCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccc
Confidence 5666666678999999999999878999999999999999999999999999999999999999999876432 12223
Q ss_pred CCCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCcee
Q psy12877 80 YGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI 159 (814)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~ 159 (814)
++.....+.+..+++.+++....|++.|++||++||+|||++++|++.+|++|.+|+++|+|++||+|++++++||++..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~ 216 (395)
T 4e1l_A 137 MGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIET 216 (395)
T ss_dssp SCCC------CCTTEEEETTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEE
T ss_pred cCccccchhhcccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceE
Confidence 33333444444566677776778999999999999999999999999999999999999999999999999988887778
Q ss_pred eccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCc
Q psy12877 160 IVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIA 239 (814)
Q Consensus 160 ~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~ 239 (814)
+++|+++|+++|+|++.+++|+|++ +||+|++|||+++|||+++||++++.|++++.+|+++|.|++...++|..++.+
T Consensus 217 ~~~d~~~r~~~t~e~l~~~~~v~~~-~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~ 295 (395)
T 4e1l_A 217 IDKDEYPKLGMTFEGLSKLKPAFKK-DGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTG 295 (395)
T ss_dssp ECSCSCCCTTCCHHHHHHCCBSSST-TCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCT
T ss_pred ECCccccCCCCCHHHHhhCCCccCC-CCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHH
Confidence 9999999999999999999999965 489999999999999999999999999999999999999999998899888889
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--CC
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--GQ 317 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--g~ 317 (814)
+..+++++|+++|++++|||++|+||+|+.+.+.+.|.||++++|+|++||++++|||+|+||+++++++++||++ ++
T Consensus 296 ~~~ai~~al~~agl~~~dId~ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~~~~ 375 (395)
T 4e1l_A 296 PIPATRKALKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKVE 375 (395)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecChhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 78
Q ss_pred CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+|++++ |+|||+|.+++||.
T Consensus 376 ~gl~~~----------------c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 376 TGLATL----------------CIGGGQGISMVVSR 395 (395)
T ss_dssp EEEEEE----------------ESSTTEEEEEEEEC
T ss_pred EEEEEE----------------ccCCCceEEEEEeC
Confidence 999998 99999999999983
No 8
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=100.00 E-value=4.1e-56 Score=497.83 Aligned_cols=324 Identities=35% Similarity=0.535 Sum_probs=284.1
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCC
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYG 81 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~ 81 (814)
|++.+...+++++++++..+|++..+|+++|+++|+|++.+|.+|+++|++|++|+|||+|+|++|+.|+...+. +.
T Consensus 67 g~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~---~~ 143 (393)
T 1afw_A 67 GNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPL---GM 143 (393)
T ss_dssp ECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTT---CS
T ss_pred EecCCCCCCChHHHHHHHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCccccccc---cc
Confidence 344443345689999999999977899999999999999999999999999999999999999998766532110 00
Q ss_pred CCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeec
Q psy12877 82 GMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIV 161 (814)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~ 161 (814)
.....+...++ .+.....|++.+++||++||+|||+||+|++++|+||.+|+++|+|++||+|+++++ |+ .++
T Consensus 144 --~~~~~~~~~g~-~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~--~~--~~~ 216 (393)
T 1afw_A 144 --ISSEELQKNRE-AKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD--GS--ICQ 216 (393)
T ss_dssp --CCCHHHHHCTT-GGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT--SC--EEC
T ss_pred --ccchhhhhccc-ccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC--Cc--eec
Confidence 00000111233 222335699999999999999999999999999999999999999999999998765 32 789
Q ss_pred cCCccccCCCHHhhhcCCceeccCC-CccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcH
Q psy12877 162 NEDEEYKKINFEKFKSLATVFQKEN-GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240 (814)
Q Consensus 162 ~d~~~r~~~t~e~~~~~~~~~~~~~-~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~ 240 (814)
+|+.+|+++|+|++.++||+|++ + ||+|++|||+++|||+++||+|+++|++++.+|+++|+|++.++++|..++.++
T Consensus 217 ~d~~~r~~~t~e~~~~~rpvf~~-~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~ 295 (393)
T 1afw_A 217 SDEGPRPNVTAESLSSIRPAFIK-DRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGP 295 (393)
T ss_dssp SCSSCCSCCCHHHHHHCCBSCC----CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHH
T ss_pred cccccCCCCCHHHHhcCCCcccC-CCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhH
Confidence 99999999999999999999954 3 799999999999999999999999999999999999999999998888888899
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc-CCCC
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-GQKG 319 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-g~~g 319 (814)
..+++++|+++||+++|||+||+||+|+++++.++|.||++++|+|++||++++|||+|++|+++++++++|||+ +. |
T Consensus 296 ~~a~~~al~~Agl~~~dId~ve~h~~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~-g 374 (393)
T 1afw_A 296 AYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQI-G 374 (393)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTCE-E
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcCC-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998 44 8
Q ss_pred CccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 320 QLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 320 l~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++++ |+|||+|.+++||.
T Consensus 375 l~~~----------------c~ggg~g~a~~~~~ 392 (393)
T 1afw_A 375 VVSM----------------CIGTGMGAAAIFIK 392 (393)
T ss_dssp EEEE----------------EETTTEEEEEEEEE
T ss_pred EEEE----------------eecccceEEEEEEe
Confidence 8887 99999999999984
No 9
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=100.00 E-value=9.2e-56 Score=500.15 Aligned_cols=320 Identities=33% Similarity=0.533 Sum_probs=283.5
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
+++++++++..+|++..+|+++|+++|+|++.||.+|+++|++|++|+|||+|+|++|..|+.... ...+.+
T Consensus 92 ~~~~a~~va~~lGl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~--------~~~~~~ 163 (442)
T 2wu9_A 92 RASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEG--------SVNPAV 163 (442)
T ss_dssp HHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCS--------CCCGGG
T ss_pred CChHHHHHHHHcCCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccc--------ccchhh
Confidence 357899999999997789999999999999999999999999999999999999999987753210 000111
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeec--CCC---CCceeeccCC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIP--QRK---GKADIIVNED 164 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~--~~~---~~~~~~~~d~ 164 (814)
..+++ +++....|++.|++||++||+|||+||+||+.+|+||..||++|+|++||+|++++ ++| +....+++||
T Consensus 164 ~~~~~-~~~~~~~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De 242 (442)
T 2wu9_A 164 KKFAQ-AQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDD 242 (442)
T ss_dssp GGCHH-HHHTTSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCT
T ss_pred hhccc-cccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeeccc
Confidence 11122 23334579999999999999999999999999999999999999999999999874 221 0124689999
Q ss_pred ccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcHHHHH
Q psy12877 165 EEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAI 244 (814)
Q Consensus 165 ~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~~~a~ 244 (814)
.+|+++|+|++.++||+|++ +||+|++|||+++|||+||||+|+++|++++.+|+++|+|++.++++|..++.++..++
T Consensus 243 ~~r~~~t~e~~~~~rpvfd~-~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~ 321 (442)
T 2wu9_A 243 GIRPTTTLASLGKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAI 321 (442)
T ss_dssp TCCTTCCHHHHHTSCCSSCT-TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHH
T ss_pred CcCCCCCHHHHhcCCCccCC-CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHH
Confidence 99999999999999999965 58999999999999999999999999999999999999999999988888888999999
Q ss_pred HHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc-C---CCCC
Q psy12877 245 PTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-G---QKGQ 320 (814)
Q Consensus 245 ~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-g---~~gl 320 (814)
+++|+++||+++|||+||+||+|+++++.++|.||++++|+|++||++++|||+|+||+++++++++|||+ + ++||
T Consensus 322 ~~Al~~AGl~~~DId~iE~h~aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~~~~~~gl 401 (442)
T 2wu9_A 322 PAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGV 401 (442)
T ss_dssp HHHHHHTTCCGGGCCEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHHcCCCHHHCCEEEEeCCChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997 4 5677
Q ss_pred ccccccCccccccccceeEEecCCcceeEEEecCc
Q psy12877 321 LSQFWYDENTTQRLSEEVVCRAGKEGSIALISCPT 355 (814)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~~ 355 (814)
+++ |+|||++.+++||...
T Consensus 402 as~----------------~~GGG~~~a~v~~~~~ 420 (442)
T 2wu9_A 402 VSM----------------CIGTGMGAAAVFERGD 420 (442)
T ss_dssp EEE----------------EETTTEEEEEEEEECS
T ss_pred EEe----------------ecccchheEEEEEecc
Confidence 776 9999999999999753
No 10
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=100.00 E-value=3.6e-55 Score=491.65 Aligned_cols=335 Identities=64% Similarity=0.977 Sum_probs=294.0
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCC
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYG 81 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~ 81 (814)
|++.+.+.+++++++++..+|++..+|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++..|+...+....++
T Consensus 60 g~~~~~~~~~~~a~~va~~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~ 139 (395)
T 2ib8_A 60 GNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYG 139 (395)
T ss_dssp ECSCCTTSCSCHHHHHHHHTTCCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTT
T ss_pred EeccCCCCCchHHHHHHHHcCCCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccc
Confidence 55555556789999999999997789999999999999999999999999999999999999999987763222111111
Q ss_pred CCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeec
Q psy12877 82 GMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIV 161 (814)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~ 161 (814)
.....+...++.+.+++....|++.|++|+++||+|||+++++|+++|+||.+|+++++|++||+|+++++++....+++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~ 219 (395)
T 2ib8_A 140 GVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVK 219 (395)
T ss_dssp CEEEEEHHHHHTTEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEEC
T ss_pred cccccccccccccccccccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeec
Confidence 11111111233444555566799999999999999999999999999999999999999999999999876532235688
Q ss_pred cCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcHH
Q psy12877 162 NEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPA 241 (814)
Q Consensus 162 ~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~~ 241 (814)
+||.+| +++.|++.++||+|++++||+|++|||+++|||+++||+|+++|++++.+|+++|+|++....+|..++.++.
T Consensus 220 ~D~~~r-~~~~~~l~~l~~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~ 298 (395)
T 2ib8_A 220 EDEEYK-RVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPV 298 (395)
T ss_dssp SCSGGG-SCCTTTGGGSCCTTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHH
T ss_pred cccccc-cCCHHHHhcCCccccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHH
Confidence 999999 5899999999999976679999999999999999999999999999999999999999998778877778889
Q ss_pred HHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcCCCCCc
Q psy12877 242 FAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSGQKGQL 321 (814)
Q Consensus 242 ~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g~~gl~ 321 (814)
.+++++|+++|++++|||++|+||+|+++++.++|+||++++|+|++||++++|||+|+||+++++++++|||++++|++
T Consensus 299 ~a~~~al~~Agl~~~dId~ie~~D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~gl~ 378 (395)
T 2ib8_A 299 YAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQGEYGLA 378 (395)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHcCCCHHHcCEEEEccccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhhCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998778888
Q ss_pred cccccCccccccccceeEEecCCcceeEEEec
Q psy12877 322 SQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++ |+|||+|.+++||.
T Consensus 379 ~~----------------~~ggG~g~a~~~~~ 394 (395)
T 2ib8_A 379 SI----------------CNGGGGASAMLIQK 394 (395)
T ss_dssp EE----------------EETTTEEEEEEEEE
T ss_pred EE----------------ecccCHhheEEEEc
Confidence 87 99999999999984
No 11
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=100.00 E-value=8.2e-55 Score=490.88 Aligned_cols=326 Identities=35% Similarity=0.531 Sum_probs=283.4
Q ss_pred cccccCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCC
Q psy12877 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYG 81 (814)
Q Consensus 2 g~~~~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~ 81 (814)
|++.+...+++++|+++..+|++..+|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.+|+.|+.... ...
T Consensus 83 g~~~~~~~~~~~a~~~a~~lGl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~---~~~ 159 (418)
T 2iik_A 83 GNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPG---NIT 159 (418)
T ss_dssp ECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC--------CCC
T ss_pred EecCCccccccHHHHHHHHcCCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCc---ccc
Confidence 44444333568999999999997789999999999999999999999999999999999999999987753210 000
Q ss_pred CCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeec--CCCCC--c
Q psy12877 82 GMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIP--QRKGK--A 157 (814)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~--~~~~~--~ 157 (814)
..+.. .+.+.++ ...|++.++++|++||+|||+||+||+++|+||..|+.+++|++||+|+++. +++|+ .
T Consensus 160 -~~~~~---~~~~~~~--~~~~g~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~ 233 (418)
T 2iik_A 160 -SRLME---KEKARDC--LIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRS 233 (418)
T ss_dssp -TTGGG---CHHHHGG--GSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEE
T ss_pred -hhhhc---ccccccc--cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccc
Confidence 00000 0111111 1458999999999999999999999999999999999999999999999764 33332 2
Q ss_pred eeeccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCC
Q psy12877 158 DIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237 (814)
Q Consensus 158 ~~~~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~ 237 (814)
..+++|+.+|+++|+|+++++||+|++. +|+|++|||+++|||+|+||+|+++|++++.+|+++|.|++..+.+|..++
T Consensus 234 ~~~~~d~~~rp~~t~e~l~~~~~vfd~~-~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~ 312 (418)
T 2iik_A 234 ITVTQDEGIRPSTTMEGLAKLKPAFKKD-GSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMG 312 (418)
T ss_dssp EEECSCTTCCTTCCHHHHHHCCCSSSTT-CCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGG
T ss_pred eeeecccCcCCCCCHHHHhhCCCcccCC-CceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcc
Confidence 4688999999999999999999999653 799999999999999999999999999999999999999999888888888
Q ss_pred CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 238 ~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
.++..+++++|+++||+++|||+||+||+|+.+++.++|+||++++|+|++||++++|||+|+||+++++++++|||+
T Consensus 313 ~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~~ 392 (418)
T 2iik_A 313 IGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRG 392 (418)
T ss_dssp GHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHHHHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHHHHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC-CCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 316 GQ-KGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~-~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
++ +|++++ |+|||+|.+++||.
T Consensus 393 ~~~~gl~~~----------------c~ggG~g~a~~~e~ 415 (418)
T 2iik_A 393 KRAYGVVSM----------------CIGTGMGAAAVFEY 415 (418)
T ss_dssp SCEEEEEEE----------------EETTTEEEEEEEEE
T ss_pred CCeeeEEEE----------------eeccchhheEEEec
Confidence 55 899998 99999999999985
No 12
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=100.00 E-value=2.1e-54 Score=485.57 Aligned_cols=323 Identities=33% Similarity=0.511 Sum_probs=269.0
Q ss_pred cccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccC
Q psy12877 2 GNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKY 80 (814)
Q Consensus 2 g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~ 80 (814)
|++.+.+. +++++|+++..+|+|..+|+++|+++|+|++.+|.+|+++|++|++|+|||+|+|+||+.|+..... .+
T Consensus 61 g~~~~~~~~~~~~a~~va~~lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~--~~ 138 (407)
T 3svk_A 61 GVVSPVGDQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGG--AW 138 (407)
T ss_dssp ECC--------CHHHHHHHHTTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-------------C
T ss_pred EecCccccccCcHHHHHHHHcCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCccccccc--cc
Confidence 55555443 6789999999999987999999999999999999999999999999999999999999988643211 11
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
. .+. .+..++....|++.|++++++||++||+||+|++.+|++|..+.++|+|.+||+|+..+ +| ...+
T Consensus 139 ~----~~~----~~~~~~~~~~~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~--~g-~~~~ 207 (407)
T 3svk_A 139 A----TDP----ETNYRIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQ--NG-LVIL 207 (407)
T ss_dssp C----CCT----TTCCCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECT--TS-CEEE
T ss_pred c----cCc----hhhccccccCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecC--CC-ceee
Confidence 0 010 11122233569999999999999999999999999999999999999999999999843 33 2468
Q ss_pred ccCCccccCCCHHhhhcCCceeccC--------------------CCccccCCCCCcCceeeEEEEcCHHHHHHcCCCcc
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQKE--------------------NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPL 220 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~~--------------------~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~ 220 (814)
++|+.+|+++|+|+++++||+|++. .+|+|++|||+++|||+++||+|+++|++++.+|+
T Consensus 208 ~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~ 287 (407)
T 3svk_A 208 DHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPR 287 (407)
T ss_dssp CSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCC
T ss_pred CCccccCCCCCHHHHhhCCCeecCCCccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCc
Confidence 9999999999999999999999532 23459999999999999999999999999999999
Q ss_pred EEEEEEEEecCCCCCCCCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCC
Q psy12877 221 ARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGM 300 (814)
Q Consensus 221 a~I~g~~~~~~~p~~~~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~ga 300 (814)
++|.|++..+++|..++.++..+++++|+++||+++|||++|+||+|+.+++.++|.||++++|+|++||++++|||+|+
T Consensus 288 a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~~e~hdaf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~ga 367 (407)
T 3svk_A 288 ARIVATATSGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGA 367 (407)
T ss_dssp EEEEEEEEC------CCCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGG
T ss_pred EEEEEEEEeccCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEeChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHH
Confidence 99999999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 301 SGARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 301 sG~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
||+++++++++|||+ +++|++++ |+|||+|.+++||.
T Consensus 368 sG~~~~~~~~~~L~~~~~~~gl~~~----------------c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 368 TGAMITGTMVDELERRNARRALITL----------------CIGGGMGVATIIER 406 (407)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEE----------------ECSSSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEe----------------eccCcceEEEEEEc
Confidence 999999999999998 78999998 99999999999984
No 13
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=100.00 E-value=5.2e-54 Score=481.10 Aligned_cols=325 Identities=30% Similarity=0.452 Sum_probs=288.1
Q ss_pred cccccCCC-CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccC
Q psy12877 2 GNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKY 80 (814)
Q Consensus 2 g~~~~~~~-~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~ 80 (814)
|++.+.+. +++++++++..+|++..+|+++++++|+|++.||.+|+++|++|++|+|||+|+|.+|..|+.... +
T Consensus 59 g~~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~----~ 134 (390)
T 1wdk_C 59 GCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGV----D 134 (390)
T ss_dssp ECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTB----C
T ss_pred EeeccccCCCCcHHHHHHHHcCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCccccc----c
Confidence 44444433 578999999999998789999999999999999999999999999999999999999987753211 1
Q ss_pred CCCcccccccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceee
Q psy12877 81 GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADII 160 (814)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~ 160 (814)
.... +..++ +.....|++.|++||++||+|||++|+|++++|+||..|+++|+|.+||+|++.+.+++....+
T Consensus 135 ~~~~----~~~~~---~~~~~~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~f 207 (390)
T 1wdk_C 135 PNPH----MSLYA---AKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIF 207 (390)
T ss_dssp CCGG----GGGTS---CGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEE
T ss_pred cCcc----ccccC---CcchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceee
Confidence 0000 00111 1112458999999999999999999999999999999999999999999999887666544578
Q ss_pred ccCCccccCCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCCcH
Q psy12877 161 VNEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 240 (814)
Q Consensus 161 ~~d~~~r~~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~~~ 240 (814)
++||++|+++|+|+++++||+|+.++|++|++|||+++|||+||||+|+++|++++.+|+++|+|++.++++|..++.++
T Consensus 208 d~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~ 287 (390)
T 1wdk_C 208 DYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGP 287 (390)
T ss_dssp CSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTH
T ss_pred ccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhH
Confidence 99999999999999999999994425779999999999999999999999999999999999999999988888788899
Q ss_pred HHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCC---CCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDID---PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 241 ~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~---~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
..+++++|+++|++++|||+||+||+|+++++.++|.||++ ..|+|++||++++|||+|++|+++++++++|||+
T Consensus 288 ~~a~~~al~~Agl~~~dId~ve~~d~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~~ 367 (390)
T 1wdk_C 288 VPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNG 367 (390)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCChhhCcEEEeccCCHHHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999 6799999999999999999999999999999998
Q ss_pred CCCCCccccccCccccccccceeEEecCCcceeEEEec
Q psy12877 316 GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+++|++++ |+|||++.+++||.
T Consensus 368 ~~~gl~~~----------------~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 368 GTFGLSTM----------------CIGLGQGIATVFER 389 (390)
T ss_dssp CSEEEEEE----------------EETTTEEEEEEEEC
T ss_pred CCEEEEEe----------------cccchheEEEEEEe
Confidence 67899987 99999999999984
No 14
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=100.00 E-value=7.6e-47 Score=423.69 Aligned_cols=311 Identities=40% Similarity=0.621 Sum_probs=274.5
Q ss_pred CCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc
Q psy12877 376 KPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~ 455 (814)
.|++|+|||++||||+++.+.+++.++.+|+.+|+++||+|+|+++++||.+++|++.+...+++.++.++..+|++...
T Consensus 5 ~m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~ 84 (396)
T 4dd5_A 5 NMREVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEK 84 (396)
T ss_dssp -CCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTS
T ss_pred cCCcEEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCc
Confidence 36789999999999999988889999999999999999999999999999999999887767788999999999998778
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCccccccccccccccccccccHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGN 533 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 533 (814)
|.++++.+|+|++.+|..|+++|++|.+|+||++|+|+|++.|+... ++....+.....+.+..+++.+++....|++
T Consensus 85 p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (396)
T 4dd5_A 85 PAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGI 164 (396)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHH
T ss_pred eEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHH
Confidence 99999999999999999999999999999999999999999886532 2222222222333334455566666678999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccccccc
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQK 612 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~ 612 (814)
.|++||++||+|||+||+|+++||+||.++...++|++||+|++++++++. .+++.|+.+| ++|+|+|.++||+|.+
T Consensus 165 ~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~--~~~~~d~~~r~~~t~e~l~~~~~v~~p 242 (396)
T 4dd5_A 165 TAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGD--TVVDKDEYIKPGTTMEKLAKLRPAFKK 242 (396)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----C--EEECSCSCCCTTCCHHHHHHCCBSSST
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCc--eeecCcccccCCCCHHHHhhCCCccCC
Confidence 999999999999999999999999999997778999999999999887763 5689999998 6999999999999985
Q ss_pred CCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 613 ~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
.+|+|++|||+++|||++|||++++.|++++.+|+++|+|++..+++|..++.++..+++++|+++|+ .+||+|.|
T Consensus 243 -~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve 319 (396)
T 4dd5_A 243 -DGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDLVE 319 (396)
T ss_dssp -TCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred -CCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 68999999999999999999999999999999999999999998889998888999999999999999 68999998
No 15
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=100.00 E-value=1.4e-46 Score=421.81 Aligned_cols=313 Identities=62% Similarity=0.946 Sum_probs=273.8
Q ss_pred CCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc
Q psy12877 376 KPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~ 455 (814)
.+++|+|||++||||+++.+.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+...+++.++.++..+|++...
T Consensus 6 ~~~~v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~ 85 (395)
T 2ib8_A 6 TLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPIST 85 (395)
T ss_dssp BCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTC
T ss_pred CCCCeEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCc
Confidence 35789999999999999988888999999999999999999999999999999999877666788999999999997678
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
|.++++++|+||+.||..|+++|++|++|++|++|+|+++..|....+....++.....+...+..+.+++...+|++.|
T Consensus 86 p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a 165 (395)
T 2ib8_A 86 PCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCA 165 (395)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHHH
T ss_pred eEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHHH
Confidence 99999999999999999999999999999999999999988775322211111110111111233444555667899999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCC
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENG 615 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~ 615 (814)
++|+++||+|||++++++++||+||.++++.++|++||+|++++++ .+|..++++|+.+|++++|+|.++||+|.+.++
T Consensus 166 ~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~-~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~~g 244 (395)
T 2ib8_A 166 ENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVK-GQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENG 244 (395)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCT-TSCCEEECSCSGGGSCCTTTGGGSCCTTCSSSC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeeccc-CCcceeeccccccccCCHHHHhcCCccccCCCC
Confidence 9999999999999999999999999998888999999999999887 455567899999999999999999999975579
Q ss_pred ccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 616 TVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 616 plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
|+|++|||+++|||++|||+|++.|+++|.+|+++|+|++..+.+|..++.++..|++++|+++|+ .+||+|.|
T Consensus 245 ~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie 319 (395)
T 2ib8_A 245 TVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMWE 319 (395)
T ss_dssp CCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred CcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcCEEE
Confidence 999999999999999999999999999999999999999988888888888899999999999999 58999998
No 16
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=100.00 E-value=2.9e-46 Score=419.34 Aligned_cols=311 Identities=40% Similarity=0.600 Sum_probs=268.5
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
+++|+|||++||||+++.|.++++++.+|+.+|+++||+|+|+++++||.+++|+..+...++.+++.++..+|++...|
T Consensus 5 ~~~v~Ivg~~~tp~g~~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 84 (397)
T 1wl4_A 5 SDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVP 84 (397)
T ss_dssp CSCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC
T ss_pred CCcEEEEEcccCCceeCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCcc
Confidence 46899999999999999999999999999999999999999999999999999998776556789999999999976789
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC-CCccCCCCccccccccccccccccccccHHHHH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN-RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
.++++++|+||+.||..|+++|++|++|+||++|+|+|+..|.... ++....+.....+.....++..++....|++++
T Consensus 85 ~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a 164 (397)
T 1wl4_A 85 AWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITA 164 (397)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHH
T ss_pred EEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHHHH
Confidence 9999999999999999999999999999999999999998775322 111111110001111112233333346799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccC-
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKE- 613 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~- 613 (814)
++||++||+|||+||+|+++||+||.++.+.++|++||+|++++++++. +++++|+.+| ++|+|++.++||+|++.
T Consensus 165 ~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~--~~~~~d~~~r~~~t~e~~~~~rpvfd~~~ 242 (397)
T 1wl4_A 165 ENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGL--IEVKTDEFPRHGSNIEAMSKLKPYFLTDG 242 (397)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHTSCCSSCCSS
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCc--eeeccccccCCCCCHHHHhcCCCccCCCC
Confidence 9999999999999999999999999997789999999999998766553 5678899887 79999999999999753
Q ss_pred CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+|++|++|||+++|||++|||+|++.|+++|.+|+++|+|++..+++|..++.++..|++++|+++|+ .+||+|.|
T Consensus 243 ~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie 319 (397)
T 1wl4_A 243 TGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFE 319 (397)
T ss_dssp CCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred CCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCCEEE
Confidence 38999999999999999999999999999999999999999999988988888999999999999999 68999998
No 17
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=2.6e-46 Score=420.21 Aligned_cols=310 Identities=33% Similarity=0.532 Sum_probs=263.8
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCCCc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~~~ 455 (814)
|++|+|||++||||+++.+.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+... +++.++.++..+|++...
T Consensus 1 m~~v~Ivg~~rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 80 (401)
T 1ulq_A 1 MPEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV 80 (401)
T ss_dssp --CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC
T ss_pred CCceEEEEcccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc
Confidence 3679999999999999988888999999999999999999999999999999998876544 578899999999997678
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCC--CccCCCCccccccc----cccccc-ccccc
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNR--GETKYGGMNLIDGI----VYDGLS-DVYNK 528 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~--~~~~~~~~~~~~~~----~~~~~~-~~~~~ 528 (814)
|+++++++|+||+.||..|+++|++|++|+||++|+|+|++.|+.... .....+.....+.. ...++. +.+..
T Consensus 81 p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 160 (401)
T 1ulq_A 81 AGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGT 160 (401)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCC
T ss_pred cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccccccccc
Confidence 999999999999999999999999999999999999999987753221 11111100000000 011221 11224
Q ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccc
Q psy12877 529 IHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLA 607 (814)
Q Consensus 529 ~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~ 607 (814)
..|++.|++||++||+|||+||+|+++||+||.++...++|++||+|++++++++. +++++|+.+| ++|+|++.++|
T Consensus 161 ~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~--~~~~~d~~~r~~~t~e~~~~~r 238 (401)
T 1ulq_A 161 ESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEE--ILVEQDEGPRRDTSLEKLAALR 238 (401)
T ss_dssp CCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHHSC
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCc--eeeccccccCCCCCHHHHhhCC
Confidence 56999999999999999999999999999999984345699999999998776653 6789999998 79999999999
Q ss_pred cccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-Cccee
Q psy12877 608 TVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 608 p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
|+|++ +||+|++|||+++|||++|||+|+++|+++|.+|+++|+|++..+++|..++.++..|++++|+++|+ .+||+
T Consensus 239 pif~~-~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 317 (401)
T 1ulq_A 239 PVFRE-GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLG 317 (401)
T ss_dssp BSSST-TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCS
T ss_pred CccCC-CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCHHHcC
Confidence 99975 68999999999999999999999999999999999999999999999988889999999999999999 68999
Q ss_pred Eeh
Q psy12877 687 YDE 689 (814)
Q Consensus 687 y~e 689 (814)
|.|
T Consensus 318 ~ie 320 (401)
T 1ulq_A 318 LIE 320 (401)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 18
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=5.7e-46 Score=416.50 Aligned_cols=309 Identities=35% Similarity=0.546 Sum_probs=274.6
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
|++|+|||++||||+++.+.+++.++.+|+.+|+++||+|+|+++++||.+++|++.+...+++.++.++..+|++...|
T Consensus 4 m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p 83 (394)
T 3ss6_A 4 MHNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVT 83 (394)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCE
T ss_pred CceEEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCce
Confidence 67899999999999999888889999999999999999999999999999999998776667789999999999987789
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCccccccccccccccccccccHHHH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
+++++++|+|++.+|+.|+++|++|++|++|++|+|+|++.|+... ++....+.....+... +.+.+++....|++.
T Consensus 84 ~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~ 162 (394)
T 3ss6_A 84 GYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVW-EVLEDPIHHIMMGET 162 (394)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHH-HHTBCTTTCCBHHHH
T ss_pred EEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccc-cccccccccchHHHH
Confidence 9999999999999999999999999999999999999998876432 1222222222222221 444556667789999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKE 613 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~ 613 (814)
|++||++||+|||+||+|+++||+||.++...++|++||+|++++++++. .+++.|+.+| ++|+|++.++||+|++
T Consensus 163 a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~--~~~~~d~~~R~~~t~e~~~~~~pvf~~- 239 (394)
T 3ss6_A 163 AENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKE--VVFSKDEHPRADITAEKLAGLKPAFRK- 239 (394)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCE--EEECSCCCCCTTCCHHHHHTCCBSSST-
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCc--eeecccccccCCCCHHHHhhCCCccCC-
Confidence 99999999999999999999999999996667999999999999887764 4678999998 7999999999999986
Q ss_pred CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
.+++|++|||+++|||+++||++++.|++++.+|+++|+|++..+.+|..++.++..+++++|+++|+ .+|++|.|
T Consensus 240 ~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ve 316 (394)
T 3ss6_A 240 DGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADLLE 316 (394)
T ss_dssp TCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred CCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 68999999999999999999999999999999999999999998889988888999999999999999 68999998
No 19
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=100.00 E-value=4.5e-46 Score=417.67 Aligned_cols=311 Identities=42% Similarity=0.666 Sum_probs=275.0
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
|++|+|||++||||+++.+.+++.++.+|+.+|+++||+|+|+++++||.+++|++.+...++++++.++..+|++...|
T Consensus 4 m~~v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p 83 (395)
T 4e1l_A 4 MKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVP 83 (395)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSC
T ss_pred CCeEEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCce
Confidence 67899999999999999888999999999999999999999999999999999998877677889999999999987789
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccC--CCccCCCCccccccccccccccccccccHHHH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNC 534 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~ 534 (814)
+++++++|+|++.+|+.|+++|++|.+|+||++|+|+|++.|+... ++....+.....+.+..+.+.+++....|++.
T Consensus 84 ~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 163 (395)
T 4e1l_A 84 SYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGIT 163 (395)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHH
T ss_pred EEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHHH
Confidence 9999999999999999999999999999999999999998775331 11111222222333344555666666789999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccC
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKE 613 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~ 613 (814)
|++||++||+|||++|+|+++||+||.++...++|++||+|++++++++.+ ++++.|+.+| ++|+|++.++||+|.+
T Consensus 164 a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~-~~~~~d~~~r~~~t~e~l~~~~~v~~~- 241 (395)
T 4e1l_A 164 AENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKI-ETIDKDEYPKLGMTFEGLSKLKPAFKK- 241 (395)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEE-EEECSCSCCCTTCCHHHHHHCCBSSST-
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcc-eEECCccccCCCCCHHHHhhCCCccCC-
Confidence 999999999999999999999999999977789999999999998777653 4578899998 7999999999999986
Q ss_pred CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 614 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 614 ~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
.+|+|++|||+++|||+++||++++.|++++.+|+++|.|++..+++|..++.++..+++++|+++|+ .+||+|.|
T Consensus 242 ~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve 318 (395)
T 4e1l_A 242 DGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLIE 318 (395)
T ss_dssp TCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred CCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 79999999999999999999999999999999999999999999899999999999999999999999 68999998
No 20
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=100.00 E-value=1.3e-45 Score=412.30 Aligned_cols=301 Identities=30% Similarity=0.396 Sum_probs=266.6
Q ss_pred CCceeEeceeecccccCC-CCCCCCCHHHHHHHHHHHHHHHc-CCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCCC
Q psy12877 377 PGDVFIVSGSRTPMGSFR-SSLVSLSATKLGAVAIESAIQKA-NMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLPK 453 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~-g~~~~~~~~eLa~~A~~~AL~dA-Gl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~~ 453 (814)
|++|+|||++||||+++. |.+++.++.+|+.+|+++||+|+ |+++++||.+++|++.+... +++.++.++..+|++.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 568999999999999987 89999999999999999999999 99999999999999877665 7789999999999987
Q ss_pred CccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHH
Q psy12877 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGN 533 (814)
Q Consensus 454 ~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 533 (814)
..|+++++++|+|++.+|+.|+++|++|++|++|++|+|+|++.|+... .+ . .+ .++.+.+++ ...|++
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~-----~~---~-~~-~~~~~~~~~-~~~~g~ 149 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHG-----VD---F-HP-GLSRNVAKA-AGMMGL 149 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTT-----BC---C-CT-TCC--------CCCHH
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccc-----cC---c-Cc-ccccccccc-cccHHH
Confidence 7899999999999999999999999999999999999999998876411 11 0 01 122333333 567999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhcccccccc
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQK 612 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~ 612 (814)
.|++||++||+|||+||+|+++||+||.++...++|+++|+|+++++++++. ..++.|+.+| ++|+|+|.++||+|.+
T Consensus 150 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~-~~~~~d~~~r~~~t~e~l~~~~p~f~~ 228 (387)
T 3goa_A 150 TAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVL-KQFNYDEVIRPETTVEALSTLRPAFDP 228 (387)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCE-EEECSCTTCCTTCCHHHHTTSCCSSCT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcc-cccccccccCCCCCHHHHhcCCCcccC
Confidence 9999999999999999999999999999966677999999999998877653 4579999998 6999999999999974
Q ss_pred CCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 613 ~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+.+++|++|||+++|||+++||+|++.|+++|.+|+++|+|++..+++|..++.++..+++++|+++|+ .+|++|.|
T Consensus 229 ~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve 306 (387)
T 3goa_A 229 VSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFE 306 (387)
T ss_dssp TTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred CCCceecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 357899999999999999999999999999999999999999999999999999999999999999999 68999998
No 21
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=100.00 E-value=1.7e-45 Score=412.58 Aligned_cols=310 Identities=38% Similarity=0.626 Sum_probs=266.3
Q ss_pred CCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc
Q psy12877 377 PGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV 456 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~ 456 (814)
|++|+|||++||||+++.|.+++.++.+|+.+|+++||+|+|+++++||.+++|++.+...++++++.++..+|++...|
T Consensus 2 m~~v~Ivg~~~t~~g~~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 81 (392)
T 2vu1_A 2 TPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT 81 (392)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE
T ss_pred CCCEEEEEeeecCcccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCce
Confidence 57899999999999999999999999999999999999999999999999999998776667789999999999985589
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccc-cCCCccCCCCccccccccccccccccccccHHHHH
Q psy12877 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFY-LNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCA 535 (814)
Q Consensus 457 ~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~A 535 (814)
.++++++|+||+.||..|+++|++|++|+||++|+|+|+..|+. ..+.....+.....+.....++..++....|+++|
T Consensus 82 ~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 161 (392)
T 2vu1_A 82 AWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTA 161 (392)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHH
T ss_pred EEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHHH
Confidence 99999999999999999999999999999999999999887652 00111111100001111112233333445799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccccCC
Q psy12877 536 ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKEN 614 (814)
Q Consensus 536 e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~~~~ 614 (814)
++||++||+|||++|+|+++||+||.++...++|++||+|+++++++++ ..+++|+.+| ++|+|++.++||+|.+ +
T Consensus 162 ~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~--~~f~~d~~~r~~~t~e~~~~~~~v~~~-~ 238 (392)
T 2vu1_A 162 ENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGD--ITVDADEYIRHGATLDSMAKLRPAFDK-E 238 (392)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCC--EEECSCSSCCTTCCHHHHHTCCCSSCT-T
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCc--eeeccccccCCCCCHHHHhcCCCccCC-C
Confidence 9999999999999999999999999994445799999999998776664 3679999998 7999999999999964 6
Q ss_pred CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 615 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 615 ~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+++|++|||+++|||+++||+|+++|+++|.+|+++|+|++..+++|..++.++..|++++|+++|+ .+||+|.|
T Consensus 239 g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ie 314 (392)
T 2vu1_A 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVE 314 (392)
T ss_dssp CCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred CCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEEE
Confidence 9999999999999999999999999999999999999999999988988888999999999999999 68999998
No 22
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=100.00 E-value=2.1e-45 Score=411.14 Aligned_cols=306 Identities=30% Similarity=0.442 Sum_probs=263.0
Q ss_pred cccCCCCceeEeceeecccccC-CCCCCCCCHHHHHHHHHHHHHHHcC----CCCcCcceEEEEecccCCCCChHHHHHH
Q psy12877 372 NFASKPGDVFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQKAN----MDKSDVQEVYMGNVCQAGLGQAPCRQAV 446 (814)
Q Consensus 372 ~~~~~~~~V~IvG~~rTp~~~~-~g~~~~~~~~eLa~~A~~~AL~dAG----l~~~dID~vivG~~~~~~~~~~~a~~~a 446 (814)
.+.+.|++|+|||++||||+++ .|.+++.++.+|+.+|+++||+|+| +++++||.+++|+..+...++++++.++
T Consensus 4 ~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va 83 (393)
T 1afw_A 4 LLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAAC 83 (393)
T ss_dssp TTSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHH
T ss_pred hhhhcCCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHH
Confidence 3456678999999999999998 5899999999999999999999999 9999999999998876555567899999
Q ss_pred HHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccc
Q psy12877 447 IFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVY 526 (814)
Q Consensus 447 ~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (814)
..+|++...|+++++++|+||+.||..|+++|++|++|++|++|+|+|++.|+...+. +. ...+.+...++ .+.
T Consensus 84 ~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~---~~--~~~~~~~~~g~-~~~ 157 (393)
T 1afw_A 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPL---GM--ISSEELQKNRE-AKK 157 (393)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTT---CS--CCCHHHHHCTT-GGG
T ss_pred HHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCccccccc---cc--ccchhhhhccc-ccc
Confidence 9999976789999999999999999999999999999999999999998766532110 00 00000111122 222
Q ss_pred ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhc
Q psy12877 527 NKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKS 605 (814)
Q Consensus 527 ~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~ 605 (814)
....|+++|++||++||+|||+||+|+++||+||.++...++|++||+|+++++ +. ++++|+.+| ++|+|++.+
T Consensus 158 ~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~--~~---~~~~d~~~r~~~t~e~~~~ 232 (393)
T 1afw_A 158 CLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD--GS---ICQSDEGPRPNVTAESLSS 232 (393)
T ss_dssp GGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT--SC---EECSCSSCCSCCCHHHHHH
T ss_pred cchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC--Cc---eeccccccCCCCCHHHHhc
Confidence 335799999999999999999999999999999998445679999999998765 32 579999988 799999999
Q ss_pred cccccccCC-CccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-Cc
Q psy12877 606 LATVFQKEN-GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LS 683 (814)
Q Consensus 606 ~~p~f~~~~-~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~s 683 (814)
+||+|++ . ||+|++|||+++|||++|||+|+++|+++|.+|+++|+|++..+++|..++.++..|++++|+++|+ .+
T Consensus 233 ~rpvf~~-~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~ 311 (393)
T 1afw_A 233 IRPAFIK-DRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQ 311 (393)
T ss_dssp CCBSCC----CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGG
T ss_pred CCCcccC-CCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCCHH
Confidence 9999974 4 7999999999999999999999999999999999999999999999988888999999999999999 68
Q ss_pred ceeEeh
Q psy12877 684 QFWYDE 689 (814)
Q Consensus 684 q~~y~e 689 (814)
||+|.|
T Consensus 312 dId~ve 317 (393)
T 1afw_A 312 DIDIFE 317 (393)
T ss_dssp GCSEEE
T ss_pred HCCEEE
Confidence 999998
No 23
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=100.00 E-value=2.1e-45 Score=415.48 Aligned_cols=303 Identities=30% Similarity=0.469 Sum_probs=260.2
Q ss_pred CCCceeEeceeecccccCC-CCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCC-CCChHHHHHHHHcCCCC
Q psy12877 376 KPGDVFIVSGSRTPMGSFR-SSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAG-LGQAPCRQAVIFAGLPK 453 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~~~-g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~-~~~~~a~~~a~~~Gl~~ 453 (814)
.|++|||||++||||+++. |.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+.. .++++++.++..+|++.
T Consensus 28 ~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~ 107 (442)
T 2wu9_A 28 YGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 107 (442)
T ss_dssp GGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCT
T ss_pred cCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCC
Confidence 3578999999999999985 889999999999999999999999999999999999875432 13467889999999976
Q ss_pred CccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHH
Q psy12877 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGN 533 (814)
Q Consensus 454 ~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 533 (814)
..|+++++++|+||+.||..|+++|++|++|+||++|+|+|+..|+.... . ..+....+++ .++....|++
T Consensus 108 ~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~---~-----~~~~~~~~~~-~~~~~~~mg~ 178 (442)
T 2wu9_A 108 TVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEG---S-----VNPAVKKFAQ-AQNCLLPMGV 178 (442)
T ss_dssp TSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCS---C-----CCGGGGGCHH-HHHTTSCHHH
T ss_pred CceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccc---c-----cchhhhhccc-cccchhHHHH
Confidence 78999999999999999999999999999999999999999987652110 0 0011111111 2333457999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhc-CCccccccceecc--CCC-C-CcceEeccCCccc-cCCHHHhhccc
Q psy12877 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKN-NVFSSQIVPVSIP--QRK-G-KADIIVNEDEEYK-KINFEKFKSLA 607 (814)
Q Consensus 534 ~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~-a~~~~ei~p~t~~--~~~-~-s~~i~~~~D~~~~-~~~~e~l~~~~ 607 (814)
+|++||++||+|||+||+|+++||+||.. ||. ++|++||+|++++ +.+ + ...+++++||.+| ++|+|+|.++|
T Consensus 179 ~A~~~~~~~gisre~~~~~A~~s~~~A~~-~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~r 257 (442)
T 2wu9_A 179 TSENVAQRFGVSRQEQDQAAVDSHRKAAA-ATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLK 257 (442)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHH-HHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHh-ChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCC
Confidence 99999999999999999999999999998 774 6999999999874 211 0 0125789999998 79999999999
Q ss_pred cccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-Cccee
Q psy12877 608 TVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 608 p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
|+|++ +||+|++|||+++|||++|||+|++.|+++|.+|+++|+|++..+++|..++.++..|++++|+++|+ .+||+
T Consensus 258 pvfd~-~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DId 336 (442)
T 2wu9_A 258 PVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDID 336 (442)
T ss_dssp CSSCT-TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCCGGGCC
T ss_pred CccCC-CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCCHHHCC
Confidence 99975 69999999999999999999999999999999999999999999999988889999999999999999 68999
Q ss_pred Eeh
Q psy12877 687 YDE 689 (814)
Q Consensus 687 y~e 689 (814)
|+|
T Consensus 337 ~iE 339 (442)
T 2wu9_A 337 LFE 339 (442)
T ss_dssp EEE
T ss_pred EEE
Confidence 997
No 24
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=100.00 E-value=3.4e-43 Score=394.54 Aligned_cols=300 Identities=30% Similarity=0.440 Sum_probs=242.3
Q ss_pred CCCceeEeceeeccccc-CCCCCCCCCHHHHHHHHHHHHHHH-cCCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCC
Q psy12877 376 KPGDVFIVSGSRTPMGS-FRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLP 452 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~-~~g~~~~~~~~eLa~~A~~~AL~d-AGl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~ 452 (814)
++++|+|||++||||+| +.|.+++.++.+|+.+|+++||+| +|+++++||.+++|++.+... ++++++.++..+|+|
T Consensus 5 m~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp 84 (407)
T 3svk_A 5 MSEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLP 84 (407)
T ss_dssp --CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCC
T ss_pred CCCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCC
Confidence 35789999999999995 788899999999999999999999 999999999999998876543 678999999999998
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHH
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMG 532 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg 532 (814)
...|+++++++|+||+.+|..|+++|++|++|+||++|+|+|++.|+..... .+ ..+. .+..++...+||
T Consensus 85 ~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~--~~----~~~~----~~~~~~~~~~~g 154 (407)
T 3svk_A 85 ETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGG--AW----ATDP----ETNYRIGFVPQG 154 (407)
T ss_dssp TTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-------------C----CCCT----TTCCCCCCHHHH
T ss_pred CCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCccccccc--cc----ccCc----hhhccccccCHH
Confidence 7899999999999999999999999999999999999999999887643211 00 0000 011123335799
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQ 611 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~ 611 (814)
+.|++++++||++||++|+|++.||++|..+..++.|++||+|++.+ ++ ...++.|+.+| ++|+|++.++||+|.
T Consensus 155 ~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~--~g--~~~~~pd~~~r~~~t~e~l~~~~~vf~ 230 (407)
T 3svk_A 155 IGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQ--NG--LVILDHDEHMRPDTTMEGLAKLKTAFD 230 (407)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECT--TS--CEEECSCTTCCTTCCHHHHHTSCBSCC
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecC--CC--ceeeCCccccCCCCCHHHHhhCCCeec
Confidence 99999999999999999999999999999999999999999999743 23 23578899998 799999999999996
Q ss_pred cC--------------------CCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhH
Q psy12877 612 KE--------------------NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFA 671 (814)
Q Consensus 612 ~~--------------------~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A 671 (814)
+. .+|+|++|||+++|||+++||+|++.|+++|.+|+++|+|++..+++|..++.++..|
T Consensus 231 ~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a 310 (407)
T 3svk_A 231 GVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPTPA 310 (407)
T ss_dssp -------------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHHHH
T ss_pred CCCccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHHHH
Confidence 41 2356999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCC-CcceeEeh
Q psy12877 672 IPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 672 ~~~~~~~~~~-~sq~~y~e 689 (814)
++++|+++|+ .+||+|.|
T Consensus 311 ~~~al~~Agl~~~dId~~e 329 (407)
T 3svk_A 311 TRKVLDRAGLTIDDIDLFE 329 (407)
T ss_dssp HHHHHHHHTCCGGGCSEEE
T ss_pred HHHHHHHcCCCHHHCCEEE
Confidence 9999999999 68999997
No 25
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=100.00 E-value=3.5e-43 Score=396.10 Aligned_cols=301 Identities=30% Similarity=0.462 Sum_probs=256.3
Q ss_pred CCceeEeceeecccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCc
Q psy12877 377 PGDVFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKST 455 (814)
Q Consensus 377 ~~~V~IvG~~rTp~~~~-~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~ 455 (814)
+++|+|||++||||+++ .+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+...+++.++.++..+|++...
T Consensus 29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~ 108 (418)
T 2iik_A 29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETV 108 (418)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTS
T ss_pred CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCc
Confidence 57899999999999985 46788899999999999999999999999999999998766544557888888999997678
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccc-ccccccccccccHHHH
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV-YDGLSDVYNKIHMGNC 534 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~mg~~ 534 (814)
|+++++++|+||+.||..|+++|++|++|+||++|+|+|++.|+.... .. .+.+. .+...+ ....|++.
T Consensus 109 p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~---~~-----~~~~~~~~~~~~--~~~~~g~~ 178 (418)
T 2iik_A 109 PLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPG---NI-----TSRLMEKEKARD--CLIPMGIT 178 (418)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC--------CC-----CTTGGGCHHHHG--GGSCHHHH
T ss_pred eEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCc---cc-----chhhhccccccc--ccccHHHH
Confidence 999999999999999999999999999999999999999987652110 00 00000 000111 12468999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhh-cCCccccccceecc--CCCCC-cceEeccCCccc-cCCHHHhhccccc
Q psy12877 535 AENTAKKFNISRDEQDEYALSSYKKSADAYK-NNVFSSQIVPVSIP--QRKGK-ADIIVNEDEEYK-KINFEKFKSLATV 609 (814)
Q Consensus 535 Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p-~a~~~~ei~p~t~~--~~~~s-~~i~~~~D~~~~-~~~~e~l~~~~p~ 609 (814)
++++|++||+|||+||+||++||+||.. || .++|+++|+|+++. +.++. +.+++++|+.+| .+|+|+|+++||+
T Consensus 179 a~~~a~~~gitre~~~~~a~~s~~~A~~-a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~v 257 (418)
T 2iik_A 179 SENVAERFGISREKQDTFALASQQKAAR-AQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPA 257 (418)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHH-HHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCS
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHh-ChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCc
Confidence 9999999999999999999999999998 66 69999999999763 22221 135688999998 6999999999999
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEe
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYD 688 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~ 688 (814)
|++ .+|+|++|||+++|||++|||+|+++|+++|.+|+++|+|++..+.+|..++.++..|++++|+++|+ .+||+|+
T Consensus 258 fd~-~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~v 336 (418)
T 2iik_A 258 FKK-DGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIF 336 (418)
T ss_dssp SST-TCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccC-CCceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCee
Confidence 986 57999999999999999999999999999999999999999998888988888999999999999999 6899999
Q ss_pred h
Q psy12877 689 E 689 (814)
Q Consensus 689 e 689 (814)
|
T Consensus 337 E 337 (418)
T 2iik_A 337 E 337 (418)
T ss_dssp E
T ss_pred e
Confidence 8
No 26
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=100.00 E-value=4.3e-45 Score=420.61 Aligned_cols=304 Identities=12% Similarity=0.067 Sum_probs=232.1
Q ss_pred CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 9 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 9 ~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.+.|++++++..+|++ ..|.++++.+|+|++++|++|+++|++|++|+||++|+|+||+.|+...... +.+.....+
T Consensus 89 ~~~~~~~~va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~-~~~~~~~~~- 165 (520)
T 4egv_A 89 VSSNYPRSVARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAEN-KPDHSETVD- 165 (520)
T ss_dssp --CCHHHHHHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC---------------------
T ss_pred cccCHHHHHHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecccccccccccc-ccCcccccc-
Confidence 3578999999999998 6899999999999999999999999999999999999999999887543211 000000000
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
.........|+..++++..+||+++++++.++..+|+++..+...+.|+++|.|+.++.++ ....++|+.+|+
T Consensus 166 -----~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~--~a~~np~a~~r~ 238 (520)
T 4egv_A 166 -----GQLEDRGYGYDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSK--VAAKNPYSSAPT 238 (520)
T ss_dssp --------------------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH--HHHHCTTSSSCC
T ss_pred -----ccccccccccchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEeccc--ccccCccccccC
Confidence 0011122345666777777888888888888888887777776666777777777665443 124578889999
Q ss_pred CCCHHhhhcCCceeccC-CCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC--------CCc
Q psy12877 169 KINFEKFKSLATVFQKE-NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF--------PIA 239 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~-~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~--------~~~ 239 (814)
++|+|++.+++|.++.- ++..|++|||+++|||+|+||+|+++|+++|++|+++|.+++....+|..+ ..+
T Consensus 239 ~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~ 318 (520)
T 4egv_A 239 ERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPA 318 (520)
T ss_dssp CCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHH
T ss_pred CCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChH
Confidence 99999999877766432 244578999999999999999999999999999999999998877655444 335
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC---CcccCCCCccccCCCCChHHHHHHHHHHHHHc-
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS---KVNVHGGAVSLGHPIGMSGARIVIHLCHALKS- 315 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~---~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~- 315 (814)
+..+++++|+++||+++|||+||+||||++++++++|+||||++ |+|++||++++|||++++|++.++++++|||+
T Consensus 319 ~~~a~~~al~~agl~~~did~~E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~ 398 (520)
T 4egv_A 319 SVTAVNEALRVAGIGLDDVAAFDLYSCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDK 398 (520)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECCSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEEeCCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcC
Confidence 67899999999999999999999999999999999999999764 89999999999999999999999999999998
Q ss_pred -CCCCCcc
Q psy12877 316 -GQKGQLS 322 (814)
Q Consensus 316 -g~~gl~~ 322 (814)
++++|.+
T Consensus 399 ~~~~~L~~ 406 (520)
T 4egv_A 399 PGQFALVG 406 (520)
T ss_dssp TTCEEEEE
T ss_pred CCCceEEe
Confidence 7777765
No 27
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=100.00 E-value=6.6e-43 Score=391.13 Aligned_cols=302 Identities=28% Similarity=0.405 Sum_probs=261.0
Q ss_pred CCCceeEeceeecccccC-CCCCCCCCHHHHHHHHHHHHHHHc-CCCCcCcceEEEEecccCCC-CChHHHHHHHHcCCC
Q psy12877 376 KPGDVFIVSGSRTPMGSF-RSSLVSLSATKLGAVAIESAIQKA-NMDKSDVQEVYMGNVCQAGL-GQAPCRQAVIFAGLP 452 (814)
Q Consensus 376 ~~~~V~IvG~~rTp~~~~-~g~~~~~~~~eLa~~A~~~AL~dA-Gl~~~dID~vivG~~~~~~~-~~~~a~~~a~~~Gl~ 452 (814)
.|++|+|||++||||+++ +|.+++.++.+|+.+|+++||+|+ |+++++||.+++|+..+... +.++++.++..+|++
T Consensus 3 ~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~ 82 (390)
T 1wdk_C 3 NPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIP 82 (390)
T ss_dssp CTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSC
T ss_pred CCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCC
Confidence 357899999999999998 688889999999999999999999 99999999999998876544 467899999999997
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHH
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMG 532 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg 532 (814)
...|.++++++|+||+.||+.|+++|++|++|++|++|+|+++..|..... +... .+..+. +.....|+
T Consensus 83 ~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~----~~~~----~~~~~~---~~~~~~~g 151 (390)
T 1wdk_C 83 HTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGV----DPNP----HMSLYA---AKASGMMG 151 (390)
T ss_dssp TTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTB----CCCG----GGGGTS---CGGGGSHH
T ss_pred CCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCccccc----ccCc----cccccC---CcchhHHH
Confidence 778999999999999999999999999999999999999999877653211 0000 000011 11224599
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc-cCCHHHhhccccccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQ 611 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~-~~~~e~l~~~~p~f~ 611 (814)
+.|++||++||+|||++|+|+++||+||..+...+.|.+||+|++++++.++ ...+++|+.+| ++|+|++.++||+|.
T Consensus 152 ~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~-~~~fd~d~~~r~~~t~e~~~~~~~i~~ 230 (390)
T 1wdk_C 152 LTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGF-LKIFDYDETIRPDTTLESLAALKPAFN 230 (390)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCC-EEEECSCTTCCTTCCHHHHHTSCCSSC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCc-ceeeccccccCCCCCHHHHhcCCCccc
Confidence 9999999999999999999999999999996667889999999987655443 13578999988 799999999999995
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCCchHHhHHHHHHHhcCC-CcceeEeh
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~~g~~~A~~~~~~~~~~-~sq~~y~e 689 (814)
+.+|.+|++|||+++|||++|||+|+++|+++|.+|+++|+|++..+++|..++.++..+++++|+++|+ .+||+|.|
T Consensus 231 p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve 309 (390)
T 1wdk_C 231 PKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIE 309 (390)
T ss_dssp TTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred CCCCcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCcEEE
Confidence 3257799999999999999999999999999999999999999999988888888999999999999999 68999997
No 28
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=100.00 E-value=9.2e-37 Score=351.32 Aligned_cols=309 Identities=13% Similarity=0.044 Sum_probs=206.7
Q ss_pred ccccC--CCCceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccC------------C
Q psy12877 371 RNFAS--KPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQA------------G 436 (814)
Q Consensus 371 ~~~~~--~~~~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~------------~ 436 (814)
+.|.. .++..||||+++||+.+..|.++++++.||+.+|+++||+|+||++++||.++.|++... +
T Consensus 9 ~~ma~mvdPRtPVIVGvG~t~~r~~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g 88 (520)
T 4egv_A 9 HHMASMVDPRTPVIVGVGQFTERIDLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLG 88 (520)
T ss_dssp ------CCTTCEEEEEEEEEEC--------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC------------
T ss_pred hhhhccCCCCCeEEEEeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhc
Confidence 44443 456789999999999888888889999999999999999999999999888776654321 1
Q ss_pred CCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccc
Q psy12877 437 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 516 (814)
Q Consensus 437 ~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~ 516 (814)
...++++.++..+|++ ..+.++++.+|+||+++|+.|+++|++|++|+||++|+|+||+.|+....... ........
T Consensus 89 ~~~~~~~~va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~-~~~~~~~~- 165 (520)
T 4egv_A 89 VSSNYPRSVARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENK-PDHSETVD- 165 (520)
T ss_dssp --CCHHHHHHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC---------------------
T ss_pred cccCHHHHHHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccc-cCcccccc-
Confidence 2346788999999998 57899999999999999999999999999999999999999998864321110 00000000
Q ss_pred ccccccccccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccc
Q psy12877 517 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 596 (814)
Q Consensus 517 ~~~~~~~~~~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~ 596 (814)
.........|+..+++++.+||+++++++.++..+|+++..+...+.|+++|.|+.++.+... ..+.|+.+|
T Consensus 166 -----~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a---~~np~a~~r 237 (520)
T 4egv_A 166 -----GQLEDRGYGYDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVA---AKNPYSSAP 237 (520)
T ss_dssp --------------------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH---HHCTTSSSC
T ss_pred -----ccccccccccchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEeccccc---ccCcccccc
Confidence 000111223444555566666666666666666666666655555556666666554332211 123344444
Q ss_pred -cCCHHHhhccccccccCCCcc-ccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCC--------Cc
Q psy12877 597 -KINFEKFKSLATVFQKENGTV-TAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF--------PI 666 (814)
Q Consensus 597 -~~~~e~l~~~~p~f~~~~~pl-t~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~--------~~ 666 (814)
++|+|++.+++|.|..-.+|+ |++|||+++|||+|+||+|+++|+++|++|+++|++++.++.+|..+ +.
T Consensus 238 ~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~ 317 (520)
T 4egv_A 238 TERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASP 317 (520)
T ss_dssp CCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCH
T ss_pred CCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccCh
Confidence 578999999999886433554 88999999999999999999999999999999999998887765544 34
Q ss_pred hHHhHHHHHHHhcCC-CcceeEehh
Q psy12877 667 APAFAIPTLLKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 667 g~~~A~~~~~~~~~~-~sq~~y~e~ 690 (814)
++..|++++|+++|+ .+|+|++|-
T Consensus 318 ~~~~a~~~al~~agl~~~did~~E~ 342 (520)
T 4egv_A 318 ASVTAVNEALRVAGIGLDDVAAFDL 342 (520)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEE
Confidence 667899999999999 689999973
No 29
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=99.93 E-value=2.4e-25 Score=251.64 Aligned_cols=251 Identities=18% Similarity=0.189 Sum_probs=187.7
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
....+..++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|++....
T Consensus 154 ~~~~a~~is~~lgl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~------------------- 212 (428)
T 3kzu_A 154 INLASGHVSIKHKLR--GPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRI------------------- 212 (428)
T ss_dssp TTHHHHHHHHHHTCC--SCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHH-------------------
T ss_pred hhhHHHHHHHHcCCC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHH-------------------
Confidence 345788999999994 69999999999999999999999999999999999999853210
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
.+..+. ..+.+.. +.
T Consensus 213 ------------------------------~~~~~~-----------~~~~ls~-------------------~~----- 227 (428)
T 3kzu_A 213 ------------------------------SLAGFA-----------ACKALST-------------------ER----- 227 (428)
T ss_dssp ------------------------------HHHHHH-----------HTTCBCC-------------------SC-----
T ss_pred ------------------------------HHHHHH-----------Hcccccc-------------------Cc-----
Confidence 000000 0111110 00
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHH
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAI 244 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~ 244 (814)
..+.-..++|+..+ .++..++|||+|+||+++++|++++.+|+++|.|++...+ .|...+.+...++
T Consensus 228 -~~~~~~~~~pfd~~-------~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai 299 (428)
T 3kzu_A 228 -NDDPTAASRPYDED-------RDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCM 299 (428)
T ss_dssp -TTSGGGTCCTTBTT-------CCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHH
T ss_pred -cCCcccccCCcccC-------CCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHH
Confidence 00111233444322 4666789999999999999999999999999999998774 4555556778999
Q ss_pred HHHHHHcCCCCCCccEEecCCCchHHHHHHhh----hcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----C
Q psy12877 245 PTLLKNGGVAKQDVALWEINEAFSVVVLANIK----KLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----G 316 (814)
Q Consensus 245 ~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e----~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g 316 (814)
+++|+++|++++|||++|+|++++......++ .+|...+++|++|++.++|||.|++|+..++++++||++ .
T Consensus 300 ~~al~~Agl~~~dId~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp 379 (428)
T 3kzu_A 300 VAALKRAGIVPDEIDYINAHGTSTMADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPA 379 (428)
T ss_dssp HHHHHHHTCCGGGCCEEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHHHcCCCHHHeeEEEecCCcchhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCC
Confidence 99999999999999999999988854444444 456666799999999999999999999999999999997 2
Q ss_pred CCCCcc---------ccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 317 QKGQLS---------QFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 317 ~~gl~~---------~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
...+.. ..+...+...+++..+.++.||.+.+++|+..
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 426 (428)
T 3kzu_A 380 TLNLDNPAAQTRIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRRY 426 (428)
T ss_dssp BTTCSSBSSCCSSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCcccChhhEEEEEeec
Confidence 221111 11111222356788888899999999999864
No 30
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.93 E-value=1.3e-25 Score=252.70 Aligned_cols=247 Identities=21% Similarity=0.243 Sum_probs=185.9
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+. .|+++|+++|+|++.||.+|+++|++|++|++||+|+|.+.. |..
T Consensus 139 ~~a~~ia~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~------------------- 196 (408)
T 1j3n_A 139 MASAHIAMRYGFT--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT-PMA------------------- 196 (408)
T ss_dssp HHHHHHHHHHTCC--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHH-------------------
T ss_pred HHHHHHHHHhCCC--CceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHH-------------------
Confidence 5789999999995 699999999999999999999999999999999999998533 100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
..+... .+.+.. . ..+
T Consensus 197 ----------~~~~~~------------------------------~~~ls~-------------------~-----~~~ 212 (408)
T 1j3n_A 197 ----------IGAFAV------------------------------MRALST-------------------R-----NEE 212 (408)
T ss_dssp ----------HHHHHH------------------------------TTCBCC-------------------C-----TTC
T ss_pred ----------HHHHHh------------------------------cccccC-------------------C-----CCC
Confidence 000000 111110 0 000
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
.+ ..++|+.. ..+++.++|||+++||++++.|++.|.+++++|.|++...+ .|...+.+...++++
T Consensus 213 p~--~~~~pfd~-------~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~ 283 (408)
T 1j3n_A 213 PE--KASRPFTL-------SRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMAR 283 (408)
T ss_dssp HH--HHCCTTBT-------TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHH
T ss_pred CC--cCcccCcC-------CCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHH
Confidence 11 12333331 24666789999999999999999999999999999998764 333445566889999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH-----HHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV-----VLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~-----~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
+|+++|++++|||++|+|++++.. .....+.||...+++|+++++..+||+.|++|+..+++++++|++ ..
T Consensus 284 al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~ 363 (408)
T 1j3n_A 284 ALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPT 363 (408)
T ss_dssp HHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCC
T ss_pred HHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999999975 455667788777789999999999999999999999999999997 22
Q ss_pred CCCccc-----cccCc---cccccccceeEEecCCcceeEEEec
Q psy12877 318 KGQLSQ-----FWYDE---NTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 318 ~gl~~~-----~~~~~---~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
..+... +.+.+ ....+++..+.++.||.+.+++|++
T Consensus 364 ~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 364 INLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp TTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred CCCCCCCCCCCcccCCCCcCCCCCEEEEecccCCcceEEEEEec
Confidence 222111 01111 1124677888888899999999985
No 31
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=99.92 E-value=6.3e-25 Score=248.39 Aligned_cols=248 Identities=20% Similarity=0.198 Sum_probs=187.2
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++..++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++....
T Consensus 155 ~~~a~~is~~lgl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~------------------- 213 (427)
T 3ho9_A 155 NMVAGHLTIMYGLR--GPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLG------------------- 213 (427)
T ss_dssp THHHHHHHHHHTCC--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH-------------------
T ss_pred hHHHHHHHHHhCCC--CCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHH-------------------
Confidence 34788999999994 799999999999999999999999999999999999999864110
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+..+ . ..+.+.. .++
T Consensus 214 ------------------------------~~~~-----~------~~~~ls~------------------~~~------ 228 (427)
T 3ho9_A 214 ------------------------------VGGF-----G------AARALST------------------RND------ 228 (427)
T ss_dssp ------------------------------HHHH-----H------HTTCBCC------------------CTT------
T ss_pred ------------------------------HHHH-----H------hccCccc------------------CCC------
Confidence 0000 0 0011100 000
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~ 245 (814)
+ .-..++|+..+ .++..++|||+++||++++.|++++.+++++|.|++...+ .|...+.+...+++
T Consensus 229 ~--~~~~~~pfd~~-------~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~ 299 (427)
T 3ho9_A 229 N--PQAASRPWDKE-------RDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMA 299 (427)
T ss_dssp C--HHHHCCTTBTT-------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHH
T ss_pred C--CCcccCCccCC-------CCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHH
Confidence 0 01134444422 3455589999999999999999999999999999998765 34445667788999
Q ss_pred HHHHHcCCCCCCccEEecCCCchH-----HHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----C
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSV-----VVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----G 316 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~-----~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g 316 (814)
++|+++||+++|||++|+|.+++. ......+.||...+++|++|++..+|||.||+|+..+++++++|++ .
T Consensus 300 ~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp 379 (427)
T 3ho9_A 300 NALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPP 379 (427)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999966664 5566667788877899999999999999999999999999999997 1
Q ss_pred CCCCccc-----cccCccc-----cccccceeEEecCCcceeEEEec
Q psy12877 317 QKGQLSQ-----FWYDENT-----TQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 317 ~~gl~~~-----~~~~~~~-----~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
...+... +.+.+.+ ..+++..+.++.||.+.+++|++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 380 TINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp BTTCSSBCTTCCCBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCCccccccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 1111110 0111111 34677888889999999999975
No 32
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.92 E-value=8.7e-25 Score=246.18 Aligned_cols=245 Identities=19% Similarity=0.170 Sum_probs=183.0
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
..+..++..+|+ ..|+++++++|+|++.||.+|+++|++|++|++||+|+|.++....
T Consensus 149 ~~a~~ia~~lgl--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~-------------------- 206 (416)
T 2wge_A 149 GAAAVIGLQLGA--RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALP-------------------- 206 (416)
T ss_dssp HHHHHHHHHHTC--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHH--------------------
T ss_pred hHHHHHHHHhcc--CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHH--------------------
Confidence 468889999999 4799999999999999999999999999999999999998765210
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
..+. + ..+.+.. ++ .+
T Consensus 207 ----------~~~~----------------------~--------~~~~l~~---------~~---------------~~ 222 (416)
T 2wge_A 207 ----------IAAF----------------------S--------MMRAMST---------RN---------------DE 222 (416)
T ss_dssp ----------HHHH----------------------H--------TTTCBCC---------CT---------------TS
T ss_pred ----------HHHH----------------------H--------hcchhhc---------cc---------------cC
Confidence 0000 0 0111110 00 00
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
.+ ...+|+. ...+++.++|||+|+||++++.|+++|.+++++|.|++...+ .|...+.++..++++
T Consensus 223 ~~--~~~~pfd-------~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~ 293 (416)
T 2wge_A 223 PE--RASRPFD-------KDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTR 293 (416)
T ss_dssp GG--GSCCTTB-------TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHH
T ss_pred Cc--ccccccc-------cCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHH
Confidence 01 0122322 134677899999999999999999999999999999998764 344455677889999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH----HHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV----VLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQK 318 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~----~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~ 318 (814)
+|+++|++++|||+||+|++++.. +...++.++. .++++++++..+|||.|++|+..++++++||++ ...
T Consensus 294 al~~agl~~~dId~ve~HgtgT~~gD~~E~~al~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~ 371 (416)
T 2wge_A 294 SLELAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGC--DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTL 371 (416)
T ss_dssp HHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHTTC--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCT
T ss_pred HHHHcCCCHHHCCEEEECCCCCcCCCHHHHHHHHHhcc--CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCC
Confidence 999999999999999999999975 5656666643 268888899999999999999999999999997 222
Q ss_pred CCccc-----cccCc----cccccccceeEEecCCcceeEEEec
Q psy12877 319 GQLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 319 gl~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
.+... +.+.+ ....+++..+.++.||.+.+++|+.
T Consensus 372 ~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 372 NYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp TCCSBCTTTCCEECCSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCcccCCCCCccCCCCEEEEeCcccCceeEEEEEEe
Confidence 22111 01111 1235677888888899999999975
No 33
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.92 E-value=2.3e-24 Score=243.76 Aligned_cols=248 Identities=20% Similarity=0.168 Sum_probs=178.3
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++..++..+|+. .|+++|+++|+|++.||.+|+++|++|++|++||+|+|.++....
T Consensus 165 ~~a~~is~~lgl~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-------------------- 222 (434)
T 2gp6_A 165 GAAAAVGLERHAK--AGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVP-------------------- 222 (434)
T ss_dssp HHHHHHHHHSCCC--SCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHH--------------------
T ss_pred hHHHHHhhhhcCC--CCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH--------------------
Confidence 4788999999994 799999999999999999999999999999999999999765100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
++..++.++ .+.. +++ .++.
T Consensus 223 --------------------------------~~~~~~~~~-------~ls~---------~~~-----~p~~------- 242 (434)
T 2gp6_A 223 --------------------------------IAGFAQMRI-------VMST---------NND-----DPAG------- 242 (434)
T ss_dssp --------------------------------HHHHHTTTS-------SCCC---------CTT-----CTTT-------
T ss_pred --------------------------------HHHHHHHHH-------HhcC---------CCC-----CCCC-------
Confidence 000000000 0000 000 0111
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
..+|+.. ..+++.++|||+|+||++++.|++.+.+++++|.|++...+ .|...+.+...++++
T Consensus 243 -----~~~pfd~-------~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~ 310 (434)
T 2gp6_A 243 -----ACRPFDR-------DRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITR 310 (434)
T ss_dssp -----SCCSSBT-------TCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHH
T ss_pred -----ceecccc-------cCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHH
Confidence 1233321 24566799999999999999999999999999999998764 333344566889999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH-HHHHhhhcC--CCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcC----CCC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV-VLANIKKLD--IDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG----QKG 319 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~-~l~~~e~lg--~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g----~~g 319 (814)
+|+++|++++|||++|+|...+.. ..+.+++|+ |..+++|++|++.++|||.|++|+..++++++||+++ ...
T Consensus 311 al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~fg~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~ 390 (434)
T 2gp6_A 311 AIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLN 390 (434)
T ss_dssp HHHHTTCCTTTEEEEECCCCSCHHHHHHHHHHHHHHHTTCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSS
T ss_pred HHHHcCCCHHHcCEEEEeCCcCccchHHHHHHHHHHhccCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCC
Confidence 999999999999999999544432 233333332 2234899999999999999999999999999999972 111
Q ss_pred Cccc-----cccCc----cccccccceeEEecCCcceeEEEec
Q psy12877 320 QLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 320 l~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
+... +.+.+ +...+++..+.++.||.+.+++|+.
T Consensus 391 ~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 391 LVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp CSSBCTTCCCEECCSSCCCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCccccCCCccCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 1110 01111 1135677888888999999999985
No 34
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=99.92 E-value=2.5e-24 Score=242.54 Aligned_cols=247 Identities=17% Similarity=0.178 Sum_probs=182.1
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++..++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.+......
T Consensus 142 ~~a~~ia~~lgl~--gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~------------------- 200 (413)
T 3o04_A 142 MGSGQVSIRFGAK--GINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSL------------------- 200 (413)
T ss_dssp HHHHHHHHHHTCC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHH-------------------
T ss_pred HHHHHHHHHhCCC--CcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHH-------------------
Confidence 3588999999994 6999999999999999999999999999999999999996441100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
.+ + ...+.+... .+++.
T Consensus 201 -----------~~-------------------~-----------~~~~~ls~~---------------~~p~~------- 217 (413)
T 3o04_A 201 -----------AG-------------------F-----------TANKALSLN---------------PDPET------- 217 (413)
T ss_dssp -----------HH-------------------H-----------HHTTCBCCC---------------CCTTT-------
T ss_pred -----------HH-------------------H-----------HhcccccCC---------------CCCCC-------
Confidence 00 0 001111100 00111
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
..+|+.. ..++..++|||+|+||++++.|++++.+++++|.|++...+ .|...+.+...++++
T Consensus 218 -----~~~pfd~-------~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~ 285 (413)
T 3o04_A 218 -----ACRPFDK-------DRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKM 285 (413)
T ss_dssp -----SCCTTBT-------TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHH
T ss_pred -----CcCCCcC-------CCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHH
Confidence 2233332 23555699999999999999999999999999999998765 233334556789999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
+|+++|++++|||++|+|++++.. +...+ +.++...+++|+++++..+|||.||+|+.++++++++|++ ..
T Consensus 286 al~~agl~~~dId~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~ 365 (413)
T 3o04_A 286 AIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPT 365 (413)
T ss_dssp HHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCB
T ss_pred HHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCC
Confidence 999999999999999999999862 23332 3345555689999999999999999999999999999997 11
Q ss_pred CCCccc-----cccC----ccccccccceeEEecCCcceeEEEecC
Q psy12877 318 KGQLSQ-----FWYD----ENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 318 ~gl~~~-----~~~~----~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
..+... +.+. .....+++..+.++.||.+.+++|++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~~ 411 (413)
T 3o04_A 366 IHLKNQDEVCDLDYVPNEAREANVNVVISNSFGFGGHNATLVFKRI 411 (413)
T ss_dssp TTCCSBCSSCCSCCCBSSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCceEEEEEEEeC
Confidence 111110 0111 122356778888999999999999864
No 35
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.91 E-value=9.8e-24 Score=238.58 Aligned_cols=246 Identities=14% Similarity=0.074 Sum_probs=181.3
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.+++++++..+|+ ..|+++|+++|+||+.||++|+++|++|++|+|||||+|+++..+..
T Consensus 159 ~~~a~~ia~~lgl--~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~------------------ 218 (428)
T 3mqd_A 159 STASATLATFFKI--KGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSV------------------ 218 (428)
T ss_dssp THHHHHHHHHTTC--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH------------------
T ss_pred cHHHHHHHHHcCC--CCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHH------------------
Confidence 4589999999999 47999999999999999999999999999999999999998752210
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
. + ...+.+.. +.
T Consensus 219 -------------~-------------------~-----------~~~~~ls~-------------------~~------ 230 (428)
T 3mqd_A 219 -------------L-------------------F-----------DAMGAMSS-------------------KY------ 230 (428)
T ss_dssp -------------H-------------------H-----------HHTTCBCC-------------------TT------
T ss_pred -------------H-------------------H-----------HHhhhhcc-------------------cc------
Confidence 0 0 00111100 00
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC---CCCcHHHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID---FPIAPAFAIPTL 247 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~---~~~~~~~a~~~a 247 (814)
..+.-...+|+... .++..++|||++|||++++.|+++|.+|+++|+|++...+.... .+.++..+++++
T Consensus 231 ~~~p~~~~rpfd~~-------~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~A 303 (428)
T 3mqd_A 231 NDTPSTASRAYDKN-------RDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMA 303 (428)
T ss_dssp TTSGGGSCCTTBTT-------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHH
T ss_pred cCCcccccCcccCC-------CCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHH
Confidence 00011123444322 34455889999999999999999999999999999998764322 456778999999
Q ss_pred HHHcCCCCCCccEEecCCCchHH-----HHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCC
Q psy12877 248 LKNGGVAKQDVALWEINEAFSVV-----VLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQK 318 (814)
Q Consensus 248 l~~aGl~~~DID~~e~~d~fa~~-----~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~ 318 (814)
|+ |++ +|||+||.|.+.+.. .....+.|+...+.+++++.+..+|||.||+|++.++.++++|++ ...
T Consensus 304 l~--gl~-~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~ 380 (428)
T 3mqd_A 304 LS--TVT-SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESA 380 (428)
T ss_dssp HT--TCC-SCCCEEECCCCSCHHHHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCT
T ss_pred Hh--CCc-cccCEEEEeCCCCCCcCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCC
Confidence 99 999 999999999998852 233345566544557888888889999999999999999999997 222
Q ss_pred CCccc-------cc---cCccccccccceeEEecCCcceeEEEecC
Q psy12877 319 GQLSQ-------FW---YDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 319 gl~~~-------~~---~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
.+... .+ ..+....+++..+.++.||.+.+++|+..
T Consensus 381 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~~~ 426 (428)
T 3mqd_A 381 HIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQRY 426 (428)
T ss_dssp TCSSBCGGGTTSCBCSSCEESCCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCcccccCCccCCccccCCCCEEEEecCcCCcceEEEEEeec
Confidence 22111 00 01113356788888899999999999864
No 36
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.91 E-value=2.6e-23 Score=236.56 Aligned_cols=248 Identities=19% Similarity=0.199 Sum_probs=181.7
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++..++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++....
T Consensus 170 ~~~a~~ia~~lgl~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~------------------- 228 (451)
T 4ddo_A 170 NLAAGQISIKHRFR--GPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVS------------------- 228 (451)
T ss_dssp THHHHHHHHHHTCC--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH-------------------
T ss_pred chHHHHHHHHhcCC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHH-------------------
Confidence 34678899999994 699999999999999999999999999999999999999654110
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+. .++ ..+.+... .
T Consensus 229 ------------~~------------------~~~-----------~~~~ls~~-------------------------~ 242 (451)
T 4ddo_A 229 ------------LG------------------GFA-----------AARALSTG-------------------------F 242 (451)
T ss_dssp ------------HH------------------HHH-----------HTTCBCCS-------------------------C
T ss_pred ------------HH------------------HHH-----------HHhhhccC-------------------------C
Confidence 00 000 01111100 1
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC------CCcHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF------PIAPAFAI 244 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~------~~~~~~a~ 244 (814)
+.+.....+|+..+ .+++.++|||+|+||++++.|++++.+|+++|.|++...+ +..+ +.+...++
T Consensus 243 ~~~~~~~~~pfd~~-------~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d-~~~~~~~~~~~~~~~~ai 314 (451)
T 4ddo_A 243 SEEPVRASRPFDRD-------RDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTAD-AYHMTAGPDDGSGAMRAM 314 (451)
T ss_dssp TTSGGGSCCTTBTT-------CCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-CSCSSCCCTTCHHHHHHH
T ss_pred CcCccccccccccC-------CCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecC-CCccCCCCCCHHHHHHHH
Confidence 11222334454422 4666789999999999999999999999999999999774 3222 22447899
Q ss_pred HHHHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----
Q psy12877 245 PTLLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS---- 315 (814)
Q Consensus 245 ~~al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~---- 315 (814)
+++|+++|++++|||++|+|++++.. ++..+ +.++. ..++++++.+..+|||.|++|+.++++++++|++
T Consensus 315 ~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~~al~~~~~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ip 393 (451)
T 4ddo_A 315 KLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGV-GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLP 393 (451)
T ss_dssp HHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHCS-SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEEC
T ss_pred HHHHHHcCCCHHHcCEEEecCCcCcccCHHHHHHHHHHhCC-CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcC
Confidence 99999999999999999999999863 33333 33454 4567888888889999999999999999999997
Q ss_pred CCCCCccc------cccC----ccccccccceeEEecCCcceeEEEecC
Q psy12877 316 GQKGQLSQ------FWYD----ENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 g~~gl~~~------~~~~----~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
....+... ..+. .....+++..+.++.||.+.+++|+..
T Consensus 394 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~ 442 (451)
T 4ddo_A 394 GTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRRY 442 (451)
T ss_dssp CCTTCSSBCGGGTTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEES
T ss_pred CCCCCCCCCcccccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeC
Confidence 22222110 0011 112356788888999999999999864
No 37
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=99.91 E-value=1.1e-23 Score=237.50 Aligned_cols=247 Identities=16% Similarity=0.135 Sum_probs=181.1
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccC-CCCCCccccCcccCCCCccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM-SNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~-s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.++.+++..+|+. .|+++|+++|+|++.||++|+++|++|++|+|||||+|.+ +...+
T Consensus 145 ~~a~~ia~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~------------------- 203 (416)
T 1e5m_A 145 MASGLTAINLGAK--GPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSY------------------- 203 (416)
T ss_dssp HHHHHHHHHHTCC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHH-------------------
T ss_pred HHHHHHHHHhCCC--CceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHH-------------------
Confidence 5899999999994 7999999999999999999999999999999999999984 32100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
.+ |. ..+.+... . .++++
T Consensus 204 ------------~~-------------------~~-----------~~~~ls~~---------~-----~~p~~------ 221 (416)
T 1e5m_A 204 ------------AG-------------------FA-----------SARALSFR---------N-----DDPLH------ 221 (416)
T ss_dssp ------------HH-------------------HH-----------HTTCBCCC---------T-----TCGGG------
T ss_pred ------------HH-------------------HH-----------HcCCccCC---------C-----CCCcc------
Confidence 00 00 01111100 0 00111
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~ 245 (814)
..+|+.. ..+++.++|||+++||++++.|++.+.+++++|.|++...+. |...+.+...+++
T Consensus 222 ------~~rpfd~-------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~ 288 (416)
T 1e5m_A 222 ------ASRPFDK-------DRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIA 288 (416)
T ss_dssp ------TCCTTBT-------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHH
T ss_pred ------ccccCcc-------CCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHH
Confidence 2333331 246677999999999999999999999999999999998764 4444556688999
Q ss_pred HHHHHcCCCCCCccEEecCCCchHH----HHH-HhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----C
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSVV----VLA-NIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----G 316 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~~----~l~-~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g 316 (814)
++|+++|++++|||++|+|++++.. ++. ..+.+|...+++++++.+..+||+.|++|+..+++++++|++ .
T Consensus 289 ~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp 368 (416)
T 1e5m_A 289 WALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPP 368 (416)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCC
Confidence 9999999999999999999998863 222 234455555578888888889999999999999999999997 1
Q ss_pred CCCCccc-----cccCc----cccccccceeEEecCCcceeEEEecC
Q psy12877 317 QKGQLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 317 ~~gl~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
...+... +.+.+ ....+++..+.++.||.+.+++|+..
T Consensus 369 ~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 369 TINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp BTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCCCCCccccCCccccCCCCEEEEccccCCCeeEEEEEEeC
Confidence 1111111 01111 11246777888888999999999863
No 38
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.91 E-value=1.3e-23 Score=236.64 Aligned_cols=245 Identities=16% Similarity=0.139 Sum_probs=178.3
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.+++.+++..+|+. .|+++|+++|+|++.||++|+++|++|++|+|||||+|.++..+...
T Consensus 145 ~~~a~~ia~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~----------------- 205 (412)
T 4ewg_A 145 HTTAVNVSLFWDLK--GRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAV----------------- 205 (412)
T ss_dssp THHHHHHHHHTTCC--SCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-----------------
T ss_pred cHHHHHHHHHhCCC--CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHH-----------------
Confidence 46899999999994 69999999999999999999999999999999999999966421100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
.. ..+.+... ..+++
T Consensus 206 --------------------------------------~~------~~~~l~~~--------------~~~p~------- 220 (412)
T 4ewg_A 206 --------------------------------------FD------TLYATSTR--------------NDEPH------- 220 (412)
T ss_dssp --------------------------------------HH------TTTCBCCC--------------TTCGG-------
T ss_pred --------------------------------------HH------HhhccccC--------------CCCCC-------
Confidence 00 00011000 00011
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC---CCCcHHHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID---FPIAPAFAIPTL 247 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~---~~~~~~~a~~~a 247 (814)
..++|+.. ..+++.++|||+++||++++.|++.+.+++++|.|++...+.... .+.+...+++++
T Consensus 221 -----~~~rpfd~-------~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~A 288 (412)
T 4ewg_A 221 -----LTPRPFDA-------KRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLA 288 (412)
T ss_dssp -----GCCCTTBT-------TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHH
T ss_pred -----CCCCCCCC-------CCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHH
Confidence 12233332 246677899999999999999999999999999999998763221 234567899999
Q ss_pred HHHcCCCCCCccEEecCCCchH----HHHHHhh-hcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCC
Q psy12877 248 LKNGGVAKQDVALWEINEAFSV----VVLANIK-KLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQK 318 (814)
Q Consensus 248 l~~aGl~~~DID~~e~~d~fa~----~~l~~~e-~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~ 318 (814)
|+++|++++|||++|.|.+.+. .+...++ .++ ++++++..+..+|||.||+|+.+++.++++|++ ...
T Consensus 289 l~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~~---~~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~ 365 (412)
T 4ewg_A 289 LEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFG---ERMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTL 365 (412)
T ss_dssp HHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHHHHHC---TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCT
T ss_pred HHHcCCCHHHCCEEEccCCCCccccHHHHHHHHHHcC---CCCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCC
Confidence 9999999999999999999886 3333333 333 235566666668999999999999999999997 222
Q ss_pred CCccc------cccCc----cccccccceeEEecCCcceeEEEecC
Q psy12877 319 GQLSQ------FWYDE----NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 319 gl~~~------~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
.+... +.+.+ ....+++..+.++.||.+.+++|++.
T Consensus 366 ~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 366 NLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp TCCSBCTTSCCCEECCSSCEECCCSEEEEEEEEGGGEEEEEEEECC
T ss_pred CCCCCCCcccccccccCcccCCCCCEEEEeeecCCcceEEEEEeeC
Confidence 22111 01111 12356788888899999999999864
No 39
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.91 E-value=1.6e-23 Score=237.13 Aligned_cols=248 Identities=16% Similarity=0.192 Sum_probs=180.0
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++.+++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.++..+..
T Consensus 157 ~~a~~ia~~lgl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~------------------- 215 (431)
T 2ix4_A 157 MASGHVSMKYGFQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSV------------------- 215 (431)
T ss_dssp HHHHHHHHHHTCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHH-------------------
T ss_pred HHHHHHHHHHCCC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHH-------------------
Confidence 5889999999995 6999999999999999999999999999999999999997652110
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
..+. ..+.+... ...+
T Consensus 216 ------------------------------~~~~-----------~~~~ls~~-----------------------~~~~ 231 (431)
T 2ix4_A 216 ------------------------------AGFS-----------RSRALSTK-----------------------FNSS 231 (431)
T ss_dssp ------------------------------HHHH-----------HTTCBCCT-----------------------TTTC
T ss_pred ------------------------------HHHH-----------hccccCcc-----------------------ccCC
Confidence 0000 01111100 0001
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----CCCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~~~~~a~~~ 246 (814)
.+. ..+|+.. ..+++.++|||+|+||++++.|++++.+++++|.|++...+ .|...+.+...++++
T Consensus 232 ~~~--~~~pfd~-------~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~ 302 (431)
T 2ix4_A 232 PQE--ASRPFDC-------DRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTR 302 (431)
T ss_dssp GGG--SCCTTBT-------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHH
T ss_pred ccc--ccccCCC-------CCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHH
Confidence 111 1223321 24667799999999999999999999999999999998764 344345567889999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCC--CCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDID--PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS---- 315 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~--~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~---- 315 (814)
+|+++|++++|||++|+|++++.. +...+ +.++.. ..++++++++.++|||.|++|+..++++++||++
T Consensus 303 al~~agl~~~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ip 382 (431)
T 2ix4_A 303 ALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAP 382 (431)
T ss_dssp HHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEEC
T ss_pred HHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcC
Confidence 999999999999999999988752 22222 223321 2468888888899999999999999999999997
Q ss_pred CCCCCccc-----cccCc----cc-cccccceeEEecCCcceeEEEec
Q psy12877 316 GQKGQLSQ-----FWYDE----NT-TQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 316 g~~gl~~~-----~~~~~----~~-~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
....+... +.+.+ .. ..+++..+.++.||.+.+++|++
T Consensus 383 p~~~~~~~~p~~~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 383 MTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp CCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCCCcccCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence 12221111 01111 11 34677788888899999999975
No 40
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.91 E-value=1.5e-23 Score=237.57 Aligned_cols=248 Identities=15% Similarity=0.169 Sum_probs=181.4
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
.+++.+++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.+.. |..
T Consensus 165 ~~~a~~ia~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~------------------ 223 (437)
T 2gqd_A 165 DMATGQVSIDLGAK--GPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HMA------------------ 223 (437)
T ss_dssp THHHHHHHHHHTCC--SSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHH------------------
T ss_pred hHHHHHHHHHhCCC--CceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHH------------------
Confidence 35899999999995 599999999999999999999999999999999999998643 110
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+ ..|. ..+.+. +++.+.
T Consensus 224 ------------~------------------~~~~-----------~~~~ls-------------------~~~~p~--- 240 (437)
T 2gqd_A 224 ------------I------------------AGFS-----------ASRALS-------------------TNDDIE--- 240 (437)
T ss_dssp ------------H------------------HHHH-----------HTTCBC-------------------CCCCTT---
T ss_pred ------------H------------------HHHH-----------hccCcc-------------------CCCCCc---
Confidence 0 0000 011111 000000
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCC-----CCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI-----DFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~-----~~~~~~~~a~~ 245 (814)
...+|+.. ..+++.++|||+|+||++.+.|++.+.+++++|.|++...+... ..+.+...+++
T Consensus 241 -----~~~~pfd~-------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~ 308 (437)
T 2gqd_A 241 -----TACRPFQE-------GRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQ 308 (437)
T ss_dssp -----TSSCTTCT-------TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHH
T ss_pred -----cccCCCCC-------CCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHH
Confidence 12334321 24677799999999999999999999999999999999876432 22345578999
Q ss_pred HHHHHcCCCCCCccEEecCCCchHH----HHH-HhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcC----
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSVV----VLA-NIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG---- 316 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~~----~l~-~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g---- 316 (814)
++|+++||+++|||+||+|++++.. ++. ..+.||...+++++++.+..+||+.|++|+..++++++||+++
T Consensus 309 ~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp 388 (437)
T 2gqd_A 309 AAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAP 388 (437)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999974 222 2344565556788888888899999999999999999999971
Q ss_pred CCCCccc-----cccCc----cccccccceeEEecCCcceeEEEecC
Q psy12877 317 QKGQLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 317 ~~gl~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
...+... +.+.+ ....+++..+.++.||.+.+++|+..
T Consensus 389 ~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 435 (437)
T 2gqd_A 389 TIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 435 (437)
T ss_dssp BTTCCSCCSSCCSBCCBSSCEECCCSEEEEEEECGGGEEEEEEEECC
T ss_pred CCCCCCCCCCCCcccCCCccccCCCCEEEEccCcCCCeeEEEEEEec
Confidence 1111110 01111 11346777888888999999999864
No 41
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.90 E-value=2.4e-23 Score=235.90 Aligned_cols=247 Identities=18% Similarity=0.184 Sum_probs=180.6
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++.+++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||+|+|.+.. |..
T Consensus 165 ~~~a~~ia~~lgl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~------------------ 223 (438)
T 2iwz_A 165 NMAAGQVSIRYKLK--GPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PLS------------------ 223 (438)
T ss_dssp THHHHHHHHHHTCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHH------------------
T ss_pred hHHHHHHHHHhCCC--CceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HHH------------------
Confidence 35899999999994 599999999999999999999999999999999999998543 110
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+ ..|. ..+.+... .+++
T Consensus 224 ------------~------------------~~~~-----------~~~~ls~~---------------~~p~------- 240 (438)
T 2iwz_A 224 ------------L------------------AGFS-----------RARALSTN---------------SDPK------- 240 (438)
T ss_dssp ------------H------------------HHHH-----------HTTCBCCC---------------SCTT-------
T ss_pred ------------H------------------HHHH-----------hcCCcCCC---------------CCCC-------
Confidence 0 0000 01111100 0001
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIP 245 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~ 245 (814)
...+|+..+ .+++.++|||+++||++++.|++.+.+++++|.|++...+. |...+.+...+++
T Consensus 241 -----~~~~pfd~~-------~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~ 308 (438)
T 2iwz_A 241 -----LACRPFHPK-------RDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMA 308 (438)
T ss_dssp -----TSCCTTCTT-------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHH
T ss_pred -----cccccCCCC-------CCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHH
Confidence 123343322 35567999999999999999999999999999999997764 4334556688999
Q ss_pred HHHHHcCCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcC----
Q psy12877 246 TLLKNGGVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG---- 316 (814)
Q Consensus 246 ~al~~aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g---- 316 (814)
++|+++|++++|||++|+|++++.. ++..+ +.||....++++++.+..+||+.||+|+..+++++++|+++
T Consensus 309 ~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp 388 (438)
T 2iwz_A 309 AALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPP 388 (438)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHHcCCCHHHcCEEEecCCCCcccCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCC
Confidence 9999999999999999999999874 33333 34554445788877777789999999999999999999971
Q ss_pred CCCCccc-----cccCc-------cccccccceeEEecCCcceeEEEec
Q psy12877 317 QKGQLSQ-----FWYDE-------NTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 317 ~~gl~~~-----~~~~~-------~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
...+... +.+.+ ....+++..+.++.||.+.+++|++
T Consensus 389 ~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 437 (438)
T 2iwz_A 389 TLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG 437 (438)
T ss_dssp BTTCSCCCTTCCSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCCccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence 1111100 00111 1125677788888899999999975
No 42
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.90 E-value=1.3e-22 Score=228.77 Aligned_cols=245 Identities=16% Similarity=0.096 Sum_probs=175.8
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccC-CCCCCccccCcccCCCCcccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM-SNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~-s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.+++.+++..+|+. .|+++|+++|+|++.||.+|+++|++| +|+|||+|+|.+ +...+
T Consensus 146 ~~~a~~ia~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~------------------ 204 (415)
T 1tqy_B 146 AVNTGQISIRHGMR--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGW------------------ 204 (415)
T ss_dssp THHHHHHHHHHTCC--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHH------------------
T ss_pred hHHHHHHHHHhCCC--CceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHH------------------
Confidence 56899999999995 699999999999999999999999999 999999999984 32110
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
. .+ . ..+.+.. + -+++.
T Consensus 205 --------------~------------------~~-----~------~~~~ls~----------~-----~~~~~----- 221 (415)
T 1tqy_B 205 --------------V------------------SQ-----I------ASGRIST----------A-----TDPDR----- 221 (415)
T ss_dssp --------------H------------------HH-----H------TTSCBCC----------C-----SCGGG-----
T ss_pred --------------H------------------HH-----H------hccCccC----------C-----CCCCC-----
Confidence 0 00 0 0011100 0 00111
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCC-CccEEEEEEEEecCCCCCCCC--cHHHHHHH
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA-KPLARIIAYFDAATEPIDFPI--APAFAIPT 246 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~-~p~a~I~g~~~~~~~p~~~~~--~~~~a~~~ 246 (814)
..+|+.. ..+++.++|||+++||++++.|+++|. +++++|.|++...+....... +...++++
T Consensus 222 -------~~~pfd~-------~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~ 287 (415)
T 1tqy_B 222 -------AYLPFDE-------RAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRL 287 (415)
T ss_dssp -------SCCTTST-------TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHH
T ss_pred -------CcCCCCC-------CCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHH
Confidence 2233321 246778999999999999999999999 999999999998764322111 67889999
Q ss_pred HHHHcCCCCCCccEEecCCCchH----HHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcC----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSV----VVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG----QK 318 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~----~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g----~~ 318 (814)
+|+++|++++|||++|+|++++. .+...++.+ |...++.++.-+..+|||.||+|+.+++.++++|+++ ..
T Consensus 288 al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~-~g~~~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~ 366 (415)
T 1tqy_B 288 ALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRV-FGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTA 366 (415)
T ss_dssp HHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHH-HCTTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBC
T ss_pred HHHHcCCCHhHCCEEEEeCCCCcCcCHHHHHHHHHH-hCCCCceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCC
Confidence 99999999999999999999984 444444444 2233344445555579999999999999999999971 11
Q ss_pred CCccc-----cccCc----cccccccceeEEecCCcceeEEEecC
Q psy12877 319 GQLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 319 gl~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
.+... +.+.+ ....+++..+.++.||.+.+++|+.+
T Consensus 367 ~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~ 411 (415)
T 1tqy_B 367 GVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRF 411 (415)
T ss_dssp SCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCCCCCCCCCccccCCCCccCCCCEEEEecCcCCCeEEEEEEecC
Confidence 11110 00111 11356788888888999999999864
No 43
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.89 E-value=9.8e-23 Score=230.32 Aligned_cols=243 Identities=18% Similarity=0.152 Sum_probs=176.0
Q ss_pred HHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccccCcc
Q psy12877 16 QAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLS 95 (814)
Q Consensus 16 ~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (814)
+++..+|+. .|+++|+++|+|++.||++|+++|++|++|++||||+|.+.. |..
T Consensus 151 ~ia~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~----------------------- 204 (424)
T 1tqy_A 151 EVAWAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PIV----------------------- 204 (424)
T ss_dssp HHHHHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHH-----------------------
T ss_pred HHHHhcCCC--CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HHH-----------------------
Confidence 899999995 699999999999999999999999999999999999998643 110
Q ss_pred cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCHHhh
Q psy12877 96 DVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKF 175 (814)
Q Consensus 96 ~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~~ 175 (814)
+ ..+ + ..+.+... . .++|.
T Consensus 205 -------~------------------~~~---~--------~~~~ls~~---------~-----~~p~~----------- 223 (424)
T 1tqy_A 205 -------V------------------ACF---D--------AIRATTAR---------N-----DDPEH----------- 223 (424)
T ss_dssp -------H------------------HHH---H--------HTTCBCCC---------C-----SCGGG-----------
T ss_pred -------H------------------HHH---H--------hhccccCC---------C-----CCCCC-----------
Confidence 0 000 0 01111100 0 01111
Q ss_pred hcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHHHHHHH
Q psy12877 176 KSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKN 250 (814)
Q Consensus 176 ~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~ 250 (814)
..+|+.. ..+++.++|||+++||++.+.|++.|.+++++|.|++...+. |...+.+...+++++|++
T Consensus 224 -~~rpfd~-------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~ 295 (424)
T 1tqy_A 224 -ASRPFDG-------TRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDE 295 (424)
T ss_dssp -CCCTTBT-------TCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHH
T ss_pred -CccCCCC-------CCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 2233331 246677999999999999999999999999999999987763 333345567899999999
Q ss_pred cCCCCCCccEEecCCCchHH----HHHHh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHcC----CCCCc
Q psy12877 251 GGVAKQDVALWEINEAFSVV----VLANI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSG----QKGQL 321 (814)
Q Consensus 251 aGl~~~DID~~e~~d~fa~~----~l~~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~g----~~gl~ 321 (814)
+|++++|||++|.|++++.. ++..+ +.|+...+++++++.+..+||+.|++|+..+++++++|+++ ...+.
T Consensus 296 agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~ 375 (424)
T 1tqy_A 296 SRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLR 375 (424)
T ss_dssp HTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCC
T ss_pred cCCCHHHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCC
Confidence 99999999999999999863 33333 34444444677766677789999999999999999999972 11111
Q ss_pred cc-----cccCc----cccccccceeEEecCCcceeEEEec
Q psy12877 322 SQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISC 353 (814)
Q Consensus 322 ~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~ 353 (814)
.. +.+.+ +...+++..+.++.||.+.+++|+.
T Consensus 376 ~~~p~~~~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~ 416 (424)
T 1tqy_A 376 TSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRD 416 (424)
T ss_dssp SBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCcccCCCcccCCCCCEEEEccccCCceEEEEEEcc
Confidence 10 01111 1135677888888899999999986
No 44
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.89 E-value=1.7e-22 Score=228.58 Aligned_cols=244 Identities=19% Similarity=0.213 Sum_probs=178.0
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++..++..+|+. .|+++|+++|+|++.||.+|+++|++|++|+|||||+|.+.. |.
T Consensus 161 ~~a~~is~~lgl~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~-------------------- 217 (430)
T 1ox0_A 161 MASGNVAMRFGAN--GVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PF-------------------- 217 (430)
T ss_dssp HHHHHHHHHHTCC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HH--------------------
T ss_pred HHHHHHHHHhcCC--CceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH--------------------
Confidence 4788899999995 699999999999999999999999999999999999998543 10
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
. +..+ . ..+.+ ..++.++.
T Consensus 218 ----------~------------------~~~~-----~------~~~~l-------------------s~~~~p~~--- 236 (430)
T 1ox0_A 218 ----------A------------------IAGF-----Q------ALTAL-------------------STTEDPTR--- 236 (430)
T ss_dssp ----------H------------------HHHH-----H------HTTCB-------------------CCCSSTTS---
T ss_pred ----------H------------------HHHH-----H------hCCCc-------------------cCCCCCCC---
Confidence 0 0000 0 01111 11111111
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCC-----CCCCCCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~~~~~a~~~ 246 (814)
..+|+.+ ..|++.++|||+++||++++.|++.|.+++++|.|++...+. |...+.+...++++
T Consensus 237 -----~~~pFd~-------~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~ 304 (430)
T 1ox0_A 237 -----ASIPFDK-------DRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKL 304 (430)
T ss_dssp -----SSCTTBT-------TCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHH
T ss_pred -----CCCCCCC-------CCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHH
Confidence 2233331 257778999999999999999999999999999999987652 33345567889999
Q ss_pred HHHHcCCCCCCccEEecCCCchHHH----H-HHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CC
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVVV----L-ANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQ 317 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~~----l-~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~ 317 (814)
+|+++|++++|||+||+|++++... . ...+.+|- .-+||..+|. +|||.||+|+..+++++++|++ ..
T Consensus 305 al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~-~~~v~s~k~~--~GH~~gAaG~~~~i~~~~~l~~~~ipp~ 381 (430)
T 1ox0_A 305 ALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK-EVPVSSTKSF--TGHLLGAAGAVEAIVTIEAMRHNFVPMT 381 (430)
T ss_dssp HHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS-SSEEECTHHH--HCBCGGGHHHHHHHHHHHHHHHTEECCB
T ss_pred HHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHHhCC-Cceecccccc--cccchhhHHHHHHHHHHHHHhcCccCCC
Confidence 9999999999999999999999753 1 22234443 2367777776 5999999999999999999997 11
Q ss_pred CCCccc-----cccCc----cccccccceeEEecCCcceeEEEecC
Q psy12877 318 KGQLSQ-----FWYDE----NTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 318 ~gl~~~-----~~~~~----~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
..+... +.+.+ +...+++..+.++.||.+.+++|+..
T Consensus 382 ~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 427 (430)
T 1ox0_A 382 AGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRW 427 (430)
T ss_dssp SSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCCCCcccCCCCCcCCCCCEEEEeCccCCCceEEEEEeec
Confidence 222111 01111 12356778888888999999999864
No 45
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.87 E-value=1.7e-21 Score=218.85 Aligned_cols=244 Identities=14% Similarity=0.086 Sum_probs=172.8
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
..++.+++..+|+. .|+++|+++|+|++.||++|+++|++|++|++||||+|.++....
T Consensus 140 ~~~a~~is~~lgl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~------------------- 198 (406)
T 2vba_A 140 SGVSACLATPFKIH--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMA------------------- 198 (406)
T ss_dssp THHHHHHHTTTTCC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH-------------------
T ss_pred HHHHHHHHHhccCC--CceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHH-------------------
Confidence 36889999999994 799999999999999999999999999999999999999764100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+ . ..+ .+.+... ++ .+++
T Consensus 199 ------------~----~--~~~------------------------~~~ls~~--------~~-----~~p~------- 216 (406)
T 2vba_A 199 ------------C----E--FDA------------------------MGALSTK--------YN-----DTPE------- 216 (406)
T ss_dssp ------------H----H--HHH------------------------TTCBCCS--------CT-----TSGG-------
T ss_pred ------------H----H--Hhh------------------------ccccccc--------cC-----CCCc-------
Confidence 0 0 000 1111100 00 0011
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC---CCCcHHHHHHHH
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID---FPIAPAFAIPTL 247 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~---~~~~~~~a~~~a 247 (814)
...+|+... .++..++|||+++||++++.|+++|.+++++|.|++...+.... .+.+...+++++
T Consensus 217 -----~~~~pfd~~-------~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~a 284 (406)
T 2vba_A 217 -----KASRTYDAH-------RDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMA 284 (406)
T ss_dssp -----GSCCTTBTT-------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHH
T ss_pred -----cccCcCcCC-------CCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHH
Confidence 123344322 35566899999999999999999999999999999997763211 145667899999
Q ss_pred HHHcCCCCCCccEEecCCCchHH-HHH---Hh-hhcCCCCCCcccCCCCccccCCCCChHHHHHHHHHHHHHc----CCC
Q psy12877 248 LKNGGVAKQDVALWEINEAFSVV-VLA---NI-KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS----GQK 318 (814)
Q Consensus 248 l~~aGl~~~DID~~e~~d~fa~~-~l~---~~-e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~----g~~ 318 (814)
|+++| +|||++|.|++++.. ... .+ +.||.. ++++++-+-.+||+.||+|+..+++++++|++ ...
T Consensus 285 l~~ag---~dId~ve~HgtgT~~gD~~E~~al~~~fg~~--~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~ 359 (406)
T 2vba_A 285 MHGVD---TPIDYLNSHGTSTPVGDVKELAAIREVFGDK--SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSI 359 (406)
T ss_dssp HTTCC---SCCCEEECCCCSCHHHHHHHHHHHHHHHTTC--CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCC
T ss_pred HhhCC---CCccEEEeeCccCcccCHHHHHHHHHHhCcC--CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 99999 999999999999863 222 22 334433 34454444458999999999999999999997 111
Q ss_pred CCccc------cccCccc---cccccceeEEecCCcceeEEEecC
Q psy12877 319 GQLSQ------FWYDENT---TQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 319 gl~~~------~~~~~~~---~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
.+... +.+.+.. ..+++..+.++.||.+.+++|+..
T Consensus 360 ~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 404 (406)
T 2vba_A 360 NIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKL 404 (406)
T ss_dssp CCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCccccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEeC
Confidence 21111 0111111 346777888888999999999864
No 46
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.87 E-value=2.7e-21 Score=236.48 Aligned_cols=242 Identities=19% Similarity=0.191 Sum_probs=184.5
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++..++..+|+. .|+++|+++|+|++.||++|+++|++|++|++||||+|.++......
T Consensus 177 ~~a~ris~~lgl~--Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~------------------ 236 (917)
T 2hg4_A 177 VASGRVAYCLGLE--GPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFT------------------ 236 (917)
T ss_dssp HHHHHHHHHHTCC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHH------------------
T ss_pred hHHHHHHHhcCCC--CCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhH------------------
Confidence 5788999999994 69999999999999999999999999999999999999987521100
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
.+ ...+. +.+|.
T Consensus 237 -------------------------------~~-----------~~~~~-------------------ls~~g------- 248 (917)
T 2hg4_A 237 -------------------------------EF-----------RSQGG-------------------LAADG------- 248 (917)
T ss_dssp -------------------------------HH-----------TTSSC-------------------BCTTS-------
T ss_pred -------------------------------hh-----------hhccC-------------------cCCcc-------
Confidence 00 00011 11221
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCC-----cHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI-----APAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~-----~~~~a~~~ 246 (814)
.++|+. +..|++.++||+++|||.+.+.|++.|.+++++|.|++.+.+......+ +...++++
T Consensus 249 -----~~~pFd-------~~adG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~ 316 (917)
T 2hg4_A 249 -----RCKPFS-------KAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRR 316 (917)
T ss_dssp -----CCCTTB-------TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHH
T ss_pred -----ccCccc-------ccccCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHH
Confidence 122322 3567888999999999999999999999999999999998775543322 33579999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH----H-HHHhhhcCCC---CCCcccCCCCccccCCCCChHHHHHHHHHHHHHc---
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV----V-LANIKKLDID---PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--- 315 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~----~-l~~~e~lg~~---~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--- 315 (814)
+|+++|++++|||++|+|++++.. + ....+.+|.. ..++|+++++..+||+.+++|+..+++++++|++
T Consensus 317 Al~~Agl~p~dId~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~i 396 (917)
T 2hg4_A 317 ALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEM 396 (917)
T ss_dssp HHHHHTCCGGGCCEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEE
T ss_pred HHHHcCCCHHHCCEEeeccCCCccCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999953 2 2334455653 2479999999999999999999999999999997
Q ss_pred -CCCCCcc------------------ccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 316 -GQKGQLS------------------QFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 -g~~gl~~------------------~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
....+.. ..|.. ....+++.++.++.||.+.+++||.+
T Consensus 397 pp~~~~~~~~p~i~~~~~~~~v~~~~~~w~~-~~~~r~a~v~sfG~gG~Nah~vl~~~ 453 (917)
T 2hg4_A 397 PRTLHFDEPSPQIEWDLGAVSVVSQARSWPA-GERPRRAGVSSFGISGTNAHVIVEEA 453 (917)
T ss_dssp CCCTTCCSBCTTSCC---CCEECCSCEECCC-CSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred CCCCCCCCCCccCCccccceeecCCcccCCC-CCCCCEEEEeeecCCCceEEEEeccC
Confidence 1111110 12321 12357888888888999999999864
No 47
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.85 E-value=9.4e-21 Score=231.58 Aligned_cols=242 Identities=15% Similarity=0.180 Sum_probs=182.9
Q ss_pred hHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 12 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 12 ~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.++..++..+|+. .|+++|+++|+|++.||++|+++|++|++|++||||+|.++....
T Consensus 155 ~~a~ris~~lgl~--Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~-------------------- 212 (915)
T 2qo3_A 155 VASGRISYTMGLE--GPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGV-------------------- 212 (915)
T ss_dssp HHHHHHHHHHTBC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHH--------------------
T ss_pred HHHHHHHHHhCCC--CCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHH--------------------
Confidence 5788999999994 699999999999999999999999999999999999999765110
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
+. .+ + ..+. +.+|..
T Consensus 213 -----------~~------------------~~---~--------~~~~-------------------ls~~g~------ 227 (915)
T 2qo3_A 213 -----------FV------------------DF---S--------RQRA-------------------LAADGR------ 227 (915)
T ss_dssp -----------HH------------------HH---H--------TTTC-------------------BCSSCC------
T ss_pred -----------HH------------------HH---h--------hhcc-------------------cCCCCC------
Confidence 00 00 0 0111 111111
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC-----CCcHHHHHHH
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF-----PIAPAFAIPT 246 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~-----~~~~~~a~~~ 246 (814)
++|+.. ..|++.++||+++|||.+.+.|++.|.+++++|.|++...+..... +.+...++++
T Consensus 228 ------~~~Fd~-------~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~ 294 (915)
T 2qo3_A 228 ------SKAFGA-------GADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQ 294 (915)
T ss_dssp ------CCTTBT-------TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHH
T ss_pred ------cccccC-------CCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHH
Confidence 223321 2366678999999999999999999999999999999977543221 2345779999
Q ss_pred HHHHcCCCCCCccEEecCCCchHH-----HHHHhhhcCCCC---CCcccCCCCccccCCCCChHHHHHHHHHHHHHc---
Q psy12877 247 LLKNGGVAKQDVALWEINEAFSVV-----VLANIKKLDIDP---SKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS--- 315 (814)
Q Consensus 247 al~~aGl~~~DID~~e~~d~fa~~-----~l~~~e~lg~~~---~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~--- 315 (814)
+|+++|++++|||++|.|++++.. .....+.++... .|+|+++++..+||+.|++|+..+++++++|++
T Consensus 295 Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~i 374 (915)
T 2qo3_A 295 ALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGEL 374 (915)
T ss_dssp HHHHTTCCGGGCCEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEE
T ss_pred HHHHcCCCHHHCcEEEecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCC
Confidence 999999999999999999998743 233445666543 489999999999999999999999999999997
Q ss_pred -CCCCCcc------------------ccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 316 -GQKGQLS------------------QFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 -g~~gl~~------------------~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
....+.. ..|.. ....+++.++.++.||.+.+++||.+
T Consensus 375 pp~~~~~~~~p~~~~~~~~~~~~~~~~~w~~-~~~~r~a~v~sfG~gG~Nah~vl~~~ 431 (915)
T 2qo3_A 375 PATLHVEEPTPHVDWSSGGVALLAGNQPWRR-GERTRRAAVSAFGISGTNAHVIVEEA 431 (915)
T ss_dssp CCCSSCSSBCTTSCCSSSSEEECSSCEECCS-SSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred CCCCCCCCCCcccccccCceeeecCCccccc-CCCCcEEEEeeecCCCceEEEEEeec
Confidence 1111110 12321 23357888888888999999999864
No 48
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.83 E-value=6.6e-20 Score=242.58 Aligned_cols=253 Identities=13% Similarity=0.126 Sum_probs=177.9
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccccc
Q psy12877 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYD 92 (814)
Q Consensus 13 ~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (814)
.+|.+...+|+ .+|+++|+++|+||+.||++|+++|++|+||++||||+|.++..++..
T Consensus 2719 aa~is~~~lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~------------------- 2777 (3089)
T 3zen_D 2719 AAHVMQSYVGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIG------------------- 2777 (3089)
T ss_dssp HHHHHHHTTCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-------------------
T ss_pred HHHHHHHHcCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHH-------------------
Confidence 34444456699 579999999999999999999999999999999999999976422100
Q ss_pred CcccccccccHHHH-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 93 GLSDVYNKIHMGNC-AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 93 ~~~~~~~~~~~~~~-a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
+ ..|+.. ...++..++. +++.
T Consensus 2778 -f------~~~~als~~~~~~~~~~--------------------------------------------sp~~------- 2799 (3089)
T 3zen_D 2778 -F------GDMAATADTEMMRAKGI--------------------------------------------SDSK------- 2799 (3089)
T ss_dssp -H------HHHTCBCCHHHHHHTTC--------------------------------------------CTTT-------
T ss_pred -H------HHhhhhhcchhhhhccC--------------------------------------------Cccc-------
Confidence 0 000000 0001111110 1111
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCC------------c
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI------------A 239 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~------------~ 239 (814)
.++|+....+|.+ ++|||+++||++.+.|++.|.++++.|.+.+...+....... +
T Consensus 2800 -----~crpFd~~~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~ 2867 (3089)
T 3zen_D 2800 -----FSRANDRRRLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGG 2867 (3089)
T ss_dssp -----SCCSSBTTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTG
T ss_pred -----ccCccccCCCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhh
Confidence 2334432333444 789999999999999999999999988888775542211111 2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEecCCCchH----HHH----HHhhhcCCCC-CCcccCCCCccccCCCCChHHHHHHHHH
Q psy12877 240 PAFAIPTLLKNGGVAKQDVALWEINEAFSV----VVL----ANIKKLDIDP-SKVNVHGGAVSLGHPIGMSGARIVIHLC 310 (814)
Q Consensus 240 ~~~a~~~al~~aGl~~~DID~~e~~d~fa~----~~l----~~~e~lg~~~-~~vN~~GG~la~Ghp~gasG~~~l~e~v 310 (814)
...+++++|+++|++++|||+||.|++++. .+. ...+.||... .++|+++++..+|||.||+|+.+++.++
T Consensus 2868 q~~ai~~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~l 2947 (3089)
T 3zen_D 2868 RESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLC 2947 (3089)
T ss_dssp GGSHHHHHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHH
Confidence 234799999999999999999999998885 222 3456788765 5899999999999999999999999999
Q ss_pred HHHHc----CCCCCccc-----------------cccCccccccccceeEEecCCcceeEEEecCcch
Q psy12877 311 HALKS----GQKGQLSQ-----------------FWYDENTTQRLSEEVVCRAGKEGSIALISCPTLY 357 (814)
Q Consensus 311 ~qLr~----g~~gl~~~-----------------~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~~~~ 357 (814)
++|++ +...+... .|. .....+++.+++++.||.+.+++|+.+...
T Consensus 2948 l~L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~-~~~~~r~a~vnSfGfGG~NahvVle~~~~~ 3014 (3089)
T 3zen_D 2948 QILRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLR-GKFPLKAGLVTSLGFGHVSGLVALVHPEAF 3014 (3089)
T ss_dssp HHHHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCC-TTSCCCEEEEEEEETTTEEEEEEEECGGGT
T ss_pred HHHhcCccCCCCCCCCCCCCccccCCeeecCCCccCC-CCCCCCEEEEccccCCCCeEEEEEecCchh
Confidence 99997 22222111 121 122256888888999999999999976543
No 49
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.79 E-value=1.9e-18 Score=212.04 Aligned_cols=241 Identities=15% Similarity=0.124 Sum_probs=171.4
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
...++..++..+|+ ..|+++|+++|+|++.||++|+++|++|+||++||||+|.++....
T Consensus 139 ~~~~a~ris~~lgl--~GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~------------------ 198 (965)
T 3hhd_A 139 RAMMANRLSFFFDF--RGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNT------------------ 198 (965)
T ss_dssp TTHHHHHHHHHHTC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHH------------------
T ss_pred cchHHHHHHHHhCC--CCCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH------------------
Confidence 35688999999999 4799999999999999999999999999999999999999875211
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+...++ .+.+ .+|.
T Consensus 199 ----------------------------------~~~~~~--------~~~l-------------------s~~g----- 212 (965)
T 3hhd_A 199 ----------------------------------SVQFLR--------LGML-------------------SPEG----- 212 (965)
T ss_dssp ----------------------------------HHHHHH--------HTCB-------------------CTTC-----
T ss_pred ----------------------------------HHHHHh--------ccCc-------------------CCCC-----
Confidence 000000 0111 1111
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCC------CcHHHH
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP------IAPAFA 243 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~------~~~~~a 243 (814)
.++++..+.+|++ .+||+++|||++.+.|+ +++++|+|++.+.+.....+ .+...+
T Consensus 213 -------~~~~Fd~~adG~~-------~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~ 274 (965)
T 3hhd_A 213 -------TCKAFDTAGNGYC-------RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQL 274 (965)
T ss_dssp -------CCCTTBTTCCSBC-------BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHH
T ss_pred -------ccccchhccCCcc-------ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHH
Confidence 1223332333444 58999999999999885 47899999999887654222 234679
Q ss_pred HHHHHHHcCCCCCCccEEecCCCchH----HHHHHh-hhcCCC-CCCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 244 IPTLLKNGGVAKQDVALWEINEAFSV----VVLANI-KKLDID-PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 244 ~~~al~~aGl~~~DID~~e~~d~fa~----~~l~~~-e~lg~~-~~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
++++|++||++++|||++|.|.+++. .+...+ +.++-. ..|+.+.+-+..+||+.||+|+..++.++++|++
T Consensus 275 i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ 354 (965)
T 3hhd_A 275 IRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGL 354 (965)
T ss_dssp HHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHhCCCHHHhccccccCCCCCCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCC
Confidence 99999999999999999999999983 344443 444432 2356666666668999999999999999999997
Q ss_pred --CCCCCccc-----cccC-------ccc--cccccceeEEecCCcceeEEEecC
Q psy12877 316 --GQKGQLSQ-----FWYD-------ENT--TQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 --g~~gl~~~-----~~~~-------~~~--~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
....+... +|.. ... ..+.+.++.++.||.+.+++||.+
T Consensus 355 ipp~~~~~~~np~i~~~~~~~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~ 409 (965)
T 3hhd_A 355 WAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPN 409 (965)
T ss_dssp ECCCSSCCSBCTTCHHHHHTSEEECCSCEECCSCEEEEEEECTTSEEEEEEEEEC
T ss_pred cCCccCCCCCCccCcccccCceeecCCCccCCCCeEEEecccCCCceEEEEeccC
Confidence 22222111 0110 000 122566777888999999999854
No 50
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=99.77 E-value=1.8e-18 Score=194.79 Aligned_cols=191 Identities=19% Similarity=0.226 Sum_probs=143.7
Q ss_pred HHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcCCC
Q psy12877 403 TKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAGLP 452 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~Gl~ 452 (814)
.+|+.+++++||+|||+++++|| +|++|+..+.. .....+..++..+|+.
T Consensus 78 ~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 157 (416)
T 1e5m_A 78 CHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAK 157 (416)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCC
Confidence 37999999999999999999999 79999765421 0124688899999995
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeecc-ccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM-SNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~-s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
.|.++++++|+||+.||+.|+++|++|++|++|++|+|.+ +...+ .. +
T Consensus 158 --gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~--------------------~~---------~ 206 (416)
T 1e5m_A 158 --GPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSY--------------------AG---------F 206 (416)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHH--------------------HH---------H
T ss_pred --CceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHH--------------------HH---------H
Confidence 5999999999999999999999999999999999999985 31100 00 0
Q ss_pred HHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 532 GNCAENTAKKFNI-SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 532 g~~Ae~~~~~~Gi-tre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
...+. +++ ..+|.+ ..|| |
T Consensus 207 --------~~~~~ls~~--------------~~~p~~-------------------------------------~~rp-f 226 (416)
T 1e5m_A 207 --------ASARALSFR--------------NDDPLH-------------------------------------ASRP-F 226 (416)
T ss_dssp --------HHTTCBCCC--------------TTCGGG-------------------------------------TCCT-T
T ss_pred --------HHcCCccCC--------------CCCCcc-------------------------------------cccc-C
Confidence 00000 000 001111 0112 2
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCC-Ccc
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQ-LSQ 684 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~-~sq 684 (814)
++ ..|++.++|||+++||++++.|+++|.+++++|+|++...+. |...+.+...+++++|+++++ .+|
T Consensus 227 d~------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~d 300 (416)
T 1e5m_A 227 DK------DRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEM 300 (416)
T ss_dssp BT------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred cc------CCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhH
Confidence 21 135677999999999999999999999999999999987664 544566778899999999999 589
Q ss_pred eeEehh
Q psy12877 685 FWYDEN 690 (814)
Q Consensus 685 ~~y~e~ 690 (814)
|+|.+-
T Consensus 301 Id~ve~ 306 (416)
T 1e5m_A 301 VSYINA 306 (416)
T ss_dssp CCEEEC
T ss_pred CCEEEE
Confidence 999983
No 51
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.77 E-value=4.3e-19 Score=216.65 Aligned_cols=251 Identities=15% Similarity=0.158 Sum_probs=165.9
Q ss_pred HHHHHHH-HcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 13 PCRQAVI-FAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 13 ~ar~~a~-~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.+.+++. .+|+ .+|+++++++|+|++.||..|++.|++|++|++||||+|.++..+..... .++....
T Consensus 1084 ~Aa~Vs~~~LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa---~mgaLS~------ 1152 (1688)
T 2pff_A 1084 MSAWVNMLLISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFG---NMKATSN------ 1152 (1688)
T ss_dssp HHHHHHHSSCCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTT---TTSCSCC------
T ss_pred HHHHHHHHHcCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHH---hcccccc------
Confidence 3445666 6888 57999999999999999999999999999999999999998654321100 0000000
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
+.+ .+.. | .++++
T Consensus 1153 -------------------------~~~--------------------e~a~-----------G----~~Pd~------- 1165 (1688)
T 2pff_A 1153 -------------------------TLE--------------------EFEH-----------G----RTPAE------- 1165 (1688)
T ss_dssp -------------------------TTT--------------------TTTS-----------S----CCSSS-------
T ss_pred -------------------------Chh--------------------hhhc-----------C----CChhh-------
Confidence 000 0000 0 11222
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC------CC-------
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF------PI------- 238 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~------~~------- 238 (814)
.++|+...++| ..++|||+++||++.+.|+++|.+++++|.|++.+++..... +.
T Consensus 1166 -----~cRPFd~~rdG-------fv~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~ 1233 (1688)
T 2pff_A 1166 -----MSRPATTTRNG-------FMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREH 1233 (1688)
T ss_dssp -----SCCSSSSSCCC-------CCCCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSC
T ss_pred -----ccCcCccCCCC-------CccccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhc
Confidence 23344423234 347899999999999999999999999999999877632110 10
Q ss_pred --------------------------------------------------------------------------------
Q psy12877 239 -------------------------------------------------------------------------------- 238 (814)
Q Consensus 239 -------------------------------------------------------------------------------- 238 (814)
T Consensus 1234 ~G~~taPSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f 1313 (1688)
T 2pff_A 1234 HSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDF 1313 (1688)
T ss_dssp CCCSSCSSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSS
T ss_pred ccccCCCCcccChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCce
Confidence
Q ss_pred ----cHHHHHHHHHHHcCCCCCCccEEecCCCchHH----HHH-Hhhhc---CCCC---CCcccCCCCccccCCCCChHH
Q psy12877 239 ----APAFAIPTLLKNGGVAKQDVALWEINEAFSVV----VLA-NIKKL---DIDP---SKVNVHGGAVSLGHPIGMSGA 303 (814)
Q Consensus 239 ----~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~----~l~-~~e~l---g~~~---~~vN~~GG~la~Ghp~gasG~ 303 (814)
+...++++||+++||+++|||++|.|++++.. +.. ..+.+ +-.. -+++...+. +|||.||+|+
T Consensus 1314 ~~~d~~~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~Ksl--iGHp~GAAGa 1391 (1688)
T 2pff_A 1314 YKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFL--TGHPKGAAGA 1391 (1688)
T ss_dssp SSSCTTCCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTT--TCCCSSTHHH
T ss_pred ecchHHHHHHHHHHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhh--hcchHHHhhH
Confidence 00357899999999999999999999998821 111 12233 2221 134444444 5999999999
Q ss_pred HHHHHHHHHHHc----CCCCCccc------ccc----Cccc---cccccceeEEecCCcceeEEEecCc
Q psy12877 304 RIVIHLCHALKS----GQKGQLSQ------FWY----DENT---TQRLSEEVVCRAGKEGSIALISCPT 355 (814)
Q Consensus 304 ~~l~e~v~qLr~----g~~gl~~~------~~~----~~~~---~~~~~~~~~~~ggG~g~a~ll~~~~ 355 (814)
.+++.++++|++ +...+... +.+ .... ..+++..++++.||.++.++|+.+.
T Consensus 1392 ~~Lik~llaL~~G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p~ 1460 (1688)
T 2pff_A 1392 WMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1460 (1688)
T ss_dssp HHHHHHHHHSTTCCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECSS
T ss_pred HHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCCC
Confidence 999999999997 22222110 111 1111 2467778888889999888887554
No 52
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.76 E-value=5.7e-18 Score=190.49 Aligned_cols=193 Identities=20% Similarity=0.236 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHHHcCC-CCcCcc----eEEEEecccC--------------------------CCCChHHHHHHHHcC
Q psy12877 402 ATKLGAVAIESAIQKANM-DKSDVQ----EVYMGNVCQA--------------------------GLGQAPCRQAVIFAG 450 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl-~~~dID----~vivG~~~~~--------------------------~~~~~~a~~~a~~~G 450 (814)
..+|+.+|+++||+|||+ ++++|| ++++|+..+. ......+..++..+|
T Consensus 77 ~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (412)
T 4ewg_A 77 VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWD 156 (412)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhC
Confidence 467999999999999999 788899 8888875421 012346888999999
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .|.++++++|+||+.||+.|+++|++|++|++||+|+|.++..+..
T Consensus 157 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~------------------------------ 204 (412)
T 4ewg_A 157 LK--GRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVA------------------------------ 204 (412)
T ss_dssp CC--SCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH------------------------------
T ss_pred CC--CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHH------------------------------
Confidence 95 5999999999999999999999999999999999999997521100
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
.+ .....+.. ...+| |. ..|| |
T Consensus 205 -------------------------~~------~~~~~l~~---------~~~~p------~~-----------~~rp-f 226 (412)
T 4ewg_A 205 -------------------------VF------DTLYATST---------RNDEP------HL-----------TPRP-F 226 (412)
T ss_dssp -------------------------HH------HTTTCBCC---------CTTCG------GG-----------CCCT-T
T ss_pred -------------------------HH------HHhhcccc---------CCCCC------CC-----------CCCC-C
Confidence 00 00000000 00000 00 0112 2
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCC---CCCchHHhHHHHHHHhcCC-Cccee
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI---DFPIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~---~~~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
++ ..|++.++|||++|||++++.|+++|.+++++|+|++...+... ..+.+...+++++|+++++ .+||+
T Consensus 227 d~------~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId 300 (412)
T 4ewg_A 227 DA------KRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIA 300 (412)
T ss_dssp BT------TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CC------CCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCC
Confidence 11 23667799999999999999999999999999999998766221 1345777899999999999 68999
Q ss_pred Eehh
Q psy12877 687 YDEN 690 (814)
Q Consensus 687 y~e~ 690 (814)
|.+-
T Consensus 301 ~ve~ 304 (412)
T 4ewg_A 301 YVNA 304 (412)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9983
No 53
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.76 E-value=5.6e-18 Score=214.11 Aligned_cols=253 Identities=15% Similarity=0.176 Sum_probs=170.3
Q ss_pred HHHHHHH-HcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 13 PCRQAVI-FAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 13 ~ar~~a~-~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.+.+++. .+|+ .+|+++++++|+||+.||++|++.|++|+||++||||+|.++.....
T Consensus 1283 ~aa~is~~~lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~------------------- 1341 (1887)
T 2uv8_A 1283 MSAWVNMLLISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSF------------------- 1341 (1887)
T ss_dssp HHHHHHHHTTCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH-------------------
T ss_pred HHHHHHHHHcCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHH-------------------
Confidence 4556666 4888 57999999999999999999999999999999999999987532110
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
+ ....+.+-+..++++ .+ .++++
T Consensus 1342 ------------~------f~~m~als~~~~e~~------------~g--------------------~~p~~------- 1364 (1887)
T 2uv8_A 1342 ------------E------FGNMKATSNTLEEFE------------HG--------------------RTPAE------- 1364 (1887)
T ss_dssp ------------H------HHHTTCBCCHHHHHH------------TT--------------------CCGGG-------
T ss_pred ------------H------HHHhhhhccchhhhc------------cc--------------------CCCcc-------
Confidence 0 011111111111110 00 01222
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCCCC-------------
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI------------- 238 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~~~------------- 238 (814)
.++|+...++|++ ++||++++||++.+.|+++|.+++++|.|++.+++.......
T Consensus 1365 -----~~RPfd~~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~ 1432 (1887)
T 2uv8_A 1365 -----MSRPATTTRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREH 1432 (1887)
T ss_dssp -----SCCTTBTTCCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCC
T ss_pred -----CcCCCcccCCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCcccccccccc
Confidence 2344443333544 789999999999999999999999999999998764321100
Q ss_pred -------cH-----------------------------------------------------------------------
Q psy12877 239 -------AP----------------------------------------------------------------------- 240 (814)
Q Consensus 239 -------~~----------------------------------------------------------------------- 240 (814)
.+
T Consensus 1433 ~G~gt~ps~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~ 1512 (1887)
T 2uv8_A 1433 HSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDF 1512 (1887)
T ss_dssp CSCCSSCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred ccccCCCCcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 00
Q ss_pred ------HHHHHHHHHHcCCCCCCccEEecCCCchHH-H---HH-Hhhhc---CCCC-CCcccCCCCccccCCCCChHHHH
Q psy12877 241 ------AFAIPTLLKNGGVAKQDVALWEINEAFSVV-V---LA-NIKKL---DIDP-SKVNVHGGAVSLGHPIGMSGARI 305 (814)
Q Consensus 241 ------~~a~~~al~~aGl~~~DID~~e~~d~fa~~-~---l~-~~e~l---g~~~-~~vN~~GG~la~Ghp~gasG~~~ 305 (814)
..+++++|+++||+++|||++|.|++++.. . .. ..+.| |-.. .|+.+..-+-.+|||.||+|+.+
T Consensus 1513 ~~~d~~~~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~ 1592 (1887)
T 2uv8_A 1513 YKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWM 1592 (1887)
T ss_dssp TTTCSSSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHH
T ss_pred hhchHHHHHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHH
Confidence 358999999999999999999999999932 1 11 11222 3332 23443333334699999999999
Q ss_pred HHHHHHHHHc----CCCCCccc------ccc----Cccc---cccccceeEEecCCcceeEEEecCc
Q psy12877 306 VIHLCHALKS----GQKGQLSQ------FWY----DENT---TQRLSEEVVCRAGKEGSIALISCPT 355 (814)
Q Consensus 306 l~e~v~qLr~----g~~gl~~~------~~~----~~~~---~~~~~~~~~~~ggG~g~a~ll~~~~ 355 (814)
++.++++|++ +...+... +.+ .... ..+++..++++.||.+..++|+.+.
T Consensus 1593 li~~ll~L~~g~iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1659 (1887)
T 2uv8_A 1593 MNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1659 (1887)
T ss_dssp HHHHHHHHTTCEECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred HHHHHHHHHhCCcCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecCC
Confidence 9999999998 33332111 111 1111 2467778888889999999998764
No 54
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.75 E-value=7.4e-18 Score=212.52 Aligned_cols=251 Identities=14% Similarity=0.147 Sum_probs=169.2
Q ss_pred HHHHHHH-HcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccccc
Q psy12877 13 PCRQAVI-FAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVY 91 (814)
Q Consensus 13 ~ar~~a~-~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (814)
.+.+++. .+|+ .+|.++++++|+||+.||+.|++.|++|+||++||||+|.++....
T Consensus 1258 ~aa~vs~~~lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~-------------------- 1315 (1878)
T 2uv9_A 1258 MAAWVNMLLLSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGS-------------------- 1315 (1878)
T ss_dssp HHHHHHHHTCCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHH--------------------
T ss_pred HHHHHHHHhcCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHH--------------------
Confidence 4556666 4888 5799999999999999999999999999999999999998653211
Q ss_pred cCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCC
Q psy12877 92 DGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 171 (814)
Q Consensus 92 ~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t 171 (814)
++ ....+.+-...++++ .| .++++.
T Consensus 1316 -----------~~------f~~m~als~~~de~a------------~g--------------------~~p~~~------ 1340 (1878)
T 2uv9_A 1316 -----------YE------FANMGATSNAKEEFA------------RG--------------------REPGEM------ 1340 (1878)
T ss_dssp -----------HH------HHHHTCBCCHHHHHT------------TT--------------------CCTTSS------
T ss_pred -----------HH------HHHhhhhccchhhhh------------cC--------------------CCcccC------
Confidence 00 011111111112221 00 122333
Q ss_pred HHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC----CCcH-------
Q psy12877 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF----PIAP------- 240 (814)
Q Consensus 172 ~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~----~~~~------- 240 (814)
+||+....+|+ .++||++++||++.+.|+++|.+++++|.|++.+++..... +.+.
T Consensus 1341 ------~RPfd~~r~Gf-------v~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~ 1407 (1878)
T 2uv9_A 1341 ------SRPTSTTRNGF-------MESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREK 1407 (1878)
T ss_dssp ------CCSSBTTCCCB-------CBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCC
T ss_pred ------cCCCccCCCCC-------cccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhc
Confidence 33443233344 47899999999999999999999999999999987633211 1110
Q ss_pred --------------------------------------------------------------------------------
Q psy12877 241 -------------------------------------------------------------------------------- 240 (814)
Q Consensus 241 -------------------------------------------------------------------------------- 240 (814)
T Consensus 1408 ~~~~ps~~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~ 1487 (1878)
T 2uv9_A 1408 SGNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQT 1487 (1878)
T ss_dssp CCSSCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCcccchHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence
Q ss_pred ------------HHHHHHHHHHcCCCCCCccEEecCCCchHH-HHHH----hhhc---CCCC-CC--cccCCCCccccCC
Q psy12877 241 ------------AFAIPTLLKNGGVAKQDVALWEINEAFSVV-VLAN----IKKL---DIDP-SK--VNVHGGAVSLGHP 297 (814)
Q Consensus 241 ------------~~a~~~al~~aGl~~~DID~~e~~d~fa~~-~l~~----~e~l---g~~~-~~--vN~~GG~la~Ghp 297 (814)
+.+++++|+++||+++|||++|.|++++.. .... .+.+ +-.. .| ++...+. +|||
T Consensus 1488 ~~g~~~~~~~~~~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~Ksl--iGH~ 1565 (1878)
T 2uv9_A 1488 SFGNEFWRRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYL--TGHP 1565 (1878)
T ss_dssp HHHTSTTTTCTTSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHH--HCBC
T ss_pred hhcccccccChHHHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccc--cCCh
Confidence 168999999999999999999999999932 2111 1222 3222 12 3333333 5999
Q ss_pred CCChHHHHHHHHHHHHHc----CCCCCccc----------cccCccc---cccccceeEEecCCcceeEEEecCc
Q psy12877 298 IGMSGARIVIHLCHALKS----GQKGQLSQ----------FWYDENT---TQRLSEEVVCRAGKEGSIALISCPT 355 (814)
Q Consensus 298 ~gasG~~~l~e~v~qLr~----g~~gl~~~----------~~~~~~~---~~~~~~~~~~~ggG~g~a~ll~~~~ 355 (814)
.|++|+.+++.++.+|++ +.+.+... .+..... ..+.+...+++.||.+..++|+.+.
T Consensus 1566 ~gAAGa~~li~~l~~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1640 (1878)
T 2uv9_A 1566 KGAAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHPK 1640 (1878)
T ss_dssp TTCHHHHHHHHHHHHHTTCEECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred HhHhhHHHHHHHHHHHhcCCCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecCC
Confidence 999999999999999998 33332111 1111111 2467778888889999999998765
No 55
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=99.72 E-value=1.5e-17 Score=187.71 Aligned_cols=197 Identities=22% Similarity=0.236 Sum_probs=144.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcC-cc----eEEEEeccc--------------------------CCCCChHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANMDKSD-VQ----EVYMGNVCQ--------------------------AGLGQAPCRQAVIFA 449 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~d-ID----~vivG~~~~--------------------------~~~~~~~a~~~a~~~ 449 (814)
+..+|+.+|+++||+|||+++++ +| ++++|+..+ .......+..++..+
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 165 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHc
Confidence 35679999999999999999998 88 678886532 111234677889999
Q ss_pred CCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 450 Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
|+. .|.++++++|+||+.||..|+++|++|++|++||+|+|++... .
T Consensus 166 gl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~-~------------------------------ 212 (428)
T 3kzu_A 166 KLR--GPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSR-I------------------------------ 212 (428)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSH-H------------------------------
T ss_pred CCC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCH-H------------------------------
Confidence 995 5999999999999999999999999999999999999985311 0
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATV 609 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~ 609 (814)
.+..+. ....+... ....+ -...+|+
T Consensus 213 ------------------~~~~~~-----------~~~~ls~~--------~~~~~-----------------~~~~~pf 238 (428)
T 3kzu_A 213 ------------------SLAGFA-----------ACKALSTE--------RNDDP-----------------TAASRPY 238 (428)
T ss_dssp ------------------HHHHHH-----------HTTCBCCS--------CTTSG-----------------GGTCCTT
T ss_pred ------------------HHHHHH-----------HccccccC--------ccCCc-----------------ccccCCc
Confidence 000000 00001000 00000 0011221
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Cc
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LS 683 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~s 683 (814)
++ ..|+..++|||+++||++++.|+++|.+|+++|+|++...+ .|...+.++..+++++|+++++ .+
T Consensus 239 -d~------~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~ 311 (428)
T 3kzu_A 239 -DE------DRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPD 311 (428)
T ss_dssp -BT------TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred -cc------CCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 11 13667799999999999999999999999999999998764 5666667888999999999999 68
Q ss_pred ceeEehhh
Q psy12877 684 QFWYDENT 691 (814)
Q Consensus 684 q~~y~e~t 691 (814)
|++|+|-.
T Consensus 312 dId~ve~H 319 (428)
T 3kzu_A 312 EIDYINAH 319 (428)
T ss_dssp GCCEEECC
T ss_pred HeeEEEec
Confidence 99999853
No 56
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.71 E-value=5.5e-17 Score=183.46 Aligned_cols=192 Identities=24% Similarity=0.325 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcCCC
Q psy12877 403 TKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAGLP 452 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~Gl~ 452 (814)
.+|+.+|+++||+|+|+++++|| ++++|+..+.. .....+..++..+|+.
T Consensus 94 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~ 173 (430)
T 1ox0_A 94 SLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGAN 173 (430)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCC
Confidence 47999999999999999999999 58888654320 0113577888899995
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHH
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMG 532 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg 532 (814)
.|.++++++|+||+.||..|+++|++|++|++||+|+|.+.. |. . +
T Consensus 174 --Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~------------------~------------~- 219 (430)
T 1ox0_A 174 --GVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PF------------------A------------I- 219 (430)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HH------------------H------------H-
T ss_pred --CceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH------------------H------------H-
Confidence 599999999999999999999999999999999999998641 10 0 0
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQK 612 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~ 612 (814)
. .+. ..+.+. +++.+.. ..+| |++
T Consensus 220 -----------------~-----~~~------~~~~ls--------------------~~~~p~~-------~~~p-Fd~ 243 (430)
T 1ox0_A 220 -----------------A-----GFQ------ALTALS--------------------TTEDPTR-------ASIP-FDK 243 (430)
T ss_dssp -----------------H-----HHH------HTTCBC--------------------CCSSTTS-------SSCT-TBT
T ss_pred -----------------H-----HHH------hCCCcc--------------------CCCCCCC-------CCCC-CCC
Confidence 0 000 000000 0000000 0111 221
Q ss_pred CCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Cccee
Q psy12877 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQFW 686 (814)
Q Consensus 613 ~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq~~ 686 (814)
..|++.++|||+++||++++.|++.|.+++++|+|++...+ .|...+.+...+++++|+++++ .+||+
T Consensus 244 ------~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId 317 (430)
T 1ox0_A 244 ------DRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVA 317 (430)
T ss_dssp ------TCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred ------CCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcC
Confidence 24677899999999999999999999999999999987654 3444566788899999999999 58999
Q ss_pred Eehh
Q psy12877 687 YDEN 690 (814)
Q Consensus 687 y~e~ 690 (814)
|.+-
T Consensus 318 ~ve~ 321 (430)
T 1ox0_A 318 YVNA 321 (430)
T ss_dssp CEEC
T ss_pred EEEE
Confidence 9873
No 57
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.71 E-value=1.6e-17 Score=187.77 Aligned_cols=191 Identities=18% Similarity=0.200 Sum_probs=141.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCCC--------------------------CChHHHHHHHHcC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAGL--------------------------GQAPCRQAVIFAG 450 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~~--------------------------~~~~a~~~a~~~G 450 (814)
+..+|+.+|+++||+|+|+++++|| ++++|+..+... ...++..++..+|
T Consensus 91 ~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 170 (428)
T 3mqd_A 91 RGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFK 170 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcC
Confidence 4678999999999999999999999 688887633210 2346788999999
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .|.++|+++|+||+.||+.|+++|++|++|++||+|+|+|+..+.. .
T Consensus 171 l~--gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~-----------------------------~ 219 (428)
T 3mqd_A 171 IK--GINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSV-----------------------------L 219 (428)
T ss_dssp CC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH-----------------------------H
T ss_pred CC--CceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHH-----------------------------H
Confidence 94 5999999999999999999999999999999999999998632110 0
Q ss_pred HHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccc
Q psy12877 531 MGNCAENTAKKFNI-SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATV 609 (814)
Q Consensus 531 mg~~Ae~~~~~~Gi-tre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~ 609 (814)
+ ...+. +++. ...|.+ ..+|
T Consensus 220 ~--------~~~~~ls~~~-------------~~~p~~-------------------------------------~~rp- 240 (428)
T 3mqd_A 220 F--------DAMGAMSSKY-------------NDTPST-------------------------------------ASRA- 240 (428)
T ss_dssp H--------HHTTCBCCTT-------------TTSGGG-------------------------------------SCCT-
T ss_pred H--------HHhhhhcccc-------------cCCccc-------------------------------------ccCc-
Confidence 0 00000 0000 000110 1112
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCC---CCchHHhHHHHHHHhcCCCccee
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID---FPIAPAFAIPTLLKNGGQLSQFW 686 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~---~~~g~~~A~~~~~~~~~~~sq~~ 686 (814)
|+. ..|...++|||++|||++++.|+++|.+|+++|+|++..++.... .+.++..+++++|+ ++.+||+
T Consensus 241 fd~------~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~~dId 312 (428)
T 3mqd_A 241 YDK------NRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVTSKID 312 (428)
T ss_dssp TBT------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCCSCCC
T ss_pred ccC------CCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCccccC
Confidence 111 124455999999999999999999999999999999988753322 46788899999999 5559999
Q ss_pred Eeh
Q psy12877 687 YDE 689 (814)
Q Consensus 687 y~e 689 (814)
|.|
T Consensus 313 ~ve 315 (428)
T 3mqd_A 313 YIN 315 (428)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 58
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=99.70 E-value=3.9e-17 Score=176.49 Aligned_cols=176 Identities=18% Similarity=0.112 Sum_probs=134.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++++++++..+|++ ..|+++++++|+|++.||.+|+++|++|.+|+|||+|+|.++...
T Consensus 86 ~~~~a~~v~~~lgl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~------------------- 145 (309)
T 2ebd_A 86 FPSTACLVQAQLKAK-GVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEAV------------------- 145 (309)
T ss_dssp SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGTC-------------------
T ss_pred CCcHHHHHHHHhCCC-CceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEeccccccc-------------------
Confidence 467999999999998 479999999999999999999999999999999999999976410
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
T Consensus 146 -------------------------------------------------------------------------------- 145 (309)
T 2ebd_A 146 -------------------------------------------------------------------------------- 145 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC--------CC-----CCC
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT--------EP-----IDF 236 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~--------~p-----~~~ 236 (814)
.|-...+++.++|||+|+||++.+.++ .|.+.....+ .| ...
T Consensus 146 -----------------~~~~~~~~~~~gdGaaA~vL~~~~~~~--------~i~~~~~~~~g~~~~~~~~p~~~~~~~~ 200 (309)
T 2ebd_A 146 -----------------DWEDRSTCVLFGDGAGAVVVTRSEDKS--------DILATRMYAEGSLEELLHADNCGYIRMK 200 (309)
T ss_dssp -----------------CTTCTTTTTTBCEEEEEEEEEECSSSC--------EEEEEEEEECGGGGGGEEECTTCCEEEC
T ss_pred -----------------CccchhhccccccccEEEEEEecCCCC--------ceeEEEEEecCCccceeEeCCCCeEEEc
Confidence 000012345688999999998765421 2333322211 01 000
Q ss_pred CC--------cHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHH
Q psy12877 237 PI--------APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIH 308 (814)
Q Consensus 237 ~~--------~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e 308 (814)
+. ....+++++|+++|++++|||++++|.+++.......+.||++++++..+ +-.+||+.++++...+.+
T Consensus 201 g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gh~~~As~~~~L~~ 278 (309)
T 2ebd_A 201 GRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNIPKEKVFVN--IQKYGNTSAASIPIALHE 278 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh--HhhhcchHHHHHHHHHHH
Confidence 11 23568999999999999999999999999988888889999998766432 345899999999998888
Q ss_pred HHHH
Q psy12877 309 LCHA 312 (814)
Q Consensus 309 ~v~q 312 (814)
++++
T Consensus 279 ~~~~ 282 (309)
T 2ebd_A 279 AIKE 282 (309)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 8765
No 59
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.68 E-value=4.6e-17 Score=184.06 Aligned_cols=196 Identities=22% Similarity=0.279 Sum_probs=145.0
Q ss_pred CHHHHHHHHHHHHHHHcCC-CCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANM-DKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFA 449 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl-~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~ 449 (814)
+..+|+.+|+++||+|||+ +++++| ++++|+..+.. .....+..++..+
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 3568999999999999999 998898 69999764320 0124688899999
Q ss_pred CCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 450 Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
|+. .|.++++++|+||+.||+.|+++|++|++|++|++|+|+++..... ..+.
T Consensus 167 gl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~-------------------~~~~------ 219 (431)
T 2ix4_A 167 GFQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSV-------------------AGFS------ 219 (431)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHH-------------------HHHH------
T ss_pred CCC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHH-------------------HHHH------
Confidence 995 5999999999999999999999999999999999999987632110 0000
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATV 609 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~ 609 (814)
.|++ ++.+|+.+++ .. .+|
T Consensus 220 ~~~~----ls~~~~~~~~---------------------------------------------~~-----------~~p- 238 (431)
T 2ix4_A 220 RSRA----LSTKFNSSPQ---------------------------------------------EA-----------SRP- 238 (431)
T ss_dssp HTTC----BCCTTTTCGG---------------------------------------------GS-----------CCT-
T ss_pred hccc----cCccccCCcc---------------------------------------------cc-----------ccc-
Confidence 0000 0001111110 00 011
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Cc
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LS 683 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~s 683 (814)
|+ ...|++.++|||+++||++++.|+++|.+++++|+|++..++ .|...+.+...+++++|+++++ .+
T Consensus 239 fd------~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~ 312 (431)
T 2ix4_A 239 FD------CDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPN 312 (431)
T ss_dssp TB------TTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred CC------CCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 11 124567799999999999999999999999999999998764 4544566788899999999999 68
Q ss_pred ceeEehh
Q psy12877 684 QFWYDEN 690 (814)
Q Consensus 684 q~~y~e~ 690 (814)
+++|.+-
T Consensus 313 dId~ve~ 319 (431)
T 2ix4_A 313 QIDYVNA 319 (431)
T ss_dssp GCCEEEC
T ss_pred HcCEEEE
Confidence 9999983
No 60
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=99.68 E-value=7.1e-17 Score=182.37 Aligned_cols=195 Identities=23% Similarity=0.271 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccC--------------------------CCCChHHHHHHHHcCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQA--------------------------GLGQAPCRQAVIFAGL 451 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~--------------------------~~~~~~a~~~a~~~Gl 451 (814)
...|+.+|+++||+|||+++++|| ++++|+..+. ......+..++..+|+
T Consensus 88 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 167 (427)
T 3ho9_A 88 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 167 (427)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence 467999999999999999999999 5888865321 0122467788999999
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
. .|.++++++|+||+.||+.|+++|++|++|++||+|+|+++.... ... +
T Consensus 168 ~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~-------------------~~~---------~ 217 (427)
T 3ho9_A 168 R--GPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLG-------------------VGG---------F 217 (427)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH-------------------HHH---------H
T ss_pred C--CCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHH-------------------HHH---------H
Confidence 5 599999999999999999999999999999999999999862100 000 0
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
.. .+.+... ++. . -...+|+-.
T Consensus 218 --------~~------------------------~~~ls~~-------------------~~~-----~--~~~~~pfd~ 239 (427)
T 3ho9_A 218 --------GA------------------------ARALSTR-------------------NDN-----P--QAASRPWDK 239 (427)
T ss_dssp --------HH------------------------TTCBCCC-------------------TTC-----H--HHHCCTTBT
T ss_pred --------Hh------------------------ccCcccC-------------------CCC-----C--CcccCCccC
Confidence 00 0000000 000 0 001122211
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Ccce
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQF 685 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq~ 685 (814)
..|...++|||++|||++++.|+++|.+|+++|+|++...+ .|...+.+...+++++|+++++ .+|+
T Consensus 240 -------~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI 312 (427)
T 3ho9_A 240 -------ERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQI 312 (427)
T ss_dssp -------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred -------CCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 12445599999999999999999999999999999998764 4555667888999999999999 6899
Q ss_pred eEehhh
Q psy12877 686 WYDENT 691 (814)
Q Consensus 686 ~y~e~t 691 (814)
+|.+-.
T Consensus 313 d~ve~H 318 (427)
T 3ho9_A 313 GYVNAH 318 (427)
T ss_dssp CEEECC
T ss_pred cEEEec
Confidence 999844
No 61
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.68 E-value=5e-17 Score=182.63 Aligned_cols=196 Identities=21% Similarity=0.286 Sum_probs=141.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcce----EEEEecccCC--------------------------CCChHHHHHHHHcC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQAG--------------------------LGQAPCRQAVIFAG 450 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~~--------------------------~~~~~a~~~a~~~G 450 (814)
+..+|+.+|+++||+|+|+++++||. +++|+..+.. .....+..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 35789999999999999999999995 6666543211 01246788888999
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .|.++++++|+||+.||+.|+++|++|++|++|++|+|.+.. |. . .
T Consensus 150 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~------------------~-----------~ 197 (408)
T 1j3n_A 150 FT--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT-PM------------------A-----------I 197 (408)
T ss_dssp CC--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HH------------------H-----------H
T ss_pred CC--CceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HH------------------H-----------H
Confidence 95 499999999999999999999999999999999999998531 10 0 0
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
.+....+++..++.+++. ..+| |
T Consensus 198 ~~~~~~~~ls~~~~~p~~--------------------------------------------------------~~~p-f 220 (408)
T 1j3n_A 198 GAFAVMRALSTRNEEPEK--------------------------------------------------------ASRP-F 220 (408)
T ss_dssp HHHHHTTCBCCCTTCHHH--------------------------------------------------------HCCT-T
T ss_pred HHHHhcccccCCCCCCCc--------------------------------------------------------Cccc-C
Confidence 000000000001110000 0111 1
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Ccc
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQ 684 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq 684 (814)
+ ...|+..++|||+++||++++.|++.|.+++++|+|++...+ .|...+.+...+++++|+++++ .+|
T Consensus 221 d------~~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~d 294 (408)
T 1j3n_A 221 T------LSRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQ 294 (408)
T ss_dssp B------TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred c------CCCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 1 013566799999999999999999999999999999997754 3444566778899999999999 589
Q ss_pred eeEehhh
Q psy12877 685 FWYDENT 691 (814)
Q Consensus 685 ~~y~e~t 691 (814)
++|.+-.
T Consensus 295 Id~ve~H 301 (408)
T 1j3n_A 295 VGYINAH 301 (408)
T ss_dssp CCEEECC
T ss_pred cCEEEEe
Confidence 9999744
No 62
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.68 E-value=1.5e-16 Score=180.78 Aligned_cols=196 Identities=20% Similarity=0.247 Sum_probs=142.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCc-c----eEEEEecccC--------------------------CCCChHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDV-Q----EVYMGNVCQA--------------------------GLGQAPCRQAVIFA 449 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dI-D----~vivG~~~~~--------------------------~~~~~~a~~~a~~~ 449 (814)
+..+|+.+|+++||+|||+++++| | ++++|+..+. ......+..++..+
T Consensus 101 ~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 180 (451)
T 4ddo_A 101 RFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKH 180 (451)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHh
Confidence 356799999999999999999999 8 6888875321 11234577889999
Q ss_pred CCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 450 Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
|+. .|.++++++|+||+.||..|+++|++|++|+|||+|+|+++...
T Consensus 181 gl~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~------------------------------- 227 (451)
T 4ddo_A 181 RFR--GPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKV------------------------------- 227 (451)
T ss_dssp TCC--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHH-------------------------------
T ss_pred cCC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHH-------------------------------
Confidence 994 59999999999999999999999999999999999999865210
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATV 609 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~ 609 (814)
.+. .+... .+.... |.++ .....+|+
T Consensus 228 ~~~-----------------------~~~~~-~~ls~~-~~~~-----------------------------~~~~~~pf 253 (451)
T 4ddo_A 228 SLG-----------------------GFAAA-RALSTG-FSEE-----------------------------PVRASRPF 253 (451)
T ss_dssp HHH-----------------------HHHHT-TCBCCS-CTTS-----------------------------GGGSCCTT
T ss_pred HHH-----------------------HHHHH-hhhccC-CCcC-----------------------------cccccccc
Confidence 000 00000 000000 1110 00111222
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCC------CchHHhHHHHHHHhcCC-C
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF------PIAPAFAIPTLLKNGGQ-L 682 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~------~~g~~~A~~~~~~~~~~-~ 682 (814)
++ ..|++.++|||++|||++++.|+++|.+|+++|+|++...+ +..+ +.+...+++++|+++|+ .
T Consensus 254 -d~------~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d-~~~~~~~~~~~~~~~~ai~~al~~Agl~~ 325 (451)
T 4ddo_A 254 -DR------DRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTAD-AYHMTAGPDDGSGAMRAMKLALRMGDVAP 325 (451)
T ss_dssp -BT------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-CSCSSCCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred -cc------CCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecC-CCccCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 11 13667799999999999999999999999999999998764 3222 23557899999999999 5
Q ss_pred cceeEehhh
Q psy12877 683 SQFWYDENT 691 (814)
Q Consensus 683 sq~~y~e~t 691 (814)
+||+|++-.
T Consensus 326 ~dId~ve~H 334 (451)
T 4ddo_A 326 EQVDYVNAH 334 (451)
T ss_dssp GGCCEEECC
T ss_pred HHcCEEEec
Confidence 899999743
No 63
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=99.68 E-value=1.7e-16 Score=178.58 Aligned_cols=194 Identities=20% Similarity=0.240 Sum_probs=143.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccC-----------------C---------CCChHHHHHHHHcC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQA-----------------G---------LGQAPCRQAVIFAG 450 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~-----------------~---------~~~~~a~~~a~~~G 450 (814)
+..+|+.+|+++||+|||+++++|| +|++|+..+. . .....+..++..+|
T Consensus 73 ~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 152 (413)
T 3o04_A 73 RFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFG 152 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhC
Confidence 3467999999999999999999999 8999976321 0 11234778999999
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .|.++++++|+|++.||..|+++|++|++|+|||+|+|++..... .
T Consensus 153 l~--gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~------------------------------~ 200 (413)
T 3o04_A 153 AK--GINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMS------------------------------L 200 (413)
T ss_dssp CC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHH------------------------------H
T ss_pred CC--CcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHH------------------------------H
Confidence 95 599999999999999999999999999999999999998642100 0
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
. .+ ...+.+.... + .+. ..+| |
T Consensus 201 ~------------------------~~------~~~~~ls~~~------~----------p~~-----------~~~p-f 222 (413)
T 3o04_A 201 A------------------------GF------TANKALSLNP------D----------PET-----------ACRP-F 222 (413)
T ss_dssp H------------------------HH------HHTTCBCCCC------C----------TTT-----------SCCT-T
T ss_pred H------------------------HH------HhcccccCCC------C----------CCC-----------CcCC-C
Confidence 0 00 0001111000 0 000 0111 1
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Ccc
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQ 684 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq 684 (814)
++ ..|+..++|||++|||++++.|+++|.+|+++|+|++...+ .|...+.+...+++++|+++++ .+|
T Consensus 223 d~------~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~d 296 (413)
T 3o04_A 223 DK------DRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDK 296 (413)
T ss_dssp BT------TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGG
T ss_pred cC------CCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 11 12455699999999999999999999999999999998764 3444455678899999999999 689
Q ss_pred eeEehh
Q psy12877 685 FWYDEN 690 (814)
Q Consensus 685 ~~y~e~ 690 (814)
++|++-
T Consensus 297 Id~ve~ 302 (413)
T 3o04_A 297 VDYINA 302 (413)
T ss_dssp CCEEEC
T ss_pred cCEEEE
Confidence 999985
No 64
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=99.67 E-value=6.2e-17 Score=175.29 Aligned_cols=176 Identities=15% Similarity=0.130 Sum_probs=133.0
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++.+++++..+|++ ..|+++++++|+|++.||.+|+++|++|.+|+|||+|+|.+|....
T Consensus 87 ~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~~------------------ 147 (313)
T 1zow_A 87 FPTVANMLQERLGTG-KVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKITD------------------ 147 (313)
T ss_dssp SSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGTCC------------------
T ss_pred CCcHHHHHHHHhCCC-CCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccccC------------------
Confidence 457899999999997 4899999999999999999999999999999999999999764100
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+
T Consensus 148 -------~------------------------------------------------------------------------ 148 (313)
T 1zow_A 148 -------L------------------------------------------------------------------------ 148 (313)
T ss_dssp -------T------------------------------------------------------------------------
T ss_pred -------c------------------------------------------------------------------------
Confidence 0
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-----C---CC-----CC
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----E---PI-----DF 236 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-----~---p~-----~~ 236 (814)
+ + ..++..++|||+|+||++.+.. . .|.+....++ . |. .+
T Consensus 149 ------------~----d---~~~~~~~gdGa~A~vl~~~~~~----~----~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (313)
T 1zow_A 149 ------------T----D---RSTAVLFGDGAGAVIIGEVSEG----R----GIISYEMGSDGTGGKHLYLDKDTGKLKM 201 (313)
T ss_dssp ------------T----C---HHHHTTBCEEEEEEEEEECSTT----C----EEEEEEEEECGGGGGGEEECTTTCCEEE
T ss_pred ------------c----c---ccceeeeccceEEEEEEecCCC----C----ceeEEEEEEcCCCcCeEEecCCCCeeEe
Confidence 0 0 0013347799999999865431 1 3444322111 0 11 00
Q ss_pred -C--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHH
Q psy12877 237 -P--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVI 307 (814)
Q Consensus 237 -~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~ 307 (814)
+ .....+++++|+++|++++|||+|++|.+++...-...+.||++++++..+ +-.+||+.++++...+.
T Consensus 202 ~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~as~~~~L~ 279 (313)
T 1zow_A 202 NGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIMESARERLGISKDKMSVS--VNKYGNTSAASIPLSID 279 (313)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHh--HhhhCchHHHHHHHHHH
Confidence 1 133568999999999999999999999999998888889999998766432 34589999999998888
Q ss_pred HHHHH
Q psy12877 308 HLCHA 312 (814)
Q Consensus 308 e~v~q 312 (814)
+++++
T Consensus 280 ~~~~~ 284 (313)
T 1zow_A 280 QELKN 284 (313)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 87665
No 65
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.66 E-value=3.8e-16 Score=176.75 Aligned_cols=194 Identities=20% Similarity=0.278 Sum_probs=144.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAG 450 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~G 450 (814)
...+|+.+|+++||+|||+++++|| +|++|+..+.. .....+..++..+|
T Consensus 97 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (437)
T 2gqd_A 97 RFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLG 176 (437)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhC
Confidence 3567999999999999999999999 99999765420 01246888999999
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIH 530 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (814)
+. .|.++++++|+||+.||..|+++|++|++|++||+|+|.+.. |. ....
T Consensus 177 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~------------------~~~~--------- 226 (437)
T 2gqd_A 177 AK--GPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HM------------------AIAG--------- 226 (437)
T ss_dssp CC--SSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HH------------------HHHH---------
T ss_pred CC--CceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH------------------HHHH---------
Confidence 95 499999999999999999999999999999999999998642 10 0000
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccccc
Q psy12877 531 MGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610 (814)
Q Consensus 531 mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f 610 (814)
+ .. .+.+.. ++.+. ...+| |
T Consensus 227 ~--------~~------------------------~~~ls~--------------------~~~p~-------~~~~p-f 246 (437)
T 2gqd_A 227 F--------SA------------------------SRALST--------------------NDDIE-------TACRP-F 246 (437)
T ss_dssp H--------HH------------------------TTCBCC--------------------CCCTT-------TSSCT-T
T ss_pred H--------Hh------------------------ccCccC--------------------CCCCc-------cccCC-C
Confidence 0 00 000000 00000 01223 2
Q ss_pred ccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCC-Ccc
Q psy12877 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQ-LSQ 684 (814)
Q Consensus 611 ~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~-~sq 684 (814)
++ ..|++.++|||++|||++++.|+++|.+++++|+|++...+. |...+.+...+++++|+++++ .+|
T Consensus 247 d~------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~d 320 (437)
T 2gqd_A 247 QE------GRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKD 320 (437)
T ss_dssp CT------TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGG
T ss_pred CC------CCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhh
Confidence 21 146777999999999999999999999999999999987664 333345667899999999999 589
Q ss_pred eeEehh
Q psy12877 685 FWYDEN 690 (814)
Q Consensus 685 ~~y~e~ 690 (814)
|+|.+-
T Consensus 321 Id~ve~ 326 (437)
T 2gqd_A 321 VQYLNA 326 (437)
T ss_dssp CCEEEC
T ss_pred CCEEEE
Confidence 999984
No 66
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=99.66 E-value=1.8e-16 Score=172.40 Aligned_cols=205 Identities=18% Similarity=0.100 Sum_probs=145.6
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++++++++..+|+ .+|+++++++|+|++.||.+|+++|++|.+|+|||+|+|.+|....
T Consensus 86 ~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~~------------------ 145 (322)
T 1ub7_A 86 FPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKIID------------------ 145 (322)
T ss_dssp ESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTSC------------------
T ss_pred CCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEechhccccC------------------
Confidence 35689999999999 6899999999999999999999999999999999999999764100
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+
T Consensus 146 -------~------------------------------------------------------------------------ 146 (322)
T 1ub7_A 146 -------W------------------------------------------------------------------------ 146 (322)
T ss_dssp -------T------------------------------------------------------------------------
T ss_pred -------h------------------------------------------------------------------------
Confidence 0
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEE-EEEEEecCC----------CCCC--
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARI-IAYFDAATE----------PIDF-- 236 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I-~g~~~~~~~----------p~~~-- 236 (814)
+ + ..++..++|||+|+||.+.+. +.+.++.+ .+.+...+. |...
T Consensus 147 ------------~----d---~~~~~~~GdGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~ 203 (322)
T 1ub7_A 147 ------------N----D---RATAVLFGDGGGAAVVGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSM 203 (322)
T ss_dssp ------------T----C---HHHHTTBCCEEEEEEEECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBC
T ss_pred ------------h----h---cccceeeccccEEEEEEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccc
Confidence 0 0 011234779999999987643 11222222 222111110 2210
Q ss_pred -------C--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCCh
Q psy12877 237 -------P--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMS 301 (814)
Q Consensus 237 -------~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gas 301 (814)
+ .....+++++|+++|++++|||+|+.|.+++...-...+.||++++++..+ +-.+||..+++
T Consensus 204 ~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~As 281 (322)
T 1ub7_A 204 KNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVN--VDRYGNTSTAS 281 (322)
T ss_dssp CSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCC--HHHHCBCGGGH
T ss_pred cceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHHHHH--HHhhCcHHHHH
Confidence 1 134568999999999999999999999999888777889999988776532 33589999999
Q ss_pred HHHHHHHHHHHHHc--CCCCCccccccCccccccccceeEEecCCcceeEEEecC
Q psy12877 302 GARIVIHLCHALKS--GQKGQLSQFWYDENTTQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 302 G~~~l~e~v~qLr~--g~~gl~~~~~~~~~~~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
+...+.+++++-+- +++.+ .+.++.|+...+++|+.|
T Consensus 282 ~~~~l~~~l~~g~~~~g~~~l----------------~~~~G~G~~~~~~vl~~~ 320 (322)
T 1ub7_A 282 IPLALKEAVDAGRIREGDHVL----------------LVSFGAGLTWAAAVLTWG 320 (322)
T ss_dssp HHHHHHHHHHHTSSCTTCEEE----------------EEEEETTTEEEEEEEECC
T ss_pred HHHHHHHHHHhCCCCCCCEEE----------------EEEEChhheeEEEEEEeC
Confidence 99877776554211 22222 233666778888888764
No 67
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.65 E-value=6.1e-16 Score=174.16 Aligned_cols=193 Identities=19% Similarity=0.190 Sum_probs=141.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------------------CCChHHHHHHHHcC
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFAG 450 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~G 450 (814)
+..+|+.+++++||+|+|+++++|| ++++|+..+.. .....+..++..+|
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 4578999999999999999999999 78888763321 12457888999999
Q ss_pred CCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeecc-ccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 451 LPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM-SNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 451 l~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~-s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
+. .|.++++++|+||+.||+.|+++|++| +|++|++|+|.+ +...+
T Consensus 158 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~------------------------------ 204 (415)
T 1tqy_B 158 MR--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGW------------------------------ 204 (415)
T ss_dssp CC--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHH------------------------------
T ss_pred CC--CceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHH------------------------------
Confidence 95 589999999999999999999999999 999999999984 31100
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccc
Q psy12877 530 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATV 609 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~ 609 (814)
. .+ ...+.+.. .+ +.|.. .+|
T Consensus 205 -~------------------------~~------~~~~~ls~-------~~---------~~~~~-----------~~p- 225 (415)
T 1tqy_B 205 -V------------------------SQ------IASGRIST-------AT---------DPDRA-----------YLP- 225 (415)
T ss_dssp -H------------------------HH------HTTSCBCC-------CS---------CGGGS-----------CCT-
T ss_pred -H------------------------HH------HhccCccC-------CC---------CCCCC-----------cCC-
Confidence 0 00 00000000 00 00000 111
Q ss_pred cccCCCccccCCCCccchhhhhhhhcCHHHHHHcCC-CceEEEEEeeeccCCCCCCCc--hHHhHHHHHHHhcCC-Ccce
Q psy12877 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA-KPLARIIAYFDAATEPIDFPI--APAFAIPTLLKNGGQ-LSQF 685 (814)
Q Consensus 610 f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~-~p~a~I~g~~~~~~~p~~~~~--g~~~A~~~~~~~~~~-~sq~ 685 (814)
|++ ..|.+.++|||+++||++++.|+++|. +++++|+|++...+....... +...+++++|+++++ .+||
T Consensus 226 fd~------~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dI 299 (415)
T 1tqy_B 226 FDE------RAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDV 299 (415)
T ss_dssp TST------TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGC
T ss_pred CCC------CCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHC
Confidence 111 136778999999999999999999999 999999999987663221111 778899999999999 5899
Q ss_pred eEehhh
Q psy12877 686 WYDENT 691 (814)
Q Consensus 686 ~y~e~t 691 (814)
+|.+-.
T Consensus 300 d~ve~H 305 (415)
T 1tqy_B 300 DVVFAD 305 (415)
T ss_dssp CEEECC
T ss_pred CEEEEe
Confidence 999843
No 68
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.65 E-value=7.2e-16 Score=174.56 Aligned_cols=193 Identities=22% Similarity=0.241 Sum_probs=144.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCC-cCcc----eEEEEecccCC--------------------------CCChHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANMDK-SDVQ----EVYMGNVCQAG--------------------------LGQAPCRQAVIFA 449 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~-~dID----~vivG~~~~~~--------------------------~~~~~a~~~a~~~ 449 (814)
+..+|+.+|+++||+|||+++ ++|| +|++|+..+.. .....+..++..+
T Consensus 96 ~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 175 (438)
T 2iwz_A 96 SPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRY 175 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHh
Confidence 356799999999999999998 8888 68999764321 1234788899999
Q ss_pred CCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 450 Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
|+. .|.++++++|+|++.||..|+++|++|++|++||+|+|.+.. |.. ...
T Consensus 176 gl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~------------------~~~-------- 226 (438)
T 2iwz_A 176 KLK--GPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PLS------------------LAG-------- 226 (438)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHH------------------HHH--------
T ss_pred CCC--CceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HHH------------------HHH--------
Confidence 995 499999999999999999999999999999999999998532 110 000
Q ss_pred cHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccc
Q psy12877 530 HMGNCAENTAKKFNI-SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 608 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gi-tre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p 608 (814)
+ ...|. ++. .+|.+ ..+|
T Consensus 227 -~--------~~~~~ls~~---------------~~p~~-------------------------------------~~~p 245 (438)
T 2iwz_A 227 -F--------SRARALSTN---------------SDPKL-------------------------------------ACRP 245 (438)
T ss_dssp -H--------HHTTCBCCC---------------SCTTT-------------------------------------SCCT
T ss_pred -H--------HhcCCcCCC---------------CCCCc-------------------------------------cccc
Confidence 0 00000 000 00110 1122
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCC-C
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQ-L 682 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~-~ 682 (814)
|++ ..|.+.++|||+++||++++.|+++|.+++++|+|++..++. |...+.+...+++++|+++++ .
T Consensus 246 -fd~------~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p 318 (438)
T 2iwz_A 246 -FHP------KRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQP 318 (438)
T ss_dssp -TCT------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred -CCC------CCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 221 124567999999999999999999999999999999987664 444556778899999999999 5
Q ss_pred cceeEehh
Q psy12877 683 SQFWYDEN 690 (814)
Q Consensus 683 sq~~y~e~ 690 (814)
+||+|.+-
T Consensus 319 ~dId~ve~ 326 (438)
T 2iwz_A 319 EEISYINA 326 (438)
T ss_dssp GGCCEEEC
T ss_pred HHcCEEEe
Confidence 89999984
No 69
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.65 E-value=3.7e-16 Score=175.29 Aligned_cols=189 Identities=16% Similarity=0.183 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcce-----EEEEecccCC-------------C--------------CChHHHHHHHHc
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQE-----VYMGNVCQAG-------------L--------------GQAPCRQAVIFA 449 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~-----vivG~~~~~~-------------~--------------~~~~a~~~a~~~ 449 (814)
..+|+.+++++||+|||++++++|. |++|+..+.. . ....+..++..+
T Consensus 71 ~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 150 (406)
T 2vba_A 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF 150 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhc
Confidence 5679999999999999999988886 9999775431 1 124678888889
Q ss_pred CCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccc
Q psy12877 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKI 529 (814)
Q Consensus 450 Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (814)
|+. .|.++++++|+||+.||+.|+++|++|++|++||+|+|.++.... ..
T Consensus 151 gl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~-------------------~~--------- 200 (406)
T 2vba_A 151 KIH--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMA-------------------CE--------- 200 (406)
T ss_dssp TCC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH-------------------HH---------
T ss_pred cCC--CceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHH-------------------HH---------
Confidence 994 599999999999999999999999999999999999999753100 00
Q ss_pred cHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccc
Q psy12877 530 HMGNCAENTAKKFNI-SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 608 (814)
Q Consensus 530 ~mg~~Ae~~~~~~Gi-tre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p 608 (814)
+ .+.|. +++ + ..+|.+. .||
T Consensus 201 -~--------~~~~~ls~~----------~---~~~p~~~-------------------------------------~~p 221 (406)
T 2vba_A 201 -F--------DAMGALSTK----------Y---NDTPEKA-------------------------------------SRT 221 (406)
T ss_dssp -H--------HHTTCBCCS----------C---TTSGGGS-------------------------------------CCT
T ss_pred -H--------hhccccccc----------c---CCCCccc-------------------------------------cCc
Confidence 0 11111 000 0 0011111 111
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcCCCc
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGGQLS 683 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~~~s 683 (814)
|++ ..|...++|||+++||++++.|+++|.+++++|+|++...+. |. +.+...+++++|++++ +
T Consensus 222 -fd~------~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~--~~~~~~ai~~al~~ag--~ 290 (406)
T 2vba_A 222 -YDA------HRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHGVD--T 290 (406)
T ss_dssp -TBT------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCC--SHHHHHHHHHHHTTCC--S
T ss_pred -CcC------CCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC--HHHHHHHHHHHHhhCC--C
Confidence 211 134566999999999999999999999999999999987662 32 5577889999999999 9
Q ss_pred ceeEehh
Q psy12877 684 QFWYDEN 690 (814)
Q Consensus 684 q~~y~e~ 690 (814)
|++|.+-
T Consensus 291 dId~ve~ 297 (406)
T 2vba_A 291 PIDYLNS 297 (406)
T ss_dssp CCCEEEC
T ss_pred CccEEEe
Confidence 9999985
No 70
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.65 E-value=2.4e-16 Score=177.34 Aligned_cols=193 Identities=19% Similarity=0.204 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCCC--------------------------CChHHHHHHHHcCC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAGL--------------------------GQAPCRQAVIFAGL 451 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~~--------------------------~~~~a~~~a~~~Gl 451 (814)
..+|+.+++++||+|||+ +++| +|++|+..+... ....+..++..+|+
T Consensus 83 ~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 160 (416)
T 2wge_A 83 VQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA 160 (416)
T ss_dssp HHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc
Confidence 457999999999999998 4555 388887654221 11357788889999
Q ss_pred CCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccH
Q psy12877 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHM 531 (814)
Q Consensus 452 ~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 531 (814)
. .|.++++++|+||+.||+.|+++|++|++|++|++|+|.++.... ..
T Consensus 161 ~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~------------------------------~~ 208 (416)
T 2wge_A 161 R--AGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALP------------------------------IA 208 (416)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHH------------------------------HH
T ss_pred C--CCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHH------------------------------HH
Confidence 4 699999999999999999999999999999999999998753100 00
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccc
Q psy12877 532 GNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611 (814)
Q Consensus 532 g~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~ 611 (814)
+. ...+.+.. +... .|.. .+| |+
T Consensus 209 ~~------------------------------~~~~~l~~---------~~~~------~~~~-----------~~p-fd 231 (416)
T 2wge_A 209 AF------------------------------SMMRAMST---------RNDE------PERA-----------SRP-FD 231 (416)
T ss_dssp HH------------------------------HTTTCBCC---------CTTS------GGGS-----------CCT-TB
T ss_pred HH------------------------------Hhcchhhc---------cccC------Cccc-----------ccc-cc
Confidence 00 00000100 0000 0000 111 11
Q ss_pred cCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-Ccce
Q psy12877 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-LSQF 685 (814)
Q Consensus 612 ~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~sq~ 685 (814)
...|++.++|||+++||++++.|+++|.+|+++|+|++...+ .|...+.++..+++++|+++++ .+|+
T Consensus 232 ------~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dI 305 (416)
T 2wge_A 232 ------KDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADI 305 (416)
T ss_dssp ------TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred ------cCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHC
Confidence 124677899999999999999999999999999999997763 4555667888999999999998 6899
Q ss_pred eEehhh
Q psy12877 686 WYDENT 691 (814)
Q Consensus 686 ~y~e~t 691 (814)
+|.|-.
T Consensus 306 d~ve~H 311 (416)
T 2wge_A 306 DHVNAH 311 (416)
T ss_dssp CEEECC
T ss_pred CEEEEC
Confidence 999833
No 71
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.64 E-value=8.4e-16 Score=173.65 Aligned_cols=191 Identities=18% Similarity=0.144 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHHHHcCCC---CcCcceEEEEecccCCC--------------------------CChHHHHHHHHcCCC
Q psy12877 402 ATKLGAVAIESAIQKANMD---KSDVQEVYMGNVCQAGL--------------------------GQAPCRQAVIFAGLP 452 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~---~~dID~vivG~~~~~~~--------------------------~~~~a~~~a~~~Gl~ 452 (814)
..+|+.+++++||+|||++ +++| ++++|+..+... ....+..++..+|+.
T Consensus 99 ~~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~ 177 (434)
T 2gp6_A 99 LQRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAK 177 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCC
Confidence 4679999999999999983 3333 578887643210 113577889999994
Q ss_pred CCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHH
Q psy12877 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMG 532 (814)
Q Consensus 453 ~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg 532 (814)
.|.++++++|+|++.||..|+++|++|++|++|++|+|.++....
T Consensus 178 --Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~--------------------------------- 222 (434)
T 2gp6_A 178 --AGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVP--------------------------------- 222 (434)
T ss_dssp --SCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHH---------------------------------
T ss_pred --CCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH---------------------------------
Confidence 599999999999999999999999999999999999998753100
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHH----hhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhcccc
Q psy12877 533 NCAENTAKKFNISRDEQDEYALSSYKKSAD----AYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 608 (814)
Q Consensus 533 ~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~----a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p 608 (814)
++..++.++.. .+|.+ . .+|
T Consensus 223 -------------------~~~~~~~~~~ls~~~~~p~~----~---------------------------------~~p 246 (434)
T 2gp6_A 223 -------------------IAGFAQMRIVMSTNNDDPAG----A---------------------------------CRP 246 (434)
T ss_dssp -------------------HHHHHTTTSSCCCCTTCTTT----S---------------------------------CCS
T ss_pred -------------------HHHHHHHHHHhcCCCCCCCC----c---------------------------------eec
Confidence 00000000000 01111 0 011
Q ss_pred ccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccC-----CCCCCCchHHhHHHHHHHhcCC-C
Q psy12877 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-----EPIDFPIAPAFAIPTLLKNGGQ-L 682 (814)
Q Consensus 609 ~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~-----~p~~~~~g~~~A~~~~~~~~~~-~ 682 (814)
|+ ...|++.++|||+++||++++.|++.|.+++++|+|++...+ .|...+.+...+++++|+++++ .
T Consensus 247 -fd------~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~ 319 (434)
T 2gp6_A 247 -FD------RDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAP 319 (434)
T ss_dssp -SB------TTCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCT
T ss_pred -cc------ccCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCH
Confidence 11 013566799999999999999999999999999999997764 3444556778899999999999 6
Q ss_pred cceeEehhh
Q psy12877 683 SQFWYDENT 691 (814)
Q Consensus 683 sq~~y~e~t 691 (814)
+|++|.+-.
T Consensus 320 ~dId~ve~H 328 (434)
T 2gp6_A 320 GDIDHVNAH 328 (434)
T ss_dssp TTEEEEECC
T ss_pred HHcCEEEEe
Confidence 899999854
No 72
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=99.64 E-value=4.1e-16 Score=170.50 Aligned_cols=172 Identities=17% Similarity=0.103 Sum_probs=126.7
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++++.+++..+|++ .+|+++++++|+|++.||.+|+++|++|.+|+|||+|+|.+|...
T Consensus 97 ~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~------------------- 156 (335)
T 1u6e_A 97 TPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSPTI------------------- 156 (335)
T ss_dssp SSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGGGC-------------------
T ss_pred CChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccccc-------------------
Confidence 467899999999997 689999999999999999999999999999999999999976310
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
T Consensus 157 -------------------------------------------------------------------------------- 156 (335)
T 1u6e_A 157 -------------------------------------------------------------------------------- 156 (335)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-------------CCCC-
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-------------EPID- 235 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-------------~p~~- 235 (814)
.|....+++.++|||+|+||.+.+. .+..+. .+.+.+.... +|..
T Consensus 157 -----------------~~~d~~~~~~~gDGA~A~vl~~~~~---~~i~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 215 (335)
T 1u6e_A 157 -----------------DMYDRGNCFIFADGAAAVVVGETPF---QGIGPT-VAGSDGEQADAIRQDIDWITFAQNPSGP 215 (335)
T ss_dssp -----------------CTTCTTTTTTBCEEEEEEEEEECSS---CCBCCC-EEEECGGGGGGEEESSCHHHHHTSTTSC
T ss_pred -----------------CccccccceEeccccEEEEEEecCC---CCeeEE-EEEEcCCcccceeecCCccCcCCCccCc
Confidence 0001124567889999999987543 122121 2222221100 1110
Q ss_pred ---C---C--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC-CcccCCCCccccCCCCC
Q psy12877 236 ---F---P--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS-KVNVHGGAVSLGHPIGM 300 (814)
Q Consensus 236 ---~---~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~-~vN~~GG~la~Ghp~ga 300 (814)
+ + .....+++++|+++|++++|||+|++|++++.......+.||++++ ++..+ .--+||+.++
T Consensus 216 ~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~~~~~~~lg~~~~~~~~~~--~~~~Gnt~sA 293 (335)
T 1u6e_A 216 RPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVAND--IEHTGNTSAA 293 (335)
T ss_dssp CCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECCT--HHHHCBCGGG
T ss_pred cceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCchhhhhhh--hhhhCcHHHH
Confidence 0 1 1224689999999999999999999999999999999999999988 55443 2347998887
Q ss_pred hHHH
Q psy12877 301 SGAR 304 (814)
Q Consensus 301 sG~~ 304 (814)
+...
T Consensus 294 s~~~ 297 (335)
T 1u6e_A 294 SIPL 297 (335)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7543
No 73
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.63 E-value=1.8e-15 Score=170.82 Aligned_cols=194 Identities=19% Similarity=0.211 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC--------------CC-----------C--h-HHH----HH
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG--------------LG-----------Q--A-PCR----QA 445 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~--------------~~-----------~--~-~a~----~~ 445 (814)
..+|+.+++++||+|||+++++|| +|++|+..+.. .+ . + .+. .+
T Consensus 73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 152 (424)
T 1tqy_A 73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence 467999999999999999999999 69999764321 00 0 1 133 78
Q ss_pred HHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccc
Q psy12877 446 VIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDV 525 (814)
Q Consensus 446 a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (814)
+..+|+. .|.++++++|+|++.||+.|+++|++|++|++||+|+|.+.. |. ...
T Consensus 153 a~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~------------------~~~----- 206 (424)
T 1tqy_A 153 AWAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PI------------------VVA----- 206 (424)
T ss_dssp HHHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HH------------------HHH-----
T ss_pred HHhcCCC--CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HH------------------HHH-----
Confidence 8889995 599999999999999999999999999999999999998632 11 000
Q ss_pred cccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhc
Q psy12877 526 YNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKS 605 (814)
Q Consensus 526 ~~~~~mg~~Ae~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~ 605 (814)
.+ ...+.-. .+ ..+|.+ .
T Consensus 207 ----~~--------~~~~~ls----------~~---~~~p~~--------------------------~----------- 224 (424)
T 1tqy_A 207 ----CF--------DAIRATT----------AR---NDDPEH--------------------------A----------- 224 (424)
T ss_dssp ----HH--------HHTTCBC----------CC---CSCGGG--------------------------C-----------
T ss_pred ----HH--------Hhhcccc----------CC---CCCCCC--------------------------C-----------
Confidence 00 0000000 00 001111 0
Q ss_pred cccccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCC-----CCCCCchHHhHHHHHHHhcC
Q psy12877 606 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE-----PIDFPIAPAFAIPTLLKNGG 680 (814)
Q Consensus 606 ~~p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~-----p~~~~~g~~~A~~~~~~~~~ 680 (814)
.|| |++ ..|++.++|||++|||++++.|++.|.+++++|+|++...+. |...+.+...+++++|++++
T Consensus 225 ~rp-fd~------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~ag 297 (424)
T 1tqy_A 225 SRP-FDG------TRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESR 297 (424)
T ss_dssp CCT-TBT------TCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHT
T ss_pred ccC-CCC------CCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 112 211 146777999999999999999999999999999999987653 44445667889999999999
Q ss_pred C-CcceeEehh
Q psy12877 681 Q-LSQFWYDEN 690 (814)
Q Consensus 681 ~-~sq~~y~e~ 690 (814)
+ .+||+|.+-
T Consensus 298 l~~~dId~ve~ 308 (424)
T 1tqy_A 298 TDATDIDYINA 308 (424)
T ss_dssp CCGGGCCEEEC
T ss_pred CCHHHCCEEEe
Confidence 9 589999984
No 74
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.58 E-value=1.9e-14 Score=191.90 Aligned_cols=241 Identities=14% Similarity=0.115 Sum_probs=171.2
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
...++..++..+|| .+|+++|+++|+|++.||++|++.|++|+||++||||++.+.....
T Consensus 137 ~~~~a~ris~~~~l--~Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~------------------ 196 (2512)
T 2vz8_A 137 RAMMANRLSFFFDF--KGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNS------------------ 196 (2512)
T ss_dssp TTHHHHHHHHHHTC--CSCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHH------------------
T ss_pred hhHHHHHHHHHhCC--CCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHH------------------
Confidence 34588899999999 6999999999999999999999999999999999999998654100
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+...+ ..+. +.+|.
T Consensus 197 ----------------------------------~~~~~--------~~~~-------------------ls~~g----- 210 (2512)
T 2vz8_A 197 ----------------------------------SLQFM--------KLGM-------------------LSQDG----- 210 (2512)
T ss_dssp ----------------------------------HHHHH--------HTTC-------------------BCTTC-----
T ss_pred ----------------------------------HHHHc--------cCCC-------------------CCCCC-----
Confidence 00000 0111 11221
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC-C-----CCcHHHH
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-F-----PIAPAFA 243 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~-~-----~~~~~~a 243 (814)
+++|+..+.+|++ .+||+++|||.+.+.|+ +++|.|+|++.+.+.... . +.+...+
T Consensus 211 -------~c~~Fd~~adG~~-------~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~ 272 (2512)
T 2vz8_A 211 -------TCRSFDAEGTGYC-------RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQL 272 (2512)
T ss_dssp -------SCCSSSTTCCCBC-------BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHH
T ss_pred -------CCCCCCCCCCCcc-------eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHH
Confidence 3445554445666 66999999999999885 589999999998775321 1 2234679
Q ss_pred HHHHHHHcCCCCCCccEEecCCCchHH----HH-HHhhhcCCCC-CCcccCCCCccccCCCCChHHHHHHHHHHHHHc--
Q psy12877 244 IPTLLKNGGVAKQDVALWEINEAFSVV----VL-ANIKKLDIDP-SKVNVHGGAVSLGHPIGMSGARIVIHLCHALKS-- 315 (814)
Q Consensus 244 ~~~al~~aGl~~~DID~~e~~d~fa~~----~l-~~~e~lg~~~-~~vN~~GG~la~Ghp~gasG~~~l~e~v~qLr~-- 315 (814)
++++|++||++|+||||+|.|.+-+.. +. ...+.||-.. +|+-+..-+-.+||..||+|+..++.++..|++
T Consensus 273 i~~al~~ag~~p~~i~yveaHGTgT~~gD~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ 352 (2512)
T 2vz8_A 273 IRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGV 352 (2512)
T ss_dssp HHTTSGGGSSCTTSCCEEECCCCCCTTHHHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTB
T ss_pred HHHHHHHcCCCHHHCCEEEeecCCCCCCCHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCC
Confidence 999999999999999999999987742 22 2334455322 345454445558999999999999999999997
Q ss_pred --CCCCCcc----c-cccC-------ccc--cccccceeEEecCCcceeEEEecC
Q psy12877 316 --GQKGQLS----Q-FWYD-------ENT--TQRLSEEVVCRAGKEGSIALISCP 354 (814)
Q Consensus 316 --g~~gl~~----~-~~~~-------~~~--~~~~~~~~~~~ggG~g~a~ll~~~ 354 (814)
....+.. + .|.. ..+ ..+++.++.++.||.+.+++||.+
T Consensus 353 ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~ 407 (2512)
T 2vz8_A 353 WAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPN 407 (2512)
T ss_dssp CCCCSSCCSCCTTSSSSSSSSCEECCSCCBCCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred cCCCCCCCCCCccccccccCceEecCCCccCCCCeEEEeccCCCCceeEEEEccC
Confidence 1212111 1 0110 011 123677888888999999999854
No 75
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.56 E-value=1.3e-14 Score=177.39 Aligned_cols=190 Identities=21% Similarity=0.225 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcce----EEEEecccCCC-------------------CChHHHHHHHHcCCCCCccEE
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQAGL-------------------GQAPCRQAVIFAGLPKSTVCT 458 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~~~-------------------~~~~a~~~a~~~Gl~~~~~~~ 458 (814)
...|+.+++.+||+|||++++++|. |++|+...... ...++..++..+|+. .|.+
T Consensus 116 ~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~ 193 (917)
T 2hg4_A 116 QQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLE--GPAM 193 (917)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCC--SCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCC--CCeE
Confidence 3569999999999999999999995 88887644321 013577889999995 5999
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHH
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENT 538 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~ 538 (814)
+++++|+|++.||+.|+++|++|++|++|+||+|.++..... .
T Consensus 194 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~------------------------------~------- 236 (917)
T 2hg4_A 194 TVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAF------------------------------T------- 236 (917)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHH------------------------------H-------
T ss_pred eecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhh------------------------------H-------
Confidence 999999999999999999999999999999999998632100 0
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCccc
Q psy12877 539 AKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVT 618 (814)
Q Consensus 539 ~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt 618 (814)
. + ...+. + +.|. ..+| |+ +
T Consensus 237 --~----------~-----------~~~~~----l----------------s~~g-----------~~~p-Fd------~ 255 (917)
T 2hg4_A 237 --E----------F-----------RSQGG----L----------------AADG-----------RCKP-FS------K 255 (917)
T ss_dssp --H----------H-----------TTSSC----B----------------CTTS-----------CCCT-TB------T
T ss_pred --h----------h-----------hhccC----c----------------CCcc-----------ccCc-cc------c
Confidence 0 0 00000 0 0010 0111 21 2
Q ss_pred cCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCC-----CchHHhHHHHHHHhcCC-CcceeEehhh
Q psy12877 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF-----PIAPAFAIPTLLKNGGQ-LSQFWYDENT 691 (814)
Q Consensus 619 ~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~-----~~g~~~A~~~~~~~~~~-~sq~~y~e~t 691 (814)
..|++.++|||++|||.+.+.|++.|.+++++|+|++...+..... +.+...+++++|+++|+ .++|+|.|-.
T Consensus 256 ~adG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaH 334 (917)
T 2hg4_A 256 AADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAH 334 (917)
T ss_dssp TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred cccCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeec
Confidence 4678889999999999999999999999999999999876644322 23455799999999999 6899999843
No 76
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=99.55 E-value=8.1e-15 Score=158.95 Aligned_cols=179 Identities=17% Similarity=0.113 Sum_probs=130.2
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++++++++..+|++ ..|+++++++|+|++.||.+|+++|++|.+|+|||+|+|.+|....
T Consensus 87 ~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~~------------------ 147 (317)
T 1hnj_A 87 FPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCD------------------ 147 (317)
T ss_dssp SSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHHSC------------------
T ss_pred CCcHHHHHHHHhCCC-CCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccCC------------------
Confidence 457999999999997 4899999999999999999999999999999999999998653100
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+ +
T Consensus 148 -------~-----------------------------------------------------------------~------ 149 (317)
T 1hnj_A 148 -------P-----------------------------------------------------------------T------ 149 (317)
T ss_dssp -------T-----------------------------------------------------------------T------
T ss_pred -------c-----------------------------------------------------------------h------
Confidence 0 0
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEE-EEEecC---CCCC----------
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIA-YFDAAT---EPID---------- 235 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g-~~~~~~---~p~~---------- 235 (814)
+ ..++..++|||+|+||.+.+. ...++.+.+ .+...+ -|..
T Consensus 150 -----------------d---~~~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 204 (317)
T 1hnj_A 150 -----------------D---RGTIIIFGDGAGAAVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIH 204 (317)
T ss_dssp -----------------C---HHHHTTBCCEEEEEEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCS
T ss_pred -----------------h---cccceeeccccEEEEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCce
Confidence 0 001223679999999986542 123444433 221111 1110
Q ss_pred ---CCC--------cHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHH
Q psy12877 236 ---FPI--------APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGAR 304 (814)
Q Consensus 236 ---~~~--------~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~ 304 (814)
.+. ....+++++|+++|++++|||+|+.|...+...-...+.||++++++..+ .-.+||..++++..
T Consensus 205 ~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~~--~~~~Gn~~~As~~~ 282 (317)
T 1hnj_A 205 LTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVT--LDRHGNTSAASVPC 282 (317)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHH
T ss_pred EEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHhHhh--HhhhCcHHHHHHHH
Confidence 011 23568999999999999999999999999988777889999988776321 22489999888887
Q ss_pred HHHHHHHH
Q psy12877 305 IVIHLCHA 312 (814)
Q Consensus 305 ~l~e~v~q 312 (814)
.+.+++.+
T Consensus 283 ~L~~~~~~ 290 (317)
T 1hnj_A 283 ALDEAVRD 290 (317)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 77666543
No 77
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.55 E-value=2.3e-14 Score=175.22 Aligned_cols=190 Identities=16% Similarity=0.148 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcce----EEEEecccCCC------------------CChHHHHHHHHcCCCCCccEEE
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQE----VYMGNVCQAGL------------------GQAPCRQAVIFAGLPKSTVCTT 459 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~----vivG~~~~~~~------------------~~~~a~~~a~~~Gl~~~~~~~t 459 (814)
..+|+.+++.+||+|||+++++||. |++|+...... ....+..++..+|+. .|.++
T Consensus 95 ~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~t 172 (915)
T 2qo3_A 95 QQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLE--GPSIS 172 (915)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBC--SCEEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCC--CCEEE
Confidence 4679999999999999999999995 88887644321 113677899999995 59999
Q ss_pred eCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHHH
Q psy12877 460 VNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTA 539 (814)
Q Consensus 460 v~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~~ 539 (814)
++++|+|++.||+.|+++|++|++|++|++|+|.++.... +.+ .
T Consensus 173 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~------------------------------~~~------~ 216 (915)
T 2qo3_A 173 VDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGV------------------------------FVD------F 216 (915)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHH------------------------------HHH------H
T ss_pred ECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHH------------------------------HHH------H
Confidence 9999999999999999999999999999999998863110 000 0
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCcccc
Q psy12877 540 KKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTA 619 (814)
Q Consensus 540 ~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt~ 619 (814)
.+.|. ..|.+.. +| |+. .
T Consensus 217 ~~~~~------------------ls~~g~~-------------------------------------~~-Fd~------~ 234 (915)
T 2qo3_A 217 SRQRA------------------LAADGRS-------------------------------------KA-FGA------G 234 (915)
T ss_dssp HTTTC------------------BCSSCCC-------------------------------------CT-TBT------T
T ss_pred hhhcc------------------cCCCCCc-------------------------------------cc-ccC------C
Confidence 00000 0011111 11 221 1
Q ss_pred CCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCC-----CCchHHhHHHHHHHhcCC-CcceeEehhh
Q psy12877 620 GNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID-----FPIAPAFAIPTLLKNGGQ-LSQFWYDENT 691 (814)
Q Consensus 620 ~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~-----~~~g~~~A~~~~~~~~~~-~sq~~y~e~t 691 (814)
.|+..++|||++|||.+.+.|++.|.+++++|+|++...+.... .+.+...+++++|+++|+ .++|+|.|-.
T Consensus 235 adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~H 312 (915)
T 2qo3_A 235 ADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAH 312 (915)
T ss_dssp CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECC
T ss_pred CCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEec
Confidence 35677999999999999999999999999999999977643221 224567899999999999 6899999844
No 78
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=99.53 E-value=4.8e-15 Score=161.79 Aligned_cols=177 Identities=18% Similarity=0.222 Sum_probs=128.7
Q ss_pred ChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccc
Q psy12877 11 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIV 90 (814)
Q Consensus 11 ~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (814)
++.+.+++..+|++ .+|+++++++|+|++.||..|+++|++|.+|+|||+|+|.+|....
T Consensus 88 p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s~~~~------------------- 147 (331)
T 2x3e_A 88 PATAPRVAARLGLV-GALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFSHTLD------------------- 147 (331)
T ss_dssp SCSHHHHHHHTTCT-TSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGSC-------------------
T ss_pred ChHHHHHHHHhCCC-CCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeeccccCCC-------------------
Confidence 45789999999997 4899999999999999999999999999999999999999763100
Q ss_pred ccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCC
Q psy12877 91 YDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI 170 (814)
Q Consensus 91 ~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~ 170 (814)
+.+ +
T Consensus 148 ---~~d---------------------~---------------------------------------------------- 151 (331)
T 2x3e_A 148 ---PAD---------------------R---------------------------------------------------- 151 (331)
T ss_dssp ---TTC---------------------H----------------------------------------------------
T ss_pred ---ccc---------------------c----------------------------------------------------
Confidence 000 0
Q ss_pred CHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC----C----CC--------
Q psy12877 171 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT----E----PI-------- 234 (814)
Q Consensus 171 t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~----~----p~-------- 234 (814)
.++..++|||+|+||.+.+.|+ +. .|.+.....+ + |.
T Consensus 152 ---------------------~~~~~~GdGA~A~vL~~~~~a~--~~----~i~~~~~~~dg~~~~~~~~p~~~~~~p~~ 204 (331)
T 2x3e_A 152 ---------------------STRALFGDGAGAVVLRAGDAEE--EG----ALLAFDLGSDGHQFDLLMTPAVSRAERSS 204 (331)
T ss_dssp ---------------------HHHHHBCCEEEEEEEEEECTTS--TT----BEEEEEEEECGGGTTSEEEECCCHHHHHH
T ss_pred ---------------------ccceeeccccEEEEEEecCCCC--CC----ceEEEEEEEcCCCCCeEEecCCCCCCCCc
Confidence 0012367999999998765431 11 2333322111 0 00
Q ss_pred ----C-C---C--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCC
Q psy12877 235 ----D-F---P--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298 (814)
Q Consensus 235 ----~-~---~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~ 298 (814)
. + + .....+++++|+++|++++|||+|..|.+.+...-...+.||++++++..+ .-.+||..
T Consensus 205 ~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gnt~ 282 (331)
T 2x3e_A 205 GQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRILAAVADQLDLPVERVVSN--IAEVGNTV 282 (331)
T ss_dssp TCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCG
T ss_pred cCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHHhhh--HhhhCcHH
Confidence 0 0 0 123468999999999999999999999999988888889999988765432 23589998
Q ss_pred CChHHHHHHHHHHH
Q psy12877 299 GMSGARIVIHLCHA 312 (814)
Q Consensus 299 gasG~~~l~e~v~q 312 (814)
+++....+.+++.+
T Consensus 283 sAs~~~~L~~~~~~ 296 (331)
T 2x3e_A 283 AASIPLALAHGLRQ 296 (331)
T ss_dssp GGHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 88877766666543
No 79
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=99.52 E-value=2.2e-14 Score=157.05 Aligned_cols=179 Identities=15% Similarity=0.047 Sum_probs=129.3
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++.+.+++..+|++ .+|+++++++|+|++.||.+|+++|++|.+|+|||+|+|.+|....
T Consensus 96 ~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~~------------------ 156 (339)
T 1mzj_A 96 TPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTDVID------------------ 156 (339)
T ss_dssp SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGGGSC------------------
T ss_pred CChHHHHHHHHhCCC-CccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcccccccC------------------
Confidence 456899999999997 4899999999999999999999999999999999999999763100
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
++
T Consensus 157 ------------------------------------------------------------------------~~------ 158 (339)
T 1mzj_A 157 ------------------------------------------------------------------------LA------ 158 (339)
T ss_dssp ------------------------------------------------------------------------SS------
T ss_pred ------------------------------------------------------------------------cc------
Confidence 00
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccE-EEEEEEEecCC-------CCC------
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLA-RIIAYFDAATE-------PID------ 235 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a-~I~g~~~~~~~-------p~~------ 235 (814)
+ ..++..++|||+|+||.+.+. .+.++ .+.+.+...+. |..
T Consensus 159 -----------------d---~~~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~ 213 (339)
T 1mzj_A 159 -----------------D---RSLSFLFGDGAGAAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSV 213 (339)
T ss_dssp -----------------C---TTTTTTBCEEEEEEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSS
T ss_pred -----------------c---cccceEeccCceEEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCccccccc
Confidence 0 012334789999999986542 12222 12232221110 100
Q ss_pred ---C----C--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCC-CcccCCCCccccCCCC
Q psy12877 236 ---F----P--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS-KVNVHGGAVSLGHPIG 299 (814)
Q Consensus 236 ---~----~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~-~vN~~GG~la~Ghp~g 299 (814)
+ + .....+++++|+++|++++|||+|..|...+...-...+.||++.+ ++-.+ .-.+||..+
T Consensus 214 ~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~~~--~~~~Gn~~s 291 (339)
T 1mzj_A 214 GRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSRD--AEDTGNTSS 291 (339)
T ss_dssp CSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECCT--HHHHCBCTT
T ss_pred ccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCccceeeeh--hhhcCchHH
Confidence 0 0 1234689999999999999999999999998877778899999887 66321 234899998
Q ss_pred ChHHHHHHHHHHH
Q psy12877 300 MSGARIVIHLCHA 312 (814)
Q Consensus 300 asG~~~l~e~v~q 312 (814)
+++...+.+++.+
T Consensus 292 As~~~~L~~~~~~ 304 (339)
T 1mzj_A 292 ASVALALDRLVRS 304 (339)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 8887776666554
No 80
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=99.51 E-value=2e-14 Score=155.56 Aligned_cols=108 Identities=15% Similarity=0.090 Sum_probs=95.8
Q ss_pred ecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCc
Q psy12877 387 RTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCAS 466 (814)
Q Consensus 387 rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caS 466 (814)
+|++.++.....+.+..+|+.+|+++||+|+|+++++||.+++|+..+....+..+..++..+|++. .|.++++.+|+|
T Consensus 36 ~~gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~aCas 114 (313)
T 1zow_A 36 MTGIKERHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGK-VASMDQLAACSG 114 (313)
T ss_dssp HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCS-CCEEEEECGGGH
T ss_pred hhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-CcEEEECCcCHH
Confidence 5666665555567899999999999999999999999999999987665445667899999999974 799999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 467 GMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 467 g~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
++.||..|++.|++|.+|+||++|+|.++
T Consensus 115 ~~~al~~A~~~i~~g~~~~vLv~g~e~~s 143 (313)
T 1zow_A 115 FMYSMITAKQYVQSGDYHNILVVGADKLS 143 (313)
T ss_dssp HHHHHHHHHHHHHTTSCSCEEEEEEEEGG
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEcccc
Confidence 99999999999999999999999999986
No 81
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=99.51 E-value=1.4e-14 Score=160.79 Aligned_cols=187 Identities=16% Similarity=0.173 Sum_probs=132.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~-~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+.+++..+|++..+|+++++ ++|+|++.||.+|+++|++|.+|+|||+|+|.+|...+.
T Consensus 130 ~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~~~---------------- 193 (374)
T 2h84_A 130 IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSN---------------- 193 (374)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCGGGCCC----------------
T ss_pred CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchhhcC----------------
Confidence 467899999999998557999996 899999999999999999999999999999998742100
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
+.
T Consensus 194 -----~~------------------------------------------------------------------------- 195 (374)
T 2h84_A 194 -----TD------------------------------------------------------------------------- 195 (374)
T ss_dssp -----SS-------------------------------------------------------------------------
T ss_pred -----CC-------------------------------------------------------------------------
Confidence 00
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC-CC--------CCCC--
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT-EP--------IDFP-- 237 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~-~p--------~~~~-- 237 (814)
+.-+..++..++|||+|+||.+.+.++.. +..++.+.+.... +. ...+
T Consensus 196 ------------------dr~~~~~~~lfGDGA~A~vL~~~~~~~~~---~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~ 254 (374)
T 2h84_A 196 ------------------GGDQMVASSIFADGSAAYIIGCNPRIEET---PLYEVMCSINRSFPNTENAMVWDLEKEGWN 254 (374)
T ss_dssp ------------------SHHHHHHHHHBCCEEEEEEEESSCCTTCC---CCEEEEEEEEEECSSCTTSEEEEEETTEEE
T ss_pred ------------------CHHHHhhhhhhccCcEEEEEecCCCcccC---CceeEEeeeeEEeCCCcccceeEEecCcEE
Confidence 00000112236799999999876654321 2237777665311 00 0000
Q ss_pred ------------CcHHHHHHHHHHHcC------CCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCC
Q psy12877 238 ------------IAPAFAIPTLLKNGG------VAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIG 299 (814)
Q Consensus 238 ------------~~~~~a~~~al~~aG------l~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~g 299 (814)
.....+++++|+++| ++++|||+| +|.++....-...+.||++++++.++ ....+.+|
T Consensus 255 ~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~~~~~lgl~~~k~~~s---~~~~~~~G 330 (374)
T 2h84_A 255 LGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSILMNIENSLGIDPKQTKNT---WDVYHAYG 330 (374)
T ss_dssp EEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHHHHHHTTCCGGGGHHH---HHHHHHHC
T ss_pred EEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHHHHHHHHHcCCCHHHHHHH---HHHHHHhC
Confidence 122458889999999 999999999 99999988888889999999887532 12235555
Q ss_pred ChHHHHHHHHHHHHHc
Q psy12877 300 MSGARIVIHLCHALKS 315 (814)
Q Consensus 300 asG~~~l~e~v~qLr~ 315 (814)
++++..+.-++.++..
T Consensus 331 nt~sasi~~~L~~~~~ 346 (374)
T 2h84_A 331 NMSSASVIFVMDHARK 346 (374)
T ss_dssp BCTTHHHHHHHHHHHT
T ss_pred CchhhHHHHHHHHHHh
Confidence 6666666666666654
No 82
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=99.50 E-value=4e-14 Score=157.54 Aligned_cols=183 Identities=14% Similarity=0.046 Sum_probs=129.7
Q ss_pred CChHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+.+++..+|++..+|++++ +++|+|++.||..|+++|++|.+|.|||+|+|.+|....
T Consensus 119 ~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~s~~~~----------------- 181 (382)
T 1u0m_A 119 MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLCYQ----------------- 181 (382)
T ss_dssp SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGGGCC-----------------
T ss_pred CCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhcC-----------------
Confidence 45789999999999855899999 999999999999999999999999999999999764100
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
+.+. .+
T Consensus 182 -----~~d~-------------------~~-------------------------------------------------- 187 (382)
T 1u0m_A 182 -----PTDL-------------------GV-------------------------------------------------- 187 (382)
T ss_dssp -----TTCC-------------------SH--------------------------------------------------
T ss_pred -----cccC-------------------CH--------------------------------------------------
Confidence 0000 00
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEe--cCCCC------------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDA--ATEPI------------ 234 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~--~~~p~------------ 234 (814)
+ +..++..++|||+|+||.+.+. .+ .+|.++... .+...
T Consensus 188 ----~----------------~~~~~~lfGDGA~A~vL~~~~~---~g----~~i~~~~~~~~~~~~~~~~~~~~~~g~~ 240 (382)
T 1u0m_A 188 ----G----------------SLLCNGLFGDGIAAAVVRGRGG---TG----VRLERNGSYLIPKTEDWIMYDVKATGFH 240 (382)
T ss_dssp ----H----------------HHHHHHHBCEEEEEEEEETTTC---SE----EEEEEEEEEECSSCTTTEEEEEETTEEE
T ss_pred ----H----------------HhhccchhcCCcEEEEEeccCC---CC----cEEEEeeeEecCChHHhcCceecCCceE
Confidence 0 0001223679999999986542 11 367665542 11100
Q ss_pred ------CC---CCcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCC-ccccCCCCChHHH
Q psy12877 235 ------DF---PIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGA-VSLGHPIGMSGAR 304 (814)
Q Consensus 235 ------~~---~~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~-la~Ghp~gasG~~ 304 (814)
.+ ..... +++++|+++|++++|||+|.+|.+++...-...+.||+++++++++.-. --+||..+++...
T Consensus 241 ~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~ 319 (382)
T 1u0m_A 241 FLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLD 319 (382)
T ss_dssp EEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHH
T ss_pred EEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHH
Confidence 01 11224 8999999999999999999999999988888899999999887643111 2367776666555
Q ss_pred HHHHHHH
Q psy12877 305 IVIHLCH 311 (814)
Q Consensus 305 ~l~e~v~ 311 (814)
.+.+++.
T Consensus 320 ~L~~~~~ 326 (382)
T 1u0m_A 320 ALRRLFD 326 (382)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 83
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.50 E-value=8.5e-14 Score=170.97 Aligned_cols=185 Identities=16% Similarity=0.204 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC-------------------CCChHHHHHHHHcCCCCCccEE
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG-------------------LGQAPCRQAVIFAGLPKSTVCT 458 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~-------------------~~~~~a~~~a~~~Gl~~~~~~~ 458 (814)
...|+.+++.+||+|||++++++| ++++|...... .....+..++..+|+. .|.+
T Consensus 80 ~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--GPs~ 157 (965)
T 3hhd_A 80 QLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR--GPSI 157 (965)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC--SCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCC--CCee
Confidence 345999999999999999999999 78888653321 1234688899999995 5999
Q ss_pred EeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHH
Q psy12877 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENT 538 (814)
Q Consensus 459 tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~ 538 (814)
+|+++|+|++.||+.|+++|++|++|++|+||+|.++.... .+
T Consensus 158 tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~------------------------------~~------- 200 (965)
T 3hhd_A 158 ALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNT------------------------------SV------- 200 (965)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHH------------------------------HH-------
T ss_pred eecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH------------------------------HH-------
Confidence 99999999999999999999999999999999999863210 00
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCccc
Q psy12877 539 AKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVT 618 (814)
Q Consensus 539 ~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt 618 (814)
.+.+.....|.+..+ | |+.
T Consensus 201 -----------------~~~~~~~ls~~g~~~----~----------------------------------Fd~------ 219 (965)
T 3hhd_A 201 -----------------QFLRLGMLSPEGTCK----A----------------------------------FDT------ 219 (965)
T ss_dssp -----------------HHHHHTCBCTTCCCC----T----------------------------------TBT------
T ss_pred -----------------HHHhccCcCCCCccc----c----------------------------------chh------
Confidence 000000001222111 0 110
Q ss_pred cCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCC------chHHhHHHHHHHhcCC-CcceeEehh
Q psy12877 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP------IAPAFAIPTLLKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 619 ~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~------~g~~~A~~~~~~~~~~-~sq~~y~e~ 690 (814)
..|.-..+||+++|||.+.+.|+ +++++|+|++...+.....+ .+...+++++|+++|+ .+|++|.|-
T Consensus 220 ~adG~~~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEa 294 (965)
T 3hhd_A 220 AGNGYCRSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEA 294 (965)
T ss_dssp TCCSBCBBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred ccCCccccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccc
Confidence 01122369999999999999886 58899999998776543222 3466799999999999 689999984
No 84
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=99.48 E-value=1.4e-13 Score=150.32 Aligned_cols=165 Identities=16% Similarity=0.176 Sum_probs=120.5
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++.+++++..+|++..+|+++++.+|+|++.||..|+++|++|.++.|||+|+|.+|..-.
T Consensus 101 ~p~~a~~v~~~lgl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------------ 162 (333)
T 4dfe_A 101 FPSTACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRILD------------------ 162 (333)
T ss_dssp BSCHHHHHHHHTTCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCC------------------
T ss_pred CCcHHHHHHHHhCCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeeccccccC------------------
Confidence 46789999999999778999999999999999999999999999999999999999875210
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+ +
T Consensus 163 ---------------------------------------------------~---------------------~------ 164 (333)
T 4dfe_A 163 ---------------------------------------------------F---------------------K------ 164 (333)
T ss_dssp ---------------------------------------------------T---------------------T------
T ss_pred ---------------------------------------------------c---------------------c------
Confidence 0 0
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecC--------CC--------
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAAT--------EP-------- 233 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~--------~p-------- 233 (814)
+ ..++..++|||+|+||...+. + .|.++....+ .|
T Consensus 165 -----------------d---~~~~~lfGDGA~A~vl~~~~~-------~--~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 215 (333)
T 4dfe_A 165 -----------------D---RTTCVLFGDGAGAVILQASDE-------P--GVLASALHADGSHSNILCTPGNVNGGVV 215 (333)
T ss_dssp -----------------C---TTTTTTBCEEEEEEEEEEESS-------C--SEEEEEEEECGGGGGGEEBCEEEETTEE
T ss_pred -----------------c---ccceeeeccccEEEEEEEcCC-------C--CeEEEEEEEccCCcCeEEECCCCCCccc
Confidence 0 013455789999999986441 1 1222222111 00
Q ss_pred ---CCCC-----------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCC
Q psy12877 234 ---IDFP-----------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIG 299 (814)
Q Consensus 234 ---~~~~-----------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~g 299 (814)
..+. .....+++++|+++|++++|||+|.+|.+.....-...+.||++++++..+ .--+||..+
T Consensus 216 ~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~--l~~~GNt~s 293 (333)
T 4dfe_A 216 SGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRIMQSTCRKLGLPQERMIVT--VGEHGNTSA 293 (333)
T ss_dssp EECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGG
T ss_pred ccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh--HHhcCchHH
Confidence 0000 112357889999999999999999999999998888899999999876542 112566443
Q ss_pred Ch
Q psy12877 300 MS 301 (814)
Q Consensus 300 as 301 (814)
++
T Consensus 294 as 295 (333)
T 4dfe_A 294 AS 295 (333)
T ss_dssp GH
T ss_pred HH
Confidence 33
No 85
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=99.47 E-value=1.3e-14 Score=162.21 Aligned_cols=188 Identities=17% Similarity=0.155 Sum_probs=130.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+++++..+|++..+|++++ +++|+|++.||..|.++|++|.+|+|||+|+|.+|....
T Consensus 148 ~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~~----------------- 210 (393)
T 1ted_A 148 APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAV----------------- 210 (393)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGCC-----------------
T ss_pred cChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccCC-----------------
Confidence 46789999999999866788998 999999999999999999999999999999999875210
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
|+..|+
T Consensus 211 -------------------------~~~~r~------------------------------------------------- 216 (393)
T 1ted_A 211 -------------------------FADDIN------------------------------------------------- 216 (393)
T ss_dssp -------------------------CCSSHH-------------------------------------------------
T ss_pred -------------------------CCCCHH-------------------------------------------------
Confidence 000000
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEe--cCCCCC-----------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDA--ATEPID----------- 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~--~~~p~~----------- 235 (814)
+...+..++|||+|+||.+.+.+...+ ..+++|.+++.. .+....
T Consensus 217 ---------------------~~~~~~lfGDGA~A~vL~~~~~~~~~~-~~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~ 274 (393)
T 1ted_A 217 ---------------------DVVIHSLFGDGCAALVIGASQVQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGIT 274 (393)
T ss_dssp ---------------------HHHHHHHBCEEEEEEEEEEECTTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEE
T ss_pred ---------------------HhhhhhhhcCccEEEEEecCCCccccC-cceeeeeccceEEcCCchhhccceecCCCeE
Confidence 001122367999999998765431112 234578887654 221110
Q ss_pred --CC--------CcHHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCC-CccccCCCCChHHH
Q psy12877 236 --FP--------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGG-AVSLGHPIGMSGAR 304 (814)
Q Consensus 236 --~~--------~~~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG-~la~Ghp~gasG~~ 304 (814)
.+ .....+++++|+++|++++|||+|.+|.++....-...+.||++++++.++-- .--+|| +++.
T Consensus 275 ~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GN----t~sA 350 (393)
T 1ted_A 275 CELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGN----MLSV 350 (393)
T ss_dssp EEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCB----CTHH
T ss_pred EecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHHHhhCC----chHh
Confidence 01 11245789999999999999999999999999888888999999987743110 112555 4444
Q ss_pred HHHHHHHHHH
Q psy12877 305 IVIHLCHALK 314 (814)
Q Consensus 305 ~l~e~v~qLr 314 (814)
.+.-++.++.
T Consensus 351 si~~~L~~~~ 360 (393)
T 1ted_A 351 SLIFVLETMV 360 (393)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444555544
No 86
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=99.43 E-value=2.2e-13 Score=148.79 Aligned_cols=108 Identities=18% Similarity=0.117 Sum_probs=93.7
Q ss_pred ecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCc
Q psy12877 387 RTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCAS 466 (814)
Q Consensus 387 rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caS 466 (814)
+|.+.++.....+.+..+|+.+|+++||+|+|+++++||.+++|+..+....+..+..++..+|++ ..+.++++.+|+|
T Consensus 46 ~~gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aC~s 124 (335)
T 1u6e_A 46 RTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAK-GILGFDLSAGAAG 124 (335)
T ss_dssp HHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCT-TSEEEEEECGGGH
T ss_pred hcCCceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEeeeccccHH
Confidence 444544443444678999999999999999999999999999998765544567889999999996 5799999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 467 GMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 467 g~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
++.||..|+++|++|.+|+||++|+|.++
T Consensus 125 ~~~al~~A~~~i~~g~~~~vLv~g~e~~s 153 (335)
T 1u6e_A 125 FGYALGAAADMIRGGGAATMLVVGTEKLS 153 (335)
T ss_dssp HHHHHHHHHHHHHHTSCSSEEEEEEEECG
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEcccc
Confidence 99999999999999999999999999875
No 87
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=99.42 E-value=1.4e-12 Score=141.55 Aligned_cols=59 Identities=14% Similarity=0.128 Sum_probs=55.5
Q ss_pred CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 9 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 9 ~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
..++.+++++..+|++ .+|+++++.+|+|++.||..|.++|++|.++.|||+|+|.+|.
T Consensus 93 ~~p~~a~~v~~~lGl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 151 (323)
T 3il3_A 93 AYPSAACQVQGLLNID-DAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSR 151 (323)
T ss_dssp SSSCHHHHHHHHTTCS-SCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred CCccHHHHHHHHhCCC-CccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeecccc
Confidence 3467899999999997 7999999999999999999999999999999999999999875
No 88
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=99.42 E-value=3e-13 Score=145.95 Aligned_cols=95 Identities=13% Similarity=0.157 Sum_probs=87.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
.+..+|+.+|+++||+|+|+++++||.+++|+..+....+..+..++..+|++. .|.++++++|+|++.||..|+++|+
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~~C~s~~~al~~A~~~i~ 126 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKG-VYAFDISAACSGFIYALDIADSFIK 126 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-ceEEecCccchHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999988665545668999999999974 6999999999999999999999999
Q ss_pred cCCCCeEEEEeeeccc
Q psy12877 480 LGHQDVMVAGGMESMS 495 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s 495 (814)
+|.+|+||++|+|.++
T Consensus 127 ~g~~~~vlv~g~e~~s 142 (309)
T 2ebd_A 127 SGKAKNVLVIGAEKLS 142 (309)
T ss_dssp TTSCSEEEEEEEEEGG
T ss_pred CCCCCEEEEEEecccc
Confidence 9999999999999875
No 89
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=99.41 E-value=3.5e-13 Score=146.35 Aligned_cols=95 Identities=17% Similarity=0.152 Sum_probs=86.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+|+|+++++||.+++|+..+....+..+..++..+|+ ..|.++++++|+|++.||..|+++|
T Consensus 47 ~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~~i 124 (322)
T 1ub7_A 47 DEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHALV 124 (322)
T ss_dssp TCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999876544345688999999999 4799999999999999999999999
Q ss_pred HcCCCCeEEEEeeeccc
Q psy12877 479 SLGHQDVMVAGGMESMS 495 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s 495 (814)
++|.+|++|++|+|.++
T Consensus 125 ~~g~~~~vlv~g~e~~s 141 (322)
T 1ub7_A 125 EAGLAQKVLAVGAEALS 141 (322)
T ss_dssp HTTSCSEEEEEEEECGG
T ss_pred HcCCCCEEEEEEechhc
Confidence 99999999999999876
No 90
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=99.35 E-value=1.6e-12 Score=142.51 Aligned_cols=194 Identities=19% Similarity=0.114 Sum_probs=127.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCcccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 89 (814)
.++.+++++..+|++..+|+++++.+|+|++.||..|+++|++|.++.|||+|+|.+|....
T Consensus 104 ~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------------ 165 (345)
T 3s21_A 104 EPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYE------------------ 165 (345)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHH------------------
T ss_pred CChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhc------------------
Confidence 46789999999999877999999999999999999999999999999999999999875100
Q ss_pred cccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccC
Q psy12877 90 VYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169 (814)
Q Consensus 90 ~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~ 169 (814)
+ ...+ ++. |..
T Consensus 166 ----------------------------------~---~~~~--------~~~--------------------~~~---- 176 (345)
T 3s21_A 166 ----------------------------------K---TLER--------MTS--------------------PDV---- 176 (345)
T ss_dssp ----------------------------------H---HHHH--------HTC--------------------TTC----
T ss_pred ----------------------------------c---cccc--------ccC--------------------Ccc----
Confidence 0 0000 000 000
Q ss_pred CCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCC-CC--------CC-Cc
Q psy12877 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP-ID--------FP-IA 239 (814)
Q Consensus 170 ~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p-~~--------~~-~~ 239 (814)
+.+. +. ...++..++|||+|+||.+.+... + . ..|.+.....+.. .. +. .+
T Consensus 177 -~~~~------f~-------~~~~~~~~GdGA~A~vl~~~~~~~--~--~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~g 237 (345)
T 3s21_A 177 -TEEE------FR-------NELAALTLGCGAAAMVMARSELVP--D--A-PRYKGGVTRSATEWNKLCRGNLDRMVTDT 237 (345)
T ss_dssp -CHHH------HH-------HHHGGGGBCCEEEEEEEEEGGGST--T--S-CEEEEEEEEECGGGTTC-----------C
T ss_pred -chhh------hh-------hhccceeeccceeEEEEecCCCCC--C--C-cceeeeccccCcchhhhccccCcceEEcH
Confidence 0000 00 011233478999999998754311 1 1 2566555432200 00 10 11
Q ss_pred ----------HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCCccccCCCCChHHHHHHHH
Q psy12877 240 ----------PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHL 309 (814)
Q Consensus 240 ----------~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gasG~~~l~e~ 309 (814)
...+++++|+++|++++|||+|.+|.+.....-...+.||++++++..+ .--+||...++-...+.++
T Consensus 238 ~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~ 315 (345)
T 3s21_A 238 RLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPHTAAFVKSFGIDPAKVMTI--FGEHGNIGPASVPIVLSKL 315 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCcCHHHceee--HhhcCchHHHHHHHHHHHH
Confidence 1246788999999999999999999999988888889999999876421 1136676555544444443
Q ss_pred HH
Q psy12877 310 CH 311 (814)
Q Consensus 310 v~ 311 (814)
+.
T Consensus 316 ~~ 317 (345)
T 3s21_A 316 KE 317 (345)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 91
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=99.35 E-value=3e-12 Score=140.89 Aligned_cols=58 Identities=10% Similarity=0.060 Sum_probs=55.1
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.++.+++++..+|++ .+|+++++.+|+|++.||..|.++|++|.++.|||+|+|.+|.
T Consensus 110 ~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~ 167 (359)
T 3h78_A 110 DPSQACLIQPLLGLR-HIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSK 167 (359)
T ss_dssp BSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGG
T ss_pred CCcHHHHHHHHcCCC-CCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcc
Confidence 467899999999998 7999999999999999999999999999999999999999876
No 92
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.34 E-value=2.1e-12 Score=171.70 Aligned_cols=196 Identities=13% Similarity=0.126 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcc--------eEEEEecccCC------------------------CCChHHHHHH-HH
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQ--------EVYMGNVCQAG------------------------LGQAPCRQAV-IF 448 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID--------~vivG~~~~~~------------------------~~~~~a~~~a-~~ 448 (814)
...|+.+++.+||+|||+++++++ ++++|+..+.. .....+..++ .+
T Consensus 2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D 2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence 456999999999999999999885 58888754211 0112333444 45
Q ss_pred cCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCcccccccccccccccccc
Q psy12877 449 AGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNK 528 (814)
Q Consensus 449 ~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (814)
+|+ ..|+++++++|+||+.||+.|+++|++|++|++||||+|.|+..++. .+.
T Consensus 2727 lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~--------------------~f~----- 2779 (3089)
T 3zen_D 2727 VGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAII--------------------GFG----- 2779 (3089)
T ss_dssp TCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH--------------------HHH-----
T ss_pred cCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHH--------------------HHH-----
Confidence 688 46999999999999999999999999999999999999997632110 000
Q ss_pred ccHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccc
Q psy12877 529 IHMGNCA-ENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLA 607 (814)
Q Consensus 529 ~~mg~~A-e~~~~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~ 607 (814)
.|+.++ ..++..++. .|.+..+
T Consensus 2780 -~~~als~~~~~~~~~~-------------------sp~~~cr------------------------------------- 2802 (3089)
T 3zen_D 2780 -DMAATADTEMMRAKGI-------------------SDSKFSR------------------------------------- 2802 (3089)
T ss_dssp -HHTCBCCHHHHHHTTC-------------------CTTTSCC-------------------------------------
T ss_pred -HhhhhhcchhhhhccC-------------------CcccccC-------------------------------------
Confidence 000000 000111111 1111111
Q ss_pred cccccCCCccccCCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCCCCC-------------chHHhHHHH
Q psy12877 608 TVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP-------------IAPAFAIPT 674 (814)
Q Consensus 608 p~f~~~~~plt~~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~~~~-------------~g~~~A~~~ 674 (814)
| |+. ..|...++|||++|||++.+.|+++|.++++.|.|.+...+ +..++ .+...++++
T Consensus 2803 p-Fd~------~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~D-g~~~~~~aP~~g~~~a~~~~q~~ai~~ 2874 (3089)
T 3zen_D 2803 A-NDR------RRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFAD-GVHTSIPAPGLGALGAARGGRESTLAR 2874 (3089)
T ss_dssp S-SBT------TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECC-CCCCCSSCCCCGGGGGSTTGGGSHHHH
T ss_pred c-ccc------CCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecC-CcccCccCCchhHHhHhhhhHHHHHHH
Confidence 1 110 01223389999999999999999999999998877775433 22221 133458999
Q ss_pred HHHhcCC-CcceeEeh
Q psy12877 675 LLKNGGQ-LSQFWYDE 689 (814)
Q Consensus 675 ~~~~~~~-~sq~~y~e 689 (814)
+|+++|+ .+||+|.|
T Consensus 2875 AL~~AGl~p~DIdyVE 2890 (3089)
T 3zen_D 2875 SLAQLGVGADDIAVIS 2890 (3089)
T ss_dssp HHHTTTCCGGGEEEEE
T ss_pred HHHHcCCCHHHeeEEE
Confidence 9999999 68999998
No 93
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.34 E-value=2.6e-12 Score=160.13 Aligned_cols=197 Identities=11% Similarity=0.030 Sum_probs=136.6
Q ss_pred CChHHHHHHHHcCCCCC-cceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKS-TVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~-~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.+..+.+++..+|++.. .+++.++.+|+|++.||..|.++|++|.++.|||+|+|.++......
T Consensus 724 ~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~~~~--------------- 788 (979)
T 3tsy_A 724 MPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGP--------------- 788 (979)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTCCCC---------------
T ss_pred CCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchheeCC---------------
Confidence 46789999999999733 46899999999999999999999999999999999999865421100
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
.
T Consensus 789 -------------------------------------------------------------------------------~ 789 (979)
T 3tsy_A 789 -------------------------------------------------------------------------------S 789 (979)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCCC-----CCc----
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF-----PIA---- 239 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~~-----~~~---- 239 (814)
..+++. ..+|+.++|||+|+||++.+.+...+........+.+......... ..+
T Consensus 790 ~~~~~~----------------~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (979)
T 3tsy_A 790 EDALDS----------------LVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFH 853 (979)
T ss_dssp SSCHHH----------------HHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEE
T ss_pred ccCHHH----------------HhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEE
Confidence 001111 1223557899999999987765444433333333333322111110 011
Q ss_pred ------------HHHHHHHHHHHcCCCCCCccEEecCCCchHHHHHHhhhcCCCCCCcccCCCC-ccccCCCCChHHHHH
Q psy12877 240 ------------PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGA-VSLGHPIGMSGARIV 306 (814)
Q Consensus 240 ------------~~~a~~~al~~aGl~~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~GG~-la~Ghp~gasG~~~l 306 (814)
...+++++|+++|++++|||+|.+|.++....-...+.||++++++.++=-. --+||...+|=...+
T Consensus 854 ~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L 933 (979)
T 3tsy_A 854 LWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFIL 933 (979)
T ss_dssp ECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHH
T ss_pred EchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHH
Confidence 3568999999999999999999999999999999999999999986542110 125777666655566
Q ss_pred HHHHHHHHcC
Q psy12877 307 IHLCHALKSG 316 (814)
Q Consensus 307 ~e~v~qLr~g 316 (814)
.++..+++.|
T Consensus 934 ~~~~~~~~~G 943 (979)
T 3tsy_A 934 DEMRKKSLKG 943 (979)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHhhhccc
Confidence 6666655443
No 94
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=99.34 E-value=3.4e-12 Score=140.34 Aligned_cols=60 Identities=17% Similarity=0.139 Sum_probs=56.5
Q ss_pred CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 9 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 9 ~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
..++.+++++..+|++..+|+++++.+|+|++.||..|.++|++|.++.|||+|+|.+|.
T Consensus 101 ~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 160 (354)
T 4efi_A 101 RLPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISK 160 (354)
T ss_dssp SSSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred CCCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcc
Confidence 357899999999999768999999999999999999999999999999999999999875
No 95
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=99.33 E-value=9.3e-12 Score=137.42 Aligned_cols=60 Identities=15% Similarity=0.141 Sum_probs=56.6
Q ss_pred CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 9 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 9 ~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
..++.+++++..+|++..+|+++++.+|+|++.||..|.++|++|.++.|||+|+|++|.
T Consensus 115 ~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~ 174 (365)
T 3gwa_A 115 VLPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSK 174 (365)
T ss_dssp SBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred CCCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhc
Confidence 346789999999999878999999999999999999999999999999999999999886
No 96
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.33 E-value=2.1e-13 Score=167.14 Aligned_cols=93 Identities=14% Similarity=0.171 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHcCCC-CcC----cc----eEEEEecccCCC------------------------CChHHHHHHH-H
Q psy12877 403 TKLGAVAIESAIQKANMD-KSD----VQ----EVYMGNVCQAGL------------------------GQAPCRQAVI-F 448 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~-~~d----ID----~vivG~~~~~~~------------------------~~~~a~~~a~-~ 448 (814)
..|+.+++.+||+|||++ |.+ |+ ++++|+..+... ....+..++. .
T Consensus 1013 qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~ 1092 (1688)
T 2pff_A 1013 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1092 (1688)
T ss_dssp TTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHH
Confidence 458999999999999998 665 34 455554433210 0123445555 5
Q ss_pred cCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccC
Q psy12877 449 AGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 497 (814)
Q Consensus 449 ~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~ 497 (814)
+|+ ..|.++++++|+||+.||+.|++.|++|++|++||||+|.++..
T Consensus 1093 LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~ 1139 (1688)
T 2pff_A 1093 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEE 1139 (1688)
T ss_dssp CCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTT
T ss_pred cCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHH
Confidence 787 46999999999999999999999999999999999999998643
No 97
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=99.32 E-value=1.6e-12 Score=145.12 Aligned_cols=96 Identities=16% Similarity=0.046 Sum_probs=86.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe-CCCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv-~~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+.+++ +.+|+||..||..|+++|
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i 189 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYV 189 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998766 3355688999999999865678888 999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+|+||++|+|.++.
T Consensus 190 ~~G~~~~vLv~g~e~~s~ 207 (393)
T 1ted_A 190 RAHPAMKALVVCIELCSV 207 (393)
T ss_dssp HHSTTCEEEEEEEEECGG
T ss_pred HcCCCCEEEEEEEEeccc
Confidence 999999999999999873
No 98
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.32 E-value=2.3e-12 Score=163.50 Aligned_cols=91 Identities=14% Similarity=0.193 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHcCCC-CcC----cc----eEEEEecccCC------------------------CCChHHHHHHH-H
Q psy12877 403 TKLGAVAIESAIQKANMD-KSD----VQ----EVYMGNVCQAG------------------------LGQAPCRQAVI-F 448 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~-~~d----ID----~vivG~~~~~~------------------------~~~~~a~~~a~-~ 448 (814)
..|+.+++.+||+|||++ |.+ |+ ++++|+..+.. .....+..++. .
T Consensus 1212 ~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~ 1291 (1887)
T 2uv8_A 1212 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1291 (1887)
T ss_dssp HHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHH
Confidence 458889999999999994 766 44 46666543320 01224455666 4
Q ss_pred cCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 449 AGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 449 ~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
+|+ ..|.++++++|+||+.||+.|++.|++|++|++||||+|.|+
T Consensus 1292 lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~ 1336 (1887)
T 2uv8_A 1292 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQ 1336 (1887)
T ss_dssp TCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred cCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCC
Confidence 788 469999999999999999999999999999999999999875
No 99
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=99.28 E-value=9.2e-12 Score=135.85 Aligned_cols=111 Identities=16% Similarity=0.177 Sum_probs=98.8
Q ss_pred eecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCC
Q psy12877 386 SRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCA 465 (814)
Q Consensus 386 ~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~ca 465 (814)
.||++.++.....+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++...++++++.+|+
T Consensus 49 ~rtgi~~r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~ 128 (333)
T 4dfe_A 49 ARTGIHARYFAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCS 128 (333)
T ss_dssp HHHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEECGGG
T ss_pred HhcCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeCcccH
Confidence 35666655555567899999999999999999999999999999988765556678999999999976789999999999
Q ss_pred cHHHHHHHHHHHHHcCCCCeEEEEeeecccc
Q psy12877 466 SGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 466 Sg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~ 496 (814)
|++.||..|++.|++|.++.||++|+|.++.
T Consensus 129 s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 159 (333)
T 4dfe_A 129 GFAYAVATADSFIRSGQHRTALVIGAETFSR 159 (333)
T ss_dssp HHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEeecccc
Confidence 9999999999999999999999999999874
No 100
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.28 E-value=1.5e-11 Score=155.74 Aligned_cols=91 Identities=14% Similarity=0.226 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHcCCC-CcC----cc----eEEEEecccCC------------------------CCChHHHHHHH-H
Q psy12877 403 TKLGAVAIESAIQKANMD-KSD----VQ----EVYMGNVCQAG------------------------LGQAPCRQAVI-F 448 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~-~~d----ID----~vivG~~~~~~------------------------~~~~~a~~~a~-~ 448 (814)
..|+.+++.+||++|||+ |.+ |+ ++++|+..+.. .....+..++. .
T Consensus 1187 ~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A 1187 TLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp HHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHh
Confidence 447888999999999998 766 34 57777654420 00123455666 4
Q ss_pred cCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccc
Q psy12877 449 AGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495 (814)
Q Consensus 449 ~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s 495 (814)
+|+ ..|.++++++|+||+.||+.|++.|++|++|++||||+|.++
T Consensus 1267 lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~ 1311 (1878)
T 2uv9_A 1267 LSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQ 1311 (1878)
T ss_dssp CCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCC
T ss_pred cCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCC
Confidence 788 469999999999999999999999999999999999999875
No 101
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=99.26 E-value=2.8e-11 Score=134.61 Aligned_cols=58 Identities=19% Similarity=0.125 Sum_probs=53.9
Q ss_pred CCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 9 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 9 ~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
..++.+.+++..+|+ ..|+++++.+|+|++.||..|.++|++|.++.|||+|+|.+|.
T Consensus 152 ~~p~~a~~v~~~LGl--~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~ 209 (392)
T 3led_A 152 AYPAMAIEVQNALGL--GGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICSG 209 (392)
T ss_dssp SBSCHHHHHHHHTTC--CSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred CccHHHHHHHHHhCC--CCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCC
Confidence 346789999999999 4899999999999999999999999999999999999999875
No 102
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=99.26 E-value=4.8e-11 Score=133.66 Aligned_cols=189 Identities=14% Similarity=0.097 Sum_probs=132.2
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+++++..+|++..+| +++++.+|+|++.||..|.++|++|.+++|||+|+|.+|..-. .
T Consensus 150 ~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~E~~s~~~~--~-------------- 213 (406)
T 2d3m_A 150 MPSADFQCAKLLGLHANVNKYCIYMQGAYAGGTVMRYAKDLAENNRGARVLVVCAELTIMMLR--A-------------- 213 (406)
T ss_dssp ESCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHTSTTCEEEEEEEECGGGTCC--C--------------
T ss_pred CCCHHHHHHHHcCcCCCcceeeeEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchhee--C--------------
Confidence 4578999999999986577 9999999999999999999999999999999999999875110 0
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
+.+ .
T Consensus 214 -----~~d--------------------------------------------------------------------~--- 217 (406)
T 2d3m_A 214 -----PNE--------------------------------------------------------------------T--- 217 (406)
T ss_dssp -----CCS--------------------------------------------------------------------T---
T ss_pred -----Ccc--------------------------------------------------------------------c---
Confidence 000 0
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcC-CCccEEEEEEEEecCCCCC------------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN-AKPLARIIAYFDAATEPID------------ 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g-~~p~a~I~g~~~~~~~p~~------------ 235 (814)
.+-....+..++|||+|+||.+.+.. + ..+..++.+.+.... |..
T Consensus 218 ------------------~~~~~~~~~lfGDGAaA~vL~~~~~~---~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g 275 (406)
T 2d3m_A 218 ------------------HLDNAIGISLFGDGAAALIIGSDPII---GVEKPMFEIVCTKQTVI-PNTEDVIHLHLRETG 275 (406)
T ss_dssp ------------------THHHHHHHTTBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEEC-TTCTTTEEEEEETTE
T ss_pred ------------------chhhhhccceeccceEEEEEecCCCC---ccCCCceEEEecccEEc-CCCchhcceeeccCc
Confidence 00000123347899999999865421 2 223347777765321 110
Q ss_pred ----CC--------CcHHHHHHHHHHHcCCCCCCccE----EecCCCchHHHHHHhhhcCCCCCCcccC-CCCccccCCC
Q psy12877 236 ----FP--------IAPAFAIPTLLKNGGVAKQDVAL----WEINEAFSVVVLANIKKLDIDPSKVNVH-GGAVSLGHPI 298 (814)
Q Consensus 236 ----~~--------~~~~~a~~~al~~aGl~~~DID~----~e~~d~fa~~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~ 298 (814)
++ .....+++++|+++|++++ ||+ |-+|.+.....-...+.||++++++..+ --.--+||..
T Consensus 276 ~~~~~~~~v~~~~~~~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~ 354 (406)
T 2d3m_A 276 MMFYLSKGSPMTISNNVEACLIDVFKSVGITPP-EDWNSLFWIPHPGGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMV 354 (406)
T ss_dssp EEEEECTTHHHHHHHHHHHHHHHHHHTTTCCCC-SSGGGSEEEECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCG
T ss_pred eEEEeCchHHHHHHHHHHHHHHHHHHhcCCCCC-CCccceEEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCch
Confidence 00 0123588899999999999 999 9999999888778889999998865431 0012378877
Q ss_pred CChHHHHHHHHHHHH
Q psy12877 299 GMSGARIVIHLCHAL 313 (814)
Q Consensus 299 gasG~~~l~e~v~qL 313 (814)
+++-...+.+++.+=
T Consensus 355 sAsi~~~L~~~~~~g 369 (406)
T 2d3m_A 355 SASVGYILDEMRRKS 369 (406)
T ss_dssp GGHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhc
Confidence 777666666665543
No 103
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=99.26 E-value=1.1e-11 Score=136.28 Aligned_cols=58 Identities=17% Similarity=0.071 Sum_probs=54.4
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcC--EEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQD--VMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d--~vLa~G~e~~s~ 68 (814)
..+++++++..+|++ .+|+++++.+|+|++.||..|.++|++|.++ .|||+|+|.+|.
T Consensus 91 ~~~~a~~v~~~lG~~-~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~ 150 (357)
T 3s3l_A 91 LWPAASYVAHEAVGR-HVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAG 150 (357)
T ss_dssp SSCHHHHHHHHHTCS-SSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCT
T ss_pred cccHHHHHHHHhCCC-CCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccc
Confidence 347899999999997 8999999999999999999999999999999 999999999884
No 104
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=99.23 E-value=2.9e-11 Score=134.96 Aligned_cols=56 Identities=18% Similarity=0.272 Sum_probs=53.2
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeecc
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 65 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~ 65 (814)
.++.+.+++..+|++..+|+++++++|+||+.||..|.++|++|.++.|||+|+|.
T Consensus 85 ~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~ 140 (396)
T 1xpm_A 85 AKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT 140 (396)
T ss_dssp SSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE
T ss_pred CCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh
Confidence 46799999999999866999999999999999999999999999999999999996
No 105
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=99.23 E-value=3.4e-11 Score=130.69 Aligned_cols=108 Identities=14% Similarity=0.182 Sum_probs=94.5
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcH
Q psy12877 388 TPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASG 467 (814)
Q Consensus 388 Tp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg 467 (814)
|.+.++.-...+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++ ..++++++.+|+||
T Consensus 44 tGi~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~~C~s~ 122 (323)
T 3il3_A 44 SGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID-DAISFDLAAACTGF 122 (323)
T ss_dssp TCCCEEECCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS-SCEEEEECCGGGHH
T ss_pred cCCcEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC-CccEEEECCccHHH
Confidence 44443333334689999999999999999999999999999998876555667899999999997 68999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEeeecccc
Q psy12877 468 MKAIMLASQTLSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 468 ~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~ 496 (814)
+.||..|++.|++|.+++||++|+|.+|.
T Consensus 123 ~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 151 (323)
T 3il3_A 123 VYALSVADQFIRAGKVKKALVIGSDLNSR 151 (323)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEeecccc
Confidence 99999999999999999999999999974
No 106
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=99.22 E-value=4.7e-11 Score=131.22 Aligned_cols=99 Identities=15% Similarity=0.092 Sum_probs=91.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHH
Q psy12877 398 VSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQT 477 (814)
Q Consensus 398 ~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~ 477 (814)
.+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++...++++++.+|+||..||..|++.
T Consensus 62 ~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~ 141 (354)
T 4efi_A 62 AQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMNL 141 (354)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999988765556778999999999976789999999999999999999999
Q ss_pred HHcCCCCeEEEEeeecccc
Q psy12877 478 LSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 478 I~sG~~dvvLa~G~Es~s~ 496 (814)
|++|.++.||++|+|.+|.
T Consensus 142 i~~g~~~~vLvvg~e~~s~ 160 (354)
T 4efi_A 142 IQTGAAKRVLLAVGDTISK 160 (354)
T ss_dssp HHTTSCSEEEEEEEECGGG
T ss_pred HHCCCCCEEEEEEechhcc
Confidence 9999999999999999975
No 107
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=99.19 E-value=6.2e-11 Score=130.80 Aligned_cols=98 Identities=14% Similarity=0.112 Sum_probs=91.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++...++++++.+|+||+.||..|++.|
T Consensus 77 ~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i 156 (365)
T 3gwa_A 77 RETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLV 156 (365)
T ss_dssp TCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999887655566788999999999867899999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+++||++|+|++|.
T Consensus 157 ~~g~~~~vLvvg~e~~s~ 174 (365)
T 3gwa_A 157 ETGAARCVLLLTADTYSK 174 (365)
T ss_dssp HTTSCSEEEEEEEECGGG
T ss_pred HcCCCCEEEEEEEchhhc
Confidence 999999999999999985
No 108
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.18 E-value=8.7e-11 Score=146.30 Aligned_cols=93 Identities=15% Similarity=0.067 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCC-ccEEEeCCCCCcHHHHHHHHHHHHHc
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKS-TVCTTVNKVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~-~~~~tv~~~caSg~~Ai~~Aa~~I~s 480 (814)
..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++.. .++++++.+|+||..||..|.++|++
T Consensus 689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~s 767 (979)
T 3tsy_A 689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSG-VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAEN 767 (979)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHh
Confidence 556999999999999999999999999998543 3356788999999999743 36899999999999999999999999
Q ss_pred CCCCeEEEEeeeccc
Q psy12877 481 GHQDVMVAGGMESMS 495 (814)
Q Consensus 481 G~~dvvLa~G~Es~s 495 (814)
|.+++|||+|+|.++
T Consensus 768 G~~~~vLvvg~e~~~ 782 (979)
T 3tsy_A 768 NAGARVLVVCSEITV 782 (979)
T ss_dssp STTCEEEEEEEECTT
T ss_pred CCCCEEEEEEEEecc
Confidence 999999999999865
No 109
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=99.17 E-value=5.7e-11 Score=130.18 Aligned_cols=98 Identities=15% Similarity=0.158 Sum_probs=90.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++...++++++.+|+|++.||..|+++|
T Consensus 65 ~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i 144 (345)
T 3s21_A 65 DVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAARML 144 (345)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999877655566789999999999867899999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+++||++|+|.++.
T Consensus 145 ~~g~~~~vLvvg~e~~s~ 162 (345)
T 3s21_A 145 ERGEIDYALVVDGETANL 162 (345)
T ss_dssp HHTSCSEEEEEEEECCHH
T ss_pred HCCCCCEEEEEEEcccch
Confidence 999999999999999873
No 110
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=99.16 E-value=6.5e-11 Score=130.27 Aligned_cols=109 Identities=13% Similarity=0.082 Sum_probs=94.3
Q ss_pred ecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCc
Q psy12877 387 RTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCAS 466 (814)
Q Consensus 387 rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caS 466 (814)
+|.+.++.-...+.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++ ..++++++.+|+|
T Consensus 59 ~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s 137 (359)
T 3h78_A 59 RTGVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR-HIPVLDIRAQASG 137 (359)
T ss_dssp HHCCCEEEECCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCC-SCCEEEEECGGGH
T ss_pred hcCceEEEEcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC-CCcEEEECCHhHH
Confidence 344443332334578899999999999999999999999999998876555567899999999997 6899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEeeecccc
Q psy12877 467 GMKAIMLASQTLSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 467 g~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~ 496 (814)
++.||..|++.|++|.+++||++|+|++|.
T Consensus 138 ~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~ 167 (359)
T 3h78_A 138 LLYGLQMARGQILAGLARHVLVVCGEVLSK 167 (359)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEECGG
T ss_pred HHHHHHHHHHHHHCCCcCEEEEEEEchhcc
Confidence 999999999999999999999999999974
No 111
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.16 E-value=9.4e-11 Score=125.57 Aligned_cols=94 Identities=17% Similarity=0.247 Sum_probs=81.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++|++++|||.+++|+..+.. ..+..++..+|+ |++.++.+|+|+..+|..|+++|
T Consensus 52 e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~---~~A~~va~~Lgi----pafdV~~ACsg~~~AL~~Aa~~I 124 (347)
T 3lma_A 52 EMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQN---VTANYVARHLKI----PFLCLFGACSTSMESIAISSALI 124 (347)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSS---TTHHHHHHHHCC----CEEEBCCSTTHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCch---hHHHHHHHHhCC----CEEEecChhHHHHHHHHHHHHHH
Confidence 34667899999999999999999999999999876522 245556666665 58999999999999999999999
Q ss_pred HcCCCCeEEEEeeeccccCcc
Q psy12877 479 SLGHQDVMVAGGMESMSNVPF 499 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~~p~ 499 (814)
++|.+|.||++|+|++|+.+.
T Consensus 125 ~sG~~~~VLVVGaE~~S~aer 145 (347)
T 3lma_A 125 DGGFAKRALAATSSHNATAER 145 (347)
T ss_dssp HTTSCSEEEEEEEECGGGTTC
T ss_pred hcCCCCEEEEEEeccccchhh
Confidence 999999999999999997653
No 112
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=99.14 E-value=1e-10 Score=126.51 Aligned_cols=96 Identities=17% Similarity=0.198 Sum_probs=88.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+|+|+++++||.+++|+..+....+..+..++..+|++. .|.++++++|+|++.||..|+++|
T Consensus 48 ~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~aCas~~~al~~A~~~i 126 (317)
T 1hnj_A 48 NETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG-CPAFDVAAACAGFTYALSVADQYV 126 (317)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCS-SCEEEECCGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-CeEEeeCcccHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999987665545678999999999974 799999999999999999999999
Q ss_pred HcCCCCeEEEEeeeccc
Q psy12877 479 SLGHQDVMVAGGMESMS 495 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s 495 (814)
++|.+|+||++|+|.++
T Consensus 127 ~~g~~~~vlv~g~e~~s 143 (317)
T 1hnj_A 127 KSGAVKYALVVGSDVLA 143 (317)
T ss_dssp HTTSCSEEEEEEEECHH
T ss_pred HCCCCCEEEEEEechhc
Confidence 99999999999999876
No 113
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=99.12 E-value=1.8e-10 Score=124.96 Aligned_cols=94 Identities=14% Similarity=0.142 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHcC
Q psy12877 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLG 481 (814)
Q Consensus 402 ~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~sG 481 (814)
..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|+++ .++++++.+|+|+..||..|++.|++|
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~-~~~~~v~~aC~s~~~al~~A~~~i~~g 130 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATE-AFAFDISAACSGFVYALSMAEKLVLSG 130 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTT-CEEEEECCGGGHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCC-ceEEEeCcccHHHHHHHHHHHHHHHCC
Confidence 8999999999999999999999999999988766556778999999999985 899999999999999999999999999
Q ss_pred CCCeEEEEeeecccc
Q psy12877 482 HQDVMVAGGMESMSN 496 (814)
Q Consensus 482 ~~dvvLa~G~Es~s~ 496 (814)
.++.||++|+|.+|.
T Consensus 131 ~~~~vLvvg~e~~s~ 145 (321)
T 3il6_A 131 RYQTGLVIGGETFSK 145 (321)
T ss_dssp SCCCEEEEEEECGGG
T ss_pred CCCEEEEEEEccccc
Confidence 999999999999974
No 114
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=99.12 E-value=1.4e-10 Score=126.72 Aligned_cols=96 Identities=15% Similarity=0.167 Sum_probs=88.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+|+|+++++||.+++|+..+....+..+..++..+|++. .|.++++.+|+|++.||..|+++|
T Consensus 57 ~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~-~~~~~v~~aCas~~~Al~~A~~~i 135 (339)
T 1mzj_A 57 DETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADN-AGGFDLSAACAGFCHALSIAADAV 135 (339)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCC-ccEEEccccchHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999987665545568899999999974 799999999999999999999999
Q ss_pred HcCCCCeEEEEeeeccc
Q psy12877 479 SLGHQDVMVAGGMESMS 495 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s 495 (814)
++|.+|+||++|+|.++
T Consensus 136 ~~G~~~~vLv~g~e~~s 152 (339)
T 1mzj_A 136 ESGGSRHVLVVATERMT 152 (339)
T ss_dssp HHSSCSCEEEEEEEEGG
T ss_pred HCCCCCEEEEEEEcccc
Confidence 99999999999999986
No 115
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=99.12 E-value=8.6e-10 Score=123.07 Aligned_cols=59 Identities=15% Similarity=0.118 Sum_probs=55.9
Q ss_pred CChHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.++.+++++..+|++..++.+.+ +.+|++++.||..|.++|++|.++.|||+|+|.+|.
T Consensus 172 ~P~~a~~v~~~LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~ 231 (413)
T 3v7i_A 172 LPGLDVALANRLPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALST 231 (413)
T ss_dssp SSCHHHHHHHHTTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGG
T ss_pred cCHHHHHHHHHhCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccc
Confidence 57899999999999977899999 999999999999999999999999999999999986
No 116
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=99.09 E-value=7.8e-10 Score=119.86 Aligned_cols=62 Identities=15% Similarity=0.081 Sum_probs=56.5
Q ss_pred cCCCCChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 6 QAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 6 ~~~~~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
+....++.+++++..+|++ .+|+++++.+|+|++.||..|.++|++|.++.|||+|+|.+|.
T Consensus 84 ~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 145 (321)
T 3il6_A 84 PDFNMPSVACQVQGAIGAT-EAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSK 145 (321)
T ss_dssp CSCSSSCHHHHHHHHTTCT-TCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGG
T ss_pred CCcCCCcHHHHHHHHcCCC-CceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccc
Confidence 3334577999999999998 4999999999999999999999999999999999999999875
No 117
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=99.06 E-value=1e-09 Score=122.17 Aligned_cols=189 Identities=14% Similarity=0.096 Sum_probs=126.3
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+++++..+|++..+| +++++.+|+|++.||..|.++|++|.++.|||+|+|.+|..-. .
T Consensus 137 ~p~~a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al~~A~~~i~~g~~~~vLvvg~E~~s~~~~--~-------------- 200 (389)
T 1i88_A 137 MPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFR--G-------------- 200 (389)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECGGGTCC--C--------------
T ss_pred CchHHHHHHHHcCcCCCchhheeECCccHHHHHHHHHHHHHHHcCCCCEEEEEEEecccHhHc--C--------------
Confidence 4678999999999986676 9999999999999999999999999999999999999875210 0
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
+.+.
T Consensus 201 -----~~d~----------------------------------------------------------------------- 204 (389)
T 1i88_A 201 -----PSDT----------------------------------------------------------------------- 204 (389)
T ss_dssp -----CCTT-----------------------------------------------------------------------
T ss_pred -----cccc-----------------------------------------------------------------------
Confidence 0000
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcC-CCccEEEEEEEEecCCC--CC----------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN-AKPLARIIAYFDAATEP--ID---------- 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g-~~p~a~I~g~~~~~~~p--~~---------- 235 (814)
+.+ ....+..++|||+|+||.+.+. .+ ..+..++.+.+...... ..
T Consensus 205 --~~~----------------~~~~~~lfGDGA~A~vl~~~~~---~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~ 263 (389)
T 1i88_A 205 --HLD----------------SLVGQALFGDGAAALIVGSDPV---PEIEKPIFEMVWTAQTIAPDSEGAIDVHLREAGL 263 (389)
T ss_dssp --CHH----------------HHHHHHHBCCEEEEEEEESSCC---TTTSCCCEEEEEEEEEECTTCTTSEEEEEETTEE
T ss_pred --ccc----------------cccccceEecceEEEEEecCCC---CccCCCceEEEeeeeEEcCCCcccceeEEecCce
Confidence 000 0011223679999999986542 12 22223666655421100 00
Q ss_pred ---CCCc--------HHHHHHHHHHHcCCC-CCCccEEecCCCchHHHHHHhhhcCCCCCCcccC-CCCccccCCCCChH
Q psy12877 236 ---FPIA--------PAFAIPTLLKNGGVA-KQDVALWEINEAFSVVVLANIKKLDIDPSKVNVH-GGAVSLGHPIGMSG 302 (814)
Q Consensus 236 ---~~~~--------~~~a~~~al~~aGl~-~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gasG 302 (814)
++.. ...+++++|+++|++ .+|| +|-+|.+.....-...+.||++++++-.+ --.--+||..+++-
T Consensus 264 ~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~~~~l~~~GNtssAsi 342 (389)
T 1i88_A 264 TFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSI-FWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACV 342 (389)
T ss_dssp EEEECSCHHHHHHHHHHHHHHHHHGGGTCCCTTSS-EEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHH
T ss_pred EEEeccHHHHHHHHHHHHHHHHHHHhcCCCchhhc-eEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHH
Confidence 0101 134778999999998 8888 89999998887777889999998865321 00112677666665
Q ss_pred HHHHHHHHHH
Q psy12877 303 ARIVIHLCHA 312 (814)
Q Consensus 303 ~~~l~e~v~q 312 (814)
...+.+++.+
T Consensus 343 ~~~L~~~~~~ 352 (389)
T 1i88_A 343 LFILDEMRKK 352 (389)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5555555544
No 118
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=99.06 E-value=1.4e-09 Score=121.58 Aligned_cols=188 Identities=14% Similarity=0.098 Sum_probs=125.3
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+++++..+|++..+| +++++.+|+|++.||..|.++|++|.++.|||+|+|.+|..-. .
T Consensus 150 ~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~--~-------------- 213 (402)
T 3awk_A 150 MPGADFQLAKLLGLRPTVKRVMLYQQGAYAGATVLRVAKDLAENNKGARVLVACSEVTAVTFR--A-------------- 213 (402)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTCC--C--------------
T ss_pred CChHHHHHHHHcCCCCccceeeEECCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhhc--C--------------
Confidence 5678999999999986676 9999999999999999999999999999999999999876210 0
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
+.+.
T Consensus 214 -----~~d~----------------------------------------------------------------------- 217 (402)
T 3awk_A 214 -----PSET----------------------------------------------------------------------- 217 (402)
T ss_dssp -----CCTT-----------------------------------------------------------------------
T ss_pred -----CCcc-----------------------------------------------------------------------
Confidence 0000
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcC-CCccEEEEEEEEecCCCCC------------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN-AKPLARIIAYFDAATEPID------------ 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g-~~p~a~I~g~~~~~~~p~~------------ 235 (814)
+.+ ....+..++|||+|+||.+.+. .+ ..+..++.+.+.... |..
T Consensus 218 --~~~----------------~~~~~~lfGDGA~A~vl~~~~~---~~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g 275 (402)
T 3awk_A 218 --HLD----------------GLVGSALFGDGAAALIVGSDPV---PQEEKPLFEIHWAGEAVL-PDSDGAINGHLREAG 275 (402)
T ss_dssp --CHH----------------HHHHHHHBCCEEEEEEEESSCC---TTTCCCCEEEEEEEEEEC-TTCTTSEEEEEETTE
T ss_pred --CHH----------------HhhccccccCceEEEEEecCCC---ccccCCceEEEeeeEEee-CCCchhcceEEecCc
Confidence 000 0011223679999999976542 12 223346666654211 100
Q ss_pred ----CCCc--------HHHHHHHHHHHcCCC-CCCccEEecCCCchHHHHHHhhhcCCCCCCcccC-CCCccccCCCCCh
Q psy12877 236 ----FPIA--------PAFAIPTLLKNGGVA-KQDVALWEINEAFSVVVLANIKKLDIDPSKVNVH-GGAVSLGHPIGMS 301 (814)
Q Consensus 236 ----~~~~--------~~~a~~~al~~aGl~-~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gas 301 (814)
++.. ...+++++|+++|++ .+|| +|-+|.......-...+.||++++++-.+ --.--+||...++
T Consensus 276 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAs 354 (402)
T 3awk_A 276 LIFHLLKDVPGLISKNIDKVLAEPLEYVHFPSYNDM-FWAVHPGGPAILDQIEAKLGLSTDKMQASRDVLASYGNMSSAS 354 (402)
T ss_dssp EEEEECTTHHHHHHHHHHHHTHHHHHHTTCCCGGGE-EEEECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGH
T ss_pred eEEEeCchHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhH
Confidence 0101 124677899999998 7777 79999998877777889999999865321 0011267765555
Q ss_pred HHHHHHHHHHH
Q psy12877 302 GARIVIHLCHA 312 (814)
Q Consensus 302 G~~~l~e~v~q 312 (814)
-...+.+++.+
T Consensus 355 i~~~L~~~~~~ 365 (402)
T 3awk_A 355 VLFVLDQIRKN 365 (402)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 54445555443
No 119
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=99.06 E-value=6.1e-10 Score=123.90 Aligned_cols=189 Identities=12% Similarity=0.094 Sum_probs=127.4
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+++++..+|++..++ +++++.+|+|++.||..|.++|++|.++.|||+|+|.+|..-.
T Consensus 133 ~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~----------------- 195 (387)
T 3a5r_A 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTCFR----------------- 195 (387)
T ss_dssp ESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTTTCC-----------------
T ss_pred CCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccchhhc-----------------
Confidence 4578999999999986564 9999999999999999999999999999999999999875110
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
.+ ++.
T Consensus 196 -------~~-----------------------------------------------------------------~d~--- 200 (387)
T 3a5r_A 196 -------GP-----------------------------------------------------------------SET--- 200 (387)
T ss_dssp -------CC-----------------------------------------------------------------CSS---
T ss_pred -------CC-----------------------------------------------------------------Ccc---
Confidence 00 000
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcC-CCccEEEEEEEEecCCCCC------------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN-AKPLARIIAYFDAATEPID------------ 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g-~~p~a~I~g~~~~~~~p~~------------ 235 (814)
.+-...++..++|||+|+||.+.+.. + ..+..++.+.+.... |..
T Consensus 201 ------------------~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g 258 (387)
T 3a5r_A 201 ------------------HLDSMIGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIV-PESHGAIEGHLLESG 258 (387)
T ss_dssp ------------------CCSSTTHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEEC-TTCTTSEEEEEETTE
T ss_pred ------------------chhhccccceeccceeEEEEecCCCc---cccCCceEEEeeeEEEe-CCChHhcCceEcCCC
Confidence 00001123347899999999865421 2 222346776654321 110
Q ss_pred --C--CC--------cHHHHHHHHHHHcCCC-CCCccEEecCCCchHHHHHHhhhcCCCCCCcccC-CCCccccCCCCCh
Q psy12877 236 --F--PI--------APAFAIPTLLKNGGVA-KQDVALWEINEAFSVVVLANIKKLDIDPSKVNVH-GGAVSLGHPIGMS 301 (814)
Q Consensus 236 --~--~~--------~~~~a~~~al~~aGl~-~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gas 301 (814)
+ +. ....+++++|+++|++ .+|| +|-+|.+.....-...+.||++++++-.+ --.--+||..+++
T Consensus 259 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAs 337 (387)
T 3a5r_A 259 LSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSAT 337 (387)
T ss_dssp EEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGH
T ss_pred eEEEecchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhH
Confidence 0 00 0124778999999998 8888 89999998777767788999998865321 0011267776666
Q ss_pred HHHHHHHHHHHH
Q psy12877 302 GARIVIHLCHAL 313 (814)
Q Consensus 302 G~~~l~e~v~qL 313 (814)
-...+.+++.+-
T Consensus 338 i~~~L~~~~~~g 349 (387)
T 3a5r_A 338 VFFIMDEMRKKS 349 (387)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 555555555443
No 120
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=99.05 E-value=1.5e-10 Score=129.15 Aligned_cols=108 Identities=17% Similarity=0.133 Sum_probs=93.8
Q ss_pred ecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe-CCCCC
Q psy12877 387 RTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV-NKVCA 465 (814)
Q Consensus 387 rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv-~~~ca 465 (814)
+|++..+..... .+..+|+.+|+++||+++|+++++||.++++++.+ ...+..+..++..+|++..++.+.+ +.+|+
T Consensus 123 rtgi~~R~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~-~~~P~~a~~v~~~LGl~~~~~~~~v~~~~Ca 200 (413)
T 3v7i_A 123 SQTVQERTAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTT-PALPGLDVALANRLPLRGDTMLLPATQWACV 200 (413)
T ss_dssp CCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSS-CCSSCHHHHHHHHTTCCTTCEEEEESSCGGG
T ss_pred CCCHHHhCcccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCC-CCcCHHHHHHHHHhCCCCCceEEEeeCCccH
Confidence 566665543322 36789999999999999999999999999998876 3456789999999999876788999 99999
Q ss_pred cHHHHHHHHHHHHHcCCCCeEEEEeeecccc
Q psy12877 466 SGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 466 Sg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~ 496 (814)
+|+.||..|++.|++|.++.||++|+|.+|.
T Consensus 201 gg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~ 231 (413)
T 3v7i_A 201 AGTRSLALAADLVAADPDRVVLVVISEALST 231 (413)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEEecccc
Confidence 9999999999999999999999999999984
No 121
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=99.05 E-value=6e-10 Score=124.58 Aligned_cols=189 Identities=16% Similarity=0.120 Sum_probs=127.6
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+++++..+|++..++ +++++.+|+|++.||..|.++|++|.++.|||+|+|.+|..-.
T Consensus 142 ~p~~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al~~A~~~i~~g~~~~vLvvg~E~~s~~~~----------------- 204 (402)
T 1ee0_A 142 MPGADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVLRLAKDLAENNKGSRVLIVCSEITAILFH----------------- 204 (402)
T ss_dssp ESCHHHHHHHHHTCCTTCEEEEECSCCTTHHHHHHHHHHHHHHHSTTCCEEEEEEECGGGGCC-----------------
T ss_pred CChHHHHHHHHcCcCCCcceeeEECchhHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhhc-----------------
Confidence 4568999999999986664 9999999999999999999999999999999999999875110
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
.+. +.
T Consensus 205 -------~~~-----------------------------------------------------------------d~--- 209 (402)
T 1ee0_A 205 -------GPN-----------------------------------------------------------------EN--- 209 (402)
T ss_dssp -------CCC-----------------------------------------------------------------TT---
T ss_pred -------CCc-----------------------------------------------------------------cc---
Confidence 000 00
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcC-CCccEEEEEEEEecCCCCC------------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN-AKPLARIIAYFDAATEPID------------ 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g-~~p~a~I~g~~~~~~~p~~------------ 235 (814)
++-+...+..++|||+|+||.+.+. .+ ..+..++.+.+.... |..
T Consensus 210 ------------------~~~~~~~~~lfGDGA~A~vl~~~~~---~~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g 267 (402)
T 1ee0_A 210 ------------------HLDSLVAQALFGDGAAALIVGSGPH---LAVERPIFEIVSTDQTIL-PDTEKAMKLHLREGG 267 (402)
T ss_dssp ------------------CHHHHHHTTTBCCEEEEEEEESSCC---TTTCCCCEEEEEEEEEEC-TTCGGGEEEEEETTE
T ss_pred ------------------chhhhccceeEecceEEEEEecCCC---ccccCCceEEEeeeeEEc-CCchHhcCceeccCc
Confidence 0000112345789999999986542 12 222346766654321 110
Q ss_pred --C--CC--------cHHHHHHHHHHHcCCC-CCCccEEecCCCchHHHHHHhhhcCCCCCCcccC-CCCccccCCCCCh
Q psy12877 236 --F--PI--------APAFAIPTLLKNGGVA-KQDVALWEINEAFSVVVLANIKKLDIDPSKVNVH-GGAVSLGHPIGMS 301 (814)
Q Consensus 236 --~--~~--------~~~~a~~~al~~aGl~-~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gas 301 (814)
+ +. ....+++++|+++|++ .+|| +|-+|.+.....-...+.||++++++-.+ --.--+||..+++
T Consensus 268 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAs 346 (402)
T 1ee0_A 268 LTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSV-FWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISAC 346 (402)
T ss_dssp ECCEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGH
T ss_pred eEEEecchHHHHHHHHHHHHHHHHHHHcCCCccccc-eEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCchhhH
Confidence 0 10 1124778899999998 8888 89999998877777889999998865331 0011267766666
Q ss_pred HHHHHHHHHHHH
Q psy12877 302 GARIVIHLCHAL 313 (814)
Q Consensus 302 G~~~l~e~v~qL 313 (814)
-...+.+++.+-
T Consensus 347 i~~~L~~~~~~g 358 (402)
T 1ee0_A 347 VLFIIDEVRKRS 358 (402)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 555555555443
No 122
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=99.04 E-value=8.2e-10 Score=123.81 Aligned_cols=190 Identities=11% Similarity=0.038 Sum_probs=127.3
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+++++..+|++..+| +++++.+|+|++.||..|.++|++|.++.|||+|+|.+|..-...
T Consensus 155 ~p~~a~~v~~~LGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~--------------- 219 (413)
T 2p0u_A 155 MPGAELATAKLLGLRPNVRRVMMYQQGAFAGATVLRVAKDLAENNAGARVLAICSEVTAVTFRAP--------------- 219 (413)
T ss_dssp BSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECSTTTCCCC---------------
T ss_pred cCcHHHHHHHHhCCCCCcceEeEECCccHHHHHHHHHHHHHHHhCCCCEEEEEEEhhcchhccCC---------------
Confidence 4678999999999986676 999999999999999999999999999999999999987521000
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
.+.
T Consensus 220 ------~d~----------------------------------------------------------------------- 222 (413)
T 2p0u_A 220 ------SET----------------------------------------------------------------------- 222 (413)
T ss_dssp ------CTT-----------------------------------------------------------------------
T ss_pred ------Ccc-----------------------------------------------------------------------
Confidence 000
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcC-CCccEEEEEEEEecCCC--CC----------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN-AKPLARIIAYFDAATEP--ID---------- 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g-~~p~a~I~g~~~~~~~p--~~---------- 235 (814)
+.+ ...++..++|||+|+||.+.+. .+ ..+..++.+.+...... ..
T Consensus 223 --~~~----------------~~~~~~lfGDGA~A~vl~~~~~---~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~ 281 (413)
T 2p0u_A 223 --HID----------------GLVGSALFGDGAAAVIVGSDPR---PGIERPIYEMHWAGEMVLPESDGAIDGHLTEAGL 281 (413)
T ss_dssp --CHH----------------HHHHHHHBCCEEEEEEEESSCC---TTTCCCSEEEEEEEEEECTTCTTSSEEEEETTEE
T ss_pred --Chh----------------hhcccceeecccEEEEEecCCC---ccccCCceEEEecccEEeCCChhhcCceEecCce
Confidence 000 0011233679999999986542 12 22223666665421100 00
Q ss_pred ---CCC--------cHHHHHHHHHHHcCCC-CCCccEEecCCCchHHHHHHhhhcCCCCCCcccC-CCCccccCCCCChH
Q psy12877 236 ---FPI--------APAFAIPTLLKNGGVA-KQDVALWEINEAFSVVVLANIKKLDIDPSKVNVH-GGAVSLGHPIGMSG 302 (814)
Q Consensus 236 ---~~~--------~~~~a~~~al~~aGl~-~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gasG 302 (814)
++. ....+++++|+++|++ .+|| .|-+|.+.....-...+.||++++++-.+ --.--+||..+++-
T Consensus 282 ~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi 360 (413)
T 2p0u_A 282 VFHLLKDVPGLITKNIGGFLKDTKNLVGASSWNEL-FWAVHPGGPAILDQVEAKLELEKGKFQASRDILSDYGNMSSASV 360 (413)
T ss_dssp EEECCSCHHHHHHHHHHHHHHHHHHHTTCCSGGGS-EEEECCSSHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCGGGHH
T ss_pred EEEeccHHHHHHHHHHHHHHHHHHHHcCCCCccce-EEEECCCCHHHHHHHHHHhCCCHHHHHHHHHHHHHcCcchhhHH
Confidence 111 1134778999999998 7888 89999999888777889999998865321 00012677666665
Q ss_pred HHHHHHHHHHH
Q psy12877 303 ARIVIHLCHAL 313 (814)
Q Consensus 303 ~~~l~e~v~qL 313 (814)
...+.+++.+-
T Consensus 361 ~~~L~~~~~~g 371 (413)
T 2p0u_A 361 LFVLDRVRERS 371 (413)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 55555555443
No 123
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=99.03 E-value=3.6e-10 Score=125.28 Aligned_cols=59 Identities=12% Similarity=0.039 Sum_probs=53.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHC----CCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSL----GHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~s----G~~d~vLa~G~e~~s~ 68 (814)
.++.+.+++..+|++...+++.+ +.+|++++.+|..|.++|++ |.++.|||+|+|.+|.
T Consensus 116 ~p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~a~~~~G~~~~vLvv~~E~~s~ 179 (379)
T 3euo_A 116 NPGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALRTAANLCLGHTARGKPARILVLALEVSTT 179 (379)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGG
T ss_pred CCCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHHHHHHHHHhccccCCCCEEEEEEEEeehh
Confidence 57789999999999855558999 79999999999999999997 9999999999999875
No 124
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=99.03 E-value=6.8e-10 Score=123.57 Aligned_cols=188 Identities=17% Similarity=0.174 Sum_probs=124.8
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+.+++..+|++...+ ++.++.+|++++.||..|.++|++|.++.|||+|+|.+|..-.
T Consensus 137 ~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~----------------- 199 (393)
T 3ov2_A 137 MPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLSFR----------------- 199 (393)
T ss_dssp BSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGGTCC-----------------
T ss_pred CCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhcc-----------------
Confidence 5779999999999985554 8999999999999999999999999999999999999863100
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
++ ++ |
T Consensus 200 -------~~-----------------------------------------------------------------~d--~- 204 (393)
T 3ov2_A 200 -------GP-----------------------------------------------------------------NE--G- 204 (393)
T ss_dssp -------CC-----------------------------------------------------------------CT--T-
T ss_pred -------CC-----------------------------------------------------------------cc--c-
Confidence 00 00 0
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEecCCCCC-------------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID------------- 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~~~p~~------------- 235 (814)
+.+ ....|..++|||+|+||...+.. .. ..+..++...+.... |..
T Consensus 205 --~~~----------------~~~~~~lFGDGAaA~vl~~~~~~-~~-~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~g~ 263 (393)
T 3ov2_A 205 --DFE----------------ALAGQAGFGDGAGAVVVGADPLE-GI-EKPIYEIAAAMQETV-AESQGAVGGHLRAFGW 263 (393)
T ss_dssp --CHH----------------HHHHHHHBCCEEEEEEEESSCCT-TT-CCCSEEEEEEEEEEC-TTCTTSEEEEEETTEE
T ss_pred --chh----------------hhcccccccCccEEEEEEecCCC-cc-cCceeEEEecCcEEe-cCCcccCceeeeCCce
Confidence 000 00123346799999999865421 11 223335554443211 100
Q ss_pred ---CC--------CcHHHHHHHHHHHcCCCC-CCccEEecCCCchHHHHHHhhhcCCCCCCcccC-CCCccccCCCCChH
Q psy12877 236 ---FP--------IAPAFAIPTLLKNGGVAK-QDVALWEINEAFSVVVLANIKKLDIDPSKVNVH-GGAVSLGHPIGMSG 302 (814)
Q Consensus 236 ---~~--------~~~~~a~~~al~~aGl~~-~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gasG 302 (814)
+. .....+++++|+++|+++ +|| +|-+|.+.....-...+.||++++++-.+ --.--+||...+|=
T Consensus 264 ~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsi 342 (393)
T 3ov2_A 264 TFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV-FWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATV 342 (393)
T ss_dssp EEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-EEEECCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHH
T ss_pred EEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-EEEECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHH
Confidence 00 011357899999999997 888 89999998888888899999999876321 00012566555554
Q ss_pred HHHHHHHHH
Q psy12877 303 ARIVIHLCH 311 (814)
Q Consensus 303 ~~~l~e~v~ 311 (814)
...+.+++.
T Consensus 343 p~~L~~~~~ 351 (393)
T 3ov2_A 343 YFVMDELRK 351 (393)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444443
No 125
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=99.01 E-value=1.2e-09 Score=119.99 Aligned_cols=58 Identities=16% Similarity=0.182 Sum_probs=53.9
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..+.+++..+|++ ..+++.++.+|++++.++..|..+|++|.++.|||++.|.+|.
T Consensus 98 ~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~ 155 (350)
T 4ewp_A 98 TPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSD 155 (350)
T ss_dssp SSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred CCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeecee
Confidence 467899999999998 6789999999999999999999999999999999999999764
No 126
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=99.01 E-value=1.4e-09 Score=121.93 Aligned_cols=189 Identities=13% Similarity=0.094 Sum_probs=126.8
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccc
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDG 88 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 88 (814)
.++.+++++..+|++..++ +++++.+|+|++.||..|.++|++|.++.|||+|+|.+|..-. .
T Consensus 160 ~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~~--~-------------- 223 (413)
T 1xes_A 160 LPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFR--G-------------- 223 (413)
T ss_dssp ESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTCC--C--------------
T ss_pred cchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhhc--C--------------
Confidence 4678999999999986564 9999999999999999999999999999999999999875210 0
Q ss_pred ccccCcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCcccc
Q psy12877 89 IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 168 (814)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~ 168 (814)
+.+ .
T Consensus 224 -----~~d--------------------------------------------------------------------~--- 227 (413)
T 1xes_A 224 -----PSE--------------------------------------------------------------------T--- 227 (413)
T ss_dssp -----CCT--------------------------------------------------------------------T---
T ss_pred -----CCc--------------------------------------------------------------------c---
Confidence 000 0
Q ss_pred CCCHHhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcC-CCccEEEEEEEEecCCCCC------------
Q psy12877 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN-AKPLARIIAYFDAATEPID------------ 235 (814)
Q Consensus 169 ~~t~e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g-~~p~a~I~g~~~~~~~p~~------------ 235 (814)
..+ ...++..++|||+|+||.+.+. .+ ..+..++.+.+.... |..
T Consensus 228 --~~~----------------~~~~~~lfGDGA~A~vl~~~~~---~~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g 285 (413)
T 1xes_A 228 --HLD----------------SLVGQALFGDGASALIVGADPI---PQVEKACFEIVWTAQTVV-PNSEGAIGGKVREVG 285 (413)
T ss_dssp --CHH----------------HHHHHHHBCCEEEEEEEESSCC---TTTSCCSEEEEEEEEEEC-TTCTTTEEEEEETTE
T ss_pred --chh----------------hcccceeEecccEEEEEecCCC---ccccCCceEEEeeeeEEc-CCChhhcCcEEecCc
Confidence 000 0011223679999999986542 12 222346776664321 110
Q ss_pred ----CC--------CcHHHHHHHHHHHcCCC-CCCccEEecCCCchHHHHHHhhhcCCCCCCcccC-CCCccccCCCCCh
Q psy12877 236 ----FP--------IAPAFAIPTLLKNGGVA-KQDVALWEINEAFSVVVLANIKKLDIDPSKVNVH-GGAVSLGHPIGMS 301 (814)
Q Consensus 236 ----~~--------~~~~~a~~~al~~aGl~-~~DID~~e~~d~fa~~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gas 301 (814)
++ .....+++++|+++|++ .+|| .|-+|.+.....-...+.||++++++-.+ --.--+||..+++
T Consensus 286 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAs 364 (413)
T 1xes_A 286 LTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSAC 364 (413)
T ss_dssp EEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGH
T ss_pred eEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCcCchhh
Confidence 00 01134778899999998 8888 79999997777777789999999876320 0001267776666
Q ss_pred HHHHHHHHHHHH
Q psy12877 302 GARIVIHLCHAL 313 (814)
Q Consensus 302 G~~~l~e~v~qL 313 (814)
-...+.+++.+-
T Consensus 365 i~~~L~~~~~~g 376 (413)
T 1xes_A 365 VHFILDQTRKAS 376 (413)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 555555555443
No 127
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=99.01 E-value=7e-10 Score=123.21 Aligned_cols=58 Identities=17% Similarity=0.047 Sum_probs=53.8
Q ss_pred CChHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p-~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s 67 (814)
.++.+.+++..+|++..++ ++.++.+|++++.||..|.++|++|.++.|||+|+|.+|
T Consensus 131 ~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s 189 (387)
T 3oit_A 131 VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTL 189 (387)
T ss_dssp ESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGG
T ss_pred cccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccc
Confidence 4678999999999985554 899999999999999999999999999999999999987
No 128
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=99.00 E-value=9.5e-10 Score=120.90 Aligned_cols=95 Identities=18% Similarity=0.137 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEeccc-CCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQ-AGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~-~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|+++++||.+++++... ......++..++..+|++ ..++++++.+|+|+..||..|+++|+
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~~aC~~~~~al~~A~~~i~ 131 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLAQRCNGGMGAIELAGAYLG 131 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEcCccHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999998741 112235788999999996 68999999999999999999999999
Q ss_pred cCCCC--eEEEEeeecccc
Q psy12877 480 LGHQD--VMVAGGMESMSN 496 (814)
Q Consensus 480 sG~~d--vvLa~G~Es~s~ 496 (814)
+|.++ .||++|+|+++.
T Consensus 132 sg~~~~~~vLvvg~e~~s~ 150 (357)
T 3s3l_A 132 SGIGAGHAALLTTGDRFAG 150 (357)
T ss_dssp TTSSSSSEEEEEEEECCCT
T ss_pred cCCCCCCEEEEEEEecccc
Confidence 99999 999999999984
No 129
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=99.00 E-value=8.9e-10 Score=122.47 Aligned_cols=94 Identities=17% Similarity=0.121 Sum_probs=86.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHHc
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSL 480 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~s 480 (814)
+..+|+.+|+++||+++|+++++||.++++++.+....+..+..++..+|++ .++++++.+|+|++.||..|++.|++
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~--~~~~dv~~aC~g~~~aL~~A~~~i~~ 193 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG--GFAFDMNVACSSATFGLKTAADFVGG 193 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC--SEEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC--CeEEEECCccHHHHHHHHHHHHHHHC
Confidence 4689999999999999999999999999998866555567889999999994 68999999999999999999999999
Q ss_pred CCCCeEEEEeeecccc
Q psy12877 481 GHQDVMVAGGMESMSN 496 (814)
Q Consensus 481 G~~dvvLa~G~Es~s~ 496 (814)
|.++.||++|+|.+|.
T Consensus 194 g~~~~vLvvg~E~~S~ 209 (392)
T 3led_A 194 GSVDAVLMVNPEICSG 209 (392)
T ss_dssp TSCSEEEEEEEEEGGG
T ss_pred CCCCEEEEEeehhcCC
Confidence 9999999999999974
No 130
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=99.00 E-value=1.1e-09 Score=122.39 Aligned_cols=96 Identities=16% Similarity=0.077 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+ +++++.+|+||+.||..|+++|
T Consensus 113 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i 191 (402)
T 3awk_A 113 LEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSG-VDMPGADFQLAKLLGLRPTVKRVMLYQQGAYAGATVLRVAKDLA 191 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CcCChHHHHHHHHcCCCCccceeeEECCccHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999998765 345678899999999986565 8999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+++||++|+|.++.
T Consensus 192 ~sg~~~~vLvvg~E~~s~ 209 (402)
T 3awk_A 192 ENNKGARVLVACSEVTAV 209 (402)
T ss_dssp HTSTTCEEEEEEEECTTT
T ss_pred HcCCCCEEEEEEEeccch
Confidence 999999999999999874
No 131
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.99 E-value=8.9e-10 Score=147.34 Aligned_cols=184 Identities=16% Similarity=0.210 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHcCCCCcCcc----eEEEEecccCC-------------------CCChHHHHHHHHcCCCCCccEEE
Q psy12877 403 TKLGAVAIESAIQKANMDKSDVQ----EVYMGNVCQAG-------------------LGQAPCRQAVIFAGLPKSTVCTT 459 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~~~dID----~vivG~~~~~~-------------------~~~~~a~~~a~~~Gl~~~~~~~t 459 (814)
..|+.+++.+||+|||+++.+++ +|++|...... .....+..++..+|+ +.|.++
T Consensus 79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~t 156 (2512)
T 2vz8_A 79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSIT 156 (2512)
T ss_dssp HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCcee
Confidence 34889999999999999987665 58888653210 112467889999999 479999
Q ss_pred eCCCCCcHHHHHHHHHHHHHcCCCCeEEEEeeeccccCccccCCCccCCCCccccccccccccccccccccHHHHHHHHH
Q psy12877 460 VNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTA 539 (814)
Q Consensus 460 v~~~caSg~~Ai~~Aa~~I~sG~~dvvLa~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~~ 539 (814)
++++|+|++.||+.|+++|++|++|++||||++.+..... + ..|
T Consensus 157 v~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~-----------------------~-----~~~-------- 200 (2512)
T 2vz8_A 157 IDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNS-----------------------S-----LQF-------- 200 (2512)
T ss_dssp EECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHH-----------------------H-----HHH--------
T ss_pred eccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHH-----------------------H-----HHH--------
Confidence 9999999999999999999999999999999997642100 0 000
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHhhhcCCccccccceeccCCCCCcceEeccCCccccCCHHHhhccccccccCCCcccc
Q psy12877 540 KKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTA 619 (814)
Q Consensus 540 ~~~Gitre~~~~~a~~s~~~A~~a~p~a~~~~ei~p~t~~~~~~s~~i~~~~D~~~~~~~~e~l~~~~p~f~~~~~plt~ 619 (814)
.+.|. -.|.+.-+ | |+..
T Consensus 201 ~~~~~------------------ls~~g~c~----~----------------------------------Fd~~------ 218 (2512)
T 2vz8_A 201 MKLGM------------------LSQDGTCR----S----------------------------------FDAE------ 218 (2512)
T ss_dssp HHTTC------------------BCTTCSCC----S----------------------------------SSTT------
T ss_pred ccCCC------------------CCCCCCCC----C----------------------------------CCCC------
Confidence 00000 01111111 0 1100
Q ss_pred CCCCccchhhhhhhhcCHHHHHHcCCCceEEEEEeeeccCCCC---C---CCchHHhHHHHHHHhcCC-CcceeEehh
Q psy12877 620 GNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI---D---FPIAPAFAIPTLLKNGGQ-LSQFWYDEN 690 (814)
Q Consensus 620 ~d~s~~sDGAAAvvL~s~e~A~~~g~~p~a~I~g~~~~~~~p~---~---~~~g~~~A~~~~~~~~~~-~sq~~y~e~ 690 (814)
.|--..+||+++|||.+.+.|+ ++++.|+|++...+... . .+.+...+++++|+++|+ .++++|.|-
T Consensus 219 adG~~~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yvea 292 (2512)
T 2vz8_A 219 GTGYCRAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEA 292 (2512)
T ss_dssp CCCBCBBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEEC
T ss_pred CCCcceeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 1112289999999999999885 58999999998766421 1 123556799999999999 689999984
No 132
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=98.99 E-value=1.3e-09 Score=122.21 Aligned_cols=96 Identities=15% Similarity=0.060 Sum_probs=86.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+ +++++.+|+|+..||..|+++|
T Consensus 118 ~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~aCas~~~AL~~A~~~i 196 (413)
T 2p0u_A 118 AQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSG-VNMPGAELATAKLLGLRPNVRRVMMYQQGAFAGATVLRVAKDLA 196 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCC-cccCcHHHHHHHHhCCCCCcceEeEECCccHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999998765 345668899999999986565 8999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+++||++|+|.++.
T Consensus 197 ~sg~~~~vLvvg~E~~s~ 214 (413)
T 2p0u_A 197 ENNAGARVLAICSEVTAV 214 (413)
T ss_dssp HHSTTCEEEEEEEECSTT
T ss_pred HhCCCCEEEEEEEhhcch
Confidence 999999999999999874
No 133
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=98.99 E-value=1.5e-09 Score=120.89 Aligned_cols=96 Identities=15% Similarity=0.053 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+ +++++.+|+|+..||..|+++|
T Consensus 100 ~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al~~A~~~i 178 (389)
T 1i88_A 100 VEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG-VDMPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLA 178 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCC-CCCchHHHHHHHHcCcCCCchhheeECCccHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999998765 335568899999999986555 8999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+++||++|+|.++.
T Consensus 179 ~~g~~~~vLvvg~E~~s~ 196 (389)
T 1i88_A 179 ENNKGARVLVVCSEVTAV 196 (389)
T ss_dssp HTSTTCEEEEEEEECGGG
T ss_pred HcCCCCEEEEEEEecccH
Confidence 999999999999999874
No 134
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=98.99 E-value=1e-09 Score=121.54 Aligned_cols=96 Identities=16% Similarity=0.113 Sum_probs=85.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeC-CCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN-KVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~-~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+.++++ .+|+|++.||..|++.|
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i 171 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTG-IIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLA 171 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999998764 23456788999999998557999996 89999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+|+||++|+|.++.
T Consensus 172 ~~g~~~~vLv~g~e~~s~ 189 (374)
T 2h84_A 172 KASPRNRILVVCTEVCSL 189 (374)
T ss_dssp TTCTTCEEEEEEEECCGG
T ss_pred HcCCCCEEEEEEEEecch
Confidence 999999999999999873
No 135
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=98.99 E-value=2.4e-09 Score=114.75 Aligned_cols=185 Identities=17% Similarity=0.180 Sum_probs=117.6
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCCCCCccccCcccCCCCccccccccc
Q psy12877 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYD 92 (814)
Q Consensus 13 ~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (814)
.+..++..+| +|++.++.+|+|++.++..|+++|++|.++.|||+|+|.+|+.+...+ +
T Consensus 91 ~A~~va~~Lg----ipafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r-----~------------ 149 (347)
T 3lma_A 91 TANYVARHLK----IPFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFR-----Y------------ 149 (347)
T ss_dssp THHHHHHHHC----CCEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC-------------------
T ss_pred HHHHHHHHhC----CCEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhcc-----C------------
Confidence 4556666664 589999999999999999999999999999999999999997543110 0
Q ss_pred CcccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCeeeeeecCCCCCceeeccCCccccCCCH
Q psy12877 93 GLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINF 172 (814)
Q Consensus 93 ~~~~~~~~~~~~~~a~~~~~~~gitre~~~~~a~~s~~~A~~a~~ag~~~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~ 172 (814)
|.
T Consensus 150 ------------------------------------------------------p~------------------------ 151 (347)
T 3lma_A 150 ------------------------------------------------------PT------------------------ 151 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------cc------------------------
Confidence 00
Q ss_pred HhhhcCCceeccCCCccccCCCCCcCceeeEEEEcCHHHHHHcCCCccEEEEEEEEec------CCCCCCCCc--H--HH
Q psy12877 173 EKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAA------TEPIDFPIA--P--AF 242 (814)
Q Consensus 173 e~~~~~~~~~~~~~~pl~~~~~~~~~DGAaAvvl~s~~~A~~~g~~p~a~I~g~~~~~------~~p~~~~~~--~--~~ 242 (814)
++...+|.+ ..-..|||+|+||..+. ..| +|.+...-. .||..|+.. | ..
T Consensus 152 -e~g~q~p~t-----------a~~t~dGAGA~VL~~~g------~~p--~I~~~t~Gkvvd~g~~d~~nmg~amaPaA~~ 211 (347)
T 3lma_A 152 -EYGGQKPGT-----------ATSTVTGSGAVVLSQQP------GGI--KITSATVGRVIDLGITDSQDMGSAMAPAAAD 211 (347)
T ss_dssp ------------------------CCCEEEEEEEESSC------CSE--EEEEEECCCCBCCSCCCTTCHHHHHHHHHHH
T ss_pred -hhcccCCch-----------hcEEccceeEEEEEecC------CCC--ceeeeeeeeeeccCCCCCCCccccchHHHHH
Confidence 000011111 11134899999998642 223 455433211 145454422 2 34
Q ss_pred HHHHHHHHcCCCCCCccEEe---cCCCchHHHHHHhhhcCCCCCCcccCCCCcccc---------CCCCChHHHHHHHHH
Q psy12877 243 AIPTLLKNGGVAKQDVALWE---INEAFSVVVLANIKKLDIDPSKVNVHGGAVSLG---------HPIGMSGARIVIHLC 310 (814)
Q Consensus 243 a~~~al~~aGl~~~DID~~e---~~d~fa~~~l~~~e~lg~~~~~vN~~GG~la~G---------hp~gasG~~~l~e~v 310 (814)
.+.+.|+++|++++|+|+|- +|..........++.+|++.+++-..=|.+-++ ---|.+.......++
T Consensus 212 ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~ 291 (347)
T 3lma_A 212 TIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVVTFAHIF 291 (347)
T ss_dssp HHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHHHHHHTHH
T ss_pred HHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHHHHHHHHH
Confidence 66889999999999999999 555555555667788898875322222222222 112567777777888
Q ss_pred HHHHcC
Q psy12877 311 HALKSG 316 (814)
Q Consensus 311 ~qLr~g 316 (814)
.+|+.|
T Consensus 292 ~~~~~g 297 (347)
T 3lma_A 292 KEIEAG 297 (347)
T ss_dssp HHHHTT
T ss_pred HHHhcC
Confidence 888853
No 136
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=98.97 E-value=1.7e-09 Score=120.43 Aligned_cols=94 Identities=15% Similarity=0.145 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|+++++||.++++++.+ ...+..+..++..+|++...+ ++.++.+|+++..||..|++.|+
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~ 179 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-IDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAE 179 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999998866 446678999999999986544 89999999999999999999999
Q ss_pred cCCCCeEEEEeeeccc
Q psy12877 480 LGHQDVMVAGGMESMS 495 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s 495 (814)
+|.++.||++|+|.+|
T Consensus 180 sg~~~~vLvvg~E~~s 195 (393)
T 3ov2_A 180 NNRGARVLVVACEITV 195 (393)
T ss_dssp HSTTCEEEEEEEECGG
T ss_pred cCCCCEEEEEEEeccc
Confidence 9999999999999996
No 137
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=98.97 E-value=1.6e-09 Score=120.56 Aligned_cols=96 Identities=16% Similarity=0.056 Sum_probs=85.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+ +++++.+|+|+..||..|+++|
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i 174 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAG-VDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIA 174 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999998764 234567899999999986554 8999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+++||++|+|.++.
T Consensus 175 ~~g~~~~vLvvg~e~~s~ 192 (387)
T 3a5r_A 175 ENNKGARVLIVCSEMTTT 192 (387)
T ss_dssp HHSTTCEEEEEEEECCTT
T ss_pred HhCCCCEEEEEEEeccch
Confidence 999999999999999874
No 138
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=98.97 E-value=1.5e-09 Score=121.62 Aligned_cols=95 Identities=16% Similarity=0.110 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+ +++++.+|+|++.||..|+++|+
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~ 202 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTT-PDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAE 202 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCC-CEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999998765 234567889999999986553 89999999999999999999999
Q ss_pred cCCCCeEEEEeeecccc
Q psy12877 480 LGHQDVMVAGGMESMSN 496 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s~ 496 (814)
+|.+|+||++|+|.++.
T Consensus 203 ~G~~~~vLvvg~E~~s~ 219 (413)
T 1xes_A 203 NNRGARVLVICSETTAV 219 (413)
T ss_dssp TSTTCCEEEEEEECTTT
T ss_pred cCCCCEEEEEEehhhhh
Confidence 99999999999999874
No 139
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=98.95 E-value=1.5e-09 Score=120.50 Aligned_cols=94 Identities=17% Similarity=0.095 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|+++++||.++++++.+ ...+..+..++..+|++...+ ++.++.+|+++..||..|.+.|+
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~ 173 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAE 173 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999998866 345678899999999986543 89999999999999999999999
Q ss_pred cCCCCeEEEEeeeccc
Q psy12877 480 LGHQDVMVAGGMESMS 495 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s 495 (814)
+|.++.||++|+|.+|
T Consensus 174 sg~~~~vLvvg~E~~s 189 (387)
T 3oit_A 174 NSRGARVLVVAAELTL 189 (387)
T ss_dssp SSTTCEEEEEEEECGG
T ss_pred cCCCCEEEEEEEeccc
Confidence 9999999999999997
No 140
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=98.95 E-value=1.6e-09 Score=121.38 Aligned_cols=96 Identities=15% Similarity=0.049 Sum_probs=86.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+ +++++.+|+||..||..|++.|
T Consensus 113 ~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i 191 (406)
T 2d3m_A 113 PGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCG-VDMPSADFQCAKLLGLHANVNKYCIYMQGAYAGGTVMRYAKDLA 191 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCCHHHHHHHHcCcCCCcceeeeEcCccHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999998765 234567899999999985555 8999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+|+||++|+|.++.
T Consensus 192 ~~g~~~~vLvvg~E~~s~ 209 (406)
T 2d3m_A 192 ENNRGARVLVVCAELTIM 209 (406)
T ss_dssp HTSTTCEEEEEEEECGGG
T ss_pred HcCCCCEEEEEEEEecch
Confidence 999999999999999874
No 141
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=98.94 E-value=2.8e-09 Score=116.97 Aligned_cols=99 Identities=17% Similarity=0.212 Sum_probs=90.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHH
Q psy12877 398 VSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQT 477 (814)
Q Consensus 398 ~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~ 477 (814)
.+.+..+|+++|+++||+++|+++++||.+++++..+....+..+..++..+|++ ..+++.++.+|+++..||..|.+.
T Consensus 58 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~~~ 136 (350)
T 4ewp_A 58 AEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQADAL 136 (350)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhhhh
Confidence 3578999999999999999999999999999998877655677889999999997 467999999999999999999999
Q ss_pred HHcCCCCeEEEEeeeccccC
Q psy12877 478 LSLGHQDVMVAGGMESMSNV 497 (814)
Q Consensus 478 I~sG~~dvvLa~G~Es~s~~ 497 (814)
|++|..+.||++++|.+|..
T Consensus 137 i~~g~~~~~Lvv~~E~~s~~ 156 (350)
T 4ewp_A 137 VRSGTARHVLVVGVERLSDV 156 (350)
T ss_dssp HHTTSCSEEEEEEEEEGGGG
T ss_pred hhCCCccceeEeeeeeceec
Confidence 99999999999999998743
No 142
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=98.94 E-value=2.2e-09 Score=119.13 Aligned_cols=95 Identities=16% Similarity=0.062 Sum_probs=85.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe-CCCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv-~~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+.+++ +.+|+|++.||..|++.|
T Consensus 82 ~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i 160 (382)
T 1u0m_A 82 REAKSRVPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFC 160 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHH
Confidence 45679999999999999999999999999998765 3345678899999999855789999 999999999999999999
Q ss_pred HcCCCCeEEEEeeeccc
Q psy12877 479 SLGHQDVMVAGGMESMS 495 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s 495 (814)
++|.+|+||++|+|.++
T Consensus 161 ~~g~~~~vLv~g~e~~s 177 (382)
T 1u0m_A 161 TAYPEANALIVACEFCS 177 (382)
T ss_dssp HHSTTCEEEEEEEEEGG
T ss_pred HcCCCCEEEEEEEeccc
Confidence 99999999999999986
No 143
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=98.93 E-value=1.1e-09 Score=123.93 Aligned_cols=59 Identities=14% Similarity=0.101 Sum_probs=53.8
Q ss_pred CChHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHC----CCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSL----GHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv-~~~CaSg~~ai~~A~~~I~s----G~~d~vLa~G~e~~s~ 68 (814)
.+..+.+++..+|++...+++.| +.+|++++.+|..|.++|++ |.++.|||+|+|.+|.
T Consensus 145 ~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~ 208 (465)
T 3e1h_A 145 NPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTT 208 (465)
T ss_dssp SSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGG
T ss_pred CCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecch
Confidence 56789999999999855558999 89999999999999999997 9999999999999875
No 144
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=98.93 E-value=2e-09 Score=120.27 Aligned_cols=96 Identities=18% Similarity=0.081 Sum_probs=85.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCcc-EEEeCCCCCcHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTV-CTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~-~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..+|++...+ +++++.+|+|++.||..|+++|
T Consensus 105 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al~~A~~~i 183 (402)
T 1ee0_A 105 TGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAG-VDMPGADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVLRLAKDLA 183 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSC-CEESCHHHHHHHHHTCCTTCEEEEECSCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCChHHHHHHHHcCcCCCcceeeEECchhHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999998754 234567899999999986554 8999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.+++||++|+|.++.
T Consensus 184 ~~g~~~~vLvvg~E~~s~ 201 (402)
T 1ee0_A 184 ENNKGSRVLIVCSEITAI 201 (402)
T ss_dssp HHSTTCCEEEEEEECGGG
T ss_pred HcCCCCEEEEEEEeccch
Confidence 999999999999999874
No 145
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=98.91 E-value=1.1e-09 Score=121.58 Aligned_cols=59 Identities=8% Similarity=0.084 Sum_probs=55.3
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..+.+++..+|++..++++.++.+|++++.||..|..+|++|.++.|||+|+|.+|.
T Consensus 90 ~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~ 148 (388)
T 3v4n_A 90 SKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKY 148 (388)
T ss_dssp SSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECC
T ss_pred CccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhcc
Confidence 46789999999999866999999999999999999999999999999999999999765
No 146
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=98.90 E-value=2.8e-09 Score=115.94 Aligned_cols=93 Identities=16% Similarity=0.175 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHHH
Q psy12877 400 LSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 400 ~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I~ 479 (814)
.+..+|+.+|+++||+|+|+ ++||.+++++..+....+..+..++..+|++. .+.++++.+|+|++.||..|++.|+
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~~-~~~~~v~~aCas~~~Al~~A~~~i~ 127 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLVG-ALAFDLSAAATGFVYGLASVGSLIS 127 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCTT-SEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCCC-CcEEEEcCcChHHHHHHHHHHHHHH
Confidence 57899999999999999999 89999999987654334457889999999974 7999999999999999999999999
Q ss_pred cCCCCeEEEEeeeccc
Q psy12877 480 LGHQDVMVAGGMESMS 495 (814)
Q Consensus 480 sG~~dvvLa~G~Es~s 495 (814)
+|.+|+||++|+|.++
T Consensus 128 ~g~~~~vLv~g~e~~s 143 (331)
T 2x3e_A 128 AGLADSALLVGVDTFS 143 (331)
T ss_dssp TTSCSEEEEEEEECGG
T ss_pred cCCCCEEEEEEeeccc
Confidence 9999999999999976
No 147
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=98.89 E-value=2.7e-09 Score=120.80 Aligned_cols=111 Identities=8% Similarity=0.023 Sum_probs=93.1
Q ss_pred EeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCC--CCCccEEE
Q psy12877 382 IVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGL--PKSTVCTT 459 (814)
Q Consensus 382 IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl--~~~~~~~t 459 (814)
+.|.+++.+.... .+.+..+|+.+|+++||+++|+++++||.+++|+..+....+..+..++..+|+ +...++++
T Consensus 35 ~~g~G~~~~~~~~---~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~ 111 (450)
T 2f82_A 35 TIGLGQDCLAFCT---ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVD 111 (450)
T ss_dssp TTTSCCCEEECCC---TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCE
T ss_pred hhhhCceeeeeCC---CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceEEE
Confidence 4555554433211 257899999999999999999999999999999876554466788999998898 44679999
Q ss_pred eCCCCCcHHHHHHHHHHHHHcCCC--CeEEEEeeeccc
Q psy12877 460 VNKVCASGMKAIMLASQTLSLGHQ--DVMVAGGMESMS 495 (814)
Q Consensus 460 v~~~caSg~~Ai~~Aa~~I~sG~~--dvvLa~G~Es~s 495 (814)
++.+|+||..||..|.+.|++|.+ +.|||+|+|.++
T Consensus 112 v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~ 149 (450)
T 2f82_A 112 STNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV 149 (450)
T ss_dssp ECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc
Confidence 999999999999999999999998 999999999875
No 148
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=98.87 E-value=5.9e-09 Score=115.44 Aligned_cols=95 Identities=12% Similarity=0.076 Sum_probs=84.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe-CCCCCcHHHHHHHHHHHHH
Q psy12877 401 SATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLS 479 (814)
Q Consensus 401 ~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv-~~~caSg~~Ai~~Aa~~I~ 479 (814)
+..+|+.+|+++||+++|+++++||.++++++. ....+..+..++..+|++.....+.+ +.+|++|..||..|.+.|+
T Consensus 80 ~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t-~~~~p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 158 (379)
T 3euo_A 80 DGVPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALRTAANLCL 158 (379)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecC-CCCCCCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999876 44466789999999999855448999 7999999999999999999
Q ss_pred c----CCCCeEEEEeeecccc
Q psy12877 480 L----GHQDVMVAGGMESMSN 496 (814)
Q Consensus 480 s----G~~dvvLa~G~Es~s~ 496 (814)
+ |.++.||++|+|.+|.
T Consensus 159 a~~~~G~~~~vLvv~~E~~s~ 179 (379)
T 3euo_A 159 GHTARGKPARILVLALEVSTT 179 (379)
T ss_dssp HHHHTTCCCEEEEEEEECCGG
T ss_pred hccccCCCCEEEEEEEEeehh
Confidence 8 9999999999999874
No 149
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=98.83 E-value=5.3e-09 Score=117.44 Aligned_cols=114 Identities=11% Similarity=0.061 Sum_probs=95.1
Q ss_pred eeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCC--CCCccE
Q psy12877 380 VFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGL--PKSTVC 457 (814)
Q Consensus 380 V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl--~~~~~~ 457 (814)
.+..|.+++.+.... .+.+..+|+++|+++||+++|+++++||.+++++..+....+..+..+...+|+ ....++
T Consensus 35 ~~~~Gig~r~~~va~---~~E~~~~La~~Aa~~AL~~agi~~~dId~IivaT~t~~~~~ps~A~~v~~~LGl~g~~~~~a 111 (460)
T 2v4w_A 35 KYTVGLGQTRMGFCS---VQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEG 111 (460)
T ss_dssp CCCCCCCCCEEECCC---TTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBC
T ss_pred HeeeeeeeEEEEECC---CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCCCCCCcEE
Confidence 355666666543221 146889999999999999999999999999999876655456678889999998 235788
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHcCCC--CeEEEEeeecccc
Q psy12877 458 TTVNKVCASGMKAIMLASQTLSLGHQ--DVMVAGGMESMSN 496 (814)
Q Consensus 458 ~tv~~~caSg~~Ai~~Aa~~I~sG~~--dvvLa~G~Es~s~ 496 (814)
+.++.+|++|..||..|.+.|++|.+ +.|||+|+|.++.
T Consensus 112 ~Dv~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~~s~ 152 (460)
T 2v4w_A 112 IDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVY 152 (460)
T ss_dssp CEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEECC
T ss_pred EEecchhHHHHHHHHHHHHHHHhCCccCCEEEEEecccccc
Confidence 99999999999999999999999996 9999999999873
No 150
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=98.81 E-value=1.3e-08 Score=115.19 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEe-CCCCCcHHHHHHHHHHHHHc-
Q psy12877 403 TKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTV-NKVCASGMKAIMLASQTLSL- 480 (814)
Q Consensus 403 ~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv-~~~caSg~~Ai~~Aa~~I~s- 480 (814)
.+|+.+|+++||+++|+++++||.++++++. ....+..+..++..+|++.....+.+ +.+|++|..||..|.+.|++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~ 189 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGH 189 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcc
Confidence 5899999999999999999999999999876 34466789999999999855448999 79999999999999999997
Q ss_pred ---CCCCeEEEEeeecccc
Q psy12877 481 ---GHQDVMVAGGMESMSN 496 (814)
Q Consensus 481 ---G~~dvvLa~G~Es~s~ 496 (814)
|.++.||++|+|.+|.
T Consensus 190 ~~~G~~~~vLVvg~E~~S~ 208 (465)
T 3e1h_A 190 TARGKPARILVLALEVSTT 208 (465)
T ss_dssp HHTTCCCEEEEEEEECCGG
T ss_pred cccCCCCEEEEEEEeecch
Confidence 9999999999999874
No 151
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=98.80 E-value=5.4e-09 Score=116.95 Aligned_cols=59 Identities=8% Similarity=-0.000 Sum_probs=53.9
Q ss_pred CChHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEEeeccCCC
Q psy12877 10 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~G~e~~s~ 68 (814)
.+..+.+++..+|++..++++.++.+|+++..||..|..+|++|.++.|||+|+|.+|.
T Consensus 119 ~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvgae~~s~ 177 (425)
T 3sqz_A 119 SKAGAVYVHSLLGIQPFARSFEMKEAAYSATAALNYAKLHVEKHPDTRVLVLASDIAKY 177 (425)
T ss_dssp SSCHHHHHHHHTTCCSSCEEEEECCC-CHHHHHHHHHHHHHHHSTTCEEEEEEEEEECC
T ss_pred cchHHHHHHHHhCCCCCeeEEEEcCHhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhcc
Confidence 45689999999999856999999999999999999999999999999999999999764
No 152
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=98.79 E-value=1.4e-08 Score=114.87 Aligned_cols=58 Identities=7% Similarity=-0.033 Sum_probs=53.4
Q ss_pred CChHHHHHHHHcCC--CCCcceEEecCCCchHHHHHHHHHHHHHCCCc--CEEEEEeeccCC
Q psy12877 10 GQAPCRQAVIFAGL--PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQ--DVMVAGGMESMS 67 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl--~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~--d~vLa~G~e~~s 67 (814)
.+..+.+++..+|+ +..+++++++.+|+||+.||..|.++|++|.+ +.|||+|+|.++
T Consensus 88 ~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~ 149 (450)
T 2f82_A 88 SKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV 149 (450)
T ss_dssp SSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC
T ss_pred CCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc
Confidence 56799999999999 44799999999999999999999999999998 999999999864
No 153
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=98.73 E-value=9.6e-09 Score=113.93 Aligned_cols=96 Identities=14% Similarity=0.150 Sum_probs=88.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++| +++||.+++++..+....+..+..++..+|++...+++.++.+|++|..||..|.+.|
T Consensus 53 ~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i 130 (388)
T 3v4n_A 53 SQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKNHV 130 (388)
T ss_dssp TCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHHHH
Confidence 57899999999999999997 8999999999887665566789999999999865899999999999999999999999
Q ss_pred HcCCCCeEEEEeeecccc
Q psy12877 479 SLGHQDVMVAGGMESMSN 496 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~ 496 (814)
++|.++.||++|+|.++.
T Consensus 131 ~sg~~~~vLVvg~e~~s~ 148 (388)
T 3v4n_A 131 ALHPDKKVLVVAADIAKY 148 (388)
T ss_dssp HHCTTCEEEEEEEEEECC
T ss_pred hcCCCCEEEEEEehhhcc
Confidence 999999999999999875
No 154
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=98.71 E-value=2.4e-08 Score=113.62 Aligned_cols=111 Identities=9% Similarity=0.103 Sum_probs=92.2
Q ss_pred ceeEeceeecccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHH---HHcCCCCCc
Q psy12877 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAV---IFAGLPKST 455 (814)
Q Consensus 379 ~V~IvG~~rTp~~~~~g~~~~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a---~~~Gl~~~~ 455 (814)
..++.|.|.+.+..... +.+..+|+++|+++||+++|+++++||.+++++..+....+..+..++ ..+|++ ..
T Consensus 53 ~~~~~~~Gi~~r~~~~~---~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~-~~ 128 (478)
T 2p8u_A 53 GKYTIGLGQAKMGFCTD---REDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNT-DI 128 (478)
T ss_dssp TCCCCCCCCCEEECCCT---TCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCC-CC
T ss_pred hHhecccCceEEEeCCC---CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCC-Cc
Confidence 45677877776654321 478999999999999999999999999999998765444556777777 345555 57
Q ss_pred cEEEeCCCCCcHHHHHHHHHHHHHcCC--CCeEEEEeeec
Q psy12877 456 VCTTVNKVCASGMKAIMLASQTLSLGH--QDVMVAGGMES 493 (814)
Q Consensus 456 ~~~tv~~~caSg~~Ai~~Aa~~I~sG~--~dvvLa~G~Es 493 (814)
+++.++.+|++|..||..|.+.|++|. .+.|||+|+|.
T Consensus 129 ~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 129 EGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp BCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred eEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 899999999999999999999999999 99999999995
No 155
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=98.69 E-value=2e-08 Score=112.36 Aligned_cols=97 Identities=9% Similarity=0.046 Sum_probs=86.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+.+|+++||+++| +++||.+++++..+....+..+..++..+|++...+++.++.+|++|..||..|.+.|
T Consensus 82 ~e~~~~La~~Aa~~aL~~ag--~~dId~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i 159 (425)
T 3sqz_A 82 TDDVVTLAAGSANEILTAED--KEKIDMVILATESSVDQSKAGAVYVHSLLGIQPFARSFEMKEAAYSATAALNYAKLHV 159 (425)
T ss_dssp TSCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSCCSCSSSCHHHHHHHHTTCCSSCEEEEECCC-CHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCC--hhhCCEEEEEecccccccchHHHHHHHHhCCCCCeeEEEEcCHhHHHHHHHHHHHHHH
Confidence 47899999999999999998 9999999999876654456788999999999865899999999999999999999999
Q ss_pred HcCCCCeEEEEeeeccccC
Q psy12877 479 SLGHQDVMVAGGMESMSNV 497 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es~s~~ 497 (814)
++|.++.|||+|+|.++..
T Consensus 160 ~sg~~~~vLVvgae~~s~~ 178 (425)
T 3sqz_A 160 EKHPDTRVLVLASDIAKYG 178 (425)
T ss_dssp HHSTTCEEEEEEEEEECCC
T ss_pred HcCCCCeEEEEEEehhccc
Confidence 9999999999999998753
No 156
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=98.66 E-value=2.2e-08 Score=111.55 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=84.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTL 478 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa~~I 478 (814)
+.+..+|+..|+++||++ +++++||.+++|+..+....+..+..++..+|++...++++++.+|+||..||..|++.|
T Consensus 48 ~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I 125 (396)
T 1xpm_A 48 NQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYL 125 (396)
T ss_dssp TCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHH
Confidence 478899999999999998 789999999999876654556789999999999866899999999999999999999999
Q ss_pred HcCCCCeEEEEeeec
Q psy12877 479 SLGHQDVMVAGGMES 493 (814)
Q Consensus 479 ~sG~~dvvLa~G~Es 493 (814)
++|.+++||++|+|.
T Consensus 126 ~sg~~~~vLvvg~e~ 140 (396)
T 1xpm_A 126 ATRPNEKVLVIATDT 140 (396)
T ss_dssp TTCTTCEEEEEEEEE
T ss_pred HcCCCCEEEEEeehh
Confidence 999999999999996
No 157
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=98.36 E-value=5.7e-07 Score=100.96 Aligned_cols=58 Identities=7% Similarity=-0.036 Sum_probs=52.4
Q ss_pred CChHHHHHHHHcCC--CCCcceEEecCCCchHHHHHHHHHHHHHCCCc--CEEEEEeeccCC
Q psy12877 10 GQAPCRQAVIFAGL--PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQ--DVMVAGGMESMS 67 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl--~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~--d~vLa~G~e~~s 67 (814)
.+..+-.++..+|+ ...++++.++.+|+++..||..|..+|++|.+ +.|||+|+|.++
T Consensus 90 ~ps~A~~v~~~LGl~g~~~~~a~Dv~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~~s 151 (460)
T 2v4w_A 90 SKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAV 151 (460)
T ss_dssp SSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC
T ss_pred CCcHHHHHHHHhCCCCCCCcEEEEecchhHHHHHHHHHHHHHHHhCCccCCEEEEEeccccc
Confidence 35678899999999 34789999999999999999999999999985 999999999975
No 158
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=98.36 E-value=8.2e-07 Score=100.76 Aligned_cols=94 Identities=10% Similarity=0.035 Sum_probs=79.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCChHHHHHHHHcCCC--CCccEEEeCCCCCcHHHHHHHHHH
Q psy12877 399 SLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLP--KSTVCTTVNKVCASGMKAIMLASQ 476 (814)
Q Consensus 399 ~~~~~eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~~a~~~a~~~Gl~--~~~~~~tv~~~caSg~~Ai~~Aa~ 476 (814)
+.+..+|++.|++.||+++|++|++||.+++++..+....+..+..+...+|++ ....++.++.+|.++..|+..|.+
T Consensus 51 ~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~~ 130 (460)
T 2wya_A 51 QEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAAN 130 (460)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHHH
Confidence 578999999999999999999999999999998876655666777787777643 246789999999999999999999
Q ss_pred HHHcCCCCeEEEEeee
Q psy12877 477 TLSLGHQDVMVAGGME 492 (814)
Q Consensus 477 ~I~sG~~dvvLa~G~E 492 (814)
.|++|..+.++++.++
T Consensus 131 ~i~~g~~~~~lvvv~~ 146 (460)
T 2wya_A 131 WMESSSWDGRYAMVVC 146 (460)
T ss_dssp HHTSTTCCSCEEEEEE
T ss_pred HHHhccccceEEEEEe
Confidence 9999988755544333
No 159
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=98.08 E-value=1e-05 Score=91.86 Aligned_cols=55 Identities=9% Similarity=0.044 Sum_probs=47.7
Q ss_pred CChHHHHHH---HHcCCCCCcceEEecCCCchHHHHHHHHHHHHHCCC--cCEEEEEeecc
Q psy12877 10 GQAPCRQAV---IFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGH--QDVMVAGGMES 65 (814)
Q Consensus 10 ~~~~ar~~a---~~~Gl~~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~--~d~vLa~G~e~ 65 (814)
.+..+..++ ..+|++ .++++.++.+|++|..||..|..+|++|. .+.|||+|+|.
T Consensus 109 ~ps~a~~v~~~L~~lG~~-~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 109 SKSVKTNLMQLFEESGNT-DIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp SSCHHHHHGGGTTTTTCC-CCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred CccHHHHHHHHHhhcCCC-CceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 345777777 445555 79999999999999999999999999999 99999999994
No 160
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=96.52 E-value=0.0012 Score=74.69 Aligned_cols=52 Identities=12% Similarity=0.016 Sum_probs=42.0
Q ss_pred CChHHHHHHHHcCCC--CCcceEEecCCCchHHHHHHHHHHHHHCCCcCEEEEE
Q psy12877 10 GQAPCRQAVIFAGLP--KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAG 61 (814)
Q Consensus 10 ~~~~ar~~a~~~Gl~--~~~p~~tv~~~CaSg~~ai~~A~~~I~sG~~d~vLa~ 61 (814)
.+..+-.+...+|+. ..++++.++.+|+++..|+..|...|++|..+.++++
T Consensus 90 ~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvv 143 (460)
T 2wya_A 90 SKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAM 143 (460)
T ss_dssp SSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEE
T ss_pred CCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEE
Confidence 455777777777642 3678999999999999999999999999988755444
No 161
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=83.17 E-value=1.8 Score=44.04 Aligned_cols=16 Identities=25% Similarity=0.698 Sum_probs=11.9
Q ss_pred cccccEEEeCCCCCCH
Q psy12877 736 SAHYDLVVLDPPFLSD 751 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~ 751 (814)
.++||+|++||||...
T Consensus 117 ~~~fD~Ii~npPy~~~ 132 (259)
T 3lpm_A 117 KERADIVTCNPPYFAT 132 (259)
T ss_dssp TTCEEEEEECCCC---
T ss_pred cCCccEEEECCCCCCC
Confidence 4789999999999765
No 162
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=73.32 E-value=3.8 Score=44.66 Aligned_cols=29 Identities=28% Similarity=0.446 Sum_probs=21.2
Q ss_pred ccccEEEeCCCCCC----------HHHHHHHHHHhhccc
Q psy12877 737 AHYDLVVLDPPFLS----------DECLTKAAVTAKLPL 765 (814)
Q Consensus 737 ~~~d~~~~dppfl~----------~~c~~k~~~~~~~~~ 765 (814)
++||+||+|||+.. +.+..-..++.++|.
T Consensus 288 ~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 326 (396)
T 2as0_A 288 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVK 326 (396)
T ss_dssp CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57999999999976 455555555666665
No 163
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=63.83 E-value=4.6 Score=41.83 Aligned_cols=68 Identities=12% Similarity=0.210 Sum_probs=35.6
Q ss_pred cceeEehhhhhhchHHHHhccC-CCCeEEEEecCcccHHhhhhCCCCCCCcccccccccEEEeCCCCCCHHHHHHHHHHh
Q psy12877 683 SQFWYDENTTQRLSEEAVCRAG-KEGSIALISCPTLYPKIRELAPDAKDVPRELSAHYDLVVLDPPFLSDECLTKAAVTA 761 (814)
Q Consensus 683 sq~~y~e~t~~~l~~~~~~~~~-~~g~iA~~s~ps~~~~~~~~~~~~~~~~~~~~~~~d~~~~dppfl~~~c~~k~~~~~ 761 (814)
....++|..-..+ ..++..- ...++ -|-.--+|..|+.+.+.+ .+||+|++||||-.++=.+++.+++
T Consensus 114 d~~vfvE~~~~a~--~~L~~Nl~~~~~~-~V~~~D~~~~L~~l~~~~--------~~fdLVfiDPPYe~k~~~~~vl~~L 182 (283)
T 2oo3_A 114 DRLYLCELHPTEY--NFLLKLPHFNKKV-YVNHTDGVSKLNALLPPP--------EKRGLIFIDPSYERKEEYKEIPYAI 182 (283)
T ss_dssp SEEEEECCSHHHH--HHHTTSCCTTSCE-EEECSCHHHHHHHHCSCT--------TSCEEEEECCCCCSTTHHHHHHHHH
T ss_pred CeEEEEeCCHHHH--HHHHHHhCcCCcE-EEEeCcHHHHHHHhcCCC--------CCccEEEECCCCCCCcHHHHHHHHH
Confidence 6677777433322 1222211 12233 333445566666544332 2499999999997543344554443
No 164
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=61.53 E-value=4.9 Score=40.46 Aligned_cols=63 Identities=6% Similarity=0.024 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCCh----HHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHH
Q psy12877 404 KLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQA----PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLAS 475 (814)
Q Consensus 404 eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~----~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa 475 (814)
+....+++++|+++|+.++|||.|.++...+.+.+-. .++.++..++ .|.+.|+ .+.++...+
T Consensus 36 ~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRig~~~ak~la~~~~----~Pl~~V~-----~l~a~a~~~ 102 (231)
T 2gel_A 36 QRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGAN----LPMIGVS-----TLATMAQGA 102 (231)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHHTTT----CCEEEEC-----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHHHHHHHHHHHHHcC----CCEEEec-----cHHHHHHHH
Confidence 5678899999999999999999999986543332322 3444444344 4567664 455554433
No 165
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=57.17 E-value=5.1 Score=39.81 Aligned_cols=63 Identities=19% Similarity=0.140 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCC----hHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHH
Q psy12877 404 KLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQ----APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLAS 475 (814)
Q Consensus 404 eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~----~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa 475 (814)
+.....++++|+++|+.++|||.|.++...+.+.+- ..++.++..+++ |.+.| |.+.++...+
T Consensus 37 ~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~i----Pl~gV-----stL~a~a~~~ 103 (213)
T 3r6m_A 37 KKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAEL----PMIGV-----STLAAMAQAS 103 (213)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTC----CEEEE-----EHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHhCC----CEEEE-----cCHHHHHHhh
Confidence 556689999999999999999999998765443332 345566666665 45666 4455655443
No 166
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=56.94 E-value=5.7 Score=39.60 Aligned_cols=54 Identities=13% Similarity=0.096 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHcCCCCcCcceEEEEecccCCCCCh----HHHHHHHHcCCCCCccEEEeC
Q psy12877 404 KLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQA----PCRQAVIFAGLPKSTVCTTVN 461 (814)
Q Consensus 404 eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~~~~----~a~~~a~~~Gl~~~~~~~tv~ 461 (814)
+.....+.++|+++|+.++|||.|.++...+.+.|-. .++.++..+++ |.+.|+
T Consensus 47 e~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlRiG~~~Ak~La~~~~i----Pl~gVs 104 (218)
T 2a6a_A 47 EILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRVGIATVVGLVSPYDI----PVAPLN 104 (218)
T ss_dssp GHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHGGGTC----CEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHHHHHHHHHHHHHHcCC----CEEEeC
Confidence 6667889999999999999999999987644333322 35555555554 567664
No 167
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=55.31 E-value=8.3 Score=36.77 Aligned_cols=26 Identities=27% Similarity=0.443 Sum_probs=17.6
Q ss_pred cccccEEEeCCCCCCH-HHHHHHHHHh
Q psy12877 736 SAHYDLVVLDPPFLSD-ECLTKAAVTA 761 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~-~c~~k~~~~~ 761 (814)
.++||+|++||||... +-+.+.-..+
T Consensus 111 ~~~fD~i~~~~p~~~~~~~~~~~l~~~ 137 (189)
T 3p9n_A 111 TSPVDLVLADPPYNVDSADVDAILAAL 137 (189)
T ss_dssp SSCCSEEEECCCTTSCHHHHHHHHHHH
T ss_pred CCCccEEEECCCCCcchhhHHHHHHHH
Confidence 4679999999999872 3344444433
No 168
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=54.77 E-value=11 Score=38.39 Aligned_cols=16 Identities=25% Similarity=0.814 Sum_probs=11.7
Q ss_pred cccccEEEeCCCCCCH
Q psy12877 736 SAHYDLVVLDPPFLSD 751 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~ 751 (814)
.++||+|+++|||...
T Consensus 113 ~~~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 113 DEHFHHVIMNPPYNDA 128 (260)
T ss_dssp TTCEEEEEECCCC---
T ss_pred CCCcCEEEECCCCcCC
Confidence 3679999999999865
No 169
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=54.51 E-value=10 Score=41.06 Aligned_cols=14 Identities=57% Similarity=1.092 Sum_probs=12.4
Q ss_pred ccccEEEeCCCCCC
Q psy12877 737 AHYDLVVLDPPFLS 750 (814)
Q Consensus 737 ~~~d~~~~dppfl~ 750 (814)
.+||+|++|||+..
T Consensus 278 ~~fD~Ii~dpP~~~ 291 (382)
T 1wxx_A 278 ERFDLVVLDPPAFA 291 (382)
T ss_dssp CCEEEEEECCCCSC
T ss_pred CCeeEEEECCCCCC
Confidence 57999999999965
No 170
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=54.48 E-value=7.3 Score=42.42 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=21.8
Q ss_pred ccccEEEeCCCCCC----------HHHHHHHHHHhhccc
Q psy12877 737 AHYDLVVLDPPFLS----------DECLTKAAVTAKLPL 765 (814)
Q Consensus 737 ~~~d~~~~dppfl~----------~~c~~k~~~~~~~~~ 765 (814)
.+||+||+|||+.. +.+..-..++.++|.
T Consensus 292 ~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 330 (396)
T 3c0k_A 292 EKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLN 330 (396)
T ss_dssp CCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEE
T ss_pred CCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcC
Confidence 57999999999976 556555666667765
No 171
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=54.01 E-value=19 Score=38.61 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=22.4
Q ss_pred CcccccccccEEEeCCCCCCHHHHHHHHHHhhccc
Q psy12877 731 VPRELSAHYDLVVLDPPFLSDECLTKAAVTAKLPL 765 (814)
Q Consensus 731 ~~~~~~~~~d~~~~dppfl~~~c~~k~~~~~~~~~ 765 (814)
+|..+.++||+||+||||-......-..+..+.|.
T Consensus 234 l~~~~~~~fD~Vi~~~p~~~~~~~~~l~~~~~~Lk 268 (373)
T 2qm3_A 234 LPDYALHKFDTFITDPPETLEAIRAFVGRGIATLK 268 (373)
T ss_dssp CCTTTSSCBSEEEECCCSSHHHHHHHHHHHHHTBC
T ss_pred chhhccCCccEEEECCCCchHHHHHHHHHHHHHcc
Confidence 55545678999999999976653222233345554
No 172
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=53.49 E-value=14 Score=37.78 Aligned_cols=16 Identities=19% Similarity=0.872 Sum_probs=13.7
Q ss_pred cccccEEEeCCCCCCH
Q psy12877 736 SAHYDLVVLDPPFLSD 751 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~ 751 (814)
.++||+|+++|||...
T Consensus 174 ~~~fD~Iv~npPy~~~ 189 (276)
T 2b3t_A 174 GQQFAMIVSNPPYIDE 189 (276)
T ss_dssp TCCEEEEEECCCCBCT
T ss_pred cCCccEEEECCCCCCc
Confidence 4679999999999864
No 173
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=52.58 E-value=6.3 Score=44.03 Aligned_cols=22 Identities=18% Similarity=0.430 Sum_probs=16.2
Q ss_pred CCCcccccccccEEEeCCCCCC
Q psy12877 729 KDVPRELSAHYDLVVLDPPFLS 750 (814)
Q Consensus 729 ~~~~~~~~~~~d~~~~dppfl~ 750 (814)
.++++.+.++||+|++|||+-.
T Consensus 161 ~~l~~~~~~~FD~Il~D~PcSg 182 (464)
T 3m6w_A 161 RALAEAFGTYFHRVLLDAPCSG 182 (464)
T ss_dssp HHHHHHHCSCEEEEEEECCCCC
T ss_pred HHhhhhccccCCEEEECCCcCC
Confidence 3444445678999999999854
No 174
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=52.32 E-value=8.6 Score=41.92 Aligned_cols=15 Identities=40% Similarity=0.736 Sum_probs=12.5
Q ss_pred cccccEEEeCCCCCC
Q psy12877 736 SAHYDLVVLDPPFLS 750 (814)
Q Consensus 736 ~~~~d~~~~dppfl~ 750 (814)
.++||+||+|||+++
T Consensus 278 ~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 278 EGPFHHVLLDPPTLV 292 (393)
T ss_dssp CCCEEEEEECCCCCC
T ss_pred cCCCCEEEECCCcCC
Confidence 345999999999866
No 175
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=51.35 E-value=5.1 Score=40.93 Aligned_cols=15 Identities=33% Similarity=0.665 Sum_probs=13.1
Q ss_pred ccccEEEeCCCCCCH
Q psy12877 737 AHYDLVVLDPPFLSD 751 (814)
Q Consensus 737 ~~~d~~~~dppfl~~ 751 (814)
++||+|++||||-..
T Consensus 22 ~~vdlI~~DPPY~~~ 36 (260)
T 1g60_A 22 KSVQLAVIDPPYNLS 36 (260)
T ss_dssp TCEEEEEECCCCSSC
T ss_pred cccCEEEECCCCCCC
Confidence 589999999999754
No 176
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=51.28 E-value=34 Score=33.32 Aligned_cols=14 Identities=21% Similarity=0.795 Sum_probs=12.2
Q ss_pred ccccEEEeCCCCCC
Q psy12877 737 AHYDLVVLDPPFLS 750 (814)
Q Consensus 737 ~~~d~~~~dppfl~ 750 (814)
++||+|++||||..
T Consensus 122 ~~fD~I~~npp~~~ 135 (230)
T 3evz_A 122 GTFDVIFSAPPYYD 135 (230)
T ss_dssp SCEEEEEECCCCC-
T ss_pred CceeEEEECCCCcC
Confidence 78999999999965
No 177
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=50.46 E-value=9.1 Score=40.46 Aligned_cols=16 Identities=31% Similarity=0.580 Sum_probs=13.6
Q ss_pred cccccEEEeCCCCCCH
Q psy12877 736 SAHYDLVVLDPPFLSD 751 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~ 751 (814)
.++||+|++||||-..
T Consensus 31 ~~svDlI~tDPPY~~~ 46 (323)
T 1boo_A 31 EESISLVMTSPPFALQ 46 (323)
T ss_dssp SSCEEEEEECCCCSSS
T ss_pred CCCeeEEEECCCCCCC
Confidence 3689999999999664
No 178
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=50.16 E-value=14 Score=35.40 Aligned_cols=18 Identities=17% Similarity=0.525 Sum_probs=13.4
Q ss_pred cccccEEEeCCCCCCHHH
Q psy12877 736 SAHYDLVVLDPPFLSDEC 753 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~~c 753 (814)
.++||+|++||||.....
T Consensus 99 ~~~fD~i~~npp~~~~~~ 116 (215)
T 4dzr_A 99 GRPWHAIVSNPPYIPTGE 116 (215)
T ss_dssp TCCBSEEEECCCCCC---
T ss_pred cCcccEEEECCCCCCCcc
Confidence 378999999999976554
No 179
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=48.72 E-value=11 Score=39.00 Aligned_cols=16 Identities=13% Similarity=0.814 Sum_probs=13.3
Q ss_pred ccc---cEEEeCCCCCCHH
Q psy12877 737 AHY---DLVVLDPPFLSDE 752 (814)
Q Consensus 737 ~~~---d~~~~dppfl~~~ 752 (814)
++| |+|+.+|||....
T Consensus 188 ~~f~~~D~IvsnPPyi~~~ 206 (284)
T 1nv8_A 188 EKFASIEMILSNPPYVKSS 206 (284)
T ss_dssp GGTTTCCEEEECCCCBCGG
T ss_pred cccCCCCEEEEcCCCCCcc
Confidence 468 9999999998653
No 180
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=47.26 E-value=13 Score=38.92 Aligned_cols=14 Identities=21% Similarity=0.430 Sum_probs=11.8
Q ss_pred ccccEEEeCCCCCC
Q psy12877 737 AHYDLVVLDPPFLS 750 (814)
Q Consensus 737 ~~~d~~~~dppfl~ 750 (814)
.+||+|++|||+-.
T Consensus 173 ~~fD~Vl~D~PcSg 186 (309)
T 2b9e_A 173 HEVHYILLDPSCSG 186 (309)
T ss_dssp TTEEEEEECCCCCC
T ss_pred CCCCEEEEcCCcCC
Confidence 57999999999843
No 181
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=46.34 E-value=7.2 Score=40.65 Aligned_cols=14 Identities=43% Similarity=0.776 Sum_probs=12.6
Q ss_pred ccccEEEeCCCCCC
Q psy12877 737 AHYDLVVLDPPFLS 750 (814)
Q Consensus 737 ~~~d~~~~dppfl~ 750 (814)
++||+|++||||.+
T Consensus 39 ~s~DlIvtdPPY~~ 52 (297)
T 2zig_A 39 ASVHLVVTSPPYWT 52 (297)
T ss_dssp TCEEEEEECCCCCC
T ss_pred CceeEEEECCCCCC
Confidence 68999999999974
No 182
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=46.05 E-value=11 Score=39.79 Aligned_cols=15 Identities=27% Similarity=0.560 Sum_probs=13.0
Q ss_pred ccccEEEeCCCCCCH
Q psy12877 737 AHYDLVVLDPPFLSD 751 (814)
Q Consensus 737 ~~~d~~~~dppfl~~ 751 (814)
++||+|++||||-..
T Consensus 57 ~svDlI~tDPPY~~~ 71 (319)
T 1eg2_A 57 DSVQLIICDPPYNIM 71 (319)
T ss_dssp TCEEEEEECCCSBCC
T ss_pred CCcCEEEECCCCCCC
Confidence 579999999999764
No 183
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=45.15 E-value=25 Score=33.68 Aligned_cols=14 Identities=43% Similarity=0.942 Sum_probs=12.1
Q ss_pred ccccEEEeCCCCCC
Q psy12877 737 AHYDLVVLDPPFLS 750 (814)
Q Consensus 737 ~~~d~~~~dppfl~ 750 (814)
++||+|++||||..
T Consensus 111 ~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 111 SRVDIVIMNPPFGS 124 (207)
T ss_dssp CCCSEEEECCCCSS
T ss_pred CCCCEEEEcCCCcc
Confidence 47999999999864
No 184
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=43.75 E-value=19 Score=41.09 Aligned_cols=28 Identities=21% Similarity=0.215 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEecCCC
Q psy12877 239 APAFAIPTLLKNGGVAKQDVALWEINEA 266 (814)
Q Consensus 239 ~~~~a~~~al~~aGl~~~DID~~e~~d~ 266 (814)
-|..|++.+|+++|++++|||.|-.+..
T Consensus 51 fP~~AI~~cL~~AGi~~~DID~Va~~~~ 78 (576)
T 3ven_A 51 APVQAAAFCLAQAGLTVDDLDAVAFGWD 78 (576)
T ss_dssp CCHHHHHHHHHHHTCCGGGCSEEEESSC
T ss_pred CCHHHHHHHHHHcCCCHHHCcEEEEECC
Confidence 4688999999999999999999987765
No 185
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=43.28 E-value=24 Score=38.97 Aligned_cols=23 Identities=30% Similarity=0.473 Sum_probs=16.5
Q ss_pred CCCccccc-ccccEEEeCCCCCCH
Q psy12877 729 KDVPRELS-AHYDLVVLDPPFLSD 751 (814)
Q Consensus 729 ~~~~~~~~-~~~d~~~~dppfl~~ 751 (814)
.++|..+. ++||+|++|||+-..
T Consensus 320 ~~~~~~~~~~~fD~Vl~D~Pcsg~ 343 (450)
T 2yxl_A 320 RKAPEIIGEEVADKVLLDAPCTSS 343 (450)
T ss_dssp TCCSSSSCSSCEEEEEEECCCCCG
T ss_pred hhcchhhccCCCCEEEEcCCCCCC
Confidence 34444455 679999999998543
No 186
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=43.03 E-value=4.6 Score=45.07 Aligned_cols=21 Identities=24% Similarity=0.509 Sum_probs=15.4
Q ss_pred CCCcccccccccEEEeCCCCC
Q psy12877 729 KDVPRELSAHYDLVVLDPPFL 749 (814)
Q Consensus 729 ~~~~~~~~~~~d~~~~dppfl 749 (814)
.+++..+.++||+|++|||.-
T Consensus 166 ~~l~~~~~~~FD~Il~DaPCS 186 (456)
T 3m4x_A 166 AELVPHFSGFFDRIVVDAPCS 186 (456)
T ss_dssp HHHHHHHTTCEEEEEEECCCC
T ss_pred HHhhhhccccCCEEEECCCCC
Confidence 344444567899999999963
No 187
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=41.97 E-value=14 Score=41.39 Aligned_cols=22 Identities=18% Similarity=0.398 Sum_probs=16.0
Q ss_pred CCCcccccccccEEEeCCCCCC
Q psy12877 729 KDVPRELSAHYDLVVLDPPFLS 750 (814)
Q Consensus 729 ~~~~~~~~~~~d~~~~dppfl~ 750 (814)
.+++..+.++||+|++|||+-.
T Consensus 178 ~~~~~~~~~~fD~Il~D~PcSg 199 (479)
T 2frx_A 178 RVFGAAVPEMFDAILLDAPCSG 199 (479)
T ss_dssp TTHHHHSTTCEEEEEEECCCCC
T ss_pred HHhhhhccccCCEEEECCCcCC
Confidence 3444445578999999999853
No 188
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=40.99 E-value=9.7 Score=44.93 Aligned_cols=74 Identities=23% Similarity=0.308 Sum_probs=0.0
Q ss_pred ccccccccEEEeCCCCCC------------HHHHHHHHHHhhccc--cceeeeehHHHHHHHHhhcCcceeeeeecccCC
Q psy12877 733 RELSAHYDLVVLDPPFLS------------DECLTKAAVTAKLPL--FVSLTVSGEIMQDLALRLLGVKKCKFIPRHKNN 798 (814)
Q Consensus 733 ~~~~~~~d~~~~dppfl~------------~~c~~k~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~f~p~h~~~ 798 (814)
+...++||+||+|||+.+ ++...-.....++|. ..+++++...--.+-.+.+.-.-..++.-+...
T Consensus 604 ~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~~~~i~~~~ 683 (703)
T 3v97_A 604 REANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT 683 (703)
T ss_dssp HHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEEEEECTTTT
T ss_pred HhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCceeeeeecc
Q ss_pred Cccce-------eee
Q psy12877 799 LANDF-------ACF 806 (814)
Q Consensus 799 l~~~f-------~~~ 806 (814)
+.-+| +||
T Consensus 684 lp~df~~~~~ih~~w 698 (703)
T 3v97_A 684 LSQDFARNRQIHNCW 698 (703)
T ss_dssp CCGGGTTCSSCCEEE
T ss_pred CCCCCCCCCcceEEE
No 189
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=39.01 E-value=24 Score=37.81 Aligned_cols=13 Identities=23% Similarity=0.501 Sum_probs=11.4
Q ss_pred ccccEEEeCCCCC
Q psy12877 737 AHYDLVVLDPPFL 749 (814)
Q Consensus 737 ~~~d~~~~dppfl 749 (814)
.+||+||+|||+.
T Consensus 294 ~~fD~Vv~dPPr~ 306 (369)
T 3bt7_A 294 YQCETIFVDPPRS 306 (369)
T ss_dssp CCEEEEEECCCTT
T ss_pred CCCCEEEECcCcc
Confidence 3799999999994
No 190
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=38.84 E-value=19 Score=39.05 Aligned_cols=66 Identities=14% Similarity=0.132 Sum_probs=35.4
Q ss_pred ccccEEEeCCCCC----CHHHHH----HHHHHhhcc-ccceeeeehHHHHHHHHhhcCcceeeeeecccCCCccceee
Q psy12877 737 AHYDLVVLDPPFL----SDECLT----KAAVTAKLP-LFVSLTVSGEIMQDLALRLLGVKKCKFIPRHKNNLANDFAC 805 (814)
Q Consensus 737 ~~~d~~~~dppfl----~~~c~~----k~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~f~p~h~~~l~~~f~~ 805 (814)
.+||+||+||||- +++=.. +..+..|-+ ..+..++|+. +-+.+.+|++...=+|-...+|--.|+-
T Consensus 299 ~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~---~~l~~~~g~~~~~~~~l~nG~l~~~~~~ 373 (384)
T 3ldg_A 299 KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTND---TDFEQKFGRKADKKRKLYNGSLKVDLYQ 373 (384)
T ss_dssp CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC---TTHHHHHTSCCSEEEEEEETTEEEEEEE
T ss_pred CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC---HHHHHHhCCCccceeEEecCCEEEEEEE
Confidence 3699999999994 222222 223333321 1245556663 2245667877765555444455444433
No 191
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=37.02 E-value=18 Score=33.72 Aligned_cols=14 Identities=50% Similarity=1.134 Sum_probs=11.7
Q ss_pred cccccEEEeCCCCC
Q psy12877 736 SAHYDLVVLDPPFL 749 (814)
Q Consensus 736 ~~~~d~~~~dppfl 749 (814)
.++||+|++||||.
T Consensus 98 ~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 98 TGRFDLVFLDPPYA 111 (177)
T ss_dssp CSCEEEEEECCSSH
T ss_pred cCCCCEEEECCCCC
Confidence 35699999999983
No 192
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=36.70 E-value=27 Score=37.87 Aligned_cols=34 Identities=21% Similarity=0.229 Sum_probs=22.5
Q ss_pred hHHHHHHHHcCCCCCccEEEeCCCCCcHHHHHHHHH
Q psy12877 440 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLAS 475 (814)
Q Consensus 440 ~~a~~~a~~~Gl~~~~~~~tv~~~caSg~~Ai~~Aa 475 (814)
+++..+...++.....+ -++-+|+||.-+|..|.
T Consensus 188 ~lAa~ll~l~~~~~~~~--vlDp~CGSGt~~ieaa~ 221 (393)
T 3k0b_A 188 TMAAALVLLTSWHPDRP--FYDPVCGSGTIPIEAAL 221 (393)
T ss_dssp HHHHHHHHHSCCCTTSC--EEETTCTTSHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCe--EEEcCCCCCHHHHHHHH
Confidence 35666667778764433 46668999988776553
No 193
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=36.14 E-value=24 Score=34.02 Aligned_cols=15 Identities=47% Similarity=0.908 Sum_probs=12.5
Q ss_pred ccc-ccEEEeCCCCCC
Q psy12877 736 SAH-YDLVVLDPPFLS 750 (814)
Q Consensus 736 ~~~-~d~~~~dppfl~ 750 (814)
.++ ||+|++||||-.
T Consensus 122 ~~~~fD~I~~~~~~~~ 137 (201)
T 2ift_A 122 NQPHFDVVFLDPPFHF 137 (201)
T ss_dssp SSCCEEEEEECCCSSS
T ss_pred cCCCCCEEEECCCCCC
Confidence 367 999999999863
No 194
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=35.86 E-value=52 Score=35.93 Aligned_cols=22 Identities=18% Similarity=0.348 Sum_probs=15.8
Q ss_pred CCCccccc-ccccEEEeCCCCCC
Q psy12877 729 KDVPRELS-AHYDLVVLDPPFLS 750 (814)
Q Consensus 729 ~~~~~~~~-~~~d~~~~dppfl~ 750 (814)
.++++.+. ++||+|++|||+-.
T Consensus 305 ~~~~~~~~~~~fD~Vl~D~Pcsg 327 (429)
T 1sqg_A 305 RYPSQWCGEQQFDRILLDAPCSA 327 (429)
T ss_dssp TCTHHHHTTCCEEEEEEECCCCC
T ss_pred hhchhhcccCCCCEEEEeCCCCc
Confidence 34444444 57999999999865
No 195
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=34.55 E-value=27 Score=31.98 Aligned_cols=13 Identities=15% Similarity=0.751 Sum_probs=11.5
Q ss_pred ccccEEEeCCCCC
Q psy12877 737 AHYDLVVLDPPFL 749 (814)
Q Consensus 737 ~~~d~~~~dppfl 749 (814)
.+||+|++||||.
T Consensus 109 ~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 109 ERFTVAFMAPPYA 121 (171)
T ss_dssp CCEEEEEECCCTT
T ss_pred CceEEEEECCCCc
Confidence 3799999999995
No 196
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=34.49 E-value=24 Score=38.22 Aligned_cols=66 Identities=11% Similarity=0.058 Sum_probs=33.5
Q ss_pred ccccEEEeCCCCCCHHHH--------HHHHHHhhcc-ccceeeeehHHHHHHHHhhcCcceeeeeecccCCCccceee
Q psy12877 737 AHYDLVVLDPPFLSDECL--------TKAAVTAKLP-LFVSLTVSGEIMQDLALRLLGVKKCKFIPRHKNNLANDFAC 805 (814)
Q Consensus 737 ~~~d~~~~dppfl~~~c~--------~k~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~f~p~h~~~l~~~f~~ 805 (814)
.+||+||+||||-.+--. .+.....|-+ ...+.++|+. +.+.+.+|++...=++-...+|--.|+.
T Consensus 300 ~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~---~~l~~~~g~~~~~~~~l~nG~l~~~~~~ 374 (385)
T 3ldu_A 300 DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY---EDFEYEFGQKADKKRKLYNGMLKTNFFQ 374 (385)
T ss_dssp CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC---TTHHHHHTSCCSEEEEEEETTEEEEEEE
T ss_pred CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC---HHHHHhhCCCcccceEEecCCEEEEEEE
Confidence 479999999999743221 1122222221 1234455653 2244566776654444444455444433
No 197
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=33.13 E-value=16 Score=37.25 Aligned_cols=14 Identities=36% Similarity=0.510 Sum_probs=12.1
Q ss_pred cccEEEeCCCCCCH
Q psy12877 738 HYDLVVLDPPFLSD 751 (814)
Q Consensus 738 ~~d~~~~dppfl~~ 751 (814)
+||+|++||||-..
T Consensus 164 ~fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 164 RPQVVYLDPMFPHK 177 (258)
T ss_dssp CCSEEEECCCCCCC
T ss_pred cCCEEEEcCCCCCc
Confidence 59999999999654
No 198
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=32.98 E-value=25 Score=35.88 Aligned_cols=16 Identities=25% Similarity=0.588 Sum_probs=12.3
Q ss_pred cccccEEEeCCCCCCH
Q psy12877 736 SAHYDLVVLDPPFLSD 751 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~ 751 (814)
.++||+|++|||+-..
T Consensus 154 ~~~fD~Vl~d~Pcs~~ 169 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGN 169 (274)
T ss_dssp TCCEEEEEEEECCC--
T ss_pred cccCCEEEEcCCCCCC
Confidence 4679999999999653
No 199
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=31.96 E-value=22 Score=33.83 Aligned_cols=21 Identities=10% Similarity=0.300 Sum_probs=15.5
Q ss_pred CCcccccccccEEEeCCCCCC
Q psy12877 730 DVPRELSAHYDLVVLDPPFLS 750 (814)
Q Consensus 730 ~~~~~~~~~~d~~~~dppfl~ 750 (814)
++++.+.++||+|++||||+.
T Consensus 85 ~~~~~~~~~fD~v~~~~~~~~ 105 (197)
T 3eey_A 85 NMDKYIDCPVKAVMFNLGYLP 105 (197)
T ss_dssp GGGGTCCSCEEEEEEEESBCT
T ss_pred HHhhhccCCceEEEEcCCccc
Confidence 344444578999999999954
No 200
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=31.47 E-value=31 Score=36.43 Aligned_cols=14 Identities=36% Similarity=0.921 Sum_probs=11.7
Q ss_pred ccccEEEeCCCCCC
Q psy12877 737 AHYDLVVLDPPFLS 750 (814)
Q Consensus 737 ~~~d~~~~dppfl~ 750 (814)
.+||+||+|||+..
T Consensus 224 ~~fD~Ii~dPP~~~ 237 (332)
T 2igt_A 224 STYDIILTDPPKFG 237 (332)
T ss_dssp CCBSEEEECCCSEE
T ss_pred CCceEEEECCcccc
Confidence 57999999999643
No 201
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=31.26 E-value=22 Score=38.45 Aligned_cols=25 Identities=24% Similarity=0.200 Sum_probs=18.1
Q ss_pred cccccEEEeCCCCCCHHHHHHHHHH
Q psy12877 736 SAHYDLVVLDPPFLSDECLTKAAVT 760 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~~c~~k~~~~ 760 (814)
+.+||+|++|||+..++-+..+...
T Consensus 129 ~~~fD~I~lDP~~~~~~~l~~a~~~ 153 (378)
T 2dul_A 129 HRYFHFIDLDPFGSPMEFLDTALRS 153 (378)
T ss_dssp TTCEEEEEECCSSCCHHHHHHHHHH
T ss_pred cCCCCEEEeCCCCCHHHHHHHHHHh
Confidence 4579999999998766666554433
No 202
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=31.09 E-value=74 Score=29.56 Aligned_cols=16 Identities=6% Similarity=0.210 Sum_probs=10.8
Q ss_pred cccccEEEeCCCCCCH
Q psy12877 736 SAHYDLVVLDPPFLSD 751 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~ 751 (814)
.++||+|+.++||+..
T Consensus 87 ~~~fD~v~~~~~~~~~ 102 (185)
T 3mti_A 87 REPIRAAIFNLGYLPS 102 (185)
T ss_dssp CSCEEEEEEEEC----
T ss_pred cCCcCEEEEeCCCCCC
Confidence 5679999999999865
No 203
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=30.75 E-value=45 Score=31.89 Aligned_cols=71 Identities=11% Similarity=0.006 Sum_probs=33.7
Q ss_pred ccccEEEeCCCCCCH-----------HHHHHHH-HHhhcccc--ceee--eehHHHHHHHHhh--cCcceeeeeecccCC
Q psy12877 737 AHYDLVVLDPPFLSD-----------ECLTKAA-VTAKLPLF--VSLT--VSGEIMQDLALRL--LGVKKCKFIPRHKNN 798 (814)
Q Consensus 737 ~~~d~~~~dppfl~~-----------~c~~k~~-~~~~~~~~--~~~~--~~g~~~~~~~~~~--~~~~~~~f~p~h~~~ 798 (814)
++||+|+.|+|.-.. +.++... .+.++|.. .+++ ..|+...++.+.+ .=-+...++|...+.
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~F~~v~~~kP~asR~ 169 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKNFSSYKISKPPASRG 169 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGGEEEEEEECC-----
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHhcCEEEEECCCCccC
Confidence 489999999875321 1112222 22334431 2222 2355444544433 113455788999988
Q ss_pred Cccceeeee
Q psy12877 799 LANDFACFV 807 (814)
Q Consensus 799 l~~~f~~~~ 807 (814)
=+.|++.-+
T Consensus 170 ~s~E~y~v~ 178 (191)
T 3dou_A 170 SSSEIYIMF 178 (191)
T ss_dssp -CCEEEEEE
T ss_pred CCceEEEEE
Confidence 899988765
No 204
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=30.10 E-value=24 Score=32.96 Aligned_cols=13 Identities=54% Similarity=1.198 Sum_probs=11.7
Q ss_pred ccccEEEeCCCCC
Q psy12877 737 AHYDLVVLDPPFL 749 (814)
Q Consensus 737 ~~~d~~~~dppfl 749 (814)
++||+|++||||.
T Consensus 115 ~~fD~i~~~~~~~ 127 (187)
T 2fhp_A 115 LQFDLVLLDPPYA 127 (187)
T ss_dssp CCEEEEEECCCGG
T ss_pred CCCCEEEECCCCC
Confidence 5799999999986
No 205
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=28.33 E-value=55 Score=34.41 Aligned_cols=55 Identities=15% Similarity=0.116 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC----CChHHHHHHHHcCCCCCccEEEeCC
Q psy12877 404 KLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL----GQAPCRQAVIFAGLPKSTVCTTVNK 462 (814)
Q Consensus 404 eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~----~~~~a~~~a~~~Gl~~~~~~~tv~~ 462 (814)
+....+++++|+++|++++|||.|.++...+... +...++.++...++ |...|+.
T Consensus 49 ~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~~~~lrvg~~~ak~la~~~~~----pl~~v~h 107 (330)
T 2ivn_A 49 RLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRK----PIVGVNH 107 (330)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCEEEEEEESSCHHHHHHHHHHHHHHHHHTTC----CEEEEEH
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECCCCchHHHHHHHHHHHHHHHHcCC----CEEeeCc
Confidence 4566799999999999999999998764322111 11235555555554 4566643
No 206
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=27.93 E-value=96 Score=28.64 Aligned_cols=14 Identities=36% Similarity=0.921 Sum_probs=12.8
Q ss_pred ccccEEEeCCCCCC
Q psy12877 737 AHYDLVVLDPPFLS 750 (814)
Q Consensus 737 ~~~d~~~~dppfl~ 750 (814)
++||+|+++|||..
T Consensus 77 ~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 77 ESVDVVVFNPPYVP 90 (170)
T ss_dssp GGCSEEEECCCCBT
T ss_pred CCCCEEEECCCCcc
Confidence 78999999999984
No 207
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=27.81 E-value=79 Score=33.30 Aligned_cols=14 Identities=21% Similarity=0.396 Sum_probs=11.5
Q ss_pred ccccEEEeCCCCCC
Q psy12877 737 AHYDLVVLDPPFLS 750 (814)
Q Consensus 737 ~~~d~~~~dppfl~ 750 (814)
.+||+||+||||-.
T Consensus 271 ~~~D~Ii~npPyg~ 284 (354)
T 3tma_A 271 PEVDRILANPPHGL 284 (354)
T ss_dssp CCCSEEEECCCSCC
T ss_pred CCCCEEEECCCCcC
Confidence 34899999999953
No 208
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=27.57 E-value=39 Score=36.46 Aligned_cols=14 Identities=36% Similarity=1.023 Sum_probs=11.8
Q ss_pred ccccEEEeCCCCCC
Q psy12877 737 AHYDLVVLDPPFLS 750 (814)
Q Consensus 737 ~~~d~~~~dppfl~ 750 (814)
.+||+||+|||+.+
T Consensus 284 ~~fD~Ii~DPP~~~ 297 (385)
T 2b78_A 284 LTYDIIIIDPPSFA 297 (385)
T ss_dssp CCEEEEEECCCCC-
T ss_pred CCccEEEECCCCCC
Confidence 47999999999964
No 209
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=27.55 E-value=34 Score=34.96 Aligned_cols=24 Identities=17% Similarity=0.138 Sum_probs=19.1
Q ss_pred cccccEEEeCCCCCCHHHHHHHHH
Q psy12877 736 SAHYDLVVLDPPFLSDECLTKAAV 759 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~~c~~k~~~ 759 (814)
.++||+|++|||+-.++.+.+...
T Consensus 190 ~~~fD~Vi~~~p~~~~~~l~~~~~ 213 (278)
T 2frn_A 190 ENIADRILMGYVVRTHEFIPKALS 213 (278)
T ss_dssp CSCEEEEEECCCSSGGGGHHHHHH
T ss_pred cCCccEEEECCchhHHHHHHHHHH
Confidence 568999999999988777765443
No 210
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=27.54 E-value=23 Score=37.61 Aligned_cols=54 Identities=19% Similarity=0.223 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHcCCCCcCcceEEEEecccCCC----CChHHHHHHHHcCCCCCccEEEeC
Q psy12877 404 KLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL----GQAPCRQAVIFAGLPKSTVCTTVN 461 (814)
Q Consensus 404 eLa~~A~~~AL~dAGl~~~dID~vivG~~~~~~~----~~~~a~~~a~~~Gl~~~~~~~tv~ 461 (814)
+....+++++|+++|++++|||.|.++...+... +...++.++..++.| .+.|+
T Consensus 54 ~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrvg~~~ak~La~~~~~P----l~~v~ 111 (334)
T 3eno_A 54 EVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTATAARTISVLTGKP----IIGVN 111 (334)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHHHHHHHHHHHHHHTCC----CEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHHHHHHHHHHhhccCCC----eEEec
Confidence 4667899999999999999999998875422111 112345555555654 45554
No 211
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=27.02 E-value=39 Score=32.48 Aligned_cols=16 Identities=31% Similarity=0.679 Sum_probs=12.9
Q ss_pred cccccEEEeCCCCCCH
Q psy12877 736 SAHYDLVVLDPPFLSD 751 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~ 751 (814)
.++||+|++||||-.+
T Consensus 120 ~~~fD~V~~~~p~~~~ 135 (202)
T 2fpo_A 120 GTPHNIVFVDPPFRRG 135 (202)
T ss_dssp CCCEEEEEECCSSSTT
T ss_pred CCCCCEEEECCCCCCC
Confidence 3579999999997643
No 212
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=26.82 E-value=48 Score=36.34 Aligned_cols=44 Identities=18% Similarity=0.159 Sum_probs=23.1
Q ss_pred cccEEEeCCCCCCHHHHHHHHHHhhccc-cce--eeeehHHHHHHHHhh
Q psy12877 738 HYDLVVLDPPFLSDECLTKAAVTAKLPL-FVS--LTVSGEIMQDLALRL 783 (814)
Q Consensus 738 ~~d~~~~dppfl~~~c~~k~~~~~~~~~-~~~--~~~~g~~~~~~~~~~ 783 (814)
+||+||+|||+- .+..+..+.++.|. ..+ +.|.-..+..-+..+
T Consensus 353 ~fD~Vv~dPPr~--g~~~~~~~~l~~l~p~givyvsc~p~tlarDl~~l 399 (425)
T 2jjq_A 353 GFDTVIVDPPRA--GLHPRLVKRLNREKPGVIVYVSCNPETFARDVKML 399 (425)
T ss_dssp TCSEEEECCCTT--CSCHHHHHHHHHHCCSEEEEEESCHHHHHHHHHHS
T ss_pred CCCEEEEcCCcc--chHHHHHHHHHhcCCCcEEEEECChHHHHhHHhhC
Confidence 799999999973 23333444444343 223 344434443334444
No 213
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=26.75 E-value=40 Score=34.75 Aligned_cols=18 Identities=50% Similarity=0.894 Sum_probs=14.0
Q ss_pred ccccccccEEEeC-CCCCC
Q psy12877 733 RELSAHYDLVVLD-PPFLS 750 (814)
Q Consensus 733 ~~~~~~~d~~~~d-ppfl~ 750 (814)
++++..||+||+| ||.+.
T Consensus 196 ~~l~~~yD~VIIDtpp~~~ 214 (286)
T 3la6_A 196 NWASKNYDLVLIDTPPILA 214 (286)
T ss_dssp HHHHHHCSEEEEECCCTTT
T ss_pred HHHHhCCCEEEEcCCCCcc
Confidence 4567789999999 67664
No 214
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=26.64 E-value=34 Score=36.92 Aligned_cols=38 Identities=21% Similarity=0.182 Sum_probs=27.6
Q ss_pred ccccEEEeC-CCCCCHHHHHHHHHHhhccccceeeeehHHHHHHHHhhcCccee
Q psy12877 737 AHYDLVVLD-PPFLSDECLTKAAVTAKLPLFVSLTVSGEIMQDLALRLLGVKKC 789 (814)
Q Consensus 737 ~~~d~~~~d-ppfl~~~c~~k~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 789 (814)
+.||+||+| || +..|.|+|.-+ +++..++++++.++..
T Consensus 123 ~~yD~VIvDtpP---------tg~tLrlL~lP------~~l~~~l~~l~~~~~~ 161 (374)
T 3igf_A 123 GKYDTIVYDGTG---------DAFTLRMLGLP------ESLSWYVRRFRQLFVN 161 (374)
T ss_dssp TCCSEEEEECCC---------SHHHHHHHTHH------HHHHHHHHHTTSCC--
T ss_pred cCCCEEEEeCCC---------ChHHhhhhhhh------HHHHHHHHHHHHHHhh
Confidence 469999999 66 48899988855 6777778777554433
No 215
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=25.94 E-value=26 Score=33.45 Aligned_cols=15 Identities=40% Similarity=0.775 Sum_probs=11.3
Q ss_pred ccccEEEeCCCCCCH
Q psy12877 737 AHYDLVVLDPPFLSD 751 (814)
Q Consensus 737 ~~~d~~~~dppfl~~ 751 (814)
++||+|++||||-.-
T Consensus 109 ~~~D~v~~~~p~~~~ 123 (200)
T 1ne2_A 109 GKYDTWIMNPPFGSV 123 (200)
T ss_dssp CCEEEEEECCCC---
T ss_pred CCeeEEEECCCchhc
Confidence 689999999998643
No 216
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=25.06 E-value=33 Score=35.29 Aligned_cols=23 Identities=17% Similarity=0.158 Sum_probs=19.5
Q ss_pred cccccEEEeCCCCCCHHHHHHHH
Q psy12877 736 SAHYDLVVLDPPFLSDECLTKAA 758 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~~c~~k~~ 758 (814)
+++||+||.|||+-+++-+.++-
T Consensus 190 ~~~~D~Vi~~~p~~~~~~l~~a~ 212 (278)
T 3k6r_A 190 ENIADRILMGYVVRTHEFIPKAL 212 (278)
T ss_dssp CSCEEEEEECCCSSGGGGHHHHH
T ss_pred ccCCCEEEECCCCcHHHHHHHHH
Confidence 36799999999999999887643
No 217
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=23.08 E-value=56 Score=29.04 Aligned_cols=58 Identities=14% Similarity=0.037 Sum_probs=32.1
Q ss_pred cccccEEEeCCCCCCHHHHHHHHHHhhc----cccceeeeehHHHHHHHHhhcCcceeeeeec
Q psy12877 736 SAHYDLVVLDPPFLSDECLTKAAVTAKL----PLFVSLTVSGEIMQDLALRLLGVKKCKFIPR 794 (814)
Q Consensus 736 ~~~~d~~~~dppfl~~~c~~k~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~f~p~ 794 (814)
+..+|+||+|--.-..+.++ ....+|- ...++|++|+..-.+.+.+.+......|.++
T Consensus 57 ~~~~dliilD~~l~~~~g~~-~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~K 118 (152)
T 3heb_A 57 AGRAQLVLLDLNLPDMTGID-ILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITK 118 (152)
T ss_dssp TTCBEEEEECSBCSSSBHHH-HHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEEC
T ss_pred cCCCCEEEEeCCCCCCcHHH-HHHHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeC
Confidence 45699999996544434333 2223332 2346888888766666655543333344433
No 218
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=22.97 E-value=2.6e+02 Score=27.26 Aligned_cols=118 Identities=11% Similarity=0.086 Sum_probs=63.4
Q ss_pred HHHHHHHhcCCCcceeEehhhhhhchHHHHhccCCCCeEEEEe----cCcccHHhhhhCCC----------CCCCc----
Q psy12877 671 AIPTLLKNGGQLSQFWYDENTTQRLSEEAVCRAGKEGSIALIS----CPTLYPKIRELAPD----------AKDVP---- 732 (814)
Q Consensus 671 A~~~~~~~~~~~sq~~y~e~t~~~l~~~~~~~~~~~g~iA~~s----~ps~~~~~~~~~~~----------~~~~~---- 732 (814)
++.++|++.|+..++.-.+.+.+.|.+.+... -.|.+|-++. -+.+-..|++..-+ +.+.+
T Consensus 76 ~Ta~aL~~~G~~~~~~p~~~~~e~L~~~l~~~-~~~~~vL~~rg~~~~~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~ 154 (229)
T 3p9z_A 76 PTAKTLQDHHFKVAFMGEKAHGKEFVQEIFPL-LEKKSVLYLRAKEIVSSLDTILLEHGIDFKQAVVYENKLKHLTLSEQ 154 (229)
T ss_dssp HHHHHHHHTTCCBCCCCC---------CCHHH-HTTCEEEEEEESSCSSCHHHHHHHTTCEEEEEEEEEEEECCCCHHHH
T ss_pred HHHHHHHHcCCCeeecCCcccHHHHHHHHHhh-CCCCEEEEECCccchHHHHHHHHHCCCeEEEEEEEEeeCCCccHHHH
Confidence 45578888888543322122222333332221 1456775543 23445555542211 11111
Q ss_pred ccc-cccccEEEeCCCCCCHHHHHHHHHHhhccccceeeeehHHHHHHHHhhcCcceeeeeeccc
Q psy12877 733 REL-SAHYDLVVLDPPFLSDECLTKAAVTAKLPLFVSLTVSGEIMQDLALRLLGVKKCKFIPRHK 796 (814)
Q Consensus 733 ~~~-~~~~d~~~~dppfl~~~c~~k~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~f~p~h~ 796 (814)
+.+ .+.+|.|+ |-|....+-..+...++....+.|.|++..+.++++ |++. ..|+++
T Consensus 155 ~~l~~~~~d~v~----ftS~s~v~~~~~~~~~~~~~~~~aIG~~Ta~~l~~~-G~~v--~va~~~ 212 (229)
T 3p9z_A 155 NALKPKEKSILI----FTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQ-GIPS--YIAKKP 212 (229)
T ss_dssp HHHSCCTTCEEE----ECSHHHHHHHHHHSCCCTTCEEEESSHHHHHHHHHT-TCCE--EECSSS
T ss_pred HHHhcCCCeEEE----EECHHHHHHHHHHhCcccCCEEEEECHHHHHHHHHc-CCCc--eeCCCC
Confidence 123 35688887 678777777776666665556789999999988876 6653 356655
No 219
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=22.58 E-value=79 Score=33.74 Aligned_cols=14 Identities=14% Similarity=0.294 Sum_probs=11.9
Q ss_pred ccccEEEeCCCCCC
Q psy12877 737 AHYDLVVLDPPFLS 750 (814)
Q Consensus 737 ~~~d~~~~dppfl~ 750 (814)
++||+||+||||-.
T Consensus 285 ~~fD~Ii~npPyg~ 298 (373)
T 3tm4_A 285 DSVDFAISNLPYGL 298 (373)
T ss_dssp SCEEEEEEECCCC-
T ss_pred CCcCEEEECCCCCc
Confidence 67999999999864
No 220
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=22.29 E-value=98 Score=33.80 Aligned_cols=43 Identities=14% Similarity=0.115 Sum_probs=24.9
Q ss_pred ccccEEEeCCCCCC-HHHHHHHHHHhhccc-ccee--eeehHHHHHHHHhh
Q psy12877 737 AHYDLVVLDPPFLS-DECLTKAAVTAKLPL-FVSL--TVSGEIMQDLALRL 783 (814)
Q Consensus 737 ~~~d~~~~dppfl~-~~c~~k~~~~~~~~~-~~~~--~~~g~~~~~~~~~~ 783 (814)
++||+|++|||+.. ++... .+.-+. .+++ .|.-..+...+..+
T Consensus 355 ~~fD~Vv~dPPr~g~~~~~~----~l~~~~p~~ivyvsc~p~tlard~~~l 401 (433)
T 1uwv_A 355 NGFDKVLLDPARAGAAGVMQ----QIIKLEPIRIVYVSCNPATLARDSEAL 401 (433)
T ss_dssp TCCSEEEECCCTTCCHHHHH----HHHHHCCSEEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEECCCCccHHHHHH----HHHhcCCCeEEEEECChHHHHhhHHHH
Confidence 47999999999963 33322 222222 3343 67666665555555
No 221
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=22.25 E-value=36 Score=33.85 Aligned_cols=15 Identities=33% Similarity=0.917 Sum_probs=12.0
Q ss_pred ccccEEEeCCCCCCH
Q psy12877 737 AHYDLVVLDPPFLSD 751 (814)
Q Consensus 737 ~~~d~~~~dppfl~~ 751 (814)
++||+|++||||...
T Consensus 139 ~~fD~i~~npp~~~~ 153 (254)
T 2h00_A 139 IIYDFCMCNPPFFAN 153 (254)
T ss_dssp CCBSEEEECCCCC--
T ss_pred CcccEEEECCCCccC
Confidence 579999999999864
No 222
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=21.35 E-value=60 Score=34.78 Aligned_cols=13 Identities=23% Similarity=0.353 Sum_probs=10.6
Q ss_pred cccccEEEeCCCC
Q psy12877 736 SAHYDLVVLDPPF 748 (814)
Q Consensus 736 ~~~~d~~~~dppf 748 (814)
..+||+||+|||-
T Consensus 265 ~~~fDvII~D~~d 277 (364)
T 2qfm_A 265 GREFDYVINDLTA 277 (364)
T ss_dssp TCCEEEEEEECCS
T ss_pred CCCceEEEECCCC
Confidence 3679999999954
No 223
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=21.07 E-value=1e+02 Score=28.32 Aligned_cols=30 Identities=20% Similarity=0.432 Sum_probs=19.5
Q ss_pred cccccEEEeCCCCCC-HHHHHHHHHHh-hccc
Q psy12877 736 SAHYDLVVLDPPFLS-DECLTKAAVTA-KLPL 765 (814)
Q Consensus 736 ~~~~d~~~~dppfl~-~~c~~k~~~~~-~~~~ 765 (814)
.++||+|+++|||.. .+-..+.-+.+ ++|.
T Consensus 117 ~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~ 148 (194)
T 1dus_A 117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLK 148 (194)
T ss_dssp TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEE
T ss_pred cCCceEEEECCCcccchhHHHHHHHHHHHHcC
Confidence 367999999999985 44444444443 3443
No 224
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=20.72 E-value=57 Score=35.13 Aligned_cols=50 Identities=24% Similarity=0.210 Sum_probs=28.6
Q ss_pred cccccEEEeCCCCCC-----HHHHHHHHHH-hhcccc--ceeeee--hHHHHHHHHhhcC
Q psy12877 736 SAHYDLVVLDPPFLS-----DECLTKAAVT-AKLPLF--VSLTVS--GEIMQDLALRLLG 785 (814)
Q Consensus 736 ~~~~d~~~~dppfl~-----~~c~~k~~~~-~~~~~~--~~~~~~--g~~~~~~~~~~~~ 785 (814)
.++||+|+++|||-. .+-..+.-.. .+.|.. .+++++ ....+.++++.++
T Consensus 296 ~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~ 355 (381)
T 3dmg_A 296 EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFG 355 (381)
T ss_dssp TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHS
T ss_pred CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhc
Confidence 368999999999975 3434444333 444542 344332 2234566666654
No 225
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=20.50 E-value=1.1e+02 Score=26.40 Aligned_cols=57 Identities=7% Similarity=0.065 Sum_probs=32.9
Q ss_pred ccccEEEeCCCCCCHHHHHHHHHHhhc----cccceeeeehHHHHHHHH-hhcCcceeeeeec
Q psy12877 737 AHYDLVVLDPPFLSDECLTKAAVTAKL----PLFVSLTVSGEIMQDLAL-RLLGVKKCKFIPR 794 (814)
Q Consensus 737 ~~~d~~~~dppfl~~~c~~k~~~~~~~----~~~~~~~~~g~~~~~~~~-~~~~~~~~~f~p~ 794 (814)
..+|+||+|--.-..+.++ ....+|- ...++|++|+..-.+... +.+......|.++
T Consensus 49 ~~~dlvi~d~~l~~~~g~~-~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~k 110 (140)
T 3grc_A 49 RPYAAMTVDLNLPDQDGVS-LIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEK 110 (140)
T ss_dssp SCCSEEEECSCCSSSCHHH-HHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECS
T ss_pred CCCCEEEEeCCCCCCCHHH-HHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeC
Confidence 4589999997654444443 2233332 234688889887665555 5554444444443
No 226
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=20.37 E-value=36 Score=34.53 Aligned_cols=15 Identities=33% Similarity=0.543 Sum_probs=11.2
Q ss_pred ccccEEEeCCCCCCH
Q psy12877 737 AHYDLVVLDPPFLSD 751 (814)
Q Consensus 737 ~~~d~~~~dppfl~~ 751 (814)
++||+|++||||-..
T Consensus 160 ~~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 160 GKPDIVYLDPMYPER 174 (258)
T ss_dssp CCCSEEEECCCC---
T ss_pred CCccEEEECCCCCCc
Confidence 579999999999653
Done!