RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy12877
(814 letters)
>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze
the reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and eukaryotes (cytosol,
microbodies and mitochondria). There are 2 functional
different classes: thiolase-I (3-ketoacyl-CoA thiolase)
and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I
can cleave longer fatty acid molecules and plays an
important role in the beta-oxidative degradation of
fatty acids. Thiolase-II has a high substrate
specificity. Although it can cleave acetoacyl-CoA, its
main function is the synthesis of acetoacyl-CoA from two
molecules of acetyl-CoA, which gives it importance in
several biosynthetic pathways.
Length = 386
Score = 442 bits (1140), Expect = e-149
Identities = 159/316 (50%), Positives = 215/316 (68%), Gaps = 5/316 (1%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV QAG GQ P RQA + AGLP+S TTVN+VC SG++A+ LA+Q+++ G DV+VA
Sbjct: 49 MGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVA 108
Query: 61 GGMESMSNVPFYLNRGETKY-GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 119
GG+ESMS P+ L + G+N +DG++ DGL+D + + MG AEN A+K+ ISR+
Sbjct: 109 GGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISRE 168
Query: 120 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSL 178
EQDE+AL S++++A A + F +IVPV +P RKG ++V+ DE + EK L
Sbjct: 169 EQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKG--PVVVDRDEGPRPDTTLEKLAKL 226
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238
F K++GTVTAGNAS +NDGAAA +LM+EE ++ KPLARI+ Y A +P I
Sbjct: 227 KPAF-KKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGI 285
Query: 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298
P AIP LK G+ D+ L EINEAF+ LA +K+L +DP KVNV+GGA++LGHP+
Sbjct: 286 GPVPAIPKALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPL 345
Query: 299 GMSGARIVIHLCHALK 314
G SGARIV+ L H LK
Sbjct: 346 GASGARIVVTLLHELK 361
Score = 388 bits (1000), Expect = e-128
Identities = 141/299 (47%), Positives = 197/299 (65%), Gaps = 5/299 (1%)
Query: 381 FIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQA 440
IVS RTP+G F +L +SA LGA I++ +++A +D +V +V MGNV QAG GQ
Sbjct: 1 VIVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQN 60
Query: 441 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFY 500
P RQA + AGLP+S TTVN+VC SG++A+ LA+Q+++ G DV+VAGG+ESMS P+
Sbjct: 61 PARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYL 120
Query: 501 LNRGETKY-GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKK 559
L + G+N +DG++ DGL+D + + MG AEN A+K+ ISR+EQDE+AL S+++
Sbjct: 121 LPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSHQR 180
Query: 560 SADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQKENGTVT 618
+A A + F +IVPV +P RKG ++V+ DE + EK L F K++GTVT
Sbjct: 181 AAAAQEAGRFKDEIVPVEVPGRKG--PVVVDRDEGPRPDTTLEKLAKLKPAF-KKDGTVT 237
Query: 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLK 677
AGNAS +NDGAAA +LM+EE ++ KPLARI+ Y A +P I P AIP LK
Sbjct: 238 AGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALK 296
>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase.
Length = 394
Score = 429 bits (1104), Expect = e-144
Identities = 170/317 (53%), Positives = 222/317 (70%), Gaps = 2/317 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
GNV A LGQAP RQA + AGLP ST+CTTVNKVCASGMKA+MLA+Q++ LG DV+VA
Sbjct: 52 FGNVLSANLGQAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVA 111
Query: 61 GGMESMSNVPFYL--NRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GGMESMSN P YL R ++ G ++DG++ DGL DVYN MG CAE A +++ISR
Sbjct: 112 GGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISR 171
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSL 178
+EQD YA+ SY+++ A + F+ +IVPV +P +G+ +IV++DE K + K + L
Sbjct: 172 EEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKL 231
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238
F+++ G+VTAGNAS+++DGAAA VL++ E + + +A+I Y DAA P F
Sbjct: 232 RPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTT 291
Query: 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298
APA AIP LK+ G+ V +EINEAFSVV LAN K L +DP KVNVHGGAVSLGHPI
Sbjct: 292 APALAIPKALKHAGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPI 351
Query: 299 GMSGARIVIHLCHALKS 315
G SGARI++ L L+S
Sbjct: 352 GCSGARILVTLLGVLRS 368
Score = 401 bits (1032), Expect = e-133
Identities = 160/314 (50%), Positives = 220/314 (70%), Gaps = 3/314 (0%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
DV IV +RTP+G F SL SLSAT+LG++AI++A+++A +D + VQEV+ GNV A LG
Sbjct: 2 DVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLG 61
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
QAP RQA + AGLP ST+CTTVNKVCASGMKA+MLA+Q++ LG DV+VAGGMESMSN P
Sbjct: 62 QAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAP 121
Query: 499 FYL--NRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
YL R ++ G ++DG++ DGL DVYN MG CAE A +++ISR+EQD YA+ S
Sbjct: 122 KYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQS 181
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 616
Y+++ A + F+ +IVPV +P +G+ +IV++DE K + K + L F+++ G+
Sbjct: 182 YERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGGS 241
Query: 617 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLL 676
VTAGNAS+++DGAAA VL++ E + + +A+I Y DAA P F APA AIP L
Sbjct: 242 VTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKAL 301
Query: 677 KNGG-QLSQFWYDE 689
K+ G + SQ Y E
Sbjct: 302 KHAGLEASQVDYYE 315
>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases. This
model represents a large family of enzymes which
catalyze the thiolysis of a linear fatty acid CoA (or
acetoacetyl-CoA) using a second CoA molecule to produce
acetyl-CoA and a CoA-ester product two carbons shorter
(or, alternatively, the condensation of two molecules of
acetyl-CoA to produce acetoacetyl-CoA and CoA). This
enzyme is also known as "thiolase", "3-ketoacyl-CoA
thiolase", "beta-ketothiolase" and "Fatty oxidation
complex beta subunit". When catalyzing the degradative
reaction on fatty acids the corresponding EC number is
2.3.1.16. The condensation reaction corresponds to
2.3.1.9. Note that the enzymes which catalyze the
condensation are generally not involved in fatty acid
biosynthesis, which is carried out by a decarboxylating
condensation of acetyl and malonyl esters of acyl
carrier proteins. Rather, this activity may produce
acetoacetyl-CoA for pathways such as IPP biosynthesis in
the absence of sufficient fatty acid oxidation [Fatty
acid and phospholipid metabolism, Other].
Length = 386
Score = 385 bits (992), Expect = e-127
Identities = 159/323 (49%), Positives = 208/323 (64%), Gaps = 7/323 (2%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
GNV QAG Q RQA + AGLP+S TVN+ CASG++A++LA+Q + G DV+VA
Sbjct: 48 FGNVLQAGEQQNIARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVA 107
Query: 61 GGMESMSNVPFYLNRGET---KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNIS 117
GG+ESMS VP+ + R K G L D I+ DGL D N + MG AEN AKK+ IS
Sbjct: 108 GGVESMSRVPYSVPRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGIS 167
Query: 118 RDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKINFEKFK 176
R+EQDEYAL S++++A A++ +F +IVPVS+ RKG ++V+ DE EK
Sbjct: 168 REEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKG--PVVVSSDEGIRPNTTLEKLA 225
Query: 177 SLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF 236
L F NGTVTAGN+S LNDGAAA +LM+EE ++ PLARI++Y A +P
Sbjct: 226 KLKPAF-DPNGTVTAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIM 284
Query: 237 PIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGH 296
+ P AIP LK G++ D+ L+EINEAF+ VLA IK+L +D KVNV+GGA++LGH
Sbjct: 285 GLGPVPAIPKALKKAGLSISDIDLFEINEAFAAQVLACIKELGLDLEKVNVNGGAIALGH 344
Query: 297 PIGMSGARIVIHLCHALKSGQKG 319
P+G SGARIV L H LK
Sbjct: 345 PLGASGARIVTTLLHELKRRGGR 367
Score = 330 bits (849), Expect = e-106
Identities = 138/300 (46%), Positives = 187/300 (62%), Gaps = 7/300 (2%)
Query: 382 IVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAP 441
IV+ +RTP+G F SL +SA LGA I+ +++ +D + +V GNV QAG Q
Sbjct: 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNI 60
Query: 442 CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYL 501
RQA + AGLP+S TVN+ CASG++A++LA+Q + G DV+VAGG+ESMS VP+ +
Sbjct: 61 ARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSV 120
Query: 502 NRGET---KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYK 558
R K G L D I+ DGL D N + MG AEN AKK+ ISR+EQDEYAL S++
Sbjct: 121 PRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQDEYALRSHQ 180
Query: 559 KSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKINFEKFKSLATVFQKENGTV 617
++A A++ +F +IVPVS+ RKG ++V+ DE EK L F NGTV
Sbjct: 181 RAAKAWEEGLFKDEIVPVSVKGRKG--PVVVSSDEGIRPNTTLEKLAKLKPAF-DPNGTV 237
Query: 618 TAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLK 677
TAGN+S LNDGAAA +LM+EE ++ PLARI++Y A +P + P AIP LK
Sbjct: 238 TAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIMGLGPVPAIPKALK 297
>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional.
Length = 393
Score = 377 bits (971), Expect = e-124
Identities = 152/317 (47%), Positives = 204/317 (64%), Gaps = 5/317 (1%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MG V QAG GQ P RQA + AGLP T+NKVC SG+KA+ LA+Q + G D++VA
Sbjct: 53 MGQVLQAGAGQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVA 112
Query: 61 GGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GG ESMS P L R K G + L+D +++DGL+D +N HMG AEN A+++ I+R
Sbjct: 113 GGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITR 172
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKS 177
+EQDE+AL+S +K+ A K F +IVPV+I QRKG ++V+ DE + E
Sbjct: 173 EEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDP-VVVDTDEHPRPDTTAESLAK 231
Query: 178 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237
L F ++GTVTAGNAS +NDGAAA V+M+E ++ PLARI++Y A +P
Sbjct: 232 LRPAF-DKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMG 290
Query: 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHP 297
I P AI L+ G + D+ L EINEAF+ LA K+L +DP KVNV+GGA++LGHP
Sbjct: 291 IGPVPAIRKALEKAGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHP 350
Query: 298 IGMSGARIVIHLCHALK 314
IG SGARI++ L H +K
Sbjct: 351 IGASGARILVTLLHEMK 367
Score = 349 bits (899), Expect = e-113
Identities = 139/305 (45%), Positives = 192/305 (62%), Gaps = 5/305 (1%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
DV IVS +RTP+G F +L +SA +LGA+ I++A+++A + V EV MG V QAG G
Sbjct: 3 DVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAG 62
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
Q P RQA + AGLP T+NKVC SG+KA+ LA+Q + G D++VAGG ESMS P
Sbjct: 63 QNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAP 122
Query: 499 FYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
L R K G + L+D +++DGL+D +N HMG AEN A+++ I+R+EQDE+AL+S
Sbjct: 123 HVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALAS 182
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKENG 615
+K+ A K F +IVPV+I QRKG ++V+ DE + E L F ++G
Sbjct: 183 QQKAEAAIKAGRFKDEIVPVTIKQRKGDP-VVVDTDEHPRPDTTAESLAKLRPAF-DKDG 240
Query: 616 TVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTL 675
TVTAGNAS +NDGAAA V+M+E ++ PLARI++Y A +P I P AI
Sbjct: 241 TVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKA 300
Query: 676 LKNGG 680
L+ G
Sbjct: 301 LEKAG 305
>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 359 bits (923), Expect = e-117
Identities = 156/317 (49%), Positives = 203/317 (64%), Gaps = 5/317 (1%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MG V Q G GQ P RQA AG+P TVNKVCASG++A+ LA Q + G V+VA
Sbjct: 53 MGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVA 112
Query: 61 GGMESMSNVPFYLNRGETKY--GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GGMESMSN P+ L Y G +ID +V DGL+ ++ +HMG AK+ ISR
Sbjct: 113 GGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISR 172
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKS 177
+ QDE+A S++++ A++ F +IVPV+IPQRKG I+V +DE +K EK
Sbjct: 173 EAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDP-IVVAKDEAPRKDTTIEKLAK 231
Query: 178 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237
L VF K GT+TAGNA +NDGAAA VLM+E+ ++ KPLA I+A+ A E DFP
Sbjct: 232 LKPVFDKT-GTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFP 290
Query: 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHP 297
P +AI LL+ G +D+ L+EINEAF+ V LA+ + IDP KVNV+GGAV+LGHP
Sbjct: 291 RTPGYAINALLEKTGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHP 350
Query: 298 IGMSGARIVIHLCHALK 314
IG SGARI++ L H LK
Sbjct: 351 IGASGARIIVTLIHELK 367
Score = 320 bits (822), Expect = e-102
Identities = 142/302 (47%), Positives = 189/302 (62%), Gaps = 5/302 (1%)
Query: 382 IVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAP 441
IVS +RTP G F SL + AT+LG +AI+ A+++AN+ DV+EV MG V Q G GQ P
Sbjct: 6 IVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIP 65
Query: 442 CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYL 501
RQA AG+P TVNKVCASG++A+ LA Q + G V+VAGGMESMSN P+ L
Sbjct: 66 SRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYIL 125
Query: 502 NRGETKY--GGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKK 559
Y G +ID +V DGL+ ++ +HMG AK+ ISR+ QDE+A S+++
Sbjct: 126 PGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYRSHQR 185
Query: 560 SADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQKENGTVT 618
+ A++ F +IVPV+IPQRKG I+V +DE +K EK L VF K GT+T
Sbjct: 186 AVSAHEEGRFEEEIVPVTIPQRKGDP-IVVAKDEAPRKDTTIEKLAKLKPVFDKT-GTIT 243
Query: 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKN 678
AGNA +NDGAAA VLM+E+ ++ KPLA I+A+ A E DFP P +AI LL+
Sbjct: 244 AGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEK 303
Query: 679 GG 680
G
Sbjct: 304 TG 305
>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 262
Score = 344 bits (885), Expect = e-113
Identities = 137/262 (52%), Positives = 176/262 (67%), Gaps = 2/262 (0%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
DV IVS +RTP+GSF SL LSA LGA+AI++A+++A + DV EV MGNV QAG G
Sbjct: 1 DVVIVSAARTPIGSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEG 60
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
Q P RQA + AG+P S T+NKVC SG+KA+ LA+Q + G D++VAGG+ESMSN P
Sbjct: 61 QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSNAP 120
Query: 499 FYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
+ L R + G L+D ++ DGL+D +N IHMG AEN AKK+ ISR+EQDE+AL S
Sbjct: 121 YVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDEFALRS 180
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 616
+K+A A K F +IVPV+I RKGK ++ ++ E L F KENGT
Sbjct: 181 QQKAAAAQKAGKFKDEIVPVTIKGRKGKPLVVDKDEGIRPGTTLESLAKLKPAFDKENGT 240
Query: 617 VTAGNASTLNDGAAACVLMTEE 638
VTAGNAS LNDGAAA +LM+E
Sbjct: 241 VTAGNASGLNDGAAAVLLMSES 262
Score = 282 bits (724), Expect = 2e-89
Identities = 110/212 (51%), Positives = 140/212 (66%), Gaps = 2/212 (0%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV QAG GQ P RQA + AG+P S T+NKVC SG+KA+ LA+Q + G D++VA
Sbjct: 51 MGNVLQAGEGQNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVA 110
Query: 61 GGMESMSNVPFYLN--RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GG+ESMSN P+ L R + G L+D ++ DGL+D +N IHMG AEN AKK+ ISR
Sbjct: 111 GGVESMSNAPYVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISR 170
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSL 178
+EQDE+AL S +K+A A K F +IVPV+I RKGK ++ ++ E L
Sbjct: 171 EEQDEFALRSQQKAAAAQKAGKFKDEIVPVTIKGRKGKPLVVDKDEGIRPGTTLESLAKL 230
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEE 210
F KENGTVTAGNAS LNDGAAA +LM+E
Sbjct: 231 KPAFDKENGTVTAGNASGLNDGAAAVLLMSES 262
>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional.
Length = 397
Score = 294 bits (753), Expect = 7e-92
Identities = 145/327 (44%), Positives = 202/327 (61%), Gaps = 8/327 (2%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MG V AG GQAP RQA + AGLP S CTTVNK+C SGM+A M A L G DV+VA
Sbjct: 58 MGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVA 117
Query: 61 GGMESMSNVPFYL--NRGETKYGGMNLIDGIVYDGLSDVYNKIH-MGNCAENTAKKFNIS 117
GGMESM+N P+ L RG + G ++D + DGL D Y+K MG AE A ++ +
Sbjct: 118 GGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFT 177
Query: 118 RDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKS 177
R+ QD +A+ S ++ A ++ F+ +I PV++ +KG D +++ DE+ K N EK +
Sbjct: 178 REAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKG--DTVIDRDEQPFKANPEKIPT 235
Query: 178 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 237
L F K GTVTA N+S+++DGAAA V+M ++ PLAR++ + A P F
Sbjct: 236 LKPAFSK-TGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFT 294
Query: 238 IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHP 297
AP AI L + G +V L+EINEAF+VV +A +K+ + KVNV+GGA +LGHP
Sbjct: 295 TAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHP 354
Query: 298 IGMSGARIVIHLCHALKS--GQKGQLS 322
IG SGARI++ L AL++ G++G S
Sbjct: 355 IGASGARILVTLIGALRARGGKRGVAS 381
Score = 270 bits (692), Expect = 5e-83
Identities = 128/304 (42%), Positives = 182/304 (59%), Gaps = 6/304 (1%)
Query: 380 VFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQ 439
+ I S +RTPM +F+ SL+A +LGA AI +A+++A + + EV MG V AG GQ
Sbjct: 9 IVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQ 68
Query: 440 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPF 499
AP RQA + AGLP S CTTVNK+C SGM+A M A L G DV+VAGGMESM+N P+
Sbjct: 69 APARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPY 128
Query: 500 YL--NRGETKYGGMNLIDGIVYDGLSDVYNKIH-MGNCAENTAKKFNISRDEQDEYALSS 556
L RG + G ++D + DGL D Y+K MG AE A ++ +R+ QD +A+ S
Sbjct: 129 LLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTREAQDAFAIES 188
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 616
++ A ++ F+ +I PV++ +KG D +++ DE+ K N EK +L F K GT
Sbjct: 189 LARAKRANEDGSFAWEIAPVTVAGKKG--DTVIDRDEQPFKANPEKIPTLKPAFSK-TGT 245
Query: 617 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLL 676
VTA N+S+++DGAAA V+M ++ PLAR++ + A P F AP AI L
Sbjct: 246 VTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLF 305
Query: 677 KNGG 680
+ G
Sbjct: 306 EKNG 309
>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional.
Length = 394
Score = 281 bits (722), Expect = 3e-87
Identities = 128/303 (42%), Positives = 176/303 (58%), Gaps = 6/303 (1%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYL- 73
R A I AG+P+ T VN++C SG++AI+ A+Q + LG DV + GG ESMS P+ L
Sbjct: 69 RVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLP 128
Query: 74 -NRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKS 132
R + G L+D +V L D + IHMG AEN A K+ ISR+ QD AL S++++
Sbjct: 129 AARWGARMGDAKLVDMMV-GALHDPFGTIHMGVTAENVAAKYGISREAQDALALESHRRA 187
Query: 133 ADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKENGTVTA 191
A A F QIVPV I RKG +++ + DE + E L VF+KENGTVTA
Sbjct: 188 AAAIAAGYFKDQIVPVEIKTRKG--EVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTA 245
Query: 192 GNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNG 251
GNAS +NDGAAA VL +A KPLAR++ Y A +P I P A L+
Sbjct: 246 GNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERA 305
Query: 252 GVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCH 311
G+ D+ + E NEAF+ A ++L +DP+KVN +G +SLGHP+G +GA I + +
Sbjct: 306 GLTVADLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALY 365
Query: 312 ALK 314
L+
Sbjct: 366 ELQ 368
Score = 262 bits (671), Expect = 7e-80
Identities = 126/310 (40%), Positives = 170/310 (54%), Gaps = 15/310 (4%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQ---- 434
+V +VSG RT +G+F SL ++ T LGA + A+ +A +D V V G+V
Sbjct: 4 EVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPR 63
Query: 435 -AGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 493
L R A I AG+P+ T VN++C SG++AI+ A+Q + LG DV + GG ES
Sbjct: 64 DMYLS----RVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAES 119
Query: 494 MSNVPFYL--NRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDE 551
MS P+ L R + G L+D +V L D + IHMG AEN A K+ ISR+ QD
Sbjct: 120 MSRAPYLLPAARWGARMGDAKLVDMMV-GALHDPFGTIHMGVTAENVAAKYGISREAQDA 178
Query: 552 YALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVF 610
AL S++++A A F QIVPV I RKG +++ + DE + E L VF
Sbjct: 179 LALESHRRAAAAIAAGYFKDQIVPVEIKTRKG--EVVFDTDEHVRADTTLEDLAKLKPVF 236
Query: 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAF 670
+KENGTVTAGNAS +NDGAAA VL +A KPLAR++ Y A +P I P
Sbjct: 237 KKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVP 296
Query: 671 AIPTLLKNGG 680
A L+ G
Sbjct: 297 ATQKALERAG 306
>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism].
Length = 392
Score = 269 bits (691), Expect = 8e-83
Identities = 124/320 (38%), Positives = 173/320 (54%), Gaps = 20/320 (6%)
Query: 1 MGNVCQAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
+G V QAG GQ RQA + AGLP S TVN+ CASG+ A+ LA+Q ++ G DV++
Sbjct: 56 LGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVL 115
Query: 60 AGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 119
AGG+E MS+ P E + +D + D L D MG AE AK++ ISR+
Sbjct: 116 AGGVEKMSDAPMG---REGVRVLDSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISRE 172
Query: 120 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINF----EKF 175
+QDE A+ S+K +A K F +I P + V D ++++ +
Sbjct: 173 DQDEVAVKSHKNAAANPKAGFF-DEITPEDVLNS------PVVAD-PLRRLDCSPTSDGA 224
Query: 176 KSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPID 235
+L F++ GTVTAGNAS +NDGAAA +LM+E ++ PLA I AY A +P
Sbjct: 225 AALVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDP-S 283
Query: 236 FPIAPAFAIPTLL-KNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSL 294
P A+ L G +A +D+ L E EAF+ V L K L P VN GGA++L
Sbjct: 284 IMDGPVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKILGDLP--VNPSGGAIAL 341
Query: 295 GHPIGMSGARIVIHLCHALK 314
GHPIG +GARI++ L L+
Sbjct: 342 GHPIGATGARILVELARQLR 361
Score = 236 bits (605), Expect = 2e-70
Identities = 116/309 (37%), Positives = 165/309 (53%), Gaps = 20/309 (6%)
Query: 377 PGDVFIVSGSRTPMGSFRS-SLVSLSATKLGAVAIESAIQK--ANMDKSDVQEVYMGNVC 433
DV IV RTP G F SL L+A LGA I++ +++ A++D +DV +V +G V
Sbjct: 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVL 60
Query: 434 QAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGME 492
QAG GQ RQA + AGLP S TVN+ CASG+ A+ LA+Q ++ G DV++AGG+E
Sbjct: 61 QAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVE 120
Query: 493 SMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEY 552
MS+ P E + +D + D L D MG AE AK++ ISR++QDE
Sbjct: 121 KMSDAPMG---REGVRVLDSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDEV 177
Query: 553 ALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINF----EKFKSLAT 608
A+ S+K +A K F +I P + V D ++++ + +L
Sbjct: 178 AVKSHKNAAANPKAGFF-DEITPEDVLNS------PVVAD-PLRRLDCSPTSDGAAALVP 229
Query: 609 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAP 668
F++ GTVTAGNAS +NDGAAA +LM+E ++ PLA I AY A +P P
Sbjct: 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDP-SIMDGP 288
Query: 669 AFAIPTLLK 677
A+ L
Sbjct: 289 VAAVHDALT 297
>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 267 bits (684), Expect = 7e-82
Identities = 136/323 (42%), Positives = 191/323 (59%), Gaps = 5/323 (1%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+G V AG GQ P RQA I AGLP S T+NKVC SG+KA+ LA+Q + G +V++A
Sbjct: 53 LGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIA 112
Query: 61 GGMESMSNVPFYLNRGET--KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
GG E+MS P+ L T + G L+D ++ DGL D +N HMG AEN +K+ ISR
Sbjct: 113 GGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISR 172
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSL 178
+ QD +A +S +K+ A + F +I P+ IPQRKG+ +++ E L
Sbjct: 173 EAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKL 232
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238
F+K+ G+VTAGNAS+LNDGAAA +LM+ + LA+I AY +A +P I
Sbjct: 233 KPAFKKD-GSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGI 291
Query: 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298
P A L G + ++ L E NEAF+ LA K+L D +KVNV+GGA++LGHPI
Sbjct: 292 GPVSATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPI 351
Query: 299 GMSGARIVIHLCHAL--KSGQKG 319
G SG R+++ L H + + +KG
Sbjct: 352 GASGCRVLVTLLHEMIRRDAKKG 374
Score = 251 bits (643), Expect = 5e-76
Identities = 127/309 (41%), Positives = 181/309 (58%), Gaps = 4/309 (1%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
DV IV+ +RT +GSF+ SL ++ A +LGA I +++ +D + V EV +G V AG G
Sbjct: 3 DVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAG 62
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
Q P RQA I AGLP S T+NKVC SG+KA+ LA+Q + G +V++AGG E+MS P
Sbjct: 63 QNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAP 122
Query: 499 FYLNRGET--KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
+ L T + G L+D ++ DGL D +N HMG AEN +K+ ISR+ QD +A +S
Sbjct: 123 YVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAAS 182
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 616
+K+ A + F +I P+ IPQRKG+ +++ E L F+K+ G+
Sbjct: 183 QQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKD-GS 241
Query: 617 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLL 676
VTAGNAS+LNDGAAA +LM+ + LA+I AY +A +P I P A L
Sbjct: 242 VTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCL 301
Query: 677 -KNGGQLSQ 684
K G L++
Sbjct: 302 DKAGWSLAE 310
>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 253 bits (646), Expect = 2e-76
Identities = 130/319 (40%), Positives = 200/319 (62%), Gaps = 5/319 (1%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+G V G GQ P RQ +I AG+PK T+NKVC SG+K++ LA+ ++ G ++++A
Sbjct: 54 LGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIA 113
Query: 61 GGMESMS-NVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 119
GG E+MS + R K+G + ++D + YDGL+DV++ + MG AEN +K+FNISR
Sbjct: 114 GGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQ 173
Query: 120 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSL 178
EQDE+ALSS+KK+A A +F +I+P+ + +K + + + DE + + E L
Sbjct: 174 EQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTS--LFDHDETVRPDTSLEILSKL 231
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238
F K NG VTAGNAS++NDGAA ++++EEA++K N PLARI++Y A +P
Sbjct: 232 RPAFDK-NGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGT 290
Query: 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298
AP A L G + D+ + E+NEAF+ + +++ D KVN++GGA+++GHPI
Sbjct: 291 APVPASQKALSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPI 350
Query: 299 GMSGARIVIHLCHALKSGQ 317
G SG R++I L H L+ +
Sbjct: 351 GASGGRVLITLIHGLRRAK 369
Score = 227 bits (580), Expect = 5e-67
Identities = 123/303 (40%), Positives = 182/303 (60%), Gaps = 5/303 (1%)
Query: 380 VFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQ 439
V+I RT GSF SL + A L A I+ +Q + +D + V EV +G V G GQ
Sbjct: 5 VYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQ 64
Query: 440 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS-NVP 498
P RQ +I AG+PK T+NKVC SG+K++ LA+ ++ G ++++AGG E+MS +
Sbjct: 65 NPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMH 124
Query: 499 FYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYK 558
R K+G + ++D + YDGL+DV++ + MG AEN +K+FNISR EQDE+ALSS+K
Sbjct: 125 GSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQDEFALSSHK 184
Query: 559 KSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKENGTV 617
K+A A +F +I+P+ + +K + + + DE + + E L F K NG V
Sbjct: 185 KAAKAQLAGIFKDEILPIEVTIKKTTS--LFDHDETVRPDTSLEILSKLRPAFDK-NGVV 241
Query: 618 TAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLK 677
TAGNAS++NDGAA ++++EEA++K N PLARI++Y A +P AP A L
Sbjct: 242 TAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALS 301
Query: 678 NGG 680
G
Sbjct: 302 KAG 304
>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated.
Length = 401
Score = 247 bits (632), Expect = 4e-74
Identities = 121/313 (38%), Positives = 180/313 (57%), Gaps = 19/313 (6%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R + + AGLP S TT+N++C SGM A+ A++ + G ++M+AGG+ESMS PF +
Sbjct: 69 RMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMG 128
Query: 75 RGETKYGGMNLIDGIVYDG----------LSDVYNKIHMGNCAENTAKKFNISRDEQDEY 124
+ ++ + I +D + Y M AEN A+ +NISR +QD +
Sbjct: 129 KADSAFSRQAEI----FDTTIGWRFVNPLMKAQYGVDSMPETAENVAEDYNISRADQDAF 184
Query: 125 ALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQ 183
AL S +++A A + +IVPV+IPQ+KG ++V+ DE + E L VF
Sbjct: 185 ALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDP-VVVDRDEHPRPETTLEALAKLKPVF- 242
Query: 184 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFA 243
+ +GTVTAGNAS +NDGAAA +L +E A +K P ARI+ A EP I PA A
Sbjct: 243 RPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPA 302
Query: 244 IPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDI--DPSKVNVHGGAVSLGHPIGMS 301
LL G+ + E+NEAF+ LA +++L + D ++VN +GGA++LGHP+GMS
Sbjct: 303 TRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMS 362
Query: 302 GARIVIHLCHALK 314
GAR+V+ H L+
Sbjct: 363 GARLVLTALHQLE 375
Score = 223 bits (571), Expect = 2e-65
Identities = 116/321 (36%), Positives = 172/321 (53%), Gaps = 20/321 (6%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAGL 437
+ FI RTP+G + +L S+ A LGAV +++ + + +D V +V G QAG
Sbjct: 3 EAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGE 62
Query: 438 -GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
+ R + + AGLP S TT+N++C SGM A+ A++ + G ++M+AGG+ESMS
Sbjct: 63 DNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSR 122
Query: 497 VPFYLNRGETKYGGMNLIDGIVYDG----------LSDVYNKIHMGNCAENTAKKFNISR 546
PF + + ++ + I +D + Y M AEN A+ +NISR
Sbjct: 123 APFVMGKADSAFSRQAEI----FDTTIGWRFVNPLMKAQYGVDSMPETAENVAEDYNISR 178
Query: 547 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKS 605
+QD +AL S +++A A + +IVPV+IPQ+KG ++V+ DE + E
Sbjct: 179 ADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDP-VVVDRDEHPRPETTLEALAK 237
Query: 606 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 665
L VF + +GTVTAGNAS +NDGAAA +L +E A +K P ARI+ A EP
Sbjct: 238 LKPVF-RPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMG 296
Query: 666 IAPAFAIPTLLKNGG-QLSQF 685
I PA A LL G + QF
Sbjct: 297 IGPAPATRKLLARLGLTIDQF 317
>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional.
Length = 388
Score = 243 bits (622), Expect = 4e-73
Identities = 132/322 (40%), Positives = 196/322 (60%), Gaps = 19/322 (5%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
MGNV QAG+GQ P QA AGLP TVN VCASGM A+ A++ + LG +D+++A
Sbjct: 53 MGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIA 112
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLI-------DGIVYDGLSDVYNKIHMGNCAENTAKK 113
GGME+MSN PF L + ++G +L+ D ++ DGL D + HMG AE TA+K
Sbjct: 113 GGMENMSNAPFLLP-SDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARK 171
Query: 114 FNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFE 173
+ I+R+ DEY++ SY+++ A ++ F ++IVP + ++ DE +K E
Sbjct: 172 YGITREMADEYSVQSYERAIRATESGEFRNEIVPFND----------LDRDEGIRKTTME 221
Query: 174 KFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP 233
L F K NG +TAGN++ L+DG +A V+ +E+A+ ++ KP+ARI Y A+ +P
Sbjct: 222 DLAKLPPAFDK-NGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDP 280
Query: 234 IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVS 293
+DF AP A LL+ + L E NEAFS+ + +L ID + NV+GGAV+
Sbjct: 281 LDFVEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVA 340
Query: 294 LGHPIGMSGARIVIHLCHALKS 315
+GHPIG SG+RI++ L +ALK+
Sbjct: 341 IGHPIGNSGSRIIVTLINALKT 362
Score = 241 bits (616), Expect = 3e-72
Identities = 128/317 (40%), Positives = 189/317 (59%), Gaps = 20/317 (6%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
DV+IVS RT +G F S + A +LG AI++ I A +D + VQEV MGNV QAG+G
Sbjct: 3 DVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVG 62
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
Q P QA AGLP TVN VCASGM A+ A++ + LG +D+++AGGME+MSN P
Sbjct: 63 QNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAP 122
Query: 499 FYLNRGETKYGGMNLI-------DGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDE 551
F L + ++G +L+ D ++ DGL D + HMG AE TA+K+ I+R+ DE
Sbjct: 123 FLLP-SDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMADE 181
Query: 552 YALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQ 611
Y++ SY+++ A ++ F ++IVP + ++ DE +K E L F
Sbjct: 182 YSVQSYERAIRATESGEFRNEIVPFN----------DLDRDEGIRKTTMEDLAKLPPAFD 231
Query: 612 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFA 671
K NG +TAGN++ L+DG +A V+ +E+A+ ++ KP+ARI Y A+ +P+DF AP A
Sbjct: 232 K-NGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPA 290
Query: 672 IPTLLKNGGQLSQFWYD 688
LL+ + S +YD
Sbjct: 291 TRKLLEKQNK-SIDYYD 306
>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase. Members of this family
are designated beta-ketoadipyl CoA thiolase, an enzyme
that acts at the end of pathways for the degradation of
protocatechuate (from benzoate and related compounds)
and of phenylacetic acid.
Length = 400
Score = 239 bits (612), Expect = 2e-71
Identities = 118/312 (37%), Positives = 183/312 (58%), Gaps = 9/312 (2%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R A + AGLP S TTVN++C SG+ AI +A++ + G D+++AGG+ESMS PF +
Sbjct: 68 RMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMG 127
Query: 75 RGETKYG-GMNLIDG-----IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 128
+ ++ + + D + + +Y M AEN A++F ISR++QD +AL S
Sbjct: 128 KADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGISREDQDAFALRS 187
Query: 129 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 188
+++A A + F+ +IVPV IPQ+KG+ ++ ++ + E L V + +GT
Sbjct: 188 QQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLKPVV-RPDGT 246
Query: 189 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLL 248
VTAGNAS +NDGAAA +L +EEAV++ P ARI+A A EP I P A LL
Sbjct: 247 VTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLL 306
Query: 249 KNGGVAKQDVALWEINEAFSVVVLANIKKLDI--DPSKVNVHGGAVSLGHPIGMSGARIV 306
G++ + E+NEAF+ LA +++L + D ++VN +GGA++LGHP+G SGAR+V
Sbjct: 307 ARAGLSIDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLV 366
Query: 307 IHLCHALKSGQK 318
+ L+
Sbjct: 367 LTALRQLERSGG 378
Score = 215 bits (550), Expect = 1e-62
Identities = 114/316 (36%), Positives = 176/316 (55%), Gaps = 10/316 (3%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAGL 437
+ +I RTP+G + SL S+ A L AV I++ + + +D + + +V G QAG
Sbjct: 2 EAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGE 61
Query: 438 -GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
+ R A + AGLP S TTVN++C SG+ AI +A++ + G D+++AGG+ESMS
Sbjct: 62 DNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSR 121
Query: 497 VPFYLNRGETKYG-GMNLIDG-----IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQD 550
PF + + ++ + + D + + +Y M AEN A++F ISR++QD
Sbjct: 122 APFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGISREDQD 181
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610
+AL S +++A A + F+ +IVPV IPQ+KG+ ++ ++ + E L V
Sbjct: 182 AFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLKPVV 241
Query: 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAF 670
+ +GTVTAGNAS +NDGAAA +L +EEAV++ P ARI+A A EP I P
Sbjct: 242 -RPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVP 300
Query: 671 AIPTLLKNGG-QLSQF 685
A LL G + QF
Sbjct: 301 ATQKLLARAGLSIDQF 316
>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional.
Length = 400
Score = 239 bits (611), Expect = 3e-71
Identities = 116/308 (37%), Positives = 178/308 (57%), Gaps = 10/308 (3%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R +++ AGLP +T+N++C SGM A+ +A++ + G +M+AGG+ESMS PF +
Sbjct: 69 RMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMG 128
Query: 75 RGETKYGGMNLIDG------IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 128
+ E+ + I V + +Y M AEN A +N+SR +QD +AL S
Sbjct: 129 KAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPETAENVATDYNVSRADQDAFALRS 188
Query: 129 YKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGT 188
+K+A A + + +IVPV+IPQ+KG ++V+ DE ++ E L V + +GT
Sbjct: 189 QQKAARAQADGTLAQEIVPVTIPQKKGDP-LVVSRDEHPRETTLEALAKLKGVV-RPDGT 246
Query: 189 VTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLL 248
VTAGNAS +NDGA A +L +E A R+ KP AR++ A EP I PA A LL
Sbjct: 247 VTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLL 306
Query: 249 KNGGVAKQDVALWEINEAFSVVVLANIKKLDI--DPSKVNVHGGAVSLGHPIGMSGARIV 306
G+ + E+NEAF+ LA +++L + D ++VN +GGA++LGHP+G SGAR+V
Sbjct: 307 ARLGMTLDQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLV 366
Query: 307 IHLCHALK 314
+ L+
Sbjct: 367 TTALYQLE 374
Score = 218 bits (558), Expect = 9e-64
Identities = 113/316 (35%), Positives = 175/316 (55%), Gaps = 11/316 (3%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQAGL 437
+ FI RTP+G + +L S+ A LGAV +++ +++ ++D + + +V G QAG
Sbjct: 3 EAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGE 62
Query: 438 -GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
+ R +++ AGLP +T+N++C SGM A+ +A++ + G +M+AGG+ESMS
Sbjct: 63 DNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSR 122
Query: 497 VPFYLNRGETKYGGMNLIDG------IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQD 550
PF + + E+ + I V + +Y M AEN A +N+SR +QD
Sbjct: 123 APFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPETAENVATDYNVSRADQD 182
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610
+AL S +K+A A + + +IVPV+IPQ+KG ++V+ DE ++ E L V
Sbjct: 183 AFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDP-LVVSRDEHPRETTLEALAKLKGVV 241
Query: 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAF 670
+ +GTVTAGNAS +NDGA A +L +E A R+ KP AR++ A EP I PA
Sbjct: 242 -RPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAP 300
Query: 671 AIPTLLKNGGQ-LSQF 685
A LL G L QF
Sbjct: 301 ATQKLLARLGMTLDQF 316
>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional.
Length = 404
Score = 229 bits (585), Expect = 2e-67
Identities = 117/324 (36%), Positives = 176/324 (54%), Gaps = 25/324 (7%)
Query: 10 GQAPC--RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67
G+AP R A + AGLP + +++ C SG++A++ A+ + G DV++AGG ESMS
Sbjct: 60 GEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMS 119
Query: 68 NVPFYLN--RGETKYGGMNLIDGIVYDGLSDV--------YNKIH-MGNCAENTAKKFNI 116
NV FY R + GG+ L +D L+ + M AEN +++ I
Sbjct: 120 NVEFYTTDMRWGVRGGGVQL-----HDRLARGRETAGGRRFPVPGGMIETAENLRREYGI 174
Query: 117 SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKF 175
SR+EQD A+ S++++ A + F +IVPV++PQRKG +V+ DE + E
Sbjct: 175 SREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKG-DPTVVDRDEHPRADTTLESL 233
Query: 176 KSLATVFQK--ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP 233
L + K TVTAGNAS ND AAAC++ TE+ + +PLAR++++ A EP
Sbjct: 234 AKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEP 293
Query: 234 IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDI---DPSKVNVHGG 290
I P A L G+ D+ L E+NEAF+ VLA +K+ D ++NV+G
Sbjct: 294 SRMGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGS 353
Query: 291 AVSLGHPIGMSGARIVIHLCHALK 314
+SLGHP+G +G RI+ L L+
Sbjct: 354 GISLGHPVGATGGRILATLLRELQ 377
Score = 204 bits (520), Expect = 2e-58
Identities = 105/318 (33%), Positives = 162/318 (50%), Gaps = 24/318 (7%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
D I RTP+G F + + A +L A I + +++ +D + + +V G G
Sbjct: 3 DAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQ-GYPN-G 60
Query: 439 QAPC--RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
+AP R A + AGLP + +++ C SG++A++ A+ + G DV++AGG ESMSN
Sbjct: 61 EAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSN 120
Query: 497 VPFYLN--RGETKYGGMNLIDGIVYDGLSDV--------YNKIH-MGNCAENTAKKFNIS 545
V FY R + GG+ L +D L+ + M AEN +++ IS
Sbjct: 121 VEFYTTDMRWGVRGGGVQL-----HDRLARGRETAGGRRFPVPGGMIETAENLRREYGIS 175
Query: 546 RDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFK 604
R+EQD A+ S++++ A + F +IVPV++PQRKG +V+ DE + E
Sbjct: 176 REEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKG-DPTVVDRDEHPRADTTLESLA 234
Query: 605 SLATVFQK--ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI 662
L + K TVTAGNAS ND AAAC++ TE+ + +PLAR++++ A EP
Sbjct: 235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPS 294
Query: 663 DFPIAPAFAIPTLLKNGG 680
I P A L G
Sbjct: 295 RMGIGPVPATEKALARAG 312
>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 219 bits (560), Expect = 4e-64
Identities = 116/315 (36%), Positives = 173/315 (54%), Gaps = 27/315 (8%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
RQ + AGLP + TVN+ C+SG++ I LA+Q + G DV VAGG+ES+S V +N
Sbjct: 69 RQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMN 128
Query: 75 RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSAD 134
R L +G + + ++Y M AEN AK++ IS++ QDEY + S +++A
Sbjct: 129 R-------HMLREGWLVEHKPEIY--WSMLQTAENVAKRYGISKERQDEYGVQSQQRAAA 179
Query: 135 AYKNNVFSSQIVPVSIPQRKGKAD----------IIVNEDEEYKK-INFEKFKSLATVFQ 183
A F +IVP+++ G AD + V+ DE + E + +
Sbjct: 180 AQAAGRFDDEIVPITV--TAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL- 236
Query: 184 KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFA 243
G +TAGNAS +DGA+ACV+M + + +PL + A EP + I P FA
Sbjct: 237 -PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFA 295
Query: 244 IPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGA 303
+P LLK G+ D+ LWE+NEAF+V VL L I ++NV+GGA+++GHP G+SGA
Sbjct: 296 VPKLLKQAGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGA 355
Query: 304 RIVIHLCHALKSGQK 318
R+ HAL G++
Sbjct: 356 RLT---GHALIEGKR 367
Score = 178 bits (453), Expect = 3e-49
Identities = 105/315 (33%), Positives = 163/315 (51%), Gaps = 26/315 (8%)
Query: 379 DVFIVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAG- 436
+ IVS +RTP+ S+R + LG ++ A+++A +D ++V++V MG G
Sbjct: 3 EAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGA 62
Query: 437 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
G RQ + AGLP + TVN+ C+SG++ I LA+Q + G DV VAGG+ES+S
Sbjct: 63 TGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISC 122
Query: 497 VPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSS 556
V +NR L +G + + ++Y M AEN AK++ IS++ QDEY + S
Sbjct: 123 VQNEMNR-------HMLREGWLVEHKPEIY--WSMLQTAENVAKRYGISKERQDEYGVQS 173
Query: 557 YKKSADAYKNNVFSSQIVPVSIPQRKGKAD----------IIVNEDEEYKK-INFEKFKS 605
+++A A F +IVP+++ G AD + V+ DE + E
Sbjct: 174 QQRAAAAQAAGRFDDEIVPITV--TAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSK 231
Query: 606 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFP 665
+ + G +TAGNAS +DGA+ACV+M + + +PL + A EP +
Sbjct: 232 IRSAL--PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMG 289
Query: 666 IAPAFAIPTLLKNGG 680
I P FA+P LLK G
Sbjct: 290 IGPVFAVPKLLKQAG 304
>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional.
Length = 394
Score = 218 bits (556), Expect = 1e-63
Identities = 104/302 (34%), Positives = 169/302 (55%), Gaps = 25/302 (8%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R + A LP + V++ CAS + + + + ++ G D+++AGG+E M+ P N
Sbjct: 74 RHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDN 133
Query: 75 ---------RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYA 125
+ KY +L G V MG AE A++ I R+E D ++
Sbjct: 134 PHIEPNPKLLTDPKYIEYDLTTGYV------------MGLTAEKLAEEAGIKREEMDRWS 181
Query: 126 LSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQK 184
L S++ +A A + F +I+P+ + + +GK +V+ D+ + + EK L F K
Sbjct: 182 LRSHQLAAKAIQEGYFKDEILPIEV-EVEGK-KKVVDVDQSVRPDTSLEKLAKLPPAF-K 238
Query: 185 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAI 244
+G +TAGN+S LN GA+ +LM+++AV+K+ KP+A+I ++ A P P A
Sbjct: 239 PDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPAS 298
Query: 245 PTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGAR 304
L+ G++ +D+ LWEINEAF+VVVL IK+L +DP VN+ GGA+++GHP+G +GAR
Sbjct: 299 KKALEKAGLSVKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGAR 358
Query: 305 IV 306
IV
Sbjct: 359 IV 360
Score = 150 bits (380), Expect = 2e-39
Identities = 84/303 (27%), Positives = 148/303 (48%), Gaps = 38/303 (12%)
Query: 379 DVFIVSGSRTPMGSFRSS------LVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNV 432
DV++V +RT FR ++ +L A+ I I+K + ++ ++ G
Sbjct: 3 DVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCA 62
Query: 433 CQAG----LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 488
Q G G R + A LP + V++ CAS + + + + ++ G D+++A
Sbjct: 63 LQVGENWLYGG---RHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIA 119
Query: 489 GGMESMSNVPFYLN---------RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTA 539
GG+E M+ P N + KY +L G V MG AE A
Sbjct: 120 GGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYV------------MGLTAEKLA 167
Query: 540 KKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-I 598
++ I R+E D ++L S++ +A A + F +I+P+ + + +GK +V+ D+ +
Sbjct: 168 EEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEV-EVEGK-KKVVDVDQSVRPDT 225
Query: 599 NFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAA 658
+ EK L F K +G +TAGN+S LN GA+ +LM+++AV+K+ KP+A+I ++ A
Sbjct: 226 SLEKLAKLPPAF-KPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAG 284
Query: 659 TEP 661
P
Sbjct: 285 VPP 287
>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional.
Length = 399
Score = 218 bits (557), Expect = 2e-63
Identities = 115/313 (36%), Positives = 175/313 (55%), Gaps = 18/313 (5%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R + AGLP S TVN+ CASG++A+ +A+ + +G DVM+A G+ESMS VP
Sbjct: 74 RIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMM-- 131
Query: 75 RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSAD 134
G + ++ +V MG AE A+++ +SR++QD +AL S++K+
Sbjct: 132 ------GNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAIA 185
Query: 135 AYKNNVFSSQIVPVSIPQRK-----GKADI---IVNEDEEYKK-INFEKFKSLATVFQKE 185
A + F +I P I +R G+ D+ V+ DE + + E L VF +
Sbjct: 186 AQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANK 245
Query: 186 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIP 245
G+VTAGN+S +DGA A +L++E+A+++FN PLAR +++ A P I P AIP
Sbjct: 246 -GSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIP 304
Query: 246 TLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARI 305
LK G+ + D+ E+NEAF+ LA I+ L +DPSKVN GGA++LGHP+G +GA
Sbjct: 305 AALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIR 364
Query: 306 VIHLCHALKSGQK 318
+ H L+
Sbjct: 365 TATVVHGLRRTNL 377
Score = 169 bits (430), Expect = 5e-46
Identities = 105/318 (33%), Positives = 167/318 (52%), Gaps = 29/318 (9%)
Query: 379 DVFIVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQKA-NMDKSDVQEVYMGNVC--- 433
D +IV+ +RTP+G + R + L A + SA+ + +D +++ +G C
Sbjct: 7 DAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVG--CAMP 64
Query: 434 --QAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGM 491
+ GL A R + AGLP S TVN+ CASG++A+ +A+ + +G DVM+A G+
Sbjct: 65 EAEQGLNVA--RIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGV 122
Query: 492 ESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDE 551
ESMS VP G + ++ +V MG AE A+++ +SR++QD
Sbjct: 123 ESMSMVPMM--------GNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDA 174
Query: 552 YALSSYKKSADAYKNNVFSSQIVPVSIPQRK-----GKADI---IVNEDEEYKK-INFEK 602
+AL S++K+ A + F +I P I +R G+ D+ V+ DE + + E
Sbjct: 175 FALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEG 234
Query: 603 FKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI 662
L VF + G+VTAGN+S +DGA A +L++E+A+++FN PLAR +++ A P
Sbjct: 235 LAKLKPVFANK-GSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPE 293
Query: 663 DFPIAPAFAIPTLLKNGG 680
I P AIP LK G
Sbjct: 294 IMGIGPIEAIPAALKQAG 311
>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional.
Length = 401
Score = 212 bits (542), Expect = 2e-61
Identities = 115/321 (35%), Positives = 174/321 (54%), Gaps = 20/321 (6%)
Query: 1 MGNVCQAGL-GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
+G QAG + R A++ AGLP + TVN++CASG+ A++ A++ ++ G D+ +
Sbjct: 53 LGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYL 112
Query: 60 AGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDG----------LSDVYNKIHMGNCAEN 109
AGG+ESMS PF + + E+ + D V+D + Y M +N
Sbjct: 113 AGGVESMSRAPFVMGKAESAFSR----DAKVFDTTIGARFPNPKIVAQYGNDSMPETGDN 168
Query: 110 TAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK- 168
A +F ISR++ D +A S K A + F+ +I P+ +PQ + +V EDE +
Sbjct: 169 VAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRP 228
Query: 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFD 228
E L +F E G VTAGNAS +NDGAAA ++ + A K+ KP+ARI++
Sbjct: 229 SSTVEALTKLKPLF--EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAA 286
Query: 229 AATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDI--DPSKVN 286
A EP I P AI L G+ D+ + EINEAF+ VL +K L + D +VN
Sbjct: 287 AGVEPRIMGIGPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVN 346
Query: 287 VHGGAVSLGHPIGMSGARIVI 307
+GGA+++GHP+G SGAR+ +
Sbjct: 347 PNGGAIAVGHPLGASGARLAL 367
Score = 176 bits (449), Expect = 1e-48
Identities = 104/314 (33%), Positives = 159/314 (50%), Gaps = 18/314 (5%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL- 437
D +I G R+P G +L S+ L A I ++K+ D+++V +G QAG
Sbjct: 3 DAYIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGED 62
Query: 438 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 497
+ R A++ AGLP + TVN++CASG+ A++ A++ ++ G D+ +AGG+ESMS
Sbjct: 63 SRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRA 122
Query: 498 PFYLNRGETKYGGMNLIDGIVYDG----------LSDVYNKIHMGNCAENTAKKFNISRD 547
PF + + E+ + D V+D + Y M +N A +F ISR+
Sbjct: 123 PFVMGKAESAFSR----DAKVFDTTIGARFPNPKIVAQYGNDSMPETGDNVAAEFGISRE 178
Query: 548 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSL 606
+ D +A S K A + F+ +I P+ +PQ + +V EDE + E L
Sbjct: 179 DADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKL 238
Query: 607 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 666
+F E G VTAGNAS +NDGAAA ++ + A K+ KP+ARI++ A EP I
Sbjct: 239 KPLF--EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGI 296
Query: 667 APAFAIPTLLKNGG 680
P AI L G
Sbjct: 297 GPVEAIKKALARAG 310
>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional.
Length = 391
Score = 210 bits (537), Expect = 8e-61
Identities = 109/308 (35%), Positives = 169/308 (54%), Gaps = 19/308 (6%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R AGLP + T+N+ C+SG+++I ++ + LGH + ++AGG ESMS VP
Sbjct: 69 RNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMM-- 126
Query: 75 RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSAD 134
G L++ + Y + MG+ AE A K+ ISR++QD +A+ S++++A
Sbjct: 127 -GHVVRPNPRLVEAA-----PEYY--MGMGHTAEQVAVKYGISREDQDAFAVRSHQRAAK 178
Query: 135 AYKNNVFSSQIVPVSIPQRKGKAD-------IIVNEDEEYK-KINFEKFKSLATVFQKEN 186
A F+ +IVPV + R + I ++DE + E L F
Sbjct: 179 ALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNV-K 237
Query: 187 GTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPT 246
G+VTAGN+S ++DGAAA +LM E KPLA+ ++ A P I P AIP
Sbjct: 238 GSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPK 297
Query: 247 LLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIV 306
LK G+ D+ L+E+NEAF+ + I++L +D KVNV+GGA++LGHP+G +GA++
Sbjct: 298 ALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLT 357
Query: 307 IHLCHALK 314
+ L H +K
Sbjct: 358 LSLIHEMK 365
Score = 163 bits (415), Expect = 5e-44
Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 25/311 (8%)
Query: 382 IVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVC---QAGL 437
IV+G+RTP+G + + SL ++ LGA+ ++ +++A + + ++ +G C +A
Sbjct: 6 IVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIG--CAMPEAEQ 63
Query: 438 GQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 497
G R AGLP + T+N+ C+SG+++I ++ + LGH + ++AGG ESMS V
Sbjct: 64 GLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLV 123
Query: 498 PFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSY 557
P G L++ + Y + MG+ AE A K+ ISR++QD +A+ S+
Sbjct: 124 PMM---GHVVRPNPRLVEAA-----PEYY--MGMGHTAEQVAVKYGISREDQDAFAVRSH 173
Query: 558 KKSADAYKNNVFSSQIVPVSIPQRKGKAD-------IIVNEDEEYK-KINFEKFKSLATV 609
+++A A F+ +IVPV + R + I ++DE + E L
Sbjct: 174 QRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPA 233
Query: 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPA 669
F G+VTAGN+S ++DGAAA +LM E KPLA+ ++ A P I P
Sbjct: 234 FNV-KGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPI 292
Query: 670 FAIPTLLKNGG 680
AIP LK G
Sbjct: 293 AAIPKALKLAG 303
>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional.
Length = 426
Score = 204 bits (520), Expect = 4e-58
Identities = 115/343 (33%), Positives = 169/343 (49%), Gaps = 49/343 (14%)
Query: 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFY 72
R + G + TV + CASGM+A+ A+ ++LG D+++AGG+E+MS+ P
Sbjct: 66 IARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLL 125
Query: 73 LNRGETKY-GGMNLIDGIV--------------------YDGLSDVYNKIHMGNCAENTA 111
+ ++ G I GL+D ++MG AE A
Sbjct: 126 FSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTDPVVGLNMGQTAEVLA 185
Query: 112 KKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGK---ADIIVNEDEEYK 168
+F I+R++ D YA S+++ A A ++VP + R GK D V D
Sbjct: 186 HRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVP--LFDRDGKFYDHDDGVRPDS--- 239
Query: 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFD 228
+ EK L F + G VTAGN+S + DGA +L +EEAV+K+ PL RI+
Sbjct: 240 --SMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQW 297
Query: 229 AATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLD--------- 279
AA +P + P A LL+ G+ +D+ LWEINEAF+ VLA +
Sbjct: 298 AALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCREQL 357
Query: 280 --------IDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
+D ++NV GGA++LGHP+G SGARIV+HL HALK
Sbjct: 358 GLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALK 400
Score = 138 bits (351), Expect = 3e-35
Identities = 95/323 (29%), Positives = 146/323 (45%), Gaps = 32/323 (9%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
V+IV G+RTP R SA+ L A + + + D+ EV +G +
Sbjct: 4 PVYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDE 63
Query: 439 QAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
R + G + TV + CASGM+A+ A+ ++LG D+++AGG+E+MS+ P
Sbjct: 64 ANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAP 123
Query: 499 FYLNRGETKY-GGMNLIDGIV--------------------YDGLSDVYNKIHMGNCAEN 537
+ ++ G I GL+D ++MG AE
Sbjct: 124 LLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTDPVVGLNMGQTAEV 183
Query: 538 TAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGK---ADIIVNEDEE 594
A +F I+R++ D YA S+++ A A ++VP + R GK D V D
Sbjct: 184 LAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVP--LFDRDGKFYDHDDGVRPDS- 239
Query: 595 YKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAY 654
+ EK L F + G VTAGN+S + DGA +L +EEAV+K+ PL RI+
Sbjct: 240 ----SMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDS 295
Query: 655 FDAATEPIDFPIAPAFAIPTLLK 677
AA +P + P A LL+
Sbjct: 296 QWAALDPSQMGLGPVHAATPLLQ 318
>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase.
Length = 452
Score = 203 bits (517), Expect = 2e-57
Identities = 112/320 (35%), Positives = 173/320 (54%), Gaps = 18/320 (5%)
Query: 2 GNVCQAGLGQA-PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
G V G +A CR A +AG P++ TVN+ C+SG++A+ + + G D+ +
Sbjct: 99 GTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIG 158
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
G+ESM+ P GG+N + + MG +EN A++F ++R+E
Sbjct: 159 AGVESMTTNPMAWE------GGVNPRVESFSQAQDCL---LPMGITSENVAERFGVTREE 209
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSI----PQRKGKADIIVNEDEEYK-KINFEKF 175
QD+ A+ S++K+A A + F +IVPV P+ + I+++ D+ +
Sbjct: 210 QDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADL 269
Query: 176 KSLATVFQKENGTVTAGNASTLNDGAAACVLMT-EEAVRKFNAKPLARIIAYFDAATEPI 234
L VF K+NGT TAGN+S ++DGA A +LM A++K L ++ +P
Sbjct: 270 AKLKPVF-KKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQK-GLPILGVFRSFAAVGVDPA 327
Query: 235 DFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSL 294
I PA AIP +K G+ D+ L+EINEAF+ + KKL +DP KVNV+GGA++L
Sbjct: 328 VMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIAL 387
Query: 295 GHPIGMSGARIVIHLCHALK 314
GHP+G +GAR V L H +K
Sbjct: 388 GHPLGATGARCVATLLHEMK 407
Score = 158 bits (401), Expect = 1e-41
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 19/326 (5%)
Query: 363 LAPDAKASRNFASKPGDVFIVSGSRTPM-GSFRSSLVSLSATKLGAVAIESAIQKANMDK 421
A D+ A + DV IV+ RTP+ + R L A +++ ++K ++
Sbjct: 31 AAGDSAAYHRTTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNP 90
Query: 422 SDVQEVYMGNVCQAGLGQA-PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSL 480
S+V ++ +G V G +A CR A +AG P++ TVN+ C+SG++A+ + +
Sbjct: 91 SEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKA 150
Query: 481 GHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAK 540
G D+ + G+ESM+ P GG+N + + MG +EN A+
Sbjct: 151 GFYDIGIGAGVESMTTNPMAWE------GGVNPRVESFSQAQDCL---LPMGITSENVAE 201
Query: 541 KFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSI----PQRKGKADIIVNEDEEYK 596
+F ++R+EQD+ A+ S++K+A A + F +IVPV P+ + I+++ D+ +
Sbjct: 202 RFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIR 261
Query: 597 -KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMT-EEAVRKFNAKPLARIIAY 654
L VF K+NGT TAGN+S ++DGA A +LM A++K L ++
Sbjct: 262 PNTTLADLAKLKPVF-KKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQK-GLPILGVFRSF 319
Query: 655 FDAATEPIDFPIAPAFAIPTLLKNGG 680
+P I PA AIP +K G
Sbjct: 320 AAVGVDPAVMGIGPAVAIPAAVKAAG 345
>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional.
Length = 390
Score = 198 bits (504), Expect = 3e-56
Identities = 107/322 (33%), Positives = 171/322 (53%), Gaps = 18/322 (5%)
Query: 1 MGNVCQAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
MG V Q G R AV+ + LP+S T++++ C S +A+ A+Q + G D+++
Sbjct: 53 MGCVSQVGEQATNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVI 112
Query: 60 AGGMESMSNVPFYLNRGETKYGGMNLIDGIVY--DGLSDVYNKIH----MGNCAENTAKK 113
A G+ESM+ VP G+ Y G+ + Y I G AE AKK
Sbjct: 113 AAGVESMTRVPMGSPSTLPAKNGLG-----HYKSPGMEERYPGIQFSQFTG--AEMMAKK 165
Query: 114 FNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI-IVNEDEEYKKINF 172
+ +S+D+ DE+AL S++++ A + F ++IVP+ I + G ++ V+E +
Sbjct: 166 YGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFD-ATL 224
Query: 173 EKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATE 232
E + + E G +TA AS + DGA+ +++ E ++ KPLARI +
Sbjct: 225 EGIAGVKLI--AEGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGD 282
Query: 233 PIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAV 292
P+ AP A LK G+ D+ L+E+NEAF+ V LA +K DP ++NV+GGA+
Sbjct: 283 PVIMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGAI 342
Query: 293 SLGHPIGMSGARIVIHLCHALK 314
+LGHP+G SG +++ L HALK
Sbjct: 343 ALGHPLGASGTKLMTTLVHALK 364
Score = 141 bits (357), Expect = 2e-36
Identities = 87/308 (28%), Positives = 149/308 (48%), Gaps = 18/308 (5%)
Query: 381 FIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAG-LGQ 439
+IV+ +RT G L L A +++ + ++ D + +++V MG V Q G
Sbjct: 5 YIVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQAT 64
Query: 440 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPF 499
R AV+ + LP+S T++++ C S +A+ A+Q + G D+++A G+ESM+ VP
Sbjct: 65 NVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPM 124
Query: 500 YLNRGETKYGGMNLIDGIVY--DGLSDVYNKIH----MGNCAENTAKKFNISRDEQDEYA 553
G+ Y G+ + Y I G AE AKK+ +S+D+ DE+A
Sbjct: 125 GSPSTLPAKNGLG-----HYKSPGMEERYPGIQFSQFTG--AEMMAKKYGLSKDQLDEFA 177
Query: 554 LSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADI-IVNEDEEYKKINFEKFKSLATVFQK 612
L S++++ A + F ++IVP+ I + G ++ V+E + E + +
Sbjct: 178 LQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRF-DATLEGIAGVKLI--A 234
Query: 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAI 672
E G +TA AS + DGA+ +++ E ++ KPLARI +P+ AP A
Sbjct: 235 EGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPAT 294
Query: 673 PTLLKNGG 680
LK G
Sbjct: 295 ERALKKAG 302
>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional.
Length = 361
Score = 191 bits (488), Expect = 2e-54
Identities = 105/311 (33%), Positives = 151/311 (48%), Gaps = 32/311 (10%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+GNV G G R + + AGL T+++ C +G++AI A + G +A
Sbjct: 49 LGNV--VGPGGNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIA 106
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GG+ES S PF NR + MG AE A+++NI+R+
Sbjct: 107 GGVESTSTSPFQ-NRARFS---------------PETIGDPDMGVAAEYVAERYNITREM 150
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI-NFEKFKSLA 179
QDEYA SYK++ A + +I+ + DE KK N+E+
Sbjct: 151 QDEYACLSYKRTLQALEKGYIHEEILSFN-----------GLLDESIKKEMNYERIIKRT 199
Query: 180 T-VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 238
F NGTVTAGN+ +NDGA A ++M E RK KP+ R + +P
Sbjct: 200 KPAFLH-NGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGT 258
Query: 239 APAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPI 298
P FA+ LL + +D+ +EINEAF+ V+A K+L I K+NV+GGA++LGHP
Sbjct: 259 GPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPY 318
Query: 299 GMSGARIVIHL 309
G SGA +V L
Sbjct: 319 GASGAMLVTRL 329
Score = 137 bits (348), Expect = 2e-35
Identities = 88/298 (29%), Positives = 130/298 (43%), Gaps = 35/298 (11%)
Query: 382 IVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAP 441
IV RTP+G L +L A + M++ ++ +V +GNV G G
Sbjct: 5 IVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFL--SKGMER-EIDDVILGNV--VGPGGNV 59
Query: 442 CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYL 501
R + + AGL T+++ C +G++AI A + G +AGG+ES S PF
Sbjct: 60 ARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQ- 118
Query: 502 NRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSA 561
NR + MG AE A+++NI+R+ QDEYA SYK++
Sbjct: 119 NRARFS---------------PETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTL 163
Query: 562 DAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKI-NFEKFKSLAT-VFQKENGTVTA 619
A + +I+ + DE KK N+E+ F NGTVTA
Sbjct: 164 QALEKGYIHEEILSFN-----------GLLDESIKKEMNYERIIKRTKPAFLH-NGTVTA 211
Query: 620 GNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLK 677
GN+ +NDGA A ++M E RK KP+ R + +P P FA+ LL
Sbjct: 212 GNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLN 269
>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional.
Length = 382
Score = 189 bits (482), Expect = 3e-53
Identities = 107/327 (32%), Positives = 170/327 (51%), Gaps = 38/327 (11%)
Query: 1 MGNVCQAGLGQAP--CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVM 58
G V G QA R + + AGLP+ TV++ C S +AI A+Q + G QD++
Sbjct: 53 FGCVDTIG-PQAGNIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLV 111
Query: 59 VAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYN------------KIHMGNC 106
VAGG+++MS +P + G G + + ++
Sbjct: 112 VAGGVQNMSQIPI----------SSAMTAGEQL-GFTSPFAESKGWLHRYGDQEVSQFRG 160
Query: 107 AENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE 166
AE A+K+ ISR+E + +AL S++++ A + F ++IVPV + V DE
Sbjct: 161 AELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPV--------GGVTV--DEG 210
Query: 167 YKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAY 226
++ + EK L + E G +TA AS ++DGA+A +L +E AV++ P ARI
Sbjct: 211 PRETSLEKMAGLKPLV--EGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHL 268
Query: 227 FDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVN 286
+P+ AP A L+ G++ D+ + EINEAF+ VVLA +K+ DP+KVN
Sbjct: 269 SVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDVVEINEAFAPVVLAWLKETGADPAKVN 328
Query: 287 VHGGAVSLGHPIGMSGARIVIHLCHAL 313
+GGA++LGHP+G +GA+++ L H L
Sbjct: 329 PNGGAIALGHPLGATGAKLMTTLLHEL 355
Score = 147 bits (373), Expect = 1e-38
Identities = 90/316 (28%), Positives = 149/316 (47%), Gaps = 38/316 (12%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
+ +IV RTP+G + L + LGA ++ + + +D + V +V G V G
Sbjct: 3 EAYIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIG-P 61
Query: 439 QAP--CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
QA R + + AGLP+ TV++ C S +AI A+Q + G QD++VAGG+++MS
Sbjct: 62 QAGNIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQ 121
Query: 497 VPFYLNRGETKYGGMNLIDGIVYDGLSDVYN------------KIHMGNCAENTAKKFNI 544
+P + G G + + ++ AE A+K+ I
Sbjct: 122 IPI----------SSAMTAGEQL-GFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGI 170
Query: 545 SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFK 604
SR+E + +AL S++++ A + F ++IVPV + V DE ++ + EK
Sbjct: 171 SREEMERFALESHRRAFAAIRAGRFDNEIVPV--------GGVTV--DEGPRETSLEKMA 220
Query: 605 SLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF 664
L + E G +TA AS ++DGA+A +L +E AV++ P ARI +P+
Sbjct: 221 GLKPLV--EGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFM 278
Query: 665 PIAPAFAIPTLLKNGG 680
AP A L+ G
Sbjct: 279 LTAPIPATRYALEKTG 294
>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 387
Score = 185 bits (473), Expect = 5e-52
Identities = 105/298 (35%), Positives = 158/298 (53%), Gaps = 22/298 (7%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R A + AG+P S TVN++C S M+A+ A++ + G DV + GG+E M +VP
Sbjct: 70 RNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVP---- 125
Query: 75 RGETKYGGMNLIDGIVYD-GLSDVYNKIH--MGNCAENTAKKFNISRDEQDEYALSSYKK 131
MN G+ + GLS K MG AE K ISR++QD +A S+++
Sbjct: 126 --------MN--HGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGISREQQDAFAARSHQR 175
Query: 132 SADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKENGTVT 190
+ A + F ++I+P G + + DE + + E +L F NGTVT
Sbjct: 176 AWAATQEGRFKNEIIPTEGHDADG-VLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVT 234
Query: 191 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKN 250
AG +S L+DGA+A ++M+E ++ KP ARI + A +P P A LK
Sbjct: 235 AGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKR 294
Query: 251 GGVAKQDVALWEINEAFSVVVLANIKKL---DIDPSKVNVHGGAVSLGHPIGMSGARI 305
G++ D+ ++E+NEAF+ L +K L D KVN++GGA++LGHP+G SGARI
Sbjct: 295 AGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARI 352
Score = 147 bits (374), Expect = 1e-38
Identities = 93/290 (32%), Positives = 144/290 (49%), Gaps = 34/290 (11%)
Query: 377 PGDVFIVSGSRTPM-----GSFRSSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEVYMG 430
DV IV RTPM G+FR+ + A L A + S + + +D +++ ++ G
Sbjct: 1 MEDVVIVDAIRTPMGRSKGGAFRN----VRAEDLSAHLMRSLLARNPALDPAEIDDIIWG 56
Query: 431 NVCQA---GLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 487
V Q G A R A + AG+P S TVN++C S M+A+ A++ + G DV +
Sbjct: 57 CVQQTLEQGFNIA--RNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFL 114
Query: 488 AGGMESMSNVPFYLNRGETKYGGMNLIDGIVYD-GLSDVYNKIH--MGNCAENTAKKFNI 544
GG+E M +VP MN G+ + GLS K MG AE K I
Sbjct: 115 IGGVEHMGHVP------------MN--HGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGI 160
Query: 545 SRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKF 603
SR++QD +A S++++ A + F ++I+P G + + DE + + E
Sbjct: 161 SREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADG-VLKLFDYDEVIRPETTVEAL 219
Query: 604 KSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIA 653
+L F NGTVTAG +S L+DGA+A ++M+E ++ KP ARI +
Sbjct: 220 AALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRS 269
>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional.
Length = 406
Score = 184 bits (468), Expect = 5e-51
Identities = 109/303 (35%), Positives = 159/303 (52%), Gaps = 25/303 (8%)
Query: 30 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS--------------NVPFYLNR 75
TTVN+ C+S ++ +A + G DV ++ G+E++S N F +
Sbjct: 84 TTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQ 143
Query: 76 GET----KYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKK 131
T + G D L DVY I MG AEN A+ ISR+EQDE+ + S +
Sbjct: 144 ARTAARAEGGAEAWHDPREDGLLPDVY--IAMGQTAENVAQLTGISREEQDEWGVRSQNR 201
Query: 132 SADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTA 191
+ +A N F +I PV++P ++ +D +EK L VF + +GTVTA
Sbjct: 202 AEEAIANGFFEREITPVTLPD----GTVVSTDDGPRAGTTYEKVSQLKPVF-RPDGTVTA 256
Query: 192 GNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNG 251
GNA LNDGAAA V+M++ R+ PLARI++ + P + P A L
Sbjct: 257 GNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQALARA 316
Query: 252 GVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCH 311
G++ D+ L EINEAF+ VL + ++L ID K+NV GGA++LGHP GM+GARI L +
Sbjct: 317 GMSIDDIDLVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLN 376
Query: 312 ALK 314
L+
Sbjct: 377 NLQ 379
Score = 127 bits (322), Expect = 1e-31
Identities = 94/297 (31%), Positives = 146/297 (49%), Gaps = 37/297 (12%)
Query: 382 IVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQKA-NMDKSDVQEVYMGNVC-----Q 434
IVS +R+P+G +F+ SL + L A + +A+ K +D +D+ ++ +G C +
Sbjct: 6 IVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLG--CGLPGGE 63
Query: 435 AGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494
G A R + G TTVN+ C+S ++ +A + G DV ++ G+E++
Sbjct: 64 QGFNMA--RVVAVLLGYD-FLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETV 120
Query: 495 S--------------NVPFYLNRGET----KYGGMNLIDGIVYDGLSDVYNKIHMGNCAE 536
S N F + T + G D L DVY I MG AE
Sbjct: 121 SRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLPDVY--IAMGQTAE 178
Query: 537 NTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK 596
N A+ ISR+EQDE+ + S ++ +A N F +I PV++P ++ +D
Sbjct: 179 NVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPD----GTVVSTDDGPRA 234
Query: 597 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIA 653
+EK L VF + +GTVTAGNA LNDGAAA V+M++ R+ PLARI++
Sbjct: 235 GTTYEKVSQLKPVF-RPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVS 290
>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated.
Length = 402
Score = 180 bits (460), Expect = 6e-50
Identities = 104/329 (31%), Positives = 162/329 (49%), Gaps = 38/329 (11%)
Query: 1 MGNVCQAGLGQAPC--RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVM 58
+G V G Q R AV+ AGLP++ +N+ CASG++A+ LA+ + G D++
Sbjct: 55 LGCVTPVG-DQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLV 113
Query: 59 VAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISR 118
+AGG+ESMS VP + G + + + G A+ A K+ SR
Sbjct: 114 IAGGVESMSRVPMGSDGG-----AWAMDPSTNFP-----TYFVPQGISADLIATKYGFSR 163
Query: 119 DEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKS 177
++ D YA+ S +++A A+ F+ +VPV + I++ DE + E
Sbjct: 164 EDVDAYAVESQQRAAAAWAEGYFAKSVVPV----KDQNGLTILDHDEHMRPGTTMESLAK 219
Query: 178 LATVFQ--------------------KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNA 217
L F + N AGN+S + DGAAA ++ +EEA +
Sbjct: 220 LKPSFAMMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGL 279
Query: 218 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKK 277
KP ARI+A ++P P A L G+ D+ L+E+NEAF+ VVL ++
Sbjct: 280 KPRARIVATATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQA 339
Query: 278 LDIDPSKVNVHGGAVSLGHPIGMSGARIV 306
LDI KVNV+GGA+++GHP+G +GA I+
Sbjct: 340 LDIPHDKVNVNGGAIAMGHPLGATGAMIL 368
Score = 128 bits (325), Expect = 5e-32
Identities = 90/327 (27%), Positives = 145/327 (44%), Gaps = 40/327 (12%)
Query: 379 DVFIVSGSRTPMGSFRS--SLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAG 436
+ +I RTP G + SL + +L A +E+ + +D + V +V +G V G
Sbjct: 3 EAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVG 62
Query: 437 LGQAPC--RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494
Q R AV+ AGLP++ +N+ CASG++A+ LA+ + G D+++AGG+ESM
Sbjct: 63 -DQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESM 121
Query: 495 SNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYAL 554
S VP + G + + + G A+ A K+ SR++ D YA+
Sbjct: 122 SRVPMGSDG-----GAWAMDPSTNFP-----TYFVPQGISADLIATKYGFSREDVDAYAV 171
Query: 555 SSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK-INFEKFKSLATVFQ-- 611
S +++A A+ F+ +VPV + I++ DE + E L F
Sbjct: 172 ESQQRAAAAWAEGYFAKSVVPV----KDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMM 227
Query: 612 ------------------KENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIA 653
+ N AGN+S + DGAAA ++ +EEA + KP ARI+A
Sbjct: 228 GEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVA 287
Query: 654 YFDAATEPIDFPIAPAFAIPTLLKNGG 680
++P P A L G
Sbjct: 288 TATIGSDPTIMLTGPVPATRKALAKAG 314
>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional.
Length = 387
Score = 175 bits (445), Expect = 4e-48
Identities = 108/327 (33%), Positives = 156/327 (47%), Gaps = 35/327 (10%)
Query: 2 GNVCQAG-LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
G V QAG R A + AGLP TT++ C S +A L + ++ G DV +A
Sbjct: 54 GCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIA 113
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNK---IHMGN---CAENTAKKF 114
G+E+MS VP N G I M N AE AK+
Sbjct: 114 CGVEAMSRVPLGAN---------------AGPGRGLPRPDSWDIDMPNQFEAAERIAKRR 158
Query: 115 NISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKA-----DIIVNEDEEYKK 169
I+R++ D + L S +++A A+ F +I PV P + +V D+ +
Sbjct: 159 GITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRD 218
Query: 170 INFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDA 229
E L V E G TAG +S ++DGAAA + M E+ R +P ARI+A
Sbjct: 219 TTMEGLAGLKPVL--EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALV 276
Query: 230 ATEP---IDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVN 286
EP +D P+ A +L+ G+ D+ L EINEAF+ VVL+ + + D KVN
Sbjct: 277 GAEPYYHLDGPVQ---ATAKVLEKAGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDKVN 333
Query: 287 VHGGAVSLGHPIGMSGARIVIHLCHAL 313
V+GGA++LGHP+G +GAR++ H L
Sbjct: 334 VNGGAIALGHPVGSTGARLITTALHEL 360
Score = 137 bits (346), Expect = 7e-35
Identities = 92/304 (30%), Positives = 134/304 (44%), Gaps = 32/304 (10%)
Query: 378 GDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAG- 436
G+ IV RTP+G L L A +L + + +A +D DV++V G V QAG
Sbjct: 2 GNPVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGE 61
Query: 437 LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
R A + AGLP TT++ C S +A L + ++ G DV +A G+E+MS
Sbjct: 62 QSNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSR 121
Query: 497 VPFYLNRGETKYGGMNLIDGIVYDGLSDVYNK---IHMGN---CAENTAKKFNISRDEQD 550
VP N G I M N AE AK+ I+R++ D
Sbjct: 122 VPLGAN---------------AGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVD 166
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKA-----DIIVNEDEEYKKINFEKFKS 605
+ L S +++A A+ F +I PV P + +V D+ + E
Sbjct: 167 AFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAG 226
Query: 606 LATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEP---I 662
L V E G TAG +S ++DGAAA + M E+ R +P ARI+A EP +
Sbjct: 227 LKPVL--EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHL 284
Query: 663 DFPI 666
D P+
Sbjct: 285 DGPV 288
>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 428
Score = 174 bits (443), Expect = 2e-47
Identities = 96/344 (27%), Positives = 165/344 (47%), Gaps = 45/344 (13%)
Query: 11 QAP--CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68
+AP R+ V+ G+ T +V++ CA+ +A+ ++++ G D+ +AGG +S S
Sbjct: 64 EAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSV 123
Query: 69 VPFY-----------LNRGETKYGGMNLIDGI-------VYDGLSDVYNKIHMGNCAENT 110
+P LN+ T + L + V +++ + MG+ AE
Sbjct: 124 LPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAEQM 183
Query: 111 AKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKA--DIIVNEDEEYK 168
AK + ISR+EQD A S++ +A A+ +++ +P K D + D
Sbjct: 184 AKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRGDST-- 241
Query: 169 KINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFD 228
E + L F +++GTVTA N++ L DGAAA +LM+E + PL + +Y
Sbjct: 242 ---LEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAF 298
Query: 229 AATEPI-DFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKL--------- 278
AA + D + PA+A P L+ G+ D+ L +++EAF+ LAN++
Sbjct: 299 AAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREK 358
Query: 279 --------DIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
++D SK NV GG+++ GHP +GAR++ H L+
Sbjct: 359 LGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELR 402
Score = 147 bits (373), Expect = 3e-38
Identities = 87/330 (26%), Positives = 155/330 (46%), Gaps = 30/330 (9%)
Query: 374 ASKPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVC 433
+ + IVSG RTP ++ + A LG + + + ++ +D ++++ G V
Sbjct: 1 TRQGDRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVV 60
Query: 434 QAGLGQAP--CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGM 491
Q + +AP R+ V+ G+ T +V++ CA+ +A+ ++++ G D+ +AGG
Sbjct: 61 Q--MPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGA 118
Query: 492 ESMSNVPFY-----------LNRGETKYGGMNLIDGI-------VYDGLSDVYNKIHMGN 533
+S S +P LN+ T + L + V +++ + MG+
Sbjct: 119 DSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGD 178
Query: 534 CAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKA--DIIVNE 591
AE AK + ISR+EQD A S++ +A A+ +++ +P K D +
Sbjct: 179 TAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRG 238
Query: 592 DEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARI 651
D E + L F +++GTVTA N++ L DGAAA +LM+E + PL +
Sbjct: 239 DST-----LEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYL 293
Query: 652 IAYFDAATEPI-DFPIAPAFAIPTLLKNGG 680
+Y AA + D + PA+A P L+ G
Sbjct: 294 RSYAFAAIDVWQDMLLGPAYATPLALERAG 323
>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA. This
subunit of the FadBA complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit. This protein is almost always located
adjacent to FadB (TIGR02437). The FadBA complex is the
major complex active for beta-oxidation of fatty acids
in E. coli [Fatty acid and phospholipid metabolism,
Degradation].
Length = 385
Score = 164 bits (417), Expect = 2e-44
Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 32/312 (10%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPF--- 71
R A + A +P ++ TVN++C S M+A+ A++ + G DV + GG+E M +VP
Sbjct: 68 RNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHG 127
Query: 72 -----YLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYAL 126
++ K GM MG AE K ISR++QD +A
Sbjct: 128 VDFHPGMSLHVAKAAGM-------------------MGLTAEMLGKMHGISREQQDAFAA 168
Query: 127 SSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQKE 185
S+ ++ A + F ++I+P G + DE + + E +L F +
Sbjct: 169 RSHARAHAATQEGKFKNEIIPTQGHDADGFLKQF-DYDEVIRPETTVESLAALRPAFDPK 227
Query: 186 NGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFAIP 245
NGTVTAG +S L+DGA+A ++M+E+ + KP ARI + A +P P A
Sbjct: 228 NGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQ 287
Query: 246 TLLKNGGVAKQDVALWEINEAFSVVVLANIKKL---DIDPSKVNVHGGAVSLGHPIGMSG 302
LK G++ D+ ++E+NEAF+ L +K L D KVN++GGA++LGHP+G SG
Sbjct: 288 KALKRAGLSISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSG 347
Query: 303 ARIVIHLCHALK 314
ARI L + ++
Sbjct: 348 ARISTTLLNLME 359
Score = 126 bits (319), Expect = 2e-31
Identities = 92/314 (29%), Positives = 144/314 (45%), Gaps = 32/314 (10%)
Query: 379 DVFIVSGSRTPMGSFRSSLV-SLSATKLGAVAIESAIQK-ANMDKSDVQEVYMGNVCQA- 435
DV IV RTPMG + + A L A + + + +D ++V+++Y G V Q
Sbjct: 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60
Query: 436 GLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495
G R A + A +P ++ TVN++C S M+A+ A++ + G DV + GG+E M
Sbjct: 61 EQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMG 120
Query: 496 NVPF--------YLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 547
+VP ++ K GM MG AE K ISR+
Sbjct: 121 HVPMMHGVDFHPGMSLHVAKAAGM-------------------MGLTAEMLGKMHGISRE 161
Query: 548 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSL 606
+QD +A S+ ++ A + F ++I+P G + DE + + E +L
Sbjct: 162 QQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQF-DYDEVIRPETTVESLAAL 220
Query: 607 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI 666
F +NGTVTAG +S L+DGA+A ++M+E+ + KP ARI + A +P
Sbjct: 221 RPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGY 280
Query: 667 APAFAIPTLLKNGG 680
P A LK G
Sbjct: 281 GPVPATQKALKRAG 294
>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional.
Length = 427
Score = 163 bits (416), Expect = 7e-44
Identities = 116/389 (29%), Positives = 175/389 (44%), Gaps = 87/389 (22%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP---- 70
R+ V+ + L T + + C +G++A +L + ++LG D +AGG+++ S+ P
Sbjct: 72 RECVLGSALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVN 131
Query: 71 -------FYLNRGETKYGGMNLIDGIV--------------YDGLSDVYNKIHMGNCAEN 109
LNR +T + + + GLS MG A
Sbjct: 132 EGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLS-------MGEHAAI 184
Query: 110 TAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 169
TAK++ ISR+ QDE A +S++ A AY F I P R D + D
Sbjct: 185 TAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTR----DNNLRPD----- 235
Query: 170 INFEKFKSLATVFQK-ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFD 228
+ EK L VF K T+TAGN++ L DGA+ +L +EE + LA ++ D
Sbjct: 236 SSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLV---D 292
Query: 229 AATEPIDFP-------IAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKK---- 277
A T +DF +APA+A+P LL G+ QD +EI+EAF+ VLA +K
Sbjct: 293 AETAAVDFVHGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDE 352
Query: 278 --------LD-----IDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHAL--KSGQKGQLS 322
LD ID SK+NV+G +++ GHP +G RIV L L K +G +S
Sbjct: 353 EYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAEKGSGRGLIS 412
Query: 323 QFWYDENTTQRLSEEVVCRAGKEGSIALI 351
+C AG +G A++
Sbjct: 413 ----------------ICAAGGQGVTAIL 425
Score = 114 bits (289), Expect = 4e-27
Identities = 83/281 (29%), Positives = 127/281 (45%), Gaps = 53/281 (18%)
Query: 443 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP---- 498
R+ V+ + L T + + C +G++A +L + ++LG D +AGG+++ S+ P
Sbjct: 72 RECVLGSALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVN 131
Query: 499 -------FYLNRGETKYGGMNLIDGIV--------------YDGLSDVYNKIHMGNCAEN 537
LNR +T + + + GLS MG A
Sbjct: 132 EGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLS-------MGEHAAI 184
Query: 538 TAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK 597
TAK++ ISR+ QDE A +S++ A AY F I P R D + D
Sbjct: 185 TAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTR----DNNLRPD----- 235
Query: 598 INFEKFKSLATVFQK-ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFD 656
+ EK L VF K T+TAGN++ L DGA+ +L +EE + LA ++ D
Sbjct: 236 SSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLV---D 292
Query: 657 AATEPIDFP-------IAPAFAIPTLL-KNGGQLSQFWYDE 689
A T +DF +APA+A+P LL +NG L F + E
Sbjct: 293 AETAAVDFVHGKEGLLMAPAYAVPRLLARNGLTLQDFDFYE 333
>gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 123
Score = 150 bits (380), Expect = 2e-42
Identities = 55/104 (52%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Query: 218 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKK 277
KPLARI +Y +P I PA+AIP LK G+ D+ L+EINEAF+ LA K
Sbjct: 2 KPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAKD 61
Query: 278 LDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK--SGQKG 319
L IDP KVNV+GGA++LGHP+G SGARI++ L H LK G+ G
Sbjct: 62 LGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKRRGGKYG 105
Score = 44.9 bits (107), Expect = 1e-05
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 646 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGG 680
KPLARI +Y +P I PA+AIP LK G
Sbjct: 2 KPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAG 36
>gnl|CDD|220643 pfam10237, N6-adenineMlase, Probable N6-adenine methyltransferase.
This is a protein of approximately 200 residues which is
conserved from plants to humans. It contains a highly
conserved QFW motif close to the N-terminus and a DPPF
motif in the centre. The DPPF motif is characteristic of
N-6 adenine-specific DNA methylases, and this family is
found in eukaryotes.
Length = 161
Score = 145 bits (367), Expect = 4e-40
Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 30/161 (18%)
Query: 681 QLSQFWYDENTTQRLSEEAVCRAGKEGSIALISCPTLYPKIRELAPDAK----------- 729
QLSQFWY + T ++L++ + A + IA +S P++Y ++E K
Sbjct: 1 QLSQFWYSDETAEKLAKALLEGADEGTVIACVSAPSVYAALKERPIPTKNVYLLEYDKRF 60
Query: 730 ----------------DVPRELSAHYDLVVLDPPFLSDECLTKAAVTAKL---PLFVSLT 770
++P +L +D V+ DPPFLS+ECLTK A+T KL P L
Sbjct: 61 AVYGGEFVFYDYNKPLELPEQLKGKFDRVIADPPFLSEECLTKTAITIKLLLKPDSKLLL 120
Query: 771 VSGEIMQDLALRLLGVKKCKFIPRHKNNLANDFACFVNFDS 811
+GE M+DLA +LLG+K F+P H+ NL+N+F C+ NF+S
Sbjct: 121 CTGERMEDLAAKLLGLKITDFLPEHERNLSNEFRCYANFES 161
Score = 59.2 bits (144), Expect = 3e-10
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 320 QLSQFWYDENTTQRLSEEVVCRAGKEGSIALISCPTLYPKIREL 363
QLSQFWY + T ++L++ ++ A + IA +S P++Y ++E
Sbjct: 1 QLSQFWYSDETAEKLAKALLEGADEGTVIACVSAPSVYAALKER 44
>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional.
Length = 417
Score = 149 bits (378), Expect = 7e-39
Identities = 94/316 (29%), Positives = 143/316 (45%), Gaps = 33/316 (10%)
Query: 15 RQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLN 74
R A + AG T+++ C G+ ++ LA+ + G +D+++AGG E MS
Sbjct: 71 RMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAA 130
Query: 75 RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSAD 134
+ L ++ + H G C + A I+R+ D L S +++A
Sbjct: 131 EDMAAGKPPLGMGS-GNLRLRALHPQSHQGVCGDAIATMEGITREALDALGLESQRRAAR 189
Query: 135 AYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK--INFEKFKSLATVFQK-------E 185
A K F +VPV + + EE+ + E +L F +
Sbjct: 190 AIKEGRFDKSLVPVYRDDGS-----VALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDD 244
Query: 186 NGTV------------------TAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYF 227
GT AGN+S + DGAAA +L ++ K KP ARI+A
Sbjct: 245 KGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMA 304
Query: 228 DAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKVNV 287
+ +P AP A +L G+ K D+ LWEINEAF+VV I+ LD+D KVNV
Sbjct: 305 NMGDDPTLMLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNV 364
Query: 288 HGGAVSLGHPIGMSGA 303
+GGA++LGHPIG +G+
Sbjct: 365 NGGAIALGHPIGATGS 380
Score = 94.5 bits (235), Expect = 2e-20
Identities = 79/337 (23%), Positives = 133/337 (39%), Gaps = 45/337 (13%)
Query: 379 DVFIVSGSRTPMG---SFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQA 435
+ +I+ RTP G + +L L L A +++ ++ ++ +DV ++ Q
Sbjct: 3 EAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQR 62
Query: 436 G-----LGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGG 490
G LG R A + AG T+++ C G+ ++ LA+ + G +D+++AGG
Sbjct: 63 GKQGGDLG----RMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGG 118
Query: 491 MESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQD 550
E MS + L ++ + H G C + A I+R+ D
Sbjct: 119 TEMMSYTAAMAAEDMAAGKPPLGMGS-GNLRLRALHPQSHQGVCGDAIATMEGITREALD 177
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKK--INFEKFKSLAT 608
L S +++A A K F +VPV + + EE+ + E +L
Sbjct: 178 ALGLESQRRAARAIKEGRFDKSLVPVYRDDGS-----VALDHEEFPRPQTTAEGLAALKP 232
Query: 609 VFQK-------ENGTV------------------TAGNASTLNDGAAACVLMTEEAVRKF 643
F + GT AGN+S + DGAAA +L ++ K
Sbjct: 233 AFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKH 292
Query: 644 NAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGG 680
KP ARI+A + +P AP A +L G
Sbjct: 293 GLKPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKAG 329
>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI. This
subunit of the FadJI complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit, and YfcY. This protein is almost always
located adjacent to FadJ (TIGR02440). The FadJI complex
is needed for anaerobic beta-oxidation of short-chain
fatty acids in E. coli [Fatty acid and phospholipid
metabolism, Degradation].
Length = 430
Score = 147 bits (372), Expect = 4e-38
Identities = 94/351 (26%), Positives = 166/351 (47%), Gaps = 43/351 (12%)
Query: 2 GNVCQAGLGQAP--CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
G V Q + +AP R+ V+ G+ T +V + CA+ ++ + ++++ G D+ +
Sbjct: 59 GQVVQ--MPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGI 116
Query: 60 AGGMESMSNVPF-----------YLNRGETKYGGMNLIDGI-------VYDGLSDVYNKI 101
AGG +S S +P LN+ T + + + V +++ +
Sbjct: 117 AGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGL 176
Query: 102 HMGNCAENTAKKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIV 161
MG AE AK + I+R EQD A S+ ++ A+++ + +++ P K I
Sbjct: 177 SMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYK---QWIA 233
Query: 162 NEDEEYKKINFEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLA 221
++ + L F +++G+VTA N++ L DGAAA +LM E ++ +PL
Sbjct: 234 EDNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLG 293
Query: 222 RIIAY-FDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKL-- 278
I +Y F A D + P++A P L+ G+A D+ L +++EAF+ LAN++
Sbjct: 294 YIRSYAFTAIDVWQDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFAS 353
Query: 279 ---------------DIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
+ID SK NV GG+++ GHP +GAR++ LK
Sbjct: 354 DKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELK 404
Score = 118 bits (298), Expect = 2e-28
Identities = 79/322 (24%), Positives = 151/322 (46%), Gaps = 26/322 (8%)
Query: 380 VFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQ 439
+ IV+G RTP ++ + A LG + + + ++ +D ++++ G V Q + +
Sbjct: 9 IAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQ--MPE 66
Query: 440 AP--CRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 497
AP R+ V+ G+ T +V + CA+ ++ + ++++ G D+ +AGG +S S +
Sbjct: 67 APNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVL 126
Query: 498 PF-----------YLNRGETKYGGMNLIDGI-------VYDGLSDVYNKIHMGNCAENTA 539
P LN+ T + + + V +++ + MG AE A
Sbjct: 127 PIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMA 186
Query: 540 KKFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKIN 599
K + I+R EQD A S+ ++ A+++ + +++ P K I ++
Sbjct: 187 KTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYK---QWIAEDNNIRHNST 243
Query: 600 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAY-FDAA 658
+ L F +++G+VTA N++ L DGAAA +LM E ++ +PL I +Y F A
Sbjct: 244 LAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAI 303
Query: 659 TEPIDFPIAPAFAIPTLLKNGG 680
D + P++A P L+ G
Sbjct: 304 DVWQDMLMGPSYATPLALQRAG 325
>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing
enzymes; In general, thiolases catalyze the reversible
thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and
acetyl-CoA, a 2-step reaction involving a covalent
intermediate formed with a catalytic cysteine. There are
2 functional different classes: thiolase-I
(3-ketoacyl-CoA thiolase) and thiolase-II
(acetoacetyl-CoA thiolase). Thiolase-I can cleave longer
fatty acid molecules and plays an important role in the
beta-oxidative degradation of fatty acids. Thiolase-II
has a high substrate specificity. Although it can cleave
acetoacyl-CoA, its main function is the synthesis of
acetoacyl-CoA from two molecules of acetyl-CoA, which
gives it importance in several biosynthetic pathways.
Length = 393
Score = 132 bits (332), Expect = 3e-33
Identities = 91/350 (26%), Positives = 141/350 (40%), Gaps = 72/350 (20%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+G V AG GQ +QA + AG + +N +C SG++A+ LA Q ++ G + ++A
Sbjct: 50 LGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILA 109
Query: 61 GGMESMS----NVP--FYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKF 114
GG E M N +++ KYG
Sbjct: 110 GGFEKMETSAENNAKEKHIDVLINKYG--------------------------------- 136
Query: 115 NISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFE 173
R D +AL+ + A K+ F + + RKG +E ++ + + +
Sbjct: 137 --MRACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLD 194
Query: 174 KFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAK-------PLARIIAY 226
+ L F KE +TAGNA LNDGAAA +LM+E +K + L I
Sbjct: 195 EIAKLRPAFDKE-DFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDM 253
Query: 227 FDAATEPIDFPIA----PAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDP 282
+ + P A L+ G+ D+ L E ++AF+ A + L + P
Sbjct: 254 ASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCP 313
Query: 283 ------------------SKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
S +N +GGA+++GHPIG SGA I LC LK
Sbjct: 314 EGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELK 363
Score = 112 bits (280), Expect = 2e-26
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 46/280 (16%)
Query: 383 VSGSRTPMGSF---RSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQ 439
+ T G F + + A + GA AI +A++ A + V+E +G V AG GQ
Sbjct: 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQ 60
Query: 440 APCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS---- 495
+QA + AG + +N +C SG++A+ LA Q ++ G + ++AGG E M
Sbjct: 61 NCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAE 120
Query: 496 NVP--FYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYA 553
N +++ KYG R D +A
Sbjct: 121 NNAKEKHIDVLINKYG-----------------------------------MRACPDAFA 145
Query: 554 LSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYK-KINFEKFKSLATVFQK 612
L+ + A K+ F + + RKG +E ++ + + ++ L F K
Sbjct: 146 LAGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDK 205
Query: 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARII 652
E +TAGNA LNDGAAA +LM+E +K + AR I
Sbjct: 206 E-DFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREI 244
>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that
catalyze a (decarboxylating or non-decarboxylating)
Claisen-like condensation reaction. Members are share
strong structural similarity, and are involved in the
synthesis and degradation of fatty acids, and the
production of polyketides, a diverse group of natural
products.
Length = 254
Score = 66.7 bits (163), Expect = 4e-12
Identities = 33/140 (23%), Positives = 51/140 (36%), Gaps = 7/140 (5%)
Query: 191 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI----APAFAIPT 246
DGAAA V+ +EE + A P A I++ P A A
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 247 LLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPSKV---NVHGGAVSLGHPIGMSGA 303
L+ G+ D+ E + + + A L +DP V V + GHP+G +G
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGL 213
Query: 304 RIVIHLCHALKSGQKGQLSQ 323
I+ L L+ +
Sbjct: 214 AILDELLLMLEHEFIPPTPR 233
Score = 59.8 bits (145), Expect = 1e-09
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 402 ATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVN 461
A++LG A E AI A + K + V +G +G Q G+ +VN
Sbjct: 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGP-AYSVN 65
Query: 462 KVCASGMKAIMLASQTLSLGHQDVMVAGGMES 493
+ CA+G+ A+ LA Q + G D+++AGG E
Sbjct: 66 QACATGLTALALAVQQVQNGKADIVLAGGSEE 97
Score = 44.0 bits (104), Expect = 1e-04
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 2 GNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAG 61
G +G Q G+ +VN+ CA+G+ A+ LA Q + G D+++AG
Sbjct: 35 GTTGGSGEFSGAAGQLAYHLGISGGP-AYSVNQACATGLTALALAVQQVQNGKADIVLAG 93
Query: 62 GMES 65
G E
Sbjct: 94 GSEE 97
Score = 34.7 bits (80), Expect = 0.14
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 619 AGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAY---FDAATE 660
DGAAA V+ +EE + A P A I++ FD A+
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASM 138
>gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 55.7 bits (135), Expect = 5e-08
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 379 DVFIVSGSRTPMG-----SFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVC 433
DV I+ +T G S R V A A++ A +D D+ +Y+GN+
Sbjct: 3 DVAIIGVGQTKFGELWDVSLRDLAVE---------AGLEALEDAGIDGKDIDAMYVGNMS 53
Query: 434 QAGLGQAPCRQAVI--FAGL-PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGG 490
A+I +AGL P T V CASG A+ A ++ G DV++A G
Sbjct: 54 AGLFVSQEHIAALIADYAGLAPIP--ATRVEAACASGGAALRQAYLAVASGEADVVLAAG 111
Query: 491 MESMSNVP 498
+E M++VP
Sbjct: 112 VEKMTDVP 119
Score = 36.8 bits (86), Expect = 0.046
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 20 FAGL-PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 70
+AGL P T V CASG A+ A ++ G DV++A G+E M++VP
Sbjct: 70 YAGLAPIP--ATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVP 119
Score = 36.0 bits (84), Expect = 0.074
Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 40/153 (26%)
Query: 194 ASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDFPI-----------APAF 242
S + DGAAA +L +EE +++ P+ + A+ + D A
Sbjct: 208 CSPITDGAAAVILASEEKAKEYTDTPV-----WIKASGQASDTIALHDRKDFTTLDAAVV 262
Query: 243 AIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKL---------------------DID 281
A K G+ +D+ + E+++ F++ + + L DI
Sbjct: 263 AAEKAYKMAGIEPKDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDI- 321
Query: 282 PSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
VN GG + GHP+G +G + + L+
Sbjct: 322 --PVNPSGGLKAKGHPVGATGVSQAVEIVWQLR 352
>gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol
carrier protein (SCP)-x isoform and related proteins;
SCP-2 has multiple roles in intracellular lipid
circulation and metabolism. The N-terminal presequence
in the SCP-x isoform represents a peroxisomal
3-ketacyl-Coa thiolase specific for branched-chain acyl
CoAs, which is proteolytically cleaved from the sterol
carrier protein.
Length = 375
Score = 55.3 bits (134), Expect = 6e-08
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 198 NDGAAACVLMTEEAVRKFNAKPLARIIAYFDAA-----TEPIDFPIAPAF--AIPTLLKN 250
+DGAAA VL +EE R+ +P I+ A+ +E DF A A K
Sbjct: 205 SDGAAAVVLASEERARELTDRP-VWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKM 263
Query: 251 GGVAKQDVALWEINEAFSVVVLANIKKL---------------DIDPS---KVNVHGGAV 292
G+ D+ + E+ + F++ L ++ L D VN GG +
Sbjct: 264 AGITPDDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLL 323
Query: 293 SLGHPIGMSGARIVIHLCHALK 314
S GHP+G +G + L+
Sbjct: 324 SKGHPLGATGLAQAVEAVRQLR 345
Score = 47.6 bits (114), Expect = 2e-05
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 405 LGAVAIESAIQKANMDKSDVQEVYMGNVC----QAGLGQAPCRQAVIFAGLPKSTVCTTV 460
L A A +A+ A ++ +D+ V +GN Q+ G L K
Sbjct: 19 LAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYL---GLLGKPATRVEA 75
Query: 461 NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
ASG A+ A+ ++ G DV++ G E MS+VP
Sbjct: 76 A--GASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVP 111
Score = 31.1 bits (71), Expect = 2.2
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 626 NDGAAACVLMTEEAVRKFNAKPLARIIA 653
+DGAAA VL +EE R+ +P I+
Sbjct: 205 SDGAAAVVLASEERARELTDRP-VWILG 231
Score = 30.3 bits (69), Expect = 4.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 30 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 70
T V ASG A+ A+ ++ G DV++ G E MS+VP
Sbjct: 71 TRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVP 111
>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP)
synthase (KAS), type I and II. KASs are responsible for
the elongation steps in fatty acid biosynthesis. KASIII
catalyses the initial condensation and KAS I and II
catalyze further elongation steps by Claisen
condensation of malonyl-acyl carrier protein (ACP) with
acyl-ACP.
Length = 406
Score = 45.2 bits (108), Expect = 9e-05
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 12 APCRQAVIFAGL--PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68
Q I GL P TV T CASG AI A++ + LG DV++AGG E++
Sbjct: 139 MAAGQVAIRLGLRGPNYTVSTA----CASGAHAIGDAARLIRLGRADVVIAGGAEALIT 193
Score = 45.2 bits (108), Expect = 9e-05
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 440 APCRQAVIFAGL--PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
Q I GL P TV T CASG AI A++ + LG DV++AGG E++
Sbjct: 139 MAAGQVAIRLGLRGPNYTVSTA----CASGAHAIGDAARLIRLGRADVVIAGGAEALIT 193
Score = 30.6 bits (70), Expect = 3.6
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 197 LNDGAAACVLMTEEAVRKFNAKPLARIIAY---FDAA--TEPIDFPIAPAFAIPTLLKNG 251
L +GA VL + E + AK A I+ Y DA T P A A+ L +
Sbjct: 229 LGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADA 288
Query: 252 GVAKQDV 258
G++ +D+
Sbjct: 289 GLSPEDI 295
Score = 30.2 bits (69), Expect = 4.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 625 LNDGAAACVLMTEEAVRKFNAKPLARIIAY 654
L +GA VL + E + AK A I+ Y
Sbjct: 229 LGEGAGVLVLESLEHAKARGAKIYAEILGY 258
>gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional.
Length = 391
Score = 43.3 bits (103), Expect = 3e-04
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 405 LGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFA----GLPKSTVCTTV 460
+ A A +A+ A +D VQ+ Y+G V G + Q ++ G+P V
Sbjct: 25 MAAEAGRAALADAGIDYDAVQQAYVGYV----YGDSTSGQRALYEVGMTGIP----IVNV 76
Query: 461 NKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494
N C++G A+ LA Q + G D +A G E M
Sbjct: 77 NNNCSTGSTALFLARQAVRSGAADCALALGFEQM 110
Score = 31.8 bits (73), Expect = 1.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 32 VNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 66
VN C++G A+ LA Q + G D +A G E M
Sbjct: 76 VNNNCSTGSTALFLARQAVRSGAADCALALGFEQM 110
>gnl|CDD|180433 PRK06157, PRK06157, acetyl-CoA acetyltransferase; Validated.
Length = 398
Score = 41.2 bits (97), Expect = 0.002
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Query: 409 AIESAIQKANMDKSDVQEVYMG---NVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCA 465
A A+ A ++ D+ + G + +G P +A+ +P T V CA
Sbjct: 34 AFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIP----VTRVENFCA 89
Query: 466 SGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMN 512
+G +A A ++ G D+ +A G+E + +T YGG+
Sbjct: 90 TGSEAFRGAVYAVASGAYDIALALGVEKLK---------DTGYGGLP 127
Score = 38.5 bits (90), Expect = 0.014
Identities = 65/315 (20%), Positives = 114/315 (36%), Gaps = 78/315 (24%)
Query: 29 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLID- 87
T V CA+G +A A ++ G D+ +A G+E + +T YGG+ + +
Sbjct: 81 VTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLK---------DTGYGGLPVANP 131
Query: 88 GIVYDG-LSDVYNKIHMGNCAENTAKKFNISRDE-QDEYALSSYKKSADAYKNNVFSSQI 145
G + D + +V + A A K+ +SR++ + A S K A+ +N
Sbjct: 132 GTLADMTMPNVTAPGNFAQLASAYAAKYGVSREDLKRAMAHVSVKSHANGARN------- 184
Query: 146 VPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQKENGTVTAGN-----ASTLNDG 200
P KA + T Q + AG ++DG
Sbjct: 185 -----P----KA----------------HLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDG 219
Query: 201 AAACVLMTEEAVRKFNAKPLARIIAYFDAAT--EPIDFPIAPAFAIPTLLKNGGVA---- 254
AAA ++ T E R K + A A + + + PT A
Sbjct: 220 AAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREA 279
Query: 255 -----KQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVNVHGGA 291
++++++ E+++ FS+ L ++ L + + GG
Sbjct: 280 GITDPREELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGL 339
Query: 292 VSLGHPIGMSGARIV 306
GHPIG SG R++
Sbjct: 340 KCFGHPIGASGLRML 354
>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 411
Score = 40.9 bits (97), Expect = 0.002
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 28 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 65
++ CA+G AI A++ ++ G DVMVAGG E+
Sbjct: 154 PNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEA 191
Score = 40.9 bits (97), Expect = 0.002
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 493
++ CA+G AI A++ ++ G DVMVAGG E+
Sbjct: 154 PNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEA 191
>gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal
domain. The structure of beta-ketoacyl synthase is
similar to that of the thiolase family (pfam00108) and
also chalcone synthase. The active site of beta-ketoacyl
synthase is located between the N and C-terminal
domains. The N-terminal domain contains most of the
structures involved in dimer formation and also the
active site cysteine.
Length = 243
Score = 40.3 bits (95), Expect = 0.002
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 36 CASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68
C+S + A+ A +++ G D+ +AGG+E+
Sbjct: 164 CSSSLVALHAAVRSIRRGECDLALAGGVEAPLT 196
Score = 40.3 bits (95), Expect = 0.002
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 464 CASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
C+S + A+ A +++ G D+ +AGG+E+
Sbjct: 164 CSSSLVALHAAVRSIRRGECDLALAGGVEAPLT 196
>gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional.
Length = 438
Score = 40.3 bits (94), Expect = 0.003
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 29/154 (18%)
Query: 195 STLNDGAAACVLMTEEAVRKFNAKP----LARIIAYFDAATEPIDFP------IAPAFAI 244
S ++DG A VL +EE ++K P L I + A+ + P A
Sbjct: 256 SQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRAAA 315
Query: 245 PTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDI-DPSK-----------------VN 286
L GV D+ + E+++ F++ L + L I + VN
Sbjct: 316 QKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVN 375
Query: 287 VHGGAVSLGHPIGMSGARIVIHLCHALKSGQKGQ 320
GG +S GHP+G +G + ++ + +K GQ G+
Sbjct: 376 TGGGLLSFGHPVGATGVKQIMEVYRQMK-GQCGE 408
>gnl|CDD|180373 PRK06059, PRK06059, lipid-transfer protein; Provisional.
Length = 399
Score = 40.1 bits (94), Expect = 0.003
Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 23/129 (17%)
Query: 375 SKPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEV------- 427
S P V+I+ P G + V + G VA +A+ A +D DVQ V
Sbjct: 1 SMPEPVYILGAGMHPWGKWGRDFV-----EYGVVAARAALADAGLDWRDVQLVVGADTIR 55
Query: 428 --YMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDV 485
Y G V A QA + + G P ++ CASG +A+ A + G DV
Sbjct: 56 NGYPGFVAGATFAQA-----LGWNGAP----VSSSYAACASGSQALQSARAQILAGLCDV 106
Query: 486 MVAGGMESM 494
+ G ++
Sbjct: 107 ALVVGADTT 115
>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a
subclass of decarboxylating condensing enzymes,
including beta-ketoacyl [ACP] synthase, type I and II
and polyketide synthases.They are characterized by the
utlization of acyl carrier protein (ACP) thioesters as
primer substrates, as well as the nature of their active
site residues.
Length = 407
Score = 39.7 bits (93), Expect = 0.005
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 29 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67
T CA+ ++A+ LA + + G D++V GG+E
Sbjct: 155 IKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL 193
Score = 39.7 bits (93), Expect = 0.005
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495
T CA+ ++A+ LA + + G D++V GG+E
Sbjct: 155 IKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL 193
>gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional.
Length = 403
Score = 39.3 bits (92), Expect = 0.007
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
Query: 405 LGAVAIESAIQKANMDKSDVQEVYMGNVC------QAGLGQAPCRQAVIFAGLPKSTVCT 458
L ++ + A +D D++ V++GN Q LG P G+P S
Sbjct: 29 LTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALWGVPASRH-- 86
Query: 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 498
CASG A + A L G DV + G+E M VP
Sbjct: 87 --EAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVP 124
Score = 39.3 bits (92), Expect = 0.007
Identities = 34/157 (21%), Positives = 63/157 (40%), Gaps = 34/157 (21%)
Query: 195 STLNDGAAACVLMTEEAVRKF-NAKPLARI---------IAYFD----AATEPIDFPIAP 240
S + DG A VL ++ +R + +A+P+ RI + +A +P P
Sbjct: 220 SQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVR 279
Query: 241 AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKL---------------DIDPS-- 283
A+ + GV D+ +E+++ F+ I + +I
Sbjct: 280 Q-AVLDAYRRAGVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGR 338
Query: 284 -KVNVHGGAVSLGHPIGMSGARIVIHLCHALKSGQKG 319
+N GG + GHP+G SG R+++ + +G G
Sbjct: 339 LPINPSGGLIGGGHPVGASGVRMLLDAAKQV-TGTAG 374
Score = 29.7 bits (67), Expect = 6.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 36 CASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVP 70
CASG A + A L G DV + G+E M VP
Sbjct: 90 CASGSVATLAAMADLRAGRYDVALVVGVELMKTVP 124
>gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 405
Score = 38.8 bits (91), Expect = 0.009
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 19 IFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67
+F GL K V T + C SG + I A + + G+Q VM+AGG E +
Sbjct: 149 LFFGL-KGRVIPT-SSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELC 195
Score = 38.8 bits (91), Expect = 0.009
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 447 IFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495
+F GL K V T + C SG + I A + + G+Q VM+AGG E +
Sbjct: 149 LFFGL-KGRVIPT-SSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELC 195
>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid
metabolism / Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 412
Score = 38.8 bits (91), Expect = 0.010
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Query: 22 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 65
G + V CA+G AI A + + LG DV++AGG E+
Sbjct: 153 GPNYTPVTA-----CATGAHAIGDAVRLIRLGKADVVIAGGAEA 191
Score = 38.8 bits (91), Expect = 0.010
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Query: 450 GLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 493
G + V CA+G AI A + + LG DV++AGG E+
Sbjct: 153 GPNYTPVTA-----CATGAHAIGDAVRLIRLGKADVVIAGGAEA 191
Score = 30.7 bits (70), Expect = 3.1
Identities = 34/129 (26%), Positives = 46/129 (35%), Gaps = 14/129 (10%)
Query: 200 GAAACVLMTEEAVRKFNAKPLARIIAYF---DAA--TEPIDFPIAPAFAIPTLLKNGGVA 254
GA A VL E AK A I+ Y DA T P A+ L + G+
Sbjct: 233 GAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLT 292
Query: 255 KQDVALWEIN------EAFSVVVLANIKKL-DIDPSKVNVHGGAVSLGHPIGMSGARIVI 307
+D+ IN A IK++ + V GH +G +GA I
Sbjct: 293 PEDIDY--INAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAI 350
Query: 308 HLCHALKSG 316
AL+ G
Sbjct: 351 ISLLALRDG 359
>gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional.
Length = 385
Score = 38.3 bits (89), Expect = 0.013
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 409 AIESAIQKANMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGM 468
+I+ A+ A + ++D++ V +G+ G+ P ++GL V V +CA+G+
Sbjct: 28 SIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGL-TGKVPLRVEAMCATGL 86
Query: 469 KAIMLASQTLSLGHQDVMVAGGMESMSNV 497
A + A ++ G D+ +A G++ M+ V
Sbjct: 87 AASLTAYTAVASGLVDMAIAVGVDKMTEV 115
Score = 33.7 bits (77), Expect = 0.38
Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 40/163 (24%)
Query: 193 NASTLNDGAAACVLMTEEAVRK-----------------------------FNAKPLARI 223
++ ++DG+A + +EE V++ F A LA
Sbjct: 205 DSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAAR 264
Query: 224 IAYFDAATEPIDFPIAP---AFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDI 280
AY A P D +A AF I ++ +D+ E + + +K
Sbjct: 265 QAYNMAKVTPNDIEVATVHDAFTIAEIM-----GYEDLGFTEKGKGGKFIEEGQSEKGGK 319
Query: 281 DPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSGQKGQLSQ 323
VN+ GG + GHP+G +G ++ + L+ + G+L Q
Sbjct: 320 VG--VNLFGGLKAKGHPLGATGLSMIYEITKQLR-DEAGKLQQ 359
>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II.
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II,
FabF) is involved in the condensation step of fatty acid
biosynthesis in which the malonyl donor group is
decarboxylated and the resulting carbanion used to
attack and extend the acyl group attached to the acyl
carrier protein. Most genomes encoding fatty acid
biosynthesis contain a number of condensing enzymes,
often of all three types: 1, 2 and 3. Synthase 2 is
mechanistically related to synthase 1 (KAS-I, FabB)
containing a number of absolutely conserved catalytic
residues in common. This model is based primarily on
genes which are found in apparent operons with other
essential genes of fatty acid biosynthesis
(GenProp0681). The large gap between the trusted cutoff
and the noise cutoff contains many genes which are not
found adjacent to genes of the fatty acid pathway in
genomes that often also contain a better hit to this
model. These genes may be involved in other processes
such as polyketide biosyntheses. Some genomes contain
more than one above-trusted hit to this model which may
result from recent paralogous expansions. Second hits to
this model which are not next to other fatty acid
biosynthesis genes may be involved in other processes.
FabB sequences should fall well below the noise cutoff
of this model [Fatty acid and phospholipid metabolism,
Biosynthesis].
Length = 407
Score = 37.9 bits (89), Expect = 0.018
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 24 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 65
P V T CA+G AI A + + G DVM+AGG E+
Sbjct: 153 PNHAVVTA----CATGTHAIGDAFRLIQRGDADVMIAGGAEA 190
Score = 37.9 bits (89), Expect = 0.018
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 452 PKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 493
P V T CA+G AI A + + G DVM+AGG E+
Sbjct: 153 PNHAVVTA----CATGTHAIGDAFRLIQRGDADVMIAGGAEA 190
>gnl|CDD|164577 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein synthase 3;
Provisional.
Length = 326
Score = 37.2 bits (86), Expect = 0.026
Identities = 46/213 (21%), Positives = 79/213 (37%), Gaps = 27/213 (12%)
Query: 386 SRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGL-GQAPCRQ 444
+RT + + S S TKL A A A+ KA+MD ++ + + L G A Q
Sbjct: 35 TRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQ 94
Query: 445 AVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRG 504
A I A V + C+ + A++ A+Q + G ++ G +++S + +R
Sbjct: 95 AEIGA---TRAVAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKWIDWSDRK 151
Query: 505 ETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYALSSYKKSADAY 564
D +G EN+ F + D + L K +
Sbjct: 152 TCIL-------------FGDGAGAAIIGASYENSILGFKLCTDGKLNSHLQLMNKPVNNQ 198
Query: 565 KNNVFSSQIVPVSIPQRKGKAD-IIVNEDEEYK 596
F + +P +G+ I +N E YK
Sbjct: 199 S---FGTTKLP------QGQYQSISMNGKEVYK 222
>gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 36.1 bits (84), Expect = 0.071
Identities = 38/136 (27%), Positives = 54/136 (39%), Gaps = 34/136 (25%)
Query: 195 STLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPIDF-------PIA---PAFAI 244
S ++DGAAA VL E A+ L R + F A DF P+A P A
Sbjct: 213 SLVSDGAAALVLADAE-----TARALQRAVR-FRARAHVNDFLPLSRRDPLAFEGPRRAW 266
Query: 245 PTLLKNGGVAKQDVALWEINEAFSVVVLANIKKLDIDPS------------------KVN 286
L GV D++ E ++ F++ L + + + P VN
Sbjct: 267 QRALAQAGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVN 326
Query: 287 VHGGAVSLGHPIGMSG 302
GG + GHPIG +G
Sbjct: 327 PSGGLKAKGHPIGATG 342
>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 381
Score = 35.4 bits (82), Expect = 0.12
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 21/132 (15%)
Query: 197 LNDGAAACVLMTEEAVRKFNAKPLARII-------AYFDAATEPIDFPIAPAFAIPTLLK 249
L +G A VL + E +K AK +I+ AY +A EP D A A AI L
Sbjct: 208 LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEP-DGKSAIA-AIQQCLA 265
Query: 250 NGGVAKQDVAL-------WEINEAFSVVVLANIKKLDIDPSKVNVHGGAVSLGHPIGMSG 302
G+ +D+ +N+ ++ + P +V V + GH +G SG
Sbjct: 266 RSGLTPEDIDYIHAHGTATRLNDQREANLIQALF-----PHRVAVSSTKGATGHTLGASG 320
Query: 303 ARIVIHLCHALK 314
A V AL+
Sbjct: 321 ALGVAFSLLALR 332
>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase.
Length = 437
Score = 34.4 bits (79), Expect = 0.24
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 36 CASGMKAIMLASQTLSLGHQDVMVAGGMES 65
CA+G +I A + + G DVMVAGG ES
Sbjct: 184 CATGAHSIGDAFRMIQFGDADVMVAGGTES 213
Score = 34.4 bits (79), Expect = 0.24
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 464 CASGMKAIMLASQTLSLGHQDVMVAGGMES 493
CA+G +I A + + G DVMVAGG ES
Sbjct: 184 CATGAHSIGDAFRMIQFGDADVMVAGGTES 213
>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 418
Score = 33.2 bits (76), Expect = 0.58
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 25 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 65
K+ V T V+ CASG +AI A + + LG D+ + GG+E+
Sbjct: 161 KAGVITPVS-ACASGSEAIAQAWRQIVLGEADIAICGGVET 200
Score = 33.2 bits (76), Expect = 0.58
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 453 KSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMES 493
K+ V T V+ CASG +AI A + + LG D+ + GG+E+
Sbjct: 161 KAGVITPVS-ACASGSEAIAQAWRQIVLGEADIAICGGVET 200
>gnl|CDD|220359 pfam09719, C_GCAxxG_C_C, Putative redox-active protein
(C_GCAxxG_C_C). This entry represents a putative
redox-active protein of about 140 residues, with four
perfectly conserved Cys residues. It includes a CGAXXG
motif. Most members are found within one or two loci of
transporter or oxidoreductase genes. A member from
Geobacter sulfurreducens, located in a molybdenum
transporter operon, has a TAT (twin-arginine
translocation) signal sequence for Sec-independent
transport across the plasma membrane, a hallmark of
bound prosthetic groups such as FeS clusters.
Length = 119
Score = 30.3 bits (69), Expect = 1.4
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Query: 162 NEDEEYKKINFEKFKSLATVFQKENGTVT----AGNASTLNDGAAACVLMTEEAVRK 214
DEE K+ + + L F+++ G++ G + + C + EA
Sbjct: 58 TPDEEAKEKLYALVRELHDWFKEKYGSICCRELLGKRTESGERKRRCGEIVGEAAEI 114
Score = 30.3 bits (69), Expect = 1.4
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Query: 590 NEDEEYKKINFEKFKSLATVFQKENGTVT----AGNASTLNDGAAACVLMTEEAVRK 642
DEE K+ + + L F+++ G++ G + + C + EA
Sbjct: 58 TPDEEAKEKLYALVRELHDWFKEKYGSICCRELLGKRTESGERKRRCGEIVGEAAEI 114
>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General
function prediction only].
Length = 229
Score = 31.4 bits (71), Expect = 1.7
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 718 YPKIRELAPDAKDVPRELSAHYDLVVL--DPPFLSDECLTKAAVTAKLPLFVSLTVSGEI 775
K+ P+A + +EL Y L +L + L + + L F ++ +S ++
Sbjct: 94 LAKLLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGL---LDYFDAVFISEDV 150
Query: 776 --------MQDLALRLLGVKK--CKFIPRHKNNLANDFA 804
+ + AL LGV F+ ++L ND
Sbjct: 151 GVAKPDPEIFEYALEKLGVPPEEALFVG---DSLENDIL 186
>gnl|CDD|198206 cd10343, SH2_SHIP, Src homology 2 (SH2) domain found in
SH2-containing inositol-5'-phosphatase (SHIP) and
SLAM-associated protein (SAP). The SH2-containing
inositol-5'-phosphatase, SHIP (also called
SHIP1/SHIP1a), is a hematopoietic-restricted
phosphatidylinositide phosphatase that translocates to
the plasma membrane after extracellular stimulation and
hydrolyzes the phosphatidylinositol-3-kinase
(PI3K)-generated second messenger PI-3,4,5-P3 (PIP3) to
PI-3,4-P2. As a result, SHIP dampens down PIP3 mediated
signaling and represses the proliferation,
differentiation, survival, activation, and migration of
hematopoietic cells. PIP3 recruits lipid-binding
pleckstrin homology(PH) domain-containing proteins to
the inner wall of the plasma membrane and activates
them. PH domain-containing downstream effectors include
the survival/proliferation enhancing serine/threonine
kinase, Akt (protein kinase B), the tyrosine kinase,
Btk, the regulator of protein translation, S6K, and the
Rac and cdc42 guanine nucleotide exchange factor, Vav.
SHIP is believed to act as a tumor suppressor during
leukemogenesis and lymphomagenesis, and may play a role
in activating the immune system to combat cancer. SHIP
contains an N-terminal SH2 domain, a centrally located
phosphatase domain that specifically hydrolyzes the
5'-phosphate from PIP3, PI-4,5-P2 and inositol-1,3,4,5-
tetrakisphosphate (IP4), a C2 domain, that is an
allosteric activating site when bound by SHIP's
enzymatic product, PI-3,4-P2; 2 NPXY motifs that bind
proteins with a phosphotyrosine binding (Shc, Dok 1, Dok
2) or an SH2 (p85a, SHIP2) domain; and a proline-rich
domain consisting of four PxxP motifs that bind a subset
of SH3-containing proteins including Grb2, Src, Lyn,
Hck, Abl, PLCg1, and PIAS1. The SH2 domain of SHIP binds
to the tyrosine phosphorylated forms of Shc, SHP-2,
Doks, Gabs, CD150, platelet-endothelial cell adhesion
molecule, Cas, c-Cbl, immunoreceptor tyrosine-based
inhibitory motifs (ITIMs), and immunoreceptor
tyrosine-based activation motifs (ITAMs). The X-linked
lymphoproliferative syndrome (XLP) gene encodes SAP
(also called SH2D1A/DSHP) a protein that consists of a 5
residue N-terminus, a single SH2 domain, and a short 25
residue C-terminal tail. XLP is characterized by an
extreme sensitivity to Epstein-Barr virus. Both T and
natural killer (NK) cell dysfunctions have been seen in
XLP patients. SAP binds the cytoplasmic tail of
Signaling lymphocytic activation molecule (SLAM), 2B4,
Ly-9, and CD84. SAP is believed to function as a
signaling inhibitor, by blocking or regulating binding
of other signaling proteins. SAP and the SAP-like
protein EAT-2 recognize the sequence motif TIpYXX(V/I),
which is found in the cytoplasmic domains of a
restricted number of T, B, and NK cell surface receptors
and are proposed to be natural inhibitors or regulators
of the physiological role of a small family of receptors
on the surface of these cells. In general SH2 domains
are involved in signal transduction. They typically bind
pTyr-containing ligands via two surface pockets, a pTyr
and hydrophobic binding pocket, allowing proteins with
SH2 domains to localize to tyrosine phosphorylated
sites.
Length = 103
Score = 29.3 bits (66), Expect = 2.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 322 SQFWYDENTTQRLSEEVVCRAGKEGS 347
+ WY N T+ +EE++ +AGK+GS
Sbjct: 2 APPWYHGNITRSKAEELLSKAGKDGS 27
Score = 28.6 bits (64), Expect = 4.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 683 SQFWYDENTTQRLSEEAVCRAGKEGS 708
+ WY N T+ +EE + +AGK+GS
Sbjct: 2 APPWYHGNITRSKAEELLSKAGKDGS 27
>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes;
Family of enzymes that catalyze the formation of a new
carbon-carbon bond by a decarboxylating Claisen-like
condensation reaction. Members are involved in the
synthesis of fatty acids and polyketides, a diverse
group of natural products. Both pathways are an
iterative series of additions of small carbon units,
usually acetate, to a nascent acyl group. There are 2
classes of decarboxylating condensing enzymes, which can
be distinguished by sequence similarity, type of active
site residues and type of primer units (acetyl CoA or
acyl carrier protein (ACP) linked units).
Length = 332
Score = 31.1 bits (70), Expect = 2.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 28 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 66
V+ CA + A+ LA+ + G QD+++AGG E +
Sbjct: 88 PAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEEL 126
Score = 31.1 bits (70), Expect = 2.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 456 VCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494
V+ CA + A+ LA+ + G QD+++AGG E +
Sbjct: 88 PAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEEL 126
>gnl|CDD|234423 TIGR03972, rSAM_TYW1, wyosine biosynthesis protein TYW1. Members
of this protein family are the archaeal protein TWY1, a
radical SAM protein that catalyzes the second step in
creating the wye-bases, wyosine and derivatives such as
wybutosine, for tRNA base modification [Protein
synthesis, tRNA and rRNA base modification].
Length = 297
Score = 30.7 bits (70), Expect = 2.7
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Query: 348 IALISCPTLYPKIRELAPDAKASRNFASKPGDVFIVS-GSRTPM 390
I+L PTLYP++ EL + R F F+V+ G+R +
Sbjct: 124 ISLSGEPTLYPRLPELI-EEFHKRGFT-----TFLVTNGTRPDV 161
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins
[Secondary metabolites biosynthesis, transport, and
catabolism].
Length = 1061
Score = 31.3 bits (71), Expect = 2.8
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 30 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 89
TV+ C+S + A+ LA Q+L LG D+ +AGG+ + + GGM DG
Sbjct: 168 VTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSA---GGMLSPDGR 224
Query: 90 V--YDGLSDVY 98
+D +D Y
Sbjct: 225 CKAFDADADGY 235
Score = 31.3 bits (71), Expect = 2.8
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 458 TTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGI 517
TV+ C+S + A+ LA Q+L LG D+ +AGG+ + + GGM DG
Sbjct: 168 VTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSA---GGMLSPDGR 224
Query: 518 V--YDGLSDVY 526
+D +D Y
Sbjct: 225 CKAFDADADGY 235
>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty
acids into a large variety of different products, called
polyketides, by successive decarboxylating Claisen
condensations. PKSs can be divided into 2 groups,
modular type I PKSs consisting of one or more large
multifunctional proteins and iterative type II PKSs,
complexes of several monofunctional subunits.
Length = 421
Score = 31.0 bits (71), Expect = 3.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 31 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGG 62
TV+ C+S + A+ LA Q+L G D+ + GG
Sbjct: 165 TVDTACSSSLVALHLACQSLRSGECDLALVGG 196
Score = 31.0 bits (71), Expect = 3.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 459 TVNKVCASGMKAIMLASQTLSLGHQDVMVAGG 490
TV+ C+S + A+ LA Q+L G D+ + GG
Sbjct: 165 TVDTACSSSLVALHLACQSLRSGECDLALVGG 196
>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 424
Score = 30.4 bits (69), Expect = 4.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 36 CASGMKAIMLASQTLSLGHQDVMVAGGMES 65
CA+G++AI A++ + G DV V GG E+
Sbjct: 173 CAAGVQAIGDAARLIRSGEADVAVCGGTEA 202
Score = 30.4 bits (69), Expect = 4.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 464 CASGMKAIMLASQTLSLGHQDVMVAGGMES 493
CA+G++AI A++ + G DV V GG E+
Sbjct: 173 CAAGVQAIGDAARLIRSGEADVAVCGGTEA 202
>gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)]
synthase III C terminal. This domain is found on
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
EC:2.3.1.41, the enzyme responsible for initiating the
chain of reactions of the fatty acid synthase in plants
and bacteria.
Length = 90
Score = 28.2 bits (64), Expect = 5.0
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 11/50 (22%)
Query: 276 KKLDIDPSKV--NVHGGAVSLGHPIGMSGARIVIHLCHALKSG--QKGQL 321
K+L + P KV N+ G+ S A I + L A++ G + G L
Sbjct: 29 KRLGLPPEKVVVNLD----RYGN---TSAASIPLALDEAVEEGKLKPGDL 71
>gnl|CDD|238089 cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta
fold domain found duplicated in the rhodanese protein.
The cysteine containing enzymatically active version of
the domain is also found in the Cdc25 class of protein
phosphatases and a variety of proteins such as sulfide
dehydrogenases and certain stress proteins such as
senesence specific protein 1 in plants, PspE and GlpE
in bacteria and cyanide and arsenate resistance
proteins. Inactive versions (no active site cysteine)
are also seen in dual specificity phosphatases,
ubiquitin hydrolases from yeast and in
sulfuryltransferases, where they are believed to play a
regulatory role in multidomain proteins.
Length = 89
Score = 28.0 bits (63), Expect = 5.9
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 35 VCASGMKAIMLASQTLSLGHQDV-MVAGGME 64
C SG ++ A G +V + GGM
Sbjct: 56 YCRSGNRSARAAKLLRKAGGTNVYNLEGGML 86
Score = 28.0 bits (63), Expect = 5.9
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 463 VCASGMKAIMLASQTLSLGHQDV-MVAGGME 492
C SG ++ A G +V + GGM
Sbjct: 56 YCRSGNRSARAAKLLRKAGGTNVYNLEGGML 86
>gnl|CDD|107259 cd01574, PBP1_LacI, Ligand-binding domain of DNA transcription
repressor LacI specific for lactose, a member of the
LacI-GalR family of bacterial transcription regulators.
Ligand-binding domain of DNA transcription repressor
LacI specific for lactose, a member of the LacI-GalR
family of bacterial transcription regulators. The
ligand-binding domain of LacI is structurally homologous
to the periplasmic sugar-binding domain of ABC-type
transporters and both domains contain the type I
periplasmic binding protein-like fold. The LacI-GalR
family repressors are composed of two functional
domains: an N-terminal HTH (helix-turn-helix) domain,
which is responsible for the DNA-binding specificity,
and a C-terminal ligand-binding domain, which is
homologous to the type I periplasmic binding proteins.
As also observed in the periplasmic binding proteins,
the C-terminal domain of the bacterial transcription
repressor undergoes a conformational change upon ligand
binding which in turn changes the DNA binding affinity
of the repressor.
Length = 264
Score = 29.5 bits (67), Expect = 6.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 6 QAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDV-MVAGGME 64
A L AP V+F S +TV+ G A + L LGH+ + VAG E
Sbjct: 70 DAALAAAPADVPVVFVDGSPSPRVSTVSVDQEGG--ARLATEHLLELGHRTIAHVAGPEE 127
Query: 65 SMS 67
+S
Sbjct: 128 WLS 130
Score = 29.5 bits (67), Expect = 6.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 434 QAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDV-MVAGGME 492
A L AP V+F S +TV+ G A + L LGH+ + VAG E
Sbjct: 70 DAALAAAPADVPVVFVDGSPSPRVSTVSVDQEGG--ARLATEHLLELGHRTIAHVAGPEE 127
Query: 493 SMS 495
+S
Sbjct: 128 WLS 130
>gnl|CDD|237493 PRK13762, PRK13762, tRNA-modifying enzyme; Provisional.
Length = 322
Score = 29.5 bits (67), Expect = 6.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 348 IALISCPTLYPKIRELAPDAKASRNFASKPGDVFIVS-GSRTPM 390
I+L PTLYP + EL + R F F+V+ G+R +
Sbjct: 135 ISLSGEPTLYPYLPELI-EEFHKRGFT-----TFLVTNGTRPDV 172
>gnl|CDD|179086 PRK00683, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase; Provisional.
Length = 418
Score = 29.8 bits (67), Expect = 7.4
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 695 LSEEAVCRAGKEGSI-ALISCPTLYPKIRELAPDAKDVPRELSAHYDLVVLDPPFLSDEC 753
L+++ V G + S+ AL SCP ++ + E A E DLVV P +
Sbjct: 22 LAQKGVYVIGVDKSLEALQSCPYIHERYLENA-------EEFPEQVDLVVRSPGIKKEHP 74
Query: 754 LTKAAVTAKLPL 765
+AA+ + +P+
Sbjct: 75 WVQAAIASHIPV 86
>gnl|CDD|223816 COG0745, OmpR, Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription].
Length = 229
Score = 29.2 bits (66), Expect = 7.5
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 723 ELAPDAKDVPRELSAHYDLVVLD 745
++A D ++ DLV+LD
Sbjct: 28 DVAADGEEALEAAREQPDLVLLD 50
>gnl|CDD|131378 TIGR02325, C_P_lyase_phnF, phosphonates metabolism transcriptional
regulator PhnF. All members of the seed alignment for
this family are predicted helix-turn-helix
transcriptional regulatory proteins of the broader gntR
and are found associated with genes for the import and
degradation of phosphonates and/or related compounds
(e.g. phosphonites) with a direct C-P bond [Transport
and binding proteins, Anions, Regulatory functions, DNA
interactions].
Length = 238
Score = 29.0 bits (65), Expect = 7.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 210 EAVRKFNAKPLARIIAYFDAATEPIDFPIAPAFA----IPTLLKNGGVA 254
E +RK + +PL R +F AA P I A+A I L+ GVA
Sbjct: 130 ETLRKADGRPLCRATTWFPAARFP---GIGQAYAASGSITDALREQGVA 175
>gnl|CDD|181173 PRK07937, PRK07937, lipid-transfer protein; Provisional.
Length = 352
Score = 29.3 bits (66), Expect = 8.1
Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 22/123 (17%)
Query: 199 DGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI-----DFPIAPAFAIPT-LLKNGG 252
DGAAA VL + R+ +P A I + E D +P+ A+ G
Sbjct: 206 DGAAAVVLAAGDRARELRERP-AWITG-IEHRIESPSLGARDLTRSPSTALAAEAATGGD 263
Query: 253 VAKQDVALWEINEAFS--VVVLANIKKLDIDPSKVNVHGGAVSLGHP--------IGMSG 302
DVA E++ F+ ++L L D +KVN GGA++ +P IG +
Sbjct: 264 AGGVDVA--ELHAPFTHQELILREALGLG-DKTKVNPSGGALA-ANPMFAAGLERIGEAA 319
Query: 303 ARI 305
I
Sbjct: 320 RHI 322
>gnl|CDD|223730 COG0657, Aes, Esterase/lipase [Lipid metabolism].
Length = 312
Score = 29.1 bits (65), Expect = 8.8
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 17/79 (21%)
Query: 213 RKFNAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVV-- 270
+ + +AR+ A A +D+ +AP P + +A++
Sbjct: 95 LRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPA---------------ALEDAYAAYRW 139
Query: 271 VLANIKKLDIDPSKVNVHG 289
+ AN +L IDPS++ V G
Sbjct: 140 LRANAAELGIDPSRIAVAG 158
>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 414
Score = 29.2 bits (65), Expect = 9.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 32 VNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 67
++ C +G+ I A++ ++ G D MVAGG E S
Sbjct: 160 ISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKAS 195
Score = 29.2 bits (65), Expect = 9.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 460 VNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMS 495
++ C +G+ I A++ ++ G D MVAGG E S
Sbjct: 160 ISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKAS 195
>gnl|CDD|223531 COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an
ATPase [Cell motility].
Length = 262
Score = 29.2 bits (66), Expect = 9.4
Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 697 EEAVCRAGKEGSIALISCPTLYPKIRELAPDA-KDVPRELSAHYDLVVLD-PPFLSDE 752
E+ + ++G + ++ + + +L P+ +DV +EL YD +++D LS +
Sbjct: 71 EDIIYETPQDG-LYVLPGGSGLEDLAKLDPEDLEDVIKELEELYDYILIDTGAGLSRD 127
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.317 0.132 0.381
Gapped
Lambda K H
0.267 0.0754 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 40,461,606
Number of extensions: 3989287
Number of successful extensions: 3889
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3694
Number of HSP's successfully gapped: 188
Length of query: 814
Length of database: 10,937,602
Length adjustment: 105
Effective length of query: 709
Effective length of database: 6,280,432
Effective search space: 4452826288
Effective search space used: 4452826288
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.0 bits)