RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12877
(814 letters)
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera
[TaxId: 350]}
Length = 268
Score = 247 bits (632), Expect = 8e-77
Identities = 110/270 (40%), Positives = 158/270 (58%), Gaps = 6/270 (2%)
Query: 375 SKPGDVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQ 434
S P + I S +RT +GSF + + A +LGA I + +++A + +V EV +G V
Sbjct: 1 STP-SIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLP 59
Query: 435 AGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESM 494
AG GQ P RQA + AG+P+ +N++ SG++A+ L Q ++ G ++VAGGMESM
Sbjct: 60 AGEGQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESM 119
Query: 495 SNVPFYLN-RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEYA 553
S P + RG K G +ID ++ DGL+D + HMG AEN AK++ +SRDEQD +A
Sbjct: 120 SMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFA 179
Query: 554 LSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKINFEKFKSLATVFQK 612
++S K+ A K+ F +IVP + RKG DI V+ DE + L F
Sbjct: 180 VASQNKAEAAQKDGRFKDEIVPFIVKGRKG--DITVDADEYIRHGATLDSMAKLRPAF-D 236
Query: 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRK 642
+ GTVTAGNAS LNDGAAA +LM+E +
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASR 266
Score = 188 bits (478), Expect = 7e-55
Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 5/216 (2%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
+G V AG GQ P RQA + AG+P+ +N++ SG++A+ L Q ++ G ++VA
Sbjct: 54 LGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVA 113
Query: 61 GGMESMSNVPFYLN-RGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRD 119
GGMESMS P + RG K G +ID ++ DGL+D + HMG AEN AK++ +SRD
Sbjct: 114 GGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRD 173
Query: 120 EQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKINFEKFKSL 178
EQD +A++S K+ A K+ F +IVP + RKG DI V+ DE + L
Sbjct: 174 EQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKG--DITVDADEYIRHGATLDSMAKL 231
Query: 179 ATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRK 214
F + GTVTAGNAS LNDGAAA +LM+E +
Sbjct: 232 RPAF-DKEGTVTAGNASGLNDGAAAALLMSEAEASR 266
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus
thermophilus [TaxId: 274]}
Length = 273
Score = 204 bits (520), Expect = 9e-61
Identities = 91/275 (33%), Positives = 149/275 (54%), Gaps = 12/275 (4%)
Query: 379 DVFIVSGSRTPMGSFRSSLVSLSATKLGAVAIESAIQKANMDKSDVQEVYMGNVCQAGLG 438
+ +IV RTP+G +L S+ L A A+ + ++ + K +V++VY G QAG
Sbjct: 1 EAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGED 60
Query: 439 QA-PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSNV 497
R A++ AG P TVN++C SG++A+ A++ + G V + G+ESMS
Sbjct: 61 NRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRA 120
Query: 498 PFYLN--RGETKYGGMNLIDG-----IVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQD 550
P+ + G + + D V + +Y MG AEN A+ + I R+EQD
Sbjct: 121 PYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQD 180
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKINFEKFKSLATV 609
+AL S++K+ A++ F ++VPV + + K +I+V +DE + + EK +L V
Sbjct: 181 RFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKE--EILVEQDEGPRRDTSLEKLAALRPV 238
Query: 610 FQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN 644
F +E GTVTAGN+S LNDGAAA +L++++ +
Sbjct: 239 F-REGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHG 272
Score = 144 bits (365), Expect = 2e-39
Identities = 76/225 (33%), Positives = 121/225 (53%), Gaps = 12/225 (5%)
Query: 1 MGNVCQAGLGQA-PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMV 59
G QAG R A++ AG P TVN++C SG++A+ A++ + G V +
Sbjct: 51 AGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYI 110
Query: 60 AGGMESMSNVPFYLN--RGETKYGGMNLIDG-----IVYDGLSDVYNKIHMGNCAENTAK 112
G+ESMS P+ + G + + D V + +Y MG AEN A+
Sbjct: 111 GSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAE 170
Query: 113 KFNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEE-YKKIN 171
+ I R+EQD +AL S++K+ A++ F ++VPV + + K +I+V +DE + +
Sbjct: 171 MYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKE--EILVEQDEGPRRDTS 228
Query: 172 FEKFKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFN 216
EK +L VF +E GTVTAGN+S LNDGAAA +L++++ +
Sbjct: 229 LEKLAALRPVF-REGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHG 272
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 269
Score = 175 bits (443), Expect = 4e-50
Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 15/272 (5%)
Query: 376 KPGDVFIVSGSRTPMG-SFRSSLVSLSATKLGAVAIESAIQKA----NMDKSDVQEVYMG 430
+P DV IV+ +R+ +G F+ + ++ L + I + D + ++EV G
Sbjct: 8 RPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACG 67
Query: 431 NVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGG 490
NV G G R A + +G+P ST +N+ C+SG+ A+ + + +G D+ +A G
Sbjct: 68 NVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALG 127
Query: 491 MESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQD 550
+ESM+N +N + I MG EN A F ISR +QD
Sbjct: 128 VESMTNNYKNVNPLGMISSEE------LQKNREAKKCLIPMGITNENVAANFKISRKDQD 181
Query: 551 EYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVF 610
E+A +SY+K+ A +F +I+P+ +P I +++ + E S+ F
Sbjct: 182 EFAANSYQKAYKAKNEGLFEDEILPIKLPDG----SICQSDEGPRPNVTAESLSSIRPAF 237
Query: 611 QKENGTVTAGNASTLNDGAAACVLMTEEAVRK 642
K+ GT TAGNAS ++DG A +L +
Sbjct: 238 IKDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269
Score = 126 bits (317), Expect = 5e-33
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 10/214 (4%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
GNV G G R A + +G+P ST +N+ C+SG+ A+ + + +G D+ +A
Sbjct: 66 CGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLA 125
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
G+ESM+N +N + I MG EN A F ISR +
Sbjct: 126 LGVESMTNNYKNVNPLGMISSEE------LQKNREAKKCLIPMGITNENVAANFKISRKD 179
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QDE+A +SY+K+ A +F +I+P+ +P I +++ + E S+
Sbjct: 180 QDEFAANSYQKAYKAKNEGLFEDEILPIKLPDG----SICQSDEGPRPNVTAESLSSIRP 235
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRK 214
F K+ GT TAGNAS ++DG A +L +
Sbjct: 236 AFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit
(3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId:
296]}
Length = 262
Score = 163 bits (412), Expect = 6e-46
Identities = 72/270 (26%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 376 KPGDVFIVSGSRTPMGSFR-SSLVSLSATKLGAVAIESAIQK-ANMDKSDVQEV-YMGNV 432
P DV IV RTPMG + + A + A I +++ + +D +V++V +
Sbjct: 3 NPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVN 62
Query: 433 CQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGME 492
G R A + +P ++ TV+++C S M A+ A+Q + G+ DV V GG+E
Sbjct: 63 QTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVE 122
Query: 493 SMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDEQDEY 552
M +V M+ +D + L MG AE K ISR++QD +
Sbjct: 123 HMGHVSM-----------MHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAF 171
Query: 553 ALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLATVFQK 612
A+ S++ + A F +I+P+ G I ++ E +L F
Sbjct: 172 AVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNP 231
Query: 613 ENGTVTAGNASTLNDGAAACVLMTEEAVRK 642
+ GTVTAG +S + DGA+ ++M+ + +
Sbjct: 232 KGGTVTAGTSSQITDGASCMIVMSAQRAKD 261
Score = 118 bits (296), Expect = 2e-30
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 1 MGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVA 60
G R A + +P ++ TV+++C S M A+ A+Q + G+ DV V
Sbjct: 59 GCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVV 118
Query: 61 GGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKKFNISRDE 120
GG+E M +V M+ +D + L MG AE K ISR++
Sbjct: 119 GGVEHMGHVSM-----------MHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQ 167
Query: 121 QDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFEKFKSLAT 180
QD +A+ S++ + A F +I+P+ G I ++ E +L
Sbjct: 168 QDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKP 227
Query: 181 VFQKENGTVTAGNASTLNDGAAACVLMTEEAVRK 214
F + GTVTAG +S + DGA+ ++M+ + +
Sbjct: 228 AFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKD 261
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea
ramigera [TaxId: 350]}
Length = 124
Score = 109 bits (273), Expect = 8e-29
Identities = 40/97 (41%), Positives = 54/97 (55%)
Query: 218 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKK 277
+PL RI+++ +P P A L+ G D+ L E NEAF+ A K
Sbjct: 2 QPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKD 61
Query: 278 LDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
L DPS VNV+GGA+++GHPIG SGARI+ L +K
Sbjct: 62 LGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMK 98
Score = 41.5 bits (97), Expect = 5e-05
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 646 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQLSQFW--YDENTTQRLSEEAVCR 702
+PL RI+++ +P P A L+ G + N AV +
Sbjct: 2 QPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNK 60
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 124
Score = 105 bits (262), Expect = 3e-27
Identities = 45/104 (43%), Positives = 61/104 (58%)
Query: 216 NAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANI 275
N L R I + P + PA+AIP +L+ G+ QD+ ++EINEAF+ L I
Sbjct: 2 NLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCI 61
Query: 276 KKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALKSGQKG 319
KL ID +KVN GGA++LGHP+G +GAR V + LK Q G
Sbjct: 62 HKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQIG 105
Score = 38.4 bits (89), Expect = 5e-04
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 644 NAKPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQLSQFW 686
N L R I + P + PA+AIP +L+ G Q
Sbjct: 2 NLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDI 44
>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus
thermophilus [TaxId: 274]}
Length = 125
Score = 101 bits (252), Expect = 7e-26
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 218 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLANIKK 277
+PLAR+ A A P I P A L+ G++ D+ L E+NEAF+ LA +++
Sbjct: 1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLRE 60
Query: 278 --LDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
L ++ ++N +GGA++LGHP+G SGARI+ L H ++
Sbjct: 61 WSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMR 99
Score = 41.1 bits (96), Expect = 6e-05
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 646 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQLSQFW 686
+PLAR+ A A P I P A L+ G
Sbjct: 1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDL 41
>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit
(3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId:
296]}
Length = 128
Score = 86.6 bits (214), Expect = 8e-21
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 218 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGVAKQDVALWEINEAFSVVVLA---N 274
+PLA I + A +P P A LK G+ D+ E+NEAF+ L +
Sbjct: 3 EPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKD 62
Query: 275 IKKLDIDPSKVNVHGGAVSLGHPIGMSGARIVIHLCHALK 314
+K LD KVN+HGGA++LGHP G SGARI L + +K
Sbjct: 63 LKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 102
Score = 38.5 bits (89), Expect = 6e-04
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 646 KPLARIIAYFDAATEPIDFPIAPAFAIPTLLKNGGQLSQFW 686
+PLA I + A +P P A LK G
Sbjct: 3 EPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADI 43
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative
beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor
[TaxId: 1902]}
Length = 208
Score = 37.8 bits (86), Expect = 0.002
Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Query: 418 NMDKSDVQEVYMGNVCQAGLGQAPCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQT 477
K + +V ++ I + + A G+ A+ A +T
Sbjct: 114 EFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRT 173
Query: 478 LSLGHQDVMVAGGMESMSN 496
+ G ++V+GG++S +
Sbjct: 174 IRRG-TPLVVSGGVDSALD 191
Score = 37.8 bits (86), Expect = 0.003
Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 13 PCRQAVIFAGLPKSTVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68
I + + A G+ A+ A +T+ G ++V+GG++S +
Sbjct: 137 AVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALD 191
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative
beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor
[TaxId: 1902]}
Length = 216
Score = 37.3 bits (85), Expect = 0.004
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 26 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68
T V+ C SG+ ++ A + + G DVM AG ++
Sbjct: 157 EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT 199
Score = 37.3 bits (85), Expect = 0.004
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 454 STVCTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
T V+ C SG+ ++ A + + G DVM AG ++
Sbjct: 157 EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT 199
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus
thermophilus [TaxId: 274]}
Length = 249
Score = 35.8 bits (82), Expect = 0.015
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 29 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 68
+TV CA+G A+ A + + LG D+++AGG E+
Sbjct: 154 SSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT 193
Score = 35.8 bits (82), Expect = 0.015
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 457 CTTVNKVCASGMKAIMLASQTLSLGHQDVMVAGGMESMSN 496
+TV CA+G A+ A + + LG D+++AGG E+
Sbjct: 154 SSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT 193
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A
{Acidaminococcus fermentans [TaxId: 905]}
Length = 259
Score = 31.0 bits (69), Expect = 0.43
Identities = 18/123 (14%), Positives = 35/123 (28%)
Query: 54 HQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKK 113
G NV ++ G +++ +G + + + G + A
Sbjct: 81 ELSCHAMGASFIWPNVHTVIDIGGQDVKVIHVENGTMTNFQMNDKCAAGTGRFLDVMANI 140
Query: 114 FNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFE 173
+ + E S K+ A + VF+ V + + K DII
Sbjct: 141 LEVKVSDLAELGAKSTKRVAISSTCTVFAESEVISQLSKGTDKIDIIAGIHRSVASRVIG 200
Query: 174 KFK 176
Sbjct: 201 LAN 203
Score = 31.0 bits (69), Expect = 0.43
Identities = 18/123 (14%), Positives = 35/123 (28%)
Query: 482 HQDVMVAGGMESMSNVPFYLNRGETKYGGMNLIDGIVYDGLSDVYNKIHMGNCAENTAKK 541
G NV ++ G +++ +G + + + G + A
Sbjct: 81 ELSCHAMGASFIWPNVHTVIDIGGQDVKVIHVENGTMTNFQMNDKCAAGTGRFLDVMANI 140
Query: 542 FNISRDEQDEYALSSYKKSADAYKNNVFSSQIVPVSIPQRKGKADIIVNEDEEYKKINFE 601
+ + E S K+ A + VF+ V + + K DII
Sbjct: 141 LEVKVSDLAELGAKSTKRVAISSTCTVFAESEVISQLSKGTDKIDIIAGIHRSVASRVIG 200
Query: 602 KFK 604
Sbjct: 201 LAN 203
>d2z5fa_ c.37.1.5 (A:) Thyroid hormone sulfotransferase Sult1b1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 30.5 bits (68), Expect = 0.78
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 357 YPKIRELAPDAKASRNFASKPGDVFIVS 384
YP A + + F S+P D+ I +
Sbjct: 15 YPMTCAFASNWEKIEQFHSRPDDIVIAT 42
>d1r4qa_ d.165.1.2 (A:) Shiga toxin, A-chain {Shigella dysenteriae,
toxin I [TaxId: 622]}
Length = 289
Score = 30.3 bits (68), Expect = 0.79
Identities = 16/91 (17%), Positives = 26/91 (28%), Gaps = 5/91 (5%)
Query: 603 FKSLATVFQKENGTVTAGNASTLNDGAAACVLMTEEAVRKFNAKPLARIIAYFDAATEPI 662
SL T + ++ V +T EA+R F + + R
Sbjct: 132 RHSLTTSYLDLMSHSGTSLTQSVARAMLRFVTVTAEALR-F--RQIQRGFRTTLDDLSGR 188
Query: 663 DFPIAPAFAIPTLLKNGGQLSQFWYDENTTQ 693
+ L N G+LS D +
Sbjct: 189 SY--VMTAEDVDLTLNWGRLSSVLPDYHGQD 217
>d1nbwa2 c.55.1.6 (A:2-91,A:257-405) ATPase domain of the glycerol
dehydratase reactivase alpha subunit {Klebsiella
pneumoniae [TaxId: 573]}
Length = 239
Score = 29.7 bits (67), Expect = 1.1
Identities = 13/81 (16%), Positives = 24/81 (29%), Gaps = 18/81 (22%)
Query: 243 AIPTLLKNGGVAKQDVALWEINEAFSVV-------VLANIKKLDIDPSK----------- 284
A+ L + DV+ +NEA V+ + I+ I
Sbjct: 51 ALEQALAKTPWSMSDVSRIYLNEAAPVIGDVAMETITETIQSRVIPAGNLYISGEKRRGE 110
Query: 285 VNVHGGAVSLGHPIGMSGARI 305
+V GA ++ +
Sbjct: 111 ADVAEGAEAIMQAMSACAPVR 131
>d1fmja_ c.37.1.5 (A:) Retinol dehydratase {Fall armyworm
(Spodoptera frugiperda) [TaxId: 7108]}
Length = 342
Score = 30.0 bits (66), Expect = 1.3
Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Query: 356 LYPKIRELAPDAKASRNFASKPGDVFIVS 384
+Y + A + N +P DVF+ S
Sbjct: 38 VYRPYLKDAANI---YNMPLRPTDVFVAS 63
>d1q44a_ c.37.1.5 (A:) Putative steroid sulfotransferase rarO47
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 320
Score = 27.5 bits (60), Expect = 6.8
Identities = 4/16 (25%), Positives = 9/16 (56%)
Query: 369 ASRNFASKPGDVFIVS 384
+ F +K D+ +V+
Sbjct: 52 CQKRFEAKDSDIILVT 67
>d1ls6a_ c.37.1.5 (A:) Aryl sulfotransferase sult1a {Human (Homo
sapiens) [TaxId: 9606]}
Length = 288
Score = 27.5 bits (60), Expect = 7.1
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 357 YPKIRELAPDAKASRNFASKPGDVFIVS 384
P I+ A ++F ++P D+ I +
Sbjct: 11 VPLIKYFAEALGPLQSFQARPDDLLIST 38
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.381
Gapped
Lambda K H
0.267 0.0488 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,866,730
Number of extensions: 133393
Number of successful extensions: 401
Number of sequences better than 10.0: 1
Number of HSP's gapped: 387
Number of HSP's successfully gapped: 30
Length of query: 814
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 721
Effective length of database: 1,130,706
Effective search space: 815239026
Effective search space used: 815239026
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.3 bits)